locus-tag class description AM2010_1 PF08299 Bacterial dnaA protein helix-turn-helix AM2010_1 PF00308 Bacterial dnaA protein AM2010_1 PF11638 DnaA N-terminal domain AM2010_100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM2010_100 PF00460 Flagella basal body rod protein AM2010_1000 PF01588 Putative tRNA binding domain AM2010_1001 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM2010_1001 PF00364 Biotin-requiring enzyme AM2010_1001 PF00289 Biotin carboxylase, N-terminal domain AM2010_1001 PF02785 Biotin carboxylase C-terminal domain AM2010_1002 PF07007 Lysozyme inhibitor LprI AM2010_1003 PF01053 Cys/Met metabolism PLP-dependent enzyme AM2010_1004 PF04055 Radical SAM superfamily AM2010_1004 PF06968 Biotin and Thiamin Synthesis associated domain AM2010_1007 PF00378 Enoyl-CoA hydratase/isomerase AM2010_1009 PF01039 Carboxyl transferase domain AM2010_101 PF00669 Bacterial flagellin N-terminal helical region AM2010_1010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM2010_1010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM2010_1012 PF00271 Helicase conserved C-terminal domain AM2010_1012 PF00270 DEAD/DEAH box helicase AM2010_1013 PF08447 PAS fold AM2010_1013 PF13426 PAS domain AM2010_1013 PF07536 HWE histidine kinase AM2010_1015 PF00342 Phosphoglucose isomerase AM2010_1016 PF10502 Signal peptidase, peptidase S26 AM2010_1017 PF14622 Ribonuclease-III-like AM2010_1017 PF00035 Double-stranded RNA binding motif AM2010_1018 PF01926 50S ribosome-binding GTPase AM2010_1018 PF07650 KH domain AM2010_102 PF01618 MotA/TolQ/ExbB proton channel family AM2010_1020 PF01751 Toprim domain AM2010_1020 PF01396 Topoisomerase DNA binding C4 zinc finger AM2010_1020 PF13368 Topoisomerase C-terminal repeat AM2010_1020 PF01131 DNA topoisomerase AM2010_1022 PF17782 DprA winged helix domain AM2010_1022 PF02481 DNA recombination-mediator protein A AM2010_1023 PF02660 Glycerol-3-phosphate acyltransferase AM2010_1024 PF01177 Asp/Glu/Hydantoin racemase AM2010_1025 PF00155 Aminotransferase class I and II AM2010_1027 PF00209 Sodium:neurotransmitter symporter family AM2010_1028 PF02548 Ketopantoate hydroxymethyltransferase AM2010_103 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM2010_103 PF00691 OmpA family AM2010_1032 PF00072 Response regulator receiver domain AM2010_1032 PF02954 Bacterial regulatory protein, Fis family AM2010_1032 PF00158 Sigma-54 interaction domain AM2010_1033 PF00512 His Kinase A (phospho-acceptor) domain AM2010_1033 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_1033 PF09456 RcsC Alpha-Beta-Loop (ABL) AM2010_1033 PF00072 Response regulator receiver domain AM2010_1034 PF02397 Bacterial sugar transferase AM2010_1035 PF01381 Helix-turn-helix AM2010_1035 PF09856 Predicted transcriptional regulator (DUF2083) AM2010_1035 PF06114 IrrE N-terminal-like domain AM2010_1036 PF00463 Isocitrate lyase family AM2010_1041 PF00459 Inositol monophosphatase family AM2010_1043 PF01132 Elongation factor P (EF-P) OB domain AM2010_1043 PF09285 Elongation factor P, C-terminal AM2010_1043 PF08207 Elongation factor P (EF-P) KOW-like domain AM2010_1046 PF02581 Thiamine monophosphate synthase AM2010_1048 PF00274 Fructose-bisphosphate aldolase class-I AM2010_1051 PF00162 Phosphoglycerate kinase AM2010_1052 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM2010_1052 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM2010_1053 PF02780 Transketolase, C-terminal domain AM2010_1053 PF02779 Transketolase, pyrimidine binding domain AM2010_1053 PF00456 Transketolase, thiamine diphosphate binding domain AM2010_1056 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM2010_1059 PF00364 Biotin-requiring enzyme AM2010_1059 PF02817 e3 binding domain AM2010_1059 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM2010_1060 PF02780 Transketolase, C-terminal domain AM2010_1060 PF02779 Transketolase, pyrimidine binding domain AM2010_1061 PF00676 Dehydrogenase E1 component AM2010_1061 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal AM2010_1062 PF00303 Thymidylate synthase AM2010_1063 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM2010_1064 PF17191 RecG wedge domain AM2010_1064 PF00270 DEAD/DEAH box helicase AM2010_1064 PF00271 Helicase conserved C-terminal domain AM2010_1066 PF02559 CarD-like/TRCF domain AM2010_1066 PF17757 UvrB interaction domain AM2010_1066 PF03461 TRCF domain AM2010_1066 PF00270 DEAD/DEAH box helicase AM2010_1066 PF00271 Helicase conserved C-terminal domain AM2010_1067 PF00990 Diguanylate cyclase, GGDEF domain AM2010_1067 PF03707 Bacterial signalling protein N terminal repeat AM2010_1067 PF00563 EAL domain AM2010_1068 PF01513 ATP-NAD kinase AM2010_1070 PF07516 SecA Wing and Scaffold domain AM2010_1070 PF02810 SEC-C motif AM2010_1070 PF01043 SecA preprotein cross-linking domain AM2010_1070 PF07517 SecA DEAD-like domain AM2010_1072 PF01960 ArgJ family AM2010_1073 PF00459 Inositol monophosphatase family AM2010_1074 PF00085 Thioredoxin AM2010_1075 PF13361 UvrD-like helicase C-terminal domain AM2010_1075 PF00580 UvrD/REP helicase N-terminal domain AM2010_1075 PF12705 PD-(D/E)XK nuclease superfamily AM2010_1076 PF12705 PD-(D/E)XK nuclease superfamily AM2010_1077 PF12804 MobA-like NTP transferase domain AM2010_1078 PF01636 Phosphotransferase enzyme family AM2010_1079 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM2010_1080 PF00512 His Kinase A (phospho-acceptor) domain AM2010_1080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_1081 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM2010_1081 PF05221 S-adenosyl-L-homocysteine hydrolase AM2010_1082 PF00462 Glutaredoxin AM2010_1082 PF08534 Redoxin AM2010_1083 PF03061 Thioesterase superfamily AM2010_1084 PF01227 GTP cyclohydrolase I AM2010_1089 PF08267 Cobalamin-independent synthase, N-terminal domain AM2010_1089 PF01717 Cobalamin-independent synthase, Catalytic domain AM2010_109 PF00501 AMP-binding enzyme AM2010_1092 PF00175 Oxidoreductase NAD-binding domain AM2010_1092 PF00970 Oxidoreductase FAD-binding domain AM2010_1093 PF01638 HxlR-like helix-turn-helix AM2010_1095 PF00043 Glutathione S-transferase, C-terminal domain AM2010_1095 PF02798 Glutathione S-transferase, N-terminal domain AM2010_1096 PF07237 Protein of unknown function (DUF1428) AM2010_1097 PF07237 Protein of unknown function (DUF1428) AM2010_1104 PF00226 DnaJ domain AM2010_1106 PF02678 Pirin AM2010_1106 PF05726 Pirin C-terminal cupin domain AM2010_1108 PF00561 alpha/beta hydrolase fold AM2010_1109 PF07715 TonB-dependent Receptor Plug Domain AM2010_1109 PF00593 TonB dependent receptor AM2010_1111 PF01634 ATP phosphoribosyltransferase AM2010_1112 PF00815 Histidinol dehydrogenase AM2010_1113 PF01029 NusB family AM2010_1114 PF02769 AIR synthase related protein, C-terminal domain AM2010_1114 PF00586 AIR synthase related protein, N-terminal domain AM2010_1117 PF03030 Inorganic H+ pyrophosphatase AM2010_1121 PF00990 Diguanylate cyclase, GGDEF domain AM2010_1121 PF00563 EAL domain AM2010_1121 PF13426 PAS domain AM2010_1123 PF08459 UvrC Helix-hairpin-helix N-terminal AM2010_1123 PF01541 GIY-YIG catalytic domain AM2010_1123 PF02151 UvrB/uvrC motif AM2010_1127 PF01176 Translation initiation factor 1A / IF-1 AM2010_1128 PF02545 Maf-like protein AM2010_1135 PF06421 GTP-binding protein LepA C-terminus AM2010_1135 PF00679 Elongation factor G C-terminus AM2010_1135 PF00009 Elongation factor Tu GTP binding domain AM2010_1136 PF00563 EAL domain AM2010_1136 PF00990 Diguanylate cyclase, GGDEF domain AM2010_1136 PF13188 PAS domain AM2010_1136 PF03707 Bacterial signalling protein N terminal repeat AM2010_1138 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM2010_1139 PF07969 Amidohydrolase family AM2010_114 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM2010_1140 PF02768 DNA polymerase III beta subunit, C-terminal domain AM2010_1140 PF00712 DNA polymerase III beta subunit, N-terminal domain AM2010_1140 PF02767 DNA polymerase III beta subunit, central domain AM2010_1142 PF00698 Acyl transferase domain AM2010_1144 PF00121 Triosephosphate isomerase AM2010_1147 PF09992 Phosphodiester glycosidase AM2010_1148 PF00561 alpha/beta hydrolase fold AM2010_1149 PF00117 Glutamine amidotransferase class-I AM2010_1150 PF02885 Glycosyl transferase family, helical bundle domain AM2010_1150 PF00591 Glycosyl transferase family, a/b domain AM2010_1151 PF00809 Pterin binding enzyme AM2010_1154 PF18755 Restriction Enzyme Adenine Methylase Associated AM2010_1154 PF01555 DNA methylase AM2010_1155 PF01351 Ribonuclease HII AM2010_1156 PF07995 Glucose / Sorbosone dehydrogenase AM2010_1159 PF00293 NUDIX domain AM2010_116 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM2010_116 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM2010_1160 PF12627 Probable RNA and SrmB- binding site of polymerase A AM2010_1160 PF01743 Poly A polymerase head domain AM2010_1160 PF12626 Polymerase A arginine-rich C-terminus AM2010_1162 PF00521 DNA gyrase/topoisomerase IV, subunit A AM2010_1162 PF03989 DNA gyrase C-terminal domain, beta-propeller AM2010_1163 PF01965 DJ-1/PfpI family AM2010_1164 PF00360 Phytochrome region AM2010_1164 PF08446 PAS fold AM2010_1164 PF01590 GAF domain AM2010_1164 PF00512 His Kinase A (phospho-acceptor) domain AM2010_1164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_1165 PF12697 Alpha/beta hydrolase family AM2010_1166 PF00111 2Fe-2S iron-sulfur cluster binding domain AM2010_1167 PF00266 Aminotransferase class-V AM2010_1168 PF00266 Aminotransferase class-V AM2010_1169 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM2010_117 PF01037 Lrp/AsnC ligand binding domain AM2010_1175 PF02163 Peptidase family M50 AM2010_1175 PF17820 PDZ domain AM2010_1176 PF00271 Helicase conserved C-terminal domain AM2010_1176 PF00270 DEAD/DEAH box helicase AM2010_1178 PF01565 FAD binding domain AM2010_1178 PF02913 FAD linked oxidases, C-terminal domain AM2010_1181 PF00072 Response regulator receiver domain AM2010_1182 PF00180 Isocitrate/isopropylmalate dehydrogenase AM2010_1183 PF00583 Acetyltransferase (GNAT) family AM2010_1183 PF00795 Carbon-nitrogen hydrolase AM2010_1184 PF01494 FAD binding domain AM2010_1185 PF00999 Sodium/hydrogen exchanger family AM2010_1185 PF02254 TrkA-N domain AM2010_1187 PF02272 DHHA1 domain AM2010_1187 PF01411 tRNA synthetases class II (A) AM2010_1187 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM2010_1189 PF00154 recA bacterial DNA recombination protein AM2010_1192 PF00072 Response regulator receiver domain AM2010_1192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_1192 PF13188 PAS domain AM2010_1192 PF00512 His Kinase A (phospho-acceptor) domain AM2010_1192 PF08448 PAS fold AM2010_1194 PF01668 SmpB protein AM2010_1196 PF00701 Dihydrodipicolinate synthetase family AM2010_1197 PF01464 Transglycosylase SLT domain AM2010_1198 PF01272 Transcription elongation factor, GreA/GreB, C-term AM2010_1198 PF03449 Transcription elongation factor, N-terminal AM2010_120 PF07662 Na+ dependent nucleoside transporter C-terminus AM2010_120 PF07670 Nucleoside recognition AM2010_120 PF01773 Na+ dependent nucleoside transporter N-terminus AM2010_1201 PF04055 Radical SAM superfamily AM2010_1203 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM2010_1204 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM2010_1206 PF00291 Pyridoxal-phosphate dependent enzyme AM2010_1207 PF00290 Tryptophan synthase alpha chain AM2010_1208 PF17848 Acetyl-coA carboxylase zinc finger domain AM2010_1208 PF01039 Carboxyl transferase domain AM2010_1209 PF08245 Mur ligase middle domain AM2010_1209 PF02875 Mur ligase family, glutamate ligase domain AM2010_1210 PF07690 Major Facilitator Superfamily AM2010_1211 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM2010_1211 PF00355 Rieske [2Fe-2S] domain AM2010_1212 PF00849 RNA pseudouridylate synthase AM2010_1212 PF01479 S4 domain AM2010_1216 PF00580 UvrD/REP helicase N-terminal domain AM2010_1216 PF13361 UvrD-like helicase C-terminal domain AM2010_1218 PF01293 Phosphoenolpyruvate carboxykinase AM2010_1219 PF00072 Response regulator receiver domain AM2010_1219 PF00486 Transcriptional regulatory protein, C terminal AM2010_122 PF07715 TonB-dependent Receptor Plug Domain AM2010_122 PF00593 TonB dependent receptor AM2010_1220 PF00512 His Kinase A (phospho-acceptor) domain AM2010_1220 PF13756 Stimulus-sensing domain AM2010_1220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_1220 PF00672 HAMP domain AM2010_1220 PF13755 Sensor N-terminal transmembrane domain AM2010_1221 PF02603 HPr Serine kinase N terminus AM2010_1221 PF07475 HPr Serine kinase C-terminal domain AM2010_1222 PF03668 P-loop ATPase protein family AM2010_1223 PF03610 PTS system fructose IIA component AM2010_1223 PF03830 PTS system sorbose subfamily IIB component AM2010_1224 PF00381 PTS HPr component phosphorylation site AM2010_1225 PF00588 SpoU rRNA Methylase family AM2010_1225 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM2010_1228 PF02646 RmuC family AM2010_1229 PF01327 Polypeptide deformylase AM2010_1230 PF02132 RecR protein AM2010_1230 PF13662 Toprim domain AM2010_1231 PF02911 Formyl transferase, C-terminal domain AM2010_1231 PF00551 Formyl transferase AM2010_1232 PF00561 alpha/beta hydrolase fold AM2010_1233 PF01416 tRNA pseudouridine synthase AM2010_1235 PF17763 Glutaminase/Asparaginase C-terminal domain AM2010_1235 PF00710 Asparaginase, N-terminal AM2010_1237 PF12833 Helix-turn-helix domain AM2010_1237 PF02311 AraC-like ligand binding domain AM2010_1238 PF07859 alpha/beta hydrolase fold AM2010_1239 PF00850 Histone deacetylase domain AM2010_124 PF01050 Mannose-6-phosphate isomerase AM2010_124 PF00483 Nucleotidyl transferase AM2010_1240 PF07715 TonB-dependent Receptor Plug Domain AM2010_1240 PF00593 TonB dependent receptor AM2010_1241 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM2010_1241 PF00326 Prolyl oligopeptidase family AM2010_1243 PF08534 Redoxin AM2010_1244 PF00206 Lyase AM2010_1244 PF14698 Argininosuccinate lyase C-terminal AM2010_1246 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM2010_1246 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM2010_1247 PF14824 Sirohaem biosynthesis protein central AM2010_1247 PF10414 Sirohaem synthase dimerisation region AM2010_1247 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM2010_1249 PF00709 Adenylosuccinate synthetase AM2010_125 PF01238 Phosphomannose isomerase type I AM2010_1250 PF13393 Histidyl-tRNA synthetase AM2010_1251 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM2010_1251 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM2010_1251 PF01842 ACT domain AM2010_1252 PF00266 Aminotransferase class-V AM2010_1253 PF00534 Glycosyl transferases group 1 AM2010_1253 PF13439 Glycosyltransferase Family 4 AM2010_1255 PF03551 Transcriptional regulator PadR-like family AM2010_1256 PF12002 MgsA AAA+ ATPase C terminal AM2010_1256 PF00004 ATPase family associated with various cellular activities (AAA) AM2010_1256 PF16193 AAA C-terminal domain AM2010_1258 PF10415 Fumarase C C-terminus AM2010_1258 PF00206 Lyase AM2010_1259 PF14489 QueF-like protein AM2010_126 PF08884 Flagellin D3 domain AM2010_126 PF00669 Bacterial flagellin N-terminal helical region AM2010_126 PF00700 Bacterial flagellin C-terminal helical region AM2010_126 PF00669 Bacterial flagellin N-terminal helical region AM2010_126 PF00700 Bacterial flagellin C-terminal helical region AM2010_126 PF08884 Flagellin D3 domain AM2010_1267 PF13286 Phosphohydrolase-associated domain AM2010_1267 PF01966 HD domain AM2010_1268 PF01177 Asp/Glu/Hydantoin racemase AM2010_127 PF02954 Bacterial regulatory protein, Fis family AM2010_127 PF00158 Sigma-54 interaction domain AM2010_1271 PF02233 NAD(P) transhydrogenase beta subunit AM2010_1272 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM2010_1273 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM2010_1273 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM2010_1275 PF02954 Bacterial regulatory protein, Fis family AM2010_1275 PF00072 Response regulator receiver domain AM2010_1275 PF00158 Sigma-54 interaction domain AM2010_1277 PF00218 Indole-3-glycerol phosphate synthase AM2010_1278 PF01967 MoaC family AM2010_1279 PF00994 Probable molybdopterin binding domain AM2010_1279 PF03454 MoeA C-terminal region (domain IV) AM2010_1279 PF03453 MoeA N-terminal region (domain I and II) AM2010_128 PF02049 Flagellar hook-basal body complex protein FliE AM2010_1280 PF01726 LexA DNA binding domain AM2010_1280 PF00717 Peptidase S24-like AM2010_1281 PF03772 Competence protein AM2010_1281 PF00753 Metallo-beta-lactamase superfamily AM2010_1282 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM2010_1283 PF00285 Citrate synthase, C-terminal domain AM2010_1285 PF00672 HAMP domain AM2010_1285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_1285 PF00512 His Kinase A (phospho-acceptor) domain AM2010_129 PF08345 Flagellar M-ring protein C-terminal AM2010_129 PF01514 Secretory protein of YscJ/FliF family AM2010_1291 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AM2010_1291 PF12706 Beta-lactamase superfamily domain AM2010_1291 PF17770 Ribonuclease J C-terminal domain AM2010_1292 PF03309 Type III pantothenate kinase AM2010_1293 PF03099 Biotin/lipoate A/B protein ligase family AM2010_1293 PF02237 Biotin protein ligase C terminal domain AM2010_1294 PF00361 Proton-conducting membrane transporter AM2010_1295 PF00361 Proton-conducting membrane transporter AM2010_1295 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AM2010_1296 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM2010_1296 PF00361 Proton-conducting membrane transporter AM2010_1297 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM2010_1298 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM2010_1299 PF12838 4Fe-4S dicluster domain AM2010_130 PF14842 FliG N-terminal domain AM2010_130 PF14841 FliG middle domain AM2010_130 PF01706 FliG C-terminal domain AM2010_1300 PF00146 NADH dehydrogenase AM2010_1302 PF00384 Molybdopterin oxidoreductase AM2010_1302 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM2010_1302 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AM2010_1303 PF10531 SLBB domain AM2010_1303 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM2010_1303 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM2010_1306 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM2010_1307 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM2010_1308 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM2010_1309 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM2010_1310 PF00171 Aldehyde dehydrogenase family AM2010_1311 PF00108 Thiolase, N-terminal domain AM2010_1311 PF02803 Thiolase, C-terminal domain AM2010_1314 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM2010_1314 PF01842 ACT domain AM2010_1314 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM2010_1315 PF00909 Ammonium Transporter Family AM2010_1317 PF08704 tRNA methyltransferase complex GCD14 subunit AM2010_1318 PF00472 RF-1 domain AM2010_1318 PF03462 PCRF domain AM2010_1319 PF00578 AhpC/TSA family AM2010_132 PF18269 T3SS EscN ATPase C-terminal domain AM2010_132 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM2010_1320 PF17092 Penicillin-binding protein OB-like domain AM2010_1320 PF00905 Penicillin binding protein transpeptidase domain AM2010_1320 PF00912 Transglycosylase AM2010_1321 PF11741 AMIN domain AM2010_1321 PF01520 N-acetylmuramoyl-L-alanine amidase AM2010_1322 PF12111 Polyribonucleotide phosphorylase C terminal AM2010_1322 PF10150 Ribonuclease E/G family AM2010_1322 PF00575 S1 RNA binding domain AM2010_1325 PF01820 D-ala D-ala ligase N-terminus AM2010_1325 PF07478 D-ala D-ala ligase C-terminus AM2010_1326 PF13085 2Fe-2S iron-sulfur cluster binding domain AM2010_1328 PF03969 AFG1-like ATPase AM2010_1330 PF00733 Asparagine synthase AM2010_1330 PF13537 Glutamine amidotransferase domain AM2010_1334 PF01522 Polysaccharide deacetylase AM2010_1335 PF13401 AAA domain AM2010_1335 PF01471 Putative peptidoglycan binding domain AM2010_1340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM2010_1340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM2010_1341 PF00550 Phosphopantetheine attachment site AM2010_1341 PF00668 Condensation domain AM2010_1341 PF13193 AMP-binding enzyme C-terminal domain AM2010_1341 PF00501 AMP-binding enzyme AM2010_1343 PF00550 Phosphopantetheine attachment site AM2010_1346 PF05958 tRNA (Uracil-5-)-methyltransferase AM2010_1347 PF01256 Carbohydrate kinase AM2010_1347 PF03853 YjeF-related protein N-terminus AM2010_1349 PF00920 Dehydratase family AM2010_1351 PF08544 GHMP kinases C terminal AM2010_1355 PF00994 Probable molybdopterin binding domain AM2010_1357 PF00892 EamA-like transporter family AM2010_1358 PF01979 Amidohydrolase family AM2010_1363 PF13302 Acetyltransferase (GNAT) domain AM2010_1364 PF01016 Ribosomal L27 protein AM2010_1365 PF00829 Ribosomal prokaryotic L21 protein AM2010_1367 PF02391 MoaE protein AM2010_1369 PF06463 Molybdenum Cofactor Synthesis C AM2010_1369 PF04055 Radical SAM superfamily AM2010_137 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM2010_1373 PF00291 Pyridoxal-phosphate dependent enzyme AM2010_1373 PF14821 Threonine synthase N terminus AM2010_1379 PF00510 Cytochrome c oxidase subunit III AM2010_1380 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AM2010_1382 PF01040 UbiA prenyltransferase family AM2010_1383 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM2010_1384 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM2010_1384 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AM2010_1385 PF00156 Phosphoribosyl transferase domain AM2010_1386 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM2010_1387 PF01648 4'-phosphopantetheinyl transferase superfamily AM2010_1388 PF10502 Signal peptidase, peptidase S26 AM2010_139 PF00813 FliP family AM2010_1391 PF03652 Holliday junction resolvase AM2010_1398 PF00890 FAD binding domain AM2010_1398 PF02910 Fumarate reductase flavoprotein C-term AM2010_1399 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM2010_14 PF17863 AAA lid domain AM2010_14 PF07726 ATPase family associated with various cellular activities (AAA) AM2010_140 PF01313 Bacterial export proteins, family 3 AM2010_1400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM2010_1405 PF00533 BRCA1 C Terminus (BRCT) domain AM2010_1405 PF01653 NAD-dependent DNA ligase adenylation domain AM2010_1405 PF03120 NAD-dependent DNA ligase OB-fold domain AM2010_1405 PF12826 Helix-hairpin-helix motif AM2010_1405 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM2010_1408 PF02463 RecF/RecN/SMC N terminal domain AM2010_1409 PF13525 Outer membrane lipoprotein AM2010_141 PF01311 Bacterial export proteins, family 1 AM2010_1410 PF01472 PUA domain AM2010_1410 PF00696 Amino acid kinase family AM2010_1411 PF03807 NADP oxidoreductase coenzyme F420-dependent AM2010_1411 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM2010_1412 PF00171 Aldehyde dehydrogenase family AM2010_1413 PF01259 SAICAR synthetase AM2010_1415 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AM2010_1417 PF00990 Diguanylate cyclase, GGDEF domain AM2010_1417 PF08448 PAS fold AM2010_1417 PF08447 PAS fold AM2010_1417 PF00563 EAL domain AM2010_142 PF01312 FlhB HrpN YscU SpaS Family AM2010_1420 PF00145 C-5 cytosine-specific DNA methylase AM2010_1424 PF05275 Copper resistance protein B precursor (CopB) AM2010_1425 PF00394 Multicopper oxidase AM2010_1425 PF07731 Multicopper oxidase AM2010_1425 PF07732 Multicopper oxidase AM2010_1426 PF02583 Metal-sensitive transcriptional repressor AM2010_1433 PF09278 MerR, DNA binding AM2010_1433 PF00376 MerR family regulatory protein AM2010_1436 PF02321 Outer membrane efflux protein AM2010_1437 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM2010_1438 PF00873 AcrB/AcrD/AcrF family AM2010_1441 PF01545 Cation efflux family AM2010_1444 PF14480 DNA polymerase III polC-type N-terminus I AM2010_1444 PF02811 PHP domain AM2010_1444 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM2010_1444 PF00929 Exonuclease AM2010_1444 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM2010_1444 PF14579 Helix-hairpin-helix motif AM2010_1444 PF11490 DNA polymerase III polC-type N-terminus II AM2010_1449 PF08722 TnsA endonuclease N terminal AM2010_1449 PF08721 TnsA endonuclease C terminal AM2010_145 PF00072 Response regulator receiver domain AM2010_145 PF00196 Bacterial regulatory proteins, luxR family AM2010_1450 PF00665 Integrase core domain AM2010_1451 PF13401 AAA domain AM2010_1451 PF11426 Tn7 transposition regulator TnsC AM2010_1453 PF01380 SIS domain AM2010_1455 PF00437 Type II/IV secretion system protein AM2010_1456 PF05552 Conserved TM helix AM2010_1457 PF00486 Transcriptional regulatory protein, C terminal AM2010_1457 PF00072 Response regulator receiver domain AM2010_1459 PF00672 HAMP domain AM2010_1459 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_1459 PF00989 PAS fold AM2010_1459 PF00512 His Kinase A (phospho-acceptor) domain AM2010_1463 PF05658 Head domain of trimeric autotransporter adhesin AM2010_1463 PF05662 Coiled stalk of trimeric autotransporter adhesin AM2010_1463 PF03895 YadA-like membrane anchor domain AM2010_1463 PF03895 YadA-like membrane anchor domain AM2010_1463 PF05658 Head domain of trimeric autotransporter adhesin AM2010_1463 PF05662 Coiled stalk of trimeric autotransporter adhesin AM2010_1466 PF09297 NADH pyrophosphatase zinc ribbon domain AM2010_1466 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AM2010_1466 PF00293 NUDIX domain AM2010_1467 PF00144 Beta-lactamase AM2010_1469 PF00633 Helix-hairpin-helix motif AM2010_1469 PF00730 HhH-GPD superfamily base excision DNA repair protein AM2010_1469 PF14815 NUDIX domain AM2010_1473 PF02463 RecF/RecN/SMC N terminal domain AM2010_1474 PF01810 LysE type translocator AM2010_1475 PF01037 Lrp/AsnC ligand binding domain AM2010_1476 PF13411 MerR HTH family regulatory protein AM2010_1477 PF00216 Bacterial DNA-binding protein AM2010_1478 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM2010_1478 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM2010_1479 PF02504 Fatty acid synthesis protein AM2010_1480 PF01783 Ribosomal L32p protein family AM2010_1482 PF00753 Metallo-beta-lactamase superfamily AM2010_1486 PF00171 Aldehyde dehydrogenase family AM2010_1487 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM2010_1487 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM2010_1488 PF01406 tRNA synthetases class I (C) catalytic domain AM2010_149 PF00210 Ferritin-like domain AM2010_1492 PF06213 Cobalamin biosynthesis protein CobT AM2010_1492 PF11775 Cobalamin biosynthesis protein CobT VWA domain AM2010_1493 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM2010_1494 PF18074 Primosomal protein N C-terminal domain AM2010_1494 PF17764 3′ DNA-binding domain (3′BD) AM2010_1494 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM2010_1494 PF00270 DEAD/DEAH box helicase AM2010_1497 PF02805 Metal binding domain of Ada AM2010_1497 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM2010_1497 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM2010_1497 PF12833 Helix-turn-helix domain AM2010_1499 PF02674 Colicin V production protein AM2010_150 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM2010_1500 PF00213 ATP synthase delta (OSCP) subunit AM2010_1501 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM2010_1501 PF00306 ATP synthase alpha/beta chain, C terminal domain AM2010_1501 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM2010_1502 PF00231 ATP synthase AM2010_1504 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM2010_1504 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM2010_1505 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM2010_1506 PF10672 S-adenosylmethionine-dependent methyltransferase AM2010_1506 PF01170 Putative RNA methylase family UPF0020 AM2010_1506 PF02926 THUMP domain AM2010_1509 PF00132 Bacterial transferase hexapeptide (six repeats) AM2010_1509 PF12804 MobA-like NTP transferase domain AM2010_1509 PF14602 Hexapeptide repeat of succinyl-transferase AM2010_151 PF00293 NUDIX domain AM2010_1510 PF13419 Haloacid dehalogenase-like hydrolase AM2010_1511 PF00106 short chain dehydrogenase AM2010_1513 PF00132 Bacterial transferase hexapeptide (six repeats) AM2010_1516 PF02769 AIR synthase related protein, C-terminal domain AM2010_1516 PF00586 AIR synthase related protein, N-terminal domain AM2010_1517 PF00551 Formyl transferase AM2010_1518 PF01474 Class-II DAHP synthetase family AM2010_1519 PF05193 Peptidase M16 inactive domain AM2010_1519 PF00675 Insulinase (Peptidase family M16) AM2010_152 PF00817 impB/mucB/samB family AM2010_152 PF11799 impB/mucB/samB family C-terminal domain AM2010_152 PF11798 IMS family HHH motif AM2010_1520 PF01106 NifU-like domain AM2010_1521 PF00881 Nitroreductase family AM2010_1522 PF00814 Glycoprotease family AM2010_1524 PF05443 ROS/MUCR transcriptional regulator protein AM2010_1525 PF01475 Ferric uptake regulator family AM2010_1526 PF01553 Acyltransferase AM2010_1527 PF00919 Uncharacterized protein family UPF0004 AM2010_1527 PF01938 TRAM domain AM2010_1527 PF04055 Radical SAM superfamily AM2010_1528 PF02562 PhoH-like protein AM2010_1529 PF02130 Uncharacterized protein family UPF0054 AM2010_1530 PF03471 Transporter associated domain AM2010_1530 PF00571 CBS domain AM2010_1531 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM2010_1531 PF03466 LysR substrate binding domain AM2010_1533 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM2010_1534 PF00571 CBS domain AM2010_1534 PF01769 Divalent cation transporter AM2010_1534 PF03448 MgtE intracellular N domain AM2010_1536 PF00672 HAMP domain AM2010_1536 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM2010_154 PF00289 Biotin carboxylase, N-terminal domain AM2010_154 PF00364 Biotin-requiring enzyme AM2010_154 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM2010_154 PF02785 Biotin carboxylase C-terminal domain AM2010_1540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM2010_1541 PF00873 AcrB/AcrD/AcrF family AM2010_1542 PF02321 Outer membrane efflux protein AM2010_1546 PF07715 TonB-dependent Receptor Plug Domain AM2010_1546 PF07660 Secretin and TonB N terminus short domain AM2010_1546 PF00593 TonB dependent receptor AM2010_1548 PF01061 ABC-2 type transporter AM2010_1550 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM2010_1552 PF00528 Binding-protein-dependent transport system inner membrane component AM2010_1553 PF00005 ABC transporter AM2010_1553 PF03459 TOBE domain AM2010_1556 PF00013 KH domain AM2010_1556 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM2010_1556 PF01138 3' exoribonuclease family, domain 1 AM2010_1556 PF03725 3' exoribonuclease family, domain 2 AM2010_1556 PF00575 S1 RNA binding domain AM2010_1557 PF00312 Ribosomal protein S15 AM2010_1558 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM2010_1558 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM2010_1559 PF02163 Peptidase family M50 AM2010_156 PF03641 Possible lysine decarboxylase AM2010_1560 PF00265 Thymidine kinase AM2010_1562 PF03806 AbgT putative transporter family AM2010_1563 PF02033 Ribosome-binding factor A AM2010_1564 PF00117 Glutamine amidotransferase class-I AM2010_1564 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM2010_1565 PF00009 Elongation factor Tu GTP binding domain AM2010_1565 PF11987 Translation-initiation factor 2 AM2010_1565 PF04760 Translation initiation factor IF-2, N-terminal region AM2010_1565 PF08364 Bacterial translation initiation factor IF-2 associated region AM2010_1567 PF00575 S1 RNA binding domain AM2010_1567 PF13184 NusA-like KH domain AM2010_1567 PF08529 NusA N-terminal domain AM2010_1568 PF17384 RimP C-terminal SH3 domain AM2010_1568 PF02576 RimP N-terminal domain AM2010_157 PF04480 Protein of unknown function (DUF559) AM2010_1570 PF02954 Bacterial regulatory protein, Fis family AM2010_1570 PF00158 Sigma-54 interaction domain AM2010_1572 PF04012 PspA/IM30 family AM2010_158 PF01593 Flavin containing amine oxidoreductase AM2010_1580 PF02657 Fe-S metabolism associated domain AM2010_1581 PF01679 Proteolipid membrane potential modulator AM2010_1585 PF00330 Aconitase family (aconitate hydratase) AM2010_1588 PF00694 Aconitase C-terminal domain AM2010_1589 PF08240 Alcohol dehydrogenase GroES-like domain AM2010_1589 PF00698 Acyl transferase domain AM2010_1589 PF08659 KR domain AM2010_1589 PF02801 Beta-ketoacyl synthase, C-terminal domain AM2010_1589 PF00107 Zinc-binding dehydrogenase AM2010_1589 PF16197 Ketoacyl-synthetase C-terminal extension AM2010_1589 PF00109 Beta-ketoacyl synthase, N-terminal domain AM2010_1589 PF00550 Phosphopantetheine attachment site AM2010_1589 PF14765 Polyketide synthase dehydratase AM2010_1592 PF00462 Glutaredoxin AM2010_1595 PF00529 HlyD membrane-fusion protein of T1SS AM2010_1595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM2010_1596 PF00873 AcrB/AcrD/AcrF family AM2010_1597 PF02321 Outer membrane efflux protein AM2010_1598 PF03167 Uracil DNA glycosylase superfamily AM2010_1601 PF07715 TonB-dependent Receptor Plug Domain AM2010_1601 PF00593 TonB dependent receptor AM2010_1602 PF00437 Type II/IV secretion system protein AM2010_1603 PF03743 Bacterial conjugation TrbI-like protein AM2010_1606 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AM2010_1609 PF01551 Peptidase family M23 AM2010_1609 PF10145 Phage-related minor tail protein AM2010_1609 PF01464 Transglycosylase SLT domain AM2010_161 PF00326 Prolyl oligopeptidase family AM2010_161 PF07676 WD40-like Beta Propeller Repeat AM2010_1613 PF00486 Transcriptional regulatory protein, C terminal AM2010_1613 PF00072 Response regulator receiver domain AM2010_1614 PF00925 GTP cyclohydrolase II AM2010_1614 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM2010_1615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_1615 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_1615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1616 PF02515 CoA-transferase family III AM2010_1617 PF00378 Enoyl-CoA hydratase/isomerase AM2010_1618 PF00108 Thiolase, N-terminal domain AM2010_1618 PF02803 Thiolase, C-terminal domain AM2010_1619 PF12697 Alpha/beta hydrolase family AM2010_162 PF01979 Amidohydrolase family AM2010_1620 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_1620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_1620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1621 PF13360 PQQ-like domain AM2010_1623 PF01699 Sodium/calcium exchanger protein AM2010_1625 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM2010_1633 PF08281 Sigma-70, region 4 AM2010_1633 PF04542 Sigma-70 region 2 AM2010_1636 PF12680 SnoaL-like domain AM2010_1636 PF08281 Sigma-70, region 4 AM2010_1636 PF04542 Sigma-70 region 2 AM2010_1637 PF02627 Carboxymuconolactone decarboxylase family AM2010_1639 PF00990 Diguanylate cyclase, GGDEF domain AM2010_164 PF03061 Thioesterase superfamily AM2010_1641 PF07715 TonB-dependent Receptor Plug Domain AM2010_1641 PF00593 TonB dependent receptor AM2010_1642 PF07690 Major Facilitator Superfamily AM2010_1644 PF02515 CoA-transferase family III AM2010_1645 PF00378 Enoyl-CoA hydratase/isomerase AM2010_1647 PF07715 TonB-dependent Receptor Plug Domain AM2010_1647 PF00593 TonB dependent receptor AM2010_1648 PF07690 Major Facilitator Superfamily AM2010_1649 PF00106 short chain dehydrogenase AM2010_165 PF01964 Radical SAM ThiC family AM2010_165 PF13667 ThiC-associated domain AM2010_1650 PF00392 Bacterial regulatory proteins, gntR family AM2010_1650 PF07729 FCD domain AM2010_1652 PF13193 AMP-binding enzyme C-terminal domain AM2010_1652 PF00501 AMP-binding enzyme AM2010_1654 PF02515 CoA-transferase family III AM2010_1655 PF00682 HMGL-like AM2010_1656 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_1656 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_1656 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1658 PF03928 Haem-degrading AM2010_1659 PF00364 Biotin-requiring enzyme AM2010_1659 PF02779 Transketolase, pyrimidine binding domain AM2010_1659 PF02780 Transketolase, C-terminal domain AM2010_1660 PF00676 Dehydrogenase E1 component AM2010_1661 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM2010_1661 PF00364 Biotin-requiring enzyme AM2010_1661 PF02817 e3 binding domain AM2010_1663 PF00743 Flavin-binding monooxygenase-like AM2010_1664 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM2010_1664 PF00205 Thiamine pyrophosphate enzyme, central domain AM2010_1664 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM2010_1665 PF02811 PHP domain AM2010_1665 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM2010_1665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM2010_1665 PF14579 Helix-hairpin-helix motif AM2010_1665 PF01336 OB-fold nucleic acid binding domain AM2010_167 PF13667 ThiC-associated domain AM2010_167 PF01964 Radical SAM ThiC family AM2010_1672 PF00005 ABC transporter AM2010_1672 PF00664 ABC transporter transmembrane region AM2010_1672 PF03412 Peptidase C39 family AM2010_1673 PF00529 HlyD membrane-fusion protein of T1SS AM2010_1674 PF08245 Mur ligase middle domain AM2010_1674 PF02875 Mur ligase family, glutamate ligase domain AM2010_1674 PF01225 Mur ligase family, catalytic domain AM2010_1676 PF01022 Bacterial regulatory protein, arsR family AM2010_1678 PF00378 Enoyl-CoA hydratase/isomerase AM2010_1679 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_1679 PF18158 Adaptive response protein AidB N-terminal domain AM2010_1679 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1680 PF00378 Enoyl-CoA hydratase/isomerase AM2010_1681 PF02515 CoA-transferase family III AM2010_1686 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM2010_1686 PF17287 POTRA domain AM2010_1686 PF08479 POTRA domain, ShlB-type AM2010_1688 PF02472 Biopolymer transport protein ExbD/TolR AM2010_1689 PF01618 MotA/TolQ/ExbB proton channel family AM2010_1692 PF01638 HxlR-like helix-turn-helix AM2010_1693 PF05726 Pirin C-terminal cupin domain AM2010_1693 PF02678 Pirin AM2010_1695 PF07715 TonB-dependent Receptor Plug Domain AM2010_1695 PF00593 TonB dependent receptor AM2010_17 PF00800 Prephenate dehydratase AM2010_1705 PF02824 TGS domain AM2010_1705 PF13291 ACT domain AM2010_1705 PF04607 Region found in RelA / SpoT proteins AM2010_1707 PF01654 Cytochrome bd terminal oxidase subunit I AM2010_1708 PF02322 Cytochrome bd terminal oxidase subunit II AM2010_1712 PF01433 Peptidase family M1 domain AM2010_1713 PF01218 Coproporphyrinogen III oxidase AM2010_1716 PF00707 Translation initiation factor IF-3, C-terminal domain AM2010_1716 PF05198 Translation initiation factor IF-3, N-terminal domain AM2010_1718 PF00939 Sodium:sulfate symporter transmembrane region AM2010_1719 PF01053 Cys/Met metabolism PLP-dependent enzyme AM2010_172 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM2010_1721 PF01556 DnaJ C terminal domain AM2010_1721 PF00684 DnaJ central domain AM2010_1721 PF00226 DnaJ domain AM2010_1723 PF00691 OmpA family AM2010_1724 PF07676 WD40-like Beta Propeller Repeat AM2010_1724 PF04052 TolB amino-terminal domain AM2010_1726 PF02472 Biopolymer transport protein ExbD/TolR AM2010_1727 PF01618 MotA/TolQ/ExbB proton channel family AM2010_1728 PF03061 Thioesterase superfamily AM2010_1729 PF01230 HIT domain AM2010_1730 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM2010_1732 PF00294 pfkB family carbohydrate kinase AM2010_1734 PF07690 Major Facilitator Superfamily AM2010_1736 PF07940 Heparinase II/III-like protein AM2010_1736 PF05426 Alginate lyase AM2010_1737 PF14592 Chondroitinase B AM2010_1738 PF00392 Bacterial regulatory proteins, gntR family AM2010_1738 PF07729 FCD domain AM2010_1743 PF00005 ABC transporter AM2010_1743 PF00664 ABC transporter transmembrane region AM2010_1744 PF01740 STAS domain AM2010_1744 PF00916 Sulfate permease family AM2010_1746 PF07724 AAA domain (Cdc48 subfamily) AM2010_1746 PF00004 ATPase family associated with various cellular activities (AAA) AM2010_1747 PF00227 Proteasome subunit AM2010_1751 PF00436 Single-strand binding protein family AM2010_1752 PF02082 Transcriptional regulator AM2010_1754 PF00334 Nucleoside diphosphate kinase AM2010_1757 PF02789 Cytosol aminopeptidase family, N-terminal domain AM2010_1757 PF00883 Cytosol aminopeptidase family, catalytic domain AM2010_1758 PF03968 OstA-like protein AM2010_1758 PF04453 LPS transport system D AM2010_1759 PF00639 PPIC-type PPIASE domain AM2010_1759 PF09312 SurA N-terminal domain AM2010_1760 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM2010_1761 PF00398 Ribosomal RNA adenine dimethylase AM2010_1762 PF01389 OmpA-like transmembrane domain AM2010_1762 PF00691 OmpA family AM2010_1763 PF01274 Malate synthase AM2010_1764 PF01546 Peptidase family M20/M25/M40 AM2010_1764 PF07687 Peptidase dimerisation domain AM2010_1765 PF04958 Arginine N-succinyltransferase beta subunit AM2010_1766 PF04996 Succinylarginine dihydrolase AM2010_1768 PF01741 Large-conductance mechanosensitive channel, MscL AM2010_1772 PF00293 NUDIX domain AM2010_1776 PF02463 RecF/RecN/SMC N terminal domain AM2010_1777 PF13472 GDSL-like Lipase/Acylhydrolase family AM2010_1778 PF00005 ABC transporter AM2010_1780 PF07715 TonB-dependent Receptor Plug Domain AM2010_1780 PF00593 TonB dependent receptor AM2010_1781 PF05656 Protein of unknown function (DUF805) AM2010_1784 PF00474 Sodium:solute symporter family AM2010_1786 PF00072 Response regulator receiver domain AM2010_1786 PF00196 Bacterial regulatory proteins, luxR family AM2010_179 PF00313 'Cold-shock' DNA-binding domain AM2010_1790 PF14403 Circularly permuted ATP-grasp type 2 AM2010_1791 PF08241 Methyltransferase domain AM2010_1791 PF12697 Alpha/beta hydrolase family AM2010_1793 PF00271 Helicase conserved C-terminal domain AM2010_1793 PF17757 UvrB interaction domain AM2010_1793 PF12344 Ultra-violet resistance protein B AM2010_1793 PF02151 UvrB/uvrC motif AM2010_1793 PF04851 Type III restriction enzyme, res subunit AM2010_1795 PF01381 Helix-turn-helix AM2010_1798 PF00085 Thioredoxin AM2010_1798 PF11412 Disulphide bond corrector protein DsbC AM2010_1798 PF02683 Cytochrome C biogenesis protein transmembrane region AM2010_1799 PF01494 FAD binding domain AM2010_18 PF00034 Cytochrome c AM2010_1802 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM2010_1802 PF03900 Porphobilinogen deaminase, C-terminal domain AM2010_1803 PF00814 Glycoprotease family AM2010_1804 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM2010_1804 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM2010_1808 PF00829 Ribosomal prokaryotic L21 protein AM2010_1809 PF00196 Bacterial regulatory proteins, luxR family AM2010_1809 PF00072 Response regulator receiver domain AM2010_1810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1810 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_1810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_1811 PF13417 Glutathione S-transferase, N-terminal domain AM2010_1814 PF00593 TonB dependent receptor AM2010_1814 PF07715 TonB-dependent Receptor Plug Domain AM2010_1818 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_1818 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1818 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_1819 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_1819 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_1819 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1821 PF00501 AMP-binding enzyme AM2010_1821 PF13193 AMP-binding enzyme C-terminal domain AM2010_1823 PF00144 Beta-lactamase AM2010_1824 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM2010_1824 PF00378 Enoyl-CoA hydratase/isomerase AM2010_1824 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM2010_1825 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM2010_1825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM2010_1826 PF01042 Endoribonuclease L-PSP AM2010_1827 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM2010_1827 PF03466 LysR substrate binding domain AM2010_1830 PF03466 LysR substrate binding domain AM2010_1830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM2010_1833 PF07664 Ferrous iron transport protein B C terminus AM2010_1833 PF02421 Ferrous iron transport protein B AM2010_1833 PF07670 Nucleoside recognition AM2010_1836 PF12796 Ankyrin repeats (3 copies) AM2010_1837 PF02630 SCO1/SenC AM2010_1838 PF03692 Putative zinc- or iron-chelating domain AM2010_1841 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM2010_1841 PF01872 RibD C-terminal domain AM2010_1842 PF00677 Lumazine binding domain AM2010_1845 PF00155 Aminotransferase class I and II AM2010_1847 PF01925 Sulfite exporter TauE/SafE AM2010_1851 PF03576 Peptidase family S58 AM2010_1852 PF00593 TonB dependent receptor AM2010_1852 PF07715 TonB-dependent Receptor Plug Domain AM2010_1853 PF00854 POT family AM2010_1854 PF13382 Adenine deaminase C-terminal domain AM2010_1854 PF01979 Amidohydrolase family AM2010_1857 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM2010_1857 PF03466 LysR substrate binding domain AM2010_1858 PF00144 Beta-lactamase AM2010_1860 PF00202 Aminotransferase class-III AM2010_1861 PF00171 Aldehyde dehydrogenase family AM2010_1862 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM2010_1862 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM2010_1864 PF02515 CoA-transferase family III AM2010_1865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_1865 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_1865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1866 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM2010_1866 PF03466 LysR substrate binding domain AM2010_1868 PF01979 Amidohydrolase family AM2010_1877 PF03358 NADPH-dependent FMN reductase AM2010_1878 PF01758 Sodium Bile acid symporter family AM2010_1879 PF03960 ArsC family AM2010_1881 PF09423 PhoD-like phosphatase AM2010_1881 PF16655 PhoD-like phosphatase, N-terminal domain AM2010_1882 PF07715 TonB-dependent Receptor Plug Domain AM2010_1882 PF00593 TonB dependent receptor AM2010_1884 PF02525 Flavodoxin-like fold AM2010_1886 PF04314 Copper chaperone PCu(A)C AM2010_1887 PF02630 SCO1/SenC AM2010_1896 PF00460 Flagella basal body rod protein AM2010_1896 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM2010_1897 PF00460 Flagella basal body rod protein AM2010_1897 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM2010_1899 PF02107 Flagellar L-ring protein AM2010_19 PF01728 FtsJ-like methyltransferase AM2010_190 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM2010_190 PF14602 Hexapeptide repeat of succinyl-transferase AM2010_1900 PF02119 Flagellar P-ring protein AM2010_1902 PF00460 Flagella basal body rod protein AM2010_1903 PF02049 Flagellar hook-basal body complex protein FliE AM2010_1904 PF08345 Flagellar M-ring protein C-terminal AM2010_1904 PF01514 Secretory protein of YscJ/FliF family AM2010_1906 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM2010_1906 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM2010_1906 PF18269 T3SS EscN ATPase C-terminal domain AM2010_1910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM2010_1910 PF07559 Flagellar basal body protein FlaE AM2010_1912 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM2010_1914 PF00813 FliP family AM2010_1919 PF00771 FHIPEP family AM2010_192 PF08240 Alcohol dehydrogenase GroES-like domain AM2010_192 PF00107 Zinc-binding dehydrogenase AM2010_1920 PF01312 FlhB HrpN YscU SpaS Family AM2010_1921 PF01311 Bacterial export proteins, family 1 AM2010_1922 PF01313 Bacterial export proteins, family 3 AM2010_1923 PF01979 Amidohydrolase family AM2010_1924 PF02779 Transketolase, pyrimidine binding domain AM2010_1924 PF02780 Transketolase, C-terminal domain AM2010_1927 PF00743 Flavin-binding monooxygenase-like AM2010_1928 PF02464 Competence-damaged protein AM2010_1928 PF00994 Probable molybdopterin binding domain AM2010_1928 PF18146 Damage-inducible protein CinA KH domain AM2010_193 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_193 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_193 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1932 PF00687 Ribosomal protein L1p/L10e family AM2010_1933 PF00298 Ribosomal protein L11, RNA binding domain AM2010_1933 PF03946 Ribosomal protein L11, N-terminal domain AM2010_1934 PF02357 Transcription termination factor nusG AM2010_1934 PF00467 KOW motif AM2010_1935 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM2010_1936 PF01235 Sodium:alanine symporter family AM2010_1939 PF13823 Alcohol dehydrogenase GroES-associated AM2010_1939 PF08240 Alcohol dehydrogenase GroES-like domain AM2010_1939 PF00107 Zinc-binding dehydrogenase AM2010_1940 PF00106 short chain dehydrogenase AM2010_1943 PF00266 Aminotransferase class-V AM2010_1944 PF00593 TonB dependent receptor AM2010_1944 PF07715 TonB-dependent Receptor Plug Domain AM2010_1949 PF01145 SPFH domain / Band 7 family AM2010_1949 PF16200 C-terminal region of band_7 AM2010_195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_195 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_1951 PF00072 Response regulator receiver domain AM2010_1951 PF00486 Transcriptional regulatory protein, C terminal AM2010_1953 PF00171 Aldehyde dehydrogenase family AM2010_1954 PF04239 Protein of unknown function (DUF421) AM2010_1955 PF00551 Formyl transferase AM2010_1956 PF03060 Nitronate monooxygenase AM2010_1957 PF00141 Peroxidase AM2010_1958 PF10459 Peptidase S46 AM2010_1959 PF02222 ATP-grasp domain AM2010_196 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_196 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_196 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_1960 PF00990 Diguanylate cyclase, GGDEF domain AM2010_1962 PF13840 ACT domain AM2010_1962 PF00696 Amino acid kinase family AM2010_1962 PF01842 ACT domain AM2010_1964 PF03009 Glycerophosphoryl diester phosphodiesterase family AM2010_1965 PF03960 ArsC family AM2010_1968 PF02075 Crossover junction endodeoxyribonuclease RuvC AM2010_1969 PF01709 Transcriptional regulator AM2010_1970 PF00583 Acetyltransferase (GNAT) family AM2010_1971 PF01906 Putative heavy-metal-binding AM2010_1973 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) AM2010_1975 PF00224 Pyruvate kinase, barrel domain AM2010_1975 PF02887 Pyruvate kinase, alpha/beta domain AM2010_1977 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM2010_1979 PF05000 RNA polymerase Rpb1, domain 4 AM2010_1979 PF04998 RNA polymerase Rpb1, domain 5 AM2010_1979 PF04983 RNA polymerase Rpb1, domain 3 AM2010_1979 PF00623 RNA polymerase Rpb1, domain 2 AM2010_1979 PF04997 RNA polymerase Rpb1, domain 1 AM2010_198 PF00625 Guanylate kinase AM2010_1980 PF00562 RNA polymerase Rpb2, domain 6 AM2010_1980 PF04561 RNA polymerase Rpb2, domain 2 AM2010_1980 PF04560 RNA polymerase Rpb2, domain 7 AM2010_1980 PF04565 RNA polymerase Rpb2, domain 3 AM2010_1980 PF10385 RNA polymerase beta subunit external 1 domain AM2010_1980 PF04563 RNA polymerase beta subunit AM2010_1983 PF13443 Cro/C1-type HTH DNA-binding domain AM2010_1985 PF00466 Ribosomal protein L10 AM2010_1986 PF16320 Ribosomal protein L7/L12 dimerisation domain AM2010_1986 PF00542 Ribosomal protein L7/L12 C-terminal domain AM2010_1987 PF00034 Cytochrome c AM2010_1988 PF01554 MatE AM2010_1989 PF00166 Chaperonin 10 Kd subunit AM2010_1990 PF00118 TCP-1/cpn60 chaperonin family AM2010_1995 PF01612 3'-5' exonuclease AM2010_1995 PF00476 DNA polymerase family A AM2010_1995 PF01367 5'-3' exonuclease, C-terminal SAM fold AM2010_1995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM2010_1996 PF13581 Histidine kinase-like ATPase domain AM2010_1996 PF13426 PAS domain AM2010_1996 PF07536 HWE histidine kinase AM2010_1998 PF00004 ATPase family associated with various cellular activities (AAA) AM2010_1998 PF17862 AAA+ lid domain AM2010_1998 PF01434 Peptidase family M41 AM2010_1999 PF01144 Coenzyme A transferase AM2010_2 PF00899 ThiF family AM2010_2 PF00581 Rhodanese-like domain AM2010_20 PF02541 Ppx/GppA phosphatase family AM2010_2001 PF01144 Coenzyme A transferase AM2010_2002 PF02515 CoA-transferase family III AM2010_2003 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM2010_2003 PF02772 S-adenosylmethionine synthetase, central domain AM2010_2003 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM2010_2004 PF00795 Carbon-nitrogen hydrolase AM2010_2006 PF17827 PrmC N-terminal domain AM2010_2006 PF05175 Methyltransferase small domain AM2010_2007 PF03462 PCRF domain AM2010_2007 PF00472 RF-1 domain AM2010_2008 PF13393 Histidyl-tRNA synthetase AM2010_2009 PF00719 Inorganic pyrophosphatase AM2010_201 PF00475 Imidazoleglycerol-phosphate dehydratase AM2010_2010 PF00924 Mechanosensitive ion channel AM2010_2011 PF01523 Putative modulator of DNA gyrase AM2010_2013 PF00005 ABC transporter AM2010_2014 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM2010_2014 PF04963 Sigma-54 factor, core binding domain AM2010_2014 PF04552 Sigma-54, DNA binding domain AM2010_2015 PF00486 Transcriptional regulatory protein, C terminal AM2010_2015 PF00072 Response regulator receiver domain AM2010_2016 PF01925 Sulfite exporter TauE/SafE AM2010_2017 PF02390 Putative methyltransferase AM2010_2019 PF00593 TonB dependent receptor AM2010_2019 PF07715 TonB-dependent Receptor Plug Domain AM2010_202 PF00117 Glutamine amidotransferase class-I AM2010_2021 PF00390 Malic enzyme, N-terminal domain AM2010_2021 PF03949 Malic enzyme, NAD binding domain AM2010_2021 PF01515 Phosphate acetyl/butaryl transferase AM2010_2022 PF05188 MutS domain II AM2010_2022 PF05190 MutS family domain IV AM2010_2022 PF00488 MutS domain V AM2010_2022 PF05192 MutS domain III AM2010_2022 PF01624 MutS domain I AM2010_2026 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM2010_2026 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM2010_2027 PF01923 Cobalamin adenosyltransferase AM2010_2029 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM2010_203 PF00977 Histidine biosynthesis protein AM2010_2032 PF00266 Aminotransferase class-V AM2010_2033 PF03301 Tryptophan 2,3-dioxygenase AM2010_2035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM2010_2037 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM2010_204 PF00977 Histidine biosynthesis protein AM2010_2044 PF00072 Response regulator receiver domain AM2010_2046 PF00155 Aminotransferase class I and II AM2010_2048 PF02566 OsmC-like protein AM2010_2049 PF09335 SNARE associated Golgi protein AM2010_2052 PF04860 Phage portal protein AM2010_2068 PF00691 OmpA family AM2010_2069 PF00080 Copper/zinc superoxide dismutase (SODC) AM2010_207 PF09347 Domain of unknown function (DUF1989) AM2010_2071 PF06508 Queuosine biosynthesis protein QueC AM2010_2073 PF01430 Hsp33 protein AM2010_2074 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM2010_2074 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM2010_2075 PF00202 Aminotransferase class-III AM2010_2076 PF00313 'Cold-shock' DNA-binding domain AM2010_2078 PF03471 Transporter associated domain AM2010_2078 PF03741 Integral membrane protein TerC family AM2010_2080 PF01546 Peptidase family M20/M25/M40 AM2010_2082 PF04116 Fatty acid hydroxylase superfamily AM2010_2083 PF05199 GMC oxidoreductase AM2010_2083 PF00732 GMC oxidoreductase AM2010_2084 PF00909 Ammonium Transporter Family AM2010_2085 PF00543 Nitrogen regulatory protein P-II AM2010_2088 PF16658 Class II release factor RF3, C-terminal domain AM2010_2088 PF03144 Elongation factor Tu domain 2 AM2010_2088 PF00009 Elongation factor Tu GTP binding domain AM2010_2089 PF00106 short chain dehydrogenase AM2010_2090 PF03484 tRNA synthetase B5 domain AM2010_2090 PF03483 B3/4 domain AM2010_2090 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM2010_2090 PF03147 Ferredoxin-fold anticodon binding domain AM2010_2090 PF01588 Putative tRNA binding domain AM2010_2091 PF01409 tRNA synthetases class II core domain (F) AM2010_2091 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM2010_2093 PF00453 Ribosomal protein L20 AM2010_2094 PF01632 Ribosomal protein L35 AM2010_2096 PF00459 Inositol monophosphatase family AM2010_2097 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM2010_2097 PF14572 Phosphoribosyl synthetase-associated domain AM2010_2098 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM2010_210 PF07690 Major Facilitator Superfamily AM2010_2100 PF00742 Homoserine dehydrogenase AM2010_2100 PF03447 Homoserine dehydrogenase, NAD binding domain AM2010_2100 PF01842 ACT domain AM2010_2104 PF01618 MotA/TolQ/ExbB proton channel family AM2010_2105 PF02472 Biopolymer transport protein ExbD/TolR AM2010_2107 PF00271 Helicase conserved C-terminal domain AM2010_2107 PF08494 DEAD/H associated AM2010_2107 PF00270 DEAD/DEAH box helicase AM2010_2109 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM2010_2109 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM2010_2109 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM2010_2109 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM2010_211 PF10566 Glycoside hydrolase 97 AM2010_211 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AM2010_211 PF14508 Glycosyl-hydrolase 97 N-terminal AM2010_2111 PF13614 AAA domain AM2010_2112 PF02569 Pantoate-beta-alanine ligase AM2010_2115 PF05658 Head domain of trimeric autotransporter adhesin AM2010_2115 PF05662 Coiled stalk of trimeric autotransporter adhesin AM2010_2115 PF13018 Extended Signal Peptide of Type V secretion system AM2010_2115 PF03895 YadA-like membrane anchor domain AM2010_2117 PF01757 Acyltransferase family AM2010_2119 PF01507 Phosphoadenosine phosphosulfate reductase family AM2010_212 PF16347 Domain of unknown function (DUF4976) AM2010_212 PF00884 Sulfatase AM2010_2120 PF00009 Elongation factor Tu GTP binding domain AM2010_2121 PF00459 Inositol monophosphatase family AM2010_2122 PF00691 OmpA family AM2010_2122 PF00223 Photosystem I psaA/psaB protein AM2010_2124 PF00156 Phosphoribosyl transferase domain AM2010_2125 PF02167 Cytochrome C1 family AM2010_2126 PF00032 Cytochrome b(C-terminal)/b6/petD AM2010_2126 PF00033 Cytochrome b/b6/petB AM2010_2127 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AM2010_2127 PF00355 Rieske [2Fe-2S] domain AM2010_2129 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM2010_2129 PF01433 Peptidase family M1 domain AM2010_2129 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM2010_213 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM2010_213 PF14310 Fibronectin type III-like domain AM2010_213 PF00933 Glycosyl hydrolase family 3 N terminal domain AM2010_2132 PF01212 Beta-eliminating lyase AM2010_2134 PF03703 Bacterial PH domain AM2010_2138 PF00356 Bacterial regulatory proteins, lacI family AM2010_214 PF00593 TonB dependent receptor AM2010_2140 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM2010_2140 PF00933 Glycosyl hydrolase family 3 N terminal domain AM2010_2140 PF14310 Fibronectin type III-like domain AM2010_2142 PF07690 Major Facilitator Superfamily AM2010_2144 PF00300 Histidine phosphatase superfamily (branch 1) AM2010_2145 PF00731 AIR carboxylase AM2010_2146 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM2010_2146 PF02222 ATP-grasp domain AM2010_2147 PF00186 Dihydrofolate reductase AM2010_2148 PF01244 Membrane dipeptidase (Peptidase family M19) AM2010_2149 PF01687 Riboflavin kinase AM2010_2149 PF06574 FAD synthetase AM2010_2151 PF08264 Anticodon-binding domain of tRNA AM2010_2151 PF00133 tRNA synthetases class I (I, L, M and V) AM2010_2152 PF01252 Signal peptidase (SPase) II AM2010_2154 PF01595 Cyclin M transmembrane N-terminal domain AM2010_2154 PF03471 Transporter associated domain AM2010_2154 PF00571 CBS domain AM2010_2155 PF00691 OmpA family AM2010_2155 PF13488 Glycine zipper AM2010_2156 PF00459 Inositol monophosphatase family AM2010_2157 PF00549 CoA-ligase AM2010_2157 PF08442 ATP-grasp domain AM2010_2159 PF01012 Electron transfer flavoprotein domain AM2010_2160 PF01012 Electron transfer flavoprotein domain AM2010_2160 PF00766 Electron transfer flavoprotein FAD-binding domain AM2010_2162 PF04286 Protein of unknown function (DUF445) AM2010_2163 PF00873 AcrB/AcrD/AcrF family AM2010_217 PF00232 Glycosyl hydrolase family 1 AM2010_2171 PF02567 Phenazine biosynthesis-like protein AM2010_2172 PF16916 Dimerisation domain of Zinc Transporter AM2010_2172 PF01545 Cation efflux family AM2010_2173 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM2010_2173 PF01243 Pyridoxamine 5'-phosphate oxidase AM2010_2174 PF00226 DnaJ domain AM2010_2174 PF01556 DnaJ C terminal domain AM2010_2174 PF00684 DnaJ central domain AM2010_2175 PF03631 Virulence factor BrkB AM2010_2178 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM2010_2179 PF17836 PglD N-terminal domain AM2010_2179 PF00132 Bacterial transferase hexapeptide (six repeats) AM2010_2179 PF14602 Hexapeptide repeat of succinyl-transferase AM2010_2180 PF02397 Bacterial sugar transferase AM2010_2183 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM2010_2183 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM2010_2187 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM2010_2187 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM2010_2187 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM2010_2188 PF02350 UDP-N-acetylglucosamine 2-epimerase AM2010_2189 PF02719 Polysaccharide biosynthesis protein AM2010_219 PF00528 Binding-protein-dependent transport system inner membrane component AM2010_2193 PF13807 G-rich domain on putative tyrosine kinase AM2010_2193 PF02706 Chain length determinant protein AM2010_2193 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM2010_2195 PF16363 GDP-mannose 4,6 dehydratase AM2010_2197 PF03232 Ubiquinone biosynthesis protein COQ7 AM2010_2199 PF13180 PDZ domain AM2010_2199 PF03572 Peptidase family S41 AM2010_220 PF00528 Binding-protein-dependent transport system inner membrane component AM2010_2201 PF02590 Predicted SPOUT methyltransferase AM2010_2203 PF01467 Cytidylyltransferase-like AM2010_2204 PF01476 LysM domain AM2010_2204 PF01551 Peptidase family M23 AM2010_2204 PF08525 Opacity-associated protein A N-terminal motif AM2010_2206 PF13193 AMP-binding enzyme C-terminal domain AM2010_2206 PF00501 AMP-binding enzyme AM2010_2208 PF00534 Glycosyl transferases group 1 AM2010_2208 PF13439 Glycosyltransferase Family 4 AM2010_221 PF01547 Bacterial extracellular solute-binding protein AM2010_2210 PF08240 Alcohol dehydrogenase GroES-like domain AM2010_2210 PF00698 Acyl transferase domain AM2010_2210 PF14765 Polyketide synthase dehydratase AM2010_2210 PF08659 KR domain AM2010_2210 PF00550 Phosphopantetheine attachment site AM2010_2210 PF00107 Zinc-binding dehydrogenase AM2010_2210 PF16197 Ketoacyl-synthetase C-terminal extension AM2010_2210 PF02801 Beta-ketoacyl synthase, C-terminal domain AM2010_2210 PF00109 Beta-ketoacyl synthase, N-terminal domain AM2010_2212 PF07724 AAA domain (Cdc48 subfamily) AM2010_2212 PF02861 Clp amino terminal domain, pathogenicity island component AM2010_2212 PF17871 AAA lid domain AM2010_2212 PF10431 C-terminal, D2-small domain, of ClpB protein AM2010_2212 PF00004 ATPase family associated with various cellular activities (AAA) AM2010_2213 PF04675 DNA ligase N terminus AM2010_2213 PF01068 ATP dependent DNA ligase domain AM2010_2213 PF04679 ATP dependent DNA ligase C terminal region AM2010_2215 PF06912 Protein of unknown function (DUF1275) AM2010_2219 PF00958 GMP synthase C terminal domain AM2010_2219 PF03352 Methyladenine glycosylase AM2010_2219 PF13302 Acetyltransferase (GNAT) domain AM2010_2219 PF13673 Acetyltransferase (GNAT) domain AM2010_2219 PF00117 Glutamine amidotransferase class-I AM2010_222 PF00356 Bacterial regulatory proteins, lacI family AM2010_2220 PF00490 Delta-aminolevulinic acid dehydratase AM2010_2221 PF04225 Opacity-associated protein A LysM-like domain AM2010_2221 PF01551 Peptidase family M23 AM2010_2223 PF01479 S4 domain AM2010_2224 PF00037 4Fe-4S binding domain AM2010_2224 PF11953 Domain of unknown function (DUF3470) AM2010_2225 PF02559 CarD-like/TRCF domain AM2010_2228 PF03481 Putative GTP-binding controlling metal-binding AM2010_2228 PF01300 Telomere recombination AM2010_2229 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_2229 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_2229 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM2010_2229 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_223 PF00005 ABC transporter AM2010_223 PF17912 MalK OB fold domain AM2010_2231 PF07995 Glucose / Sorbosone dehydrogenase AM2010_2232 PF13185 GAF domain AM2010_2234 PF02195 ParB-like nuclease domain AM2010_2234 PF17762 HTH domain found in ParB protein AM2010_2235 PF13614 AAA domain AM2010_2236 PF02527 rRNA small subunit methyltransferase G AM2010_2237 PF01134 Glucose inhibited division protein A AM2010_2237 PF13932 GidA associated domain AM2010_2238 PF10396 GTP-binding protein TrmE N-terminus AM2010_2238 PF01926 50S ribosome-binding GTPase AM2010_2238 PF12631 MnmE helical domain AM2010_224 PF00672 HAMP domain AM2010_224 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM2010_2240 PF01738 Dienelactone hydrolase family AM2010_2241 PF01645 Conserved region in glutamate synthase AM2010_2244 PF07498 Rho termination factor, N-terminal domain AM2010_2244 PF07497 Rho termination factor, RNA-binding domain AM2010_2244 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM2010_2246 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM2010_2247 PF03618 Kinase/pyrophosphorylase AM2010_2248 PF02545 Maf-like protein AM2010_2249 PF08501 Shikimate dehydrogenase substrate binding domain AM2010_2249 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM2010_225 PF00563 EAL domain AM2010_225 PF00990 Diguanylate cyclase, GGDEF domain AM2010_225 PF08447 PAS fold AM2010_225 PF08448 PAS fold AM2010_2250 PF01121 Dephospho-CoA kinase AM2010_2251 PF00929 Exonuclease AM2010_2252 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM2010_2252 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AM2010_2258 PF01521 Iron-sulphur cluster biosynthesis AM2010_226 PF03705 CheR methyltransferase, all-alpha domain AM2010_226 PF01739 CheR methyltransferase, SAM binding domain AM2010_2261 PF00501 AMP-binding enzyme AM2010_2263 PF01180 Dihydroorotate dehydrogenase AM2010_2265 PF02082 Transcriptional regulator AM2010_2266 PF01458 Uncharacterized protein family (UPF0051) AM2010_2268 PF00005 ABC transporter AM2010_227 PF01339 CheB methylesterase AM2010_227 PF00072 Response regulator receiver domain AM2010_2270 PF01458 Uncharacterized protein family (UPF0051) AM2010_2271 PF00266 Aminotransferase class-V AM2010_2272 PF01883 Iron-sulfur cluster assembly protein AM2010_2273 PF01521 Iron-sulphur cluster biosynthesis AM2010_2277 PF00294 pfkB family carbohydrate kinase AM2010_2278 PF02844 Phosphoribosylglycinamide synthetase, N domain AM2010_2278 PF02843 Phosphoribosylglycinamide synthetase, C domain AM2010_2278 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM2010_2279 PF02601 Exonuclease VII, large subunit AM2010_2279 PF13742 OB-fold nucleic acid binding domain AM2010_2281 PF01476 LysM domain AM2010_2281 PF01551 Peptidase family M23 AM2010_2283 PF00830 Ribosomal L28 family AM2010_2284 PF14437 MafB19-like deaminase AM2010_2286 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM2010_2286 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM2010_2287 PF00072 Response regulator receiver domain AM2010_2287 PF04397 LytTr DNA-binding domain AM2010_2288 PF07694 5TMR of 5TMR-LYT AM2010_2288 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_2288 PF06580 Histidine kinase AM2010_2292 PF01435 Peptidase family M48 AM2010_2294 PF00067 Cytochrome P450 AM2010_2295 PF01641 SelR domain AM2010_2297 PF00216 Bacterial DNA-binding protein AM2010_2298 PF00392 Bacterial regulatory proteins, gntR family AM2010_2298 PF07702 UTRA domain AM2010_2299 PF00854 POT family AM2010_230 PF07194 P2 response regulator binding domain AM2010_230 PF01627 Hpt domain AM2010_230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_230 PF02895 Signal transducing histidine kinase, homodimeric domain AM2010_230 PF01584 CheW-like domain AM2010_2300 PF01979 Amidohydrolase family AM2010_2302 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM2010_2302 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM2010_2305 PF02779 Transketolase, pyrimidine binding domain AM2010_2305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM2010_2305 PF02780 Transketolase, C-terminal domain AM2010_2307 PF01625 Peptide methionine sulfoxide reductase AM2010_2309 PF02142 MGS-like domain AM2010_2309 PF01808 AICARFT/IMPCHase bienzyme AM2010_2311 PF00834 Ribulose-phosphate 3 epimerase family AM2010_2316 PF07715 TonB-dependent Receptor Plug Domain AM2010_2316 PF00593 TonB dependent receptor AM2010_2317 PF03435 Saccharopine dehydrogenase NADP binding domain AM2010_2318 PF00692 dUTPase AM2010_232 PF00111 2Fe-2S iron-sulfur cluster binding domain AM2010_232 PF01799 [2Fe-2S] binding domain AM2010_2320 PF14850 DNA-binding domain of Proline dehydrogenase AM2010_2320 PF00171 Aldehyde dehydrogenase family AM2010_2320 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM2010_2320 PF01619 Proline dehydrogenase AM2010_2321 PF01266 FAD dependent oxidoreductase AM2010_2321 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM2010_2322 PF01575 MaoC like domain AM2010_2324 PF01434 Peptidase family M41 AM2010_2324 PF17862 AAA+ lid domain AM2010_2324 PF00004 ATPase family associated with various cellular activities (AAA) AM2010_2326 PF03167 Uracil DNA glycosylase superfamily AM2010_233 PF00593 TonB dependent receptor AM2010_233 PF07715 TonB-dependent Receptor Plug Domain AM2010_2332 PF00133 tRNA synthetases class I (I, L, M and V) AM2010_2332 PF08264 Anticodon-binding domain of tRNA AM2010_2332 PF13603 Leucyl-tRNA synthetase, Domain 2 AM2010_2339 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM2010_234 PF03960 ArsC family AM2010_2340 PF00483 Nucleotidyl transferase AM2010_2343 PF00501 AMP-binding enzyme AM2010_2343 PF13193 AMP-binding enzyme C-terminal domain AM2010_2344 PF01551 Peptidase family M23 AM2010_2344 PF08525 Opacity-associated protein A N-terminal motif AM2010_2344 PF01476 LysM domain AM2010_2345 PF04305 Protein of unknown function (DUF455) AM2010_2346 PF00578 AhpC/TSA family AM2010_2347 PF03710 Glutamate-ammonia ligase adenylyltransferase AM2010_2347 PF08335 GlnD PII-uridylyltransferase AM2010_2349 PF04371 Porphyromonas-type peptidyl-arginine deiminase AM2010_2352 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM2010_2352 PF03129 Anticodon binding domain AM2010_2352 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM2010_2352 PF02824 TGS domain AM2010_2356 PF00296 Luciferase-like monooxygenase AM2010_2357 PF05088 Bacterial NAD-glutamate dehydrogenase AM2010_2358 PF14759 Reductase C-terminal AM2010_2358 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM2010_2359 PF08331 Domain of unknown function (DUF1730) AM2010_2360 PF13732 Domain of unknown function (DUF4162) AM2010_2360 PF00005 ABC transporter AM2010_2364 PF05690 Thiazole biosynthesis protein ThiG AM2010_2366 PF02628 Cytochrome oxidase assembly protein AM2010_2367 PF03091 CutA1 divalent ion tolerance protein AM2010_2369 PF00572 Ribosomal protein L13 AM2010_2370 PF00380 Ribosomal protein S9/S16 AM2010_2372 PF02333 Phytase AM2010_2373 PF02254 TrkA-N domain AM2010_2373 PF00999 Sodium/hydrogen exchanger family AM2010_2378 PF00072 Response regulator receiver domain AM2010_2378 PF04397 LytTr DNA-binding domain AM2010_2379 PF06580 Histidine kinase AM2010_2379 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_2379 PF00672 HAMP domain AM2010_2379 PF02743 Cache domain AM2010_238 PF03099 Biotin/lipoate A/B protein ligase family AM2010_2382 PF02321 Outer membrane efflux protein AM2010_2384 PF07676 WD40-like Beta Propeller Repeat AM2010_2384 PF00326 Prolyl oligopeptidase family AM2010_2384 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AM2010_2390 PF00561 alpha/beta hydrolase fold AM2010_2390 PF00364 Biotin-requiring enzyme AM2010_24 PF08275 DNA primase catalytic core, N-terminal domain AM2010_24 PF01807 CHC2 zinc finger AM2010_240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM2010_2403 PF12161 HsdM N-terminal domain AM2010_2403 PF02384 N-6 DNA Methylase AM2010_2406 PF18766 SWI2/SNF2 ATPase AM2010_2406 PF11867 Domain of unknown function (DUF3387) AM2010_2406 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AM2010_2409 PF07715 TonB-dependent Receptor Plug Domain AM2010_2409 PF00593 TonB dependent receptor AM2010_2410 PF00326 Prolyl oligopeptidase family AM2010_2410 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AM2010_2413 PF01758 Sodium Bile acid symporter family AM2010_2414 PF01266 FAD dependent oxidoreductase AM2010_2419 PF04199 Putative cyclase AM2010_242 PF10011 Predicted membrane protein (DUF2254) AM2010_2421 PF01979 Amidohydrolase family AM2010_2422 PF01047 MarR family AM2010_2423 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_2423 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_2423 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_2424 PF01042 Endoribonuclease L-PSP AM2010_2426 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_2426 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_2426 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_2427 PF00378 Enoyl-CoA hydratase/isomerase AM2010_2429 PF00106 short chain dehydrogenase AM2010_2430 PF01494 FAD binding domain AM2010_2431 PF00155 Aminotransferase class I and II AM2010_2433 PF08240 Alcohol dehydrogenase GroES-like domain AM2010_2433 PF00107 Zinc-binding dehydrogenase AM2010_2437 PF00085 Thioredoxin AM2010_2438 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM2010_2438 PF00004 ATPase family associated with various cellular activities (AAA) AM2010_2438 PF05362 Lon protease (S16) C-terminal proteolytic domain AM2010_2439 PF01914 MarC family integral membrane protein AM2010_244 PF02028 BCCT, betaine/carnitine/choline family transporter AM2010_2441 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM2010_2441 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM2010_2442 PF02325 YGGT family AM2010_2443 PF00696 Amino acid kinase family AM2010_2446 PF02803 Thiolase, C-terminal domain AM2010_2446 PF00108 Thiolase, N-terminal domain AM2010_2450 PF00570 HRDC domain AM2010_2450 PF00270 DEAD/DEAH box helicase AM2010_2450 PF09382 RQC domain AM2010_2450 PF00271 Helicase conserved C-terminal domain AM2010_2450 PF16124 RecQ zinc-binding AM2010_2455 PF00925 GTP cyclohydrolase II AM2010_2458 PF00471 Ribosomal protein L33 AM2010_2459 PF00472 RF-1 domain AM2010_2460 PF00849 RNA pseudouridylate synthase AM2010_2461 PF04715 Anthranilate synthase component I, N terminal region AM2010_2461 PF00425 chorismate binding enzyme AM2010_2462 PF05872 Bacterial protein of unknown function (DUF853) AM2010_2463 PF00512 His Kinase A (phospho-acceptor) domain AM2010_2463 PF00672 HAMP domain AM2010_2463 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_2464 PF00486 Transcriptional regulatory protein, C terminal AM2010_2464 PF00072 Response regulator receiver domain AM2010_2469 PF00326 Prolyl oligopeptidase family AM2010_2469 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM2010_247 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM2010_247 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM2010_2471 PF00990 Diguanylate cyclase, GGDEF domain AM2010_2471 PF17158 Membrane-associated sensor, integral membrane domain AM2010_2472 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM2010_2472 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM2010_2473 PF07396 Phosphate-selective porin O and P AM2010_2474 PF12849 PBP superfamily domain AM2010_2475 PF02735 Ku70/Ku80 beta-barrel domain AM2010_2476 PF02308 MgtC family AM2010_2477 PF01068 ATP dependent DNA ligase domain AM2010_2477 PF13298 DNA polymerase Ligase (LigD) AM2010_2477 PF04679 ATP dependent DNA ligase C terminal region AM2010_2480 PF17854 FtsK alpha domain AM2010_2480 PF01580 FtsK/SpoIIIE family AM2010_2480 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM2010_2480 PF09397 Ftsk gamma domain AM2010_2482 PF01168 Alanine racemase, N-terminal domain AM2010_2484 PF08335 GlnD PII-uridylyltransferase AM2010_2484 PF03445 Putative nucleotidyltransferase DUF294 AM2010_2484 PF01966 HD domain AM2010_2485 PF00501 AMP-binding enzyme AM2010_2485 PF13193 AMP-binding enzyme C-terminal domain AM2010_2486 PF01790 Prolipoprotein diacylglyceryl transferase AM2010_2488 PF00528 Binding-protein-dependent transport system inner membrane component AM2010_2489 PF00005 ABC transporter AM2010_2490 PF00990 Diguanylate cyclase, GGDEF domain AM2010_2490 PF08447 PAS fold AM2010_2490 PF08448 PAS fold AM2010_2490 PF00563 EAL domain AM2010_2491 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_2491 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_2491 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_2492 PF16363 GDP-mannose 4,6 dehydratase AM2010_2493 PF01039 Carboxyl transferase domain AM2010_2496 PF00149 Calcineurin-like phosphoesterase AM2010_2498 PF00204 DNA gyrase B AM2010_2498 PF00986 DNA gyrase B subunit, carboxyl terminus AM2010_2498 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_2498 PF01751 Toprim domain AM2010_2499 PF03313 Serine dehydratase alpha chain AM2010_2499 PF03315 Serine dehydratase beta chain AM2010_2501 PF00501 AMP-binding enzyme AM2010_2501 PF13193 AMP-binding enzyme C-terminal domain AM2010_2503 PF00117 Glutamine amidotransferase class-I AM2010_2503 PF02540 NAD synthase AM2010_2503 PF00958 GMP synthase C terminal domain AM2010_2505 PF00797 N-acetyltransferase AM2010_2506 PF03060 Nitronate monooxygenase AM2010_251 PF02896 PEP-utilising enzyme, TIM barrel domain AM2010_251 PF00391 PEP-utilising enzyme, mobile domain AM2010_251 PF05524 PEP-utilising enzyme, N-terminal AM2010_2510 PF01523 Putative modulator of DNA gyrase AM2010_2511 PF00005 ABC transporter AM2010_2512 PF02910 Fumarate reductase flavoprotein C-term AM2010_2512 PF00890 FAD binding domain AM2010_2513 PF00561 alpha/beta hydrolase fold AM2010_2514 PF02867 Ribonucleotide reductase, barrel domain AM2010_2514 PF00317 Ribonucleotide reductase, all-alpha domain AM2010_2514 PF03477 ATP cone domain AM2010_2524 PF00155 Aminotransferase class I and II AM2010_2526 PF00202 Aminotransferase class-III AM2010_2528 PF00356 Bacterial regulatory proteins, lacI family AM2010_2531 PF00294 pfkB family carbohydrate kinase AM2010_2532 PF00135 Carboxylesterase family AM2010_2537 PF04616 Glycosyl hydrolases family 43 AM2010_2537 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AM2010_2538 PF03480 Bacterial extracellular solute-binding protein, family 7 AM2010_254 PF01171 PP-loop family AM2010_2540 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM2010_2541 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM2010_2541 PF08666 SAF domain AM2010_2542 PF02614 Glucuronate isomerase AM2010_2543 PF01232 Mannitol dehydrogenase Rossmann domain AM2010_2543 PF08125 Mannitol dehydrogenase C-terminal domain AM2010_2545 PF01613 Flavin reductase like domain AM2010_2546 PF01209 ubiE/COQ5 methyltransferase family AM2010_2547 PF02219 Methylenetetrahydrofolate reductase AM2010_2548 PF02574 Homocysteine S-methyltransferase AM2010_2548 PF00809 Pterin binding enzyme AM2010_2550 PF02607 B12 binding domain AM2010_2550 PF02574 Homocysteine S-methyltransferase AM2010_2550 PF02310 B12 binding domain AM2010_2550 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM2010_2550 PF00809 Pterin binding enzyme AM2010_2551 PF01571 Aminomethyltransferase folate-binding domain AM2010_2551 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM2010_2552 PF01597 Glycine cleavage H-protein AM2010_2553 PF02347 Glycine cleavage system P-protein AM2010_2554 PF00266 Aminotransferase class-V AM2010_2558 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM2010_2558 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM2010_2559 PF00378 Enoyl-CoA hydratase/isomerase AM2010_256 PF01081 KDPG and KHG aldolase AM2010_2560 PF00378 Enoyl-CoA hydratase/isomerase AM2010_2564 PF00171 Aldehyde dehydrogenase family AM2010_2565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM2010_2565 PF03466 LysR substrate binding domain AM2010_2568 PF00072 Response regulator receiver domain AM2010_2568 PF00158 Sigma-54 interaction domain AM2010_2568 PF02954 Bacterial regulatory protein, Fis family AM2010_2569 PF02743 Cache domain AM2010_2569 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_2569 PF00512 His Kinase A (phospho-acceptor) domain AM2010_257 PF00920 Dehydratase family AM2010_2570 PF00375 Sodium:dicarboxylate symporter family AM2010_2571 PF13472 GDSL-like Lipase/Acylhydrolase family AM2010_2571 PF07859 alpha/beta hydrolase fold AM2010_2572 PF00593 TonB dependent receptor AM2010_2572 PF07715 TonB-dependent Receptor Plug Domain AM2010_2574 PF03060 Nitronate monooxygenase AM2010_2575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM2010_2575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM2010_2577 PF03055 Retinal pigment epithelial membrane protein AM2010_2579 PF01638 HxlR-like helix-turn-helix AM2010_258 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM2010_258 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM2010_2580 PF07715 TonB-dependent Receptor Plug Domain AM2010_2580 PF00593 TonB dependent receptor AM2010_2581 PF00106 short chain dehydrogenase AM2010_2583 PF13193 AMP-binding enzyme C-terminal domain AM2010_2583 PF00501 AMP-binding enzyme AM2010_2585 PF00501 AMP-binding enzyme AM2010_2585 PF13193 AMP-binding enzyme C-terminal domain AM2010_2586 PF00108 Thiolase, N-terminal domain AM2010_2586 PF02803 Thiolase, C-terminal domain AM2010_2587 PF02803 Thiolase, C-terminal domain AM2010_2587 PF00108 Thiolase, N-terminal domain AM2010_2588 PF00756 Putative esterase AM2010_259 PF00356 Bacterial regulatory proteins, lacI family AM2010_2590 PF00561 alpha/beta hydrolase fold AM2010_2590 PF07021 Methionine biosynthesis protein MetW AM2010_2591 PF00561 alpha/beta hydrolase fold AM2010_2592 PF00155 Aminotransferase class I and II AM2010_2593 PF02153 Prephenate dehydrogenase AM2010_2597 PF00005 ABC transporter AM2010_2598 PF13717 zinc-ribbon domain AM2010_2605 PF00107 Zinc-binding dehydrogenase AM2010_2605 PF08240 Alcohol dehydrogenase GroES-like domain AM2010_2606 PF00171 Aldehyde dehydrogenase family AM2010_261 PF02685 Glucokinase AM2010_2610 PF01641 SelR domain AM2010_2611 PF00912 Transglycosylase AM2010_2611 PF00905 Penicillin binding protein transpeptidase domain AM2010_2612 PF13180 PDZ domain AM2010_2613 PF01145 SPFH domain / Band 7 family AM2010_2614 PF01145 SPFH domain / Band 7 family AM2010_2615 PF10609 NUBPL iron-transfer P-loop NTPase AM2010_2616 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM2010_2617 PF00762 Ferrochelatase AM2010_2618 PF00067 Cytochrome P450 AM2010_2620 PF01029 NusB family AM2010_2620 PF01189 16S rRNA methyltransferase RsmB/F AM2010_2622 PF01209 ubiE/COQ5 methyltransferase family AM2010_2623 PF01625 Peptide methionine sulfoxide reductase AM2010_2625 PF02540 NAD synthase AM2010_2625 PF00795 Carbon-nitrogen hydrolase AM2010_2628 PF07859 alpha/beta hydrolase fold AM2010_2630 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AM2010_2633 PF02673 Bacitracin resistance protein BacA AM2010_2634 PF05649 Peptidase family M13 AM2010_2634 PF01431 Peptidase family M13 AM2010_2635 PF00664 ABC transporter transmembrane region AM2010_2635 PF00005 ABC transporter AM2010_2638 PF02803 Thiolase, C-terminal domain AM2010_2638 PF00108 Thiolase, N-terminal domain AM2010_264 PF00593 TonB dependent receptor AM2010_264 PF07715 TonB-dependent Receptor Plug Domain AM2010_2642 PF13439 Glycosyltransferase Family 4 AM2010_2642 PF00534 Glycosyl transferases group 1 AM2010_2645 PF04898 Glutamate synthase central domain AM2010_2645 PF01493 GXGXG motif AM2010_2645 PF01645 Conserved region in glutamate synthase AM2010_2645 PF00310 Glutamine amidotransferases class-II AM2010_2646 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM2010_2646 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM2010_2647 PF01192 RNA polymerase Rpb6 AM2010_2649 PF03796 DnaB-like helicase C terminal domain AM2010_2649 PF00772 DnaB-like helicase N terminal domain AM2010_2650 PF06793 Uncharacterised protein family (UPF0262) AM2010_2652 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM2010_2653 PF18027 Cytosolic carboxypeptidase N-terminal domain AM2010_2653 PF00246 Zinc carboxypeptidase AM2010_2655 PF01370 NAD dependent epimerase/dehydratase family AM2010_2656 PF00444 Ribosomal protein L36 AM2010_2659 PF01638 HxlR-like helix-turn-helix AM2010_2660 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM2010_2660 PF01078 Magnesium chelatase, subunit ChlI AM2010_2662 PF00468 Ribosomal protein L34 AM2010_2663 PF00825 Ribonuclease P AM2010_2664 PF01809 Putative membrane protein insertion efficiency factor AM2010_2665 PF02096 60Kd inner membrane protein AM2010_2665 PF14849 YidC periplasmic domain AM2010_2666 PF01926 50S ribosome-binding GTPase AM2010_2667 PF00583 Acetyltransferase (GNAT) family AM2010_2669 PF01112 Asparaginase AM2010_267 PF04055 Radical SAM superfamily AM2010_267 PF00919 Uncharacterized protein family UPF0004 AM2010_267 PF18693 TRAM domain AM2010_2670 PF05552 Conserved TM helix AM2010_2672 PF04551 GcpE protein AM2010_2674 PF01471 Putative peptidoglycan binding domain AM2010_2674 PF03734 L,D-transpeptidase catalytic domain AM2010_2676 PF00330 Aconitase family (aconitate hydratase) AM2010_2676 PF00694 Aconitase C-terminal domain AM2010_2679 PF17864 RuvB AAA lid domain AM2010_2679 PF05491 RuvB C-terminal winged helix domain AM2010_2679 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM2010_2681 PF01330 RuvA N terminal domain AM2010_2681 PF07499 RuvA, C-terminal domain AM2010_2682 PF01264 Chorismate synthase AM2010_2683 PF01794 Ferric reductase like transmembrane component AM2010_2685 PF00578 AhpC/TSA family AM2010_2685 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM2010_2686 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM2010_2686 PF13192 Thioredoxin domain AM2010_2688 PF06725 3D domain AM2010_2688 PF03562 MltA specific insert domain AM2010_2689 PF04280 Tim44-like domain AM2010_2690 PF02556 Preprotein translocase subunit SecB AM2010_2691 PF03023 Lipid II flippase MurJ AM2010_2692 PF00579 tRNA synthetases class I (W and Y) AM2010_2694 PF00692 dUTPase AM2010_2695 PF04127 DNA / pantothenate metabolism flavoprotein AM2010_2695 PF02441 Flavoprotein AM2010_2698 PF03109 ABC1 family AM2010_2699 PF01209 ubiE/COQ5 methyltransferase family AM2010_2700 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM2010_2700 PF06827 Zinc finger found in FPG and IleRS AM2010_2700 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM2010_2701 PF01649 Ribosomal protein S20 AM2010_272 PF01975 Survival protein SurE AM2010_273 PF02403 Seryl-tRNA synthetase N-terminal domain AM2010_273 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM2010_275 PF00593 TonB dependent receptor AM2010_275 PF07715 TonB-dependent Receptor Plug Domain AM2010_276 PF17934 Tetracyclin repressor-like, C-terminal domain AM2010_276 PF00440 Bacterial regulatory proteins, tetR family AM2010_277 PF00005 ABC transporter AM2010_277 PF12848 ABC transporter AM2010_281 PF01618 MotA/TolQ/ExbB proton channel family AM2010_282 PF02472 Biopolymer transport protein ExbD/TolR AM2010_286 PF05860 haemagglutination activity domain AM2010_288 PF00440 Bacterial regulatory proteins, tetR family AM2010_29 PF08000 Bacterial PH domain AM2010_290 PF05662 Coiled stalk of trimeric autotransporter adhesin AM2010_290 PF05658 Head domain of trimeric autotransporter adhesin AM2010_290 PF03895 YadA-like membrane anchor domain AM2010_290 PF05658 Head domain of trimeric autotransporter adhesin AM2010_290 PF05662 Coiled stalk of trimeric autotransporter adhesin AM2010_290 PF13018 Extended Signal Peptide of Type V secretion system AM2010_290 PF03895 YadA-like membrane anchor domain AM2010_290 PF13018 Extended Signal Peptide of Type V secretion system AM2010_294 PF05726 Pirin C-terminal cupin domain AM2010_294 PF02678 Pirin AM2010_295 PF05726 Pirin C-terminal cupin domain AM2010_295 PF02678 Pirin AM2010_298 PF18011 C-terminal domain found in long catalases AM2010_298 PF06628 Catalase-related immune-responsive AM2010_298 PF00199 Catalase AM2010_300 PF00753 Metallo-beta-lactamase superfamily AM2010_300 PF04273 Putative phosphatase (DUF442) AM2010_302 PF04143 Sulphur transport AM2010_303 PF00753 Metallo-beta-lactamase superfamily AM2010_304 PF01022 Bacterial regulatory protein, arsR family AM2010_305 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM2010_305 PF00753 Metallo-beta-lactamase superfamily AM2010_311 PF01343 Peptidase family S49 AM2010_312 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM2010_312 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM2010_313 PF01979 Amidohydrolase family AM2010_316 PF13614 AAA domain AM2010_318 PF04235 Protein of unknown function (DUF418) AM2010_320 PF00210 Ferritin-like domain AM2010_322 PF01926 50S ribosome-binding GTPase AM2010_322 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM2010_326 PF05697 Bacterial trigger factor protein (TF) AM2010_326 PF05698 Bacterial trigger factor protein (TF) C-terminus AM2010_326 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM2010_328 PF00574 Clp protease AM2010_329 PF06689 ClpX C4-type zinc finger AM2010_329 PF10431 C-terminal, D2-small domain, of ClpB protein AM2010_329 PF07724 AAA domain (Cdc48 subfamily) AM2010_332 PF16916 Dimerisation domain of Zinc Transporter AM2010_332 PF01545 Cation efflux family AM2010_333 PF00912 Transglycosylase AM2010_334 PF04545 Sigma-70, region 4 AM2010_334 PF04542 Sigma-70 region 2 AM2010_334 PF00140 Sigma-70 factor, region 1.2 AM2010_335 PF00849 RNA pseudouridylate synthase AM2010_337 PF10090 Histidine phosphotransferase C-terminal domain AM2010_338 PF01510 N-acetylmuramoyl-L-alanine amidase AM2010_339 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM2010_339 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM2010_339 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM2010_340 PF00149 Calcineurin-like phosphoesterase AM2010_344 PF06965 Na+/H+ antiporter 1 AM2010_345 PF13632 Glycosyl transferase family group 2 AM2010_345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM2010_347 PF01925 Sulfite exporter TauE/SafE AM2010_351 PF08264 Anticodon-binding domain of tRNA AM2010_351 PF10458 Valyl tRNA synthetase tRNA binding arm AM2010_351 PF00133 tRNA synthetases class I (I, L, M and V) AM2010_352 PF02405 Permease MlaE AM2010_353 PF00005 ABC transporter AM2010_358 PF13419 Haloacid dehalogenase-like hydrolase AM2010_359 PF01479 S4 domain AM2010_359 PF00849 RNA pseudouridylate synthase AM2010_360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM2010_361 PF01165 Ribosomal protein S21 AM2010_362 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM2010_362 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM2010_363 PF02686 Glu-tRNAGln amidotransferase C subunit AM2010_364 PF01425 Amidase AM2010_366 PF02934 GatB/GatE catalytic domain AM2010_366 PF02637 GatB domain AM2010_369 PF00675 Insulinase (Peptidase family M16) AM2010_369 PF05193 Peptidase M16 inactive domain AM2010_371 PF00004 ATPase family associated with various cellular activities (AAA) AM2010_371 PF07724 AAA domain (Cdc48 subfamily) AM2010_371 PF17871 AAA lid domain AM2010_371 PF02861 Clp amino terminal domain, pathogenicity island component AM2010_371 PF10431 C-terminal, D2-small domain, of ClpB protein AM2010_372 PF00593 TonB dependent receptor AM2010_372 PF07715 TonB-dependent Receptor Plug Domain AM2010_375 PF00593 TonB dependent receptor AM2010_375 PF07715 TonB-dependent Receptor Plug Domain AM2010_376 PF02803 Thiolase, C-terminal domain AM2010_376 PF00108 Thiolase, N-terminal domain AM2010_377 PF00106 short chain dehydrogenase AM2010_378 PF00378 Enoyl-CoA hydratase/isomerase AM2010_384 PF04972 BON domain AM2010_384 PF00263 Bacterial type II and III secretion system protein AM2010_384 PF13629 Pilus formation protein N terminal region AM2010_389 PF07411 Domain of unknown function (DUF1508) AM2010_390 PF00075 RNase H AM2010_391 PF01636 Phosphotransferase enzyme family AM2010_392 PF02401 LytB protein AM2010_394 PF00750 tRNA synthetases class I (R) AM2010_394 PF00133 tRNA synthetases class I (I, L, M and V) AM2010_394 PF05746 DALR anticodon binding domain AM2010_394 PF03485 Arginyl tRNA synthetase N terminal domain AM2010_396 PF00933 Glycosyl hydrolase family 3 N terminal domain AM2010_397 PF02616 Segregation and condensation protein ScpA AM2010_398 PF04079 Segregation and condensation complex subunit ScpB AM2010_399 PF02416 mttA/Hcf106 family AM2010_4 PF02146 Sir2 family AM2010_400 PF02416 mttA/Hcf106 family AM2010_401 PF00902 Sec-independent protein translocase protein (TatC) AM2010_404 PF00291 Pyridoxal-phosphate dependent enzyme AM2010_404 PF13291 ACT domain AM2010_405 PF04376 Arginine-tRNA-protein transferase, N terminus AM2010_405 PF04377 Arginine-tRNA-protein transferase, C terminus AM2010_409 PF03951 Glutamine synthetase, beta-Grasp domain AM2010_409 PF00120 Glutamine synthetase, catalytic domain AM2010_410 PF00543 Nitrogen regulatory protein P-II AM2010_411 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM2010_413 PF02789 Cytosol aminopeptidase family, N-terminal domain AM2010_413 PF00883 Cytosol aminopeptidase family, catalytic domain AM2010_415 PF00557 Metallopeptidase family M24 AM2010_417 PF00106 short chain dehydrogenase AM2010_419 PF03379 CcmB protein AM2010_420 PF00005 ABC transporter AM2010_421 PF01329 Pterin 4 alpha carbinolamine dehydratase AM2010_422 PF00106 short chain dehydrogenase AM2010_423 PF00326 Prolyl oligopeptidase family AM2010_425 PF00111 2Fe-2S iron-sulfur cluster binding domain AM2010_426 PF00291 Pyridoxal-phosphate dependent enzyme AM2010_429 PF02381 MraZ protein, putative antitoxin-like AM2010_430 PF01795 MraW methylase family AM2010_432 PF00905 Penicillin binding protein transpeptidase domain AM2010_432 PF03717 Penicillin-binding Protein dimerisation domain AM2010_433 PF08245 Mur ligase middle domain AM2010_433 PF02875 Mur ligase family, glutamate ligase domain AM2010_433 PF01225 Mur ligase family, catalytic domain AM2010_434 PF02875 Mur ligase family, glutamate ligase domain AM2010_434 PF08245 Mur ligase middle domain AM2010_434 PF01225 Mur ligase family, catalytic domain AM2010_435 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM2010_435 PF00953 Glycosyl transferase family 4 AM2010_436 PF02875 Mur ligase family, glutamate ligase domain AM2010_436 PF08245 Mur ligase middle domain AM2010_437 PF01098 Cell cycle protein AM2010_438 PF04101 Glycosyltransferase family 28 C-terminal domain AM2010_438 PF03033 Glycosyltransferase family 28 N-terminal domain AM2010_439 PF08245 Mur ligase middle domain AM2010_439 PF02875 Mur ligase family, glutamate ligase domain AM2010_439 PF01225 Mur ligase family, catalytic domain AM2010_440 PF01565 FAD binding domain AM2010_440 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM2010_441 PF01820 D-ala D-ala ligase N-terminus AM2010_441 PF07478 D-ala D-ala ligase C-terminus AM2010_442 PF08478 POTRA domain, FtsQ-type AM2010_442 PF03799 Cell division protein FtsQ AM2010_443 PF02491 SHS2 domain inserted in FTSA AM2010_444 PF00091 Tubulin/FtsZ family, GTPase domain AM2010_444 PF12327 FtsZ family, C-terminal domain AM2010_447 PF01027 Inhibitor of apoptosis-promoting Bax1 AM2010_449 PF01018 GTP1/OBG AM2010_449 PF01926 50S ribosome-binding GTPase AM2010_45 PF01047 MarR family AM2010_450 PF01472 PUA domain AM2010_450 PF00696 Amino acid kinase family AM2010_451 PF01370 NAD dependent epimerase/dehydratase family AM2010_452 PF01507 Phosphoadenosine phosphosulfate reductase family AM2010_456 PF10414 Sirohaem synthase dimerisation region AM2010_456 PF14824 Sirohaem biosynthesis protein central AM2010_456 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM2010_457 PF00924 Mechanosensitive ion channel AM2010_457 PF12795 Mechanosensitive ion channel porin domain AM2010_457 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM2010_458 PF01053 Cys/Met metabolism PLP-dependent enzyme AM2010_459 PF00581 Rhodanese-like domain AM2010_460 PF00557 Metallopeptidase family M24 AM2010_462 PF12867 DinB superfamily AM2010_462 PF03781 Sulfatase-modifying factor enzyme 1 AM2010_463 PF10017 Histidine-specific methyltransferase, SAM-dependent AM2010_467 PF01266 FAD dependent oxidoreductase AM2010_468 PF01042 Endoribonuclease L-PSP AM2010_471 PF00375 Sodium:dicarboxylate symporter family AM2010_472 PF00593 TonB dependent receptor AM2010_472 PF07715 TonB-dependent Receptor Plug Domain AM2010_473 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM2010_473 PF03466 LysR substrate binding domain AM2010_474 PF02798 Glutathione S-transferase, N-terminal domain AM2010_476 PF02464 Competence-damaged protein AM2010_476 PF18146 Damage-inducible protein CinA KH domain AM2010_476 PF00994 Probable molybdopterin binding domain AM2010_477 PF00795 Carbon-nitrogen hydrolase AM2010_477 PF02540 NAD synthase AM2010_479 PF01063 Amino-transferase class IV AM2010_481 PF01728 FtsJ-like methyltransferase AM2010_481 PF01479 S4 domain AM2010_482 PF03073 TspO/MBR family AM2010_484 PF11967 Recombination protein O N terminal AM2010_484 PF02565 Recombination protein O C terminal AM2010_485 PF00180 Isocitrate/isopropylmalate dehydrogenase AM2010_489 PF01053 Cys/Met metabolism PLP-dependent enzyme AM2010_490 PF04379 ApaG domain AM2010_491 PF02541 Ppx/GppA phosphatase family AM2010_492 PF13090 Polyphosphate kinase C-terminal domain 2 AM2010_492 PF13089 Polyphosphate kinase N-terminal domain AM2010_492 PF17941 Polyphosphate kinase C-terminal domain 1 AM2010_492 PF02503 Polyphosphate kinase middle domain AM2010_493 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM2010_493 PF03466 LysR substrate binding domain AM2010_496 PF00164 Ribosomal protein S12/S23 AM2010_497 PF00177 Ribosomal protein S7p/S5e AM2010_498 PF03144 Elongation factor Tu domain 2 AM2010_498 PF00009 Elongation factor Tu GTP binding domain AM2010_498 PF03764 Elongation factor G, domain IV AM2010_498 PF14492 Elongation Factor G, domain II AM2010_498 PF00679 Elongation factor G C-terminus AM2010_499 PF03144 Elongation factor Tu domain 2 AM2010_499 PF03143 Elongation factor Tu C-terminal domain AM2010_499 PF00009 Elongation factor Tu GTP binding domain AM2010_5 PF05173 Dihydrodipicolinate reductase, C-terminus AM2010_5 PF01113 Dihydrodipicolinate reductase, N-terminus AM2010_50 PF07715 TonB-dependent Receptor Plug Domain AM2010_50 PF00593 TonB dependent receptor AM2010_500 PF00338 Ribosomal protein S10p/S20e AM2010_501 PF00297 Ribosomal protein L3 AM2010_502 PF00573 Ribosomal protein L4/L1 family AM2010_503 PF00276 Ribosomal protein L23 AM2010_504 PF00181 Ribosomal Proteins L2, RNA binding domain AM2010_504 PF03947 Ribosomal Proteins L2, C-terminal domain AM2010_505 PF00203 Ribosomal protein S19 AM2010_506 PF00237 Ribosomal protein L22p/L17e AM2010_507 PF07650 KH domain AM2010_507 PF00189 Ribosomal protein S3, C-terminal domain AM2010_508 PF00252 Ribosomal protein L16p/L10e AM2010_509 PF00831 Ribosomal L29 protein AM2010_510 PF00366 Ribosomal protein S17 AM2010_511 PF00238 Ribosomal protein L14p/L23e AM2010_512 PF00467 KOW motif AM2010_512 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM2010_513 PF00281 Ribosomal protein L5 AM2010_513 PF00673 ribosomal L5P family C-terminus AM2010_514 PF00253 Ribosomal protein S14p/S29e AM2010_515 PF00410 Ribosomal protein S8 AM2010_516 PF00347 Ribosomal protein L6 AM2010_517 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM2010_518 PF03719 Ribosomal protein S5, C-terminal domain AM2010_518 PF00333 Ribosomal protein S5, N-terminal domain AM2010_519 PF00327 Ribosomal protein L30p/L7e AM2010_52 PF07715 TonB-dependent Receptor Plug Domain AM2010_52 PF00593 TonB dependent receptor AM2010_520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM2010_521 PF00344 SecY translocase AM2010_522 PF05191 Adenylate kinase, active site lid AM2010_524 PF00416 Ribosomal protein S13/S18 AM2010_525 PF00411 Ribosomal protein S11 AM2010_526 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM2010_526 PF01000 RNA polymerase Rpb3/RpoA insert domain AM2010_526 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM2010_527 PF01196 Ribosomal protein L17 AM2010_529 PF00326 Prolyl oligopeptidase family AM2010_529 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM2010_532 PF03458 UPF0126 domain AM2010_533 PF01425 Amidase AM2010_534 PF00144 Beta-lactamase AM2010_535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM2010_535 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM2010_537 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM2010_537 PF00364 Biotin-requiring enzyme AM2010_537 PF02817 e3 binding domain AM2010_538 PF00676 Dehydrogenase E1 component AM2010_538 PF16870 2-oxoglutarate dehydrogenase C-terminal AM2010_538 PF02779 Transketolase, pyrimidine binding domain AM2010_538 PF16078 2-oxoglutarate dehydrogenase N-terminus AM2010_540 PF02629 CoA binding domain AM2010_540 PF00549 CoA-ligase AM2010_541 PF00056 lactate/malate dehydrogenase, NAD binding domain AM2010_541 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM2010_542 PF03707 Bacterial signalling protein N terminal repeat AM2010_542 PF13188 PAS domain AM2010_542 PF00990 Diguanylate cyclase, GGDEF domain AM2010_542 PF00563 EAL domain AM2010_545 PF07715 TonB-dependent Receptor Plug Domain AM2010_545 PF00593 TonB dependent receptor AM2010_546 PF01432 Peptidase family M3 AM2010_548 PF00144 Beta-lactamase AM2010_549 PF17760 UvrA interaction domain AM2010_549 PF17755 UvrA DNA-binding domain AM2010_55 PF06906 Protein of unknown function (DUF1272) AM2010_554 PF03330 Lytic transglycolase AM2010_555 PF00764 Arginosuccinate synthase AM2010_558 PF00174 Oxidoreductase molybdopterin binding domain AM2010_559 PF01292 Prokaryotic cytochrome b561 AM2010_56 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM2010_56 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM2010_56 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM2010_56 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM2010_562 PF02525 Flavodoxin-like fold AM2010_563 PF01638 HxlR-like helix-turn-helix AM2010_564 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM2010_565 PF01070 FMN-dependent dehydrogenase AM2010_566 PF03965 Penicillinase repressor AM2010_569 PF04228 Putative neutral zinc metallopeptidase AM2010_572 PF00478 IMP dehydrogenase / GMP reductase domain AM2010_572 PF00571 CBS domain AM2010_574 PF01029 NusB family AM2010_574 PF01189 16S rRNA methyltransferase RsmB/F AM2010_576 PF00293 NUDIX domain AM2010_577 PF07859 alpha/beta hydrolase fold AM2010_578 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM2010_578 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AM2010_578 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AM2010_579 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM2010_58 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM2010_58 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM2010_581 PF01569 PAP2 superfamily AM2010_582 PF03441 FAD binding domain of DNA photolyase AM2010_582 PF00875 DNA photolyase AM2010_585 PF00144 Beta-lactamase AM2010_587 PF00106 short chain dehydrogenase AM2010_588 PF13537 Glutamine amidotransferase domain AM2010_588 PF00156 Phosphoribosyl transferase domain AM2010_589 PF12704 MacB-like periplasmic core domain AM2010_589 PF02687 FtsX-like permease family AM2010_590 PF00005 ABC transporter AM2010_592 PF00255 Glutathione peroxidase AM2010_593 PF14579 Helix-hairpin-helix motif AM2010_593 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM2010_593 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM2010_593 PF02811 PHP domain AM2010_595 PF00501 AMP-binding enzyme AM2010_595 PF13193 AMP-binding enzyme C-terminal domain AM2010_599 PF00171 Aldehyde dehydrogenase family AM2010_6 PF00633 Helix-hairpin-helix motif AM2010_6 PF00730 HhH-GPD superfamily base excision DNA repair protein AM2010_6 PF10576 Iron-sulfur binding domain of endonuclease III AM2010_60 PF08281 Sigma-70, region 4 AM2010_60 PF04542 Sigma-70 region 2 AM2010_600 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM2010_606 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM2010_608 PF01040 UbiA prenyltransferase family AM2010_610 PF09278 MerR, DNA binding AM2010_610 PF00376 MerR family regulatory protein AM2010_612 PF08406 CbbQ/NirQ/NorQ C-terminal AM2010_612 PF07728 AAA domain (dynein-related subfamily) AM2010_612 PF12556 Cobaltochelatase CobS subunit N terminal AM2010_613 PF00905 Penicillin binding protein transpeptidase domain AM2010_613 PF00912 Transglycosylase AM2010_614 PF10397 Adenylosuccinate lyase C-terminus AM2010_614 PF00206 Lyase AM2010_616 PF01022 Bacterial regulatory protein, arsR family AM2010_62 PF13426 PAS domain AM2010_62 PF13581 Histidine kinase-like ATPase domain AM2010_62 PF07536 HWE histidine kinase AM2010_621 PF00924 Mechanosensitive ion channel AM2010_622 PF04002 RadC-like JAB domain AM2010_627 PF00119 ATP synthase A chain AM2010_628 PF00137 ATP synthase subunit C AM2010_629 PF00430 ATP synthase B/B' CF(0) AM2010_63 PF00072 Response regulator receiver domain AM2010_630 PF00430 ATP synthase B/B' CF(0) AM2010_631 PF03358 NADPH-dependent FMN reductase AM2010_631 PF01566 Natural resistance-associated macrophage protein AM2010_632 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM2010_632 PF00753 Metallo-beta-lactamase superfamily AM2010_633 PF00575 S1 RNA binding domain AM2010_634 PF02224 Cytidylate kinase AM2010_636 PF00893 Small Multidrug Resistance protein AM2010_637 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM2010_639 PF02978 Signal peptide binding domain AM2010_639 PF02881 SRP54-type protein, helical bundle domain AM2010_639 PF00448 SRP54-type protein, GTPase domain AM2010_64 PF00072 Response regulator receiver domain AM2010_64 PF00486 Transcriptional regulatory protein, C terminal AM2010_640 PF00886 Ribosomal protein S16 AM2010_641 PF01782 RimM N-terminal domain AM2010_641 PF05239 PRC-barrel domain AM2010_643 PF01245 Ribosomal protein L19 AM2010_644 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM2010_644 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM2010_647 PF00561 alpha/beta hydrolase fold AM2010_649 PF18030 RimK PreATP-grasp domain AM2010_649 PF08443 RimK-like ATP-grasp domain AM2010_650 PF08443 RimK-like ATP-grasp domain AM2010_650 PF18030 RimK PreATP-grasp domain AM2010_652 PF01048 Phosphorylase superfamily AM2010_652 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM2010_653 PF03948 Ribosomal protein L9, C-terminal domain AM2010_653 PF01281 Ribosomal protein L9, N-terminal domain AM2010_654 PF01084 Ribosomal protein S18 AM2010_655 PF01250 Ribosomal protein S6 AM2010_656 PF05661 Protein of unknown function (DUF808) AM2010_657 PF02875 Mur ligase family, glutamate ligase domain AM2010_657 PF01225 Mur ligase family, catalytic domain AM2010_657 PF08245 Mur ligase middle domain AM2010_659 PF00117 Glutamine amidotransferase class-I AM2010_659 PF06418 CTP synthase N-terminus AM2010_660 PF00011 Hsp20/alpha crystallin family AM2010_661 PF00462 Glutaredoxin AM2010_662 PF00795 Carbon-nitrogen hydrolase AM2010_665 PF00929 Exonuclease AM2010_665 PF13307 Helicase C-terminal domain AM2010_665 PF04851 Type III restriction enzyme, res subunit AM2010_667 PF01921 tRNA synthetases class I (K) AM2010_671 PF12848 ABC transporter AM2010_671 PF00005 ABC transporter AM2010_675 PF07969 Amidohydrolase family AM2010_676 PF00593 TonB dependent receptor AM2010_676 PF07715 TonB-dependent Receptor Plug Domain AM2010_678 PF00512 His Kinase A (phospho-acceptor) domain AM2010_678 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_679 PF01037 Lrp/AsnC ligand binding domain AM2010_681 PF00289 Biotin carboxylase, N-terminal domain AM2010_681 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM2010_681 PF02785 Biotin carboxylase C-terminal domain AM2010_682 PF00364 Biotin-requiring enzyme AM2010_683 PF01220 Dehydroquinase class II AM2010_684 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AM2010_685 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM2010_687 PF03328 HpcH/HpaI aldolase/citrate lyase family AM2010_688 PF01979 Amidohydrolase family AM2010_688 PF13382 Adenine deaminase C-terminal domain AM2010_690 PF02699 Preprotein translocase subunit AM2010_691 PF02355 Protein export membrane protein AM2010_691 PF07549 SecD/SecF GG Motif AM2010_692 PF07549 SecD/SecF GG Motif AM2010_692 PF02355 Protein export membrane protein AM2010_693 PF00534 Glycosyl transferases group 1 AM2010_693 PF13439 Glycosyltransferase Family 4 AM2010_7 PF01546 Peptidase family M20/M25/M40 AM2010_7 PF07687 Peptidase dimerisation domain AM2010_70 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM2010_700 PF07969 Amidohydrolase family AM2010_703 PF00486 Transcriptional regulatory protein, C terminal AM2010_703 PF00072 Response regulator receiver domain AM2010_704 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_704 PF08918 PhoQ Sensor AM2010_705 PF00348 Polyprenyl synthetase AM2010_706 PF08482 ATP-dependent helicase C-terminal AM2010_706 PF04408 Helicase associated domain (HA2) AM2010_706 PF00270 DEAD/DEAH box helicase AM2010_706 PF00271 Helicase conserved C-terminal domain AM2010_708 PF12170 DNA polymerase III tau subunit V interacting with alpha AM2010_708 PF12169 DNA polymerase III subunits gamma and tau domain III AM2010_708 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM2010_709 PF02575 YbaB/EbfC DNA-binding family AM2010_710 PF00596 Class II Aldolase and Adducin N-terminal domain AM2010_711 PF00004 ATPase family associated with various cellular activities (AAA) AM2010_711 PF05362 Lon protease (S16) C-terminal proteolytic domain AM2010_711 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM2010_712 PF00216 Bacterial DNA-binding protein AM2010_714 PF00588 SpoU rRNA Methylase family AM2010_714 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM2010_717 PF07690 Major Facilitator Superfamily AM2010_718 PF00196 Bacterial regulatory proteins, luxR family AM2010_72 PF00561 alpha/beta hydrolase fold AM2010_72 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AM2010_725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM2010_725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM2010_727 PF02666 Phosphatidylserine decarboxylase AM2010_728 PF01066 CDP-alcohol phosphatidyltransferase AM2010_73 PF00155 Aminotransferase class I and II AM2010_730 PF00318 Ribosomal protein S2 AM2010_731 PF00889 Elongation factor TS AM2010_732 PF00696 Amino acid kinase family AM2010_733 PF01765 Ribosome recycling factor AM2010_734 PF01255 Putative undecaprenyl diphosphate synthase AM2010_736 PF13288 DXP reductoisomerase C-terminal domain AM2010_736 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM2010_736 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM2010_737 PF17820 PDZ domain AM2010_737 PF02163 Peptidase family M50 AM2010_738 PF07244 Surface antigen variable number repeat AM2010_738 PF01103 Surface antigen AM2010_74 PF00072 Response regulator receiver domain AM2010_74 PF00486 Transcriptional regulatory protein, C terminal AM2010_740 PF07977 FabA-like domain AM2010_741 PF01197 Ribosomal protein L31 AM2010_742 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM2010_742 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM2010_743 PF01578 Cytochrome C assembly protein AM2010_745 PF03100 CcmE AM2010_746 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM2010_746 PF01578 Cytochrome C assembly protein AM2010_747 PF08534 Redoxin AM2010_748 PF03918 Cytochrome C biogenesis protein AM2010_75 PF00378 Enoyl-CoA hydratase/isomerase AM2010_750 PF02705 K+ potassium transporter AM2010_751 PF04279 Intracellular septation protein A AM2010_752 PF00448 SRP54-type protein, GTPase domain AM2010_752 PF02881 SRP54-type protein, helical bundle domain AM2010_753 PF04055 Radical SAM superfamily AM2010_753 PF00919 Uncharacterized protein family UPF0004 AM2010_754 PF01678 Diaminopimelate epimerase AM2010_755 PF03707 Bacterial signalling protein N terminal repeat AM2010_755 PF13188 PAS domain AM2010_755 PF00990 Diguanylate cyclase, GGDEF domain AM2010_755 PF00563 EAL domain AM2010_760 PF01066 CDP-alcohol phosphatidyltransferase AM2010_761 PF13614 AAA domain AM2010_762 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM2010_762 PF03466 LysR substrate binding domain AM2010_763 PF01612 3'-5' exonuclease AM2010_763 PF00570 HRDC domain AM2010_764 PF00152 tRNA synthetases class II (D, K and N) AM2010_764 PF01336 OB-fold nucleic acid binding domain AM2010_764 PF02938 GAD domain AM2010_765 PF13689 YfiR/HmsC-like AM2010_766 PF00990 Diguanylate cyclase, GGDEF domain AM2010_766 PF17152 Periplasmic sensor domain AM2010_768 PF00550 Phosphopantetheine attachment site AM2010_769 PF02801 Beta-ketoacyl synthase, C-terminal domain AM2010_769 PF00109 Beta-ketoacyl synthase, N-terminal domain AM2010_77 PF07715 TonB-dependent Receptor Plug Domain AM2010_77 PF00593 TonB dependent receptor AM2010_770 PF02618 YceG-like family AM2010_773 PF00270 DEAD/DEAH box helicase AM2010_773 PF00271 Helicase conserved C-terminal domain AM2010_773 PF03880 DbpA RNA binding domain AM2010_774 PF02358 Trehalose-phosphatase AM2010_775 PF00723 Glycosyl hydrolases family 15 AM2010_776 PF00982 Glycosyltransferase family 20 AM2010_777 PF13350 Tyrosine phosphatase family AM2010_778 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM2010_781 PF01209 ubiE/COQ5 methyltransferase family AM2010_783 PF00291 Pyridoxal-phosphate dependent enzyme AM2010_784 PF16653 Saccharopine dehydrogenase C-terminal domain AM2010_784 PF03435 Saccharopine dehydrogenase NADP binding domain AM2010_785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM2010_787 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM2010_787 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM2010_788 PF00486 Transcriptional regulatory protein, C terminal AM2010_788 PF00072 Response regulator receiver domain AM2010_789 PF01895 PhoU domain AM2010_790 PF00005 ABC transporter AM2010_791 PF00528 Binding-protein-dependent transport system inner membrane component AM2010_792 PF00528 Binding-protein-dependent transport system inner membrane component AM2010_793 PF16736 Single Cache-like AM2010_793 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_793 PF00512 His Kinase A (phospho-acceptor) domain AM2010_793 PF00989 PAS fold AM2010_794 PF17768 RecJ OB domain AM2010_794 PF02272 DHHA1 domain AM2010_794 PF01368 DHH family AM2010_799 PF04909 Amidohydrolase AM2010_80 PF00005 ABC transporter AM2010_800 PF00682 HMGL-like AM2010_800 PF08502 LeuA allosteric (dimerisation) domain AM2010_801 PF04264 YceI-like domain AM2010_802 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM2010_802 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM2010_803 PF10369 Small subunit of acetolactate synthase AM2010_804 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM2010_804 PF00205 Thiamine pyrophosphate enzyme, central domain AM2010_804 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM2010_809 PF02769 AIR synthase related protein, C-terminal domain AM2010_809 PF00586 AIR synthase related protein, N-terminal domain AM2010_809 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM2010_81 PF01032 FecCD transport family AM2010_812 PF00348 Polyprenyl synthetase AM2010_813 PF01467 Cytidylyltransferase-like AM2010_814 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM2010_815 PF02547 Queuosine biosynthesis protein AM2010_816 PF09587 Bacterial capsule synthesis protein PGA_cap AM2010_817 PF00440 Bacterial regulatory proteins, tetR family AM2010_818 PF03055 Retinal pigment epithelial membrane protein AM2010_819 PF00005 ABC transporter AM2010_820 PF01061 ABC-2 type transporter AM2010_822 PF01702 Queuine tRNA-ribosyltransferase AM2010_823 PF00163 Ribosomal protein S4/S9 N-terminal domain AM2010_823 PF01479 S4 domain AM2010_825 PF00588 SpoU rRNA Methylase family AM2010_826 PF03477 ATP cone domain AM2010_827 PF00464 Serine hydroxymethyltransferase AM2010_828 PF02502 Ribose/Galactose Isomerase AM2010_829 PF00140 Sigma-70 factor, region 1.2 AM2010_829 PF04542 Sigma-70 region 2 AM2010_829 PF04546 Sigma-70, non-essential region AM2010_829 PF03979 Sigma-70 factor, region 1.1 AM2010_829 PF04539 Sigma-70 region 3 AM2010_829 PF04545 Sigma-70, region 4 AM2010_83 PF04545 Sigma-70, region 4 AM2010_83 PF04539 Sigma-70 region 3 AM2010_83 PF04542 Sigma-70 region 2 AM2010_830 PF08278 DNA primase DnaG DnaB-binding AM2010_830 PF01807 CHC2 zinc finger AM2010_830 PF10410 DnaB-helicase binding domain of primase AM2010_830 PF08275 DNA primase catalytic core, N-terminal domain AM2010_832 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM2010_832 PF00117 Glutamine amidotransferase class-I AM2010_834 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM2010_834 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM2010_834 PF02142 MGS-like domain AM2010_835 PF01272 Transcription elongation factor, GreA/GreB, C-term AM2010_835 PF03449 Transcription elongation factor, N-terminal AM2010_84 PF00771 FHIPEP family AM2010_841 PF00113 Enolase, C-terminal TIM barrel domain AM2010_841 PF03952 Enolase, N-terminal domain AM2010_843 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM2010_844 PF01098 Cell cycle protein AM2010_845 PF00905 Penicillin binding protein transpeptidase domain AM2010_845 PF03717 Penicillin-binding Protein dimerisation domain AM2010_847 PF04085 rod shape-determining protein MreC AM2010_849 PF01119 DNA mismatch repair protein, C-terminal domain AM2010_849 PF08676 MutL C terminal dimerisation domain AM2010_851 PF07977 FabA-like domain AM2010_854 PF00376 MerR family regulatory protein AM2010_854 PF09278 MerR, DNA binding AM2010_857 PF01926 50S ribosome-binding GTPase AM2010_857 PF06071 Protein of unknown function (DUF933) AM2010_858 PF01195 Peptidyl-tRNA hydrolase AM2010_859 PF13193 AMP-binding enzyme C-terminal domain AM2010_859 PF00501 AMP-binding enzyme AM2010_859 PF16177 Acetyl-coenzyme A synthetase N-terminus AM2010_860 PF14693 Ribosomal protein TL5, C-terminal domain AM2010_860 PF01386 Ribosomal L25p family AM2010_863 PF02091 Glycyl-tRNA synthetase alpha subunit AM2010_864 PF02092 Glycyl-tRNA synthetase beta subunit AM2010_864 PF05746 DALR anticodon binding domain AM2010_865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM2010_865 PF02896 PEP-utilising enzyme, TIM barrel domain AM2010_865 PF00391 PEP-utilising enzyme, mobile domain AM2010_867 PF00156 Phosphoribosyl transferase domain AM2010_868 PF01502 Phosphoribosyl-AMP cyclohydrolase AM2010_869 PF13411 MerR HTH family regulatory protein AM2010_870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM2010_870 PF02770 Acyl-CoA dehydrogenase, middle domain AM2010_870 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM2010_870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM2010_871 PF00230 Major intrinsic protein AM2010_873 PF01266 FAD dependent oxidoreductase AM2010_874 PF00291 Pyridoxal-phosphate dependent enzyme AM2010_877 PF00579 tRNA synthetases class I (W and Y) AM2010_877 PF01479 S4 domain AM2010_879 PF07075 Protein of unknown function (DUF1343) AM2010_880 PF07690 Major Facilitator Superfamily AM2010_881 PF05675 Protein of unknown function (DUF817) AM2010_883 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM2010_883 PF12729 Four helix bundle sensory module for signal transduction AM2010_883 PF00672 HAMP domain AM2010_885 PF01434 Peptidase family M41 AM2010_885 PF17862 AAA+ lid domain AM2010_885 PF00004 ATPase family associated with various cellular activities (AAA) AM2010_885 PF06480 FtsH Extracellular AM2010_890 PF00986 DNA gyrase B subunit, carboxyl terminus AM2010_890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_890 PF01751 Toprim domain AM2010_890 PF00204 DNA gyrase B AM2010_891 PF04348 LppC putative lipoprotein AM2010_892 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM2010_893 PF02021 Uncharacterised protein family UPF0102 AM2010_894 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM2010_894 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM2010_895 PF09335 SNARE associated Golgi protein AM2010_896 PF02899 Phage integrase, N-terminal SAM-like domain AM2010_896 PF00589 Phage integrase family AM2010_897 PF04055 Radical SAM superfamily AM2010_897 PF06969 HemN C-terminal domain AM2010_898 PF01725 Ham1 family AM2010_899 PF01138 3' exoribonuclease family, domain 1 AM2010_899 PF03725 3' exoribonuclease family, domain 2 AM2010_90 PF01618 MotA/TolQ/ExbB proton channel family AM2010_900 PF01628 HrcA protein C terminal domain AM2010_901 PF01025 GrpE AM2010_907 PF00012 Hsp70 protein AM2010_908 PF00684 DnaJ central domain AM2010_908 PF00226 DnaJ domain AM2010_908 PF01556 DnaJ C terminal domain AM2010_909 PF11856 Protein of unknown function (DUF3376) AM2010_909 PF01734 Patatin-like phospholipase AM2010_910 PF18073 Rubredoxin metal binding domain AM2010_910 PF06745 KaiC AM2010_913 PF08946 Osmosensory transporter coiled coil AM2010_913 PF00083 Sugar (and other) transporter AM2010_914 PF00842 Alanine racemase, C-terminal domain AM2010_914 PF01168 Alanine racemase, N-terminal domain AM2010_915 PF07879 PHB/PHA accumulation regulator DNA-binding domain AM2010_915 PF05233 PHB accumulation regulatory domain AM2010_916 PF03129 Anticodon binding domain AM2010_916 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM2010_917 PF04389 Peptidase family M28 AM2010_917 PF02225 PA domain AM2010_918 PF17876 Cold shock domain AM2010_918 PF00773 RNB domain AM2010_918 PF00575 S1 RNA binding domain AM2010_918 PF08461 Ribonuclease R winged-helix domain AM2010_918 PF08206 Ribonuclease B OB domain AM2010_922 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM2010_922 PF00364 Biotin-requiring enzyme AM2010_922 PF02817 e3 binding domain AM2010_925 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM2010_925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM2010_926 PF02254 TrkA-N domain AM2010_926 PF00999 Sodium/hydrogen exchanger family AM2010_929 PF04773 FecR protein AM2010_929 PF16220 Domain of unknown function (DUF4880) AM2010_930 PF00593 TonB dependent receptor AM2010_930 PF07715 TonB-dependent Receptor Plug Domain AM2010_931 PF05193 Peptidase M16 inactive domain AM2010_931 PF00675 Insulinase (Peptidase family M16) AM2010_932 PF12833 Helix-turn-helix domain AM2010_933 PF00082 Subtilase family AM2010_933 PF03797 Autotransporter beta-domain AM2010_933 PF12951 Passenger-associated-transport-repeat AM2010_937 PF00593 TonB dependent receptor AM2010_937 PF07715 TonB-dependent Receptor Plug Domain AM2010_938 PF00111 2Fe-2S iron-sulfur cluster binding domain AM2010_938 PF00175 Oxidoreductase NAD-binding domain AM2010_939 PF02311 AraC-like ligand binding domain AM2010_939 PF12833 Helix-turn-helix domain AM2010_94 PF00460 Flagella basal body rod protein AM2010_94 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM2010_940 PF00775 Dioxygenase AM2010_940 PF04444 Catechol dioxygenase N terminus AM2010_942 PF00465 Iron-containing alcohol dehydrogenase AM2010_943 PF02803 Thiolase, C-terminal domain AM2010_943 PF00108 Thiolase, N-terminal domain AM2010_945 PF01144 Coenzyme A transferase AM2010_946 PF01144 Coenzyme A transferase AM2010_948 PF12706 Beta-lactamase superfamily domain AM2010_949 PF13406 Transglycosylase SLT domain AM2010_95 PF00460 Flagella basal body rod protein AM2010_95 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM2010_950 PF03330 Lytic transglycolase AM2010_950 PF05036 Sporulation related domain AM2010_952 PF02223 Thymidylate kinase AM2010_953 PF09115 DNA polymerase III, delta subunit, C terminal AM2010_954 PF08264 Anticodon-binding domain of tRNA AM2010_954 PF09334 tRNA synthetases class I (M) AM2010_955 PF01026 TatD related DNase AM2010_956 PF03099 Biotin/lipoate A/B protein ligase family AM2010_956 PF12706 Beta-lactamase superfamily domain AM2010_958 PF03819 MazG nucleotide pyrophosphohydrolase domain AM2010_959 PF13167 GTP-binding GTPase N-terminal AM2010_959 PF16360 GTP-binding GTPase Middle Region AM2010_959 PF01926 50S ribosome-binding GTPase AM2010_96 PF00460 Flagella basal body rod protein AM2010_96 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM2010_960 PF17209 Hfq protein AM2010_961 PF00158 Sigma-54 interaction domain AM2010_961 PF00072 Response regulator receiver domain AM2010_961 PF02954 Bacterial regulatory protein, Fis family AM2010_962 PF00672 HAMP domain AM2010_962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_962 PF00989 PAS fold AM2010_962 PF00512 His Kinase A (phospho-acceptor) domain AM2010_963 PF02954 Bacterial regulatory protein, Fis family AM2010_963 PF00072 Response regulator receiver domain AM2010_963 PF00158 Sigma-54 interaction domain AM2010_964 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM2010_964 PF00512 His Kinase A (phospho-acceptor) domain AM2010_965 PF01207 Dihydrouridine synthase (Dus) AM2010_966 PF02542 YgbB family AM2010_966 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM2010_969 PF03364 Polyketide cyclase / dehydrase and lipid transport AM2010_97 PF02107 Flagellar L-ring protein AM2010_970 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM2010_970 PF04055 Radical SAM superfamily AM2010_974 PF00521 DNA gyrase/topoisomerase IV, subunit A AM2010_974 PF03989 DNA gyrase C-terminal domain, beta-propeller AM2010_976 PF01134 Glucose inhibited division protein A AM2010_98 PF02119 Flagellar P-ring protein AM2010_985 PF02780 Transketolase, C-terminal domain AM2010_985 PF02779 Transketolase, pyrimidine binding domain AM2010_985 PF00364 Biotin-requiring enzyme AM2010_986 PF00676 Dehydrogenase E1 component AM2010_988 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM2010_990 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM2010_990 PF12795 Mechanosensitive ion channel porin domain AM2010_990 PF00924 Mechanosensitive ion channel AM2010_994 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM2010_995 PF02899 Phage integrase, N-terminal SAM-like domain AM2010_995 PF00589 Phage integrase family AM2010_997 PF01202 Shikimate kinase AM2010_998 PF01761 3-dehydroquinate synthase