EP12_00005 PF00308 Bacterial dnaA protein EP12_00005 PF08299 Bacterial dnaA protein helix-turn-helix EP12_00005 PF11638 DnaA N-terminal domain EP12_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain EP12_00010 PF02767 DNA polymerase III beta subunit, central domain EP12_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain EP12_00015 PF02463 RecF/RecN/SMC N terminal domain EP12_00030 PF02092 EP12_00030 EP12_00030 PF05746 DALR anticodon binding domain EP12_00035 PF02091 Glycyl-tRNA synthetase alpha subunit EP12_00040 PF03352 Methyladenine glycosylase EP12_00045 PF10675 EP12_00045 EP12_00050 PF04220 EP12_00050 EP12_00055 PF13489 Methyltransferase domain EP12_00060 PF00034 Cytochrome c EP12_00065 PF01926 50S ribosome-binding GTPase EP12_00070 PF00476 DNA polymerase family A EP12_00070 PF01367 5'-3' exonuclease, C-terminal SAM fold EP12_00070 PF01612 3'-5' exonuclease EP12_00070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EP12_00080 PF02386 Cation transport protein EP12_00090 PF01029 NusB family EP12_00090 PF01189 NOL1/NOP2/sun family EP12_00095 PF00551 Formyl transferase EP12_00095 PF02911 Formyl transferase, C-terminal domain EP12_00100 PF01327 Polypeptide deformylase EP12_00105 PF01476 LysM domain EP12_00110 PF02481 DNA recombination-mediator protein A EP12_00115 PF04361 EP12_00115 EP12_00120 PF01396 EP12_00120 EP12_00125 PF01300 Telomere recombination EP12_00130 PF01218 Coproporphyrinogen III oxidase EP12_00140 PF01152 Bacterial-like globin EP12_00145 PF01488 Shikimate / quinate 5-dehydrogenase EP12_00145 PF08501 Shikimate dehydrogenase substrate binding domain EP12_00150 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_00185 PF10978 EP12_00185 EP12_00190 PF09411 Lipid A 3-O-deacylase (PagL) EP12_00195 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_00205 PF01336 OB-fold nucleic acid binding domain EP12_00205 PF02811 PHP domain EP12_00205 PF07733 Bacterial DNA polymerase III alpha subunit EP12_00205 PF14579 Helix-hairpin-helix motif EP12_00225 PF05960 Bacterial protein of unknown function (DUF885) EP12_00230 PF08850 EP12_00230 EP12_00235 PF02225 PA domain EP12_00235 PF04389 Peptidase family M28 EP12_00240 PF01467 Cytidylyltransferase EP12_00250 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EP12_00260 PF02441 Flavoprotein EP12_00260 PF04127 DNA / pantothenate metabolism flavoprotein EP12_00265 PF04002 RadC-like JAB domain EP12_00275 PF11102 Group 4 capsule polysaccharide formation lipoprotein gfcB EP12_00280 PF06251 Capsule biosynthesis GfcC EP12_00285 PF06082 EP12_00285 EP12_00290 PF00830 Ribosomal L28 family EP12_00295 PF00471 Ribosomal protein L33 EP12_00305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EP12_00305 PF06827 Zinc finger found in FPG and IleRS EP12_00305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EP12_00315 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family EP12_00320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EP12_00325 PF12849 PBP superfamily domain EP12_00335 PF00563 EAL domain EP12_00335 PF00990 GGDEF domain EP12_00335 PF14827 Sensory domain of two-component sensor kinase EP12_00340 PF00155 Aminotransferase class I and II EP12_00345 PF00107 Zinc-binding dehydrogenase EP12_00345 PF08240 Alcohol dehydrogenase GroES-like domain EP12_00350 PF00581 Rhodanese-like domain EP12_00355 PF01694 Rhomboid family EP12_00355 PF12122 Protein of unknown function (DUF3582) EP12_00360 PF03748 EP12_00360 EP12_00365 PF04345 Chorismate lyase EP12_00370 PF01040 UbiA prenyltransferase family EP12_00375 PF04380 EP12_00375 EP12_00380 PF00580 UvrD/REP helicase N-terminal domain EP12_00380 PF13361 UvrD-like helicase C-terminal domain EP12_00385 PF00563 EAL domain EP12_00385 PF00990 GGDEF domain EP12_00385 PF13185 GAF domain EP12_00390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EP12_00425 PF00271 Helicase conserved C-terminal domain EP12_00425 PF04851 Type III restriction enzyme, res subunit EP12_00425 PF11907 EP12_00425 EP12_00425 PF13091 PLD-like domain EP12_00430 PF08241 Methyltransferase domain EP12_00440 PF00005 ABC transporter EP12_00440 PF12698 ABC-2 family transporter protein EP12_00445 PF12698 ABC-2 family transporter protein EP12_00450 PF00593 TonB dependent receptor EP12_00450 PF07715 TonB-dependent Receptor Plug Domain EP12_00455 PF00593 TonB dependent receptor EP12_00455 PF07715 TonB-dependent Receptor Plug Domain EP12_00460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_00460 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_00460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_00465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_00465 PF03466 LysR substrate binding domain EP12_00470 PF00753 Metallo-beta-lactamase superfamily EP12_00475 PF04317 EP12_00475 EP12_00480 PF05128 EP12_00480 EP12_00485 PF06738 EP12_00485 EP12_00485 PF12821 EP12_00485 EP12_00490 PF04055 Radical SAM superfamily EP12_00490 PF06968 Biotin and Thiamin Synthesis associated domain EP12_00495 PF05690 Thiazole biosynthesis protein ThiG EP12_00500 PF02597 ThiS family EP12_00505 PF00899 ThiF family EP12_00510 PF02581 Thiamine monophosphate synthase/TENI EP12_00510 PF08543 Phosphomethylpyrimidine kinase EP12_00515 PF01964 ThiC family EP12_00515 PF13667 ThiC-associated domain EP12_00520 PF00593 TonB dependent receptor EP12_00520 PF07715 TonB-dependent Receptor Plug Domain EP12_00525 PF00296 Luciferase-like monooxygenase EP12_00530 PF03807 NADP oxidoreductase coenzyme F420-dependent EP12_00535 PF01996 F420-0:Gamma-glutamyl ligase EP12_00555 PF04055 Radical SAM superfamily EP12_00570 PF00440 Bacterial regulatory proteins, tetR family EP12_00570 PF08362 YcdC-like protein, C-terminal region EP12_00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_00575 PF03466 LysR substrate binding domain EP12_00580 PF00202 Aminotransferase class-III EP12_00585 PF00171 Aldehyde dehydrogenase family EP12_00595 PF01546 Peptidase family M20/M25/M40 EP12_00595 PF07687 Peptidase dimerisation domain EP12_00600 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EP12_00615 PF04375 EP12_00615 EP12_00620 PF02602 Uroporphyrinogen-III synthase HemD EP12_00625 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EP12_00625 PF03900 Porphobilinogen deaminase, C-terminal domain EP12_00630 PF00990 GGDEF domain EP12_00640 PF00625 Guanylate kinase EP12_00645 PF01192 RNA polymerase Rpb6 EP12_00650 PF02824 TGS domain EP12_00650 PF04607 Region found in RelA / SpoT proteins EP12_00650 PF13291 ACT domain EP12_00650 PF13328 HD domain EP12_00655 PF01042 Endoribonuclease L-PSP EP12_00660 PF00588 SpoU rRNA Methylase family EP12_00660 PF12105 SpoU, rRNA methylase, C-terminal EP12_00665 PF00270 DEAD/DEAH box helicase EP12_00665 PF00271 Helicase conserved C-terminal domain EP12_00665 PF17191 EP12_00665 EP12_00675 PF08534 Redoxin EP12_00690 PF13343 Bacterial extracellular solute-binding protein EP12_00695 PF00528 Binding-protein-dependent transport system inner membrane component EP12_00700 PF00005 ABC transporter EP12_00700 PF08402 TOBE domain EP12_00705 PF00924 Mechanosensitive ion channel EP12_00710 PF03486 HI0933-like protein EP12_00720 PF00593 TonB dependent receptor EP12_00720 PF07715 TonB-dependent Receptor Plug Domain EP12_00725 PF03965 Penicillinase repressor EP12_00730 PF05569 BlaR1 peptidase M56 EP12_00735 PF00072 Response regulator receiver domain EP12_00735 PF00196 Bacterial regulatory proteins, luxR family EP12_00740 PF13469 Sulfotransferase family EP12_00745 PF00593 TonB dependent receptor EP12_00745 PF07715 TonB-dependent Receptor Plug Domain EP12_00750 PF00491 Arginase family EP12_00755 PF13145 PPIC-type PPIASE domain EP12_00765 PF00491 Arginase family EP12_00770 PF00491 Arginase family EP12_00775 PF00072 Response regulator receiver domain EP12_00775 PF00512 His Kinase A (phospho-acceptor) domain EP12_00775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_00780 PF13433 Periplasmic binding protein domain EP12_00785 PF02653 EP12_00785 EP12_00790 PF02653 EP12_00790 EP12_00795 PF00005 ABC transporter EP12_00795 PF12399 Branched-chain amino acid ATP-binding cassette transporter EP12_00800 PF00005 ABC transporter EP12_00805 PF01774 UreD urease accessory protein EP12_00810 PF00547 Urease, gamma subunit EP12_00815 PF00699 Urease beta subunit EP12_00820 PF00449 Urease alpha-subunit, N-terminal domain EP12_00820 PF01979 Amidohydrolase family EP12_00825 PF02814 UreE urease accessory protein, N-terminal domain EP12_00825 PF05194 UreE urease accessory protein, C-terminal domain EP12_00830 PF01730 UreF EP12_00835 PF02492 CobW/HypB/UreG, nucleotide-binding domain EP12_00850 PF00990 GGDEF domain EP12_00850 PF07695 EP12_00850 EP12_00855 PF00246 Zinc carboxypeptidase EP12_00860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_00860 PF03466 LysR substrate binding domain EP12_00865 PF01810 EP12_00865 EP12_00870 PF07386 EP12_00870 EP12_00875 PF12339 EP12_00875 EP12_00880 PF16576 EP12_00880 EP12_00885 PF00873 AcrB/AcrD/AcrF family EP12_00890 PF05728 Uncharacterised protein family (UPF0227) EP12_00895 PF00583 Acetyltransferase (GNAT) family EP12_00895 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EP12_00895 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EP12_00900 PF00850 Histone deacetylase domain EP12_00905 PF00462 Glutaredoxin EP12_00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_00930 PF00925 GTP cyclohydrolase II EP12_00935 PF00563 EAL domain EP12_00935 PF00990 GGDEF domain EP12_00935 PF07696 7TMR-DISM extracellular 2 EP12_00935 PF13188 PAS domain EP12_00945 PF00043 Glutathione S-transferase, C-terminal domain EP12_00945 PF02798 Glutathione S-transferase, N-terminal domain EP12_00950 PF00270 DEAD/DEAH box helicase EP12_00950 PF00271 Helicase conserved C-terminal domain EP12_00950 PF00570 HRDC domain EP12_00950 PF09382 RQC domain EP12_00950 PF16124 EP12_00950 EP12_00955 PF03061 Thioesterase superfamily EP12_00960 PF01769 Divalent cation transporter EP12_00960 PF03448 MgtE intracellular N domain EP12_00965 PF00892 EamA-like transporter family EP12_00970 PF00072 Response regulator receiver domain EP12_00970 PF00990 GGDEF domain EP12_00975 PF00580 UvrD/REP helicase N-terminal domain EP12_00975 PF13361 UvrD-like helicase C-terminal domain EP12_00980 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_00980 PF06426 Serine acetyltransferase, N-terminal EP12_00985 PF13419 Haloacid dehalogenase-like hydrolase EP12_00990 PF00589 Phage integrase family EP12_00990 PF02899 Phage integrase, N-terminal SAM-like domain EP12_00995 PF04340 Protein of unknown function, DUF484 EP12_01005 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EP12_01005 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EP12_01010 PF13627 EP12_01010 EP12_01015 PF13528 Glycosyl transferase family 1 EP12_01020 PF01569 PAP2 superfamily EP12_01025 PF03737 Demethylmenaquinone methyltransferase EP12_01030 PF02265 S1/P1 Nuclease EP12_01035 PF02441 Flavoprotein EP12_01040 PF01225 Mur ligase family, catalytic domain EP12_01040 PF02875 Mur ligase family, glutamate ligase domain EP12_01040 PF08245 Mur ligase middle domain EP12_01045 PF00316 Fructose-1-6-bisphosphatase EP12_01050 PF00719 Inorganic pyrophosphatase EP12_01055 PF11736 Protein of unknown function (DUF3299) EP12_01060 PF13279 Thioesterase-like superfamily EP12_01070 PF00012 Hsp70 protein EP12_01075 PF00005 ABC transporter EP12_01080 PF07690 Major Facilitator Superfamily EP12_01085 PF13419 Haloacid dehalogenase-like hydrolase EP12_01100 PF00356 Bacterial regulatory proteins, lacI family EP12_01100 PF13377 Periplasmic binding protein-like domain EP12_01105 PF01263 Aldose 1-epimerase EP12_01110 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EP12_01110 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EP12_01115 PF00288 GHMP kinases N terminal domain EP12_01115 PF08544 GHMP kinases C terminal EP12_01115 PF10509 Galactokinase galactose-binding signature EP12_01120 PF00474 Sodium:solute symporter family EP12_01130 PF00589 Phage integrase family EP12_01150 PF00665 Integrase core domain EP12_01170 PF10544 EP12_01170 EP12_01170 PF13250 EP12_01170 EP12_01175 PF00239 Resolvase, N terminal domain EP12_01175 PF02796 Helix-turn-helix domain of resolvase EP12_01185 PF13604 AAA domain EP12_01185 PF14490 Helix-hairpin-helix containing domain EP12_01190 PF13538 UvrD-like helicase C-terminal domain EP12_01195 PF03403 Platelet-activating factor acetylhydrolase, isoform II EP12_01205 PF02065 Melibiase EP12_01205 PF16874 EP12_01205 EP12_01205 PF16875 EP12_01205 EP12_01210 PF07277 EP12_01210 EP12_01215 PF04820 Tryptophan halogenase EP12_01220 PF00474 Sodium:solute symporter family EP12_01230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EP12_01230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EP12_01255 PF06723 MreB/Mbl protein EP12_01260 PF04085 rod shape-determining protein MreC EP12_01265 PF04093 EP12_01265 EP12_01270 PF02545 Maf-like protein EP12_01275 PF00575 S1 RNA binding domain EP12_01275 PF10150 Ribonuclease E/G family EP12_01290 PF01523 Putative modulator of DNA gyrase EP12_01295 PF04751 Protein of unknown function (DUF615) EP12_01300 PF01523 Putative modulator of DNA gyrase EP12_01305 PF12833 Helix-turn-helix domain EP12_01315 PF00072 Response regulator receiver domain EP12_01315 PF00486 Transcriptional regulatory protein, C terminal EP12_01320 PF00512 His Kinase A (phospho-acceptor) domain EP12_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_01335 PF02390 Putative methyltransferase EP12_01340 PF00561 alpha/beta hydrolase fold EP12_01345 PF00633 Helix-hairpin-helix motif EP12_01345 PF00730 HhH-GPD superfamily base excision DNA repair protein EP12_01345 PF10576 Iron-sulfur binding domain of endonuclease III EP12_01345 PF14815 NUDIX domain EP12_01350 PF04362 Bacterial Fe(2+) trafficking EP12_01360 PF11185 EP12_01360 EP12_01365 PF08937 MTH538 TIR-like domain (DUF1863) EP12_01370 PF13289 EP12_01370 EP12_01375 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EP12_01375 PF04851 Type III restriction enzyme, res subunit EP12_01375 PF11867 EP12_01375 EP12_01395 PF02384 N-6 DNA Methylase EP12_01395 PF12161 HsdM N-terminal domain EP12_01405 PF13280 EP12_01405 EP12_01410 PF04250 EP12_01410 EP12_01415 PF01396 EP12_01415 EP12_01415 PF04471 Restriction endonuclease EP12_01420 PF01936 NYN domain EP12_01420 PF12872 OST-HTH/LOTUS domain EP12_01425 PF01693 Caulimovirus viroplasmin EP12_01430 PF10980 Protein of unknown function (DUF2787) EP12_01440 PF00004 ATPase family associated with various cellular activities (AAA) EP12_01445 PF00589 Phage integrase family EP12_01475 PF02321 Outer membrane efflux protein EP12_01480 PF13533 Biotin-lipoyl like EP12_01480 PF16576 EP12_01480 EP12_01485 PF00873 AcrB/AcrD/AcrF family EP12_01490 PF01545 Cation efflux family EP12_01495 PF13127 EP12_01495 EP12_01505 PF00884 Sulfatase EP12_01505 PF08019 EP12_01505 EP12_01510 PF13231 EP12_01510 EP12_01515 PF09335 EP12_01515 EP12_01520 PF00535 Glycosyl transferase family 2 EP12_01530 PF00072 Response regulator receiver domain EP12_01530 PF00486 Transcriptional regulatory protein, C terminal EP12_01540 PF04214 EP12_01540 EP12_01550 PF05425 EP12_01550 EP12_01555 PF13474 SnoaL-like domain EP12_01560 PF14534 Domain of unknown function (DUF4440) EP12_01575 PF00376 MerR family regulatory protein EP12_01575 PF09278 MerR, DNA binding EP12_01580 PF00122 E1-E2 ATPase EP12_01580 PF00403 Heavy-metal-associated domain EP12_01580 PF00702 haloacid dehalogenase-like hydrolase EP12_01585 PF13473 Cupredoxin-like domain EP12_01590 PF11666 EP12_01590 EP12_01595 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family EP12_01620 PF13520 Amino acid permease EP12_01625 PF05275 EP12_01625 EP12_01630 PF00394 Multicopper oxidase EP12_01630 PF07731 Multicopper oxidase EP12_01630 PF07732 Multicopper oxidase EP12_01645 PF03713 Domain of unknown function (DUF305) EP12_01650 PF07885 Ion channel EP12_01655 PF00589 Phage integrase family EP12_01655 PF13102 Phage integrase SAM-like domain EP12_01695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_01705 PF01266 FAD dependent oxidoreductase EP12_01710 PF00593 TonB dependent receptor EP12_01710 PF07715 TonB-dependent Receptor Plug Domain EP12_01715 PF03929 EP12_01715 EP12_01720 PF00512 His Kinase A (phospho-acceptor) domain EP12_01720 PF00672 HAMP domain EP12_01720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_01720 PF16750 EP12_01720 EP12_01725 PF00072 Response regulator receiver domain EP12_01725 PF00486 Transcriptional regulatory protein, C terminal EP12_01735 PF07690 Major Facilitator Superfamily EP12_01740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_01745 PF00072 Response regulator receiver domain EP12_01750 PF01584 CheW-like domain EP12_01750 PF01627 Hpt domain EP12_01750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_01750 PF02895 Signal transducing histidine kinase, homodimeric domain EP12_01755 PF01584 CheW-like domain EP12_01760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_01760 PF08447 PAS fold EP12_01765 PF01739 CheR methyltransferase, SAM binding domain EP12_01765 PF03705 CheR methyltransferase, all-alpha domain EP12_01770 PF03975 CheD chemotactic sensory transduction EP12_01775 PF00072 Response regulator receiver domain EP12_01775 PF01339 CheB methylesterase EP12_01785 PF13419 Haloacid dehalogenase-like hydrolase EP12_01805 PF01258 Prokaryotic dksA/traR C4-type zinc finger EP12_01810 PF11872 EP12_01810 EP12_01815 PF01261 Xylose isomerase-like TIM barrel EP12_01830 PF01261 Xylose isomerase-like TIM barrel EP12_01830 PF07582 AP endonuclease family 2 C terminus EP12_01840 PF01261 Xylose isomerase-like TIM barrel EP12_01845 PF00732 GMC oxidoreductase EP12_01845 PF05199 GMC oxidoreductase EP12_01850 PF13618 EP12_01850 EP12_01855 PF06439 Domain of Unknown Function (DUF1080) EP12_01865 PF00248 Aldo/keto reductase family EP12_01870 PF08212 Lipocalin-like domain EP12_01875 PF03831 PhnA protein EP12_01885 PF00270 DEAD/DEAH box helicase EP12_01885 PF00271 Helicase conserved C-terminal domain EP12_01885 PF03880 DbpA RNA binding domain EP12_01890 PF10000 ACT domain EP12_01890 PF13840 ACT domain EP12_01895 PF01431 Peptidase family M13 EP12_01895 PF05649 Peptidase family M13 EP12_01900 PF03737 Demethylmenaquinone methyltransferase EP12_01905 PF00080 Copper/zinc superoxide dismutase (SODC) EP12_01910 PF00563 EAL domain EP12_01910 PF08668 HDOD domain EP12_01915 PF00005 ABC transporter EP12_01915 PF00664 ABC transporter transmembrane region EP12_01925 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EP12_01930 PF00467 KOW motif EP12_01930 PF02357 Transcription termination factor nusG EP12_01945 PF00298 Ribosomal protein L11, RNA binding domain EP12_01945 PF03946 Ribosomal protein L11, N-terminal domain EP12_01950 PF00687 Ribosomal protein L1p/L10e family EP12_01955 PF00466 Ribosomal protein L10 EP12_01960 PF00542 Ribosomal protein L7/L12 C-terminal domain EP12_01960 PF16320 EP12_01960 EP12_01965 PF00562 RNA polymerase Rpb2, domain 6 EP12_01965 PF04560 RNA polymerase Rpb2, domain 7 EP12_01965 PF04561 RNA polymerase Rpb2, domain 2 EP12_01965 PF04563 RNA polymerase beta subunit EP12_01965 PF04565 RNA polymerase Rpb2, domain 3 EP12_01965 PF10385 RNA polymerase beta subunit external 1 domain EP12_01970 PF00623 RNA polymerase Rpb1, domain 2 EP12_01970 PF04983 RNA polymerase Rpb1, domain 3 EP12_01970 PF04997 RNA polymerase Rpb1, domain 1 EP12_01970 PF04998 RNA polymerase Rpb1, domain 5 EP12_01970 PF05000 RNA polymerase Rpb1, domain 4 EP12_01975 PF00164 Ribosomal protein S12/S23 EP12_01980 PF00177 Ribosomal protein S7p/S5e EP12_02020 PF03703 EP12_02020 EP12_02025 PF00300 Histidine phosphatase superfamily (branch 1) EP12_02030 PF00330 Aconitase family (aconitate hydratase) EP12_02030 PF00694 Aconitase C-terminal domain EP12_02035 PF00437 Type II/IV secretion system protein EP12_02035 PF01590 GAF domain EP12_02035 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EP12_02040 PF00338 Ribosomal protein S10p/S20e EP12_02045 PF00297 Ribosomal protein L3 EP12_02050 PF00573 Ribosomal protein L4/L1 family EP12_02055 PF00276 Ribosomal protein L23 EP12_02060 PF00181 Ribosomal Proteins L2, RNA binding domain EP12_02060 PF03947 Ribosomal Proteins L2, C-terminal domain EP12_02065 PF00203 Ribosomal protein S19 EP12_02070 PF00237 Ribosomal protein L22p/L17e EP12_02075 PF00189 Ribosomal protein S3, C-terminal domain EP12_02075 PF07650 KH domain EP12_02080 PF00252 Ribosomal protein L16p/L10e EP12_02085 PF00831 Ribosomal L29 protein EP12_02090 PF00366 Ribosomal protein S17 EP12_02095 PF00534 Glycosyl transferases group 1 EP12_02095 PF13477 Glycosyl transferase 4-like EP12_02100 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EP12_02110 PF00999 Sodium/hydrogen exchanger family EP12_02110 PF02254 TrkA-N domain EP12_02120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_02120 PF02743 Cache domain EP12_02125 PF01432 Peptidase family M3 EP12_02130 PF10688 EP12_02130 EP12_02140 PF00551 Formyl transferase EP12_02140 PF01842 ACT domain EP12_02145 PF13563 2'-5' RNA ligase superfamily EP12_02170 PF00905 Penicillin binding protein transpeptidase domain EP12_02170 PF00912 Transglycosylase EP12_02170 PF14814 Bifunctional transglycosylase second domain EP12_02190 PF12833 Helix-turn-helix domain EP12_02195 PF00892 EamA-like transporter family EP12_02205 PF00543 Nitrogen regulatory protein P-II EP12_02210 PF00909 Ammonium Transporter Family EP12_02220 PF01019 Gamma-glutamyltranspeptidase EP12_02225 PF04261 Dyp-type peroxidase family EP12_02230 PF00202 Aminotransferase class-III EP12_02240 PF00440 Bacterial regulatory proteins, tetR family EP12_02245 PF00873 AcrB/AcrD/AcrF family EP12_02250 PF11201 EP12_02250 EP12_02260 PF00521 DNA gyrase/topoisomerase IV, subunit A EP12_02260 PF03989 DNA gyrase C-terminal domain, beta-propeller EP12_02265 PF07700 Heme NO binding EP12_02270 PF00563 EAL domain EP12_02270 PF00990 GGDEF domain EP12_02270 PF13426 PAS domain EP12_02275 PF07063 Domain of unknown function (DUF1338) EP12_02285 PF04958 Arginine N-succinyltransferase beta subunit EP12_02290 PF00202 Aminotransferase class-III EP12_02295 PF08668 HDOD domain EP12_02300 PF00117 Glutamine amidotransferase class-I EP12_02305 PF00579 tRNA synthetases class I (W and Y) EP12_02310 PF00834 Ribulose-phosphate 3 epimerase family EP12_02325 PF11174 EP12_02325 EP12_02340 PF01761 3-dehydroquinate synthase EP12_02345 PF01202 Shikimate kinase EP12_02350 PF00263 EP12_02350 EP12_02350 PF03958 Bacterial type II/III secretion system short domain EP12_02355 PF04351 Pilus assembly protein, PilP EP12_02360 PF04350 Pilus assembly protein, PilO EP12_02365 PF05137 EP12_02365 EP12_02370 PF11104 Type IV pilus assembly protein PilM; EP12_02375 PF00905 Penicillin binding protein transpeptidase domain EP12_02375 PF00912 Transglycosylase EP12_02375 PF17092 EP12_02375 EP12_02380 PF00390 Malic enzyme, N-terminal domain EP12_02380 PF03949 Malic enzyme, NAD binding domain EP12_02390 PF02798 Glutathione S-transferase, N-terminal domain EP12_02390 PF13410 Glutathione S-transferase, C-terminal domain EP12_02395 PF00199 Catalase EP12_02395 PF06628 Catalase-related immune-responsive EP12_02405 PF13432 Tetratricopeptide repeat EP12_02405 PF14559 Tetratricopeptide repeat EP12_02410 PF12146 Putative lysophospholipase EP12_02415 PF00563 EAL domain EP12_02415 PF00990 GGDEF domain EP12_02420 PF00583 Acetyltransferase (GNAT) family EP12_02420 PF00696 Amino acid kinase family EP12_02425 PF00206 Lyase EP12_02425 PF14698 Argininosuccinate lyase C-terminal EP12_02430 PF00764 Arginosuccinate synthase EP12_02435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EP12_02435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EP12_02440 PF00696 Amino acid kinase family EP12_02445 PF01118 Semialdehyde dehydrogenase, NAD binding domain EP12_02445 PF02774 Semialdehyde dehydrogenase, dimerisation domain EP12_02450 PF02142 MGS-like domain EP12_02470 PF07813 LTXXQ motif family protein EP12_02475 PF00072 Response regulator receiver domain EP12_02475 PF00486 Transcriptional regulatory protein, C terminal EP12_02485 PF12146 Putative lysophospholipase EP12_02490 PF00588 SpoU rRNA Methylase family EP12_02500 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EP12_02500 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EP12_02505 PF02556 Preprotein translocase subunit SecB EP12_02510 PF00462 Glutaredoxin EP12_02515 PF00581 Rhodanese-like domain EP12_02520 PF01551 Peptidase family M23 EP12_02535 PF03203 EP12_02535 EP12_02540 PF03009 Glycerophosphoryl diester phosphodiesterase family EP12_02545 PF00892 EamA-like transporter family EP12_02550 PF02666 EP12_02550 EP12_02555 PF03193 Protein of unknown function, DUF258 EP12_02560 PF00929 Exonuclease EP12_02585 PF14539 Domain of unknown function (DUF4442) EP12_02590 PF04219 EP12_02590 EP12_02595 PF00205 Thiamine pyrophosphate enzyme, central domain EP12_02595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EP12_02595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EP12_02600 PF10369 Small subunit of acetolactate synthase EP12_02600 PF13710 ACT domain EP12_02610 PF02416 mttA/Hcf106 family EP12_02615 PF02416 mttA/Hcf106 family EP12_02630 PF01026 TatD related DNase EP12_02635 PF00990 GGDEF domain EP12_02635 PF07695 EP12_02635 EP12_02635 PF07696 7TMR-DISM extracellular 2 EP12_02640 PF00490 Delta-aminolevulinic acid dehydratase EP12_02645 PF02541 Ppx/GppA phosphatase family EP12_02650 PF00270 DEAD/DEAH box helicase EP12_02650 PF00271 Helicase conserved C-terminal domain EP12_02655 PF00085 Thioredoxin EP12_02665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EP12_02665 PF07497 Rho termination factor, RNA-binding domain EP12_02665 PF07498 Rho termination factor, N-terminal domain EP12_02670 PF01546 Peptidase family M20/M25/M40 EP12_02670 PF07687 Peptidase dimerisation domain EP12_02675 PF00072 Response regulator receiver domain EP12_02675 PF00512 His Kinase A (phospho-acceptor) domain EP12_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_02675 PF02743 Cache domain EP12_02680 PF06965 Na+/H+ antiporter 1 EP12_02685 PF00731 AIR carboxylase EP12_02690 PF02222 ATP-grasp domain EP12_02705 PF00210 Ferritin-like domain EP12_02720 PF06127 EP12_02720 EP12_02725 PF00085 Thioredoxin EP12_02725 PF14559 Tetratricopeptide repeat EP12_02725 PF14561 Tetratricopeptide repeat EP12_02730 PF00709 Adenylosuccinate synthetase EP12_02735 PF00709 Adenylosuccinate synthetase EP12_02740 PF00171 Aldehyde dehydrogenase family EP12_02745 PF01019 Gamma-glutamyltranspeptidase EP12_02750 PF03553 EP12_02750 EP12_02755 PF00933 Glycosyl hydrolase family 3 N terminal domain EP12_02760 PF00924 Mechanosensitive ion channel EP12_02765 PF07075 Protein of unknown function (DUF1343) EP12_02775 PF00842 Alanine racemase, C-terminal domain EP12_02775 PF01168 Alanine racemase, N-terminal domain EP12_02780 PF02588 EP12_02780 EP12_02790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_02800 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_02805 PF13372 Alginate export EP12_02830 PF03358 NADPH-dependent FMN reductase EP12_02835 PF13302 Acetyltransferase (GNAT) domain EP12_02845 PF13474 SnoaL-like domain EP12_02855 PF13420 Acetyltransferase (GNAT) domain EP12_02865 PF09932 EP12_02865 EP12_02870 PF04828 Glutathione-dependent formaldehyde-activating enzyme EP12_02875 PF13673 Acetyltransferase (GNAT) domain EP12_02910 PF03693 Uncharacterised protein family (UPF0156) EP12_02915 PF05016 Plasmid stabilisation system protein EP12_02920 PF01979 Amidohydrolase family EP12_02925 PF11903 EP12_02925 EP12_02930 PF15781 EP12_02930 EP12_02950 PF00589 Phage integrase family EP12_02950 PF13495 Phage integrase, N-terminal SAM-like domain EP12_02955 PF00108 Thiolase, N-terminal domain EP12_02955 PF02803 Thiolase, C-terminal domain EP12_02960 PF00378 Enoyl-CoA hydratase/isomerase family EP12_02960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EP12_02960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EP12_02975 PF00557 Metallopeptidase family M24 EP12_02985 PF00348 Polyprenyl synthetase EP12_02990 PF00829 Ribosomal prokaryotic L21 protein EP12_02995 PF01016 Ribosomal L27 protein EP12_03000 PF01018 GTP1/OBG EP12_03000 PF01926 50S ribosome-binding GTPase EP12_03005 PF00717 Peptidase S24-like EP12_03010 PF09055 Nickel-containing superoxide dismutase EP12_03030 PF00186 Dihydrofolate reductase EP12_03035 PF00140 Sigma-70 factor, region 1 EP12_03035 PF04539 Sigma-70 region 3 EP12_03035 PF04542 Sigma-70 region 2 EP12_03035 PF04545 Sigma-70, region 4 EP12_03040 PF01476 LysM domain EP12_03040 PF01551 Peptidase family M23 EP12_03045 PF09335 EP12_03045 EP12_03050 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) EP12_03055 PF01975 Survival protein SurE EP12_03060 PF01142 tRNA pseudouridine synthase D (TruD) EP12_03065 PF02542 YgbB family EP12_03070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EP12_03075 PF04977 Septum formation initiator EP12_03085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_03085 PF00672 HAMP domain EP12_03085 PF17200 EP12_03085 EP12_03090 PF00171 Aldehyde dehydrogenase family EP12_03090 PF01619 Proline dehydrogenase EP12_03090 PF14850 DNA-binding domain of Proline dehydrogenase EP12_03095 PF02321 Outer membrane efflux protein EP12_03100 PF13437 HlyD family secretion protein EP12_03100 PF13533 Biotin-lipoyl like EP12_03110 PF00072 Response regulator receiver domain EP12_03110 PF00486 Transcriptional regulatory protein, C terminal EP12_03115 PF00512 His Kinase A (phospho-acceptor) domain EP12_03120 PF08239 Bacterial SH3 domain EP12_03140 PF00293 NUDIX domain EP12_03145 PF00391 PEP-utilising enzyme, mobile domain EP12_03145 PF01590 GAF domain EP12_03145 PF02896 PEP-utilising enzyme, TIM barrel domain EP12_03145 PF05524 PEP-utilising enzyme, N-terminal EP12_03150 PF01925 EP12_03150 EP12_03155 PF01790 EP12_03155 EP12_03165 PF00072 Response regulator receiver domain EP12_03175 PF00072 Response regulator receiver domain EP12_03175 PF00512 His Kinase A (phospho-acceptor) domain EP12_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_03180 PF07690 Major Facilitator Superfamily EP12_03190 PF12048 EP12_03190 EP12_03195 PF00849 RNA pseudouridylate synthase EP12_03220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EP12_03220 PF10414 Sirohaem synthase dimerisation region EP12_03220 PF13241 Putative NAD(P)-binding EP12_03225 PF00270 DEAD/DEAH box helicase EP12_03225 PF00271 Helicase conserved C-terminal domain EP12_03225 PF03880 DbpA RNA binding domain EP12_03230 PF13414 TPR repeat EP12_03230 PF13432 Tetratricopeptide repeat EP12_03230 PF14559 Tetratricopeptide repeat EP12_03235 PF00520 Ion transport protein EP12_03245 PF02321 Outer membrane efflux protein EP12_03250 PF00293 NUDIX domain EP12_03255 PF06853 EP12_03255 EP12_03260 PF00149 Calcineurin-like phosphoesterase EP12_03265 PF05728 Uncharacterised protein family (UPF0227) EP12_03275 PF00563 EAL domain EP12_03275 PF00990 GGDEF domain EP12_03275 PF01339 CheB methylesterase EP12_03275 PF01739 CheR methyltransferase, SAM binding domain EP12_03275 PF03705 CheR methyltransferase, all-alpha domain EP12_03275 PF08448 PAS fold EP12_03275 PF13426 PAS domain EP12_03280 PF00360 Phytochrome region EP12_03280 PF01590 GAF domain EP12_03280 PF08446 PAS fold EP12_03285 PF13419 Haloacid dehalogenase-like hydrolase EP12_03305 PF04055 Radical SAM superfamily EP12_03305 PF13353 4Fe-4S single cluster domain EP12_03310 PF01132 Elongation factor P (EF-P) OB domain EP12_03310 PF08207 Elongation factor P (EF-P) KOW-like domain EP12_03310 PF09285 Elongation factor P, C-terminal EP12_03320 PF00593 TonB dependent receptor EP12_03320 PF07715 TonB-dependent Receptor Plug Domain EP12_03320 PF13620 Carboxypeptidase regulatory-like domain EP12_03325 PF13302 Acetyltransferase (GNAT) domain EP12_03330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EP12_03335 PF05175 Methyltransferase small domain EP12_03340 PF13532 2OG-Fe(II) oxygenase superfamily EP12_03345 PF01722 BolA-like protein EP12_03350 PF06042 Bacterial protein of unknown function (DUF925) EP12_03355 PF03861 ANTAR domain EP12_03355 PF08376 Nitrate and nitrite sensing EP12_03365 PF00916 EP12_03365 EP12_03365 PF01740 STAS domain EP12_03370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EP12_03370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EP12_03370 PF04324 BFD-like [2Fe-2S] binding domain EP12_03370 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_03375 PF13806 Rieske-like [2Fe-2S] domain EP12_03380 PF00384 Molybdopterin oxidoreductase EP12_03380 PF01568 Molydopterin dinucleotide binding domain EP12_03380 PF04324 BFD-like [2Fe-2S] binding domain EP12_03380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EP12_03385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EP12_03390 PF00591 Glycosyl transferase family, a/b domain EP12_03390 PF02885 Glycosyl transferase family, helical bundle domain EP12_03405 PF13379 NMT1-like family EP12_03410 PF00528 Binding-protein-dependent transport system inner membrane component EP12_03415 PF00005 ABC transporter EP12_03420 PF13372 Alginate export EP12_03425 PF12804 MobA-like NTP transferase domain EP12_03435 PF01323 DSBA-like thioredoxin domain EP12_03440 PF01636 Phosphotransferase enzyme family EP12_03445 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EP12_03445 PF12801 EP12_03445 EP12_03445 PF13746 4Fe-4S dicluster domain EP12_03455 PF11454 EP12_03455 EP12_03465 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_03470 PF04909 Amidohydrolase EP12_03475 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EP12_03475 PF13378 Enolase C-terminal domain-like EP12_03480 PF00596 Class II Aldolase and Adducin N-terminal domain EP12_03485 PF00293 NUDIX domain EP12_03490 PF16576 EP12_03490 EP12_03495 PF00873 AcrB/AcrD/AcrF family EP12_03525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_03530 PF00140 Sigma-70 factor, region 1 EP12_03530 PF03979 Sigma-70 factor, region 1 EP12_03530 PF04539 Sigma-70 region 3 EP12_03530 PF04542 Sigma-70 region 2 EP12_03530 PF04545 Sigma-70, region 4 EP12_03530 PF04546 Sigma-70, non-essential region EP12_03535 PF01807 CHC2 zinc finger EP12_03535 PF08275 DNA primase catalytic core, N-terminal domain EP12_03535 PF08278 DNA primase DnaG DnaB-binding EP12_03535 PF10410 DnaB-helicase binding domain of primase EP12_03535 PF13662 Toprim domain EP12_03540 PF09424 Yqey-like protein EP12_03545 PF01165 Ribosomal protein S21 EP12_03550 PF00814 Glycoprotease family EP12_03555 PF02660 EP12_03555 EP12_03560 PF02152 Dihydroneopterin aldolase EP12_03565 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EP12_03570 PF02673 EP12_03570 EP12_03575 PF01230 HIT domain EP12_03580 PF03571 Peptidase family M49 EP12_03585 PF08668 HDOD domain EP12_03590 PF03594 EP12_03590 EP12_03595 PF01381 Helix-turn-helix EP12_03595 PF07883 Cupin domain EP12_03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_03610 PF00072 Response regulator receiver domain EP12_03610 PF00486 Transcriptional regulatory protein, C terminal EP12_03615 PF00512 His Kinase A (phospho-acceptor) domain EP12_03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_03615 PF11808 EP12_03615 EP12_03620 PF12849 PBP superfamily domain EP12_03625 PF13640 2OG-Fe(II) oxygenase superfamily EP12_03635 PF07715 TonB-dependent Receptor Plug Domain EP12_03640 PF11932 EP12_03640 EP12_03645 PF01618 EP12_03645 EP12_03650 PF01618 EP12_03650 EP12_03655 PF02472 Biopolymer transport protein ExbD/TolR EP12_03665 PF13432 Tetratricopeptide repeat EP12_03670 PF09411 Lipid A 3-O-deacylase (PagL) EP12_03680 PF00072 Response regulator receiver domain EP12_03680 PF00512 His Kinase A (phospho-acceptor) domain EP12_03680 PF00989 PAS fold EP12_03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_03680 PF13426 PAS domain EP12_03685 PF00501 AMP-binding enzyme EP12_03685 PF13193 AMP-binding enzyme C-terminal domain EP12_03700 PF00330 Aconitase family (aconitate hydratase) EP12_03700 PF06434 Aconitate hydratase 2 N-terminus EP12_03700 PF11791 Aconitate B N-terminal domain EP12_03715 PF00330 Aconitase family (aconitate hydratase) EP12_03715 PF06434 Aconitate hydratase 2 N-terminus EP12_03715 PF11791 Aconitate B N-terminal domain EP12_03720 PF02643 Uncharacterized ACR, COG1430 EP12_03725 PF00696 Amino acid kinase family EP12_03730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_03730 PF12729 EP12_03730 EP12_03735 PF00149 Calcineurin-like phosphoesterase EP12_03740 PF04379 Protein of unknown function (DUF525) EP12_03745 PF00398 Ribosomal RNA adenine dimethylase EP12_03750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EP12_03755 PF00639 PPIC-type PPIASE domain EP12_03755 PF09312 SurA N-terminal domain EP12_03760 PF03968 OstA-like protein EP12_03760 PF04453 Organic solvent tolerance protein EP12_03770 PF00226 DnaJ domain EP12_03770 PF05099 Tellurite resistance protein TerB EP12_03775 PF00589 Phage integrase family EP12_03775 PF02899 Phage integrase, N-terminal SAM-like domain EP12_03780 PF10411 Disulfide bond isomerase protein N-terminus EP12_03780 PF13098 Thioredoxin-like domain EP12_03800 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EP12_03805 PF01648 4'-phosphopantetheinyl transferase superfamily EP12_03815 PF02824 TGS domain EP12_03815 PF04607 Region found in RelA / SpoT proteins EP12_03815 PF13291 ACT domain EP12_03815 PF13328 HD domain EP12_03820 PF03819 MazG nucleotide pyrophosphohydrolase domain EP12_03825 PF14559 Tetratricopeptide repeat EP12_03830 PF00572 Ribosomal protein L13 EP12_03835 PF00380 Ribosomal protein S9/S16 EP12_03840 PF04542 Sigma-70 region 2 EP12_03840 PF08281 Sigma-70, region 4 EP12_03845 PF04773 FecR protein EP12_03845 PF16220 EP12_03845 EP12_03845 PF16344 EP12_03845 EP12_03850 PF00593 TonB dependent receptor EP12_03850 PF07660 Secretin and TonB N terminus short domain EP12_03850 PF07715 TonB-dependent Receptor Plug Domain EP12_03855 PF00246 Zinc carboxypeptidase EP12_03860 PF00355 Rieske [2Fe-2S] domain EP12_03860 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EP12_03865 PF00032 Cytochrome b(C-terminal)/b6/petD EP12_03865 PF00033 Cytochrome b(N-terminal)/b6/petB EP12_03870 PF02167 Cytochrome C1 family EP12_03875 PF00043 Glutathione S-transferase, C-terminal domain EP12_03875 PF13417 Glutathione S-transferase, N-terminal domain EP12_03880 PF04386 Stringent starvation protein B EP12_03885 PF06468 Spondin_N EP12_03895 PF00486 Transcriptional regulatory protein, C terminal EP12_03900 PF00571 CBS domain EP12_03900 PF01769 Divalent cation transporter EP12_03900 PF03448 MgtE intracellular N domain EP12_03905 PF00381 PTS HPr component phosphorylation site EP12_03910 PF03668 EP12_03910 EP12_03915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EP12_03920 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EP12_03925 PF00309 EP12_03925 EP12_03925 PF04552 Sigma-54, DNA binding domain EP12_03925 PF04963 Sigma-54 factor, core binding domain EP12_03930 PF00005 ABC transporter EP12_03930 PF12399 Branched-chain amino acid ATP-binding cassette transporter EP12_03935 PF03968 OstA-like protein EP12_03940 PF06835 Lipopolysaccharide-assembly, LptC-related EP12_03945 PF08282 haloacid dehalogenase-like hydrolase EP12_03950 PF00571 CBS domain EP12_03950 PF01380 SIS domain EP12_03955 PF01699 Sodium/calcium exchanger protein EP12_03960 PF00005 ABC transporter EP12_03965 PF02405 EP12_03965 EP12_03970 PF02470 EP12_03970 EP12_03975 PF05494 Toluene tolerance, Ttg2 EP12_03980 PF13466 STAS domain EP12_03985 PF01722 BolA-like protein EP12_03990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EP12_03995 PF13180 PDZ domain EP12_03995 PF13365 Trypsin-like peptidase domain EP12_04005 PF00595 PDZ domain (Also known as DHR or GLGF) EP12_04005 PF13180 PDZ domain EP12_04005 PF13365 Trypsin-like peptidase domain EP12_04010 PF06295 EP12_04010 EP12_04020 PF03969 AFG1-like ATPase EP12_04025 PF01709 Transcriptional regulator EP12_04055 PF00106 short chain dehydrogenase EP12_04060 PF09603 EP12_04060 EP12_04065 PF12697 Alpha/beta hydrolase family EP12_04075 PF02355 Protein export membrane protein EP12_04075 PF07549 SecD/SecF GG Motif EP12_04080 PF00999 Sodium/hydrogen exchanger family EP12_04080 PF02080 TrkA-C domain EP12_04085 PF00072 Response regulator receiver domain EP12_04085 PF00512 His Kinase A (phospho-acceptor) domain EP12_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_04085 PF13426 PAS domain EP12_04090 PF13458 Periplasmic binding protein EP12_04095 PF06719 EP12_04095 EP12_04095 PF12833 Helix-turn-helix domain EP12_04100 PF00465 Iron-containing alcohol dehydrogenase EP12_04105 PF00929 Exonuclease EP12_04120 PF00438 S-adenosylmethionine synthetase, N-terminal domain EP12_04120 PF02772 S-adenosylmethionine synthetase, central domain EP12_04120 PF02773 S-adenosylmethionine synthetase, C-terminal domain EP12_04125 PF00456 Transketolase, thiamine diphosphate binding domain EP12_04125 PF02779 Transketolase, pyrimidine binding domain EP12_04125 PF02780 Transketolase, C-terminal domain EP12_04130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EP12_04130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EP12_04135 PF00162 Phosphoglycerate kinase EP12_04140 PF00274 Fructose-bisphosphate aldolase class-I EP12_04145 PF02541 Ppx/GppA phosphatase family EP12_04150 PF02503 Polyphosphate kinase middle domain EP12_04150 PF13089 Polyphosphate kinase N-terminal domain EP12_04150 PF13090 Polyphosphate kinase C-terminal domain EP12_04155 PF13740 ACT domain EP12_04160 PF00528 Binding-protein-dependent transport system inner membrane component EP12_04165 PF00528 Binding-protein-dependent transport system inner membrane component EP12_04170 PF00005 ABC transporter EP12_04175 PF01895 PhoU domain EP12_04180 PF01384 EP12_04180 EP12_04185 PF00582 Universal stress protein family EP12_04190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_04190 PF03466 LysR substrate binding domain EP12_04200 PF03006 EP12_04200 EP12_04205 PF01047 MarR family EP12_04210 PF02566 OsmC-like protein EP12_04215 PF00578 AhpC/TSA family EP12_04220 PF01205 Uncharacterized protein family UPF0029 EP12_04225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_04225 PF13426 PAS domain EP12_04235 PF13476 AAA domain EP12_04235 PF13558 Putative exonuclease SbcCD, C subunit EP12_04240 PF02627 Carboxymuconolactone decarboxylase family EP12_04240 PF07883 Cupin domain EP12_04250 PF01738 Dienelactone hydrolase family EP12_04255 PF06719 EP12_04255 EP12_04255 PF12833 Helix-turn-helix domain EP12_04260 PF06296 EP12_04260 EP12_04265 PF01381 Helix-turn-helix EP12_04270 PF05598 EP12_04270 EP12_04270 PF13751 EP12_04270 EP12_04275 PF00043 Glutathione S-transferase, C-terminal domain EP12_04275 PF02798 Glutathione S-transferase, N-terminal domain EP12_04280 PF05981 EP12_04280 EP12_04285 PF06629 EP12_04285 EP12_04300 PF01734 Patatin-like phospholipase EP12_04315 PF13529 Peptidase_C39 like family EP12_04320 PF01979 Amidohydrolase family EP12_04335 PF03713 Domain of unknown function (DUF305) EP12_04340 PF07885 Ion channel EP12_04350 PF15956 EP12_04350 EP12_04365 PF05717 EP12_04365 EP12_04370 PF00581 Rhodanese-like domain EP12_04375 PF08534 Redoxin EP12_04380 PF03942 EP12_04380 EP12_04390 PF01610 EP12_04390 EP12_04390 PF14690 EP12_04390 EP12_04415 PF12514 EP12_04415 EP12_04430 PF04172 EP12_04430 EP12_04435 PF00072 Response regulator receiver domain EP12_04440 PF08448 PAS fold EP12_04450 PF07603 EP12_04450 EP12_04455 PF11101 EP12_04455 EP12_04460 PF04055 Radical SAM superfamily EP12_04460 PF06969 HemN C-terminal domain EP12_04465 PF01725 Ham1 family EP12_04470 PF00270 DEAD/DEAH box helicase EP12_04470 PF00271 Helicase conserved C-terminal domain EP12_04475 PF01743 Poly A polymerase head domain EP12_04475 PF12627 Probable RNA and SrmB- binding site of polymerase A EP12_04480 PF13401 AAA domain EP12_04485 PF11871 EP12_04485 EP12_04485 PF16537 EP12_04485 EP12_04495 PF00694 Aconitase C-terminal domain EP12_04500 PF00330 Aconitase family (aconitate hydratase) EP12_04505 PF00180 Isocitrate/isopropylmalate dehydrogenase EP12_04510 PF00682 HMGL-like EP12_04510 PF08502 LeuA allosteric (dimerisation) domain EP12_04520 PF00593 TonB dependent receptor EP12_04520 PF07715 TonB-dependent Receptor Plug Domain EP12_04525 PF00113 Enolase, C-terminal TIM barrel domain EP12_04525 PF03952 Enolase, N-terminal domain EP12_04530 PF00117 Glutamine amidotransferase class-I EP12_04530 PF06418 CTP synthase N-terminus EP12_04540 PF02464 Competence-damaged protein EP12_04545 PF00154 recA bacterial DNA recombination protein EP12_04560 PF00005 ABC transporter EP12_04565 PF12679 EP12_04565 EP12_04570 PF01312 FlhB HrpN YscU SpaS Family EP12_04575 PF02120 Flagellar hook-length control protein FliK EP12_04580 PF00005 ABC transporter EP12_04585 PF03379 EP12_04585 EP12_04590 PF01578 EP12_04590 EP12_04595 PF04995 EP12_04595 EP12_04600 PF03100 CcmE EP12_04605 PF01578 EP12_04605 EP12_04605 PF16327 EP12_04605 EP12_04610 PF08534 Redoxin EP12_04615 PF03918 Cytochrome C biogenesis protein EP12_04630 PF16363 EP12_04630 EP12_04650 PF00005 ABC transporter EP12_04655 PF01061 EP12_04655 EP12_04660 PF02563 Polysaccharide biosynthesis/export protein EP12_04660 PF10531 SLBB domain EP12_04670 PF00953 Glycosyl transferase family 4 EP12_04675 PF00535 Glycosyl transferase family 2 EP12_04685 PF00483 Nucleotidyl transferase EP12_04690 PF12836 Helix-hairpin-helix motif EP12_04695 PF00180 Isocitrate/isopropylmalate dehydrogenase EP12_04700 PF08668 HDOD domain EP12_04705 PF11399 EP12_04705 EP12_04710 PF03641 Possible lysine decarboxylase EP12_04710 PF11892 Domain of unknown function (DUF3412) EP12_04710 PF14793 Domain of unknown function (DUF4478) EP12_04715 PF00990 GGDEF domain EP12_04720 PF14489 QueF-like protein EP12_04720 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EP12_04725 PF07348 Syd protein (SUKH-2) EP12_04735 PF11399 EP12_04735 EP12_04760 PF15937 EP12_04760 EP12_04765 PF11663 EP12_04765 EP12_04770 PF00593 TonB dependent receptor EP12_04770 PF07715 TonB-dependent Receptor Plug Domain EP12_04790 PF11743 EP12_04790 EP12_04805 PF00849 RNA pseudouridylate synthase EP12_04810 PF00258 Flavodoxin EP12_04815 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_04815 PF14602 Hexapeptide repeat of succinyl-transferase EP12_04815 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EP12_04820 PF01909 Nucleotidyltransferase domain EP12_04820 PF01966 HD domain EP12_04820 PF08335 GlnD PII-uridylyltransferase EP12_04825 PF00557 Metallopeptidase family M24 EP12_04830 PF00318 Ribosomal protein S2 EP12_04835 PF00889 Elongation factor TS EP12_04840 PF00696 Amino acid kinase family EP12_04845 PF01765 Ribosome recycling factor EP12_04850 PF01255 Putative undecaprenyl diphosphate synthase EP12_04855 PF01148 Cytidylyltransferase family EP12_04870 PF01103 Surface antigen EP12_04870 PF07244 Surface antigen variable number repeat EP12_04875 PF03938 Outer membrane protein (OmpH-like) EP12_04880 PF07977 FabA-like domain EP12_04885 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_04885 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EP12_04890 PF02684 EP12_04890 EP12_04895 PF01351 Ribonuclease HII EP12_04905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EP12_04915 PF00990 GGDEF domain EP12_04920 PF00999 Sodium/hydrogen exchanger family EP12_04920 PF02080 TrkA-C domain EP12_04920 PF02254 TrkA-N domain EP12_04930 PF14437 EP12_04930 EP12_04935 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_04935 PF01464 Transglycosylase SLT domain EP12_04940 PF02769 AIR synthase related protein, C-terminal domain EP12_04940 PF13507 CobB/CobQ-like glutamine amidotransferase domain EP12_04950 PF01713 Smr domain EP12_04960 PF16538 EP12_04960 EP12_04960 PF16539 EP12_04960 EP12_04960 PF16548 EP12_04960 EP12_04965 PF02169 LPP20 lipoprotein EP12_04970 PF05130 FlgN protein EP12_04975 PF04316 Anti-sigma-28 factor, FlgM EP12_04980 PF13144 SAF-like EP12_04985 PF00072 Response regulator receiver domain EP12_04985 PF01584 CheW-like domain EP12_04990 PF01739 CheR methyltransferase, SAM binding domain EP12_04990 PF03705 CheR methyltransferase, all-alpha domain EP12_04995 PF00460 Flagella basal body rod protein EP12_05000 PF00460 Flagella basal body rod protein EP12_05000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EP12_05010 PF00460 Flagella basal body rod protein EP12_05010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EP12_05010 PF07559 Flagellar basal body protein FlaE EP12_05015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EP12_05020 PF00460 Flagella basal body rod protein EP12_05020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EP12_05025 PF02107 EP12_05025 EP12_05035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EP12_05035 PF10135 EP12_05035 EP12_05040 PF00460 Flagella basal body rod protein EP12_05040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EP12_05045 PF00669 Bacterial flagellin N-terminal helical region EP12_05045 PF00700 Bacterial flagellin C-terminal helical region EP12_05055 PF00669 Bacterial flagellin N-terminal helical region EP12_05055 PF00700 Bacterial flagellin C-terminal helical region EP12_05060 PF00669 Bacterial flagellin N-terminal helical region EP12_05060 PF00700 Bacterial flagellin C-terminal helical region EP12_05075 PF03646 FlaG protein EP12_05080 PF02465 EP12_05080 EP12_05080 PF07195 EP12_05080 EP12_05080 PF07196 Flagellin hook IN motif EP12_05085 PF02561 Flagellar protein FliS EP12_05095 PF02719 Polysaccharide biosynthesis protein EP12_05100 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EP12_05105 PF02348 Cytidylyltransferase EP12_05110 PF03102 NeuB family EP12_05110 PF08666 SAF domain EP12_05120 PF13302 Acetyltransferase (GNAT) domain EP12_05130 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_05140 PF04443 EP12_05140 EP12_05145 PF05893 Acyl-CoA reductase (LuxC) EP12_05170 PF02350 UDP-N-acetylglucosamine 2-epimerase EP12_05175 PF11380 EP12_05175 EP12_05175 PF17101 EP12_05175 EP12_05180 PF13649 Methyltransferase domain EP12_05185 PF12804 MobA-like NTP transferase domain EP12_05195 PF00266 Aminotransferase class-V EP12_05205 PF04991 EP12_05205 EP12_05225 PF13847 Methyltransferase domain EP12_05245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EP12_05245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EP12_05250 PF00551 Formyl transferase EP12_05255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EP12_05260 PF00669 Bacterial flagellin N-terminal helical region EP12_05260 PF00700 Bacterial flagellin C-terminal helical region EP12_05265 PF00158 Sigma-54 interaction domain EP12_05265 PF02954 Bacterial regulatory protein, Fis family EP12_05265 PF06490 EP12_05265 EP12_05270 PF00512 His Kinase A (phospho-acceptor) domain EP12_05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_05270 PF13188 PAS domain EP12_05275 PF00072 Response regulator receiver domain EP12_05275 PF00158 Sigma-54 interaction domain EP12_05275 PF02954 Bacterial regulatory protein, Fis family EP12_05280 PF02049 EP12_05280 EP12_05285 PF01514 Secretory protein of YscJ/FliF family EP12_05285 PF08345 EP12_05285 EP12_05290 PF01706 FliG C-terminal domain EP12_05290 PF14841 FliG middle domain EP12_05290 PF14842 FliG N-terminal domain EP12_05295 PF02108 EP12_05295 EP12_05300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EP12_05305 PF02050 Flagellar FliJ protein EP12_05310 PF02120 Flagellar hook-length control protein FliK EP12_05315 PF03748 EP12_05315 EP12_05320 PF01052 Surface presentation of antigens (SPOA) EP12_05320 PF02154 Flagellar motor switch protein FliM EP12_05325 PF01052 Surface presentation of antigens (SPOA) EP12_05330 PF04347 EP12_05330 EP12_05335 PF00813 EP12_05335 EP12_05345 PF01311 EP12_05345 EP12_05350 PF01312 FlhB HrpN YscU SpaS Family EP12_05355 PF00771 FHIPEP family EP12_05360 PF00448 SRP54-type protein, GTPase domain EP12_05365 PF10609 ParA/MinD ATPase like EP12_05370 PF04542 Sigma-70 region 2 EP12_05370 PF04545 Sigma-70, region 4 EP12_05375 PF00072 Response regulator receiver domain EP12_05380 PF04344 Chemotaxis phosphatase, CheZ EP12_05385 PF01584 CheW-like domain EP12_05385 PF01627 Hpt domain EP12_05385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_05385 PF02895 Signal transducing histidine kinase, homodimeric domain EP12_05390 PF00072 Response regulator receiver domain EP12_05390 PF01339 CheB methylesterase EP12_05395 PF13614 AAA domain EP12_05400 PF01584 CheW-like domain EP12_05405 PF01584 CheW-like domain EP12_05410 PF10975 EP12_05410 EP12_05415 PF04204 Homoserine O-succinyltransferase EP12_05425 PF06080 EP12_05425 EP12_05430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_05430 PF00672 HAMP domain EP12_05430 PF02743 Cache domain EP12_05435 PF06865 Protein of unknown function (DUF1255) EP12_05440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_05440 PF03466 LysR substrate binding domain EP12_05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_05445 PF03466 LysR substrate binding domain EP12_05450 PF00484 Carbonic anhydrase EP12_05460 PF01431 Peptidase family M13 EP12_05460 PF05649 Peptidase family M13 EP12_05465 PF04339 EP12_05465 EP12_05470 PF02631 RecX family EP12_05475 PF01411 tRNA synthetases class II (A) EP12_05475 PF02272 DHHA1 domain EP12_05475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EP12_05480 PF02599 Global regulator protein family EP12_05500 PF04277 EP12_05500 EP12_05505 PF00364 Biotin-requiring enzyme EP12_05505 PF00682 HMGL-like EP12_05505 PF02436 Conserved carboxylase domain EP12_05510 PF03977 EP12_05510 EP12_05520 PF00005 ABC transporter EP12_05520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EP12_05525 PF00528 Binding-protein-dependent transport system inner membrane component EP12_05525 PF12911 EP12_05525 EP12_05530 PF00528 Binding-protein-dependent transport system inner membrane component EP12_05535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EP12_05540 PF00158 Sigma-54 interaction domain EP12_05540 PF02954 Bacterial regulatory protein, Fis family EP12_05545 PF04012 EP12_05545 EP12_05550 PF06667 EP12_05550 EP12_05555 PF04024 EP12_05555 EP12_05560 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EP12_05570 PF01557 Fumarylacetoacetate (FAA) hydrolase family EP12_05575 PF13417 Glutathione S-transferase, N-terminal domain EP12_05580 PF01037 AsnC family EP12_05580 PF13412 Winged helix-turn-helix DNA-binding EP12_05585 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EP12_05585 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EP12_05590 PF10719 EP12_05590 EP12_05595 PF00593 TonB dependent receptor EP12_05595 PF07715 TonB-dependent Receptor Plug Domain EP12_05595 PF13620 Carboxypeptidase regulatory-like domain EP12_05605 PF00593 TonB dependent receptor EP12_05605 PF07715 TonB-dependent Receptor Plug Domain EP12_05615 PF11932 EP12_05615 EP12_05620 PF01618 EP12_05620 EP12_05625 PF01618 EP12_05625 EP12_05635 PF03544 Gram-negative bacterial TonB protein C-terminal EP12_05640 PF13432 Tetratricopeptide repeat EP12_05650 PF05127 Helicase EP12_05650 PF08351 Domain of unknown function (DUF1726) EP12_05650 PF13718 GNAT acetyltransferase 2 EP12_05655 PF03061 Thioesterase superfamily EP12_05670 PF04973 EP12_05670 EP12_05675 PF01636 Phosphotransferase enzyme family EP12_05690 PF00583 Acetyltransferase (GNAT) family EP12_05700 PF00892 EamA-like transporter family EP12_05715 PF00248 Aldo/keto reductase family EP12_05720 PF00990 GGDEF domain EP12_05725 PF07695 EP12_05725 EP12_05750 PF07690 Major Facilitator Superfamily EP12_05755 PF01156 Inosine-uridine preferring nucleoside hydrolase EP12_05760 PF01979 Amidohydrolase family EP12_05765 PF00291 Pyridoxal-phosphate dependent enzyme EP12_05770 PF03372 Endonuclease/Exonuclease/phosphatase family EP12_05785 PF00175 Oxidoreductase NAD-binding domain EP12_05785 PF00970 Oxidoreductase FAD-binding domain EP12_05795 PF01548 EP12_05795 EP12_05795 PF02371 EP12_05795 EP12_05805 PF13673 Acetyltransferase (GNAT) domain EP12_05845 PF00485 Phosphoribulokinase / Uridine kinase family EP12_05850 PF03462 PCRF domain EP12_05855 PF00472 RF-1 domain EP12_05855 PF03462 PCRF domain EP12_05875 PF01627 Hpt domain EP12_05885 PF04262 Glutamate-cysteine ligase EP12_05900 PF00005 ABC transporter EP12_05915 PF00072 Response regulator receiver domain EP12_05915 PF00158 Sigma-54 interaction domain EP12_05915 PF02954 Bacterial regulatory protein, Fis family EP12_05930 PF01713 Smr domain EP12_05935 PF05175 Methyltransferase small domain EP12_05955 PF04293 EP12_05955 EP12_05970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EP12_05970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EP12_05975 PF00462 Glutaredoxin EP12_05980 PF00593 TonB dependent receptor EP12_05980 PF07715 TonB-dependent Receptor Plug Domain EP12_06000 PF04324 BFD-like [2Fe-2S] binding domain EP12_06005 PF00929 Exonuclease EP12_06015 PF03009 Glycerophosphoryl diester phosphodiesterase family EP12_06020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_06025 PF00313 'Cold-shock' DNA-binding domain EP12_06035 PF00990 GGDEF domain EP12_06035 PF07695 EP12_06035 EP12_06040 PF00486 Transcriptional regulatory protein, C terminal EP12_06045 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EP12_06055 PF04542 Sigma-70 region 2 EP12_06055 PF08281 Sigma-70, region 4 EP12_06070 PF13302 Acetyltransferase (GNAT) domain EP12_06075 PF03062 EP12_06075 EP12_06080 PF13396 EP12_06080 EP12_06085 PF06197 EP12_06085 EP12_06090 PF04221 RelB antitoxin EP12_06095 PF05016 Plasmid stabilisation system protein EP12_06135 PF02508 EP12_06135 EP12_06140 PF04205 FMN-binding domain EP12_06145 PF03116 EP12_06145 EP12_06155 PF04060 Putative Fe-S cluster EP12_06155 PF14697 4Fe-4S dicluster domain EP12_06160 PF02508 EP12_06160 EP12_06175 PF01554 MatE EP12_06180 PF00271 Helicase conserved C-terminal domain EP12_06180 PF02151 UvrB/uvrC motif EP12_06180 PF04851 Type III restriction enzyme, res subunit EP12_06180 PF12344 Ultra-violet resistance protein B EP12_06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_06185 PF03466 LysR substrate binding domain EP12_06200 PF06508 Queuosine biosynthesis protein QueC EP12_06205 PF04055 Radical SAM superfamily EP12_06205 PF13394 4Fe-4S single cluster domain EP12_06215 PF00733 Asparagine synthase EP12_06215 PF13537 Glutamine amidotransferase domain EP12_06220 PF02582 EP12_06220 EP12_06225 PF02225 PA domain EP12_06225 PF04389 Peptidase family M28 EP12_06230 PF11227 EP12_06230 EP12_06235 PF04893 EP12_06235 EP12_06240 PF02080 TrkA-C domain EP12_06240 PF03600 Citrate transporter EP12_06250 PF00459 Inositol monophosphatase family EP12_06255 PF01583 Adenylylsulphate kinase EP12_06260 PF01507 Phosphoadenosine phosphosulfate reductase family EP12_06265 PF00474 Sodium:solute symporter family EP12_06275 PF11859 EP12_06275 EP12_06280 PF04542 Sigma-70 region 2 EP12_06280 PF08281 Sigma-70, region 4 EP12_06285 PF05960 Bacterial protein of unknown function (DUF885) EP12_06290 PF13584 EP12_06290 EP12_06295 PF00515 Tetratricopeptide repeat EP12_06295 PF13519 von Willebrand factor type A domain EP12_06300 PF00092 von Willebrand factor type A domain EP12_06310 PF01882 EP12_06310 EP12_06315 PF07726 ATPase family associated with various cellular activities (AAA) EP12_06320 PF00108 Thiolase, N-terminal domain EP12_06320 PF02803 Thiolase, C-terminal domain EP12_06325 PF00378 Enoyl-CoA hydratase/isomerase family EP12_06325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EP12_06325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EP12_06350 PF00675 Insulinase (Peptidase family M16) EP12_06350 PF05193 Peptidase M16 inactive domain EP12_06350 PF16187 EP12_06350 EP12_06355 PF00300 Histidine phosphatase superfamily (branch 1) EP12_06365 PF00571 CBS domain EP12_06365 PF01595 EP12_06365 EP12_06365 PF03471 Transporter associated domain EP12_06370 PF01578 EP12_06370 EP12_06380 PF00448 SRP54-type protein, GTPase domain EP12_06380 PF02881 SRP54-type protein, helical bundle domain EP12_06380 PF02978 Signal peptide binding domain EP12_06415 PF12146 Putative lysophospholipase EP12_06420 PF00873 AcrB/AcrD/AcrF family EP12_06425 PF16576 EP12_06425 EP12_06430 PF00005 ABC transporter EP12_06430 PF00664 ABC transporter transmembrane region EP12_06435 PF01053 Cys/Met metabolism PLP-dependent enzyme EP12_06440 PF13743 Thioredoxin EP12_06445 PF01546 Peptidase family M20/M25/M40 EP12_06445 PF07687 Peptidase dimerisation domain EP12_06450 PF00886 Ribosomal protein S16 EP12_06455 PF01782 RimM N-terminal domain EP12_06455 PF05239 PRC-barrel domain EP12_06460 PF01746 tRNA (Guanine-1)-methyltransferase EP12_06465 PF01245 Ribosomal protein L19 EP12_06470 PF03458 EP12_06470 EP12_06475 PF00378 Enoyl-CoA hydratase/isomerase family EP12_06480 PF00793 DAHP synthetase I family EP12_06485 PF01817 Chorismate mutase type II EP12_06485 PF02153 Prephenate dehydrogenase EP12_06490 PF00800 Prephenate dehydratase EP12_06490 PF01817 Chorismate mutase type II EP12_06500 PF00072 Response regulator receiver domain EP12_06505 PF01253 Translation initiation factor SUI1 EP12_06510 PF13466 STAS domain EP12_06520 PF05099 Tellurite resistance protein TerB EP12_06530 PF13202 EF hand EP12_06535 PF00512 His Kinase A (phospho-acceptor) domain EP12_06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_06545 PF00072 Response regulator receiver domain EP12_06545 PF00158 Sigma-54 interaction domain EP12_06550 PF01904 Protein of unknown function DUF72 EP12_06555 PF00152 tRNA synthetases class II (D, K and N) EP12_06555 PF01336 OB-fold nucleic acid binding domain EP12_06555 PF02938 GAD domain EP12_06560 PF00293 NUDIX domain EP12_06565 PF02075 Crossover junction endodeoxyribonuclease RuvC EP12_06570 PF01330 RuvA N terminal domain EP12_06570 PF07499 RuvA, C-terminal domain EP12_06570 PF14520 Helix-hairpin-helix domain EP12_06575 PF05491 Holliday junction DNA helicase ruvB C-terminus EP12_06575 PF05496 Holliday junction DNA helicase ruvB N-terminus EP12_06580 PF03061 Thioesterase superfamily EP12_06585 PF01618 EP12_06585 EP12_06590 PF02472 Biopolymer transport protein ExbD/TolR EP12_06595 PF06519 TolA C-terminal EP12_06605 PF00691 OmpA family EP12_06610 PF13174 Tetratricopeptide repeat EP12_06610 PF13432 Tetratricopeptide repeat EP12_06610 PF16331 EP12_06610 EP12_06630 PF02445 Quinolinate synthetase A protein EP12_06660 PF13385 Concanavalin A-like lectin/glucanases superfamily EP12_06680 PF13550 EP12_06680 EP12_06730 PF07030 EP12_06730 EP12_06740 PF10124 EP12_06740 EP12_06755 PF05069 EP12_06755 EP12_06765 PF04233 EP12_06765 EP12_06775 PF06074 EP12_06775 EP12_06780 PF03237 Terminase-like family EP12_06785 PF11985 EP12_06785 EP12_06810 PF10805 EP12_06810 EP12_06850 PF13481 AAA domain EP12_06865 PF08765 Mor transcription activator family EP12_06905 PF13401 AAA domain EP12_06910 PF00665 Integrase core domain EP12_06910 PF09299 Mu transposase, C-terminal EP12_06925 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_06930 PF09537 Domain of unknown function (DUF2383) EP12_06955 PF13419 Haloacid dehalogenase-like hydrolase EP12_06965 PF00675 Insulinase (Peptidase family M16) EP12_06965 PF05193 Peptidase M16 inactive domain EP12_06970 PF00072 Response regulator receiver domain EP12_06970 PF00512 His Kinase A (phospho-acceptor) domain EP12_06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_06970 PF13176 Tetratricopeptide repeat EP12_06980 PF01118 Semialdehyde dehydrogenase, NAD binding domain EP12_06980 PF02774 Semialdehyde dehydrogenase, dimerisation domain EP12_06990 PF00106 short chain dehydrogenase EP12_06995 PF00199 Catalase EP12_06995 PF06628 Catalase-related immune-responsive EP12_07000 PF01292 Prokaryotic cytochrome b561 EP12_07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_07005 PF03466 LysR substrate binding domain EP12_07010 PF08240 Alcohol dehydrogenase GroES-like domain EP12_07010 PF13602 Zinc-binding dehydrogenase EP12_07015 PF00571 CBS domain EP12_07025 PF13437 HlyD family secretion protein EP12_07030 PF00440 Bacterial regulatory proteins, tetR family EP12_07030 PF14246 AefR-like transcriptional repressor, C-terminal region EP12_07035 PF00873 AcrB/AcrD/AcrF family EP12_07040 PF13437 HlyD family secretion protein EP12_07040 PF13533 Biotin-lipoyl like EP12_07045 PF00990 GGDEF domain EP12_07055 PF02470 EP12_07055 EP12_07060 PF04403 EP12_07060 EP12_07070 PF03160 Calx-beta domain EP12_07070 PF12799 Leucine Rich repeats (2 copies) EP12_07070 PF13582 Metallo-peptidase family M12B Reprolysin-like EP12_07075 PF03160 Calx-beta domain EP12_07080 PF05015 Plasmid maintenance system killer protein EP12_07085 PF01381 Helix-turn-helix EP12_07090 PF12710 haloacid dehalogenase-like hydrolase EP12_07090 PF13271 EP12_07090 EP12_07095 PF01965 DJ-1/PfpI family EP12_07095 PF12833 Helix-turn-helix domain EP12_07100 PF00144 Beta-lactamase EP12_07105 PF00152 tRNA synthetases class II (D, K and N) EP12_07105 PF01336 OB-fold nucleic acid binding domain EP12_07115 PF01699 Sodium/calcium exchanger protein EP12_07120 PF08443 RimK-like ATP-grasp domain EP12_07120 PF14401 EP12_07120 EP12_07125 PF00583 Acetyltransferase (GNAT) family EP12_07125 PF11814 EP12_07125 EP12_07135 PF11157 EP12_07135 EP12_07140 PF00202 Aminotransferase class-III EP12_07145 PF04055 Radical SAM superfamily EP12_07145 PF06968 Biotin and Thiamin Synthesis associated domain EP12_07150 PF00155 Aminotransferase class I and II EP12_07160 PF13500 AAA domain EP12_07165 PF03575 Peptidase family S51 EP12_07170 PF01451 Low molecular weight phosphotyrosine protein phosphatase EP12_07175 PF01474 Class-II DAHP synthetase family EP12_07180 PF01433 Peptidase family M1 EP12_07185 PF00005 ABC transporter EP12_07200 PF00072 Response regulator receiver domain EP12_07200 PF04397 LytTr DNA-binding domain EP12_07205 PF12843 EP12_07205 EP12_07210 PF00005 ABC transporter EP12_07210 PF00664 ABC transporter transmembrane region EP12_07215 PF04055 Radical SAM superfamily EP12_07215 PF06463 Molybdenum Cofactor Synthesis C EP12_07215 PF13353 4Fe-4S single cluster domain EP12_07220 PF13302 Acetyltransferase (GNAT) domain EP12_07225 PF00072 Response regulator receiver domain EP12_07265 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EP12_07280 PF01207 Dihydrouridine synthase (Dus) EP12_07285 PF01979 Amidohydrolase family EP12_07290 PF07969 Amidohydrolase family EP12_07305 PF13472 GDSL-like Lipase/Acylhydrolase family EP12_07310 PF00005 ABC transporter EP12_07320 PF01370 NAD dependent epimerase/dehydratase family EP12_07320 PF08338 Domain of unknown function (DUF1731) EP12_07325 PF02152 Dihydroneopterin aldolase EP12_07330 PF01594 EP12_07330 EP12_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_07340 PF00072 Response regulator receiver domain EP12_07340 PF00486 Transcriptional regulatory protein, C terminal EP12_07345 PF13670 EP12_07345 EP12_07350 PF16242 EP12_07350 EP12_07355 PF03795 YCII-related domain EP12_07360 PF00290 Tryptophan synthase alpha chain EP12_07370 PF00218 Indole-3-glycerol phosphate synthase EP12_07370 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EP12_07380 PF00117 Glutamine amidotransferase class-I EP12_07385 PF00425 chorismate binding enzyme EP12_07385 PF04715 Anthranilate synthase component I, N terminal region EP12_07390 PF02811 PHP domain EP12_07395 PF01300 Telomere recombination EP12_07400 PF02616 ScpA/B protein EP12_07405 PF04079 Putative transcriptional regulators (Ypuh-like) EP12_07410 PF00849 RNA pseudouridylate synthase EP12_07410 PF01479 S4 domain EP12_07415 PF00248 Aldo/keto reductase family EP12_07420 PF12464 Maltose acetyltransferase EP12_07420 PF14602 Hexapeptide repeat of succinyl-transferase EP12_07430 PF03960 ArsC family EP12_07435 PF04286 EP12_07435 EP12_07440 PF05724 Thiopurine S-methyltransferase (TPMT) EP12_07445 PF04355 SmpA / OmlA family EP12_07460 PF00210 Ferritin-like domain EP12_07465 PF01513 ATP-NAD kinase EP12_07470 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_07490 PF00593 TonB dependent receptor EP12_07490 PF07715 TonB-dependent Receptor Plug Domain EP12_07495 PF00072 Response regulator receiver domain EP12_07495 PF00196 Bacterial regulatory proteins, luxR family EP12_07500 PF13650 Aspartyl protease EP12_07510 PF01025 GrpE EP12_07515 PF00012 Hsp70 protein EP12_07520 PF00226 DnaJ domain EP12_07520 PF00684 DnaJ central domain EP12_07520 PF01556 DnaJ C terminal domain EP12_07525 PF01322 Cytochrome C' EP12_07530 PF00563 EAL domain EP12_07530 PF00990 GGDEF domain EP12_07530 PF13426 PAS domain EP12_07535 PF01292 Prokaryotic cytochrome b561 EP12_07540 PF01113 Dihydrodipicolinate reductase, N-terminus EP12_07540 PF05173 Dihydrodipicolinate reductase, C-terminus EP12_07545 PF00117 Glutamine amidotransferase class-I EP12_07545 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EP12_07550 PF02142 MGS-like domain EP12_07550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EP12_07550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EP12_07555 PF01272 Transcription elongation factor, GreA/GreB, C-term EP12_07555 PF03449 Transcription elongation factor, N-terminal EP12_07560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_07560 PF08376 Nitrate and nitrite sensing EP12_07570 PF00011 Hsp20/alpha crystallin family EP12_07575 PF00871 Acetokinase family EP12_07585 PF00795 Carbon-nitrogen hydrolase EP12_07590 PF00571 CBS domain EP12_07590 PF03471 Transporter associated domain EP12_07595 PF02397 EP12_07595 EP12_07595 PF13727 CoA-binding domain EP12_07600 PF01370 NAD dependent epimerase/dehydratase family EP12_07610 PF02130 Uncharacterized protein family UPF0054 EP12_07615 PF02562 PhoH-like protein EP12_07620 PF00919 Uncharacterized protein family UPF0004 EP12_07620 PF01938 TRAM domain EP12_07620 PF04055 Radical SAM superfamily EP12_07625 PF01494 FAD binding domain EP12_07635 PF00440 Bacterial regulatory proteins, tetR family EP12_07655 PF03061 Thioesterase superfamily EP12_07660 PF01613 Flavin reductase like domain EP12_07665 PF01235 EP12_07665 EP12_07730 PF01386 Ribosomal L25p family EP12_07730 PF14693 Ribosomal protein TL5, C-terminal domain EP12_07760 PF00288 GHMP kinases N terminal domain EP12_07760 PF08544 GHMP kinases C terminal EP12_07765 PF03550 Outer membrane lipoprotein LolB EP12_07775 PF00472 RF-1 domain EP12_07775 PF03462 PCRF domain EP12_07780 PF13847 Methyltransferase domain EP12_07785 PF00072 Response regulator receiver domain EP12_07785 PF01966 HD domain EP12_07785 PF11849 EP12_07785 EP12_07790 PF04247 EP12_07790 EP12_07795 PF00793 DAHP synthetase I family EP12_07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_07805 PF03466 LysR substrate binding domain EP12_07810 PF12146 Putative lysophospholipase EP12_07815 PF04241 EP12_07815 EP12_07820 PF01728 FtsJ-like methyltransferase EP12_07825 PF00009 Elongation factor Tu GTP binding domain EP12_07825 PF00679 Elongation factor G C-terminus EP12_07825 PF03144 Elongation factor Tu domain 2 EP12_07825 PF03764 Elongation factor G, domain IV EP12_07825 PF14492 Elongation Factor G, domain II EP12_07830 PF13302 Acetyltransferase (GNAT) domain EP12_07835 PF02560 Cyanate lyase C-terminal domain EP12_07840 PF00069 Protein kinase domain EP12_07840 PF13672 Protein phosphatase 2C EP12_07850 PF03925 SeqA protein EP12_07850 PF17206 EP12_07850 EP12_07855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EP12_07855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EP12_07855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EP12_07855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EP12_07860 PF00343 Carbohydrate phosphorylase EP12_07865 PF00563 EAL domain EP12_07865 PF00990 GGDEF domain EP12_07870 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EP12_07875 PF01230 HIT domain EP12_07880 PF01906 Putative heavy-metal-binding EP12_07885 PF11446 EP12_07885 EP12_07890 PF02557 D-alanyl-D-alanine carboxypeptidase EP12_07895 PF01546 Peptidase family M20/M25/M40 EP12_07895 PF07687 Peptidase dimerisation domain EP12_07900 PF03960 ArsC family EP12_07905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EP12_07910 PF13840 ACT domain EP12_07920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_07920 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal EP12_07925 PF04209 homogentisate 1,2-dioxygenase EP12_08000 PF12728 Helix-turn-helix domain EP12_08010 PF00589 Phage integrase family EP12_08015 PF00091 Tubulin/FtsZ family, GTPase domain EP12_08015 PF12327 FtsZ family, C-terminal domain EP12_08025 PF00990 GGDEF domain EP12_08025 PF08447 PAS fold EP12_08025 PF13426 PAS domain EP12_08030 PF06181 EP12_08030 EP12_08040 PF00576 HIUase/Transthyretin family EP12_08045 PF09349 OHCU decarboxylase EP12_08055 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EP12_08055 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EP12_08060 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_08060 PF00941 FAD binding domain in molybdopterin dehydrogenase EP12_08060 PF01799 [2Fe-2S] binding domain EP12_08060 PF03450 CO dehydrogenase flavoprotein C-terminal domain EP12_08070 PF01522 Polysaccharide deacetylase EP12_08080 PF00860 Permease family EP12_08095 PF00072 Response regulator receiver domain EP12_08095 PF00563 EAL domain EP12_08095 PF00989 PAS fold EP12_08095 PF00990 GGDEF domain EP12_08105 PF00072 Response regulator receiver domain EP12_08105 PF00512 His Kinase A (phospho-acceptor) domain EP12_08105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_08110 PF06516 EP12_08110 EP12_08115 PF00593 TonB dependent receptor EP12_08115 PF07715 TonB-dependent Receptor Plug Domain EP12_08120 PF11391 EP12_08120 EP12_08130 PF07715 TonB-dependent Receptor Plug Domain EP12_08145 PF05899 Protein of unknown function (DUF861) EP12_08150 PF01546 Peptidase family M20/M25/M40 EP12_08150 PF07687 Peptidase dimerisation domain EP12_08155 PF00266 Aminotransferase class-V EP12_08160 PF01925 EP12_08160 EP12_08165 PF01019 Gamma-glutamyltranspeptidase EP12_08170 PF01425 Amidase EP12_08175 PF06041 Bacterial protein of unknown function (DUF924) EP12_08180 PF01380 SIS domain EP12_08180 PF01418 Helix-turn-helix domain, rpiR family EP12_08185 PF02517 CAAX protease self-immunity EP12_08195 PF11279 EP12_08195 EP12_08200 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_08205 PF03881 Fructosamine kinase EP12_08210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EP12_08210 PF02824 TGS domain EP12_08210 PF03129 Anticodon binding domain EP12_08210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EP12_08215 PF00707 Translation initiation factor IF-3, C-terminal domain EP12_08215 PF05198 Translation initiation factor IF-3, N-terminal domain EP12_08220 PF01632 Ribosomal protein L35 EP12_08225 PF00453 Ribosomal protein L20 EP12_08230 PF00483 Nucleotidyl transferase EP12_08230 PF01050 Mannose-6-phosphate isomerase EP12_08235 PF02397 EP12_08235 EP12_08235 PF13727 CoA-binding domain EP12_08240 PF10082 EP12_08240 EP12_08245 PF02563 Polysaccharide biosynthesis/export protein EP12_08245 PF10531 SLBB domain EP12_08285 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP EP12_08290 PF00534 Glycosyl transferases group 1 EP12_08295 PF00535 Glycosyl transferase family 2 EP12_08310 PF01757 EP12_08310 EP12_08315 PF00535 Glycosyl transferase family 2 EP12_08320 PF00534 Glycosyl transferases group 1 EP12_08320 PF13439 Glycosyltransferase Family 4 EP12_08335 PF13440 EP12_08335 EP12_08335 PF14667 Polysaccharide biosynthesis C-terminal domain EP12_08340 PF04230 EP12_08340 EP12_08355 PF01409 tRNA synthetases class II core domain (F) EP12_08355 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EP12_08360 PF01588 Putative tRNA binding domain EP12_08360 PF03147 Ferredoxin-fold anticodon binding domain EP12_08360 PF03483 B3/4 domain EP12_08360 PF03484 tRNA synthetase B5 domain EP12_08365 PF00216 Bacterial DNA-binding protein EP12_08375 PF04073 Aminoacyl-tRNA editing domain EP12_08380 PF01804 Penicillin amidase EP12_08390 PF01923 Cobalamin adenosyltransferase EP12_08395 PF10972 EP12_08395 EP12_08400 PF00270 DEAD/DEAH box helicase EP12_08400 PF00271 Helicase conserved C-terminal domain EP12_08400 PF02559 CarD-like/TRCF domain EP12_08400 PF03461 TRCF domain EP12_08405 PF07238 PilZ domain EP12_08410 PF02687 EP12_08410 EP12_08410 PF12704 MacB-like periplasmic core domain EP12_08415 PF00156 Phosphoribosyl transferase domain EP12_08425 PF03372 Endonuclease/Exonuclease/phosphatase family EP12_08430 PF01126 Heme oxygenase EP12_08435 PF11042 EP12_08435 EP12_08440 PF02657 Fe-S metabolism associated domain EP12_08445 PF13692 Glycosyl transferases group 1 EP12_08450 PF08668 HDOD domain EP12_08455 PF13622 Thioesterase-like superfamily EP12_08460 PF07690 Major Facilitator Superfamily EP12_08465 PF12697 Alpha/beta hydrolase family EP12_08470 PF00483 Nucleotidyl transferase EP12_08475 PF10604 Polyketide cyclase / dehydrase and lipid transport EP12_08480 PF07690 Major Facilitator Superfamily EP12_08485 PF00682 HMGL-like EP12_08490 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain EP12_08490 PF00364 Biotin-requiring enzyme EP12_08490 PF02785 Biotin carboxylase C-terminal domain EP12_08490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EP12_08495 PF00378 Enoyl-CoA hydratase/isomerase family EP12_08500 PF01039 Carboxyl transferase domain EP12_08510 PF13411 MerR HTH family regulatory protein EP12_08515 PF00108 Thiolase, N-terminal domain EP12_08515 PF02803 Thiolase, C-terminal domain EP12_08520 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_08520 PF00990 GGDEF domain EP12_08530 PF00929 Exonuclease EP12_08530 PF08411 Exonuclease C-terminal EP12_08535 PF00571 CBS domain EP12_08545 PF00149 Calcineurin-like phosphoesterase EP12_08550 PF00593 TonB dependent receptor EP12_08550 PF07715 TonB-dependent Receptor Plug Domain EP12_08550 PF13715 EP12_08550 EP12_08555 PF00990 GGDEF domain EP12_08565 PF03553 EP12_08565 EP12_08575 PF07238 PilZ domain EP12_08580 PF09834 EP12_08580 EP12_08585 PF10672 S-adenosylmethionine-dependent methyltransferase EP12_08590 PF00107 Zinc-binding dehydrogenase EP12_08590 PF08240 Alcohol dehydrogenase GroES-like domain EP12_08595 PF00075 RNase H EP12_08600 PF00929 Exonuclease EP12_08635 PF00005 ABC transporter EP12_08640 PF02687 EP12_08640 EP12_08640 PF12704 MacB-like periplasmic core domain EP12_08650 PF02369 Bacterial Ig-like domain (group 1) EP12_08655 PF04996 Succinylarginine dihydrolase EP12_08665 PF01131 DNA topoisomerase EP12_08665 PF01396 EP12_08665 EP12_08665 PF01751 Toprim domain EP12_08665 PF08272 Topoisomerase I zinc-ribbon-like EP12_08670 PF09831 EP12_08670 EP12_08675 PF00962 Adenosine/AMP deaminase EP12_08680 PF13673 Acetyltransferase (GNAT) domain EP12_08685 PF13419 Haloacid dehalogenase-like hydrolase EP12_08690 PF02958 Ecdysteroid kinase EP12_08700 PF00849 RNA pseudouridylate synthase EP12_08700 PF01479 S4 domain EP12_08710 PF02545 Maf-like protein EP12_08715 PF02620 EP12_08715 EP12_08720 PF01783 Ribosomal L32p protein family EP12_08735 PF00698 Acyl transferase domain EP12_08740 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_08745 PF00550 Phosphopantetheine attachment site EP12_08750 PF00109 Beta-ketoacyl synthase, N-terminal domain EP12_08750 PF02801 Beta-ketoacyl synthase, C-terminal domain EP12_08755 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_08760 PF12697 Alpha/beta hydrolase family EP12_08775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_08775 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_08775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_08775 PF12418 EP12_08775 EP12_08775 PF12806 EP12_08775 EP12_08780 PF12514 EP12_08780 EP12_08785 PF04198 Putative sugar-binding domain EP12_08790 PF13419 Haloacid dehalogenase-like hydrolase EP12_08800 PF01232 Mannitol dehydrogenase Rossmann domain EP12_08800 PF08125 Mannitol dehydrogenase C-terminal domain EP12_08805 PF12514 EP12_08805 EP12_08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_08810 PF03466 LysR substrate binding domain EP12_08815 PF01575 MaoC like domain EP12_08825 PF00924 Mechanosensitive ion channel EP12_08830 PF00593 TonB dependent receptor EP12_08830 PF07715 TonB-dependent Receptor Plug Domain EP12_08835 PF01329 Pterin 4 alpha carbinolamine dehydratase EP12_08855 PF00072 Response regulator receiver domain EP12_08855 PF00512 His Kinase A (phospho-acceptor) domain EP12_08855 PF01627 Hpt domain EP12_08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_08855 PF03707 EP12_08855 EP12_08855 PF08447 PAS fold EP12_08855 PF13426 PAS domain EP12_08860 PF00072 Response regulator receiver domain EP12_08860 PF01966 HD domain EP12_08865 PF02576 Uncharacterised BCR, YhbC family COG0779 EP12_08865 PF17384 EP12_08865 EP12_08870 PF00575 S1 RNA binding domain EP12_08870 PF08529 NusA N-terminal domain EP12_08870 PF13184 NusA-like KH domain EP12_08870 PF14520 Helix-hairpin-helix domain EP12_08875 PF00009 Elongation factor Tu GTP binding domain EP12_08875 PF04760 Translation initiation factor IF-2, N-terminal region EP12_08875 PF08364 EP12_08875 EP12_08875 PF11987 Translation-initiation factor 2 EP12_08880 PF02033 Ribosome-binding factor A EP12_08885 PF01509 TruB family pseudouridylate synthase (N terminal domain) EP12_08885 PF09157 Pseudouridine synthase II TruB, C-terminal EP12_08885 PF16198 EP12_08885 EP12_08890 PF00312 Ribosomal protein S15 EP12_08910 PF00583 Acetyltransferase (GNAT) family EP12_08910 PF00795 Carbon-nitrogen hydrolase EP12_08915 PF13640 2OG-Fe(II) oxygenase superfamily EP12_08920 PF00072 Response regulator receiver domain EP12_08925 PF03372 Endonuclease/Exonuclease/phosphatase family EP12_08930 PF10009 EP12_08930 EP12_08940 PF00578 AhpC/TSA family EP12_08940 PF10417 C-terminal domain of 1-Cys peroxiredoxin EP12_08945 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_08945 PF13192 Thioredoxin domain EP12_08950 PF00593 TonB dependent receptor EP12_08950 PF07715 TonB-dependent Receptor Plug Domain EP12_08970 PF03572 Peptidase family S41 EP12_08980 PF04055 Radical SAM superfamily EP12_08980 PF08497 EP12_08980 EP12_08980 PF11842 EP12_08980 EP12_08985 PF01878 EVE domain EP12_08990 PF07681 EP12_08990 EP12_08995 PF00593 TonB dependent receptor EP12_08995 PF07715 TonB-dependent Receptor Plug Domain EP12_09000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP12_09000 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_09000 PF09335 EP12_09000 EP12_09005 PF04784 EP12_09005 EP12_09010 PF13416 Bacterial extracellular solute-binding protein EP12_09020 PF00005 ABC transporter EP12_09025 PF01066 CDP-alcohol phosphatidyltransferase EP12_09030 PF04116 EP12_09030 EP12_09035 PF06055 EP12_09035 EP12_09040 PF00107 Zinc-binding dehydrogenase EP12_09040 PF08240 Alcohol dehydrogenase GroES-like domain EP12_09045 PF00440 Bacterial regulatory proteins, tetR family EP12_09065 PF11804 EP12_09065 EP12_09070 PF14499 Domain of unknown function (DUF4437) EP12_09075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_09075 PF12729 EP12_09075 EP12_09080 PF00593 TonB dependent receptor EP12_09080 PF07715 TonB-dependent Receptor Plug Domain EP12_09085 PF12040 EP12_09085 EP12_09090 PF12040 EP12_09090 EP12_09090 PF12698 ABC-2 family transporter protein EP12_09095 PF00005 ABC transporter EP12_09120 PF01668 SmpB protein EP12_09125 PF03364 Polyketide cyclase / dehydrase and lipid transport EP12_09130 PF03658 RnfH family Ubiquitin EP12_09135 PF01047 MarR family EP12_09140 PF02028 BCCT family transporter EP12_09145 PF00593 TonB dependent receptor EP12_09145 PF07715 TonB-dependent Receptor Plug Domain EP12_09150 PF13432 Tetratricopeptide repeat EP12_09150 PF13469 Sulfotransferase family EP12_09155 PF03618 EP12_09155 EP12_09165 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EP12_09165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EP12_09165 PF10518 TAT (twin-arginine translocation) pathway signal sequence EP12_09170 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_09170 PF01799 [2Fe-2S] binding domain EP12_09175 PF09656 EP12_09175 EP12_09180 PF01565 FAD binding domain EP12_09180 PF02913 FAD linked oxidases, C-terminal domain EP12_09180 PF13183 4Fe-4S dicluster domain EP12_09185 PF13673 Acetyltransferase (GNAT) domain EP12_09190 PF08007 Cupin superfamily protein EP12_09195 PF00211 Adenylate and Guanylate cyclase catalytic domain EP12_09200 PF00206 Lyase EP12_09200 PF08328 Adenylosuccinate lyase C-terminal EP12_09205 PF04356 Protein of unknown function (DUF489) EP12_09210 PF03054 tRNA methyl transferase EP12_09215 PF00849 RNA pseudouridylate synthase EP12_09220 PF03971 Monomeric isocitrate dehydrogenase EP12_09225 PF00313 'Cold-shock' DNA-binding domain EP12_09230 PF02617 ATP-dependent Clp protease adaptor protein ClpS EP12_09235 PF00004 ATPase family associated with various cellular activities (AAA) EP12_09235 PF02861 Clp amino terminal domain EP12_09235 PF07724 AAA domain (Cdc48 subfamily) EP12_09235 PF10431 C-terminal, D2-small domain, of ClpB protein EP12_09240 PF01176 Translation initiation factor 1A / IF-1 EP12_09245 PF04376 EP12_09245 EP12_09245 PF04377 EP12_09245 EP12_09250 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EP12_09255 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_09260 PF04217 EP12_09260 EP12_09265 PF10263 EP12_09265 EP12_09265 PF17283 EP12_09265 EP12_09270 PF01343 Peptidase family S49 EP12_09280 PF00881 Nitroreductase family EP12_09285 PF10977 EP12_09285 EP12_09290 PF00710 Asparaginase EP12_09295 PF00990 GGDEF domain EP12_09300 PF04055 Radical SAM superfamily EP12_09300 PF16881 EP12_09300 EP12_09305 PF03099 Biotin/lipoate A/B protein ligase family EP12_09310 PF04359 Protein of unknown function (DUF493) EP12_09315 PF00768 D-alanyl-D-alanine carboxypeptidase EP12_09315 PF07943 Penicillin-binding protein 5, C-terminal domain EP12_09320 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel EP12_09320 PF05036 Sporulation related domain EP12_09325 PF01098 EP12_09325 EP12_09330 PF00905 Penicillin binding protein transpeptidase domain EP12_09330 PF03717 Penicillin-binding Protein dimerisation domain EP12_09335 PF02590 Predicted SPOUT methyltransferase EP12_09340 PF02410 Oligomerisation domain EP12_09345 PF01467 Cytidylyltransferase EP12_09350 PF06144 DNA polymerase III, delta subunit EP12_09350 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EP12_09355 PF04390 Lipopolysaccharide-assembly EP12_09360 PF00133 tRNA synthetases class I (I, L, M and V) EP12_09360 PF08264 Anticodon-binding domain of tRNA EP12_09360 PF13603 Leucyl-tRNA synthetase, Domain 2 EP12_09365 PF05362 Lon protease (S16) C-terminal proteolytic domain EP12_09365 PF13654 AAA domain EP12_09370 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_09375 PF01985 CRS1 / YhbY (CRM) domain EP12_09380 PF01728 FtsJ-like methyltransferase EP12_09385 PF00004 ATPase family associated with various cellular activities (AAA) EP12_09385 PF01434 Peptidase family M41 EP12_09385 PF06480 FtsH Extracellular EP12_09390 PF00809 Pterin binding enzyme EP12_09395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EP12_09395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EP12_09395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EP12_09395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EP12_09400 PF00121 Triosephosphate isomerase EP12_09405 PF03840 Preprotein translocase SecG subunit EP12_09425 PF01814 Hemerythrin HHE cation binding domain EP12_09430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EP12_09430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EP12_09435 PF00781 Diacylglycerol kinase catalytic domain EP12_09435 PF00782 Dual specificity phosphatase, catalytic domain EP12_09445 PF00106 short chain dehydrogenase EP12_09460 PF00474 Sodium:solute symporter family EP12_09465 PF00696 Amino acid kinase family EP12_09470 PF00171 Aldehyde dehydrogenase family EP12_09475 PF00924 Mechanosensitive ion channel EP12_09480 PF14279 EP12_09480 EP12_09490 PF00013 KH domain EP12_09490 PF00575 S1 RNA binding domain EP12_09490 PF01138 3' exoribonuclease family, domain 1 EP12_09490 PF03725 3' exoribonuclease family, domain 2 EP12_09490 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EP12_09495 PF06844 Protein of unknown function (DUF1244) EP12_09500 PF10294 Putative methyltransferase EP12_09515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EP12_09530 PF07264 Etoposide-induced protein 2 EP12_09535 PF02463 RecF/RecN/SMC N terminal domain EP12_09540 PF04354 ZipA, C-terminal FtsZ-binding domain EP12_09545 PF00533 BRCA1 C Terminus (BRCT) domain EP12_09545 PF01653 NAD-dependent DNA ligase adenylation domain EP12_09545 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EP12_09545 PF03120 NAD-dependent DNA ligase OB-fold domain EP12_09545 PF12826 Helix-hairpin-helix motif EP12_09550 PF09835 EP12_09550 EP12_09560 PF00005 ABC transporter EP12_09560 PF00664 ABC transporter transmembrane region EP12_09570 PF03966 Trm112p-like protein EP12_09575 PF02348 Cytidylyltransferase EP12_09585 PF00919 Uncharacterized protein family UPF0004 EP12_09585 PF04055 Radical SAM superfamily EP12_09600 PF00144 Beta-lactamase EP12_09615 PF11042 EP12_09615 EP12_09630 PF09720 EP12_09630 EP12_09645 PF04299 Putative FMN-binding domain EP12_09650 PF03050 EP12_09650 EP12_09650 PF13005 EP12_09650 EP12_09650 PF13007 EP12_09650 EP12_09650 PF13817 EP12_09650 EP12_09660 PF13289 EP12_09660 EP12_09665 PF05016 Plasmid stabilisation system protein EP12_09675 PF11143 EP12_09675 EP12_09685 PF00899 ThiF family EP12_09695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EP12_09695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EP12_09695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EP12_09695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EP12_09700 PF11911 EP12_09700 EP12_09705 PF00285 Citrate synthase EP12_09710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EP12_09720 PF00890 FAD binding domain EP12_09720 PF02910 Fumarate reductase flavoprotein C-term EP12_09725 PF13085 2Fe-2S iron-sulfur cluster binding domain EP12_09725 PF13534 4Fe-4S dicluster domain EP12_09730 PF00676 Dehydrogenase E1 component EP12_09730 PF02779 Transketolase, pyrimidine binding domain EP12_09730 PF16078 EP12_09730 EP12_09730 PF16870 EP12_09730 EP12_09735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EP12_09735 PF00364 Biotin-requiring enzyme EP12_09735 PF02817 e3 binding domain EP12_09740 PF00549 CoA-ligase EP12_09740 PF08442 ATP-grasp domain EP12_09745 PF00549 CoA-ligase EP12_09745 PF02629 CoA binding domain EP12_09750 PF07715 TonB-dependent Receptor Plug Domain EP12_09750 PF14905 Outer membrane protein beta-barrel family EP12_09770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EP12_09770 PF03714 Bacterial pullanase-associated domain EP12_09770 PF11852 Domain of unknown function (DUF3372) EP12_09780 PF00588 SpoU rRNA Methylase family EP12_09785 PF00128 Alpha amylase, catalytic domain EP12_09790 PF00128 Alpha amylase, catalytic domain EP12_09790 PF09087 Cyclomaltodextrinase, N-terminal EP12_09790 PF10438 Cyclo-malto-dextrinase C-terminal domain EP12_09800 PF00128 Alpha amylase, catalytic domain EP12_09810 PF00749 tRNA synthetases class I (E and Q), catalytic domain EP12_09810 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EP12_09815 PF00106 short chain dehydrogenase EP12_09820 PF12262 EP12_09820 EP12_09825 PF01804 Penicillin amidase EP12_09830 PF01343 Peptidase family S49 EP12_09830 PF08496 EP12_09830 EP12_09835 PF00440 Bacterial regulatory proteins, tetR family EP12_09845 PF08242 Methyltransferase domain EP12_09855 PF00255 Glutathione peroxidase EP12_09860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EP12_09860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EP12_09865 PF00072 Response regulator receiver domain EP12_09870 PF00171 Aldehyde dehydrogenase family EP12_09875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_09875 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_09875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_09885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EP12_09885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EP12_09890 PF13847 Methyltransferase domain EP12_09895 PF13242 HAD-hyrolase-like EP12_09900 PF11893 EP12_09900 EP12_09905 PF07208 Protein of unknown function (DUF1414) EP12_09910 PF04245 EP12_09910 EP12_09915 PF01242 6-pyruvoyl tetrahydropterin synthase EP12_09920 PF01551 Peptidase family M23 EP12_09925 PF05299 M61 glycyl aminopeptidase EP12_09925 PF13180 PDZ domain EP12_09930 PF07238 PilZ domain EP12_09930 PF12945 Flagellar protein YcgR EP12_09935 PF06127 EP12_09935 EP12_09940 PF06580 EP12_09940 EP12_09945 PF00072 Response regulator receiver domain EP12_09945 PF04397 LytTr DNA-binding domain EP12_09950 PF00365 Phosphofructokinase EP12_09965 PF02384 N-6 DNA Methylase EP12_09965 PF12161 HsdM N-terminal domain EP12_09975 PF14267 EP12_09975 EP12_09980 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EP12_09980 PF04851 Type III restriction enzyme, res subunit EP12_09985 PF01863 Protein of unknown function DUF45 EP12_09995 PF08238 Sel1 repeat EP12_10000 PF04986 EP12_10000 EP12_10000 PF14319 EP12_10000 EP12_10005 PF00581 Rhodanese-like domain EP12_10005 PF00753 Metallo-beta-lactamase superfamily EP12_10030 PF00005 ABC transporter EP12_10035 PF10615 Protein of unknown function (DUF2470) EP12_10035 PF13883 Pyridoxamine 5'-phosphate oxidase EP12_10040 PF00593 TonB dependent receptor EP12_10040 PF07715 TonB-dependent Receptor Plug Domain EP12_10065 PF00072 Response regulator receiver domain EP12_10065 PF13432 Tetratricopeptide repeat EP12_10080 PF13499 EF-hand domain pair EP12_10085 PF00849 RNA pseudouridylate synthase EP12_10085 PF01479 S4 domain EP12_10095 PF00563 EAL domain EP12_10095 PF00990 GGDEF domain EP12_10095 PF01590 GAF domain EP12_10095 PF13185 GAF domain EP12_10100 PF00270 DEAD/DEAH box helicase EP12_10100 PF00271 Helicase conserved C-terminal domain EP12_10105 PF01144 Coenzyme A transferase EP12_10110 PF01144 Coenzyme A transferase EP12_10120 PF08291 Peptidase M15 EP12_10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_10140 PF03466 LysR substrate binding domain EP12_10145 PF03313 EP12_10145 EP12_10145 PF03315 Serine dehydratase beta chain EP12_10150 PF00293 NUDIX domain EP12_10155 PF00425 chorismate binding enzyme EP12_10155 PF04715 Anthranilate synthase component I, N terminal region EP12_10160 PF05681 EP12_10160 EP12_10160 PF05683 Fumarase C-terminus EP12_10165 PF02646 EP12_10165 EP12_10170 PF00990 GGDEF domain EP12_10185 PF02586 Uncharacterised ACR, COG2135 EP12_10190 PF00082 Subtilase family EP12_10190 PF02225 PA domain EP12_10195 PF00676 Dehydrogenase E1 component EP12_10200 PF02779 Transketolase, pyrimidine binding domain EP12_10200 PF02780 Transketolase, C-terminal domain EP12_10205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EP12_10205 PF00364 Biotin-requiring enzyme EP12_10205 PF02817 e3 binding domain EP12_10210 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ EP12_10215 PF00069 Protein kinase domain EP12_10220 PF13622 Thioesterase-like superfamily EP12_10225 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_10230 PF00266 Aminotransferase class-V EP12_10240 PF13185 GAF domain EP12_10250 PF04352 ProQ/FINO family EP12_10250 PF17516 EP12_10250 EP12_10255 PF00595 PDZ domain (Also known as DHR or GLGF) EP12_10255 PF03572 Peptidase family S41 EP12_10255 PF11818 EP12_10255 EP12_10260 PF00209 Sodium:neurotransmitter symporter family EP12_10275 PF11197 EP12_10275 EP12_10285 PF00665 Integrase core domain EP12_10300 PF04214 EP12_10300 EP12_10305 PF02321 Outer membrane efflux protein EP12_10310 PF11604 Copper binding periplasmic protein CusF EP12_10310 PF16576 EP12_10310 EP12_10315 PF00873 AcrB/AcrD/AcrF family EP12_10325 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_10325 PF00175 Oxidoreductase NAD-binding domain EP12_10325 PF00970 Oxidoreductase FAD-binding domain EP12_10330 PF04234 CopC domain EP12_10335 PF05425 EP12_10335 EP12_10340 PF08332 Calcium/calmodulin dependent protein kinase II Association EP12_10345 PF13474 SnoaL-like domain EP12_10350 PF07786 EP12_10350 EP12_10360 PF00106 short chain dehydrogenase EP12_10360 PF01565 FAD binding domain EP12_10380 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_10380 PF00175 Oxidoreductase NAD-binding domain EP12_10380 PF00970 Oxidoreductase FAD-binding domain EP12_10390 PF02085 Class III cytochrome C family EP12_10405 PF00586 AIR synthase related protein, N-terminal domain EP12_10405 PF02769 AIR synthase related protein, C-terminal domain EP12_10410 PF00376 MerR family regulatory protein EP12_10410 PF09278 MerR, DNA binding EP12_10415 PF00122 E1-E2 ATPase EP12_10415 PF00403 Heavy-metal-associated domain EP12_10415 PF00702 haloacid dehalogenase-like hydrolase EP12_10420 PF13473 Cupredoxin-like domain EP12_10425 PF11666 EP12_10425 EP12_10430 PF04191 Phospholipid methyltransferase EP12_10460 PF00462 Glutaredoxin EP12_10465 PF03713 Domain of unknown function (DUF305) EP12_10470 PF07885 Ion channel EP12_10475 PF05275 EP12_10475 EP12_10480 PF00394 Multicopper oxidase EP12_10480 PF07731 Multicopper oxidase EP12_10480 PF07732 Multicopper oxidase EP12_10490 PF13520 Amino acid permease EP12_10505 PF12833 Helix-turn-helix domain EP12_10510 PF13411 MerR HTH family regulatory protein EP12_10515 PF01545 Cation efflux family EP12_10520 PF02321 Outer membrane efflux protein EP12_10525 PF13437 HlyD family secretion protein EP12_10525 PF16576 EP12_10525 EP12_10530 PF00873 AcrB/AcrD/AcrF family EP12_10535 PF01545 Cation efflux family EP12_10545 PF02321 Outer membrane efflux protein EP12_10550 PF16576 EP12_10550 EP12_10555 PF00873 AcrB/AcrD/AcrF family EP12_10560 PF00593 TonB dependent receptor EP12_10560 PF07715 TonB-dependent Receptor Plug Domain EP12_10595 PF00589 Phage integrase family EP12_10600 PF13411 MerR HTH family regulatory protein EP12_10605 PF02411 EP12_10605 EP12_10610 PF00403 Heavy-metal-associated domain EP12_10625 PF00665 Integrase core domain EP12_10625 PF13276 EP12_10625 EP12_10630 PF01527 Transposase EP12_10635 PF01526 EP12_10635 EP12_10635 PF13700 EP12_10635 EP12_10640 PF10263 EP12_10640 EP12_10655 PF01381 Helix-turn-helix EP12_10665 PF11740 EP12_10665 EP12_10680 PF00512 His Kinase A (phospho-acceptor) domain EP12_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_10685 PF00072 Response regulator receiver domain EP12_10685 PF00486 Transcriptional regulatory protein, C terminal EP12_10690 PF06980 EP12_10690 EP12_10695 PF07044 Protein of unknown function (DUF1329) EP12_10700 PF14870 Photosynthesis system II assembly factor YCF48 EP12_10715 PF01180 Dihydroorotate dehydrogenase EP12_10720 PF01170 Putative RNA methylase family UPF0020 EP12_10720 PF02926 THUMP domain EP12_10720 PF10672 S-adenosylmethionine-dependent methyltransferase EP12_10725 PF05768 Glutaredoxin-like domain (DUF836) EP12_10730 PF00005 ABC transporter EP12_10730 PF12848 ABC transporter EP12_10730 PF16326 EP12_10730 EP12_10735 PF11949 EP12_10735 EP12_10740 PF04957 Ribosome modulation factor EP12_10745 PF07977 FabA-like domain EP12_10755 PF00875 DNA photolyase EP12_10755 PF03441 FAD binding domain of DNA photolyase EP12_10765 PF00875 DNA photolyase EP12_10765 PF03441 FAD binding domain of DNA photolyase EP12_10770 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EP12_10775 PF10011 Predicted membrane protein (DUF2254) EP12_10780 PF00589 Phage integrase family EP12_10790 PF01219 Prokaryotic diacylglycerol kinase EP12_10795 PF00582 Universal stress protein family EP12_10800 PF00034 Cytochrome c EP12_10815 PF00210 Ferritin-like domain EP12_10820 PF00210 Ferritin-like domain EP12_10830 PF00115 Cytochrome C and Quinol oxidase polypeptide I EP12_10835 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO EP12_10840 PF05545 EP12_10840 EP12_10845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EP12_10845 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EP12_10850 PF05751 EP12_10850 EP12_10855 PF00122 E1-E2 ATPase EP12_10855 PF00403 Heavy-metal-associated domain EP12_10855 PF00702 haloacid dehalogenase-like hydrolase EP12_10855 PF12156 EP12_10855 EP12_10860 PF03597 EP12_10860 EP12_10865 PF13386 EP12_10865 EP12_10870 PF00027 Cyclic nucleotide-binding domain EP12_10870 PF13545 Crp-like helix-turn-helix domain EP12_10875 PF00582 Universal stress protein family EP12_10880 PF01171 PP-loop family EP12_10885 PF01734 Patatin-like phospholipase EP12_10890 PF11205 EP12_10890 EP12_10895 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EP12_10905 PF01810 EP12_10905 EP12_10910 PF02146 Sir2 family EP12_10915 PF00581 Rhodanese-like domain EP12_10920 PF08534 Redoxin EP12_10925 PF03942 EP12_10925 EP12_10935 PF01610 EP12_10935 EP12_10935 PF14690 EP12_10935 EP12_10965 PF05930 Prophage CP4-57 regulatory protein (AlpA) EP12_10980 PF00589 Phage integrase family EP12_10980 PF13356 Domain of unknown function (DUF4102) EP12_11000 PF01066 CDP-alcohol phosphatidyltransferase EP12_11005 PF01541 GIY-YIG catalytic domain EP12_11005 PF02151 UvrB/uvrC motif EP12_11005 PF08459 UvrC Helix-hairpin-helix N-terminal EP12_11005 PF14520 Helix-hairpin-helix domain EP12_11010 PF00072 Response regulator receiver domain EP12_11010 PF00196 Bacterial regulatory proteins, luxR family EP12_11015 PF02678 Pirin EP12_11025 PF03781 Sulfatase-modifying factor enzyme 1 EP12_11025 PF12867 DinB superfamily EP12_11025 PF13847 Methyltransferase domain EP12_11035 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EP12_11040 PF07681 EP12_11040 EP12_11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_11045 PF03466 LysR substrate binding domain EP12_11050 PF11840 EP12_11050 EP12_11060 PF01027 Inhibitor of apoptosis-promoting Bax1 EP12_11065 PF02635 DsrE/DsrF-like family EP12_11070 PF02635 DsrE/DsrF-like family EP12_11075 PF04077 DsrH like protein EP12_11080 PF04358 DsrC like protein EP12_11085 PF08282 haloacid dehalogenase-like hydrolase EP12_11090 PF03783 Curli production assembly/transport component CsgG EP12_11095 PF16068 EP12_11095 EP12_11100 PF05643 Putative bacterial lipoprotein (DUF799) EP12_11105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EP12_11105 PF02403 Seryl-tRNA synthetase N-terminal domain EP12_11110 PF02537 EP12_11110 EP12_11115 PF00004 ATPase family associated with various cellular activities (AAA) EP12_11115 PF12002 MgsA AAA+ ATPase C terminal EP12_11115 PF16193 EP12_11115 EP12_11120 PF03548 Outer membrane lipoprotein carrier protein LolA EP12_11125 PF01580 FtsK/SpoIIIE family EP12_11125 PF09397 Ftsk gamma domain EP12_11125 PF13491 EP12_11125 EP12_11130 PF01037 AsnC family EP12_11130 PF13412 Winged helix-turn-helix DNA-binding EP12_11135 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EP12_11135 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EP12_11140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EP12_11145 PF13432 Tetratricopeptide repeat EP12_11150 PF06305 EP12_11150 EP12_11160 PF00216 Bacterial DNA-binding protein EP12_11165 PF00575 S1 RNA binding domain EP12_11170 PF02224 Cytidylate kinase EP12_11175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EP12_11180 PF00266 Aminotransferase class-V EP12_11190 PF13489 Methyltransferase domain EP12_11200 PF00317 Ribonucleotide reductase, all-alpha domain EP12_11200 PF02867 Ribonucleotide reductase, barrel domain EP12_11200 PF03477 ATP cone domain EP12_11205 PF00268 Ribonucleotide reductase, small chain EP12_11210 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_11235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EP12_11240 PF00892 EamA-like transporter family EP12_11245 PF01259 SAICAR synthetase EP12_11250 PF06804 NlpB/DapX lipoprotein EP12_11255 PF00701 Dihydrodipicolinate synthetase family EP12_11260 PF13740 ACT domain EP12_11265 PF00578 AhpC/TSA family EP12_11270 PF01594 EP12_11270 EP12_11275 PF01435 Peptidase family M48 EP12_11280 PF00578 AhpC/TSA family EP12_11290 PF03358 NADPH-dependent FMN reductase EP12_11295 PF09842 EP12_11295 EP12_11330 PF00557 Metallopeptidase family M24 EP12_11335 PF01965 DJ-1/PfpI family EP12_11340 PF13470 EP12_11340 EP12_11345 PF05534 EP12_11345 EP12_11350 PF00308 Bacterial dnaA protein EP12_11355 PF09839 EP12_11355 EP12_11370 PF11306 Protein of unknown function (DUF3108) EP12_11380 PF00072 Response regulator receiver domain EP12_11380 PF00196 Bacterial regulatory proteins, luxR family EP12_11385 PF13649 Methyltransferase domain EP12_11395 PF00485 Phosphoribulokinase / Uridine kinase family EP12_11400 PF08282 haloacid dehalogenase-like hydrolase EP12_11410 PF00128 Alpha amylase, catalytic domain EP12_11415 PF13419 Haloacid dehalogenase-like hydrolase EP12_11420 PF00994 Probable molybdopterin binding domain EP12_11420 PF03453 MoeA N-terminal region (domain I and II) EP12_11420 PF03454 MoeA C-terminal region (domain IV) EP12_11425 PF01554 MatE EP12_11430 PF12804 MobA-like NTP transferase domain EP12_11435 PF05762 VWA domain containing CoxE-like protein EP12_11445 PF00291 Pyridoxal-phosphate dependent enzyme EP12_11460 PF13276 EP12_11460 EP12_11460 PF13683 EP12_11460 EP12_11465 PF01527 Transposase EP12_11470 PF07693 EP12_11470 EP12_11475 PF01019 Gamma-glutamyltranspeptidase EP12_11480 PF00378 Enoyl-CoA hydratase/isomerase family EP12_11485 PF01694 Rhomboid family EP12_11490 PF00326 Prolyl oligopeptidase family EP12_11490 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EP12_11495 PF00255 Glutathione peroxidase EP12_11500 PF02525 Flavodoxin-like fold EP12_11505 PF01053 Cys/Met metabolism PLP-dependent enzyme EP12_11510 PF01553 Acyltransferase EP12_11515 PF05742 EP12_11515 EP12_11520 PF00155 Aminotransferase class I and II EP12_11525 PF12487 EP12_11525 EP12_11535 PF08908 EP12_11535 EP12_11540 PF02639 EP12_11540 EP12_11545 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_11550 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_11555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_11555 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_11555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_11555 PF12418 EP12_11555 EP12_11555 PF12806 EP12_11555 EP12_11560 PF01965 DJ-1/PfpI family EP12_11560 PF12833 Helix-turn-helix domain EP12_11565 PF00593 TonB dependent receptor EP12_11565 PF07715 TonB-dependent Receptor Plug Domain EP12_11580 PF00873 AcrB/AcrD/AcrF family EP12_11585 PF13437 HlyD family secretion protein EP12_11590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EP12_11595 PF00766 Electron transfer flavoprotein FAD-binding domain EP12_11595 PF01012 Electron transfer flavoprotein domain EP12_11600 PF01012 Electron transfer flavoprotein domain EP12_11610 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase EP12_11610 PF13450 NAD(P)-binding Rossmann-like domain EP12_11615 PF00816 H-NS histone family EP12_11620 PF00561 alpha/beta hydrolase fold EP12_11625 PF10981 EP12_11625 EP12_11630 PF00258 Flavodoxin EP12_11635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_11635 PF00672 HAMP domain EP12_11640 PF01475 Ferric uptake regulator family EP12_11645 PF01063 Aminotransferase class IV EP12_11650 PF02626 Allophanate hydrolase subunit 2 EP12_11655 PF02682 Allophanate hydrolase subunit 1 EP12_11660 PF03746 LamB/YcsF family EP12_11665 PF13509 S1 domain EP12_11670 PF02566 OsmC-like protein EP12_11675 PF12514 EP12_11675 EP12_11680 PF09955 EP12_11680 EP12_11690 PF13023 HD domain EP12_11695 PF01966 HD domain EP12_11695 PF13286 Phosphohydrolase-associated domain EP12_11700 PF00196 Bacterial regulatory proteins, luxR family EP12_11705 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EP12_11710 PF00593 TonB dependent receptor EP12_11710 PF07715 TonB-dependent Receptor Plug Domain EP12_11715 PF00174 Oxidoreductase molybdopterin binding domain EP12_11725 PF09335 EP12_11725 EP12_11735 PF02810 SEC-C motif EP12_11740 PF01936 NYN domain EP12_11750 PF00583 Acetyltransferase (GNAT) family EP12_11755 PF00990 GGDEF domain EP12_11755 PF07494 Two component regulator propeller EP12_11755 PF07495 Y_Y_Y domain EP12_11760 PF13460 NADH(P)-binding EP12_11765 PF12766 Pyridoxamine 5'-phosphate oxidase EP12_11770 PF01026 TatD related DNase EP12_11775 PF13177 DNA polymerase III, delta subunit EP12_11780 PF02223 Thymidylate kinase EP12_11785 PF02618 YceG-like family EP12_11800 PF00107 Zinc-binding dehydrogenase EP12_11800 PF08240 Alcohol dehydrogenase GroES-like domain EP12_11805 PF01636 Phosphotransferase enzyme family EP12_11810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_11810 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_11810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_11815 PF00300 Histidine phosphatase superfamily (branch 1) EP12_11825 PF02625 XdhC and CoxI family EP12_11825 PF13478 XdhC Rossmann domain EP12_11830 PF01323 DSBA-like thioredoxin domain EP12_11835 PF04055 Radical SAM superfamily EP12_11845 PF00528 Binding-protein-dependent transport system inner membrane component EP12_11855 PF02391 MoaE protein EP12_11860 PF02597 ThiS family EP12_11865 PF01967 MoaC family EP12_11870 PF00994 Probable molybdopterin binding domain EP12_11875 PF00899 ThiF family EP12_11880 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EP12_11890 PF16313 EP12_11890 EP12_11890 PF17148 EP12_11890 EP12_11895 PF00155 Aminotransferase class I and II EP12_11900 PF03435 Saccharopine dehydrogenase EP12_11905 PF00155 Aminotransferase class I and II EP12_11910 PF07498 Rho termination factor, N-terminal domain EP12_11920 PF03567 Sulfotransferase family EP12_11930 PF13538 UvrD-like helicase C-terminal domain EP12_11930 PF13604 AAA domain EP12_11940 PF04257 Exodeoxyribonuclease V, gamma subunit EP12_11950 PF08761 dUTPase EP12_11955 PF00501 AMP-binding enzyme EP12_11960 PF00563 EAL domain EP12_11960 PF00990 GGDEF domain EP12_11960 PF07494 Two component regulator propeller EP12_11960 PF13426 PAS domain EP12_11965 PF00753 Metallo-beta-lactamase superfamily EP12_11965 PF07521 RNA-metabolising metallo-beta-lactamase EP12_11970 PF04337 Protein of unknown function, DUF480 EP12_11975 PF10982 Protein of unknown function (DUF2789) EP12_11985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_11985 PF03466 LysR substrate binding domain EP12_12000 PF04219 EP12_12000 EP12_12010 PF01022 Bacterial regulatory protein, arsR family EP12_12015 PF00581 Rhodanese-like domain EP12_12020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_12020 PF03466 LysR substrate binding domain EP12_12025 PF06055 EP12_12025 EP12_12030 PF00072 Response regulator receiver domain EP12_12030 PF00158 Sigma-54 interaction domain EP12_12030 PF02954 Bacterial regulatory protein, Fis family EP12_12040 PF00512 His Kinase A (phospho-acceptor) domain EP12_12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_12040 PF05227 CHASE3 domain EP12_12045 PF00072 Response regulator receiver domain EP12_12075 PF07043 EP12_12075 EP12_12090 PF03993 EP12_12090 EP12_12095 PF07023 EP12_12095 EP12_12105 PF01235 EP12_12105 EP12_12120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EP12_12120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EP12_12125 PF11207 EP12_12125 EP12_12130 PF01641 SelR domain EP12_12135 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EP12_12135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EP12_12140 PF00128 Alpha amylase, catalytic domain EP12_12140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EP12_12150 PF02446 4-alpha-glucanotransferase EP12_12160 PF01263 Aldose 1-epimerase EP12_12170 PF01081 KDPG and KHG aldolase EP12_12175 PF02685 Glucokinase EP12_12180 PF00920 Dehydratase family EP12_12190 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EP12_12190 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EP12_12195 PF01380 SIS domain EP12_12195 PF01418 Helix-turn-helix domain, rpiR family EP12_12200 PF00224 Pyruvate kinase, barrel domain EP12_12200 PF02887 Pyruvate kinase, alpha/beta domain EP12_12205 PF01048 Phosphorylase superfamily EP12_12220 PF04972 BON domain EP12_12225 PF03372 Endonuclease/Exonuclease/phosphatase family EP12_12245 PF00512 His Kinase A (phospho-acceptor) domain EP12_12245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_12250 PF00072 Response regulator receiver domain EP12_12250 PF00486 Transcriptional regulatory protein, C terminal EP12_12255 PF14240 EP12_12255 EP12_12270 PF08892 EP12_12270 EP12_12275 PF09347 Domain of unknown function (DUF1989) EP12_12280 PF16153 EP12_12280 EP12_12290 PF04962 KduI/IolB family EP12_12295 PF03480 Bacterial extracellular solute-binding protein, family 7 EP12_12300 PF04290 EP12_12300 EP12_12310 PF00356 Bacterial regulatory proteins, lacI family EP12_12310 PF13377 Periplasmic binding protein-like domain EP12_12315 PF04295 EP12_12315 EP12_12315 PF08666 SAF domain EP12_12320 PF02614 Glucuronate isomerase EP12_12325 PF01232 Mannitol dehydrogenase Rossmann domain EP12_12325 PF08125 Mannitol dehydrogenase C-terminal domain EP12_12330 PF00294 pfkB family carbohydrate kinase EP12_12335 PF13472 GDSL-like Lipase/Acylhydrolase family EP12_12340 PF00593 TonB dependent receptor EP12_12340 PF07715 TonB-dependent Receptor Plug Domain EP12_12345 PF07470 Glycosyl Hydrolase Family 88 EP12_12350 PF00295 Glycosyl hydrolases family 28 EP12_12355 PF01095 Pectinesterase EP12_12365 PF13280 EP12_12365 EP12_12375 PF00873 AcrB/AcrD/AcrF family EP12_12380 PF16576 EP12_12380 EP12_12390 PF00005 ABC transporter EP12_12405 PF00356 Bacterial regulatory proteins, lacI family EP12_12405 PF13377 Periplasmic binding protein-like domain EP12_12410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EP12_12410 PF13378 Enolase C-terminal domain-like EP12_12415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EP12_12430 PF00563 EAL domain EP12_12430 PF00990 GGDEF domain EP12_12450 PF07813 LTXXQ motif family protein EP12_12455 PF00072 Response regulator receiver domain EP12_12455 PF00486 Transcriptional regulatory protein, C terminal EP12_12460 PF00512 His Kinase A (phospho-acceptor) domain EP12_12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_12465 PF00881 Nitroreductase family EP12_12470 PF01966 HD domain EP12_12470 PF11849 EP12_12470 EP12_12480 PF00939 Sodium:sulfate symporter transmembrane region EP12_12485 PF00692 dUTPase EP12_12490 PF10609 ParA/MinD ATPase like EP12_12495 PF01588 Putative tRNA binding domain EP12_12495 PF09334 tRNA synthetases class I (M) EP12_12500 PF08241 Methyltransferase domain EP12_12505 PF00753 Metallo-beta-lactamase superfamily EP12_12505 PF16123 EP12_12505 EP12_12525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EP12_12530 PF00149 Calcineurin-like phosphoesterase EP12_12535 PF00245 Alkaline phosphatase EP12_12540 PF00245 Alkaline phosphatase EP12_12540 PF01391 Collagen triple helix repeat (20 copies) EP12_12560 PF08240 Alcohol dehydrogenase GroES-like domain EP12_12560 PF13602 Zinc-binding dehydrogenase EP12_12565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_12565 PF03466 LysR substrate binding domain EP12_12570 PF04336 EP12_12570 EP12_12575 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EP12_12585 PF00156 Phosphoribosyl transferase domain EP12_12585 PF13522 Glutamine amidotransferase domain EP12_12590 PF02674 EP12_12590 EP12_12595 PF05036 Sporulation related domain EP12_12600 PF02875 Mur ligase family, glutamate ligase domain EP12_12600 PF08245 Mur ligase middle domain EP12_12605 PF01039 Carboxyl transferase domain EP12_12610 PF01416 tRNA pseudouridine synthase EP12_12630 PF00027 Cyclic nucleotide-binding domain EP12_12630 PF13545 Crp-like helix-turn-helix domain EP12_12635 PF00109 Beta-ketoacyl synthase, N-terminal domain EP12_12635 PF02801 Beta-ketoacyl synthase, C-terminal domain EP12_12660 PF00486 Transcriptional regulatory protein, C terminal EP12_12675 PF08891 EP12_12675 EP12_12695 PF03061 Thioesterase superfamily EP12_12700 PF13975 EP12_12700 EP12_12715 PF00440 Bacterial regulatory proteins, tetR family EP12_12715 PF13305 WHG domain EP12_12730 PF03007 EP12_12730 EP12_12730 PF06974 EP12_12730 EP12_12735 PF00440 Bacterial regulatory proteins, tetR family EP12_12735 PF13972 Bacterial transcriptional repressor EP12_12740 PF04286 EP12_12740 EP12_12745 PF01734 Patatin-like phospholipase EP12_12745 PF11815 EP12_12745 EP12_12760 PF05597 EP12_12760 EP12_12765 PF00326 Prolyl oligopeptidase family EP12_12765 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EP12_12770 PF00392 Bacterial regulatory proteins, gntR family EP12_12770 PF07840 FadR C-terminal domain EP12_12780 PF02600 Disulfide bond formation protein DsbB EP12_12785 PF13302 Acetyltransferase (GNAT) domain EP12_12790 PF03692 EP12_12790 EP12_12795 PF01557 Fumarylacetoacetate (FAA) hydrolase family EP12_12805 PF05166 YcgL domain EP12_12810 PF00570 HRDC domain EP12_12810 PF01612 3'-5' exonuclease EP12_12815 PF00501 AMP-binding enzyme EP12_12815 PF13193 AMP-binding enzyme C-terminal domain EP12_12820 PF00561 alpha/beta hydrolase fold EP12_12835 PF00814 Glycoprotease family EP12_12840 PF13307 Helicase C-terminal domain EP12_12855 PF01963 EP12_12855 EP12_12885 PF01634 ATP phosphoribosyltransferase EP12_12885 PF08029 HisG, C-terminal domain EP12_12900 PF00475 Imidazoleglycerol-phosphate dehydratase EP12_12900 PF08645 Polynucleotide kinase 3 phosphatase EP12_12910 PF00977 Histidine biosynthesis protein EP12_12915 PF00977 Histidine biosynthesis protein EP12_12920 PF01502 Phosphoribosyl-AMP cyclohydrolase EP12_12920 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EP12_12950 PF00593 TonB dependent receptor EP12_12950 PF07715 TonB-dependent Receptor Plug Domain EP12_12955 PF01124 MAPEG family EP12_12960 PF00406 Adenylate kinase EP12_12960 PF05191 Adenylate kinase, active site lid EP12_12965 PF00183 Hsp90 protein EP12_12965 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_12970 PF02132 RecR protein EP12_12970 PF13662 Toprim domain EP12_12985 PF02575 YbaB/EbfC DNA-binding family EP12_12990 PF12169 DNA polymerase III subunits gamma and tau domain III EP12_12990 PF12170 DNA polymerase III tau subunit V interacting with alpha EP12_12990 PF13177 DNA polymerase III, delta subunit EP12_12995 PF00156 Phosphoribosyl transferase domain EP12_13000 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) EP12_13005 PF05114 Protein of unknown function (DUF692) EP12_13015 PF00486 Transcriptional regulatory protein, C terminal EP12_13015 PF06552 Plant specific mitochondrial import receptor subunit TOM20 EP12_13020 PF08985 Domain of unknown function (DUF1888) EP12_13025 PF00990 GGDEF domain EP12_13025 PF13426 PAS domain EP12_13065 PF07719 Tetratricopeptide repeat EP12_13065 PF13432 Tetratricopeptide repeat EP12_13065 PF14559 Tetratricopeptide repeat EP12_13070 PF00004 ATPase family associated with various cellular activities (AAA) EP12_13070 PF02861 Clp amino terminal domain EP12_13070 PF07724 AAA domain (Cdc48 subfamily) EP12_13070 PF10431 C-terminal, D2-small domain, of ClpB protein EP12_13075 PF02578 Multi-copper polyphenol oxidoreductase laccase EP12_13080 PF00849 RNA pseudouridylate synthase EP12_13080 PF01479 S4 domain EP12_13085 PF13525 Outer membrane lipoprotein EP12_13090 PF12973 ChrR Cupin-like domain EP12_13095 PF04542 Sigma-70 region 2 EP12_13095 PF08281 Sigma-70, region 4 EP12_13100 PF02190 ATP-dependent protease La (LON) domain EP12_13105 PF12680 SnoaL-like domain EP12_13110 PF00106 short chain dehydrogenase EP12_13115 PF01593 Flavin containing amine oxidoreductase EP12_13120 PF07103 EP12_13120 EP12_13130 PF00691 OmpA family EP12_13130 PF13677 EP12_13130 EP12_13135 PF01618 EP12_13135 EP12_13140 PF02609 Exonuclease VII small subunit EP12_13145 PF00348 Polyprenyl synthetase EP12_13150 PF02779 Transketolase, pyrimidine binding domain EP12_13150 PF02780 Transketolase, C-terminal domain EP12_13150 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EP12_13155 PF04608 Phosphatidylglycerophosphatase A EP12_13160 PF00586 AIR synthase related protein, N-terminal domain EP12_13160 PF02769 AIR synthase related protein, C-terminal domain EP12_13165 PF01029 NusB family EP12_13170 PF00885 6,7-dimethyl-8-ribityllumazine synthase EP12_13175 PF00925 GTP cyclohydrolase II EP12_13175 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EP12_13180 PF00677 Lumazine binding domain EP12_13185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EP12_13185 PF01872 RibD C-terminal domain EP12_13190 PF03477 ATP cone domain EP12_13195 PF00464 Serine hydroxymethyltransferase EP12_13200 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_13200 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EP12_13210 PF07238 PilZ domain EP12_13215 PF13481 AAA domain EP12_13215 PF13541 Subunit ChlI of Mg-chelatase EP12_13220 PF07238 PilZ domain EP12_13225 PF12710 haloacid dehalogenase-like hydrolase EP12_13235 PF01026 TatD related DNase EP12_13240 PF01243 Pyridoxamine 5'-phosphate oxidase EP12_13240 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EP12_13245 PF01926 50S ribosome-binding GTPase EP12_13245 PF07650 KH domain EP12_13250 PF00035 Double-stranded RNA binding motif EP12_13250 PF14622 Ribonuclease-III-like EP12_13255 PF00717 Peptidase S24-like EP12_13255 PF10502 Signal peptidase, peptidase S26 EP12_13260 PF00009 Elongation factor Tu GTP binding domain EP12_13260 PF00679 Elongation factor G C-terminus EP12_13260 PF03144 Elongation factor Tu domain 2 EP12_13260 PF06421 GTP-binding protein LepA C-terminus EP12_13265 PF04246 EP12_13265 EP12_13270 PF03888 MucB/RseB family EP12_13270 PF17188 EP12_13270 EP12_13275 PF03872 Anti sigma-E protein RseA, N-terminal domain EP12_13275 PF03873 Anti sigma-E protein RseA, C-terminal domain EP12_13280 PF04542 Sigma-70 region 2 EP12_13280 PF08281 Sigma-70, region 4 EP12_13290 PF01575 MaoC like domain EP12_13300 PF03937 Flavinator of succinate dehydrogenase EP12_13305 PF01571 Aminomethyltransferase folate-binding domain EP12_13310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_13315 PF00543 Nitrogen regulatory protein P-II EP12_13320 PF02540 NAD synthase EP12_13325 PF12019 Type II transport protein GspH EP12_13335 PF12019 Type II transport protein GspH EP12_13340 PF07963 Prokaryotic N-terminal methylation motif EP12_13355 PF07963 Prokaryotic N-terminal methylation motif EP12_13355 PF16732 EP12_13355 EP12_13360 PF05567 Neisseria PilC beta-propeller domain EP12_13365 PF14341 EP12_13365 EP12_13380 PF02401 LytB protein EP12_13385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_13390 PF01252 EP12_13390 EP12_13400 PF01687 Riboflavin kinase EP12_13400 PF06574 FAD synthetase EP12_13405 PF03023 EP12_13405 EP12_13410 PF01649 Ribosomal protein S20 EP12_13415 PF00106 short chain dehydrogenase EP12_13420 PF00149 Calcineurin-like phosphoesterase EP12_13425 PF01553 Acyltransferase EP12_13425 PF13444 Acetyltransferase (GNAT) domain EP12_13430 PF01546 Peptidase family M20/M25/M40 EP12_13430 PF07687 Peptidase dimerisation domain EP12_13440 PF13616 PPIC-type PPIASE domain EP12_13440 PF13624 SurA N-terminal domain EP12_13445 PF00216 Bacterial DNA-binding protein EP12_13450 PF00004 ATPase family associated with various cellular activities (AAA) EP12_13450 PF02190 ATP-dependent protease La (LON) domain EP12_13450 PF05362 Lon protease (S16) C-terminal proteolytic domain EP12_13455 PF06689 ClpX C4-type zinc finger EP12_13455 PF07724 AAA domain (Cdc48 subfamily) EP12_13455 PF10431 C-terminal, D2-small domain, of ClpB protein EP12_13460 PF00574 Clp protease EP12_13465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_13465 PF05697 Bacterial trigger factor protein (TF) EP12_13465 PF05698 Bacterial trigger factor protein (TF) C-terminus EP12_13495 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EP12_13495 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EP12_13500 PF07209 EP12_13500 EP12_13505 PF01980 Uncharacterised protein family UPF0066 EP12_13510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EP12_13510 PF03129 Anticodon binding domain EP12_13510 PF04073 Aminoacyl-tRNA editing domain EP12_13520 PF02253 Phospholipase A1 EP12_13525 PF00850 Histone deacetylase domain EP12_13535 PF00117 Glutamine amidotransferase class-I EP12_13535 PF00958 GMP synthase C terminal domain EP12_13535 PF02540 NAD synthase EP12_13540 PF00478 IMP dehydrogenase / GMP reductase domain EP12_13540 PF00571 CBS domain EP12_13545 PF02601 EP12_13545 EP12_13545 PF13742 EP12_13545 EP12_13560 PF13360 PQQ-like domain EP12_13565 PF09976 Tetratricopeptide repeat EP12_13570 PF03129 Anticodon binding domain EP12_13570 PF13393 Histidyl-tRNA synthetase EP12_13575 PF04551 GcpE protein EP12_13585 PF01476 LysM domain EP12_13585 PF13424 Tetratricopeptide repeat EP12_13585 PF13432 Tetratricopeptide repeat EP12_13590 PF04055 Radical SAM superfamily EP12_13595 PF00334 Nucleoside diphosphate kinase EP12_13600 PF02657 Fe-S metabolism associated domain EP12_13605 PF01883 Domain of unknown function DUF59 EP12_13610 PF01521 Iron-sulphur cluster biosynthesis EP12_13615 PF00266 Aminotransferase class-V EP12_13620 PF01458 Uncharacterized protein family (UPF0051) EP12_13625 PF00005 ABC transporter EP12_13635 PF00266 Aminotransferase class-V EP12_13640 PF02082 Transcriptional regulator EP12_13645 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_13650 PF00588 SpoU rRNA Methylase family EP12_13655 PF00459 Inositol monophosphatase family EP12_13660 PF01757 EP12_13660 EP12_13665 PF04397 LytTr DNA-binding domain EP12_13670 PF02355 Protein export membrane protein EP12_13670 PF07549 SecD/SecF GG Motif EP12_13675 PF02355 Protein export membrane protein EP12_13675 PF07549 SecD/SecF GG Motif EP12_13675 PF13721 SecD export protein N-terminal TM region EP12_13680 PF02699 Preprotein translocase subunit EP12_13685 PF01702 Queuine tRNA-ribosyltransferase EP12_13690 PF02547 Queuosine biosynthesis protein EP12_13700 PF09938 EP12_13700 EP12_13705 PF04012 EP12_13705 EP12_13710 PF07885 Ion channel EP12_13715 PF10679 EP12_13715 EP12_13720 PF03994 EP12_13720 EP12_13725 PF06693 EP12_13725 EP12_13730 PF03738 Glutathionylspermidine synthase preATP-grasp EP12_13735 PF01694 Rhomboid family EP12_13745 PF04960 Glutaminase EP12_13750 PF00245 Alkaline phosphatase EP12_13760 PF00463 Isocitrate lyase family EP12_13765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_13765 PF03466 LysR substrate binding domain EP12_13770 PF01274 Malate synthase EP12_13775 PF14907 Uncharacterised nucleotidyltransferase EP12_13795 PF01565 FAD binding domain EP12_13805 PF13444 Acetyltransferase (GNAT) domain EP12_13810 PF02698 DUF218 domain EP12_13815 PF13480 Acetyltransferase (GNAT) domain EP12_13820 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_13825 PF13692 Glycosyl transferases group 1 EP12_13835 PF00535 Glycosyl transferase family 2 EP12_13840 PF00534 Glycosyl transferases group 1 EP12_13840 PF13439 Glycosyltransferase Family 4 EP12_13850 PF13480 Acetyltransferase (GNAT) domain EP12_13855 PF00733 Asparagine synthase EP12_13855 PF13537 Glutamine amidotransferase domain EP12_13865 PF00534 Glycosyl transferases group 1 EP12_13865 PF13439 Glycosyltransferase Family 4 EP12_13875 PF04932 EP12_13875 EP12_13885 PF13440 EP12_13885 EP12_13895 PF00657 GDSL-like Lipase/Acylhydrolase EP12_13900 PF00535 Glycosyl transferase family 2 EP12_13925 PF00534 Glycosyl transferases group 1 EP12_13925 PF13439 Glycosyltransferase Family 4 EP12_13930 PF00534 Glycosyl transferases group 1 EP12_13930 PF13439 Glycosyltransferase Family 4 EP12_13945 PF01522 Polysaccharide deacetylase EP12_13945 PF11959 EP12_13945 EP12_13950 PF02397 EP12_13950 EP12_13955 PF02563 Polysaccharide biosynthesis/export protein EP12_13955 PF10531 SLBB domain EP12_13960 PF02706 Chain length determinant protein EP12_13965 PF13614 AAA domain EP12_13975 PF13401 AAA domain EP12_13980 PF00294 pfkB family carbohydrate kinase EP12_13980 PF01467 Cytidylyltransferase EP12_13985 PF01541 GIY-YIG catalytic domain EP12_13990 PF03994 EP12_13990 EP12_14000 PF10671 Toxin co-regulated pilus biosynthesis protein Q EP12_14005 PF03279 EP12_14005 EP12_14010 PF11280 EP12_14010 EP12_14015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_14015 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_14015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_14015 PF09317 EP12_14015 EP12_14025 PF00593 TonB dependent receptor EP12_14025 PF07715 TonB-dependent Receptor Plug Domain EP12_14030 PF00563 EAL domain EP12_14030 PF00990 GGDEF domain EP12_14035 PF00265 Thymidine kinase EP12_14040 PF00356 Bacterial regulatory proteins, lacI family EP12_14040 PF13377 Periplasmic binding protein-like domain EP12_14045 PF14681 Uracil phosphoribosyltransferase EP12_14050 PF13744 Helix-turn-helix domain EP12_14065 PF11075 EP12_14065 EP12_14070 PF01841 Transglutaminase-like superfamily EP12_14080 PF01926 50S ribosome-binding GTPase EP12_14085 PF00588 SpoU rRNA Methylase family EP12_14085 PF08032 RNA 2'-O ribose methyltransferase substrate binding EP12_14100 PF12833 Helix-turn-helix domain EP12_14110 PF07638 ECF sigma factor EP12_14115 PF00378 Enoyl-CoA hydratase/isomerase family EP12_14120 PF06127 EP12_14120 EP12_14130 PF05971 Protein of unknown function (DUF890) EP12_14145 PF08223 PaaX-like protein C-terminal domain EP12_14155 PF11075 EP12_14155 EP12_14160 PF05359 EP12_14160 EP12_14165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_14170 PF07308 EP12_14170 EP12_14175 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_14175 PF01799 [2Fe-2S] binding domain EP12_14180 PF00941 FAD binding domain in molybdopterin dehydrogenase EP12_14180 PF03450 CO dehydrogenase flavoprotein C-terminal domain EP12_14185 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EP12_14185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EP12_14190 PF00881 Nitroreductase family EP12_14195 PF01295 EP12_14195 EP12_14195 PF12633 EP12_14195 EP12_14205 PF00144 Beta-lactamase EP12_14210 PF06172 Cupin superfamily (DUF985) EP12_14230 PF01738 Dienelactone hydrolase family EP12_14240 PF00128 Alpha amylase, catalytic domain EP12_14250 PF01965 DJ-1/PfpI family EP12_14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_14265 PF03466 LysR substrate binding domain EP12_14275 PF01979 Amidohydrolase family EP12_14285 PF04542 Sigma-70 region 2 EP12_14285 PF08281 Sigma-70, region 4 EP12_14300 PF00149 Calcineurin-like phosphoesterase EP12_14310 PF00593 TonB dependent receptor EP12_14310 PF07715 TonB-dependent Receptor Plug Domain EP12_14315 PF07660 Secretin and TonB N terminus short domain EP12_14315 PF07715 TonB-dependent Receptor Plug Domain EP12_14325 PF08281 Sigma-70, region 4 EP12_14330 PF03631 EP12_14330 EP12_14335 PF00072 Response regulator receiver domain EP12_14335 PF00196 Bacterial regulatory proteins, luxR family EP12_14340 PF07730 Histidine kinase EP12_14350 PF03055 Retinal pigment epithelial membrane protein EP12_14355 PF00593 TonB dependent receptor EP12_14355 PF07715 TonB-dependent Receptor Plug Domain EP12_14365 PF03567 Sulfotransferase family EP12_14370 PF08888 HopJ type III effector protein EP12_14375 PF03965 Penicillinase repressor EP12_14380 PF03544 Gram-negative bacterial TonB protein C-terminal EP12_14380 PF05569 BlaR1 peptidase M56 EP12_14385 PF00578 AhpC/TSA family EP12_14395 PF01047 MarR family EP12_14400 PF06707 Protein of unknown function (DUF1194) EP12_14405 PF07152 YaeQ protein EP12_14415 PF00083 Sugar (and other) transporter EP12_14420 PF06283 Trehalose utilisation EP12_14425 PF12833 Helix-turn-helix domain EP12_14425 PF13377 Periplasmic binding protein-like domain EP12_14435 PF00331 Glycosyl hydrolase family 10 EP12_14440 PF13347 MFS/sugar transport protein EP12_14445 PF04616 Glycosyl hydrolases family 43 EP12_14450 PF00331 Glycosyl hydrolase family 10 EP12_14460 PF00456 Transketolase, thiamine diphosphate binding domain EP12_14460 PF02779 Transketolase, pyrimidine binding domain EP12_14460 PF02780 Transketolase, C-terminal domain EP12_14470 PF04616 Glycosyl hydrolases family 43 EP12_14480 PF00923 Transaldolase EP12_14500 PF00881 Nitroreductase family EP12_14505 PF00107 Zinc-binding dehydrogenase EP12_14515 PF01797 Transposase IS200 like EP12_14520 PF00270 DEAD/DEAH box helicase EP12_14520 PF00271 Helicase conserved C-terminal domain EP12_14520 PF16124 EP12_14520 EP12_14525 PF00561 alpha/beta hydrolase fold EP12_14535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EP12_14545 PF00072 Response regulator receiver domain EP12_14545 PF00512 His Kinase A (phospho-acceptor) domain EP12_14545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_14545 PF13424 Tetratricopeptide repeat EP12_14550 PF04542 Sigma-70 region 2 EP12_14550 PF08281 Sigma-70, region 4 EP12_14560 PF02566 OsmC-like protein EP12_14565 PF01625 Peptide methionine sulfoxide reductase EP12_14570 PF00072 Response regulator receiver domain EP12_14570 PF00512 His Kinase A (phospho-acceptor) domain EP12_14570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_14575 PF01433 Peptidase family M1 EP12_14580 PF00005 ABC transporter EP12_14585 PF00270 DEAD/DEAH box helicase EP12_14585 PF00271 Helicase conserved C-terminal domain EP12_14590 PF11215 EP12_14590 EP12_14600 PF00596 Class II Aldolase and Adducin N-terminal domain EP12_14610 PF07804 HipA-like C-terminal domain EP12_14610 PF13657 HipA N-terminal domain EP12_14615 PF01381 Helix-turn-helix EP12_14625 PF03786 D-mannonate dehydratase (UxuA) EP12_14640 PF02661 Fic/DOC family EP12_14650 PF00665 Integrase core domain EP12_14655 PF09618 CRISPR-associated protein (Cas_Csy4) EP12_14670 PF09614 EP12_14670 EP12_14675 PF09611 EP12_14675 EP12_14690 PF01867 CRISPR associated protein Cas1 EP12_14695 PF13280 EP12_14695 EP12_14710 PF00589 Phage integrase family EP12_14715 PF02486 EP12_14715 EP12_14730 PF00403 Heavy-metal-associated domain EP12_14735 PF02411 EP12_14735 EP12_14740 PF00376 MerR family regulatory protein EP12_14740 PF09278 MerR, DNA binding EP12_14750 PF02347 Glycine cleavage system P-protein EP12_14755 PF01597 Glycine cleavage H-protein EP12_14760 PF01571 Aminomethyltransferase folate-binding domain EP12_14760 PF08669 Glycine cleavage T-protein C-terminal barrel domain EP12_14765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_14765 PF03466 LysR substrate binding domain EP12_14770 PF00557 Metallopeptidase family M24 EP12_14770 PF01321 Creatinase/Prolidase N-terminal domain EP12_14775 PF00892 EamA-like transporter family EP12_14780 PF01494 FAD binding domain EP12_14785 PF01494 FAD binding domain EP12_14790 PF00557 Metallopeptidase family M24 EP12_14790 PF05195 Aminopeptidase P, N-terminal domain EP12_14795 PF03695 Uncharacterised protein family (UPF0149) EP12_14800 PF00294 pfkB family carbohydrate kinase EP12_14805 PF01156 Inosine-uridine preferring nucleoside hydrolase EP12_14810 PF01812 5-formyltetrahydrofolate cyclo-ligase family EP12_14815 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EP12_14820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP12_14820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EP12_14825 PF04338 Protein of unknown function, DUF481 EP12_14830 PF04338 Protein of unknown function, DUF481 EP12_14835 PF08668 HDOD domain EP12_14850 PF16576 EP12_14850 EP12_14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_14855 PF03466 LysR substrate binding domain EP12_14860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP12_14860 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_14865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EP12_14865 PF00364 Biotin-requiring enzyme EP12_14865 PF02817 e3 binding domain EP12_14870 PF00456 Transketolase, thiamine diphosphate binding domain EP12_14880 PF00392 Bacterial regulatory proteins, gntR family EP12_14880 PF07729 FCD domain EP12_14885 PF17113 EP12_14885 EP12_14895 PF13975 EP12_14895 EP12_14900 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EP12_14900 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EP12_14905 PF00114 Pilin (bacterial filament) EP12_14905 PF07963 Prokaryotic N-terminal methylation motif EP12_14910 PF00482 Type II secretion system (T2SS), protein F EP12_14915 PF01478 Type IV leader peptidase family EP12_14915 PF06750 EP12_14915 EP12_14920 PF01121 Dephospho-CoA kinase EP12_14925 PF07072 Protein of unknown function (DUF1342) EP12_14930 PF03884 Domain of unknown function (DUF329) EP12_14940 PF00356 Bacterial regulatory proteins, lacI family EP12_14940 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EP12_14945 PF01306 LacY proton/sugar symporter EP12_14955 PF00083 Sugar (and other) transporter EP12_14960 PF07980 SusD family EP12_14960 PF14322 Starch-binding associating with outer membrane EP12_14970 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EP12_14975 PF00293 NUDIX domain EP12_14985 PF01551 Peptidase family M23 EP12_14990 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EP12_14995 PF00091 Tubulin/FtsZ family, GTPase domain EP12_14995 PF12327 FtsZ family, C-terminal domain EP12_15000 PF02491 SHS2 domain inserted in FTSA EP12_15000 PF14450 Cell division protein FtsA EP12_15005 PF03799 Cell division protein FtsQ EP12_15005 PF08478 POTRA domain, FtsQ-type EP12_15010 PF01820 D-ala D-ala ligase N-terminus EP12_15010 PF07478 D-ala D-ala ligase C-terminus EP12_15015 PF01225 Mur ligase family, catalytic domain EP12_15015 PF02875 Mur ligase family, glutamate ligase domain EP12_15015 PF08245 Mur ligase middle domain EP12_15025 PF01098 EP12_15025 EP12_15030 PF02875 Mur ligase family, glutamate ligase domain EP12_15030 PF08245 Mur ligase middle domain EP12_15040 PF01225 Mur ligase family, catalytic domain EP12_15040 PF02875 Mur ligase family, glutamate ligase domain EP12_15040 PF08245 Mur ligase middle domain EP12_15055 PF04999 EP12_15055 EP12_15060 PF01795 MraW methylase family EP12_15065 PF02381 MraZ protein EP12_15070 PF07277 EP12_15070 EP12_15075 PF01244 Membrane dipeptidase (Peptidase family M19) EP12_15080 PF00873 AcrB/AcrD/AcrF family EP12_15085 PF11604 Copper binding periplasmic protein CusF EP12_15085 PF16576 EP12_15085 EP12_15090 PF02321 Outer membrane efflux protein EP12_15100 PF12146 Putative lysophospholipase EP12_15105 PF00462 Glutaredoxin EP12_15105 PF08534 Redoxin EP12_15120 PF00072 Response regulator receiver domain EP12_15120 PF00158 Sigma-54 interaction domain EP12_15120 PF02954 Bacterial regulatory protein, Fis family EP12_15125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_15130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EP12_15130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EP12_15140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EP12_15140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EP12_15155 PF00593 TonB dependent receptor EP12_15155 PF07715 TonB-dependent Receptor Plug Domain EP12_15170 PF01435 Peptidase family M48 EP12_15175 PF00924 Mechanosensitive ion channel EP12_15185 PF04452 RNA methyltransferase EP12_15195 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EP12_15195 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EP12_15200 PF02622 Uncharacterized ACR, COG1678 EP12_15205 PF03652 Uncharacterised protein family (UPF0081) EP12_15210 PF09413 Domain of unknown function (DUF2007) EP12_15215 PF00437 Type II/IV secretion system protein EP12_15220 PF00437 Type II/IV secretion system protein EP12_15225 PF01168 Alanine racemase, N-terminal domain EP12_15230 PF03807 NADP oxidoreductase coenzyme F420-dependent EP12_15230 PF14748 Pyrroline-5-carboxylate reductase dimerisation EP12_15235 PF02325 EP12_15235 EP12_15240 PF14467 Domain of unknown function (DUF4426) EP12_15260 PF08787 Alginate lyase EP12_15265 PF04239 Protein of unknown function (DUF421) EP12_15270 PF05437 EP12_15270 EP12_15275 PF03591 EP12_15275 EP12_15280 PF01381 Helix-turn-helix EP12_15280 PF07883 Cupin domain EP12_15290 PF03883 EP12_15290 EP12_15295 PF00923 Transaldolase EP12_15300 PF00342 Phosphoglucose isomerase EP12_15310 PF03167 Uracil DNA glycosylase superfamily EP12_15315 PF00291 Pyridoxal-phosphate dependent enzyme EP12_15315 PF14821 Threonine synthase N terminus EP12_15320 PF00288 GHMP kinases N terminal domain EP12_15320 PF08544 GHMP kinases C terminal EP12_15325 PF00696 Amino acid kinase family EP12_15325 PF00742 Homoserine dehydrogenase EP12_15325 PF01842 ACT domain EP12_15325 PF03447 Homoserine dehydrogenase, NAD binding domain EP12_15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_15330 PF03466 LysR substrate binding domain EP12_15335 PF00107 Zinc-binding dehydrogenase EP12_15335 PF08240 Alcohol dehydrogenase GroES-like domain EP12_15345 PF01022 Bacterial regulatory protein, arsR family EP12_15350 PF01451 Low molecular weight phosphotyrosine protein phosphatase EP12_15355 PF03358 NADPH-dependent FMN reductase EP12_15360 PF01758 Sodium Bile acid symporter family EP12_15365 PF00072 Response regulator receiver domain EP12_15370 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) EP12_15375 PF00072 Response regulator receiver domain EP12_15375 PF00486 Transcriptional regulatory protein, C terminal EP12_15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_15385 PF12915 EP12_15385 EP12_15390 PF16036 EP12_15390 EP12_15395 PF00291 Pyridoxal-phosphate dependent enzyme EP12_15405 PF03435 Saccharopine dehydrogenase EP12_15405 PF16653 EP12_15405 EP12_15410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EP12_15420 PF00990 GGDEF domain EP12_15420 PF07494 Two component regulator propeller EP12_15420 PF07495 Y_Y_Y domain EP12_15425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EP12_15430 PF04348 LppC putative lipoprotein EP12_15435 PF02021 Uncharacterised protein family UPF0102 EP12_15440 PF13580 SIS domain EP12_15445 PF04972 BON domain EP12_15450 PF07690 Major Facilitator Superfamily EP12_15455 PF00593 TonB dependent receptor EP12_15455 PF07715 TonB-dependent Receptor Plug Domain EP12_15465 PF00392 Bacterial regulatory proteins, gntR family EP12_15465 PF07729 FCD domain EP12_15470 PF13714 Phosphoenolpyruvate phosphomutase EP12_15475 PF00285 Citrate synthase EP12_15485 PF04303 PrpF protein EP12_15490 PF00072 Response regulator receiver domain EP12_15490 PF00990 GGDEF domain EP12_15495 PF00474 Sodium:solute symporter family EP12_15500 PF03703 EP12_15500 EP12_15505 PF03703 EP12_15505 EP12_15510 PF00072 Response regulator receiver domain EP12_15510 PF00512 His Kinase A (phospho-acceptor) domain EP12_15510 PF01627 Hpt domain EP12_15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_15510 PF08448 PAS fold EP12_15515 PF01510 N-acetylmuramoyl-L-alanine amidase EP12_15515 PF08239 Bacterial SH3 domain EP12_15525 PF00310 Glutamine amidotransferases class-II EP12_15525 PF01493 GXGXG motif EP12_15525 PF01645 Conserved region in glutamate synthase EP12_15525 PF04898 Glutamate synthase central domain EP12_15530 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_15530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EP12_15540 PF10881 EP12_15540 EP12_15545 PF01048 Phosphorylase superfamily EP12_15550 PF03186 EP12_15550 EP12_15570 PF07715 TonB-dependent Receptor Plug Domain EP12_15575 PF02502 Ribose/Galactose Isomerase EP12_15575 PF12408 Ribose-5-phosphate isomerase EP12_15585 PF01070 FMN-dependent dehydrogenase EP12_15590 PF01261 Xylose isomerase-like TIM barrel EP12_15595 PF00106 short chain dehydrogenase EP12_15595 PF00596 Class II Aldolase and Adducin N-terminal domain EP12_15595 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_15600 PF00455 EP12_15600 EP12_15600 PF08220 DeoR-like helix-turn-helix domain EP12_15605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EP12_15610 PF00294 pfkB family carbohydrate kinase EP12_15620 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_15625 PF14583 Oligogalacturonate lyase EP12_15630 PF13347 MFS/sugar transport protein EP12_15635 PF07470 Glycosyl Hydrolase Family 88 EP12_15645 PF09224 Domain of unknown function (DUF1961) EP12_15650 PF05336 Domain of unknown function (DUF718) EP12_15660 PF13229 Right handed beta helix region EP12_15665 PF00581 Rhodanese-like domain EP12_15670 PF11026 EP12_15670 EP12_15675 PF07237 Protein of unknown function (DUF1428) EP12_15680 PF00579 tRNA synthetases class I (W and Y) EP12_15685 PF01551 Peptidase family M23 EP12_15685 PF04225 Opacity-associated protein A LysM-like domain EP12_15685 PF08525 EP12_15685 EP12_15690 PF03702 Uncharacterised protein family (UPF0075) EP12_15695 PF00072 Response regulator receiver domain EP12_15695 PF01966 HD domain EP12_15710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EP12_15715 PF08327 Activator of Hsp90 ATPase homolog 1-like protein EP12_15720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EP12_15725 PF13417 Glutathione S-transferase, N-terminal domain EP12_15730 PF01521 Iron-sulphur cluster biosynthesis EP12_15735 PF01381 Helix-turn-helix EP12_15745 PF03976 Polyphosphate kinase 2 (PPK2) EP12_15750 PF03776 Septum formation topological specificity factor MinE EP12_15755 PF13614 AAA domain EP12_15760 PF03775 Septum formation inhibitor MinC, C-terminal domain EP12_15760 PF05209 Septum formation inhibitor MinC, N-terminal domain EP12_15765 PF00206 Lyase EP12_15765 PF10415 Fumarase C C-terminus EP12_15770 PF00127 Copper binding proteins, plastocyanin/azurin family EP12_15775 PF11449 EP12_15775 EP12_15785 PF00654 Voltage gated chloride channel EP12_15790 PF03653 EP12_15790 EP12_15800 PF03695 Uncharacterised protein family (UPF0149) EP12_15805 PF01566 EP12_15805 EP12_15815 PF00072 Response regulator receiver domain EP12_15825 PF00009 Elongation factor Tu GTP binding domain EP12_15825 PF00679 Elongation factor G C-terminus EP12_15825 PF03144 Elongation factor Tu domain 2 EP12_15830 PF00120 Glutamine synthetase, catalytic domain EP12_15830 PF03951 Glutamine synthetase, beta-Grasp domain EP12_15840 PF00512 His Kinase A (phospho-acceptor) domain EP12_15840 PF00989 PAS fold EP12_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_15845 PF00072 Response regulator receiver domain EP12_15845 PF00158 Sigma-54 interaction domain EP12_15845 PF02954 Bacterial regulatory protein, Fis family EP12_15850 PF01627 Hpt domain EP12_15850 PF13487 HD domain EP12_15855 PF01553 Acyltransferase EP12_15860 PF06877 Regulator of ribonuclease activity B EP12_15875 PF13416 Bacterial extracellular solute-binding protein EP12_15880 PF00072 Response regulator receiver domain EP12_15880 PF00512 His Kinase A (phospho-acceptor) domain EP12_15880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_15885 PF00133 tRNA synthetases class I (I, L, M and V) EP12_15885 PF08264 Anticodon-binding domain of tRNA EP12_15885 PF10458 Valyl tRNA synthetase tRNA binding arm EP12_15890 PF04364 DNA polymerase III chi subunit, HolC EP12_15895 PF00883 Cytosol aminopeptidase family, catalytic domain EP12_15895 PF02789 Cytosol aminopeptidase family, N-terminal domain EP12_15905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_15910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_15910 PF02743 Cache domain EP12_15915 PF00274 Fructose-bisphosphate aldolase class-I EP12_15920 PF13609 Gram-negative porin EP12_15925 PF01547 Bacterial extracellular solute-binding protein EP12_15930 PF09928 EP12_15930 EP12_15935 PF00528 Binding-protein-dependent transport system inner membrane component EP12_15940 PF00528 Binding-protein-dependent transport system inner membrane component EP12_15945 PF00005 ABC transporter EP12_15950 PF00005 ABC transporter EP12_15955 PF00158 Sigma-54 interaction domain EP12_15955 PF02954 Bacterial regulatory protein, Fis family EP12_15960 PF00121 Triosephosphate isomerase EP12_15965 PF00316 Fructose-1-6-bisphosphatase EP12_15970 PF00316 Fructose-1-6-bisphosphatase EP12_15975 PF01266 FAD dependent oxidoreductase EP12_15975 PF16901 EP12_15975 EP12_15980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EP12_15980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EP12_15985 PF00005 ABC transporter EP12_15990 PF01638 HxlR-like helix-turn-helix EP12_16000 PF03739 EP12_16000 EP12_16005 PF03739 EP12_16005 EP12_16010 PF06271 EP12_16010 EP12_16015 PF01614 Bacterial transcriptional regulator EP12_16015 PF09339 IclR helix-turn-helix domain EP12_16035 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_16040 PF07883 Cupin domain EP12_16045 PF05853 Prokaryotic protein of unknown function (DUF849) EP12_16050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EP12_16050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EP12_16055 PF04199 Putative cyclase EP12_16060 PF00593 TonB dependent receptor EP12_16060 PF07715 TonB-dependent Receptor Plug Domain EP12_16075 PF14281 EP12_16075 EP12_16080 PF01042 Endoribonuclease L-PSP EP12_16085 PF07273 Protein of unknown function (DUF1439) EP12_16090 PF02696 EP12_16090 EP12_16110 PF04820 Tryptophan halogenase EP12_16115 PF04820 Tryptophan halogenase EP12_16120 PF00593 TonB dependent receptor EP12_16120 PF07715 TonB-dependent Receptor Plug Domain EP12_16125 PF00392 Bacterial regulatory proteins, gntR family EP12_16125 PF07729 FCD domain EP12_16135 PF00703 Glycosyl hydrolases family 2 EP12_16135 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EP12_16135 PF02837 Glycosyl hydrolases family 2, sugar binding domain EP12_16135 PF16355 EP12_16135 EP12_16140 PF03629 Domain of unknown function (DUF303) EP12_16145 PF00593 TonB dependent receptor EP12_16145 PF07715 TonB-dependent Receptor Plug Domain EP12_16150 PF04820 Tryptophan halogenase EP12_16155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EP12_16155 PF13378 Enolase C-terminal domain-like EP12_16160 PF03648 Glycosyl hydrolase family 67 N-terminus EP12_16160 PF07477 Glycosyl hydrolase family 67 C-terminus EP12_16160 PF07488 Glycosyl hydrolase family 67 middle domain EP12_16175 PF03572 Peptidase family S41 EP12_16175 PF07676 WD40-like Beta Propeller Repeat EP12_16175 PF14684 Tricorn protease C1 domain EP12_16175 PF14685 Tricorn protease PDZ domain EP12_16180 PF13620 Carboxypeptidase regulatory-like domain EP12_16190 PF12770 EP12_16190 EP12_16200 PF03098 Animal haem peroxidase EP12_16210 PF04542 Sigma-70 region 2 EP12_16215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_16215 PF08448 PAS fold EP12_16215 PF13426 PAS domain EP12_16220 PF00375 Sodium:dicarboxylate symporter family EP12_16230 PF00593 TonB dependent receptor EP12_16230 PF07715 TonB-dependent Receptor Plug Domain EP12_16240 PF01032 FecCD transport family EP12_16250 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EP12_16250 PF05221 S-adenosyl-L-homocysteine hydrolase EP12_16265 PF01566 EP12_16265 EP12_16270 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_16275 PF00593 TonB dependent receptor EP12_16275 PF07715 TonB-dependent Receptor Plug Domain EP12_16280 PF08787 Alginate lyase EP12_16285 PF00356 Bacterial regulatory proteins, lacI family EP12_16285 PF13377 Periplasmic binding protein-like domain EP12_16290 PF03547 EP12_16290 EP12_16300 PF03403 Platelet-activating factor acetylhydrolase, isoform II EP12_16305 PF13419 Haloacid dehalogenase-like hydrolase EP12_16325 PF12146 Putative lysophospholipase EP12_16330 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EP12_16330 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain EP12_16335 PF01433 Peptidase family M1 EP12_16340 PF00005 ABC transporter EP12_16355 PF13561 Enoyl-(Acyl carrier protein) reductase EP12_16365 PF00270 DEAD/DEAH box helicase EP12_16365 PF00271 Helicase conserved C-terminal domain EP12_16370 PF01081 KDPG and KHG aldolase EP12_16375 PF00294 pfkB family carbohydrate kinase EP12_16385 PF00392 Bacterial regulatory proteins, gntR family EP12_16385 PF07729 FCD domain EP12_16390 PF00924 Mechanosensitive ion channel EP12_16410 PF00141 Peroxidase EP12_16415 PF13505 Outer membrane protein beta-barrel domain EP12_16420 PF00999 Sodium/hydrogen exchanger family EP12_16420 PF02254 TrkA-N domain EP12_16425 PF00990 GGDEF domain EP12_16430 PF00614 Phospholipase D Active site motif EP12_16430 PF09335 EP12_16430 EP12_16430 PF13091 PLD-like domain EP12_16435 PF03372 Endonuclease/Exonuclease/phosphatase family EP12_16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_16440 PF03466 LysR substrate binding domain EP12_16450 PF01925 EP12_16450 EP12_16455 PF00155 Aminotransferase class I and II EP12_16460 PF00072 Response regulator receiver domain EP12_16465 PF04509 CheC-like family EP12_16465 PF13690 Chemotaxis phosphatase CheX EP12_16475 PF00136 DNA polymerase family B EP12_16475 PF03104 DNA polymerase family B, exonuclease domain EP12_16480 PF13202 EF hand EP12_16500 PF00076 RNA recognition motif EP12_16510 PF05958 tRNA (Uracil-5-)-methyltransferase EP12_16515 PF00440 Bacterial regulatory proteins, tetR family EP12_16520 PF00487 EP12_16520 EP12_16525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP12_16525 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_16535 PF03167 Uracil DNA glycosylase superfamily EP12_16540 PF00072 Response regulator receiver domain EP12_16540 PF00563 EAL domain EP12_16540 PF00990 GGDEF domain EP12_16540 PF11849 EP12_16540 EP12_16545 PF10987 EP12_16545 EP12_16550 PF01507 Phosphoadenosine phosphosulfate reductase family EP12_16555 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EP12_16555 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EP12_16560 PF00175 Oxidoreductase NAD-binding domain EP12_16560 PF00258 Flavodoxin EP12_16560 PF00667 FAD binding domain EP12_16580 PF04024 EP12_16580 EP12_16585 PF04012 EP12_16585 EP12_16600 PF01207 Dihydrouridine synthase (Dus) EP12_16610 PF09952 EP12_16610 EP12_16620 PF13454 FAD-NAD(P)-binding EP12_16630 PF00691 OmpA family EP12_16635 PF00071 Ras family EP12_16645 PF00756 Putative esterase EP12_16650 PF01553 Acyltransferase EP12_16655 PF01553 Acyltransferase EP12_16670 PF11101 EP12_16670 EP12_16675 PF13460 NADH(P)-binding EP12_16680 PF00209 Sodium:neurotransmitter symporter family EP12_16685 PF00106 short chain dehydrogenase EP12_16690 PF04134 EP12_16690 EP12_16695 PF01625 Peptide methionine sulfoxide reductase EP12_16710 PF00258 Flavodoxin EP12_16720 PF02472 Biopolymer transport protein ExbD/TolR EP12_16730 PF05420 EP12_16730 EP12_16735 PF01270 Glycosyl hydrolases family 8 EP12_16740 PF03170 Bacterial cellulose synthase subunit EP12_16755 PF10688 EP12_16755 EP12_16760 PF05175 Methyltransferase small domain EP12_16765 PF13460 NADH(P)-binding EP12_16770 PF00326 Prolyl oligopeptidase family EP12_16770 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EP12_16775 PF08000 Bacterial PH domain EP12_16780 PF00563 EAL domain EP12_16780 PF00990 GGDEF domain EP12_16785 PF00291 Pyridoxal-phosphate dependent enzyme EP12_16790 PF07969 Amidohydrolase family EP12_16795 PF00753 Metallo-beta-lactamase superfamily EP12_16800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_16805 PF03466 LysR substrate binding domain EP12_16830 PF13230 Glutamine amidotransferases class-II EP12_16845 PF06032 Protein of unknown function (DUF917) EP12_16850 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EP12_16855 PF01037 AsnC family EP12_16855 PF13412 Winged helix-turn-helix DNA-binding EP12_16870 PF13437 HlyD family secretion protein EP12_16875 PF00005 ABC transporter EP12_16890 PF09905 Uncharacterized conserved protein (DUF2132) EP12_16895 PF02447 EP12_16895 EP12_16900 PF01202 Shikimate kinase EP12_16905 PF00356 Bacterial regulatory proteins, lacI family EP12_16905 PF13377 Periplasmic binding protein-like domain EP12_16910 PF00753 Metallo-beta-lactamase superfamily EP12_16915 PF07866 Protein of unknown function (DUF1653) EP12_16920 PF00817 impB/mucB/samB family EP12_16920 PF11798 IMS family HHH motif EP12_16920 PF11799 impB/mucB/samB family C-terminal domain EP12_16925 PF04400 EP12_16925 EP12_16935 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_16935 PF00175 Oxidoreductase NAD-binding domain EP12_16935 PF00970 Oxidoreductase FAD-binding domain EP12_16940 PF02508 EP12_16940 EP12_16945 PF02508 EP12_16945 EP12_16955 PF03116 EP12_16955 EP12_16960 PF05896 EP12_16960 EP12_16960 PF11973 EP12_16960 EP12_16965 PF07055 Enoyl reductase FAD binding domain EP12_16965 PF12241 Trans-2-enoyl-CoA reductase catalytic region EP12_16965 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EP12_16970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_16970 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EP12_16975 PF00311 Phosphoenolpyruvate carboxylase EP12_16985 PF00141 Peroxidase EP12_16995 PF00056 lactate/malate dehydrogenase, NAD binding domain EP12_16995 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EP12_17000 PF01316 Arginine repressor, DNA binding domain EP12_17000 PF02863 Arginine repressor, C-terminal domain EP12_17005 PF00593 TonB dependent receptor EP12_17005 PF07715 TonB-dependent Receptor Plug Domain EP12_17020 PF00593 TonB dependent receptor EP12_17020 PF07715 TonB-dependent Receptor Plug Domain EP12_17020 PF13620 Carboxypeptidase regulatory-like domain EP12_17025 PF09084 NMT1/THI5 like EP12_17035 PF00485 Phosphoribulokinase / Uridine kinase family EP12_17040 PF01773 Na+ dependent nucleoside transporter N-terminus EP12_17040 PF07662 Na+ dependent nucleoside transporter C-terminus EP12_17040 PF07670 Nucleoside recognition EP12_17050 PF14559 Tetratricopeptide repeat EP12_17055 PF01124 MAPEG family EP12_17060 PF00929 Exonuclease EP12_17070 PF00474 Sodium:solute symporter family EP12_17075 PF13937 EP12_17075 EP12_17080 PF00072 Response regulator receiver domain EP12_17080 PF00512 His Kinase A (phospho-acceptor) domain EP12_17080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_17080 PF12860 EP12_17080 EP12_17085 PF00924 Mechanosensitive ion channel EP12_17090 PF08443 RimK-like ATP-grasp domain EP12_17095 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EP12_17100 PF05618 Putative ATP-dependant zinc protease EP12_17110 PF00072 Response regulator receiver domain EP12_17110 PF00196 Bacterial regulatory proteins, luxR family EP12_17115 PF00501 AMP-binding enzyme EP12_17115 PF13193 AMP-binding enzyme C-terminal domain EP12_17115 PF16177 EP12_17115 EP12_17125 PF02690 EP12_17125 EP12_17130 PF00248 Aldo/keto reductase family EP12_17140 PF12796 Ankyrin repeats (3 copies) EP12_17140 PF13637 Ankyrin repeats (many copies) EP12_17145 PF00199 Catalase EP12_17145 PF06628 Catalase-related immune-responsive EP12_17155 PF05787 Bacterial protein of unknown function (DUF839) EP12_17240 PF02321 Outer membrane efflux protein EP12_17245 PF16576 EP12_17245 EP12_17250 PF00664 ABC transporter transmembrane region EP12_17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_17255 PF03466 LysR substrate binding domain EP12_17280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EP12_17280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EP12_17280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EP12_17285 PF00535 Glycosyl transferase family 2 EP12_17290 PF16363 EP12_17290 EP12_17295 PF04321 RmlD substrate binding domain EP12_17300 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EP12_17305 PF00483 Nucleotidyl transferase EP12_17315 PF00534 Glycosyl transferases group 1 EP12_17315 PF13439 Glycosyltransferase Family 4 EP12_17320 PF00535 Glycosyl transferase family 2 EP12_17325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EP12_17335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EP12_17355 PF05426 Alginate lyase EP12_17365 PF00793 DAHP synthetase I family EP12_17370 PF02348 Cytidylyltransferase EP12_17370 PF03737 Demethylmenaquinone methyltransferase EP12_17385 PF04765 EP12_17385 EP12_17400 PF00483 Nucleotidyl transferase EP12_17400 PF01050 Mannose-6-phosphate isomerase EP12_17405 PF09851 EP12_17405 EP12_17415 PF01196 Ribosomal protein L17 EP12_17420 PF01000 RNA polymerase Rpb3/RpoA insert domain EP12_17420 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EP12_17420 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EP12_17425 PF00163 Ribosomal protein S4/S9 N-terminal domain EP12_17425 PF01479 S4 domain EP12_17430 PF00411 Ribosomal protein S11 EP12_17435 PF00416 Ribosomal protein S13/S18 EP12_17440 PF00344 SecY translocase EP12_17445 PF00828 Ribosomal protein L18e/L15 EP12_17450 PF00327 Ribosomal protein L30p/L7e EP12_17455 PF00333 Ribosomal protein S5, N-terminal domain EP12_17455 PF03719 Ribosomal protein S5, C-terminal domain EP12_17460 PF00861 Ribosomal L18p/L5e family EP12_17465 PF00347 Ribosomal protein L6 EP12_17470 PF00410 Ribosomal protein S8 EP12_17475 PF00253 Ribosomal protein S14p/S29e EP12_17480 PF00281 Ribosomal protein L5 EP12_17480 PF00673 ribosomal L5P family C-terminus EP12_17485 PF00467 KOW motif EP12_17485 PF17136 EP12_17485 EP12_17490 PF00238 Ribosomal protein L14p/L23e EP12_17505 PF00588 SpoU rRNA Methylase family EP12_17505 PF08032 RNA 2'-O ribose methyltransferase substrate binding EP12_17515 PF09423 PhoD-like phosphatase EP12_17515 PF16655 EP12_17515 EP12_17520 PF00593 TonB dependent receptor EP12_17520 PF07715 TonB-dependent Receptor Plug Domain EP12_17525 PF08238 Sel1 repeat EP12_17530 PF06146 EP12_17530 EP12_17540 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EP12_17545 PF00175 Oxidoreductase NAD-binding domain EP12_17555 PF04389 Peptidase family M28 EP12_17560 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_17565 PF02630 SCO1/SenC EP12_17575 PF14240 EP12_17575 EP12_17590 PF12802 MarR family EP12_17595 PF01654 EP12_17595 EP12_17600 PF02322 EP12_17600 EP12_17615 PF00313 'Cold-shock' DNA-binding domain EP12_17620 PF03109 EP12_17620 EP12_17625 PF02036 SCP-2 sterol transfer family EP12_17630 PF01209 ubiE/COQ5 methyltransferase family EP12_17635 PF03352 Methyladenine glycosylase EP12_17640 PF01432 Peptidase family M3 EP12_17645 PF00072 Response regulator receiver domain EP12_17645 PF12728 Helix-turn-helix domain EP12_17650 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein EP12_17655 PF00512 His Kinase A (phospho-acceptor) domain EP12_17655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_17665 PF00072 Response regulator receiver domain EP12_17665 PF13487 HD domain EP12_17670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP12_17670 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_17675 PF01979 Amidohydrolase family EP12_17675 PF07676 WD40-like Beta Propeller Repeat EP12_17690 PF00005 ABC transporter EP12_17690 PF00664 ABC transporter transmembrane region EP12_17690 PF03412 Peptidase C39 family EP12_17710 PF00004 ATPase family associated with various cellular activities (AAA) EP12_17710 PF07724 AAA domain (Cdc48 subfamily) EP12_17710 PF10431 C-terminal, D2-small domain, of ClpB protein EP12_17715 PF00227 Proteasome subunit EP12_17720 PF05036 Sporulation related domain EP12_17725 PF00270 DEAD/DEAH box helicase EP12_17725 PF00271 Helicase conserved C-terminal domain EP12_17730 PF01197 Ribosomal protein L31 EP12_17740 PF00390 Malic enzyme, N-terminal domain EP12_17740 PF03949 Malic enzyme, NAD binding domain EP12_17745 PF01340 Met Apo-repressor, MetJ EP12_17750 PF02219 Methylenetetrahydrofolate reductase EP12_17755 PF03631 EP12_17755 EP12_17760 PF11172 EP12_17760 EP12_17770 PF00561 alpha/beta hydrolase fold EP12_17775 PF02580 D-Tyr-tRNA(Tyr) deacylase EP12_17780 PF00583 Acetyltransferase (GNAT) family EP12_17780 PF09500 Putative thioesterase (yiiD_Cterm) EP12_17785 PF00140 Sigma-70 factor, region 1 EP12_17785 PF04542 Sigma-70 region 2 EP12_17785 PF04545 Sigma-70, region 4 EP12_17805 PF00005 ABC transporter EP12_17810 PF00448 SRP54-type protein, GTPase domain EP12_17810 PF02881 SRP54-type protein, helical bundle domain EP12_17820 PF04222 Protein of unknown function (DUF416) EP12_17825 PF01914 EP12_17825 EP12_17835 PF00883 Cytosol aminopeptidase family, catalytic domain EP12_17835 PF12404 EP12_17835 EP12_17840 PF03749 Sugar fermentation stimulation protein EP12_17845 PF01258 Prokaryotic dksA/traR C4-type zinc finger EP12_17855 PF01743 Poly A polymerase head domain EP12_17855 PF12626 Polymerase A arginine-rich C-terminus EP12_17855 PF12627 Probable RNA and SrmB- binding site of polymerase A EP12_17860 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EP12_17865 PF02548 Ketopantoate hydroxymethyltransferase EP12_17870 PF02569 Pantoate-beta-alanine ligase EP12_17875 PF00282 Pyridoxal-dependent decarboxylase conserved domain EP12_17880 PF02390 Putative methyltransferase EP12_17890 PF00005 ABC transporter EP12_17900 PF00072 Response regulator receiver domain EP12_17900 PF00486 Transcriptional regulatory protein, C terminal EP12_17905 PF00512 His Kinase A (phospho-acceptor) domain EP12_17905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_17910 PF00593 TonB dependent receptor EP12_17910 PF07715 TonB-dependent Receptor Plug Domain EP12_17915 PF13640 2OG-Fe(II) oxygenase superfamily EP12_17930 PF00571 CBS domain EP12_17930 PF01595 EP12_17930 EP12_17935 PF03773 EP12_17935 EP12_17940 PF02554 EP12_17940 EP12_17940 PF13722 EP12_17940 EP12_17950 PF07859 alpha/beta hydrolase fold EP12_17955 PF00009 Elongation factor Tu GTP binding domain EP12_17955 PF03143 Elongation factor Tu C-terminal domain EP12_17955 PF03144 Elongation factor Tu domain 2 EP12_17985 PF00177 Ribosomal protein S7p/S5e EP12_17990 PF00164 Ribosomal protein S12/S23 EP12_18000 PF00562 RNA polymerase Rpb2, domain 6 EP12_18000 PF04560 RNA polymerase Rpb2, domain 7 EP12_18000 PF04561 RNA polymerase Rpb2, domain 2 EP12_18000 PF04563 RNA polymerase beta subunit EP12_18000 PF04565 RNA polymerase Rpb2, domain 3 EP12_18000 PF10385 RNA polymerase beta subunit external 1 domain EP12_18010 PF00466 Ribosomal protein L10 EP12_18020 PF00298 Ribosomal protein L11, RNA binding domain EP12_18020 PF03946 Ribosomal protein L11, N-terminal domain EP12_18035 PF00467 KOW motif EP12_18035 PF02357 Transcription termination factor nusG EP12_18040 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EP12_18060 PF00080 Copper/zinc superoxide dismutase (SODC) EP12_18065 PF03737 Demethylmenaquinone methyltransferase EP12_18075 PF10000 ACT domain EP12_18075 PF13840 ACT domain EP12_18085 PF01979 Amidohydrolase family EP12_18090 PF03831 PhnA protein EP12_18095 PF08212 Lipocalin-like domain EP12_18100 PF00248 Aldo/keto reductase family EP12_18110 PF07690 Major Facilitator Superfamily EP12_18120 PF01227 GTP cyclohydrolase I EP12_18130 PF04371 Porphyromonas-type peptidyl-arginine deiminase EP12_18135 PF00795 Carbon-nitrogen hydrolase EP12_18145 PF00990 GGDEF domain EP12_18150 PF00089 Trypsin EP12_18155 PF06719 EP12_18155 EP12_18155 PF12833 Helix-turn-helix domain EP12_18180 PF14534 Domain of unknown function (DUF4440) EP12_18195 PF00144 Beta-lactamase EP12_18210 PF00270 DEAD/DEAH box helicase EP12_18210 PF00271 Helicase conserved C-terminal domain EP12_18210 PF08494 EP12_18210 EP12_18220 PF01068 ATP dependent DNA ligase domain EP12_18220 PF04675 DNA ligase N terminus EP12_18220 PF04679 ATP dependent DNA ligase C terminal region EP12_18225 PF00294 pfkB family carbohydrate kinase EP12_18235 PF00326 Prolyl oligopeptidase family EP12_18240 PF00043 Glutathione S-transferase, C-terminal domain EP12_18240 PF02798 Glutathione S-transferase, N-terminal domain EP12_18245 PF00043 Glutathione S-transferase, C-terminal domain EP12_18245 PF13417 Glutathione S-transferase, N-terminal domain EP12_18250 PF08241 Methyltransferase domain EP12_18260 PF00171 Aldehyde dehydrogenase family EP12_18270 PF13430 EP12_18270 EP12_18275 PF00762 Ferrochelatase EP12_18290 PF01145 SPFH domain / Band 7 family EP12_18290 PF12221 EP12_18290 EP12_18295 PF01926 50S ribosome-binding GTPase EP12_18295 PF13167 EP12_18295 EP12_18295 PF16360 EP12_18295 EP12_18300 PF17209 EP12_18300 EP12_18305 PF01715 IPP transferase EP12_18320 PF02367 Uncharacterised P-loop hydrolase UPF0079 EP12_18330 PF08331 EP12_18330 EP12_18330 PF13484 EP12_18330 EP12_18355 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ EP12_18360 PF01475 Ferric uptake regulator family EP12_18365 PF13690 Chemotaxis phosphatase CheX EP12_18370 PF01894 Uncharacterised protein family UPF0047 EP12_18375 PF00691 OmpA family EP12_18375 PF02412 Thrombospondin type 3 repeat EP12_18400 PF04542 Sigma-70 region 2 EP12_18400 PF08281 Sigma-70, region 4 EP12_18410 PF01281 Ribosomal protein L9, N-terminal domain EP12_18410 PF03948 Ribosomal protein L9, C-terminal domain EP12_18415 PF01084 Ribosomal protein S18 EP12_18420 PF01250 Ribosomal protein S6 EP12_18425 PF00512 His Kinase A (phospho-acceptor) domain EP12_18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_18430 PF07130 YebG protein EP12_18450 PF00356 Bacterial regulatory proteins, lacI family EP12_18450 PF13377 Periplasmic binding protein-like domain EP12_18460 PF00232 Glycosyl hydrolase family 1 EP12_18470 PF00722 Glycosyl hydrolases family 16 EP12_18480 PF00376 MerR family regulatory protein EP12_18480 PF09278 MerR, DNA binding EP12_18495 PF10615 Protein of unknown function (DUF2470) EP12_18495 PF13883 Pyridoxamine 5'-phosphate oxidase EP12_18500 PF00005 ABC transporter EP12_18520 PF00593 TonB dependent receptor EP12_18520 PF07715 TonB-dependent Receptor Plug Domain EP12_18540 PF00990 GGDEF domain EP12_18555 PF08173 EP12_18555 EP12_18560 PF02322 EP12_18560 EP12_18565 PF01654 EP12_18565 EP12_18575 PF00593 TonB dependent receptor EP12_18575 PF07715 TonB-dependent Receptor Plug Domain EP12_18590 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EP12_18600 PF10986 EP12_18600 EP12_18615 PF11736 Protein of unknown function (DUF3299) EP12_18620 PF00005 ABC transporter EP12_18630 PF11127 Protein of unknown function (DUF2892) EP12_18640 PF17131 EP12_18640 EP12_18645 PF03176 MMPL family EP12_18655 PF02517 CAAX protease self-immunity EP12_18665 PF04954 Siderophore-interacting protein EP12_18665 PF08021 Siderophore-interacting FAD-binding domain EP12_18670 PF05532 CsbD-like EP12_18675 PF00196 Bacterial regulatory proteins, luxR family EP12_18685 PF00593 TonB dependent receptor EP12_18685 PF07715 TonB-dependent Receptor Plug Domain EP12_18690 PF13374 Tetratricopeptide repeat EP12_18690 PF13469 Sulfotransferase family EP12_18695 PF13469 Sulfotransferase family EP12_18710 PF07670 Nucleoside recognition EP12_18740 PF00155 Aminotransferase class I and II EP12_18750 PF01546 Peptidase family M20/M25/M40 EP12_18750 PF07687 Peptidase dimerisation domain EP12_18755 PF02274 Amidinotransferase EP12_18760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_18760 PF03466 LysR substrate binding domain EP12_18765 PF03466 LysR substrate binding domain EP12_18780 PF04542 Sigma-70 region 2 EP12_18780 PF08281 Sigma-70, region 4 EP12_18805 PF00472 RF-1 domain EP12_18810 PF00561 alpha/beta hydrolase fold EP12_18820 PF00571 CBS domain EP12_18835 PF00593 TonB dependent receptor EP12_18835 PF07715 TonB-dependent Receptor Plug Domain EP12_18845 PF01048 Phosphorylase superfamily EP12_18860 PF00107 Zinc-binding dehydrogenase EP12_18860 PF16884 EP12_18860 EP12_18865 PF00990 GGDEF domain EP12_18895 PF01063 Aminotransferase class IV EP12_18905 PF00474 Sodium:solute symporter family EP12_18915 PF01925 EP12_18915 EP12_18925 PF00248 Aldo/keto reductase family EP12_18930 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EP12_18935 PF03601 EP12_18935 EP12_18950 PF07080 Protein of unknown function (DUF1348) EP12_18970 PF00455 EP12_18970 EP12_18970 PF08220 DeoR-like helix-turn-helix domain EP12_18975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EP12_18975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EP12_18985 PF00990 GGDEF domain EP12_18985 PF02743 Cache domain EP12_18995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EP12_19000 PF02805 Metal binding domain of Ada EP12_19000 PF06029 AlkA N-terminal domain EP12_19000 PF12833 Helix-turn-helix domain EP12_19025 PF12769 Domain of unknown function (DUF3814) EP12_19030 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EP12_19030 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EP12_19065 PF13616 PPIC-type PPIASE domain EP12_19080 PF03626 EP12_19080 EP12_19090 PF00115 Cytochrome C and Quinol oxidase polypeptide I EP12_19105 PF00355 Rieske [2Fe-2S] domain EP12_19105 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EP12_19110 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_19115 PF12833 Helix-turn-helix domain EP12_19145 PF00857 Isochorismatase family EP12_19150 PF00296 Luciferase-like monooxygenase EP12_19165 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EP12_19170 PF03358 NADPH-dependent FMN reductase EP12_19175 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EP12_19195 PF04186 EP12_19195 EP12_19200 PF03091 CutA1 divalent ion tolerance protein EP12_19215 PF00364 Biotin-requiring enzyme EP12_19220 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain EP12_19220 PF02785 Biotin carboxylase C-terminal domain EP12_19220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EP12_19235 PF10985 EP12_19235 EP12_19240 PF00929 Exonuclease EP12_19240 PF08774 VRR-NUC domain EP12_19250 PF01613 Flavin reductase like domain EP12_19255 PF01355 High potential iron-sulfur protein EP12_19260 PF01425 Amidase EP12_19285 PF01808 AICARFT/IMPCHase bienzyme EP12_19285 PF02142 MGS-like domain EP12_19295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EP12_19295 PF02843 Phosphoribosylglycinamide synthetase, C domain EP12_19295 PF02844 Phosphoribosylglycinamide synthetase, N domain EP12_19300 PF06452 Domain of unknown function (DUF1083) EP12_19320 PF11017 EP12_19320 EP12_19325 PF00072 Response regulator receiver domain EP12_19325 PF00486 Transcriptional regulatory protein, C terminal EP12_19345 PF01430 Hsp33 protein EP12_19350 PF01479 S4 domain EP12_19375 PF07963 Prokaryotic N-terminal methylation motif EP12_19375 PF08334 Type II secretion system (T2SS), protein G EP12_19380 PF07963 Prokaryotic N-terminal methylation motif EP12_19390 PF07963 Prokaryotic N-terminal methylation motif EP12_19390 PF11612 Type II secretion system (T2SS), protein J EP12_19405 PF04612 Type II secretion system (T2SS), protein M EP12_19420 PF00171 Aldehyde dehydrogenase family EP12_19425 PF01931 Protein of unknown function DUF84 EP12_19430 PF13419 Haloacid dehalogenase-like hydrolase EP12_19455 PF04349 Periplasmic glucan biosynthesis protein, MdoG EP12_19465 PF06794 Uncharacterised protein family (UPF0270) EP12_19475 PF09523 EP12_19475 EP12_19485 PF09526 EP12_19485 EP12_19490 PF05359 EP12_19490 EP12_19495 PF04102 SlyX EP12_19505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_19505 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EP12_19515 PF01272 Transcription elongation factor, GreA/GreB, C-term EP12_19515 PF03449 Transcription elongation factor, N-terminal EP12_19525 PF12118 EP12_19525 EP12_19550 PF01106 NifU-like domain EP12_19550 PF01521 Iron-sulphur cluster biosynthesis EP12_19560 PF01177 Asp/Glu/Hydantoin racemase EP12_19565 PF13649 Methyltransferase domain EP12_19575 PF06445 GyrI-like small molecule binding domain EP12_19580 PF01554 MatE EP12_19590 PF00583 Acetyltransferase (GNAT) family EP12_19595 PF02630 SCO1/SenC EP12_19600 PF01040 UbiA prenyltransferase family EP12_19615 PF02104 EP12_19615 EP12_19620 PF11137 EP12_19620 EP12_19630 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EP12_19645 PF00717 Peptidase S24-like EP12_19645 PF01726 LexA DNA binding domain EP12_19650 PF00593 TonB dependent receptor EP12_19650 PF07715 TonB-dependent Receptor Plug Domain EP12_19655 PF13508 Acetyltransferase (GNAT) domain EP12_19665 PF00291 Pyridoxal-phosphate dependent enzyme EP12_19665 PF00585 C-terminal regulatory domain of Threonine dehydratase EP12_19675 PF03458 EP12_19675 EP12_19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_19685 PF03466 LysR substrate binding domain EP12_19695 PF07690 Major Facilitator Superfamily EP12_19700 PF01103 Surface antigen EP12_19700 PF17243 EP12_19700 EP12_19725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP12_19725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EP12_19740 PF01433 Peptidase family M1 EP12_19770 PF06938 Protein of unknown function (DUF1285) EP12_19780 PF09335 EP12_19780 EP12_19795 PF06724 EP12_19795 EP12_19800 PF01206 Sulfurtransferase TusA EP12_19805 PF00156 Phosphoribosyl transferase domain EP12_19840 PF00589 Phage integrase family EP12_19845 PF04002 RadC-like JAB domain EP12_19855 PF05930 Prophage CP4-57 regulatory protein (AlpA) EP12_19890 PF13245 Part of AAA domain EP12_19890 PF13361 UvrD-like helicase C-terminal domain EP12_19895 PF01381 Helix-turn-helix EP12_19895 PF06114 Domain of unknown function (DUF955) EP12_19920 PF13560 Helix-turn-helix domain EP12_19925 PF13356 Domain of unknown function (DUF4102) EP12_19930 PF13560 Helix-turn-helix domain EP12_19945 PF00440 Bacterial regulatory proteins, tetR family EP12_19950 PF07690 Major Facilitator Superfamily EP12_19955 PF00144 Beta-lactamase EP12_19980 PF13347 MFS/sugar transport protein EP12_19985 PF00356 Bacterial regulatory proteins, lacI family EP12_19985 PF13377 Periplasmic binding protein-like domain EP12_19990 PF13474 SnoaL-like domain EP12_19995 PF00691 OmpA family EP12_19995 PF13488 EP12_19995 EP12_20000 PF01966 HD domain EP12_20000 PF11871 EP12_20000 EP12_20010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EP12_20015 PF03942 EP12_20015 EP12_20020 PF00043 Glutathione S-transferase, C-terminal domain EP12_20020 PF13417 Glutathione S-transferase, N-terminal domain EP12_20035 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EP12_20035 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EP12_20040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EP12_20040 PF02874 ATP synthase alpha/beta family, beta-barrel domain EP12_20045 PF00231 ATP synthase EP12_20050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EP12_20050 PF00306 ATP synthase alpha/beta chain, C terminal domain EP12_20050 PF02874 ATP synthase alpha/beta family, beta-barrel domain EP12_20055 PF00213 ATP synthase delta (OSCP) subunit EP12_20060 PF00430 ATP synthase B/B' CF(0) EP12_20065 PF00137 ATP synthase subunit C EP12_20070 PF00119 ATP synthase A chain EP12_20075 PF03899 EP12_20075 EP12_20080 PF02195 ParB-like nuclease domain EP12_20085 PF13614 AAA domain EP12_20090 PF02527 rRNA small subunit methyltransferase G EP12_20095 PF01134 Glucose inhibited division protein A EP12_20095 PF13932 GidA associated domain 3 EP12_20100 PF01695 IstB-like ATP binding protein EP12_20110 PF00258 Flavodoxin EP12_20115 PF01926 50S ribosome-binding GTPase EP12_20115 PF10396 GTP-binding protein TrmE N-terminus EP12_20115 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE EP12_20120 PF04461 Protein of unknown function (DUF520) EP12_20125 PF02096 60Kd inner membrane protein EP12_20125 PF14849 YidC periplasmic domain EP12_20130 PF00825 Ribonuclease P