A6F65_00001 SM00760 Bacterial dnaA protein helix-turn-helix domain A6F65_00008 SM00478 endonuclease III A6F65_00008 SM00525 A6F65_00008 A6F65_00015 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. A6F65_00019 SM01234 A6F65_00019 A6F65_00024 SM00382 ATPases associated with a variety of cellular activities A6F65_00029 SM00829 Enoylreductase A6F65_00040 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F65_00040 SM00866 A6F65_00040 A6F65_00067 SM00344 helix_turn_helix ASNC type A6F65_00089 SM00382 ATPases associated with a variety of cellular activities A6F65_00090 SM00155 Phospholipase D. Active site motifs. A6F65_00091 SM01409 A6F65_00091 A6F65_00094 SM00382 ATPases associated with a variety of cellular activities A6F65_00099 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A6F65_00099 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A6F65_00101 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A6F65_00114 SM00028 Tetratricopeptide repeats A6F65_00131 SM01018 B12 binding domain A6F65_00132 SM00342 helix_turn_helix, arabinose operon control protein A6F65_00142 SM00905 Dihydroneopterin aldolase A6F65_00155 SM00244 prohibitin homologues A6F65_00184 SM00663 RNA polymerase I subunit A N-terminus A6F65_00188 SM00530 Helix-turn-helix XRE-family like proteins A6F65_00198 SM00883 Chaperonin 10 Kd subunit A6F65_00203 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A6F65_00203 SM00474 3'-5' exonuclease A6F65_00203 SM00475 5'-3' exonuclease A6F65_00203 SM00482 DNA polymerase A domain A6F65_00204 SM00911 HWE histidine kinase A6F65_00206 SM00382 ATPases associated with a variety of cellular activities A6F65_00206 SM01072 Cell division protein 48 (CDC48) domain 2 A6F65_00206 SM01073 Cell division protein 48 (CDC48) N-terminal domain A6F65_00207 SM00882 Coenzyme A transferase A6F65_00209 SM00882 Coenzyme A transferase A6F65_00220 SM00937 A6F65_00220 A6F65_00227 SM00382 ATPases associated with a variety of cellular activities A6F65_00229 SM00448 cheY-homologous receiver domain A6F65_00229 SM00862 Transcriptional regulatory protein, C terminal A6F65_00233 SM00947 Carbonic anhydrase A6F65_00234 SM00919 Malic enzyme, NAD binding domain A6F65_00234 SM01274 A6F65_00234 A6F65_00235 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A6F65_00235 SM00534 ATPase domain of DNA mismatch repair MUTS family A6F65_00241 SM00507 HNH nucleases A6F65_00249 SM00671 Sel1-like repeats. A6F65_00255 SM00448 cheY-homologous receiver domain A6F65_00262 SM00465 GIY-YIG type nucleases (URI domain) A6F65_00284 SM00357 Cold shock protein domain A6F65_00288 SM00869 Autotransporter beta-domain A6F65_00290 SM00938 Nitrogen regulatory protein P-II A6F65_00295 SM00873 B3/4 domain A6F65_00295 SM00874 tRNA synthetase B5 domain A6F65_00295 SM00896 Ferredoxin-fold anticodon binding domain A6F65_00300 SM00342 helix_turn_helix, arabinose operon control protein A6F65_00301 SM01400 A6F65_00301 A6F65_00310 SM00487 DEAD-like helicases superfamily A6F65_00310 SM00490 helicase superfamily c-terminal domain A6F65_00313 SM00271 DnaJ molecular chaperone homology domain A6F65_00323 SM00530 Helix-turn-helix XRE-family like proteins A6F65_00341 SM00855 Phosphoglycerate mutase family A6F65_00342 SM01001 AIR carboxylase A6F65_00346 SM00904 Riboflavin kinase A6F65_00350 SM01091 Transporter associated domain A6F65_00356 SM00893 Electron transfer flavoprotein domain A6F65_00357 SM00893 Electron transfer flavoprotein domain A6F65_00373 SM00271 DnaJ molecular chaperone homology domain A6F65_00381 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F65_00381 SM00245 tail specific protease A6F65_00390 SM00829 Enoylreductase A6F65_00392 SM00382 ATPases associated with a variety of cellular activities A6F65_00392 SM01086 C-terminal, D2-small domain, of ClpB protein A6F65_00401 SM01004 Delta-aminolevulinic acid dehydratase A6F65_00403 SM00490 helicase superfamily c-terminal domain A6F65_00404 SM00363 S4 RNA-binding domain A6F65_00407 SM01058 CarD-like/TRCF domain A6F65_00413 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F65_00418 SM00470 ParB-like nuclease domain A6F65_00421 SM01228 A6F65_00421 A6F65_00427 SM01034 Sensors of blue-light using FAD A6F65_00428 SM00357 Cold shock protein domain A6F65_00428 SM00382 ATPases associated with a variety of cellular activities A6F65_00428 SM00959 Rho termination factor, N-terminal domain A6F65_00435 SM00479 A6F65_00435 A6F65_00443 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F65_00451 SM00387 Histidine kinase-like ATPases A6F65_00452 SM00448 cheY-homologous receiver domain A6F65_00452 SM00850 LytTr DNA-binding domain A6F65_00481 SM01209 A6F65_00481 A6F65_00481 SM01210 A6F65_00481 A6F65_00493 SM00448 cheY-homologous receiver domain A6F65_00493 SM00850 LytTr DNA-binding domain A6F65_00505 SM00382 ATPases associated with a variety of cellular activities A6F65_00510 SM00849 Metallo-beta-lactamase superfamily A6F65_00516 SM00411 bacterial (prokaryotic) histone like domain A6F65_00517 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F65_00525 SM00861 Transketolase, pyrimidine binding domain A6F65_00530 SM00798 AICARFT/IMPCHase bienzyme A6F65_00530 SM00851 MGS-like domain A6F65_00546 SM00382 ATPases associated with a variety of cellular activities A6F65_00558 SM00822 A6F65_00558 A6F65_00560 SM00421 helix_turn_helix, Lux Regulon A6F65_00574 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A6F65_00579 SM00530 Helix-turn-helix XRE-family like proteins A6F65_00598 SM00474 3'-5' exonuclease A6F65_00599 SM00986 Uracil DNA glycosylase superfamily A6F65_00599 SM00987 UreE urease accessory protein, C-terminal domain A6F65_00608 SM00382 ATPases associated with a variety of cellular activities A6F65_00616 SM00341 Helicase and RNase D C-terminal A6F65_00616 SM00487 DEAD-like helicases superfamily A6F65_00616 SM00490 helicase superfamily c-terminal domain A6F65_00616 SM00956 A6F65_00616 A6F65_00630 SM00382 ATPases associated with a variety of cellular activities A6F65_00633 SM00387 Histidine kinase-like ATPases A6F65_00633 SM00388 His Kinase A (phosphoacceptor) domain A6F65_00634 SM00448 cheY-homologous receiver domain A6F65_00634 SM00862 Transcriptional regulatory protein, C terminal A6F65_00635 SM00054 EF-hand, calcium binding motif A6F65_00639 SM00487 DEAD-like helicases superfamily A6F65_00639 SM00490 helicase superfamily c-terminal domain A6F65_00641 SM00843 A6F65_00641 A6F65_00646 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F65_00649 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F65_00649 SM00091 PAS domain A6F65_00649 SM00911 HWE histidine kinase A6F65_00654 SM00563 Phosphate acyltransferases A6F65_00656 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A6F65_00656 SM00869 Autotransporter beta-domain A6F65_00657 SM00387 Histidine kinase-like ATPases A6F65_00657 SM00433 TopoisomeraseII A6F65_00662 SM00478 endonuclease III A6F65_00663 SM00478 endonuclease III A6F65_00663 SM00525 A6F65_00663 A6F65_00665 SM00342 helix_turn_helix, arabinose operon control protein A6F65_00670 SM00382 ATPases associated with a variety of cellular activities A6F65_00680 SM00028 Tetratricopeptide repeats A6F65_00691 SM00671 Sel1-like repeats. A6F65_00702 SM00464 Found in ATP-dependent protease La (LON) A6F65_00711 SM00387 Histidine kinase-like ATPases A6F65_00711 SM00388 His Kinase A (phosphoacceptor) domain A6F65_00712 SM00448 cheY-homologous receiver domain A6F65_00712 SM00862 Transcriptional regulatory protein, C terminal A6F65_00721 SM00878 Biotin carboxylase C-terminal domain A6F65_00724 SM00382 ATPases associated with a variety of cellular activities A6F65_00731 SM00091 PAS domain A6F65_00731 SM00138 Methyltransferase, chemotaxis proteins A6F65_00731 SM00911 HWE histidine kinase A6F65_00732 SM00448 cheY-homologous receiver domain A6F65_00739 SM00354 helix_turn _helix lactose operon repressor A6F65_00747 SM00382 ATPases associated with a variety of cellular activities A6F65_00750 SM00563 Phosphate acyltransferases A6F65_00758 SM00829 Enoylreductase A6F65_00763 SM00852 Probable molybdopterin binding domain A6F65_00766 SM00649 Ribosomal protein L11/L12 A6F65_00769 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A6F65_00769 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A6F65_00790 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F65_00790 SM00448 cheY-homologous receiver domain A6F65_00790 SM00911 HWE histidine kinase A6F65_00793 SM00448 cheY-homologous receiver domain A6F65_00794 SM00091 PAS domain A6F65_00794 SM00387 Histidine kinase-like ATPases A6F65_00794 SM00388 His Kinase A (phosphoacceptor) domain A6F65_00794 SM00448 cheY-homologous receiver domain A6F65_00810 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A6F65_00812 SM00244 prohibitin homologues A6F65_00813 SM00244 prohibitin homologues A6F65_00814 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F65_00835 SM00984 UDP binding domain A6F65_00842 SM00382 ATPases associated with a variety of cellular activities A6F65_00845 SM00642 Alpha-amylase domain A6F65_00846 SM00642 Alpha-amylase domain A6F65_00849 SM00354 helix_turn _helix lactose operon repressor A6F65_00861 SM00248 ankyrin repeats A6F65_00863 SM00899 A6F65_00863 A6F65_00874 SM00382 ATPases associated with a variety of cellular activities A6F65_00874 SM01086 C-terminal, D2-small domain, of ClpB protein A6F65_00878 SM00382 ATPases associated with a variety of cellular activities A6F65_00888 SM00487 DEAD-like helicases superfamily A6F65_00888 SM00490 helicase superfamily c-terminal domain A6F65_00893 SM00421 helix_turn_helix, Lux Regulon A6F65_00894 SM00354 helix_turn _helix lactose operon repressor A6F65_00896 SM00226 Low molecular weight phosphatase family A6F65_00909 SM00354 helix_turn _helix lactose operon repressor A6F65_00916 SM00869 Autotransporter beta-domain A6F65_00919 SM00633 Glycosyl hydrolase family 10 A6F65_00928 SM00878 Biotin carboxylase C-terminal domain A6F65_00941 SM00382 ATPases associated with a variety of cellular activities A6F65_00945 SM00421 helix_turn_helix, Lux Regulon A6F65_00958 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. A6F65_00961 SM00357 Cold shock protein domain A6F65_00963 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. A6F65_00968 SM00151 SWI complex, BAF60b domains A6F65_00979 SM00072 Guanylate kinase homologues. A6F65_00997 SM00271 DnaJ molecular chaperone homology domain A6F65_01009 SM01263 A6F65_01009 A6F65_01013 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F65_01013 SM00954 Region found in RelA / SpoT proteins A6F65_01027 SM00354 helix_turn _helix lactose operon repressor A6F65_01041 SM00354 helix_turn _helix lactose operon repressor A6F65_01048 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A6F65_01048 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A6F65_01064 SM00487 DEAD-like helicases superfamily A6F65_01064 SM00490 helicase superfamily c-terminal domain A6F65_01070 SM00460 Transglutaminase/protease-like homologues A6F65_01072 SM00421 helix_turn_helix, Lux Regulon A6F65_01077 SM00448 cheY-homologous receiver domain A6F65_01080 SM00788 Adenylosuccinate synthetase A6F65_01084 SM00870 A6F65_01084 A6F65_01095 SM00732 Likely ribonuclease with RNase H fold. A6F65_01111 SM00905 Dihydroneopterin aldolase A6F65_01113 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F65_01117 SM00100 Cyclic nucleotide-monophosphate binding domain A6F65_01117 SM00419 helix_turn_helix, cAMP Regulatory protein A6F65_01123 SM00421 helix_turn_helix, Lux Regulon A6F65_01123 SM00448 cheY-homologous receiver domain A6F65_01124 SM00387 Histidine kinase-like ATPases A6F65_01126 SM00869 Autotransporter beta-domain A6F65_01134 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6F65_01134 SM00465 GIY-YIG type nucleases (URI domain) A6F65_01135 SM00704 CDGSH-type zinc finger. Function unknown. A6F65_01138 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A6F65_01154 SM00271 DnaJ molecular chaperone homology domain A6F65_01157 SM00052 Putative diguanylate phosphodiesterase A6F65_01157 SM00267 diguanylate cyclase A6F65_01161 SM00493 A6F65_01161 A6F65_01167 SM00967 RNA 2'-O ribose methyltransferase substrate binding A6F65_01172 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F65_01172 SM00387 Histidine kinase-like ATPases A6F65_01172 SM00388 His Kinase A (phosphoacceptor) domain A6F65_01173 SM00448 cheY-homologous receiver domain A6F65_01173 SM00862 Transcriptional regulatory protein, C terminal A6F65_01179 SM00100 Cyclic nucleotide-monophosphate binding domain A6F65_01189 SM00869 Autotransporter beta-domain A6F65_01192 SM00434 DNA Topoisomerase IV A6F65_01193 SM00387 Histidine kinase-like ATPases A6F65_01193 SM00388 His Kinase A (phosphoacceptor) domain A6F65_01193 SM00448 cheY-homologous receiver domain A6F65_01204 SM00822 A6F65_01204 A6F65_01205 SM00382 ATPases associated with a variety of cellular activities A6F65_01205 SM00448 cheY-homologous receiver domain A6F65_01207 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A6F65_01207 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A6F65_01213 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F65_01225 SM00382 ATPases associated with a variety of cellular activities A6F65_01234 SM00342 helix_turn_helix, arabinose operon control protein A6F65_01240 SM00478 endonuclease III A6F65_01240 SM00525 A6F65_01240 A6F65_01245 SM00267 diguanylate cyclase A6F65_01245 SM01080 A6F65_01245 A6F65_01247 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F65_01247 SM00924 MgtE intracellular N domain A6F65_01252 SM01091 Transporter associated domain A6F65_01256 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F65_01258 SM00563 Phosphate acyltransferases A6F65_01264 SM00932 Scaffold protein Nfu/NifU N terminal A6F65_01276 SM00450 Rhodanese Homology Domain A6F65_01280 SM00363 S4 RNA-binding domain A6F65_01284 SM01329 A6F65_01284 A6F65_01288 SM00894 Excalibur calcium-binding domain A6F65_01305 SM00838 Elongation factor G C-terminus A6F65_01305 SM00889 Elongation factor G, domain IV A6F65_01307 SM01403 A6F65_01307 A6F65_01311 SM01382 A6F65_01311 A6F65_01311 SM01383 A6F65_01311 A6F65_01314 SM00322 K homology RNA-binding domain A6F65_01318 SM01374 A6F65_01318 A6F65_01319 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A6F65_01335 SM00662 RNA polymerases D A6F65_01346 SM00861 Transketolase, pyrimidine binding domain A6F65_01347 SM00881 CoA binding domain A6F65_01350 SM00052 Putative diguanylate phosphodiesterase A6F65_01350 SM00267 diguanylate cyclase A6F65_01356 SM00382 ATPases associated with a variety of cellular activities A6F65_01365 SM00448 cheY-homologous receiver domain A6F65_01385 SM01130 A6F65_01385 A6F65_01389 SM00091 PAS domain A6F65_01389 SM00387 Histidine kinase-like ATPases A6F65_01389 SM00388 His Kinase A (phosphoacceptor) domain A6F65_01389 SM00448 cheY-homologous receiver domain A6F65_01392 SM00382 ATPases associated with a variety of cellular activities A6F65_01394 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A6F65_01399 SM01329 A6F65_01399 A6F65_01408 SM00422 helix_turn_helix, mercury resistance A6F65_01410 SM00448 cheY-homologous receiver domain A6F65_01415 SM00487 DEAD-like helicases superfamily A6F65_01415 SM00490 helicase superfamily c-terminal domain A6F65_01423 SM00363 S4 RNA-binding domain A6F65_01432 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A6F65_01434 SM00998 Adenylosuccinate lyase C-terminus A6F65_01444 SM00911 HWE histidine kinase A6F65_01445 SM00849 Metallo-beta-lactamase superfamily A6F65_01446 SM00316 Ribosomal protein S1-like RNA-binding domain A6F65_01453 SM00382 ATPases associated with a variety of cellular activities A6F65_01453 SM00962 SRP54-type protein, GTPase domain A6F65_01453 SM00963 SRP54-type protein, helical bundle domain A6F65_01464 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6F65_01481 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A6F65_01483 SM00822 A6F65_01483 A6F65_01485 SM00480 DNA polymerase III beta subunit A6F65_01488 SM00052 Putative diguanylate phosphodiesterase A6F65_01488 SM00267 diguanylate cyclase A6F65_01489 SM00052 Putative diguanylate phosphodiesterase A6F65_01489 SM00267 diguanylate cyclase A6F65_01499 SM00292 breast cancer carboxy-terminal domain A6F65_01499 SM00532 Ligase N family A6F65_01506 SM00849 Metallo-beta-lactamase superfamily A6F65_01519 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F65_01519 SM01240 A6F65_01519 A6F65_01522 SM00028 Tetratricopeptide repeats A6F65_01534 SM00822 A6F65_01534 A6F65_01539 SM00861 Transketolase, pyrimidine binding domain A6F65_01547 SM00861 Transketolase, pyrimidine binding domain A6F65_01548 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6F65_01557 SM00841 Elongation factor P, C-terminal A6F65_01557 SM01185 A6F65_01557 A6F65_01564 SM00387 Histidine kinase-like ATPases A6F65_01565 SM00382 ATPases associated with a variety of cellular activities A6F65_01565 SM00448 cheY-homologous receiver domain A6F65_01566 SM00028 Tetratricopeptide repeats A6F65_01572 SM01057 Eukaryotic-type carbonic anhydrase A6F65_01573 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F65_01574 SM00986 Uracil DNA glycosylase superfamily A6F65_01574 SM00987 UreE urease accessory protein, C-terminal domain A6F65_01577 SM00448 cheY-homologous receiver domain A6F65_01577 SM00862 Transcriptional regulatory protein, C terminal A6F65_01579 SM00382 ATPases associated with a variety of cellular activities A6F65_01584 SM00387 Histidine kinase-like ATPases A6F65_01584 SM00388 His Kinase A (phosphoacceptor) domain A6F65_01590 SM00917 LeuA allosteric (dimerisation) domain A6F65_01591 SM00867 YceI-like domain A6F65_01608 SM00382 ATPases associated with a variety of cellular activities A6F65_01613 SM00363 S4 RNA-binding domain A6F65_01613 SM01390 A6F65_01613 A6F65_01614 SM00830 Chorismate mutase type II A6F65_01622 SM00400 zinc finger A6F65_01622 SM00493 A6F65_01622 A6F65_01625 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A6F65_01626 SM00851 MGS-like domain A6F65_01626 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A6F65_01633 SM01192 A6F65_01633 A6F65_01633 SM01193 A6F65_01633 A6F65_01636 SM00903 Flavin reductase like domain A6F65_01645 SM00853 MutL C terminal dimerisation domain A6F65_01645 SM01340 A6F65_01645 A6F65_01651 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F65_01657 SM00091 PAS domain A6F65_01657 SM00387 Histidine kinase-like ATPases A6F65_01657 SM00388 His Kinase A (phosphoacceptor) domain A6F65_01658 SM00382 ATPases associated with a variety of cellular activities A6F65_01658 SM00448 cheY-homologous receiver domain A6F65_01659 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F65_01659 SM00387 Histidine kinase-like ATPases A6F65_01659 SM00388 His Kinase A (phosphoacceptor) domain A6F65_01660 SM00382 ATPases associated with a variety of cellular activities A6F65_01660 SM00448 cheY-homologous receiver domain A6F65_01666 SM00849 Metallo-beta-lactamase superfamily A6F65_01671 SM00936 Penicillin-binding protein 5, C-terminal domain A6F65_01682 SM00955 A6F65_01682 A6F65_01683 SM00946 Prolyl-tRNA synthetase, C-terminal A6F65_01685 SM01005 Alanine racemase, C-terminal domain A6F65_01689 SM00382 ATPases associated with a variety of cellular activities A6F65_01691 SM00271 DnaJ molecular chaperone homology domain A6F65_01701 SM00198 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. A6F65_01702 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F65_01709 SM00387 Histidine kinase-like ATPases A6F65_01709 SM00433 TopoisomeraseII A6F65_01728 SM00530 Helix-turn-helix XRE-family like proteins A6F65_01736 SM00434 DNA Topoisomerase IV A6F65_01737 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F65_01738 SM00671 Sel1-like repeats. A6F65_01749 SM00861 Transketolase, pyrimidine binding domain A6F65_01778 SM00852 Probable molybdopterin binding domain A6F65_01784 SM00387 Histidine kinase-like ATPases A6F65_01790 SM00849 Metallo-beta-lactamase superfamily A6F65_01801 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A6F65_01806 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A6F65_01822 SM00937 A6F65_01822 A6F65_01825 SM00646 A6F65_01825 A6F65_01841 SM00382 ATPases associated with a variety of cellular activities A6F65_01860 SM00852 Probable molybdopterin binding domain A6F65_01862 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F65_01864 SM00481 DNA polymerase alpha chain like domain A6F65_01866 SM00382 ATPases associated with a variety of cellular activities A6F65_01868 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F65_01868 SM00267 diguanylate cyclase A6F65_01869 SM00487 DEAD-like helicases superfamily A6F65_01869 SM00490 helicase superfamily c-terminal domain A6F65_01871 SM00487 DEAD-like helicases superfamily A6F65_01871 SM00490 helicase superfamily c-terminal domain A6F65_01871 SM00982 A6F65_01871 A6F65_01871 SM01058 CarD-like/TRCF domain A6F65_01872 SM00052 Putative diguanylate phosphodiesterase A6F65_01875 SM00957 SecA DEAD-like domain A6F65_01875 SM00958 SecA preprotein cross-linking domain A6F65_01888 SM00091 PAS domain A6F65_01888 SM00387 Histidine kinase-like ATPases A6F65_01888 SM00388 His Kinase A (phosphoacceptor) domain A6F65_01889 SM00996 S-adenosyl-L-homocysteine hydrolase A6F65_01889 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A6F65_01895 SM00155 Phospholipase D. Active site motifs. A6F65_01912 SM00358 Double-stranded RNA binding motif A6F65_01912 SM00535 Ribonuclease III family A6F65_01915 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A6F65_01915 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A6F65_01915 SM00493 A6F65_01915 A6F65_01921 SM01207 A6F65_01921 A6F65_01924 SM00052 Putative diguanylate phosphodiesterase A6F65_01924 SM00267 diguanylate cyclase A6F65_01930 SM00448 cheY-homologous receiver domain A6F65_01938 SM00825 Beta-ketoacyl synthase A6F65_01939 SM00823 Phosphopantetheine attachment site A6F65_01943 SM00341 Helicase and RNase D C-terminal A6F65_01943 SM00474 3'-5' exonuclease A6F65_01951 SM00052 Putative diguanylate phosphodiesterase A6F65_01951 SM00267 diguanylate cyclase A6F65_01953 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F65_01954 SM00382 ATPases associated with a variety of cellular activities A6F65_01954 SM00962 SRP54-type protein, GTPase domain A6F65_01954 SM00963 SRP54-type protein, helical bundle domain A6F65_01957 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A6F65_01959 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F65_01963 SM00935 Outer membrane protein (OmpH-like) A6F65_01978 SM00967 RNA 2'-O ribose methyltransferase substrate binding A6F65_01980 SM00411 bacterial (prokaryotic) histone like domain A6F65_01981 SM00382 ATPases associated with a variety of cellular activities A6F65_01981 SM00464 Found in ATP-dependent protease La (LON) A6F65_01984 SM00382 ATPases associated with a variety of cellular activities A6F65_01986 SM00487 DEAD-like helicases superfamily A6F65_01986 SM00490 helicase superfamily c-terminal domain A6F65_01986 SM00847 Helicase associated domain (HA2) Add an annotation A6F65_01988 SM00830 Chorismate mutase type II A6F65_01989 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F65_01989 SM00091 PAS domain A6F65_01989 SM00911 HWE histidine kinase A6F65_01992 SM00387 Histidine kinase-like ATPases A6F65_01993 SM00448 cheY-homologous receiver domain A6F65_01993 SM00862 Transcriptional regulatory protein, C terminal A6F65_01996 SM00382 ATPases associated with a variety of cellular activities A6F65_01998 SM00421 helix_turn_helix, Lux Regulon A6F65_02002 SM00530 Helix-turn-helix XRE-family like proteins A6F65_02006 SM01323 A6F65_02006 A6F65_02011 SM00878 Biotin carboxylase C-terminal domain A6F65_02014 SM00344 helix_turn_helix ASNC type A6F65_02015 SM00388 His Kinase A (phosphoacceptor) domain A6F65_02024 SM00382 ATPases associated with a variety of cellular activities A6F65_02029 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F65_02032 SM00491 A6F65_02032 A6F65_02034 SM00422 helix_turn_helix, mercury resistance A6F65_02035 SM00411 bacterial (prokaryotic) histone like domain A6F65_02040 SM00849 Metallo-beta-lactamase superfamily A6F65_02041 SM00506 Appr-1"-p processing enzyme A6F65_02053 SM00487 DEAD-like helicases superfamily A6F65_02053 SM00490 helicase superfamily c-terminal domain A6F65_02054 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A6F65_02057 SM01018 B12 binding domain A6F65_02065 SM00564 beta-propeller repeat A6F65_02085 SM01211 A6F65_02085 A6F65_02086 SM00052 Putative diguanylate phosphodiesterase A6F65_02086 SM00267 diguanylate cyclase A6F65_02098 SM00562 A6F65_02098 A6F65_02105 SM00650 Ribosomal RNA adenine dimethylases A6F65_02130 SM00822 A6F65_02130 A6F65_02132 SM00822 A6F65_02132 A6F65_02139 SM00347 helix_turn_helix multiple antibiotic resistance protein A6F65_02139 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A6F65_02142 SM01092 CO dehydrogenase flavoprotein C-terminal domain A6F65_02143 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A6F65_02146 SM00564 beta-propeller repeat A6F65_02156 SM00822 A6F65_02156 A6F65_02157 SM00822 A6F65_02157 A6F65_02165 SM00318 Staphylococcal nuclease homologues A6F65_02165 SM00894 Excalibur calcium-binding domain A6F65_02173 SM00992 Hemimethylated DNA-binding protein YccV like A6F65_02178 SM00829 Enoylreductase A6F65_02179 SM00829 Enoylreductase A6F65_02181 SM00316 Ribosomal protein S1-like RNA-binding domain A6F65_02181 SM00322 K homology RNA-binding domain A6F65_02182 SM01387 A6F65_02182 A6F65_02193 SM00316 Ribosomal protein S1-like RNA-binding domain A6F65_02193 SM00322 K homology RNA-binding domain A6F65_02198 SM00382 ATPases associated with a variety of cellular activities A6F65_02222 SM00382 ATPases associated with a variety of cellular activities A6F65_02224 SM00382 ATPases associated with a variety of cellular activities A6F65_02229 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A6F65_02232 SM00382 ATPases associated with a variety of cellular activities A6F65_02235 SM00984 UDP binding domain A6F65_02238 SM00450 Rhodanese Homology Domain A6F65_02248 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A6F65_02255 SM00864 Tubulin/FtsZ family, GTPase domain A6F65_02255 SM00865 Tubulin/FtsZ family, C-terminal domain A6F65_02256 SM00842 Cell division protein FtsA A6F65_02275 SM00478 endonuclease III A6F65_02280 SM00382 ATPases associated with a variety of cellular activities A6F65_02286 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6F65_02287 SM00938 Nitrogen regulatory protein P-II A6F65_02288 SM01230 A6F65_02288 A6F65_02290 SM00530 Helix-turn-helix XRE-family like proteins A6F65_02293 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. A6F65_02306 SM00836 DALR anticodon binding domain A6F65_02306 SM01016 Arginyl tRNA synthetase N terminal dom A6F65_02315 SM00858 A6F65_02315 A6F65_02321 SM00347 helix_turn_helix multiple antibiotic resistance protein A6F65_02325 SM00382 ATPases associated with a variety of cellular activities A6F65_02325 SM01086 C-terminal, D2-small domain, of ClpB protein A6F65_02326 SM00530 Helix-turn-helix XRE-family like proteins A6F65_02328 SM00382 ATPases associated with a variety of cellular activities A6F65_02332 SM00845 GatB domain A6F65_02337 SM00100 Cyclic nucleotide-monophosphate binding domain A6F65_02348 SM00382 ATPases associated with a variety of cellular activities A6F65_02363 SM00644 A6F65_02363 A6F65_02365 SM00232 JAB/MPN domain A6F65_02372 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. A6F65_02373 SM00028 Tetratricopeptide repeats A6F65_02374 SM00347 helix_turn_helix multiple antibiotic resistance protein A6F65_02376 SM00382 ATPases associated with a variety of cellular activities A6F65_02376 SM00994 ClpX C4-type zinc finger A6F65_02376 SM01086 C-terminal, D2-small domain, of ClpB protein A6F65_02392 SM00671 Sel1-like repeats. A6F65_02395 SM00028 Tetratricopeptide repeats A6F65_02400 SM00419 helix_turn_helix, cAMP Regulatory protein A6F65_02420 SM00487 DEAD-like helicases superfamily A6F65_02426 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A6F65_02426 SM00869 Autotransporter beta-domain A6F65_02427 SM00421 helix_turn_helix, Lux Regulon A6F65_02427 SM00448 cheY-homologous receiver domain A6F65_02428 SM00387 Histidine kinase-like ATPases A6F65_02432 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain A6F65_02432 SM01080 A6F65_02432 A6F65_02438 SM00257 Lysin motif A6F65_02441 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F65_02442 SM00421 helix_turn_helix, Lux Regulon A6F65_02443 SM00421 helix_turn_helix, Lux Regulon A6F65_02445 SM00460 Transglutaminase/protease-like homologues A6F65_02455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F65_02460 SM00849 Metallo-beta-lactamase superfamily A6F65_02465 SM01021 Bacteriorhodopsin-like protein A6F65_02482 SM00382 ATPases associated with a variety of cellular activities A6F65_02489 SM00862 Transcriptional regulatory protein, C terminal A6F65_02499 SM00448 cheY-homologous receiver domain A6F65_02500 SM00448 cheY-homologous receiver domain A6F65_02501 SM00911 HWE histidine kinase A6F65_02501 SM01079 A6F65_02501 A6F65_02517 SM00382 ATPases associated with a variety of cellular activities A6F65_02518 SM00327 von Willebrand factor (vWF) type A domain A6F65_02537 SM00450 Rhodanese Homology Domain A6F65_02538 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F65_02540 SM00382 ATPases associated with a variety of cellular activities A6F65_02541 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6F65_02547 SM00925 MltA specific insert domain A6F65_02548 SM00978 A6F65_02548 A6F65_02553 SM00862 Transcriptional regulatory protein, C terminal A6F65_02562 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A6F65_02562 SM01232 A6F65_02562