locus-tag class description A6F65_00001 PF00308 Bacterial dnaA protein A6F65_00001 PF11638 DnaA N-terminal domain A6F65_00001 PF08299 Bacterial dnaA protein helix-turn-helix A6F65_00002 PF00899 ThiF family A6F65_00005 PF02146 Sir2 family A6F65_00006 PF01113 Dihydrodipicolinate reductase, N-terminus A6F65_00006 PF05173 Dihydrodipicolinate reductase, C-terminus A6F65_00008 PF10576 Iron-sulfur binding domain of endonuclease III A6F65_00008 PF00633 Helix-hairpin-helix motif A6F65_00008 PF00730 HhH-GPD superfamily base excision DNA repair protein A6F65_00010 PF01389 OmpA-like transmembrane domain A6F65_00010 PF00691 OmpA family A6F65_00012 PF00375 Sodium:dicarboxylate symporter family A6F65_00013 PF01546 Peptidase family M20/M25/M40 A6F65_00013 PF07687 Peptidase dimerisation domain A6F65_00014 PF13417 Glutathione S-transferase, N-terminal domain A6F65_00014 PF00043 Glutathione S-transferase, C-terminal domain A6F65_00017 PF01926 50S ribosome-binding GTPase A6F65_00018 PF02096 60Kd inner membrane protein A6F65_00018 PF14849 YidC periplasmic domain A6F65_00019 PF01809 Putative membrane protein insertion efficiency factor A6F65_00020 PF00825 Ribonuclease P A6F65_00021 PF00468 Ribosomal protein L34 A6F65_00024 PF01078 Magnesium chelatase, subunit ChlI A6F65_00024 PF13335 Magnesium chelatase, subunit ChlI C-terminal A6F65_00026 PF13520 Amino acid permease A6F65_00029 PF00107 Zinc-binding dehydrogenase A6F65_00029 PF08240 Alcohol dehydrogenase GroES-like domain A6F65_00032 PF00378 Enoyl-CoA hydratase/isomerase A6F65_00036 PF01425 Amidase A6F65_00040 PF00392 Bacterial regulatory proteins, gntR family A6F65_00040 PF07729 FCD domain A6F65_00041 PF02515 CoA-transferase family III A6F65_00042 PF02515 CoA-transferase family III A6F65_00043 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6F65_00043 PF02770 Acyl-CoA dehydrogenase, middle domain A6F65_00043 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6F65_00045 PF03328 HpcH/HpaI aldolase/citrate lyase family A6F65_00047 PF01593 Flavin containing amine oxidoreductase A6F65_00048 PF07715 TonB-dependent Receptor Plug Domain A6F65_00048 PF00593 TonB dependent receptor A6F65_00050 PF07715 TonB-dependent Receptor Plug Domain A6F65_00050 PF00593 TonB dependent receptor A6F65_00053 PF02913 FAD linked oxidases, C-terminal domain A6F65_00053 PF01565 FAD binding domain A6F65_00053 PF13183 4Fe-4S dicluster domain A6F65_00056 PF00171 Aldehyde dehydrogenase family A6F65_00059 PF00857 Isochorismatase family A6F65_00062 PF00330 Aconitase family (aconitate hydratase) A6F65_00063 PF00694 Aconitase C-terminal domain A6F65_00064 PF00682 HMGL-like A6F65_00065 PF02515 CoA-transferase family III A6F65_00067 PF01037 Lrp/AsnC ligand binding domain A6F65_00068 PF03601 Conserved hypothetical protein 698 A6F65_00069 PF07690 Major Facilitator Superfamily A6F65_00071 PF16884 N-terminal domain of oxidoreductase A6F65_00071 PF00107 Zinc-binding dehydrogenase A6F65_00076 PF01209 ubiE/COQ5 methyltransferase family A6F65_00078 PF01638 HxlR-like helix-turn-helix A6F65_00081 PF00444 Ribosomal protein L36 A6F65_00082 PF01370 NAD dependent epimerase/dehydratase family A6F65_00084 PF00246 Zinc carboxypeptidase A6F65_00084 PF18027 Cytosolic carboxypeptidase N-terminal domain A6F65_00086 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6F65_00088 PF06793 Uncharacterised protein family (UPF0262) A6F65_00089 PF00772 DnaB-like helicase N terminal domain A6F65_00089 PF03796 DnaB-like helicase C terminal domain A6F65_00090 PF13091 PLD-like domain A6F65_00091 PF01192 RNA polymerase Rpb6 A6F65_00094 PF01434 Peptidase family M41 A6F65_00094 PF17862 AAA+ lid domain A6F65_00094 PF00004 ATPase family associated with various cellular activities (AAA) A6F65_00095 PF01238 Phosphomannose isomerase type I A6F65_00097 PF02634 FdhD/NarQ family A6F65_00099 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6F65_00099 PF12838 4Fe-4S dicluster domain A6F65_00099 PF00384 Molybdopterin oxidoreductase A6F65_00099 PF01568 Molydopterin dinucleotide binding domain A6F65_00099 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A6F65_00100 PF12804 MobA-like NTP transferase domain A6F65_00101 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A6F65_00101 PF00037 4Fe-4S binding domain A6F65_00101 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A6F65_00103 PF03466 LysR substrate binding domain A6F65_00103 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6F65_00105 PF17806 Sarcosine oxidase A3 domain A6F65_00105 PF01571 Aminomethyltransferase folate-binding domain A6F65_00105 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_00105 PF08669 Glycine cleavage T-protein C-terminal barrel domain A6F65_00107 PF01266 FAD dependent oxidoreductase A6F65_00110 PF01244 Membrane dipeptidase (Peptidase family M19) A6F65_00111 PF00171 Aldehyde dehydrogenase family A6F65_00112 PF03466 LysR substrate binding domain A6F65_00112 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6F65_00113 PF02615 Malate/L-lactate dehydrogenase A6F65_00114 PF13181 Tetratricopeptide repeat A6F65_00115 PF07715 TonB-dependent Receptor Plug Domain A6F65_00115 PF00593 TonB dependent receptor A6F65_00116 PF02028 BCCT, betaine/carnitine/choline family transporter A6F65_00117 PF01268 Formate--tetrahydrofolate ligase A6F65_00118 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6F65_00118 PF03466 LysR substrate binding domain A6F65_00119 PF02028 BCCT, betaine/carnitine/choline family transporter A6F65_00120 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A6F65_00120 PF00355 Rieske [2Fe-2S] domain A6F65_00121 PF00171 Aldehyde dehydrogenase family A6F65_00122 PF00557 Metallopeptidase family M24 A6F65_00123 PF16350 FAD dependent oxidoreductase central domain A6F65_00123 PF01571 Aminomethyltransferase folate-binding domain A6F65_00123 PF01266 FAD dependent oxidoreductase A6F65_00123 PF08669 Glycine cleavage T-protein C-terminal barrel domain A6F65_00124 PF06253 Trimethylamine methyltransferase (MTTB) A6F65_00127 PF00809 Pterin binding enzyme A6F65_00131 PF02310 B12 binding domain A6F65_00131 PF02607 B12 binding domain A6F65_00132 PF12833 Helix-turn-helix domain A6F65_00132 PF01965 DJ-1/PfpI family A6F65_00135 PF02668 Taurine catabolism dioxygenase TauD, TfdA family A6F65_00135 PF06155 Protein of unknown function (DUF971) A6F65_00137 PF08669 Glycine cleavage T-protein C-terminal barrel domain A6F65_00137 PF01571 Aminomethyltransferase folate-binding domain A6F65_00137 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_00137 PF17806 Sarcosine oxidase A3 domain A6F65_00138 PF04267 Sarcosine oxidase, delta subunit family A6F65_00139 PF01266 FAD dependent oxidoreductase A6F65_00140 PF01571 Aminomethyltransferase folate-binding domain A6F65_00140 PF01266 FAD dependent oxidoreductase A6F65_00140 PF08669 Glycine cleavage T-protein C-terminal barrel domain A6F65_00140 PF16350 FAD dependent oxidoreductase central domain A6F65_00141 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A6F65_00141 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A6F65_00143 PF04851 Type III restriction enzyme, res subunit A6F65_00144 PF07669 Eco57I restriction-modification methylase A6F65_00149 PF12728 Helix-turn-helix domain A6F65_00151 PF14659 Phage integrase, N-terminal SAM-like domain A6F65_00151 PF13356 Arm DNA-binding domain A6F65_00151 PF00589 Phage integrase family A6F65_00155 PF01145 SPFH domain / Band 7 family A6F65_00155 PF16200 C-terminal region of band_7 A6F65_00157 PF00085 Thioredoxin A6F65_00158 PF00085 Thioredoxin A6F65_00164 PF03060 Nitronate monooxygenase A6F65_00166 PF00696 Amino acid kinase family A6F65_00166 PF01842 ACT domain A6F65_00166 PF13840 ACT domain A6F65_00168 PF03009 Glycerophosphoryl diester phosphodiesterase family A6F65_00169 PF03960 ArsC family A6F65_00172 PF02075 Crossover junction endodeoxyribonuclease RuvC A6F65_00174 PF01709 Transcriptional regulator A6F65_00176 PF01906 Putative heavy-metal-binding A6F65_00177 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) A6F65_00179 PF02887 Pyruvate kinase, alpha/beta domain A6F65_00179 PF00224 Pyruvate kinase, barrel domain A6F65_00180 PF01794 Ferric reductase like transmembrane component A6F65_00182 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6F65_00184 PF05000 RNA polymerase Rpb1, domain 4 A6F65_00184 PF00623 RNA polymerase Rpb1, domain 2 A6F65_00184 PF04983 RNA polymerase Rpb1, domain 3 A6F65_00184 PF04998 RNA polymerase Rpb1, domain 5 A6F65_00184 PF04997 RNA polymerase Rpb1, domain 1 A6F65_00185 PF04560 RNA polymerase Rpb2, domain 7 A6F65_00185 PF00562 RNA polymerase Rpb2, domain 6 A6F65_00185 PF10385 RNA polymerase beta subunit external 1 domain A6F65_00185 PF04565 RNA polymerase Rpb2, domain 3 A6F65_00185 PF04561 RNA polymerase Rpb2, domain 2 A6F65_00185 PF04563 RNA polymerase beta subunit A6F65_00188 PF13443 Cro/C1-type HTH DNA-binding domain A6F65_00191 PF00466 Ribosomal protein L10 A6F65_00192 PF16320 Ribosomal protein L7/L12 dimerisation domain A6F65_00192 PF00542 Ribosomal protein L7/L12 C-terminal domain A6F65_00195 PF12697 Alpha/beta hydrolase family A6F65_00196 PF02254 TrkA-N domain A6F65_00196 PF00999 Sodium/hydrogen exchanger family A6F65_00197 PF01554 MatE A6F65_00198 PF00166 Chaperonin 10 Kd subunit A6F65_00199 PF00118 TCP-1/cpn60 chaperonin family A6F65_00203 PF01367 5'-3' exonuclease, C-terminal SAM fold A6F65_00203 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A6F65_00203 PF01612 3'-5' exonuclease A6F65_00203 PF00476 DNA polymerase family A A6F65_00204 PF07536 HWE histidine kinase A6F65_00204 PF13581 Histidine kinase-like ATPase domain A6F65_00204 PF13426 PAS domain A6F65_00206 PF17862 AAA+ lid domain A6F65_00206 PF01434 Peptidase family M41 A6F65_00206 PF00004 ATPase family associated with various cellular activities (AAA) A6F65_00206 PF06480 FtsH Extracellular A6F65_00207 PF01144 Coenzyme A transferase A6F65_00209 PF01144 Coenzyme A transferase A6F65_00210 PF07690 Major Facilitator Superfamily A6F65_00216 PF02772 S-adenosylmethionine synthetase, central domain A6F65_00216 PF02773 S-adenosylmethionine synthetase, C-terminal domain A6F65_00216 PF00438 S-adenosylmethionine synthetase, N-terminal domain A6F65_00217 PF00795 Carbon-nitrogen hydrolase A6F65_00219 PF17827 PrmC N-terminal domain A6F65_00219 PF13847 Methyltransferase domain A6F65_00220 PF03462 PCRF domain A6F65_00220 PF00472 RF-1 domain A6F65_00221 PF13393 Histidyl-tRNA synthetase A6F65_00222 PF00719 Inorganic pyrophosphatase A6F65_00223 PF00365 Phosphofructokinase A6F65_00225 PF00924 Mechanosensitive ion channel A6F65_00227 PF00005 ABC transporter A6F65_00228 PF04963 Sigma-54 factor, core binding domain A6F65_00228 PF00309 Sigma-54 factor, Activator interacting domain (AID) A6F65_00228 PF04552 Sigma-54, DNA binding domain A6F65_00229 PF00486 Transcriptional regulatory protein, C terminal A6F65_00229 PF00072 Response regulator receiver domain A6F65_00230 PF02390 Putative methyltransferase A6F65_00231 PF04307 LexA-binding, inner membrane-associated putative hydrolase A6F65_00232 PF00849 RNA pseudouridylate synthase A6F65_00233 PF00484 Carbonic anhydrase A6F65_00234 PF03949 Malic enzyme, NAD binding domain A6F65_00234 PF00390 Malic enzyme, N-terminal domain A6F65_00234 PF01515 Phosphate acetyl/butaryl transferase A6F65_00235 PF00488 MutS domain V A6F65_00235 PF05190 MutS family domain IV A6F65_00235 PF01624 MutS domain I A6F65_00235 PF05188 MutS domain II A6F65_00235 PF05192 MutS domain III A6F65_00238 PF01923 Cobalamin adenosyltransferase A6F65_00240 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6F65_00243 PF00266 Aminotransferase class-V A6F65_00244 PF03301 Tryptophan 2,3-dioxygenase A6F65_00246 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6F65_00248 PF01258 Prokaryotic dksA/traR C4-type zinc finger A6F65_00255 PF00072 Response regulator receiver domain A6F65_00257 PF00155 Aminotransferase class I and II A6F65_00258 PF02566 OsmC-like protein A6F65_00263 PF04860 Phage portal protein A6F65_00279 PF00080 Copper/zinc superoxide dismutase (SODC) A6F65_00280 PF06508 Queuosine biosynthesis protein QueC A6F65_00281 PF01430 Hsp33 protein A6F65_00282 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6F65_00282 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6F65_00283 PF00202 Aminotransferase class-III A6F65_00284 PF00313 'Cold-shock' DNA-binding domain A6F65_00285 PF03741 Integral membrane protein TerC family A6F65_00285 PF03471 Transporter associated domain A6F65_00287 PF04116 Fatty acid hydroxylase superfamily A6F65_00288 PF00691 OmpA family A6F65_00289 PF00909 Ammonium Transporter Family A6F65_00290 PF00543 Nitrogen regulatory protein P-II A6F65_00293 PF00009 Elongation factor Tu GTP binding domain A6F65_00293 PF16658 Class II release factor RF3, C-terminal domain A6F65_00294 PF00106 short chain dehydrogenase A6F65_00295 PF03483 B3/4 domain A6F65_00295 PF03147 Ferredoxin-fold anticodon binding domain A6F65_00295 PF01588 Putative tRNA binding domain A6F65_00295 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A6F65_00295 PF03484 tRNA synthetase B5 domain A6F65_00296 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A6F65_00296 PF01409 tRNA synthetases class II core domain (F) A6F65_00297 PF00453 Ribosomal protein L20 A6F65_00298 PF01632 Ribosomal protein L35 A6F65_00299 PF00459 Inositol monophosphatase family A6F65_00301 PF14572 Phosphoribosyl synthetase-associated domain A6F65_00301 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A6F65_00302 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A6F65_00303 PF01842 ACT domain A6F65_00303 PF00742 Homoserine dehydrogenase A6F65_00303 PF03447 Homoserine dehydrogenase, NAD binding domain A6F65_00306 PF01618 MotA/TolQ/ExbB proton channel family A6F65_00307 PF02472 Biopolymer transport protein ExbD/TolR A6F65_00310 PF08494 DEAD/H associated A6F65_00310 PF00270 DEAD/DEAH box helicase A6F65_00310 PF00271 Helicase conserved C-terminal domain A6F65_00312 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6F65_00312 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6F65_00312 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6F65_00312 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6F65_00314 PF13614 AAA domain A6F65_00314 PF00376 MerR family regulatory protein A6F65_00315 PF02569 Pantoate-beta-alanine ligase A6F65_00316 PF00266 Aminotransferase class-V A6F65_00317 PF02347 Glycine cleavage system P-protein A6F65_00318 PF01597 Glycine cleavage H-protein A6F65_00319 PF08669 Glycine cleavage T-protein C-terminal barrel domain A6F65_00319 PF01571 Aminomethyltransferase folate-binding domain A6F65_00320 PF01274 Malate synthase A6F65_00322 PF00463 Isocitrate lyase family A6F65_00323 PF06114 IrrE N-terminal-like domain A6F65_00323 PF09856 Predicted transcriptional regulator (DUF2083) A6F65_00323 PF01381 Helix-turn-helix A6F65_00325 PF00691 OmpA family A6F65_00325 PF00223 Photosystem I psaA/psaB protein A6F65_00327 PF00156 Phosphoribosyl transferase domain A6F65_00328 PF02167 Cytochrome C1 family A6F65_00329 PF00032 Cytochrome b(C-terminal)/b6/petD A6F65_00329 PF00033 Cytochrome b/b6/petB A6F65_00330 PF00355 Rieske [2Fe-2S] domain A6F65_00330 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal A6F65_00332 PF17432 Domain of unknown function (DUF3458_C) ARM repeats A6F65_00332 PF11940 Domain of unknown function (DUF3458) Ig-like fold A6F65_00332 PF01433 Peptidase family M1 domain A6F65_00337 PF03703 Bacterial PH domain A6F65_00341 PF00300 Histidine phosphatase superfamily (branch 1) A6F65_00342 PF00731 AIR carboxylase A6F65_00343 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A6F65_00343 PF02222 ATP-grasp domain A6F65_00344 PF00186 Dihydrofolate reductase A6F65_00345 PF01244 Membrane dipeptidase (Peptidase family M19) A6F65_00346 PF06574 FAD synthetase A6F65_00346 PF01687 Riboflavin kinase A6F65_00347 PF08264 Anticodon-binding domain of tRNA A6F65_00347 PF00133 tRNA synthetases class I (I, L, M and V) A6F65_00348 PF01252 Signal peptidase (SPase) II A6F65_00350 PF00571 CBS domain A6F65_00350 PF03471 Transporter associated domain A6F65_00350 PF01595 Cyclin M transmembrane N-terminal domain A6F65_00351 PF00691 OmpA family A6F65_00351 PF13488 Glycine zipper A6F65_00352 PF00459 Inositol monophosphatase family A6F65_00353 PF08442 ATP-grasp domain A6F65_00353 PF00549 CoA-ligase A6F65_00356 PF01012 Electron transfer flavoprotein domain A6F65_00357 PF01012 Electron transfer flavoprotein domain A6F65_00357 PF00766 Electron transfer flavoprotein FAD-binding domain A6F65_00360 PF04286 Protein of unknown function (DUF445) A6F65_00361 PF00873 AcrB/AcrD/AcrF family A6F65_00362 PF13533 Biotin-lipoyl like A6F65_00369 PF00144 Beta-lactamase A6F65_00370 PF02567 Phenazine biosynthesis-like protein A6F65_00371 PF16916 Dimerisation domain of Zinc Transporter A6F65_00371 PF01545 Cation efflux family A6F65_00372 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A6F65_00372 PF01243 Pyridoxamine 5'-phosphate oxidase A6F65_00373 PF00226 DnaJ domain A6F65_00373 PF01556 DnaJ C terminal domain A6F65_00374 PF03631 Virulence factor BrkB A6F65_00376 PF16363 GDP-mannose 4,6 dehydratase A6F65_00377 PF01370 NAD dependent epimerase/dehydratase family A6F65_00381 PF13180 PDZ domain A6F65_00381 PF03572 Peptidase family S41 A6F65_00382 PF01551 Peptidase family M23 A6F65_00383 PF02590 Predicted SPOUT methyltransferase A6F65_00385 PF01467 Cytidylyltransferase-like A6F65_00386 PF00171 Aldehyde dehydrogenase family A6F65_00387 PF08525 Opacity-associated protein A N-terminal motif A6F65_00387 PF01476 LysM domain A6F65_00387 PF01551 Peptidase family M23 A6F65_00390 PF08240 Alcohol dehydrogenase GroES-like domain A6F65_00390 PF00107 Zinc-binding dehydrogenase A6F65_00392 PF10431 C-terminal, D2-small domain, of ClpB protein A6F65_00392 PF17871 AAA lid domain A6F65_00392 PF00004 ATPase family associated with various cellular activities (AAA) A6F65_00392 PF07724 AAA domain (Cdc48 subfamily) A6F65_00392 PF02861 Clp amino terminal domain, pathogenicity island component A6F65_00394 PF04679 ATP dependent DNA ligase C terminal region A6F65_00394 PF04675 DNA ligase N terminus A6F65_00394 PF01068 ATP dependent DNA ligase domain A6F65_00396 PF01068 ATP dependent DNA ligase domain A6F65_00396 PF04675 DNA ligase N terminus A6F65_00396 PF04679 ATP dependent DNA ligase C terminal region A6F65_00398 PF00132 Bacterial transferase hexapeptide (six repeats) A6F65_00401 PF00490 Delta-aminolevulinic acid dehydratase A6F65_00402 PF04225 Opacity-associated protein A LysM-like domain A6F65_00402 PF01551 Peptidase family M23 A6F65_00404 PF01479 S4 domain A6F65_00404 PF00163 Ribosomal protein S4/S9 N-terminal domain A6F65_00405 PF11953 Domain of unknown function (DUF3470) A6F65_00405 PF00037 4Fe-4S binding domain A6F65_00407 PF02559 CarD-like/TRCF domain A6F65_00411 PF01300 Telomere recombination A6F65_00412 PF07995 Glucose / Sorbosone dehydrogenase A6F65_00413 PF13185 GAF domain A6F65_00418 PF17762 HTH domain found in ParB protein A6F65_00418 PF02195 ParB-like nuclease domain A6F65_00419 PF13614 AAA domain A6F65_00420 PF02527 rRNA small subunit methyltransferase G A6F65_00421 PF13932 GidA associated domain A6F65_00421 PF01134 Glucose inhibited division protein A A6F65_00422 PF12631 MnmE helical domain A6F65_00422 PF10396 GTP-binding protein TrmE N-terminus A6F65_00422 PF01926 50S ribosome-binding GTPase A6F65_00424 PF01738 Dienelactone hydrolase family A6F65_00425 PF01645 Conserved region in glutamate synthase A6F65_00428 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6F65_00428 PF07498 Rho termination factor, N-terminal domain A6F65_00428 PF07497 Rho termination factor, RNA-binding domain A6F65_00430 PF01208 Uroporphyrinogen decarboxylase (URO-D) A6F65_00431 PF03618 Kinase/pyrophosphorylase A6F65_00432 PF02545 Maf-like protein A6F65_00433 PF08501 Shikimate dehydrogenase substrate binding domain A6F65_00433 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A6F65_00434 PF01121 Dephospho-CoA kinase A6F65_00435 PF00929 Exonuclease A6F65_00436 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A6F65_00436 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus A6F65_00437 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6F65_00442 PF01521 Iron-sulphur cluster biosynthesis A6F65_00443 PF00571 CBS domain A6F65_00446 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region A6F65_00446 PF07676 WD40-like Beta Propeller Repeat A6F65_00446 PF00326 Prolyl oligopeptidase family A6F65_00448 PF02321 Outer membrane efflux protein A6F65_00450 PF05681 Fumarate hydratase (Fumerase) A6F65_00450 PF05683 Fumarase C-terminus A6F65_00451 PF02743 Cache domain A6F65_00451 PF06580 Histidine kinase A6F65_00451 PF00672 HAMP domain A6F65_00451 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_00452 PF00072 Response regulator receiver domain A6F65_00452 PF04397 LytTr DNA-binding domain A6F65_00456 PF00380 Ribosomal protein S9/S16 A6F65_00457 PF00572 Ribosomal protein L13 A6F65_00460 PF02628 Cytochrome oxidase assembly protein A6F65_00462 PF05690 Thiazole biosynthesis protein ThiG A6F65_00465 PF00501 AMP-binding enzyme A6F65_00467 PF01180 Dihydroorotate dehydrogenase A6F65_00468 PF02082 Transcriptional regulator A6F65_00469 PF01458 Uncharacterized protein family (UPF0051) A6F65_00471 PF00005 ABC transporter A6F65_00472 PF01458 Uncharacterized protein family (UPF0051) A6F65_00473 PF00266 Aminotransferase class-V A6F65_00474 PF01883 Iron-sulfur cluster assembly protein A6F65_00476 PF01521 Iron-sulphur cluster biosynthesis A6F65_00479 PF00294 pfkB family carbohydrate kinase A6F65_00481 PF02844 Phosphoribosylglycinamide synthetase, N domain A6F65_00481 PF02843 Phosphoribosylglycinamide synthetase, C domain A6F65_00481 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A6F65_00482 PF13742 OB-fold nucleic acid binding domain A6F65_00482 PF02601 Exonuclease VII, large subunit A6F65_00484 PF01551 Peptidase family M23 A6F65_00486 PF13181 Tetratricopeptide repeat A6F65_00487 PF13181 Tetratricopeptide repeat A6F65_00488 PF00830 Ribosomal L28 family A6F65_00489 PF14437 MafB19-like deaminase A6F65_00492 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A6F65_00492 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A6F65_00493 PF04397 LytTr DNA-binding domain A6F65_00493 PF00072 Response regulator receiver domain A6F65_00494 PF07694 5TMR of 5TMR-LYT A6F65_00494 PF06580 Histidine kinase A6F65_00494 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_00496 PF01435 Peptidase family M48 A6F65_00505 PF06956 Regulator of RNA terminal phosphate cyclase A6F65_00505 PF00158 Sigma-54 interaction domain A6F65_00507 PF01139 tRNA-splicing ligase RtcB A6F65_00509 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain A6F65_00509 PF01137 RNA 3'-terminal phosphate cyclase A6F65_00510 PF00753 Metallo-beta-lactamase superfamily A6F65_00511 PF04143 Sulphur transport A6F65_00513 PF10459 Peptidase S46 A6F65_00514 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation A6F65_00514 PF14508 Glycosyl-hydrolase 97 N-terminal A6F65_00514 PF10566 Glycoside hydrolase 97 A6F65_00516 PF00216 Bacterial DNA-binding protein A6F65_00517 PF00392 Bacterial regulatory proteins, gntR family A6F65_00517 PF07702 UTRA domain A6F65_00518 PF00854 POT family A6F65_00519 PF00449 Urease alpha-subunit, N-terminal domain A6F65_00519 PF01979 Amidohydrolase family A6F65_00525 PF02779 Transketolase, pyrimidine binding domain A6F65_00525 PF02780 Transketolase, C-terminal domain A6F65_00525 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A6F65_00527 PF01625 Peptide methionine sulfoxide reductase A6F65_00530 PF01808 AICARFT/IMPCHase bienzyme A6F65_00530 PF02142 MGS-like domain A6F65_00532 PF00834 Ribulose-phosphate 3 epimerase family A6F65_00541 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_00541 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6F65_00544 PF01641 SelR domain A6F65_00546 PF00005 ABC transporter A6F65_00546 PF13732 Domain of unknown function (DUF4162) A6F65_00547 PF08331 Domain of unknown function (DUF1730) A6F65_00548 PF14759 Reductase C-terminal A6F65_00548 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_00549 PF05088 Bacterial NAD-glutamate dehydrogenase A6F65_00552 PF02397 Bacterial sugar transferase A6F65_00555 PF00133 tRNA synthetases class I (I, L, M and V) A6F65_00555 PF08264 Anticodon-binding domain of tRNA A6F65_00555 PF13603 Leucyl-tRNA synthetase, Domain 2 A6F65_00563 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A6F65_00564 PF00483 Nucleotidyl transferase A6F65_00565 PF01551 Peptidase family M23 A6F65_00565 PF01476 LysM domain A6F65_00565 PF08525 Opacity-associated protein A N-terminal motif A6F65_00566 PF04305 Protein of unknown function (DUF455) A6F65_00567 PF00578 AhpC/TSA family A6F65_00568 PF03710 Glutamate-ammonia ligase adenylyltransferase A6F65_00568 PF08335 GlnD PII-uridylyltransferase A6F65_00570 PF04371 Porphyromonas-type peptidyl-arginine deiminase A6F65_00574 PF03129 Anticodon binding domain A6F65_00574 PF02824 TGS domain A6F65_00574 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6F65_00574 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6F65_00583 PF13614 AAA domain A6F65_00583 PF13807 G-rich domain on putative tyrosine kinase A6F65_00583 PF02706 Chain length determinant protein A6F65_00587 PF00534 Glycosyl transferases group 1 A6F65_00587 PF13439 Glycosyltransferase Family 4 A6F65_00591 PF00535 Glycosyl transferase family 2 A6F65_00592 PF13579 Glycosyl transferase 4-like domain A6F65_00592 PF00534 Glycosyl transferases group 1 A6F65_00593 PF01370 NAD dependent epimerase/dehydratase family A6F65_00594 PF16363 GDP-mannose 4,6 dehydratase A6F65_00598 PF00476 DNA polymerase family A A6F65_00598 PF01612 3'-5' exonuclease A6F65_00599 PF03167 Uracil DNA glycosylase superfamily A6F65_00600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6F65_00600 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_00601 PF04898 Glutamate synthase central domain A6F65_00601 PF00310 Glutamine amidotransferases class-II A6F65_00601 PF01645 Conserved region in glutamate synthase A6F65_00601 PF01493 GXGXG motif A6F65_00603 PF00534 Glycosyl transferases group 1 A6F65_00608 PF00005 ABC transporter A6F65_00608 PF00664 ABC transporter transmembrane region A6F65_00609 PF05649 Peptidase family M13 A6F65_00609 PF01431 Peptidase family M13 A6F65_00610 PF02673 Bacitracin resistance protein BacA A6F65_00613 PF00351 Biopterin-dependent aromatic amino acid hydroxylase A6F65_00616 PF00271 Helicase conserved C-terminal domain A6F65_00616 PF09382 RQC domain A6F65_00616 PF00270 DEAD/DEAH box helicase A6F65_00616 PF00570 HRDC domain A6F65_00616 PF16124 RecQ zinc-binding A6F65_00619 PF01258 Prokaryotic dksA/traR C4-type zinc finger A6F65_00620 PF02666 Phosphatidylserine decarboxylase A6F65_00622 PF00925 GTP cyclohydrolase II A6F65_00625 PF00471 Ribosomal protein L33 A6F65_00626 PF00472 RF-1 domain A6F65_00627 PF00849 RNA pseudouridylate synthase A6F65_00629 PF00117 Glutamine amidotransferase class-I A6F65_00629 PF00425 chorismate binding enzyme A6F65_00629 PF04715 Anthranilate synthase component I, N terminal region A6F65_00630 PF05872 Bacterial protein of unknown function (DUF853) A6F65_00632 PF01433 Peptidase family M1 domain A6F65_00633 PF00672 HAMP domain A6F65_00633 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_00633 PF00512 His Kinase A (phospho-acceptor) domain A6F65_00634 PF00072 Response regulator receiver domain A6F65_00634 PF00486 Transcriptional regulatory protein, C terminal A6F65_00637 PF00326 Prolyl oligopeptidase family A6F65_00637 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A6F65_00639 PF00270 DEAD/DEAH box helicase A6F65_00639 PF00271 Helicase conserved C-terminal domain A6F65_00641 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A6F65_00641 PF17854 FtsK alpha domain A6F65_00641 PF09397 Ftsk gamma domain A6F65_00641 PF01580 FtsK/SpoIIIE family A6F65_00643 PF01168 Alanine racemase, N-terminal domain A6F65_00646 PF01966 HD domain A6F65_00646 PF03445 Putative nucleotidyltransferase DUF294 A6F65_00646 PF08335 GlnD PII-uridylyltransferase A6F65_00647 PF01790 Prolipoprotein diacylglyceryl transferase A6F65_00650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6F65_00650 PF02770 Acyl-CoA dehydrogenase, middle domain A6F65_00650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6F65_00651 PF01039 Carboxyl transferase domain A6F65_00657 PF00986 DNA gyrase B subunit, carboxyl terminus A6F65_00657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_00657 PF01751 Toprim domain A6F65_00657 PF00204 DNA gyrase B A6F65_00658 PF03313 Serine dehydratase alpha chain A6F65_00658 PF03315 Serine dehydratase beta chain A6F65_00659 PF00117 Glutamine amidotransferase class-I A6F65_00659 PF00958 GMP synthase C terminal domain A6F65_00659 PF02540 NAD synthase A6F65_00660 PF00144 Beta-lactamase A6F65_00663 PF00730 HhH-GPD superfamily base excision DNA repair protein A6F65_00663 PF00633 Helix-hairpin-helix motif A6F65_00665 PF12833 Helix-turn-helix domain A6F65_00665 PF01965 DJ-1/PfpI family A6F65_00670 PF00005 ABC transporter A6F65_00672 PF00890 FAD binding domain A6F65_00672 PF02910 Fumarate reductase flavoprotein C-term A6F65_00674 PF00144 Beta-lactamase A6F65_00676 PF00317 Ribonucleotide reductase, all-alpha domain A6F65_00676 PF03477 ATP cone domain A6F65_00676 PF02867 Ribonucleotide reductase, barrel domain A6F65_00688 PF04480 Protein of unknown function (DUF559) A6F65_00694 PF03976 Polyphosphate kinase 2 (PPK2) A6F65_00696 PF00696 Amino acid kinase family A6F65_00698 PF02325 YGGT family A6F65_00699 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A6F65_00699 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A6F65_00701 PF01914 MarC family integral membrane protein A6F65_00703 PF00085 Thioredoxin A6F65_00705 PF07715 TonB-dependent Receptor Plug Domain A6F65_00705 PF00593 TonB dependent receptor A6F65_00706 PF03435 Saccharopine dehydrogenase NADP binding domain A6F65_00707 PF00692 dUTPase A6F65_00708 PF00171 Aldehyde dehydrogenase family A6F65_00708 PF01619 Proline dehydrogenase A6F65_00708 PF14850 DNA-binding domain of Proline dehydrogenase A6F65_00708 PF18327 Proline utilization A proline dehydrogenase N-terminal domain A6F65_00711 PF00672 HAMP domain A6F65_00711 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_00711 PF00512 His Kinase A (phospho-acceptor) domain A6F65_00712 PF00072 Response regulator receiver domain A6F65_00712 PF00486 Transcriptional regulatory protein, C terminal A6F65_00713 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6F65_00713 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_00714 PF01039 Carboxyl transferase domain A6F65_00717 PF00378 Enoyl-CoA hydratase/isomerase A6F65_00721 PF02785 Biotin carboxylase C-terminal domain A6F65_00721 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6F65_00721 PF00289 Biotin carboxylase, N-terminal domain A6F65_00721 PF00364 Biotin-requiring enzyme A6F65_00724 PF02687 FtsX-like permease family A6F65_00724 PF00005 ABC transporter A6F65_00724 PF12704 MacB-like periplasmic core domain A6F65_00726 PF02321 Outer membrane efflux protein A6F65_00729 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6F65_00729 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6F65_00729 PF14579 Helix-hairpin-helix motif A6F65_00729 PF01336 OB-fold nucleic acid binding domain A6F65_00729 PF02811 PHP domain A6F65_00730 PF08447 PAS fold A6F65_00730 PF07536 HWE histidine kinase A6F65_00730 PF13426 PAS domain A6F65_00731 PF03705 CheR methyltransferase, all-alpha domain A6F65_00731 PF08448 PAS fold A6F65_00731 PF01739 CheR methyltransferase, SAM binding domain A6F65_00731 PF01339 CheB methylesterase A6F65_00734 PF00067 Cytochrome P450 A6F65_00735 PF03062 MBOAT, membrane-bound O-acyltransferase family A6F65_00739 PF00356 Bacterial regulatory proteins, lacI family A6F65_00742 PF02435 Levansucrase/Invertase A6F65_00743 PF00480 ROK family A6F65_00746 PF13717 zinc-ribbon domain A6F65_00747 PF00005 ABC transporter A6F65_00750 PF01553 Acyltransferase A6F65_00751 PF02153 Prephenate dehydrogenase A6F65_00752 PF00155 Aminotransferase class I and II A6F65_00753 PF00561 alpha/beta hydrolase fold A6F65_00754 PF07021 Methionine biosynthesis protein MetW A6F65_00754 PF00561 alpha/beta hydrolase fold A6F65_00755 PF00756 Putative esterase A6F65_00758 PF08240 Alcohol dehydrogenase GroES-like domain A6F65_00758 PF00107 Zinc-binding dehydrogenase A6F65_00762 PF00743 Flavin-binding monooxygenase-like A6F65_00763 PF18146 Damage-inducible protein CinA KH domain A6F65_00763 PF02464 Competence-damaged protein A6F65_00763 PF00994 Probable molybdopterin binding domain A6F65_00765 PF00687 Ribosomal protein L1p/L10e family A6F65_00766 PF00298 Ribosomal protein L11, RNA binding domain A6F65_00766 PF03946 Ribosomal protein L11, N-terminal domain A6F65_00769 PF02357 Transcription termination factor nusG A6F65_00769 PF00467 KOW motif A6F65_00770 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A6F65_00771 PF01235 Sodium:alanine symporter family A6F65_00776 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A6F65_00781 PF00501 AMP-binding enzyme A6F65_00790 PF08446 PAS fold A6F65_00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_00790 PF01590 GAF domain A6F65_00790 PF00512 His Kinase A (phospho-acceptor) domain A6F65_00790 PF00360 Phytochrome region A6F65_00791 PF01050 Mannose-6-phosphate isomerase A6F65_00791 PF00483 Nucleotidyl transferase A6F65_00793 PF00072 Response regulator receiver domain A6F65_00793 PF00158 Sigma-54 interaction domain A6F65_00793 PF02954 Bacterial regulatory protein, Fis family A6F65_00794 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_00794 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6F65_00794 PF00512 His Kinase A (phospho-acceptor) domain A6F65_00794 PF00072 Response regulator receiver domain A6F65_00798 PF07690 Major Facilitator Superfamily A6F65_00799 PF00144 Beta-lactamase A6F65_00801 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A6F65_00802 PF00795 Carbon-nitrogen hydrolase A6F65_00802 PF02540 NAD synthase A6F65_00804 PF01625 Peptide methionine sulfoxide reductase A6F65_00805 PF00561 alpha/beta hydrolase fold A6F65_00806 PF01029 NusB family A6F65_00806 PF01189 16S rRNA methyltransferase RsmB/F A6F65_00809 PF00762 Ferrochelatase A6F65_00810 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase A6F65_00810 PF00034 Cytochrome c A6F65_00810 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6F65_00811 PF01883 Iron-sulfur cluster assembly protein A6F65_00811 PF10609 NUBPL iron-transfer P-loop NTPase A6F65_00812 PF01145 SPFH domain / Band 7 family A6F65_00814 PF13180 PDZ domain A6F65_00815 PF17092 Penicillin-binding protein OB-like domain A6F65_00815 PF00912 Transglycosylase A6F65_00815 PF00905 Penicillin binding protein transpeptidase domain A6F65_00816 PF01641 SelR domain A6F65_00817 PF00043 Glutathione S-transferase, C-terminal domain A6F65_00817 PF13417 Glutathione S-transferase, N-terminal domain A6F65_00818 PF13614 AAA domain A6F65_00820 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_00824 PF13614 AAA domain A6F65_00824 PF13807 G-rich domain on putative tyrosine kinase A6F65_00824 PF02706 Chain length determinant protein A6F65_00828 PF00132 Bacterial transferase hexapeptide (six repeats) A6F65_00829 PF08241 Methyltransferase domain A6F65_00834 PF03808 Glycosyl transferase WecB/TagA/CpsF family A6F65_00835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A6F65_00835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A6F65_00835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A6F65_00836 PF02350 UDP-N-acetylglucosamine 2-epimerase A6F65_00837 PF00535 Glycosyl transferase family 2 A6F65_00838 PF16363 GDP-mannose 4,6 dehydratase A6F65_00839 PF04321 RmlD substrate binding domain A6F65_00840 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase A6F65_00841 PF00483 Nucleotidyl transferase A6F65_00842 PF00005 ABC transporter A6F65_00842 PF00664 ABC transporter transmembrane region A6F65_00845 PF00128 Alpha amylase, catalytic domain A6F65_00846 PF02806 Alpha amylase, C-terminal all-beta domain A6F65_00846 PF00128 Alpha amylase, catalytic domain A6F65_00846 PF03714 Bacterial pullanase-associated domain A6F65_00849 PF00356 Bacterial regulatory proteins, lacI family A6F65_00852 PF00155 Aminotransferase class I and II A6F65_00854 PF00677 Lumazine binding domain A6F65_00855 PF01872 RibD C-terminal domain A6F65_00855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6F65_00859 PF03692 Putative zinc- or iron-chelating domain A6F65_00860 PF02630 SCO1/SenC A6F65_00864 PF02421 Ferrous iron transport protein B A6F65_00864 PF07664 Ferrous iron transport protein B C terminus A6F65_00864 PF07670 Nucleoside recognition A6F65_00865 PF00436 Single-strand binding protein family A6F65_00866 PF01794 Ferric reductase like transmembrane component A6F65_00870 PF00227 Proteasome subunit A6F65_00874 PF07724 AAA domain (Cdc48 subfamily) A6F65_00874 PF00004 ATPase family associated with various cellular activities (AAA) A6F65_00876 PF00916 Sulfate permease family A6F65_00876 PF01740 STAS domain A6F65_00878 PF00005 ABC transporter A6F65_00878 PF00664 ABC transporter transmembrane region A6F65_00888 PF00270 DEAD/DEAH box helicase A6F65_00888 PF00271 Helicase conserved C-terminal domain A6F65_00888 PF03880 DbpA RNA binding domain A6F65_00889 PF02028 BCCT, betaine/carnitine/choline family transporter A6F65_00890 PF00459 Inositol monophosphatase family A6F65_00891 PF00009 Elongation factor Tu GTP binding domain A6F65_00892 PF01507 Phosphoadenosine phosphosulfate reductase family A6F65_00894 PF00356 Bacterial regulatory proteins, lacI family A6F65_00896 PF01451 Low molecular weight phosphotyrosine protein phosphatase A6F65_00898 PF00378 Enoyl-CoA hydratase/isomerase A6F65_00899 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6F65_00899 PF02770 Acyl-CoA dehydrogenase, middle domain A6F65_00899 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6F65_00904 PF03806 AbgT putative transporter family A6F65_00907 PF00884 Sulfatase A6F65_00907 PF16347 Domain of unknown function (DUF4976) A6F65_00908 PF14310 Fibronectin type III-like domain A6F65_00908 PF00933 Glycosyl hydrolase family 3 N terminal domain A6F65_00908 PF01915 Glycosyl hydrolase family 3 C-terminal domain A6F65_00909 PF00356 Bacterial regulatory proteins, lacI family A6F65_00910 PF07690 Major Facilitator Superfamily A6F65_00911 PF00884 Sulfatase A6F65_00911 PF16347 Domain of unknown function (DUF4976) A6F65_00912 PF16347 Domain of unknown function (DUF4976) A6F65_00912 PF00884 Sulfatase A6F65_00914 PF00884 Sulfatase A6F65_00916 PF12951 Passenger-associated-transport-repeat A6F65_00917 PF00884 Sulfatase A6F65_00918 PF03781 Sulfatase-modifying factor enzyme 1 A6F65_00919 PF00553 Cellulose binding domain A6F65_00919 PF00331 Glycosyl hydrolase family 10 A6F65_00922 PF00210 Ferritin-like domain A6F65_00923 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A6F65_00925 PF11798 IMS family HHH motif A6F65_00925 PF11799 impB/mucB/samB family C-terminal domain A6F65_00925 PF00817 impB/mucB/samB family A6F65_00927 PF00248 Aldo/keto reductase family A6F65_00928 PF00289 Biotin carboxylase, N-terminal domain A6F65_00928 PF00364 Biotin-requiring enzyme A6F65_00928 PF02785 Biotin carboxylase C-terminal domain A6F65_00928 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6F65_00930 PF03641 Possible lysine decarboxylase A6F65_00931 PF01593 Flavin containing amine oxidoreductase A6F65_00941 PF00005 ABC transporter A6F65_00946 PF03806 AbgT putative transporter family A6F65_00949 PF13667 ThiC-associated domain A6F65_00949 PF01964 Radical SAM ThiC family A6F65_00951 PF01964 Radical SAM ThiC family A6F65_00951 PF13667 ThiC-associated domain A6F65_00953 PF08212 Lipocalin-like domain A6F65_00955 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A6F65_00958 PF02469 Fasciclin domain A6F65_00961 PF00313 'Cold-shock' DNA-binding domain A6F65_00963 PF02469 Fasciclin domain A6F65_00967 PF01161 Phosphatidylethanolamine-binding protein A6F65_00976 PF14602 Hexapeptide repeat of succinyl-transferase A6F65_00976 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal A6F65_00976 PF00132 Bacterial transferase hexapeptide (six repeats) A6F65_00978 PF00082 Subtilase family A6F65_00979 PF00625 Guanylate kinase A6F65_00982 PF00475 Imidazoleglycerol-phosphate dehydratase A6F65_00983 PF00117 Glutamine amidotransferase class-I A6F65_00984 PF00977 Histidine biosynthesis protein A6F65_00985 PF00977 Histidine biosynthesis protein A6F65_00987 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A6F65_00989 PF01230 HIT domain A6F65_00991 PF01618 MotA/TolQ/ExbB proton channel family A6F65_00992 PF02472 Biopolymer transport protein ExbD/TolR A6F65_00994 PF04052 TolB amino-terminal domain A6F65_00994 PF07676 WD40-like Beta Propeller Repeat A6F65_00995 PF00691 OmpA family A6F65_00997 PF00226 DnaJ domain A6F65_00997 PF00684 DnaJ central domain A6F65_00997 PF01556 DnaJ C terminal domain A6F65_00999 PF01053 Cys/Met metabolism PLP-dependent enzyme A6F65_01000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6F65_01002 PF00939 Sodium:sulfate symporter transmembrane region A6F65_01006 PF00707 Translation initiation factor IF-3, C-terminal domain A6F65_01006 PF05198 Translation initiation factor IF-3, N-terminal domain A6F65_01008 PF01218 Coproporphyrinogen III oxidase A6F65_01009 PF01433 Peptidase family M1 domain A6F65_01011 PF02386 Cation transport protein A6F65_01012 PF02254 TrkA-N domain A6F65_01012 PF02080 TrkA-C domain A6F65_01013 PF13291 ACT domain A6F65_01013 PF04607 Region found in RelA / SpoT proteins A6F65_01013 PF02824 TGS domain A6F65_01019 PF00171 Aldehyde dehydrogenase family A6F65_01020 PF00083 Sugar (and other) transporter A6F65_01024 PF03480 Bacterial extracellular solute-binding protein, family 7 A6F65_01026 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6F65_01027 PF00356 Bacterial regulatory proteins, lacI family A6F65_01030 PF00294 pfkB family carbohydrate kinase A6F65_01032 PF02515 CoA-transferase family III A6F65_01033 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6F65_01033 PF02770 Acyl-CoA dehydrogenase, middle domain A6F65_01033 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6F65_01034 PF00171 Aldehyde dehydrogenase family A6F65_01037 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain A6F65_01037 PF01522 Polysaccharide deacetylase A6F65_01038 PF00378 Enoyl-CoA hydratase/isomerase A6F65_01039 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6F65_01039 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A6F65_01041 PF00356 Bacterial regulatory proteins, lacI family A6F65_01042 PF00933 Glycosyl hydrolase family 3 N terminal domain A6F65_01042 PF07691 PA14 domain A6F65_01042 PF14310 Fibronectin type III-like domain A6F65_01042 PF01915 Glycosyl hydrolase family 3 C-terminal domain A6F65_01044 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6F65_01045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6F65_01047 PF13417 Glutathione S-transferase, N-terminal domain A6F65_01048 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A6F65_01048 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A6F65_01049 PF07007 Lysozyme inhibitor LprI A6F65_01051 PF00072 Response regulator receiver domain A6F65_01054 PF01389 OmpA-like transmembrane domain A6F65_01054 PF00691 OmpA family A6F65_01056 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A6F65_01056 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A6F65_01057 PF00814 Glycoprotease family A6F65_01058 PF03900 Porphobilinogen deaminase, C-terminal domain A6F65_01058 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A6F65_01061 PF01494 FAD binding domain A6F65_01062 PF02683 Cytochrome C biogenesis protein transmembrane region A6F65_01062 PF00085 Thioredoxin A6F65_01062 PF11412 Disulphide bond corrector protein DsbC A6F65_01064 PF00271 Helicase conserved C-terminal domain A6F65_01064 PF04851 Type III restriction enzyme, res subunit A6F65_01064 PF12344 Ultra-violet resistance protein B A6F65_01064 PF17757 UvrB interaction domain A6F65_01064 PF02151 UvrB/uvrC motif A6F65_01067 PF12697 Alpha/beta hydrolase family A6F65_01067 PF08241 Methyltransferase domain A6F65_01068 PF14403 Circularly permuted ATP-grasp type 2 A6F65_01072 PF00196 Bacterial regulatory proteins, luxR family A6F65_01072 PF00072 Response regulator receiver domain A6F65_01075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6F65_01075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6F65_01075 PF01842 ACT domain A6F65_01076 PF13393 Histidyl-tRNA synthetase A6F65_01077 PF00072 Response regulator receiver domain A6F65_01079 PF00248 Aldo/keto reductase family A6F65_01080 PF00709 Adenylosuccinate synthetase A6F65_01084 PF17763 Glutaminase/Asparaginase C-terminal domain A6F65_01084 PF00710 Asparaginase, N-terminal A6F65_01086 PF01494 FAD binding domain A6F65_01087 PF00085 Thioredoxin A6F65_01088 PF00206 Lyase A6F65_01088 PF14698 Argininosuccinate lyase C-terminal A6F65_01090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6F65_01090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A6F65_01091 PF10414 Sirohaem synthase dimerisation region A6F65_01091 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6F65_01091 PF14824 Sirohaem biosynthesis protein central A6F65_01095 PF03652 Holliday junction resolvase A6F65_01097 PF01594 AI-2E family transporter A6F65_01098 PF10502 Signal peptidase, peptidase S26 A6F65_01099 PF01648 4'-phosphopantetheinyl transferase superfamily A6F65_01100 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A6F65_01101 PF00156 Phosphoribosyl transferase domain A6F65_01102 PF02790 Cytochrome C oxidase subunit II, transmembrane domain A6F65_01102 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A6F65_01103 PF00115 Cytochrome C and Quinol oxidase polypeptide I A6F65_01104 PF01040 UbiA prenyltransferase family A6F65_01106 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 A6F65_01107 PF00510 Cytochrome c oxidase subunit III A6F65_01109 PF00291 Pyridoxal-phosphate dependent enzyme A6F65_01109 PF14821 Threonine synthase N terminus A6F65_01110 PF17785 PUA-like domain A6F65_01110 PF10672 S-adenosylmethionine-dependent methyltransferase A6F65_01113 PF06463 Molybdenum Cofactor Synthesis C A6F65_01113 PF04055 Radical SAM superfamily A6F65_01117 PF00027 Cyclic nucleotide-binding domain A6F65_01117 PF13545 Crp-like helix-turn-helix domain A6F65_01119 PF00829 Ribosomal prokaryotic L21 protein A6F65_01120 PF01016 Ribosomal L27 protein A6F65_01123 PF00072 Response regulator receiver domain A6F65_01123 PF00196 Bacterial regulatory proteins, luxR family A6F65_01124 PF07730 Histidine kinase A6F65_01128 PF03884 DNA gyrase inhibitor YacG A6F65_01130 PF02545 Maf-like protein A6F65_01131 PF01176 Translation initiation factor 1A / IF-1 A6F65_01134 PF08459 UvrC Helix-hairpin-helix N-terminal A6F65_01134 PF01541 GIY-YIG catalytic domain A6F65_01134 PF02151 UvrB/uvrC motif A6F65_01140 PF03030 Inorganic H+ pyrophosphatase A6F65_01141 PF00487 Fatty acid desaturase A6F65_01143 PF00586 AIR synthase related protein, N-terminal domain A6F65_01143 PF02769 AIR synthase related protein, C-terminal domain A6F65_01145 PF01029 NusB family A6F65_01146 PF00815 Histidinol dehydrogenase A6F65_01147 PF01634 ATP phosphoribosyltransferase A6F65_01149 PF00561 alpha/beta hydrolase fold A6F65_01150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6F65_01150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6F65_01151 PF02678 Pirin A6F65_01151 PF05726 Pirin C-terminal cupin domain A6F65_01154 PF00226 DnaJ domain A6F65_01155 PF07237 Protein of unknown function (DUF1428) A6F65_01156 PF07728 AAA domain (dynein-related subfamily) A6F65_01156 PF12556 Cobaltochelatase CobS subunit N terminal A6F65_01156 PF08406 CbbQ/NirQ/NorQ C-terminal A6F65_01157 PF08448 PAS fold A6F65_01157 PF08447 PAS fold A6F65_01157 PF00990 Diguanylate cyclase, GGDEF domain A6F65_01157 PF00563 EAL domain A6F65_01158 PF00912 Transglycosylase A6F65_01158 PF17092 Penicillin-binding protein OB-like domain A6F65_01158 PF00905 Penicillin binding protein transpeptidase domain A6F65_01159 PF01416 tRNA pseudouridine synthase A6F65_01160 PF00551 Formyl transferase A6F65_01160 PF02911 Formyl transferase, C-terminal domain A6F65_01161 PF02132 RecR protein A6F65_01161 PF13662 Toprim domain A6F65_01162 PF01327 Polypeptide deformylase A6F65_01165 PF02646 RmuC family A6F65_01167 PF08032 RNA 2'-O ribose methyltransferase substrate binding A6F65_01167 PF00588 SpoU rRNA Methylase family A6F65_01168 PF00381 PTS HPr component phosphorylation site A6F65_01169 PF03830 PTS system sorbose subfamily IIB component A6F65_01169 PF03610 PTS system fructose IIA component A6F65_01170 PF03668 P-loop ATPase protein family A6F65_01171 PF02603 HPr Serine kinase N terminus A6F65_01171 PF07475 HPr Serine kinase C-terminal domain A6F65_01172 PF13756 Stimulus-sensing domain A6F65_01172 PF13755 Sensor N-terminal transmembrane domain A6F65_01172 PF00512 His Kinase A (phospho-acceptor) domain A6F65_01172 PF00672 HAMP domain A6F65_01172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01173 PF00072 Response regulator receiver domain A6F65_01173 PF00486 Transcriptional regulatory protein, C terminal A6F65_01174 PF01293 Phosphoenolpyruvate carboxykinase A6F65_01179 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_01185 PF02129 X-Pro dipeptidyl-peptidase (S15 family) A6F65_01186 PF00266 Aminotransferase class-V A6F65_01187 PF00266 Aminotransferase class-V A6F65_01188 PF00111 2Fe-2S iron-sulfur cluster binding domain A6F65_01191 PF01965 DJ-1/PfpI family A6F65_01192 PF00521 DNA gyrase/topoisomerase IV, subunit A A6F65_01192 PF03989 DNA gyrase C-terminal domain, beta-propeller A6F65_01193 PF00512 His Kinase A (phospho-acceptor) domain A6F65_01193 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01193 PF09308 LuxQ, periplasmic A6F65_01193 PF00072 Response regulator receiver domain A6F65_01194 PF01743 Poly A polymerase head domain A6F65_01194 PF12626 Polymerase A arginine-rich C-terminus A6F65_01194 PF12627 Probable RNA and SrmB- binding site of polymerase A A6F65_01195 PF00293 NUDIX domain A6F65_01198 PF07995 Glucose / Sorbosone dehydrogenase A6F65_01199 PF01351 Ribonuclease HII A6F65_01200 PF06965 Na+/H+ antiporter 1 A6F65_01201 PF01699 Sodium/calcium exchanger protein A6F65_01202 PF18755 Restriction Enzyme Adenine Methylase Associated A6F65_01202 PF01555 DNA methylase A6F65_01203 PF00809 Pterin binding enzyme A6F65_01205 PF00072 Response regulator receiver domain A6F65_01205 PF02954 Bacterial regulatory protein, Fis family A6F65_01205 PF00158 Sigma-54 interaction domain A6F65_01207 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A6F65_01207 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A6F65_01209 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch A6F65_01210 PF02233 NAD(P) transhydrogenase beta subunit A6F65_01213 PF01966 HD domain A6F65_01213 PF13286 Phosphohydrolase-associated domain A6F65_01217 PF00437 Type II/IV secretion system protein A6F65_01218 PF00892 EamA-like transporter family A6F65_01223 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A6F65_01225 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6F65_01225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6F65_01226 PF00231 ATP synthase A6F65_01228 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6F65_01228 PF00306 ATP synthase alpha/beta chain, C terminal domain A6F65_01228 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6F65_01229 PF00213 ATP synthase delta (OSCP) subunit A6F65_01233 PF02674 Colicin V production protein A6F65_01234 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A6F65_01234 PF12833 Helix-turn-helix domain A6F65_01234 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A6F65_01234 PF02805 Metal binding domain of Ada A6F65_01236 PF02463 RecF/RecN/SMC N terminal domain A6F65_01238 PF06965 Na+/H+ antiporter 1 A6F65_01238 PF13462 Thioredoxin A6F65_01240 PF10576 Iron-sulfur binding domain of endonuclease III A6F65_01240 PF00633 Helix-hairpin-helix motif A6F65_01240 PF00730 HhH-GPD superfamily base excision DNA repair protein A6F65_01240 PF14815 NUDIX domain A6F65_01242 PF00144 Beta-lactamase A6F65_01245 PF00563 EAL domain A6F65_01245 PF00990 Diguanylate cyclase, GGDEF domain A6F65_01245 PF03707 Bacterial signalling protein N terminal repeat A6F65_01247 PF03448 MgtE intracellular N domain A6F65_01247 PF01769 Divalent cation transporter A6F65_01247 PF00571 CBS domain A6F65_01248 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6F65_01251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6F65_01251 PF03466 LysR substrate binding domain A6F65_01252 PF03471 Transporter associated domain A6F65_01252 PF00571 CBS domain A6F65_01253 PF02130 Uncharacterized protein family UPF0054 A6F65_01255 PF02562 PhoH-like protein A6F65_01256 PF01938 TRAM domain A6F65_01256 PF04055 Radical SAM superfamily A6F65_01256 PF00919 Uncharacterized protein family UPF0004 A6F65_01259 PF01475 Ferric uptake regulator family A6F65_01260 PF05443 ROS/MUCR transcriptional regulator protein A6F65_01262 PF00814 Glycoprotease family A6F65_01263 PF00881 Nitroreductase family A6F65_01264 PF01106 NifU-like domain A6F65_01265 PF05193 Peptidase M16 inactive domain A6F65_01265 PF00675 Insulinase (Peptidase family M16) A6F65_01266 PF01474 Class-II DAHP synthetase family A6F65_01267 PF03781 Sulfatase-modifying factor enzyme 1 A6F65_01267 PF12867 DinB superfamily A6F65_01268 PF10017 Histidine-specific methyltransferase, SAM-dependent A6F65_01271 PF00501 AMP-binding enzyme A6F65_01271 PF13193 AMP-binding enzyme C-terminal domain A6F65_01271 PF16177 Acetyl-coenzyme A synthetase N-terminus A6F65_01272 PF02798 Glutathione S-transferase, N-terminal domain A6F65_01278 PF01063 Amino-transferase class IV A6F65_01280 PF01479 S4 domain A6F65_01280 PF01728 FtsJ-like methyltransferase A6F65_01283 PF02565 Recombination protein O C terminal A6F65_01283 PF11967 Recombination protein O N terminal A6F65_01284 PF00180 Isocitrate/isopropylmalate dehydrogenase A6F65_01287 PF01053 Cys/Met metabolism PLP-dependent enzyme A6F65_01291 PF04379 ApaG domain A6F65_01297 PF03466 LysR substrate binding domain A6F65_01297 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6F65_01302 PF00164 Ribosomal protein S12/S23 A6F65_01304 PF00177 Ribosomal protein S7p/S5e A6F65_01305 PF00679 Elongation factor G C-terminus A6F65_01305 PF03764 Elongation factor G, domain IV A6F65_01305 PF03144 Elongation factor Tu domain 2 A6F65_01305 PF14492 Elongation Factor G, domain II A6F65_01305 PF00009 Elongation factor Tu GTP binding domain A6F65_01306 PF03143 Elongation factor Tu C-terminal domain A6F65_01306 PF03144 Elongation factor Tu domain 2 A6F65_01306 PF00009 Elongation factor Tu GTP binding domain A6F65_01307 PF00338 Ribosomal protein S10p/S20e A6F65_01308 PF00297 Ribosomal protein L3 A6F65_01309 PF00573 Ribosomal protein L4/L1 family A6F65_01310 PF00276 Ribosomal protein L23 A6F65_01311 PF03947 Ribosomal Proteins L2, C-terminal domain A6F65_01311 PF00181 Ribosomal Proteins L2, RNA binding domain A6F65_01312 PF00203 Ribosomal protein S19 A6F65_01313 PF00237 Ribosomal protein L22p/L17e A6F65_01314 PF07650 KH domain A6F65_01314 PF00189 Ribosomal protein S3, C-terminal domain A6F65_01315 PF00252 Ribosomal protein L16p/L10e A6F65_01316 PF00831 Ribosomal L29 protein A6F65_01317 PF00366 Ribosomal protein S17 A6F65_01318 PF00238 Ribosomal protein L14p/L23e A6F65_01319 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A6F65_01319 PF00467 KOW motif A6F65_01320 PF00673 ribosomal L5P family C-terminus A6F65_01320 PF00281 Ribosomal protein L5 A6F65_01321 PF00253 Ribosomal protein S14p/S29e A6F65_01322 PF00410 Ribosomal protein S8 A6F65_01323 PF00347 Ribosomal protein L6 A6F65_01324 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A6F65_01325 PF00333 Ribosomal protein S5, N-terminal domain A6F65_01325 PF03719 Ribosomal protein S5, C-terminal domain A6F65_01326 PF00327 Ribosomal protein L30p/L7e A6F65_01328 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A6F65_01329 PF00344 SecY translocase A6F65_01330 PF05191 Adenylate kinase, active site lid A6F65_01333 PF00416 Ribosomal protein S13/S18 A6F65_01334 PF00411 Ribosomal protein S11 A6F65_01335 PF01000 RNA polymerase Rpb3/RpoA insert domain A6F65_01335 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A6F65_01335 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A6F65_01336 PF01196 Ribosomal protein L17 A6F65_01337 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A6F65_01337 PF00326 Prolyl oligopeptidase family A6F65_01340 PF03458 UPF0126 domain A6F65_01343 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_01343 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6F65_01345 PF02817 e3 binding domain A6F65_01345 PF00364 Biotin-requiring enzyme A6F65_01345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6F65_01346 PF16870 2-oxoglutarate dehydrogenase C-terminal A6F65_01346 PF00676 Dehydrogenase E1 component A6F65_01346 PF16078 2-oxoglutarate dehydrogenase N-terminus A6F65_01346 PF02779 Transketolase, pyrimidine binding domain A6F65_01347 PF02629 CoA binding domain A6F65_01347 PF00549 CoA-ligase A6F65_01349 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A6F65_01349 PF00056 lactate/malate dehydrogenase, NAD binding domain A6F65_01350 PF00563 EAL domain A6F65_01350 PF00990 Diguanylate cyclase, GGDEF domain A6F65_01350 PF03707 Bacterial signalling protein N terminal repeat A6F65_01350 PF13188 PAS domain A6F65_01353 PF00593 TonB dependent receptor A6F65_01353 PF07715 TonB-dependent Receptor Plug Domain A6F65_01355 PF01032 FecCD transport family A6F65_01356 PF00005 ABC transporter A6F65_01361 PF02834 LigT like Phosphoesterase A6F65_01364 PF17760 UvrA interaction domain A6F65_01364 PF17755 UvrA DNA-binding domain A6F65_01369 PF03330 Lytic transglycolase A6F65_01370 PF00764 Arginosuccinate synthase A6F65_01372 PF00174 Oxidoreductase molybdopterin binding domain A6F65_01373 PF01292 Prokaryotic cytochrome b561 A6F65_01375 PF03109 ABC1 family A6F65_01377 PF00795 Carbon-nitrogen hydrolase A6F65_01377 PF02540 NAD synthase A6F65_01379 PF04055 Radical SAM superfamily A6F65_01382 PF01145 SPFH domain / Band 7 family A6F65_01382 PF15975 Flotillin A6F65_01383 PF01272 Transcription elongation factor, GreA/GreB, C-term A6F65_01383 PF03449 Transcription elongation factor, N-terminal A6F65_01384 PF01464 Transglycosylase SLT domain A6F65_01384 PF14718 Soluble lytic murein transglycosylase L domain A6F65_01385 PF00701 Dihydrodipicolinate synthetase family A6F65_01387 PF01668 SmpB protein A6F65_01389 PF13188 PAS domain A6F65_01389 PF00072 Response regulator receiver domain A6F65_01389 PF00512 His Kinase A (phospho-acceptor) domain A6F65_01389 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01389 PF08448 PAS fold A6F65_01392 PF00154 recA bacterial DNA recombination protein A6F65_01394 PF02272 DHHA1 domain A6F65_01394 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6F65_01394 PF01411 tRNA synthetases class II (A) A6F65_01396 PF00999 Sodium/hydrogen exchanger family A6F65_01396 PF02254 TrkA-N domain A6F65_01397 PF00474 Sodium:solute symporter family A6F65_01398 PF00583 Acetyltransferase (GNAT) family A6F65_01398 PF00795 Carbon-nitrogen hydrolase A6F65_01399 PF00180 Isocitrate/isopropylmalate dehydrogenase A6F65_01400 PF01494 FAD binding domain A6F65_01402 PF02797 Chalcone and stilbene synthases, C-terminal domain A6F65_01402 PF00195 Chalcone and stilbene synthases, N-terminal domain A6F65_01404 PF02770 Acyl-CoA dehydrogenase, middle domain A6F65_01404 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6F65_01404 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6F65_01404 PF12806 Acetyl-CoA dehydrogenase C-terminal like A6F65_01405 PF00378 Enoyl-CoA hydratase/isomerase A6F65_01405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A6F65_01405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A6F65_01406 PF02803 Thiolase, C-terminal domain A6F65_01406 PF00108 Thiolase, N-terminal domain A6F65_01407 PF00501 AMP-binding enzyme A6F65_01407 PF13193 AMP-binding enzyme C-terminal domain A6F65_01408 PF13411 MerR HTH family regulatory protein A6F65_01410 PF00072 Response regulator receiver domain A6F65_01413 PF01565 FAD binding domain A6F65_01413 PF02913 FAD linked oxidases, C-terminal domain A6F65_01415 PF00270 DEAD/DEAH box helicase A6F65_01415 PF00271 Helicase conserved C-terminal domain A6F65_01417 PF13361 UvrD-like helicase C-terminal domain A6F65_01417 PF00580 UvrD/REP helicase N-terminal domain A6F65_01423 PF00849 RNA pseudouridylate synthase A6F65_01423 PF01479 S4 domain A6F65_01424 PF07690 Major Facilitator Superfamily A6F65_01425 PF02875 Mur ligase family, glutamate ligase domain A6F65_01425 PF08245 Mur ligase middle domain A6F65_01426 PF17848 Acetyl-coA carboxylase zinc finger domain A6F65_01426 PF01039 Carboxyl transferase domain A6F65_01427 PF00290 Tryptophan synthase alpha chain A6F65_01428 PF04480 Protein of unknown function (DUF559) A6F65_01429 PF00291 Pyridoxal-phosphate dependent enzyme A6F65_01430 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A6F65_01432 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A6F65_01434 PF10397 Adenylosuccinate lyase C-terminus A6F65_01434 PF00206 Lyase A6F65_01435 PF04002 RadC-like JAB domain A6F65_01440 PF00119 ATP synthase A chain A6F65_01441 PF00137 ATP synthase subunit C A6F65_01442 PF00430 ATP synthase B/B' CF(0) A6F65_01443 PF00430 ATP synthase B/B' CF(0) A6F65_01445 PF16123 Hydroxyacylglutathione hydrolase C-terminus A6F65_01445 PF00753 Metallo-beta-lactamase superfamily A6F65_01446 PF00575 S1 RNA binding domain A6F65_01448 PF02224 Cytidylate kinase A6F65_01450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A6F65_01453 PF02978 Signal peptide binding domain A6F65_01453 PF00448 SRP54-type protein, GTPase domain A6F65_01453 PF02881 SRP54-type protein, helical bundle domain A6F65_01454 PF00886 Ribosomal protein S16 A6F65_01455 PF05239 PRC-barrel domain A6F65_01455 PF01782 RimM N-terminal domain A6F65_01457 PF00795 Carbon-nitrogen hydrolase A6F65_01459 PF01746 tRNA (Guanine-1)-methyltransferase A6F65_01460 PF01245 Ribosomal protein L19 A6F65_01462 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region A6F65_01462 PF00326 Prolyl oligopeptidase family A6F65_01464 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6F65_01464 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6F65_01467 PF00561 alpha/beta hydrolase fold A6F65_01470 PF18030 RimK PreATP-grasp domain A6F65_01470 PF08443 RimK-like ATP-grasp domain A6F65_01471 PF08443 RimK-like ATP-grasp domain A6F65_01471 PF18030 RimK PreATP-grasp domain A6F65_01473 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus A6F65_01473 PF01048 Phosphorylase superfamily A6F65_01474 PF01281 Ribosomal protein L9, N-terminal domain A6F65_01474 PF03948 Ribosomal protein L9, C-terminal domain A6F65_01475 PF01084 Ribosomal protein S18 A6F65_01476 PF01250 Ribosomal protein S6 A6F65_01477 PF05661 Protein of unknown function (DUF808) A6F65_01479 PF08245 Mur ligase middle domain A6F65_01479 PF02875 Mur ligase family, glutamate ligase domain A6F65_01479 PF01225 Mur ligase family, catalytic domain A6F65_01480 PF17676 LD-carboxypeptidase C-terminal domain A6F65_01480 PF02016 LD-carboxypeptidase N-terminal domain A6F65_01481 PF00698 Acyl transferase domain A6F65_01485 PF00712 DNA polymerase III beta subunit, N-terminal domain A6F65_01485 PF02768 DNA polymerase III beta subunit, C-terminal domain A6F65_01485 PF02767 DNA polymerase III beta subunit, central domain A6F65_01487 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_01488 PF00990 Diguanylate cyclase, GGDEF domain A6F65_01488 PF00563 EAL domain A6F65_01488 PF03707 Bacterial signalling protein N terminal repeat A6F65_01488 PF13188 PAS domain A6F65_01489 PF00563 EAL domain A6F65_01489 PF13188 PAS domain A6F65_01489 PF00990 Diguanylate cyclase, GGDEF domain A6F65_01489 PF03707 Bacterial signalling protein N terminal repeat A6F65_01490 PF06421 GTP-binding protein LepA C-terminus A6F65_01490 PF00679 Elongation factor G C-terminus A6F65_01490 PF00009 Elongation factor Tu GTP binding domain A6F65_01495 PF13525 Outer membrane lipoprotein A6F65_01497 PF02463 RecF/RecN/SMC N terminal domain A6F65_01497 PF13476 AAA domain A6F65_01499 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A6F65_01499 PF01653 NAD-dependent DNA ligase adenylation domain A6F65_01499 PF12826 Helix-hairpin-helix motif A6F65_01499 PF00533 BRCA1 C Terminus (BRCT) domain A6F65_01499 PF03120 NAD-dependent DNA ligase OB-fold domain A6F65_01501 PF00106 short chain dehydrogenase A6F65_01506 PF00753 Metallo-beta-lactamase superfamily A6F65_01508 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6F65_01509 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6F65_01510 PF00890 FAD binding domain A6F65_01510 PF02910 Fumarate reductase flavoprotein C-term A6F65_01513 PF04542 Sigma-70 region 2 A6F65_01513 PF04545 Sigma-70, region 4 A6F65_01516 PF04228 Putative neutral zinc metallopeptidase A6F65_01519 PF00478 IMP dehydrogenase / GMP reductase domain A6F65_01519 PF00571 CBS domain A6F65_01521 PF01189 16S rRNA methyltransferase RsmB/F A6F65_01521 PF01029 NusB family A6F65_01523 PF00293 NUDIX domain A6F65_01524 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A6F65_01524 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A6F65_01524 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A6F65_01525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6F65_01527 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6F65_01529 PF00875 DNA photolyase A6F65_01529 PF03441 FAD binding domain of DNA photolyase A6F65_01531 PF00144 Beta-lactamase A6F65_01532 PF00144 Beta-lactamase A6F65_01534 PF00106 short chain dehydrogenase A6F65_01535 PF00156 Phosphoribosyl transferase domain A6F65_01535 PF13537 Glutamine amidotransferase domain A6F65_01537 PF00303 Thymidylate synthase A6F65_01538 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal A6F65_01538 PF00676 Dehydrogenase E1 component A6F65_01539 PF02780 Transketolase, C-terminal domain A6F65_01539 PF02779 Transketolase, pyrimidine binding domain A6F65_01540 PF02817 e3 binding domain A6F65_01540 PF00364 Biotin-requiring enzyme A6F65_01540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6F65_01544 PF01812 5-formyltetrahydrofolate cyclo-ligase family A6F65_01547 PF02779 Transketolase, pyrimidine binding domain A6F65_01547 PF02780 Transketolase, C-terminal domain A6F65_01547 PF00456 Transketolase, thiamine diphosphate binding domain A6F65_01548 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6F65_01548 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6F65_01549 PF00162 Phosphoglycerate kinase A6F65_01550 PF03358 NADPH-dependent FMN reductase A6F65_01550 PF01566 Natural resistance-associated macrophage protein A6F65_01551 PF00274 Fructose-bisphosphate aldolase class-I A6F65_01553 PF02581 Thiamine monophosphate synthase A6F65_01554 PF01476 LysM domain A6F65_01554 PF03734 L,D-transpeptidase catalytic domain A6F65_01555 PF01464 Transglycosylase SLT domain A6F65_01555 PF10145 Phage-related minor tail protein A6F65_01555 PF01551 Peptidase family M23 A6F65_01557 PF09285 Elongation factor P, C-terminal A6F65_01557 PF08207 Elongation factor P (EF-P) KOW-like domain A6F65_01557 PF01132 Elongation factor P (EF-P) OB domain A6F65_01558 PF00459 Inositol monophosphatase family A6F65_01563 PF02397 Bacterial sugar transferase A6F65_01564 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01564 PF00512 His Kinase A (phospho-acceptor) domain A6F65_01565 PF00072 Response regulator receiver domain A6F65_01565 PF00158 Sigma-54 interaction domain A6F65_01565 PF02954 Bacterial regulatory protein, Fis family A6F65_01567 PF13593 SBF-like CPA transporter family (DUF4137) A6F65_01569 PF02548 Ketopantoate hydroxymethyltransferase A6F65_01570 PF00209 Sodium:neurotransmitter symporter family A6F65_01572 PF00194 Eukaryotic-type carbonic anhydrase A6F65_01574 PF03167 Uracil DNA glycosylase superfamily A6F65_01575 PF01810 LysE type translocator A6F65_01577 PF00072 Response regulator receiver domain A6F65_01577 PF00486 Transcriptional regulatory protein, C terminal A6F65_01578 PF01895 PhoU domain A6F65_01579 PF00005 ABC transporter A6F65_01580 PF00528 Binding-protein-dependent transport system inner membrane component A6F65_01581 PF00528 Binding-protein-dependent transport system inner membrane component A6F65_01583 PF07396 Phosphate-selective porin O and P A6F65_01584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01584 PF16736 Single Cache-like A6F65_01584 PF00989 PAS fold A6F65_01584 PF00512 His Kinase A (phospho-acceptor) domain A6F65_01586 PF17768 RecJ OB domain A6F65_01586 PF02272 DHHA1 domain A6F65_01586 PF01368 DHH family A6F65_01590 PF00682 HMGL-like A6F65_01590 PF08502 LeuA allosteric (dimerisation) domain A6F65_01591 PF04264 YceI-like domain A6F65_01593 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A6F65_01593 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A6F65_01595 PF10369 Small subunit of acetolactate synthase A6F65_01596 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6F65_01596 PF00205 Thiamine pyrophosphate enzyme, central domain A6F65_01596 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6F65_01601 PF00586 AIR synthase related protein, N-terminal domain A6F65_01601 PF02769 AIR synthase related protein, C-terminal domain A6F65_01601 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A6F65_01602 PF02609 Exonuclease VII small subunit A6F65_01603 PF00348 Polyprenyl synthetase A6F65_01604 PF01467 Cytidylyltransferase-like A6F65_01605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6F65_01606 PF02547 Queuosine biosynthesis protein A6F65_01608 PF00005 ABC transporter A6F65_01609 PF01061 ABC-2 type transporter A6F65_01611 PF01702 Queuine tRNA-ribosyltransferase A6F65_01613 PF00163 Ribosomal protein S4/S9 N-terminal domain A6F65_01613 PF01479 S4 domain A6F65_01617 PF00588 SpoU rRNA Methylase family A6F65_01618 PF03477 ATP cone domain A6F65_01619 PF00464 Serine hydroxymethyltransferase A6F65_01620 PF02502 Ribose/Galactose Isomerase A6F65_01621 PF04545 Sigma-70, region 4 A6F65_01621 PF04539 Sigma-70 region 3 A6F65_01621 PF04542 Sigma-70 region 2 A6F65_01621 PF00140 Sigma-70 factor, region 1.2 A6F65_01621 PF04546 Sigma-70, non-essential region A6F65_01621 PF03979 Sigma-70 factor, region 1.1 A6F65_01622 PF13662 Toprim domain A6F65_01622 PF01807 CHC2 zinc finger A6F65_01622 PF08275 DNA primase catalytic core, N-terminal domain A6F65_01625 PF00117 Glutamine amidotransferase class-I A6F65_01625 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A6F65_01626 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A6F65_01626 PF02142 MGS-like domain A6F65_01626 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6F65_01627 PF03449 Transcription elongation factor, N-terminal A6F65_01627 PF01272 Transcription elongation factor, GreA/GreB, C-term A6F65_01633 PF03952 Enolase, N-terminal domain A6F65_01633 PF00113 Enolase, C-terminal TIM barrel domain A6F65_01634 PF00885 6,7-dimethyl-8-ribityllumazine synthase A6F65_01635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A6F65_01635 PF00925 GTP cyclohydrolase II A6F65_01636 PF01613 Flavin reductase like domain A6F65_01640 PF01098 Cell cycle protein A6F65_01641 PF00905 Penicillin binding protein transpeptidase domain A6F65_01641 PF03717 Penicillin-binding Protein dimerisation domain A6F65_01643 PF04085 rod shape-determining protein MreC A6F65_01645 PF01119 DNA mismatch repair protein, C-terminal domain A6F65_01645 PF08676 MutL C terminal dimerisation domain A6F65_01651 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A6F65_01651 PF04055 Radical SAM superfamily A6F65_01652 PF03364 Polyketide cyclase / dehydrase and lipid transport A6F65_01653 PF02464 Competence-damaged protein A6F65_01655 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A6F65_01655 PF02542 YgbB family A6F65_01656 PF01207 Dihydrouridine synthase (Dus) A6F65_01657 PF00512 His Kinase A (phospho-acceptor) domain A6F65_01657 PF00989 PAS fold A6F65_01657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01658 PF02954 Bacterial regulatory protein, Fis family A6F65_01658 PF00072 Response regulator receiver domain A6F65_01658 PF00158 Sigma-54 interaction domain A6F65_01659 PF00989 PAS fold A6F65_01659 PF00512 His Kinase A (phospho-acceptor) domain A6F65_01659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01659 PF00672 HAMP domain A6F65_01660 PF00158 Sigma-54 interaction domain A6F65_01660 PF00072 Response regulator receiver domain A6F65_01660 PF02954 Bacterial regulatory protein, Fis family A6F65_01661 PF17209 Hfq protein A6F65_01662 PF16360 GTP-binding GTPase Middle Region A6F65_01662 PF01926 50S ribosome-binding GTPase A6F65_01662 PF13167 GTP-binding GTPase N-terminal A6F65_01663 PF03819 MazG nucleotide pyrophosphohydrolase domain A6F65_01664 PF01546 Peptidase family M20/M25/M40 A6F65_01664 PF07687 Peptidase dimerisation domain A6F65_01666 PF12706 Beta-lactamase superfamily domain A6F65_01666 PF00753 Metallo-beta-lactamase superfamily A6F65_01667 PF01026 TatD related DNase A6F65_01668 PF08264 Anticodon-binding domain of tRNA A6F65_01668 PF09334 tRNA synthetases class I (M) A6F65_01669 PF09115 DNA polymerase III, delta subunit, C terminal A6F65_01670 PF02223 Thymidylate kinase A6F65_01672 PF03330 Lytic transglycolase A6F65_01672 PF05036 Sporulation related domain A6F65_01673 PF13406 Transglycosylase SLT domain A6F65_01676 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6F65_01676 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6F65_01678 PF03061 Thioesterase superfamily A6F65_01679 PF00364 Biotin-requiring enzyme A6F65_01679 PF02817 e3 binding domain A6F65_01679 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6F65_01682 PF00773 RNB domain A6F65_01682 PF00575 S1 RNA binding domain A6F65_01682 PF17876 Cold shock domain A6F65_01682 PF08206 Ribonuclease B OB domain A6F65_01682 PF08461 Ribonuclease R winged-helix domain A6F65_01683 PF03129 Anticodon binding domain A6F65_01683 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6F65_01684 PF07879 PHB/PHA accumulation regulator DNA-binding domain A6F65_01684 PF05233 PHB accumulation regulatory domain A6F65_01685 PF01168 Alanine racemase, N-terminal domain A6F65_01685 PF00842 Alanine racemase, C-terminal domain A6F65_01686 PF08946 Osmosensory transporter coiled coil A6F65_01686 PF00083 Sugar (and other) transporter A6F65_01688 PF02674 Colicin V production protein A6F65_01689 PF18073 Rubredoxin metal binding domain A6F65_01689 PF06745 KaiC A6F65_01690 PF01734 Patatin-like phospholipase A6F65_01690 PF11856 Protein of unknown function (DUF3376) A6F65_01691 PF01556 DnaJ C terminal domain A6F65_01691 PF00684 DnaJ central domain A6F65_01691 PF00226 DnaJ domain A6F65_01692 PF00012 Hsp70 protein A6F65_01697 PF01025 GrpE A6F65_01698 PF01628 HrcA protein C terminal domain A6F65_01699 PF03725 3' exoribonuclease family, domain 2 A6F65_01699 PF01138 3' exoribonuclease family, domain 1 A6F65_01700 PF01725 Ham1 family A6F65_01702 PF06969 HemN C-terminal domain A6F65_01702 PF04055 Radical SAM superfamily A6F65_01703 PF00589 Phage integrase family A6F65_01703 PF02899 Phage integrase, N-terminal SAM-like domain A6F65_01704 PF09335 SNARE associated Golgi protein A6F65_01705 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A6F65_01705 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A6F65_01706 PF02021 Uncharacterised protein family UPF0102 A6F65_01707 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6F65_01708 PF04348 LppC putative lipoprotein A6F65_01709 PF01751 Toprim domain A6F65_01709 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01709 PF00986 DNA gyrase B subunit, carboxyl terminus A6F65_01709 PF00204 DNA gyrase B A6F65_01715 PF07075 Protein of unknown function (DUF1343) A6F65_01717 PF01479 S4 domain A6F65_01717 PF00579 tRNA synthetases class I (W and Y) A6F65_01720 PF00291 Pyridoxal-phosphate dependent enzyme A6F65_01721 PF01502 Phosphoribosyl-AMP cyclohydrolase A6F65_01724 PF02896 PEP-utilising enzyme, TIM barrel domain A6F65_01724 PF00391 PEP-utilising enzyme, mobile domain A6F65_01724 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A6F65_01725 PF02092 Glycyl-tRNA synthetase beta subunit A6F65_01725 PF05746 DALR anticodon binding domain A6F65_01726 PF02091 Glycyl-tRNA synthetase alpha subunit A6F65_01728 PF06114 IrrE N-terminal-like domain A6F65_01728 PF01381 Helix-turn-helix A6F65_01728 PF09856 Predicted transcriptional regulator (DUF2083) A6F65_01732 PF01386 Ribosomal L25p family A6F65_01732 PF14693 Ribosomal protein TL5, C-terminal domain A6F65_01733 PF01195 Peptidyl-tRNA hydrolase A6F65_01734 PF01926 50S ribosome-binding GTPase A6F65_01734 PF06071 Protein of unknown function (DUF933) A6F65_01736 PF03989 DNA gyrase C-terminal domain, beta-propeller A6F65_01736 PF00521 DNA gyrase/topoisomerase IV, subunit A A6F65_01740 PF01134 Glucose inhibited division protein A A6F65_01749 PF02780 Transketolase, C-terminal domain A6F65_01749 PF00364 Biotin-requiring enzyme A6F65_01749 PF02779 Transketolase, pyrimidine binding domain A6F65_01750 PF00676 Dehydrogenase E1 component A6F65_01753 PF03918 Cytochrome C biogenesis protein A6F65_01754 PF08534 Redoxin A6F65_01755 PF01578 Cytochrome C assembly protein A6F65_01755 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A6F65_01756 PF03100 CcmE A6F65_01758 PF01578 Cytochrome C assembly protein A6F65_01762 PF00795 Carbon-nitrogen hydrolase A6F65_01763 PF00462 Glutaredoxin A6F65_01764 PF00011 Hsp20/alpha crystallin family A6F65_01765 PF00117 Glutamine amidotransferase class-I A6F65_01765 PF06418 CTP synthase N-terminus A6F65_01767 PF00121 Triosephosphate isomerase A6F65_01769 PF00425 chorismate binding enzyme A6F65_01769 PF04715 Anthranilate synthase component I, N terminal region A6F65_01771 PF00561 alpha/beta hydrolase fold A6F65_01773 PF00117 Glutamine amidotransferase class-I A6F65_01774 PF00591 Glycosyl transferase family, a/b domain A6F65_01774 PF02885 Glycosyl transferase family, helical bundle domain A6F65_01775 PF00218 Indole-3-glycerol phosphate synthase A6F65_01776 PF01588 Putative tRNA binding domain A6F65_01777 PF01967 MoaC family A6F65_01778 PF00994 Probable molybdopterin binding domain A6F65_01778 PF03454 MoeA C-terminal region (domain IV) A6F65_01778 PF03453 MoeA N-terminal region (domain I and II) A6F65_01779 PF01726 LexA DNA binding domain A6F65_01779 PF00717 Peptidase S24-like A6F65_01780 PF00753 Metallo-beta-lactamase superfamily A6F65_01780 PF03772 Competence protein A6F65_01781 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6F65_01782 PF00285 Citrate synthase, C-terminal domain A6F65_01784 PF00512 His Kinase A (phospho-acceptor) domain A6F65_01784 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01790 PF12706 Beta-lactamase superfamily domain A6F65_01790 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A6F65_01790 PF17770 Ribonuclease J C-terminal domain A6F65_01791 PF03309 Type III pantothenate kinase A6F65_01792 PF02237 Biotin protein ligase C terminal domain A6F65_01792 PF03099 Biotin/lipoate A/B protein ligase family A6F65_01793 PF00361 Proton-conducting membrane transporter A6F65_01794 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus A6F65_01794 PF00361 Proton-conducting membrane transporter A6F65_01795 PF00361 Proton-conducting membrane transporter A6F65_01795 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A6F65_01796 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A6F65_01797 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A6F65_01798 PF12838 4Fe-4S dicluster domain A6F65_01799 PF00146 NADH dehydrogenase A6F65_01801 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal A6F65_01801 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A6F65_01801 PF00384 Molybdopterin oxidoreductase A6F65_01806 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A6F65_01806 PF10531 SLBB domain A6F65_01806 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A6F65_01810 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A6F65_01812 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A6F65_01813 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A6F65_01814 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A6F65_01815 PF00171 Aldehyde dehydrogenase family A6F65_01816 PF00108 Thiolase, N-terminal domain A6F65_01816 PF02803 Thiolase, C-terminal domain A6F65_01819 PF00909 Ammonium Transporter Family A6F65_01821 PF01728 FtsJ-like methyltransferase A6F65_01822 PF00472 RF-1 domain A6F65_01822 PF03462 PCRF domain A6F65_01823 PF00578 AhpC/TSA family A6F65_01824 PF17092 Penicillin-binding protein OB-like domain A6F65_01824 PF00905 Penicillin binding protein transpeptidase domain A6F65_01824 PF00912 Transglycosylase A6F65_01825 PF11741 AMIN domain A6F65_01825 PF01520 N-acetylmuramoyl-L-alanine amidase A6F65_01826 PF12111 Polyribonucleotide phosphorylase C terminal A6F65_01826 PF00575 S1 RNA binding domain A6F65_01826 PF10150 Ribonuclease E/G family A6F65_01830 PF00535 Glycosyl transferase family 2 A6F65_01832 PF13085 2Fe-2S iron-sulfur cluster binding domain A6F65_01833 PF03969 AFG1-like ATPase A6F65_01834 PF02678 Pirin A6F65_01834 PF17954 Quercetinase C-terminal cupin domain A6F65_01836 PF00733 Asparagine synthase A6F65_01836 PF13537 Glutamine amidotransferase domain A6F65_01841 PF01471 Putative peptidoglycan binding domain A6F65_01841 PF13401 AAA domain A6F65_01846 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A6F65_01846 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6F65_01847 PF13193 AMP-binding enzyme C-terminal domain A6F65_01847 PF00501 AMP-binding enzyme A6F65_01852 PF05958 tRNA (Uracil-5-)-methyltransferase A6F65_01854 PF00920 Dehydratase family A6F65_01856 PF08544 GHMP kinases C terminal A6F65_01860 PF00994 Probable molybdopterin binding domain A6F65_01861 PF01699 Sodium/calcium exchanger protein A6F65_01863 PF00501 AMP-binding enzyme A6F65_01863 PF13193 AMP-binding enzyme C-terminal domain A6F65_01864 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6F65_01864 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6F65_01864 PF14579 Helix-hairpin-helix motif A6F65_01864 PF02811 PHP domain A6F65_01866 PF00005 ABC transporter A6F65_01867 PF02687 FtsX-like permease family A6F65_01867 PF12704 MacB-like periplasmic core domain A6F65_01868 PF00990 Diguanylate cyclase, GGDEF domain A6F65_01869 PF00271 Helicase conserved C-terminal domain A6F65_01869 PF17191 RecG wedge domain A6F65_01869 PF00270 DEAD/DEAH box helicase A6F65_01871 PF17757 UvrB interaction domain A6F65_01871 PF03461 TRCF domain A6F65_01871 PF00271 Helicase conserved C-terminal domain A6F65_01871 PF00270 DEAD/DEAH box helicase A6F65_01871 PF02559 CarD-like/TRCF domain A6F65_01872 PF00563 EAL domain A6F65_01872 PF00990 Diguanylate cyclase, GGDEF domain A6F65_01872 PF03707 Bacterial signalling protein N terminal repeat A6F65_01873 PF01513 ATP-NAD kinase A6F65_01875 PF02810 SEC-C motif A6F65_01875 PF07517 SecA DEAD-like domain A6F65_01875 PF01043 SecA preprotein cross-linking domain A6F65_01875 PF07516 SecA Wing and Scaffold domain A6F65_01880 PF01960 ArgJ family A6F65_01881 PF00459 Inositol monophosphatase family A6F65_01882 PF00085 Thioredoxin A6F65_01883 PF13361 UvrD-like helicase C-terminal domain A6F65_01883 PF12705 PD-(D/E)XK nuclease superfamily A6F65_01883 PF00580 UvrD/REP helicase N-terminal domain A6F65_01884 PF12705 PD-(D/E)XK nuclease superfamily A6F65_01885 PF12804 MobA-like NTP transferase domain A6F65_01886 PF01636 Phosphotransferase enzyme family A6F65_01887 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A6F65_01888 PF00512 His Kinase A (phospho-acceptor) domain A6F65_01888 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01889 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A6F65_01889 PF05221 S-adenosyl-L-homocysteine hydrolase A6F65_01890 PF08534 Redoxin A6F65_01893 PF00440 Bacterial regulatory proteins, tetR family A6F65_01893 PF17932 Tetracyclin repressor-like, C-terminal domain A6F65_01894 PF01227 GTP cyclohydrolase I A6F65_01895 PF13091 PLD-like domain A6F65_01895 PF13396 Phospholipase_D-nuclease N-terminal A6F65_01902 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A6F65_01903 PF02899 Phage integrase, N-terminal SAM-like domain A6F65_01903 PF00589 Phage integrase family A6F65_01906 PF01202 Shikimate kinase A6F65_01907 PF01761 3-dehydroquinate synthase A6F65_01910 PF00342 Phosphoglucose isomerase A6F65_01911 PF10502 Signal peptidase, peptidase S26 A6F65_01912 PF14622 Ribonuclease-III-like A6F65_01912 PF00035 Double-stranded RNA binding motif A6F65_01913 PF01926 50S ribosome-binding GTPase A6F65_01913 PF07650 KH domain A6F65_01915 PF01751 Toprim domain A6F65_01915 PF01131 DNA topoisomerase A6F65_01915 PF13368 Topoisomerase C-terminal repeat A6F65_01915 PF01396 Topoisomerase DNA binding C4 zinc finger A6F65_01920 PF17782 DprA winged helix domain A6F65_01920 PF02481 DNA recombination-mediator protein A A6F65_01921 PF02660 Glycerol-3-phosphate acyltransferase A6F65_01922 PF01177 Asp/Glu/Hydantoin racemase A6F65_01923 PF00155 Aminotransferase class I and II A6F65_01924 PF13188 PAS domain A6F65_01924 PF00990 Diguanylate cyclase, GGDEF domain A6F65_01924 PF03707 Bacterial signalling protein N terminal repeat A6F65_01924 PF00563 EAL domain A6F65_01926 PF01916 Deoxyhypusine synthase A6F65_01927 PF00291 Pyridoxal-phosphate dependent enzyme A6F65_01930 PF00072 Response regulator receiver domain A6F65_01931 PF00982 Glycosyltransferase family 20 A6F65_01932 PF00723 Glycosyl hydrolases family 15 A6F65_01933 PF02358 Trehalose-phosphatase A6F65_01937 PF02618 YceG-like family A6F65_01938 PF02801 Beta-ketoacyl synthase, C-terminal domain A6F65_01938 PF00109 Beta-ketoacyl synthase, N-terminal domain A6F65_01939 PF00550 Phosphopantetheine attachment site A6F65_01941 PF02938 GAD domain A6F65_01941 PF01336 OB-fold nucleic acid binding domain A6F65_01941 PF00152 tRNA synthetases class II (D, K and N) A6F65_01943 PF00570 HRDC domain A6F65_01943 PF01612 3'-5' exonuclease A6F65_01944 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6F65_01944 PF03466 LysR substrate binding domain A6F65_01946 PF01066 CDP-alcohol phosphatidyltransferase A6F65_01947 PF07690 Major Facilitator Superfamily A6F65_01949 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6F65_01949 PF00205 Thiamine pyrophosphate enzyme, central domain A6F65_01949 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6F65_01951 PF00563 EAL domain A6F65_01951 PF03707 Bacterial signalling protein N terminal repeat A6F65_01951 PF13188 PAS domain A6F65_01951 PF00990 Diguanylate cyclase, GGDEF domain A6F65_01952 PF01678 Diaminopimelate epimerase A6F65_01953 PF00919 Uncharacterized protein family UPF0004 A6F65_01953 PF04055 Radical SAM superfamily A6F65_01954 PF00448 SRP54-type protein, GTPase domain A6F65_01954 PF02881 SRP54-type protein, helical bundle domain A6F65_01955 PF04279 Intracellular septation protein A A6F65_01956 PF02705 K+ potassium transporter A6F65_01957 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A6F65_01957 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A6F65_01961 PF01197 Ribosomal protein L31 A6F65_01962 PF07977 FabA-like domain A6F65_01965 PF02163 Peptidase family M50 A6F65_01965 PF17820 PDZ domain A6F65_01966 PF13288 DXP reductoisomerase C-terminal domain A6F65_01966 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A6F65_01966 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A6F65_01968 PF01255 Putative undecaprenyl diphosphate synthase A6F65_01969 PF01765 Ribosome recycling factor A6F65_01970 PF00696 Amino acid kinase family A6F65_01973 PF00889 Elongation factor TS A6F65_01974 PF00318 Ribosomal protein S2 A6F65_01975 PF01066 CDP-alcohol phosphatidyltransferase A6F65_01976 PF02666 Phosphatidylserine decarboxylase A6F65_01978 PF08032 RNA 2'-O ribose methyltransferase substrate binding A6F65_01978 PF00588 SpoU rRNA Methylase family A6F65_01980 PF00216 Bacterial DNA-binding protein A6F65_01981 PF00004 ATPase family associated with various cellular activities (AAA) A6F65_01981 PF05362 Lon protease (S16) C-terminal proteolytic domain A6F65_01981 PF02190 ATP-dependent protease La (LON) substrate-binding domain A6F65_01983 PF02575 YbaB/EbfC DNA-binding family A6F65_01984 PF12169 DNA polymerase III subunits gamma and tau domain III A6F65_01984 PF12170 DNA polymerase III tau subunit V interacting with alpha A6F65_01984 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A6F65_01986 PF04408 Helicase associated domain (HA2) A6F65_01986 PF00271 Helicase conserved C-terminal domain A6F65_01986 PF00270 DEAD/DEAH box helicase A6F65_01986 PF08482 ATP-dependent helicase C-terminal A6F65_01987 PF00348 Polyprenyl synthetase A6F65_01988 PF02153 Prephenate dehydrogenase A6F65_01988 PF01817 Chorismate mutase type II A6F65_01989 PF13581 Histidine kinase-like ATPase domain A6F65_01989 PF07536 HWE histidine kinase A6F65_01989 PF13426 PAS domain A6F65_01990 PF00072 Response regulator receiver domain A6F65_01992 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_01992 PF08918 PhoQ Sensor A6F65_01993 PF00072 Response regulator receiver domain A6F65_01993 PF00486 Transcriptional regulatory protein, C terminal A6F65_01995 PF04402 Protein of unknown function (DUF541) A6F65_01998 PF00196 Bacterial regulatory proteins, luxR family A6F65_02003 PF00534 Glycosyl transferases group 1 A6F65_02003 PF13439 Glycosyltransferase Family 4 A6F65_02004 PF07549 SecD/SecF GG Motif A6F65_02004 PF02355 Protein export membrane protein A6F65_02005 PF07549 SecD/SecF GG Motif A6F65_02005 PF02355 Protein export membrane protein A6F65_02006 PF02699 Preprotein translocase subunit A6F65_02009 PF01220 Dehydroquinase class II A6F65_02010 PF00364 Biotin-requiring enzyme A6F65_02011 PF00289 Biotin carboxylase, N-terminal domain A6F65_02011 PF02785 Biotin carboxylase C-terminal domain A6F65_02011 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6F65_02014 PF01037 Lrp/AsnC ligand binding domain A6F65_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_02015 PF00512 His Kinase A (phospho-acceptor) domain A6F65_02019 PF01554 MatE A6F65_02022 PF02225 PA domain A6F65_02022 PF04389 Peptidase family M28 A6F65_02024 PF00005 ABC transporter A6F65_02024 PF12848 ABC transporter A6F65_02030 PF01921 tRNA synthetases class I (K) A6F65_02031 PF05552 Conserved TM helix A6F65_02031 PF00924 Mechanosensitive ion channel A6F65_02032 PF13307 Helicase C-terminal domain A6F65_02032 PF06733 DEAD_2 A6F65_02034 PF13411 MerR HTH family regulatory protein A6F65_02035 PF00216 Bacterial DNA-binding protein A6F65_02036 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A6F65_02036 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A6F65_02037 PF02504 Fatty acid synthesis protein A6F65_02038 PF01783 Ribosomal L32p protein family A6F65_02040 PF00753 Metallo-beta-lactamase superfamily A6F65_02041 PF01661 Macro domain A6F65_02046 PF01406 tRNA synthetases class I (C) catalytic domain A6F65_02048 PF01406 tRNA synthetases class I (C) catalytic domain A6F65_02049 PF11775 Cobalamin biosynthesis protein CobT VWA domain A6F65_02049 PF06213 Cobalamin biosynthesis protein CobT A6F65_02053 PF18074 Primosomal protein N C-terminal domain A6F65_02053 PF00270 DEAD/DEAH box helicase A6F65_02053 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A6F65_02053 PF17764 3′ DNA-binding domain (3′BD) A6F65_02054 PF01209 ubiE/COQ5 methyltransferase family A6F65_02055 PF02219 Methylenetetrahydrofolate reductase A6F65_02056 PF02574 Homocysteine S-methyltransferase A6F65_02056 PF02607 B12 binding domain A6F65_02056 PF02310 B12 binding domain A6F65_02056 PF02965 Vitamin B12 dependent methionine synthase, activation domain A6F65_02056 PF00809 Pterin binding enzyme A6F65_02057 PF02965 Vitamin B12 dependent methionine synthase, activation domain A6F65_02057 PF02310 B12 binding domain A6F65_02057 PF02607 B12 binding domain A6F65_02057 PF02574 Homocysteine S-methyltransferase A6F65_02057 PF00809 Pterin binding enzyme A6F65_02058 PF01638 HxlR-like helix-turn-helix A6F65_02059 PF02525 Flavodoxin-like fold A6F65_02060 PF04244 Deoxyribodipyrimidine photo-lyase-related protein A6F65_02061 PF01040 UbiA prenyltransferase family A6F65_02062 PF04452 RNA methyltransferase A6F65_02063 PF04107 Glutamate-cysteine ligase family 2(GCS2) A6F65_02068 PF00561 alpha/beta hydrolase fold A6F65_02069 PF02696 Uncharacterized ACR, YdiU/UPF0061 family A6F65_02070 PF00171 Aldehyde dehydrogenase family A6F65_02073 PF00892 EamA-like transporter family A6F65_02074 PF01979 Amidohydrolase family A6F65_02079 PF00593 TonB dependent receptor A6F65_02079 PF07715 TonB-dependent Receptor Plug Domain A6F65_02081 PF01259 SAICAR synthetase A6F65_02082 PF05193 Peptidase M16 inactive domain A6F65_02082 PF00675 Insulinase (Peptidase family M16) A6F65_02084 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase A6F65_02086 PF08448 PAS fold A6F65_02086 PF08447 PAS fold A6F65_02086 PF00990 Diguanylate cyclase, GGDEF domain A6F65_02086 PF00563 EAL domain A6F65_02087 PF01380 SIS domain A6F65_02089 PF12804 MobA-like NTP transferase domain A6F65_02089 PF14602 Hexapeptide repeat of succinyl-transferase A6F65_02089 PF00132 Bacterial transferase hexapeptide (six repeats) A6F65_02092 PF00132 Bacterial transferase hexapeptide (six repeats) A6F65_02095 PF02769 AIR synthase related protein, C-terminal domain A6F65_02095 PF00586 AIR synthase related protein, N-terminal domain A6F65_02096 PF00551 Formyl transferase A6F65_02098 PF00334 Nucleoside diphosphate kinase A6F65_02101 PF00883 Cytosol aminopeptidase family, catalytic domain A6F65_02101 PF02789 Cytosol aminopeptidase family, N-terminal domain A6F65_02102 PF03968 OstA-like protein A6F65_02102 PF04453 LPS transport system D A6F65_02103 PF00639 PPIC-type PPIASE domain A6F65_02103 PF09312 SurA N-terminal domain A6F65_02104 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A6F65_02105 PF00398 Ribosomal RNA adenine dimethylase A6F65_02106 PF01546 Peptidase family M20/M25/M40 A6F65_02106 PF07687 Peptidase dimerisation domain A6F65_02107 PF04958 Arginine N-succinyltransferase beta subunit A6F65_02108 PF04996 Succinylarginine dihydrolase A6F65_02111 PF01741 Large-conductance mechanosensitive channel, MscL A6F65_02114 PF04536 TPM domain A6F65_02116 PF00293 NUDIX domain A6F65_02120 PF07670 Nucleoside recognition A6F65_02120 PF07662 Na+ dependent nucleoside transporter C-terminus A6F65_02120 PF01773 Na+ dependent nucleoside transporter N-terminus A6F65_02122 PF07690 Major Facilitator Superfamily A6F65_02123 PF00171 Aldehyde dehydrogenase family A6F65_02126 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6F65_02126 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6F65_02126 PF02770 Acyl-CoA dehydrogenase, middle domain A6F65_02127 PF01979 Amidohydrolase family A6F65_02128 PF00067 Cytochrome P450 A6F65_02134 PF00106 short chain dehydrogenase A6F65_02137 PF01557 Fumarylacetoacetate (FAA) hydrolase family A6F65_02139 PF01047 MarR family A6F65_02142 PF00941 FAD binding domain in molybdopterin dehydrogenase A6F65_02142 PF03450 CO dehydrogenase flavoprotein C-terminal domain A6F65_02143 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase A6F65_02143 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A6F65_02144 PF00111 2Fe-2S iron-sulfur cluster binding domain A6F65_02144 PF01799 [2Fe-2S] binding domain A6F65_02145 PF13393 Histidyl-tRNA synthetase A6F65_02146 PF01011 PQQ enzyme repeat A6F65_02146 PF13360 PQQ-like domain A6F65_02147 PF07715 TonB-dependent Receptor Plug Domain A6F65_02147 PF00593 TonB dependent receptor A6F65_02150 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A6F65_02150 PF00355 Rieske [2Fe-2S] domain A6F65_02154 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6F65_02155 PF02913 FAD linked oxidases, C-terminal domain A6F65_02155 PF01565 FAD binding domain A6F65_02175 PF01061 ABC-2 type transporter A6F65_02178 PF00107 Zinc-binding dehydrogenase A6F65_02178 PF08240 Alcohol dehydrogenase GroES-like domain A6F65_02179 PF08240 Alcohol dehydrogenase GroES-like domain A6F65_02179 PF00107 Zinc-binding dehydrogenase A6F65_02181 PF01138 3' exoribonuclease family, domain 1 A6F65_02181 PF03725 3' exoribonuclease family, domain 2 A6F65_02181 PF00575 S1 RNA binding domain A6F65_02181 PF00013 KH domain A6F65_02181 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A6F65_02182 PF00312 Ribosomal protein S15 A6F65_02183 PF01509 TruB family pseudouridylate synthase (N terminal domain) A6F65_02183 PF16198 tRNA pseudouridylate synthase B C-terminal domain A6F65_02184 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A6F65_02184 PF01266 FAD dependent oxidoreductase A6F65_02185 PF02163 Peptidase family M50 A6F65_02186 PF00265 Thymidine kinase A6F65_02188 PF02033 Ribosome-binding factor A A6F65_02191 PF00009 Elongation factor Tu GTP binding domain A6F65_02191 PF08364 Bacterial translation initiation factor IF-2 associated region A6F65_02191 PF11987 Translation-initiation factor 2 A6F65_02191 PF04760 Translation initiation factor IF-2, N-terminal region A6F65_02192 PF04296 Protein of unknown function (DUF448) A6F65_02193 PF00575 S1 RNA binding domain A6F65_02193 PF08529 NusA N-terminal domain A6F65_02193 PF13184 NusA-like KH domain A6F65_02194 PF02576 RimP N-terminal domain A6F65_02194 PF17384 RimP C-terminal SH3 domain A6F65_02198 PF02954 Bacterial regulatory protein, Fis family A6F65_02198 PF00158 Sigma-54 interaction domain A6F65_02200 PF04012 PspA/IM30 family A6F65_02206 PF02657 Fe-S metabolism associated domain A6F65_02207 PF01679 Proteolipid membrane potential modulator A6F65_02209 PF04116 Fatty acid hydroxylase superfamily A6F65_02210 PF00487 Fatty acid desaturase A6F65_02213 PF00462 Glutaredoxin A6F65_02216 PF00694 Aconitase C-terminal domain A6F65_02218 PF00330 Aconitase family (aconitate hydratase) A6F65_02222 PF02463 RecF/RecN/SMC N terminal domain A6F65_02224 PF00005 ABC transporter A6F65_02227 PF00593 TonB dependent receptor A6F65_02227 PF07715 TonB-dependent Receptor Plug Domain A6F65_02228 PF07853 Protein of unknown function (DUF1648) A6F65_02228 PF13630 SdpI/YhfL protein family A6F65_02229 PF01022 Bacterial regulatory protein, arsR family A6F65_02232 PF00004 ATPase family associated with various cellular activities (AAA) A6F65_02232 PF12002 MgsA AAA+ ATPase C terminal A6F65_02232 PF16193 AAA C-terminal domain A6F65_02235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A6F65_02235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A6F65_02235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A6F65_02236 PF14489 QueF-like protein A6F65_02238 PF00581 Rhodanese-like domain A6F65_02239 PF01053 Cys/Met metabolism PLP-dependent enzyme A6F65_02240 PF00924 Mechanosensitive ion channel A6F65_02241 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6F65_02241 PF14824 Sirohaem biosynthesis protein central A6F65_02241 PF10414 Sirohaem synthase dimerisation region A6F65_02243 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A6F65_02243 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A6F65_02245 PF01507 Phosphoadenosine phosphosulfate reductase family A6F65_02247 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family A6F65_02248 PF00696 Amino acid kinase family A6F65_02248 PF01472 PUA domain A6F65_02249 PF01926 50S ribosome-binding GTPase A6F65_02249 PF01018 GTP1/OBG A6F65_02251 PF01027 Inhibitor of apoptosis-promoting Bax1 A6F65_02252 PF14748 Pyrroline-5-carboxylate reductase dimerisation A6F65_02252 PF03807 NADP oxidoreductase coenzyme F420-dependent A6F65_02255 PF00091 Tubulin/FtsZ family, GTPase domain A6F65_02255 PF12327 FtsZ family, C-terminal domain A6F65_02256 PF02491 SHS2 domain inserted in FTSA A6F65_02257 PF03799 Cell division protein FtsQ A6F65_02257 PF08478 POTRA domain, FtsQ-type A6F65_02258 PF07478 D-ala D-ala ligase C-terminus A6F65_02258 PF01820 D-ala D-ala ligase N-terminus A6F65_02259 PF01565 FAD binding domain A6F65_02259 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A6F65_02260 PF02875 Mur ligase family, glutamate ligase domain A6F65_02260 PF08245 Mur ligase middle domain A6F65_02260 PF01225 Mur ligase family, catalytic domain A6F65_02261 PF04101 Glycosyltransferase family 28 C-terminal domain A6F65_02261 PF03033 Glycosyltransferase family 28 N-terminal domain A6F65_02262 PF01098 Cell cycle protein A6F65_02263 PF08245 Mur ligase middle domain A6F65_02263 PF02875 Mur ligase family, glutamate ligase domain A6F65_02264 PF00953 Glycosyl transferase family 4 A6F65_02264 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A6F65_02265 PF08245 Mur ligase middle domain A6F65_02265 PF02875 Mur ligase family, glutamate ligase domain A6F65_02265 PF01225 Mur ligase family, catalytic domain A6F65_02266 PF01225 Mur ligase family, catalytic domain A6F65_02266 PF02875 Mur ligase family, glutamate ligase domain A6F65_02266 PF08245 Mur ligase middle domain A6F65_02267 PF00905 Penicillin binding protein transpeptidase domain A6F65_02267 PF03717 Penicillin-binding Protein dimerisation domain A6F65_02269 PF01795 MraW methylase family A6F65_02270 PF02381 MraZ protein, putative antitoxin-like A6F65_02273 PF00291 Pyridoxal-phosphate dependent enzyme A6F65_02274 PF00111 2Fe-2S iron-sulfur cluster binding domain A6F65_02276 PF00326 Prolyl oligopeptidase family A6F65_02278 PF00106 short chain dehydrogenase A6F65_02279 PF01329 Pterin 4 alpha carbinolamine dehydratase A6F65_02280 PF00005 ABC transporter A6F65_02281 PF03379 CcmB protein A6F65_02282 PF00557 Metallopeptidase family M24 A6F65_02284 PF02789 Cytosol aminopeptidase family, N-terminal domain A6F65_02284 PF00883 Cytosol aminopeptidase family, catalytic domain A6F65_02287 PF00543 Nitrogen regulatory protein P-II A6F65_02288 PF03951 Glutamine synthetase, beta-Grasp domain A6F65_02288 PF00120 Glutamine synthetase, catalytic domain A6F65_02290 PF01381 Helix-turn-helix A6F65_02295 PF07244 Surface antigen variable number repeat A6F65_02295 PF01103 Surface antigen A6F65_02295 PF17243 POTRA domain TamA domain 1 A6F65_02296 PF04377 Arginine-tRNA-protein transferase, C terminus A6F65_02296 PF04376 Arginine-tRNA-protein transferase, N terminus A6F65_02297 PF00291 Pyridoxal-phosphate dependent enzyme A6F65_02297 PF13291 ACT domain A6F65_02298 PF07969 Amidohydrolase family A6F65_02299 PF00902 Sec-independent protein translocase protein (TatC) A6F65_02301 PF02416 mttA/Hcf106 family A6F65_02302 PF04079 Segregation and condensation complex subunit ScpB A6F65_02303 PF02616 Segregation and condensation protein ScpA A6F65_02304 PF00933 Glycosyl hydrolase family 3 N terminal domain A6F65_02306 PF00133 tRNA synthetases class I (I, L, M and V) A6F65_02306 PF03485 Arginyl tRNA synthetase N terminal domain A6F65_02306 PF00750 tRNA synthetases class I (R) A6F65_02306 PF05746 DALR anticodon binding domain A6F65_02308 PF02401 LytB protein A6F65_02309 PF01636 Phosphotransferase enzyme family A6F65_02310 PF00075 RNase H A6F65_02311 PF07411 Domain of unknown function (DUF1508) A6F65_02312 PF01266 FAD dependent oxidoreductase A6F65_02316 PF04972 BON domain A6F65_02316 PF00263 Bacterial type II and III secretion system protein A6F65_02316 PF13629 Pilus formation protein N terminal region A6F65_02322 PF01048 Phosphorylase superfamily A6F65_02323 PF00106 short chain dehydrogenase A6F65_02325 PF00004 ATPase family associated with various cellular activities (AAA) A6F65_02325 PF07724 AAA domain (Cdc48 subfamily) A6F65_02325 PF02861 Clp amino terminal domain, pathogenicity island component A6F65_02325 PF10431 C-terminal, D2-small domain, of ClpB protein A6F65_02325 PF17871 AAA lid domain A6F65_02328 PF00005 ABC transporter A6F65_02331 PF00588 SpoU rRNA Methylase family A6F65_02332 PF02637 GatB domain A6F65_02332 PF02934 GatB/GatE catalytic domain A6F65_02335 PF01425 Amidase A6F65_02336 PF02686 Glu-tRNAGln amidotransferase C subunit A6F65_02337 PF00027 Cyclic nucleotide-binding domain A6F65_02337 PF01734 Patatin-like phospholipase A6F65_02339 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6F65_02339 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6F65_02340 PF01165 Ribosomal protein S21 A6F65_02341 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A6F65_02342 PF01479 S4 domain A6F65_02342 PF00849 RNA pseudouridylate synthase A6F65_02343 PF13419 Haloacid dehalogenase-like hydrolase A6F65_02348 PF00005 ABC transporter A6F65_02349 PF02405 Permease MlaE A6F65_02350 PF10458 Valyl tRNA synthetase tRNA binding arm A6F65_02350 PF00133 tRNA synthetases class I (I, L, M and V) A6F65_02350 PF08264 Anticodon-binding domain of tRNA A6F65_02352 PF04055 Radical SAM superfamily A6F65_02356 PF01925 Sulfite exporter TauE/SafE A6F65_02358 PF13632 Glycosyl transferase family group 2 A6F65_02358 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A6F65_02359 PF06965 Na+/H+ antiporter 1 A6F65_02362 PF00149 Calcineurin-like phosphoesterase A6F65_02363 PF01510 N-acetylmuramoyl-L-alanine amidase A6F65_02364 PF10090 Histidine phosphotransferase C-terminal domain A6F65_02366 PF00849 RNA pseudouridylate synthase A6F65_02367 PF00140 Sigma-70 factor, region 1.2 A6F65_02367 PF04545 Sigma-70, region 4 A6F65_02367 PF04542 Sigma-70 region 2 A6F65_02368 PF00912 Transglycosylase A6F65_02369 PF01545 Cation efflux family A6F65_02369 PF16916 Dimerisation domain of Zinc Transporter A6F65_02370 PF04545 Sigma-70, region 4 A6F65_02370 PF04542 Sigma-70 region 2 A6F65_02372 PF02469 Fasciclin domain A6F65_02373 PF00144 Beta-lactamase A6F65_02376 PF10431 C-terminal, D2-small domain, of ClpB protein A6F65_02376 PF07724 AAA domain (Cdc48 subfamily) A6F65_02376 PF06689 ClpX C4-type zinc finger A6F65_02377 PF00574 Clp protease A6F65_02379 PF01425 Amidase A6F65_02381 PF05697 Bacterial trigger factor protein (TF) A6F65_02381 PF05698 Bacterial trigger factor protein (TF) C-terminus A6F65_02381 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6F65_02386 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A6F65_02386 PF01926 50S ribosome-binding GTPase A6F65_02389 PF00210 Ferritin-like domain A6F65_02391 PF04235 Protein of unknown function (DUF418) A6F65_02393 PF13614 AAA domain A6F65_02396 PF01979 Amidohydrolase family A6F65_02397 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6F65_02397 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6F65_02398 PF01343 Peptidase family S49 A6F65_02401 PF13439 Glycosyltransferase Family 4 A6F65_02401 PF00534 Glycosyl transferases group 1 A6F65_02402 PF00862 Sucrose synthase A6F65_02402 PF00534 Glycosyl transferases group 1 A6F65_02408 PF09347 Domain of unknown function (DUF1989) A6F65_02415 PF00589 Phage integrase family A6F65_02415 PF02899 Phage integrase, N-terminal SAM-like domain A6F65_02416 PF00403 Heavy-metal-associated domain A6F65_02417 PF00873 AcrB/AcrD/AcrF family A6F65_02418 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6F65_02421 PF01555 DNA methylase A6F65_02427 PF00072 Response regulator receiver domain A6F65_02427 PF00196 Bacterial regulatory proteins, luxR family A6F65_02428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6F65_02428 PF07730 Histidine kinase A6F65_02430 PF03448 MgtE intracellular N domain A6F65_02430 PF01769 Divalent cation transporter A6F65_02430 PF00571 CBS domain A6F65_02431 PF00149 Calcineurin-like phosphoesterase A6F65_02432 PF00072 Response regulator receiver domain A6F65_02432 PF00211 Adenylate and Guanylate cyclase catalytic domain A6F65_02434 PF00923 Transaldolase/Fructose-6-phosphate aldolase A6F65_02436 PF02403 Seryl-tRNA synthetase N-terminal domain A6F65_02436 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6F65_02437 PF01975 Survival protein SurE A6F65_02438 PF01551 Peptidase family M23 A6F65_02438 PF01476 LysM domain A6F65_02441 PF04055 Radical SAM superfamily A6F65_02441 PF00919 Uncharacterized protein family UPF0004 A6F65_02441 PF18693 TRAM domain A6F65_02446 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A6F65_02446 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A6F65_02447 PF00920 Dehydratase family A6F65_02448 PF02685 Glucokinase A6F65_02449 PF01081 KDPG and KHG aldolase A6F65_02452 PF01171 PP-loop family A6F65_02455 PF02896 PEP-utilising enzyme, TIM barrel domain A6F65_02455 PF00391 PEP-utilising enzyme, mobile domain A6F65_02455 PF01590 GAF domain A6F65_02455 PF05524 PEP-utilising enzyme, N-terminal A6F65_02459 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A6F65_02459 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A6F65_02462 PF02445 Quinolinate synthetase A protein A6F65_02466 PF10011 Predicted membrane protein (DUF2254) A6F65_02467 PF10011 Predicted membrane protein (DUF2254) A6F65_02470 PF03328 HpcH/HpaI aldolase/citrate lyase family A6F65_02472 PF03099 Biotin/lipoate A/B protein ligase family A6F65_02475 PF03960 ArsC family A6F65_02476 PF00593 TonB dependent receptor A6F65_02476 PF07715 TonB-dependent Receptor Plug Domain A6F65_02477 PF01799 [2Fe-2S] binding domain A6F65_02477 PF00111 2Fe-2S iron-sulfur cluster binding domain A6F65_02478 PF01554 MatE A6F65_02479 PF00171 Aldehyde dehydrogenase family A6F65_02481 PF00528 Binding-protein-dependent transport system inner membrane component A6F65_02482 PF00005 ABC transporter A6F65_02482 PF03459 TOBE domain A6F65_02483 PF02503 Polyphosphate kinase middle domain A6F65_02483 PF13089 Polyphosphate kinase N-terminal domain A6F65_02483 PF17941 Polyphosphate kinase C-terminal domain 1 A6F65_02483 PF13090 Polyphosphate kinase C-terminal domain 2 A6F65_02484 PF02541 Ppx/GppA phosphatase family A6F65_02486 PF04820 Tryptophan halogenase A6F65_02489 PF00486 Transcriptional regulatory protein, C terminal A6F65_02489 PF00072 Response regulator receiver domain A6F65_02490 PF00155 Aminotransferase class I and II A6F65_02491 PF00561 alpha/beta hydrolase fold A6F65_02491 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus A6F65_02493 PF02617 ATP-dependent Clp protease adaptor protein ClpS A6F65_02500 PF00072 Response regulator receiver domain A6F65_02501 PF07536 HWE histidine kinase A6F65_02501 PF08447 PAS fold A6F65_02501 PF13426 PAS domain A6F65_02503 PF04542 Sigma-70 region 2 A6F65_02503 PF08281 Sigma-70, region 4 A6F65_02505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A6F65_02505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A6F65_02507 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6F65_02507 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6F65_02507 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6F65_02507 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6F65_02508 PF08543 Phosphomethylpyrimidine kinase A6F65_02508 PF03070 TENA/THI-4/PQQC family A6F65_02508 PF02581 Thiamine monophosphate synthase A6F65_02509 PF03641 Possible lysine decarboxylase A6F65_02512 PF01728 FtsJ-like methyltransferase A6F65_02513 PF00034 Cytochrome c A6F65_02514 PF00800 Prephenate dehydratase A6F65_02517 PF17863 AAA lid domain A6F65_02517 PF07726 ATPase family associated with various cellular activities (AAA) A6F65_02521 PF00583 Acetyltransferase (GNAT) family A6F65_02523 PF05552 Conserved TM helix A6F65_02526 PF01544 CorA-like Mg2+ transporter protein A6F65_02527 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6F65_02528 PF04551 GcpE protein A6F65_02530 PF00850 Histone deacetylase domain A6F65_02533 PF03734 L,D-transpeptidase catalytic domain A6F65_02533 PF01471 Putative peptidoglycan binding domain A6F65_02536 PF00330 Aconitase family (aconitate hydratase) A6F65_02536 PF00694 Aconitase C-terminal domain A6F65_02537 PF00581 Rhodanese-like domain A6F65_02540 PF05496 Holliday junction DNA helicase RuvB P-loop domain A6F65_02540 PF17864 RuvB AAA lid domain A6F65_02540 PF05491 RuvB C-terminal winged helix domain A6F65_02541 PF01330 RuvA N terminal domain A6F65_02541 PF07499 RuvA, C-terminal domain A6F65_02542 PF01264 Chorismate synthase A6F65_02544 PF00141 Peroxidase A6F65_02545 PF00171 Aldehyde dehydrogenase family A6F65_02549 PF02556 Preprotein translocase subunit SecB A6F65_02550 PF03023 Lipid II flippase MurJ A6F65_02551 PF00579 tRNA synthetases class I (W and Y) A6F65_02555 PF00692 dUTPase A6F65_02556 PF02441 Flavoprotein A6F65_02556 PF04127 DNA / pantothenate metabolism flavoprotein A6F65_02560 PF03109 ABC1 family A6F65_02561 PF01209 ubiE/COQ5 methyltransferase family A6F65_02562 PF06827 Zinc finger found in FPG and IleRS A6F65_02562 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A6F65_02562 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A6F65_02563 PF01649 Ribosomal protein S20