locus-tag class description MASE_00005 PF11638 DnaA N-terminal domain MASE_00005 PF00308 Bacterial dnaA protein MASE_00005 PF08299 Bacterial dnaA protein helix-turn-helix MASE_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MASE_00010 PF02767 DNA polymerase III beta subunit, central domain MASE_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MASE_00015 PF02463 RecF/RecN/SMC N terminal domain MASE_00020 PF01751 Toprim domain MASE_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_00020 PF18053 DNA gyrase B subunit insert domain MASE_00020 PF00986 DNA gyrase B subunit, carboxyl terminus MASE_00020 PF00204 DNA gyrase B MASE_00040 PF02092 Glycyl-tRNA synthetase beta subunit MASE_00040 PF05746 DALR anticodon binding domain MASE_00045 PF02091 Glycyl-tRNA synthetase alpha subunit MASE_00050 PF03352 Methyladenine glycosylase MASE_00060 PF04220 Der GTPase activator (YihI) MASE_00070 PF00034 Cytochrome c MASE_00075 PF01926 50S ribosome-binding GTPase MASE_00080 PF01367 5'-3' exonuclease, C-terminal SAM fold MASE_00080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MASE_00080 PF00476 DNA polymerase family A MASE_00080 PF01612 3'-5' exonuclease MASE_00090 PF02386 Cation transport protein MASE_00095 PF02080 TrkA-C domain MASE_00095 PF02254 TrkA-N domain MASE_00100 PF01189 16S rRNA methyltransferase RsmB/F MASE_00100 PF01029 NusB family MASE_00105 PF00551 Formyl transferase MASE_00105 PF02911 Formyl transferase, C-terminal domain MASE_00110 PF01327 Polypeptide deformylase MASE_00120 PF17782 DprA winged helix domain MASE_00120 PF02481 DNA recombination-mediator protein A MASE_00125 PF04361 Protein of unknown function (DUF494) MASE_00135 PF01300 Telomere recombination MASE_00140 PF01218 Coproporphyrinogen III oxidase MASE_00145 PF03922 OmpW family MASE_00155 PF01488 Shikimate / quinate 5-dehydrogenase MASE_00155 PF08501 Shikimate dehydrogenase substrate binding domain MASE_00155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MASE_00160 PF00132 Bacterial transferase hexapeptide (six repeats) MASE_00185 PF07733 Bacterial DNA polymerase III alpha NTPase domain MASE_00185 PF01336 OB-fold nucleic acid binding domain MASE_00185 PF02811 PHP domain MASE_00185 PF14579 Helix-hairpin-helix motif MASE_00185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MASE_00215 PF02225 PA domain MASE_00215 PF04389 Peptidase family M28 MASE_00220 PF00440 Bacterial regulatory proteins, tetR family MASE_00225 PF04127 DNA / pantothenate metabolism flavoprotein MASE_00225 PF02441 Flavoprotein MASE_00230 PF04002 RadC-like JAB domain MASE_00250 PF06082 Exopolysaccharide biosynthesis protein YbjH MASE_00255 PF00830 Ribosomal L28 family MASE_00260 PF00471 Ribosomal protein L33 MASE_00270 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MASE_00270 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MASE_00270 PF06827 Zinc finger found in FPG and IleRS MASE_00275 PF01467 Cytidylyltransferase-like MASE_00295 PF03707 Bacterial signalling protein N terminal repeat MASE_00295 PF00990 Diguanylate cyclase, GGDEF domain MASE_00295 PF00563 EAL domain MASE_00300 PF00155 Aminotransferase class I and II MASE_00305 PF08240 Alcohol dehydrogenase GroES-like domain MASE_00305 PF00107 Zinc-binding dehydrogenase MASE_00310 PF00581 Rhodanese-like domain MASE_00315 PF01694 Rhomboid family MASE_00315 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MASE_00325 PF04345 Chorismate lyase MASE_00330 PF01040 UbiA prenyltransferase family MASE_00335 PF04380 Membrane fusogenic activity MASE_00340 PF13361 UvrD-like helicase C-terminal domain MASE_00340 PF00580 UvrD/REP helicase N-terminal domain MASE_00345 PF00563 EAL domain MASE_00345 PF00990 Diguanylate cyclase, GGDEF domain MASE_00345 PF03707 Bacterial signalling protein N terminal repeat MASE_00350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MASE_00360 PF02028 BCCT, betaine/carnitine/choline family transporter MASE_00400 PF07715 TonB-dependent Receptor Plug Domain MASE_00400 PF00593 TonB dependent receptor MASE_00415 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_00415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_00415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MASE_00420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_00420 PF03466 LysR substrate binding domain MASE_00425 PF00753 Metallo-beta-lactamase superfamily MASE_00430 PF04317 YcjX-like family, DUF463 MASE_00445 PF04055 Radical SAM superfamily MASE_00445 PF06968 Biotin and Thiamin Synthesis associated domain MASE_00450 PF05690 Thiazole biosynthesis protein ThiG MASE_00460 PF00899 ThiF family MASE_00465 PF02581 Thiamine monophosphate synthase MASE_00470 PF13667 ThiC-associated domain MASE_00470 PF01964 Radical SAM ThiC family MASE_00480 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MASE_00485 PF02602 Uroporphyrinogen-III synthase HemD MASE_00490 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MASE_00490 PF03900 Porphobilinogen deaminase, C-terminal domain MASE_00495 PF00072 Response regulator receiver domain MASE_00495 PF00990 Diguanylate cyclase, GGDEF domain MASE_00505 PF00625 Guanylate kinase MASE_00510 PF01192 RNA polymerase Rpb6 MASE_00515 PF02824 TGS domain MASE_00515 PF04607 Region found in RelA / SpoT proteins MASE_00515 PF13291 ACT domain MASE_00520 PF01042 Endoribonuclease L-PSP MASE_00525 PF00588 SpoU rRNA Methylase family MASE_00525 PF12105 SpoU, rRNA methylase, C-terminal MASE_00540 PF04445 Putative SAM-dependent methyltransferase MASE_00545 PF08534 Redoxin MASE_00560 PF00528 Binding-protein-dependent transport system inner membrane component MASE_00565 PF00005 ABC transporter MASE_00565 PF08402 TOBE domain MASE_00575 PF03922 OmpW family MASE_00590 PF00563 EAL domain MASE_00590 PF04940 Sensors of blue-light using FAD MASE_00595 PF00563 EAL domain MASE_00595 PF13426 PAS domain MASE_00595 PF00990 Diguanylate cyclase, GGDEF domain MASE_00600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_00600 PF03466 LysR substrate binding domain MASE_00605 PF01810 LysE type translocator MASE_00610 PF00893 Small Multidrug Resistance protein MASE_00625 PF00529 HlyD membrane-fusion protein of T1SS MASE_00625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MASE_00630 PF00873 AcrB/AcrD/AcrF family MASE_00640 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain MASE_00640 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain MASE_00645 PF00850 Histone deacetylase domain MASE_00650 PF00462 Glutaredoxin MASE_00660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_00660 PF12729 Four helix bundle sensory module for signal transduction MASE_00660 PF00672 HAMP domain MASE_00670 PF11737 Protein of unknown function (DUF3300) MASE_00675 PF00925 GTP cyclohydrolase II MASE_00680 PF00563 EAL domain MASE_00680 PF00990 Diguanylate cyclase, GGDEF domain MASE_00680 PF08448 PAS fold MASE_00695 PF09382 RQC domain MASE_00695 PF00270 DEAD/DEAH box helicase MASE_00695 PF16124 RecQ zinc-binding MASE_00695 PF00570 HRDC domain MASE_00695 PF00271 Helicase conserved C-terminal domain MASE_00700 PF03061 Thioesterase superfamily MASE_00705 PF01769 Divalent cation transporter MASE_00705 PF03448 MgtE intracellular N domain MASE_00705 PF00571 CBS domain MASE_00710 PF00892 EamA-like transporter family MASE_00725 PF00580 UvrD/REP helicase N-terminal domain MASE_00725 PF13361 UvrD-like helicase C-terminal domain MASE_00730 PF06426 Serine acetyltransferase, N-terminal MASE_00730 PF00132 Bacterial transferase hexapeptide (six repeats) MASE_00735 PF08448 PAS fold MASE_00735 PF00990 Diguanylate cyclase, GGDEF domain MASE_00740 PF13419 Haloacid dehalogenase-like hydrolase MASE_00755 PF01678 Diaminopimelate epimerase MASE_00760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MASE_00760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MASE_00775 PF01569 PAP2 superfamily MASE_00780 PF03737 Aldolase/RraA MASE_00795 PF02441 Flavoprotein MASE_00800 PF08245 Mur ligase middle domain MASE_00800 PF02875 Mur ligase family, glutamate ligase domain MASE_00800 PF01225 Mur ligase family, catalytic domain MASE_00805 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MASE_00810 PF00719 Inorganic pyrophosphatase MASE_00855 PF17760 UvrA interaction domain MASE_00855 PF17755 UvrA DNA-binding domain MASE_00855 PF00005 ABC transporter MASE_00860 PF07690 Major Facilitator Superfamily MASE_00865 PF13419 Haloacid dehalogenase-like hydrolase MASE_00885 PF00356 Bacterial regulatory proteins, lacI family MASE_00890 PF01263 Aldose 1-epimerase MASE_00895 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MASE_00895 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MASE_00900 PF08544 GHMP kinases C terminal MASE_00900 PF10509 Galactokinase galactose-binding signature MASE_00900 PF00288 GHMP kinases N terminal domain MASE_00905 PF00474 Sodium:solute symporter family MASE_00910 PF00436 Single-strand binding protein family MASE_00925 PF16874 Glycosyl hydrolase family 36 C-terminal domain MASE_00925 PF16875 Glycosyl hydrolase family 36 N-terminal domain MASE_00930 PF00474 Sodium:solute symporter family MASE_00940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MASE_00940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MASE_00945 PF00455 DeoR C terminal sensor domain MASE_00945 PF08220 DeoR-like helix-turn-helix domain MASE_00950 PF01266 FAD dependent oxidoreductase MASE_00950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MASE_00985 PF00263 Bacterial type II and III secretion system protein MASE_00985 PF03958 Bacterial type II/III secretion system short domain MASE_00990 PF13401 AAA domain MASE_00990 PF01471 Putative peptidoglycan binding domain MASE_01000 PF00437 Type II/IV secretion system protein MASE_01005 PF00482 Type II secretion system (T2SS), protein F MASE_01015 PF07963 Prokaryotic N-terminal methylation motif MASE_01015 PF00114 Pilin (bacterial filament) MASE_01020 PF00114 Pilin (bacterial filament) MASE_01020 PF07963 Prokaryotic N-terminal methylation motif MASE_01055 PF04085 rod shape-determining protein MreC MASE_01060 PF04093 rod shape-determining protein MreD MASE_01065 PF02545 Maf-like protein MASE_01070 PF10150 Ribonuclease E/G family MASE_01070 PF00575 S1 RNA binding domain MASE_01080 PF00795 Carbon-nitrogen hydrolase MASE_01085 PF01523 Putative modulator of DNA gyrase MASE_01095 PF04751 Protein of unknown function (DUF615) MASE_01100 PF01523 Putative modulator of DNA gyrase MASE_01110 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MASE_01110 PF02837 Glycosyl hydrolases family 2, sugar binding domain MASE_01110 PF00703 Glycosyl hydrolases family 2 MASE_01110 PF16353 Domain of unknown function(DUF4981) MASE_01110 PF02929 Beta galactosidase small chain MASE_01115 PF00072 Response regulator receiver domain MASE_01115 PF00486 Transcriptional regulatory protein, C terminal MASE_01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_01120 PF00512 His Kinase A (phospho-acceptor) domain MASE_01120 PF00497 Bacterial extracellular solute-binding proteins, family 3 MASE_01125 PF00534 Glycosyl transferases group 1 MASE_01125 PF08323 Starch synthase catalytic domain MASE_01130 PF08468 Methyltransferase small domain N-terminal MASE_01130 PF05175 Methyltransferase small domain MASE_01135 PF02390 Putative methyltransferase MASE_01145 PF14815 NUDIX domain MASE_01145 PF00633 Helix-hairpin-helix motif MASE_01145 PF00730 HhH-GPD superfamily base excision DNA repair protein MASE_01150 PF04362 Bacterial Fe(2+) trafficking MASE_01165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_01165 PF17200 Single Cache domain 2 MASE_01165 PF00672 HAMP domain MASE_01170 PF00072 Response regulator receiver domain MASE_01175 PF01584 CheW-like domain MASE_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_01175 PF09078 CheY binding MASE_01175 PF02895 Signal transducing histidine kinase, homodimeric domain MASE_01175 PF01627 Hpt domain MASE_01180 PF01584 CheW-like domain MASE_01185 PF13426 PAS domain MASE_01185 PF08447 PAS fold MASE_01185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_01190 PF01739 CheR methyltransferase, SAM binding domain MASE_01190 PF03705 CheR methyltransferase, all-alpha domain MASE_01195 PF03975 CheD chemotactic sensory transduction MASE_01200 PF01339 CheB methylesterase MASE_01200 PF00072 Response regulator receiver domain MASE_01205 PF00672 HAMP domain MASE_01205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_01205 PF17200 Single Cache domain 2 MASE_01210 PF00072 Response regulator receiver domain MASE_01215 PF01627 Hpt domain MASE_01215 PF02895 Signal transducing histidine kinase, homodimeric domain MASE_01215 PF09078 CheY binding MASE_01215 PF01584 CheW-like domain MASE_01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_01220 PF01584 CheW-like domain MASE_01225 PF08447 PAS fold MASE_01225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_01225 PF13426 PAS domain MASE_01230 PF13426 PAS domain MASE_01230 PF08447 PAS fold MASE_01230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_01235 PF03705 CheR methyltransferase, all-alpha domain MASE_01235 PF01739 CheR methyltransferase, SAM binding domain MASE_01240 PF03975 CheD chemotactic sensory transduction MASE_01245 PF01339 CheB methylesterase MASE_01245 PF00072 Response regulator receiver domain MASE_01255 PF13419 Haloacid dehalogenase-like hydrolase MASE_01265 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MASE_01265 PF00356 Bacterial regulatory proteins, lacI family MASE_01275 PF01204 Trehalase MASE_01290 PF13419 Haloacid dehalogenase-like hydrolase MASE_01320 PF00356 Bacterial regulatory proteins, lacI family MASE_01325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MASE_01325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MASE_01335 PF03825 Nucleoside H+ symporter MASE_01345 PF05199 GMC oxidoreductase MASE_01345 PF00732 GMC oxidoreductase MASE_01360 PF00465 Iron-containing alcohol dehydrogenase MASE_01365 PF01063 Amino-transferase class IV MASE_01370 PF00300 Histidine phosphatase superfamily (branch 1) MASE_01380 PF00330 Aconitase family (aconitate hydratase) MASE_01380 PF00694 Aconitase C-terminal domain MASE_01390 PF00437 Type II/IV secretion system protein MASE_01395 PF00338 Ribosomal protein S10p/S20e MASE_01400 PF00297 Ribosomal protein L3 MASE_01405 PF00573 Ribosomal protein L4/L1 family MASE_01410 PF00276 Ribosomal protein L23 MASE_01415 PF00181 Ribosomal Proteins L2, RNA binding domain MASE_01415 PF03947 Ribosomal Proteins L2, C-terminal domain MASE_01420 PF00203 Ribosomal protein S19 MASE_01425 PF00237 Ribosomal protein L22p/L17e MASE_01430 PF00189 Ribosomal protein S3, C-terminal domain MASE_01430 PF07650 KH domain MASE_01435 PF00252 Ribosomal protein L16p/L10e MASE_01440 PF00831 Ribosomal L29 protein MASE_01445 PF00366 Ribosomal protein S17 MASE_01455 PF00534 Glycosyl transferases group 1 MASE_01455 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MASE_01475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_01475 PF02743 Cache domain MASE_01475 PF00672 HAMP domain MASE_01480 PF01432 Peptidase family M3 MASE_01500 PF00551 Formyl transferase MASE_01500 PF01842 ACT domain MASE_01510 PF08482 ATP-dependent helicase C-terminal MASE_01510 PF04408 Helicase associated domain (HA2) MASE_01510 PF00271 Helicase conserved C-terminal domain MASE_01510 PF00270 DEAD/DEAH box helicase MASE_01520 PF13406 Transglycosylase SLT domain MASE_01525 PF00905 Penicillin binding protein transpeptidase domain MASE_01525 PF14814 Bifunctional transglycosylase second domain MASE_01525 PF00912 Transglycosylase MASE_01540 PF05661 Protein of unknown function (DUF808) MASE_01550 PF12833 Helix-turn-helix domain MASE_01550 PF02311 AraC-like ligand binding domain MASE_01560 PF00543 Nitrogen regulatory protein P-II MASE_01565 PF00909 Ammonium Transporter Family MASE_01575 PF04261 Dyp-type peroxidase family MASE_01580 PF00211 Adenylate and Guanylate cyclase catalytic domain MASE_01580 PF00672 HAMP domain MASE_01585 PF00202 Aminotransferase class-III MASE_01590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MASE_01590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MASE_01605 PF00873 AcrB/AcrD/AcrF family MASE_01615 PF00512 His Kinase A (phospho-acceptor) domain MASE_01615 PF01627 Hpt domain MASE_01615 PF00072 Response regulator receiver domain MASE_01615 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MASE_01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_01615 PF00672 HAMP domain MASE_01620 PF03989 DNA gyrase C-terminal domain, beta-propeller MASE_01620 PF00521 DNA gyrase/topoisomerase IV, subunit A MASE_01630 PF13188 PAS domain MASE_01630 PF00990 Diguanylate cyclase, GGDEF domain MASE_01630 PF00563 EAL domain MASE_01630 PF03707 Bacterial signalling protein N terminal repeat MASE_01640 PF00171 Aldehyde dehydrogenase family MASE_01645 PF04958 Arginine N-succinyltransferase beta subunit MASE_01650 PF00202 Aminotransferase class-III MASE_01660 PF00117 Glutamine amidotransferase class-I MASE_01665 PF00579 tRNA synthetases class I (W and Y) MASE_01670 PF00834 Ribulose-phosphate 3 epimerase family MASE_01690 PF02086 D12 class N6 adenine-specific DNA methyltransferase MASE_01700 PF01761 3-dehydroquinate synthase MASE_01705 PF01202 Shikimate kinase MASE_01710 PF07660 Secretin and TonB N terminus short domain MASE_01710 PF11741 AMIN domain MASE_01710 PF03958 Bacterial type II/III secretion system short domain MASE_01710 PF00263 Bacterial type II and III secretion system protein MASE_01735 PF17092 Penicillin-binding protein OB-like domain MASE_01735 PF00905 Penicillin binding protein transpeptidase domain MASE_01735 PF00912 Transglycosylase MASE_01740 PF03949 Malic enzyme, NAD binding domain MASE_01740 PF00390 Malic enzyme, N-terminal domain MASE_01750 PF02798 Glutathione S-transferase, N-terminal domain MASE_01760 PF00199 Catalase MASE_01760 PF06628 Catalase-related immune-responsive MASE_01785 PF00990 Diguanylate cyclase, GGDEF domain MASE_01785 PF03707 Bacterial signalling protein N terminal repeat MASE_01785 PF00563 EAL domain MASE_01800 PF00206 Lyase MASE_01800 PF14698 Argininosuccinate lyase C-terminal MASE_01805 PF00764 Arginosuccinate synthase MASE_01810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MASE_01810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MASE_01815 PF00696 Amino acid kinase family MASE_01820 PF02774 Semialdehyde dehydrogenase, dimerisation domain MASE_01820 PF01118 Semialdehyde dehydrogenase, NAD binding domain MASE_01825 PF02142 MGS-like domain MASE_01835 PF02107 Flagellar L-ring protein MASE_01850 PF00486 Transcriptional regulatory protein, C terminal MASE_01850 PF00072 Response regulator receiver domain MASE_01855 PF00672 HAMP domain MASE_01855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_01855 PF16527 Two-component sensor protein CpxA, periplasmic domain MASE_01855 PF00512 His Kinase A (phospho-acceptor) domain MASE_01860 PF12146 Serine aminopeptidase, S33 MASE_01865 PF00588 SpoU rRNA Methylase family MASE_01870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MASE_01875 PF12704 MacB-like periplasmic core domain MASE_01875 PF00005 ABC transporter MASE_01875 PF02687 FtsX-like permease family MASE_01880 PF02321 Outer membrane efflux protein MASE_01890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MASE_01890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MASE_01895 PF02556 Preprotein translocase subunit SecB MASE_01900 PF00462 Glutaredoxin MASE_01905 PF00581 Rhodanese-like domain MASE_01910 PF01551 Peptidase family M23 MASE_01915 PF04748 Divergent polysaccharide deacetylase MASE_01925 PF03009 Glycerophosphoryl diester phosphodiesterase family MASE_01935 PF02666 Phosphatidylserine decarboxylase MASE_01940 PF03193 RsgA GTPase MASE_01945 PF00929 Exonuclease MASE_01960 PF07715 TonB-dependent Receptor Plug Domain MASE_01960 PF00593 TonB dependent receptor MASE_01975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MASE_01975 PF00205 Thiamine pyrophosphate enzyme, central domain MASE_01975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MASE_01980 PF10369 Small subunit of acetolactate synthase MASE_01990 PF02416 mttA/Hcf106 family MASE_01995 PF02416 mttA/Hcf106 family MASE_02000 PF00902 Sec-independent protein translocase protein (TatC) MASE_02010 PF01026 TatD related DNase MASE_02015 PF00990 Diguanylate cyclase, GGDEF domain MASE_02015 PF00563 EAL domain MASE_02015 PF01590 GAF domain MASE_02015 PF00360 Phytochrome region MASE_02020 PF00490 Delta-aminolevulinic acid dehydratase MASE_02025 PF02541 Ppx/GppA phosphatase family MASE_02040 PF00085 Thioredoxin MASE_02045 PF07497 Rho termination factor, RNA-binding domain MASE_02045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MASE_02045 PF07498 Rho termination factor, N-terminal domain MASE_02055 PF09308 LuxQ, periplasmic MASE_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_02055 PF00072 Response regulator receiver domain MASE_02055 PF00512 His Kinase A (phospho-acceptor) domain MASE_02060 PF06965 Na+/H+ antiporter 1 MASE_02065 PF00731 AIR carboxylase MASE_02070 PF02222 ATP-grasp domain MASE_02070 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MASE_02080 PF00210 Ferritin-like domain MASE_02085 PF07995 Glucose / Sorbosone dehydrogenase MASE_02090 PF00326 Prolyl oligopeptidase family MASE_02090 PF07676 WD40-like Beta Propeller Repeat MASE_02100 PF00085 Thioredoxin MASE_02115 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MASE_02120 PF00709 Adenylosuccinate synthetase MASE_02125 PF00171 Aldehyde dehydrogenase family MASE_02150 PF03553 Na+/H+ antiporter family MASE_02155 PF00933 Glycosyl hydrolase family 3 N terminal domain MASE_02165 PF07075 Protein of unknown function (DUF1343) MASE_02170 PF01380 SIS domain MASE_02175 PF01168 Alanine racemase, N-terminal domain MASE_02175 PF00842 Alanine racemase, C-terminal domain MASE_02190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MASE_02225 PF00464 Serine hydroxymethyltransferase MASE_02230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_02230 PF03466 LysR substrate binding domain MASE_02235 PF03831 PhnA domain MASE_02235 PF08274 PhnA Zinc-Ribbon MASE_02240 PF00583 Acetyltransferase (GNAT) family MASE_02250 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MASE_02310 PF00108 Thiolase, N-terminal domain MASE_02310 PF02803 Thiolase, C-terminal domain MASE_02315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MASE_02315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MASE_02315 PF00378 Enoyl-CoA hydratase/isomerase MASE_02320 PF01464 Transglycosylase SLT domain MASE_02320 PF01551 Peptidase family M23 MASE_02320 PF10145 Phage-related minor tail protein MASE_02325 PF00557 Metallopeptidase family M24 MASE_02335 PF00348 Polyprenyl synthetase MASE_02340 PF00829 Ribosomal prokaryotic L21 protein MASE_02345 PF01016 Ribosomal L27 protein MASE_02350 PF01926 50S ribosome-binding GTPase MASE_02350 PF01018 GTP1/OBG MASE_02360 PF09055 Nickel-containing superoxide dismutase MASE_02375 PF00186 Dihydrofolate reductase MASE_02380 PF00140 Sigma-70 factor, region 1.2 MASE_02380 PF04542 Sigma-70 region 2 MASE_02380 PF04539 Sigma-70 region 3 MASE_02380 PF04545 Sigma-70, region 4 MASE_02385 PF01476 LysM domain MASE_02385 PF01551 Peptidase family M23 MASE_02390 PF09335 SNARE associated Golgi protein MASE_02400 PF01142 tRNA pseudouridine synthase D (TruD) MASE_02405 PF02542 YgbB family MASE_02410 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MASE_02415 PF04977 Septum formation initiator MASE_02425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_02425 PF17200 Single Cache domain 2 MASE_02425 PF00672 HAMP domain MASE_02430 PF01037 Lrp/AsnC ligand binding domain MASE_02430 PF13404 AsnC-type helix-turn-helix domain MASE_02435 PF00107 Zinc-binding dehydrogenase MASE_02435 PF08240 Alcohol dehydrogenase GroES-like domain MASE_02445 PF00171 Aldehyde dehydrogenase family MASE_02445 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MASE_02445 PF01619 Proline dehydrogenase MASE_02445 PF14850 DNA-binding domain of Proline dehydrogenase MASE_02450 PF02321 Outer membrane efflux protein MASE_02470 PF00486 Transcriptional regulatory protein, C terminal MASE_02470 PF00072 Response regulator receiver domain MASE_02475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_02475 PF00512 His Kinase A (phospho-acceptor) domain MASE_02475 PF18719 ArlS sensor domain MASE_02495 PF02976 DNA mismatch repair enzyme MutH MASE_02500 PF00293 NUDIX domain MASE_02505 PF05524 PEP-utilising enzyme, N-terminal MASE_02505 PF00391 PEP-utilising enzyme, mobile domain MASE_02505 PF01590 GAF domain MASE_02505 PF02896 PEP-utilising enzyme, TIM barrel domain MASE_02510 PF01925 Sulfite exporter TauE/SafE MASE_02515 PF01790 Prolipoprotein diacylglyceryl transferase MASE_02520 PF00303 Thymidylate synthase MASE_02525 PF00072 Response regulator receiver domain MASE_02530 PF05230 MASE2 domain MASE_02530 PF00990 Diguanylate cyclase, GGDEF domain MASE_02535 PF00072 Response regulator receiver domain MASE_02535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MASE_02535 PF00672 HAMP domain MASE_02535 PF01627 Hpt domain MASE_02535 PF00512 His Kinase A (phospho-acceptor) domain MASE_02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_02540 PF07690 Major Facilitator Superfamily MASE_02555 PF00849 RNA pseudouridylate synthase MASE_02560 PF00271 Helicase conserved C-terminal domain MASE_02560 PF12137 RNA polymerase recycling family C-terminal MASE_02560 PF00176 SNF2 family N-terminal domain MASE_02560 PF18337 RapA N-terminal Tudor like domain MASE_02560 PF18339 RapA N-terminal Tudor like domain 1 MASE_02575 PF02562 PhoH-like protein MASE_02575 PF13638 PIN domain MASE_02580 PF00392 Bacterial regulatory proteins, gntR family MASE_02580 PF00155 Aminotransferase class I and II MASE_02585 PF12801 4Fe-4S binding domain MASE_02585 PF13746 4Fe-4S dicluster domain MASE_02585 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MASE_02605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MASE_02605 PF10414 Sirohaem synthase dimerisation region MASE_02610 PF00270 DEAD/DEAH box helicase MASE_02610 PF00271 Helicase conserved C-terminal domain MASE_02610 PF03880 DbpA RNA binding domain MASE_02630 PF02321 Outer membrane efflux protein MASE_02635 PF00293 NUDIX domain MASE_02645 PF00149 Calcineurin-like phosphoesterase MASE_02650 PF05728 Uncharacterised protein family (UPF0227) MASE_02655 PF00204 DNA gyrase B MASE_02655 PF00986 DNA gyrase B subunit, carboxyl terminus MASE_02655 PF01751 Toprim domain MASE_02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_02665 PF13419 Haloacid dehalogenase-like hydrolase MASE_02685 PF04055 Radical SAM superfamily MASE_02695 PF00152 tRNA synthetases class II (D, K and N) MASE_02700 PF00593 TonB dependent receptor MASE_02700 PF07715 TonB-dependent Receptor Plug Domain MASE_02715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MASE_02720 PF05175 Methyltransferase small domain MASE_02735 PF01722 BolA-like protein MASE_02740 PF01569 PAP2 superfamily MASE_02760 PF08376 Nitrate and nitrite sensing MASE_02760 PF03861 ANTAR domain MASE_02770 PF00916 Sulfate permease family MASE_02770 PF01740 STAS domain MASE_02780 PF04324 BFD-like [2Fe-2S] binding domain MASE_02780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MASE_02780 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_02780 PF18267 Rubredoxin NAD+ reductase C-terminal domain MASE_02780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MASE_02785 PF13806 Rieske-like [2Fe-2S] domain MASE_02790 PF01568 Molydopterin dinucleotide binding domain MASE_02790 PF00384 Molybdopterin oxidoreductase MASE_02790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MASE_02790 PF04324 BFD-like [2Fe-2S] binding domain MASE_02795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MASE_02795 PF14824 Sirohaem biosynthesis protein central MASE_02795 PF10414 Sirohaem synthase dimerisation region MASE_02800 PF00591 Glycosyl transferase family, a/b domain MASE_02800 PF02885 Glycosyl transferase family, helical bundle domain MASE_02805 PF02872 5'-nucleotidase, C-terminal domain MASE_02805 PF00149 Calcineurin-like phosphoesterase MASE_02810 PF00360 Phytochrome region MASE_02810 PF00563 EAL domain MASE_02810 PF00990 Diguanylate cyclase, GGDEF domain MASE_02810 PF01590 GAF domain MASE_02815 PF08447 PAS fold MASE_02815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_02815 PF13426 PAS domain MASE_02820 PF00005 ABC transporter MASE_02825 PF00528 Binding-protein-dependent transport system inner membrane component MASE_02830 PF00005 ABC transporter MASE_02845 PF01323 DSBA-like thioredoxin domain MASE_02850 PF07715 TonB-dependent Receptor Plug Domain MASE_02850 PF00593 TonB dependent receptor MASE_02865 PF12801 4Fe-4S binding domain MASE_02865 PF13746 4Fe-4S dicluster domain MASE_02865 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MASE_02880 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_02880 PF12806 Acetyl-CoA dehydrogenase C-terminal like MASE_02880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_02880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MASE_02900 PF13378 Enolase C-terminal domain-like MASE_02900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MASE_02905 PF00596 Class II Aldolase and Adducin N-terminal domain MASE_02915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MASE_02920 PF00873 AcrB/AcrD/AcrF family MASE_02935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_02935 PF00672 HAMP domain MASE_02935 PF02743 Cache domain MASE_02940 PF00140 Sigma-70 factor, region 1.2 MASE_02940 PF03979 Sigma-70 factor, region 1.1 MASE_02940 PF04546 Sigma-70, non-essential region MASE_02940 PF04539 Sigma-70 region 3 MASE_02940 PF04542 Sigma-70 region 2 MASE_02940 PF04545 Sigma-70, region 4 MASE_02945 PF01807 CHC2 zinc finger MASE_02945 PF08275 DNA primase catalytic core, N-terminal domain MASE_02945 PF08278 DNA primase DnaG DnaB-binding MASE_02945 PF10410 DnaB-helicase binding domain of primase MASE_02955 PF01165 Ribosomal protein S21 MASE_02960 PF00814 Glycoprotease family MASE_02970 PF02660 Glycerol-3-phosphate acyltransferase MASE_02975 PF02152 Dihydroneopterin aldolase MASE_02985 PF02673 Bacitracin resistance protein BacA MASE_02990 PF01230 HIT domain MASE_03005 PF03594 Benzoate membrane transport protein MASE_03010 PF07883 Cupin domain MASE_03010 PF01381 Helix-turn-helix MASE_03015 PF04381 Putative exonuclease, RdgC MASE_03020 PF00497 Bacterial extracellular solute-binding proteins, family 3 MASE_03020 PF00512 His Kinase A (phospho-acceptor) domain MASE_03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_03025 PF00486 Transcriptional regulatory protein, C terminal MASE_03025 PF00072 Response regulator receiver domain MASE_03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_03030 PF00512 His Kinase A (phospho-acceptor) domain MASE_03030 PF11808 Phosphate regulon sensor protein PhoR MASE_03030 PF00989 PAS fold MASE_03035 PF12849 PBP superfamily domain MASE_03060 PF01618 MotA/TolQ/ExbB proton channel family MASE_03065 PF01618 MotA/TolQ/ExbB proton channel family MASE_03070 PF02472 Biopolymer transport protein ExbD/TolR MASE_03075 PF03544 Gram-negative bacterial TonB protein C-terminal MASE_03085 PF00072 Response regulator receiver domain MASE_03100 PF13193 AMP-binding enzyme C-terminal domain MASE_03100 PF00501 AMP-binding enzyme MASE_03110 PF07995 Glucose / Sorbosone dehydrogenase MASE_03115 PF00330 Aconitase family (aconitate hydratase) MASE_03115 PF06434 Aconitate hydratase 2 N-terminus MASE_03115 PF11791 Aconitate B N-terminal domain MASE_03120 PF01627 Hpt domain MASE_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_03120 PF00512 His Kinase A (phospho-acceptor) domain MASE_03120 PF17149 Periplasmic sensor domain found in signal transduction proteins MASE_03120 PF00072 Response regulator receiver domain MASE_03120 PF00672 HAMP domain MASE_03140 PF00330 Aconitase family (aconitate hydratase) MASE_03140 PF11791 Aconitate B N-terminal domain MASE_03140 PF06434 Aconitate hydratase 2 N-terminus MASE_03150 PF00696 Amino acid kinase family MASE_03150 PF01842 ACT domain MASE_03160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_03160 PF00672 HAMP domain MASE_03165 PF00149 Calcineurin-like phosphoesterase MASE_03170 PF04379 ApaG domain MASE_03175 PF00398 Ribosomal RNA adenine dimethylase MASE_03180 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MASE_03185 PF00639 PPIC-type PPIASE domain MASE_03185 PF09312 SurA N-terminal domain MASE_03190 PF04453 LPS transport system D MASE_03190 PF03968 OstA-like protein MASE_03195 PF00226 DnaJ domain MASE_03195 PF05099 Tellurite resistance protein TerB MASE_03210 PF10411 Disulfide bond isomerase protein N-terminus MASE_03210 PF13098 Thioredoxin-like domain MASE_03215 PF17768 RecJ OB domain MASE_03215 PF02272 DHHA1 domain MASE_03215 PF01368 DHH family MASE_03225 PF11967 Recombination protein O N terminal MASE_03225 PF02565 Recombination protein O C terminal MASE_03230 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MASE_03235 PF01648 4'-phosphopantetheinyl transferase superfamily MASE_03240 PF05958 tRNA (Uracil-5-)-methyltransferase MASE_03245 PF13291 ACT domain MASE_03245 PF04607 Region found in RelA / SpoT proteins MASE_03245 PF02824 TGS domain MASE_03250 PF03819 MazG nucleotide pyrophosphohydrolase domain MASE_03260 PF07715 TonB-dependent Receptor Plug Domain MASE_03260 PF00593 TonB dependent receptor MASE_03260 PF07660 Secretin and TonB N terminus short domain MASE_03275 PF00593 TonB dependent receptor MASE_03275 PF07715 TonB-dependent Receptor Plug Domain MASE_03290 PF00572 Ribosomal protein L13 MASE_03295 PF00380 Ribosomal protein S9/S16 MASE_03300 PF00355 Rieske [2Fe-2S] domain MASE_03300 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MASE_03305 PF00032 Cytochrome b(C-terminal)/b6/petD MASE_03305 PF00033 Cytochrome b/b6/petB MASE_03310 PF02167 Cytochrome C1 family MASE_03315 PF00043 Glutathione S-transferase, C-terminal domain MASE_03315 PF02798 Glutathione S-transferase, N-terminal domain MASE_03320 PF04386 Stringent starvation protein B MASE_03335 PF00072 Response regulator receiver domain MASE_03335 PF00486 Transcriptional regulatory protein, C terminal MASE_03340 PF03448 MgtE intracellular N domain MASE_03340 PF01769 Divalent cation transporter MASE_03340 PF00571 CBS domain MASE_03345 PF00381 PTS HPr component phosphorylation site MASE_03350 PF03668 P-loop ATPase protein family MASE_03355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MASE_03360 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MASE_03365 PF00309 Sigma-54 factor, Activator interacting domain (AID) MASE_03365 PF04963 Sigma-54 factor, core binding domain MASE_03365 PF04552 Sigma-54, DNA binding domain MASE_03370 PF00005 ABC transporter MASE_03370 PF12399 Branched-chain amino acid ATP-binding cassette transporter MASE_03375 PF03968 OstA-like protein MASE_03390 PF01380 SIS domain MASE_03390 PF00571 CBS domain MASE_03395 PF01699 Sodium/calcium exchanger protein MASE_03400 PF00005 ABC transporter MASE_03405 PF02405 Permease MlaE MASE_03410 PF02470 MlaD protein MASE_03415 PF05494 MlaC protein MASE_03425 PF01722 BolA-like protein MASE_03430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MASE_03435 PF13180 PDZ domain MASE_03440 PF13180 PDZ domain MASE_03440 PF00595 PDZ domain MASE_03450 PF03969 AFG1-like ATPase MASE_03455 PF01709 Transcriptional regulator MASE_03480 PF00881 Nitroreductase family MASE_03490 PF14403 Circularly permuted ATP-grasp type 2 MASE_03495 PF08379 Bacterial transglutaminase-like N-terminal region MASE_03495 PF01841 Transglutaminase-like superfamily MASE_03500 PF14403 Circularly permuted ATP-grasp type 2 MASE_03500 PF04168 A predicted alpha-helical domain with a conserved ER motif. MASE_03515 PF02355 Protein export membrane protein MASE_03515 PF07549 SecD/SecF GG Motif MASE_03520 PF00999 Sodium/hydrogen exchanger family MASE_03520 PF03471 Transporter associated domain MASE_03520 PF02080 TrkA-C domain MASE_03530 PF07715 TonB-dependent Receptor Plug Domain MASE_03530 PF00593 TonB dependent receptor MASE_03535 PF00892 EamA-like transporter family MASE_03545 PF00072 Response regulator receiver domain MASE_03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_03545 PF00512 His Kinase A (phospho-acceptor) domain MASE_03545 PF09308 LuxQ, periplasmic MASE_03550 PF13458 Periplasmic binding protein MASE_03565 PF02772 S-adenosylmethionine synthetase, central domain MASE_03565 PF02773 S-adenosylmethionine synthetase, C-terminal domain MASE_03565 PF00438 S-adenosylmethionine synthetase, N-terminal domain MASE_03570 PF02779 Transketolase, pyrimidine binding domain MASE_03570 PF02780 Transketolase, C-terminal domain MASE_03570 PF00456 Transketolase, thiamine diphosphate binding domain MASE_03575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MASE_03575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MASE_03580 PF00162 Phosphoglycerate kinase MASE_03585 PF00274 Fructose-bisphosphate aldolase class-I MASE_03590 PF01219 Prokaryotic diacylglycerol kinase MASE_03595 PF08019 Phosphoethanolamine transferase EptA/EptB MASE_03595 PF00884 Sulfatase MASE_03600 PF00072 Response regulator receiver domain MASE_03600 PF00486 Transcriptional regulatory protein, C terminal MASE_03605 PF00672 HAMP domain MASE_03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_03605 PF00512 His Kinase A (phospho-acceptor) domain MASE_03615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MASE_03615 PF00529 HlyD membrane-fusion protein of T1SS MASE_03635 PF02321 Outer membrane efflux protein MASE_03645 PF07676 WD40-like Beta Propeller Repeat MASE_03645 PF00326 Prolyl oligopeptidase family MASE_03655 PF02541 Ppx/GppA phosphatase family MASE_03660 PF02503 Polyphosphate kinase middle domain MASE_03660 PF13090 Polyphosphate kinase C-terminal domain 2 MASE_03660 PF17941 Polyphosphate kinase C-terminal domain 1 MASE_03660 PF13089 Polyphosphate kinase N-terminal domain MASE_03665 PF01842 ACT domain MASE_03670 PF00528 Binding-protein-dependent transport system inner membrane component MASE_03675 PF00528 Binding-protein-dependent transport system inner membrane component MASE_03680 PF00005 ABC transporter MASE_03685 PF01895 PhoU domain MASE_03690 PF01384 Phosphate transporter family MASE_03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_03700 PF03466 LysR substrate binding domain MASE_03725 PF03006 Haemolysin-III related MASE_03735 PF01047 MarR family MASE_03740 PF02566 OsmC-like protein MASE_03745 PF01433 Peptidase family M1 domain MASE_03755 PF09186 Domain of unknown function (DUF1949) MASE_03755 PF01205 Uncharacterized protein family UPF0029 MASE_03765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_03765 PF08447 PAS fold MASE_03765 PF13426 PAS domain MASE_03775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_03775 PF03466 LysR substrate binding domain MASE_03780 PF00248 Aldo/keto reductase family MASE_03790 PF00149 Calcineurin-like phosphoesterase MASE_03790 PF12320 Type 5 capsule protein repressor C-terminal domain MASE_03795 PF13476 AAA domain MASE_03815 PF00535 Glycosyl transferase family 2 MASE_03820 PF00072 Response regulator receiver domain MASE_03820 PF00486 Transcriptional regulatory protein, C terminal MASE_03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_03825 PF00672 HAMP domain MASE_03825 PF00512 His Kinase A (phospho-acceptor) domain MASE_03830 PF00375 Sodium:dicarboxylate symporter family MASE_03835 PF00491 Arginase family MASE_03840 PF01979 Amidohydrolase family MASE_03845 PF00392 Bacterial regulatory proteins, gntR family MASE_03845 PF07702 UTRA domain MASE_03855 PF00221 Aromatic amino acid lyase MASE_03880 PF00924 Mechanosensitive ion channel MASE_03885 PF00544 Pectate lyase MASE_03895 PF07690 Major Facilitator Superfamily MASE_03940 PF02384 N-6 DNA Methylase MASE_03980 PF03150 Di-haem cytochrome c peroxidase MASE_04010 PF04172 LrgB-like family MASE_04015 PF00072 Response regulator receiver domain MASE_04040 PF06969 HemN C-terminal domain MASE_04040 PF04055 Radical SAM superfamily MASE_04045 PF01725 Ham1 family MASE_04050 PF00271 Helicase conserved C-terminal domain MASE_04050 PF00270 DEAD/DEAH box helicase MASE_04065 PF12627 Probable RNA and SrmB- binding site of polymerase A MASE_04065 PF01743 Poly A polymerase head domain MASE_04070 PF13401 AAA domain MASE_04070 PF01471 Putative peptidoglycan binding domain MASE_04080 PF01966 HD domain MASE_04080 PF11871 Domain of unknown function (DUF3391) MASE_04085 PF00694 Aconitase C-terminal domain MASE_04100 PF00180 Isocitrate/isopropylmalate dehydrogenase MASE_04105 PF08502 LeuA allosteric (dimerisation) domain MASE_04105 PF00682 HMGL-like MASE_04130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MASE_04130 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MASE_04135 PF14592 Chondroitinase B MASE_04140 PF05426 Alginate lyase MASE_04140 PF07940 Heparinase II/III-like protein MASE_04150 PF07690 Major Facilitator Superfamily MASE_04155 PF00294 pfkB family carbohydrate kinase MASE_04160 PF01081 KDPG and KHG aldolase MASE_04165 PF00392 Bacterial regulatory proteins, gntR family MASE_04165 PF07729 FCD domain MASE_04170 PF08787 Alginate lyase MASE_04185 PF08787 Alginate lyase MASE_04190 PF00113 Enolase, C-terminal TIM barrel domain MASE_04190 PF03952 Enolase, N-terminal domain MASE_04195 PF06418 CTP synthase N-terminus MASE_04195 PF00117 Glutamine amidotransferase class-I MASE_04200 PF00488 MutS domain V MASE_04200 PF05188 MutS domain II MASE_04200 PF05190 MutS family domain IV MASE_04200 PF01624 MutS domain I MASE_04200 PF05192 MutS domain III MASE_04205 PF02464 Competence-damaged protein MASE_04210 PF00154 recA bacterial DNA recombination protein MASE_04215 PF00005 ABC transporter MASE_04220 PF12679 ABC-2 family transporter protein MASE_04235 PF00005 ABC transporter MASE_04240 PF03379 CcmB protein MASE_04245 PF01578 Cytochrome C assembly protein MASE_04250 PF04995 Heme exporter protein D (CcmD) MASE_04255 PF03100 CcmE MASE_04260 PF01578 Cytochrome C assembly protein MASE_04260 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MASE_04265 PF08534 Redoxin MASE_04270 PF03918 Cytochrome C biogenesis protein MASE_04280 PF04333 MlaA lipoprotein MASE_04285 PF16363 GDP-mannose 4,6 dehydratase MASE_04295 PF00854 POT family MASE_04305 PF00005 ABC transporter MASE_04315 PF02563 Polysaccharide biosynthesis/export protein MASE_04315 PF10531 SLBB domain MASE_04325 PF00953 Glycosyl transferase family 4 MASE_04330 PF00535 Glycosyl transferase family 2 MASE_04340 PF00483 Nucleotidyl transferase MASE_04345 PF10531 SLBB domain MASE_04350 PF18324 Hypothetical protein TT1725 MASE_04350 PF00180 Isocitrate/isopropylmalate dehydrogenase MASE_04365 PF11892 Domain of unknown function (DUF3412) MASE_04365 PF03641 Possible lysine decarboxylase MASE_04365 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MASE_04370 PF00072 Response regulator receiver domain MASE_04370 PF00990 Diguanylate cyclase, GGDEF domain MASE_04375 PF14489 QueF-like protein MASE_04375 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MASE_04380 PF07348 Syd protein (SUKH-2) MASE_04415 PF00849 RNA pseudouridylate synthase MASE_04420 PF00258 Flavodoxin MASE_04425 PF00132 Bacterial transferase hexapeptide (six repeats) MASE_04425 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MASE_04425 PF14602 Hexapeptide repeat of succinyl-transferase MASE_04430 PF01909 Nucleotidyltransferase domain MASE_04430 PF08335 GlnD PII-uridylyltransferase MASE_04430 PF01966 HD domain MASE_04435 PF00557 Metallopeptidase family M24 MASE_04440 PF00318 Ribosomal protein S2 MASE_04445 PF00889 Elongation factor TS MASE_04450 PF00696 Amino acid kinase family MASE_04455 PF01765 Ribosome recycling factor MASE_04460 PF01255 Putative undecaprenyl diphosphate synthase MASE_04470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MASE_04470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MASE_04470 PF13288 DXP reductoisomerase C-terminal domain MASE_04475 PF17820 PDZ domain MASE_04475 PF02163 Peptidase family M50 MASE_04480 PF01103 Surface antigen MASE_04480 PF07244 Surface antigen variable number repeat MASE_04485 PF03938 Outer membrane protein (OmpH-like) MASE_04490 PF07977 FabA-like domain MASE_04495 PF00132 Bacterial transferase hexapeptide (six repeats) MASE_04495 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MASE_04500 PF02684 Lipid-A-disaccharide synthetase MASE_04505 PF01351 Ribonuclease HII MASE_04510 PF07733 Bacterial DNA polymerase III alpha NTPase domain MASE_04510 PF14579 Helix-hairpin-helix motif MASE_04510 PF02811 PHP domain MASE_04510 PF01336 OB-fold nucleic acid binding domain MASE_04510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MASE_04515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MASE_04520 PF09179 TilS substrate binding domain MASE_04520 PF11734 TilS substrate C-terminal domain MASE_04520 PF01171 PP-loop family MASE_04525 PF03707 Bacterial signalling protein N terminal repeat MASE_04525 PF00563 EAL domain MASE_04525 PF00990 Diguanylate cyclase, GGDEF domain MASE_04530 PF02254 TrkA-N domain MASE_04530 PF00999 Sodium/hydrogen exchanger family MASE_04530 PF02080 TrkA-C domain MASE_04540 PF14437 MafB19-like deaminase MASE_04550 PF01464 Transglycosylase SLT domain MASE_04550 PF00497 Bacterial extracellular solute-binding proteins, family 3 MASE_04555 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MASE_04555 PF02769 AIR synthase related protein, C-terminal domain MASE_04555 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MASE_04560 PF01713 Smr domain MASE_04580 PF00691 OmpA family MASE_04580 PF05736 OprF membrane domain MASE_04585 PF00664 ABC transporter transmembrane region MASE_04585 PF00005 ABC transporter MASE_04585 PF03412 Peptidase C39 family MASE_04590 PF00529 HlyD membrane-fusion protein of T1SS MASE_04590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MASE_04595 PF00196 Bacterial regulatory proteins, luxR family MASE_04595 PF00072 Response regulator receiver domain MASE_04635 PF00072 Response regulator receiver domain MASE_04635 PF01584 CheW-like domain MASE_04640 PF03705 CheR methyltransferase, all-alpha domain MASE_04640 PF01739 CheR methyltransferase, SAM binding domain MASE_04645 PF01739 CheR methyltransferase, SAM binding domain MASE_04645 PF03705 CheR methyltransferase, all-alpha domain MASE_04650 PF00460 Flagella basal body rod protein MASE_04655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MASE_04655 PF00460 Flagella basal body rod protein MASE_04660 PF13861 FlgD Tudor-like domain MASE_04660 PF03963 Flagellar hook capping protein - N-terminal region MASE_04660 PF13860 FlgD Ig-like domain MASE_04665 PF07559 Flagellar basal body protein FlaE MASE_04665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MASE_04665 PF00460 Flagella basal body rod protein MASE_04670 PF00460 Flagella basal body rod protein MASE_04670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MASE_04675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MASE_04675 PF00460 Flagella basal body rod protein MASE_04680 PF02107 Flagellar L-ring protein MASE_04685 PF02119 Flagellar P-ring protein MASE_04690 PF10135 Rod binding protein MASE_04690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MASE_04705 PF00700 Bacterial flagellin C-terminal helical region MASE_04705 PF07196 Flagellin hook IN motif MASE_04705 PF00669 Bacterial flagellin N-terminal helical region MASE_04710 PF00669 Bacterial flagellin N-terminal helical region MASE_04710 PF07196 Flagellin hook IN motif MASE_04710 PF00700 Bacterial flagellin C-terminal helical region MASE_04715 PF03646 FlaG protein MASE_04720 PF02465 Flagellar hook-associated protein 2 N-terminus MASE_04720 PF07195 Flagellar hook-associated protein 2 C-terminus MASE_04720 PF07196 Flagellin hook IN motif MASE_04740 PF00535 Glycosyl transferase family 2 MASE_04760 PF01501 Glycosyl transferase family 8 MASE_04770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MASE_04775 PF02719 Polysaccharide biosynthesis protein MASE_04790 PF04991 LicD family MASE_04795 PF08666 SAF domain MASE_04795 PF03102 NeuB family MASE_04805 PF02348 Cytidylyltransferase MASE_04810 PF01467 Cytidylyltransferase-like MASE_04815 PF00700 Bacterial flagellin C-terminal helical region MASE_04815 PF00669 Bacterial flagellin N-terminal helical region MASE_04820 PF02954 Bacterial regulatory protein, Fis family MASE_04820 PF00158 Sigma-54 interaction domain MASE_04820 PF00072 Response regulator receiver domain MASE_04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_04825 PF00512 His Kinase A (phospho-acceptor) domain MASE_04825 PF00989 PAS fold MASE_04830 PF00158 Sigma-54 interaction domain MASE_04830 PF00072 Response regulator receiver domain MASE_04830 PF02954 Bacterial regulatory protein, Fis family MASE_04835 PF02049 Flagellar hook-basal body complex protein FliE MASE_04840 PF08345 Flagellar M-ring protein C-terminal MASE_04840 PF01514 Secretory protein of YscJ/FliF family MASE_04845 PF14841 FliG middle domain MASE_04845 PF01706 FliG C-terminal domain MASE_04845 PF14842 FliG N-terminal domain MASE_04855 PF18269 T3SS EscN ATPase C-terminal domain MASE_04855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MASE_04875 PF02154 Flagellar motor switch protein FliM MASE_04875 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MASE_04880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MASE_04885 PF04347 Flagellar biosynthesis protein, FliO MASE_04890 PF00813 FliP family MASE_04895 PF01313 Bacterial export proteins, family 3 MASE_04900 PF01311 Bacterial export proteins, family 1 MASE_04905 PF01312 FlhB HrpN YscU SpaS Family MASE_04915 PF03734 L,D-transpeptidase catalytic domain MASE_04920 PF00771 FHIPEP family MASE_04925 PF00448 SRP54-type protein, GTPase domain MASE_04930 PF10609 NUBPL iron-transfer P-loop NTPase MASE_04935 PF04539 Sigma-70 region 3 MASE_04935 PF04542 Sigma-70 region 2 MASE_04935 PF04545 Sigma-70, region 4 MASE_04940 PF00072 Response regulator receiver domain MASE_04945 PF04344 Chemotaxis phosphatase, CheZ MASE_04965 PF13614 AAA domain MASE_04975 PF01584 CheW-like domain MASE_04985 PF04204 Homoserine O-succinyltransferase MASE_04990 PF02310 B12 binding domain MASE_04990 PF02965 Vitamin B12 dependent methionine synthase, activation domain MASE_04990 PF00809 Pterin binding enzyme MASE_04990 PF02574 Homocysteine S-methyltransferase MASE_04990 PF02607 B12 binding domain MASE_04995 PF02574 Homocysteine S-methyltransferase MASE_04995 PF00809 Pterin binding enzyme MASE_04995 PF02965 Vitamin B12 dependent methionine synthase, activation domain MASE_04995 PF02607 B12 binding domain MASE_04995 PF02310 B12 binding domain MASE_05005 PF06865 Pyrimidine/purine nucleoside phosphorylase MASE_05010 PF00672 HAMP domain MASE_05010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_05010 PF02743 Cache domain MASE_05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_05015 PF03466 LysR substrate binding domain MASE_05020 PF03466 LysR substrate binding domain MASE_05020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_05025 PF00484 Carbonic anhydrase MASE_05030 PF01740 STAS domain MASE_05030 PF00916 Sulfate permease family MASE_05040 PF00440 Bacterial regulatory proteins, tetR family MASE_05040 PF13977 BetI-type transcriptional repressor, C-terminal MASE_05045 PF05649 Peptidase family M13 MASE_05045 PF01431 Peptidase family M13 MASE_05055 PF02631 RecX family MASE_05060 PF01411 tRNA synthetases class II (A) MASE_05060 PF02272 DHHA1 domain MASE_05060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MASE_05065 PF02599 Global regulator protein family MASE_05070 PF03061 Thioesterase superfamily MASE_05080 PF02436 Conserved carboxylase domain MASE_05080 PF00364 Biotin-requiring enzyme MASE_05080 PF00682 HMGL-like MASE_05085 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit MASE_05090 PF00005 ABC transporter MASE_05095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MASE_05095 PF00005 ABC transporter MASE_05100 PF12911 N-terminal TM domain of oligopeptide transport permease C MASE_05100 PF00528 Binding-protein-dependent transport system inner membrane component MASE_05105 PF00528 Binding-protein-dependent transport system inner membrane component MASE_05110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MASE_05115 PF02954 Bacterial regulatory protein, Fis family MASE_05115 PF00158 Sigma-54 interaction domain MASE_05120 PF04012 PspA/IM30 family MASE_05135 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MASE_05140 PF00158 Sigma-54 interaction domain MASE_05140 PF18024 Helix-turn-helix domain MASE_05150 PF14497 Glutathione S-transferase, C-terminal domain MASE_05150 PF02798 Glutathione S-transferase, N-terminal domain MASE_05155 PF01037 Lrp/AsnC ligand binding domain MASE_05160 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MASE_05160 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MASE_05170 PF03301 Tryptophan 2,3-dioxygenase MASE_05175 PF00593 TonB dependent receptor MASE_05180 PF13181 Tetratricopeptide repeat MASE_05185 PF07715 TonB-dependent Receptor Plug Domain MASE_05185 PF00593 TonB dependent receptor MASE_05225 PF01618 MotA/TolQ/ExbB proton channel family MASE_05230 PF01618 MotA/TolQ/ExbB proton channel family MASE_05235 PF02472 Biopolymer transport protein ExbD/TolR MASE_05240 PF03544 Gram-negative bacterial TonB protein C-terminal MASE_05250 PF08351 Domain of unknown function (DUF1726) MASE_05250 PF05127 Helicase MASE_05250 PF13718 GNAT acetyltransferase 2 MASE_05250 PF17176 tRNA-binding domain MASE_05275 PF01636 Phosphotransferase enzyme family MASE_05285 PF00583 Acetyltransferase (GNAT) family MASE_05300 PF03466 LysR substrate binding domain MASE_05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_05305 PF07690 Major Facilitator Superfamily MASE_05310 PF00296 Luciferase-like monooxygenase MASE_05315 PF00248 Aldo/keto reductase family MASE_05330 PF13533 Biotin-lipoyl like MASE_05335 PF01047 MarR family MASE_05340 PF04397 LytTr DNA-binding domain MASE_05340 PF00072 Response regulator receiver domain MASE_05345 PF06580 Histidine kinase MASE_05345 PF07694 5TMR of 5TMR-LYT MASE_05350 PF02554 Carbon starvation protein CstA MASE_05355 PF03144 Elongation factor Tu domain 2 MASE_05355 PF16658 Class II release factor RF3, C-terminal domain MASE_05355 PF00009 Elongation factor Tu GTP binding domain MASE_05360 PF00750 tRNA synthetases class I (R) MASE_05360 PF05746 DALR anticodon binding domain MASE_05360 PF03485 Arginyl tRNA synthetase N terminal domain MASE_05370 PF13181 Tetratricopeptide repeat MASE_05385 PF00072 Response regulator receiver domain MASE_05385 PF00196 Bacterial regulatory proteins, luxR family MASE_05395 PF00291 Pyridoxal-phosphate dependent enzyme MASE_05405 PF17158 Membrane-associated sensor, integral membrane domain MASE_05405 PF00990 Diguanylate cyclase, GGDEF domain MASE_05410 PF04224 Protein of unknown function, DUF417 MASE_05425 PF03466 LysR substrate binding domain MASE_05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_05430 PF05368 NmrA-like family MASE_05440 PF00487 Fatty acid desaturase MASE_05445 PF00970 Oxidoreductase FAD-binding domain MASE_05445 PF00042 Globin MASE_05445 PF00175 Oxidoreductase NAD-binding domain MASE_05450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MASE_05460 PF00472 RF-1 domain MASE_05460 PF03462 PCRF domain MASE_05465 PF00152 tRNA synthetases class II (D, K and N) MASE_05465 PF01336 OB-fold nucleic acid binding domain MASE_05470 PF02558 Ketopantoate reductase PanE/ApbA MASE_05470 PF08546 Ketopantoate reductase PanE/ApbA C terminal MASE_05475 PF00849 RNA pseudouridylate synthase MASE_05485 PF00675 Insulinase (Peptidase family M16) MASE_05485 PF05193 Peptidase M16 inactive domain MASE_05490 PF04262 Glutamate-cysteine ligase MASE_05515 PF01713 Smr domain MASE_05520 PF05175 Methyltransferase small domain MASE_05525 PF01264 Chorismate synthase MASE_05535 PF04293 SpoVR like protein MASE_05540 PF04285 Protein of unknown function (DUF444) MASE_05545 PF06798 PrkA serine protein kinase C-terminal domain MASE_05545 PF08298 PrkA AAA domain MASE_05555 PF00462 Glutaredoxin MASE_05585 PF04324 BFD-like [2Fe-2S] binding domain MASE_05590 PF00578 AhpC/TSA family MASE_05590 PF10417 C-terminal domain of 1-Cys peroxiredoxin MASE_05595 PF00929 Exonuclease MASE_05600 PF00691 OmpA family MASE_05600 PF18393 MotY N-terminal domain MASE_05605 PF03009 Glycerophosphoryl diester phosphodiesterase family MASE_05610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MASE_05615 PF00106 short chain dehydrogenase MASE_05620 PF00313 'Cold-shock' DNA-binding domain MASE_05630 PF04389 Peptidase family M28 MASE_05630 PF02225 PA domain MASE_05635 PF00633 Helix-hairpin-helix motif MASE_05635 PF10576 Iron-sulfur binding domain of endonuclease III MASE_05635 PF00730 HhH-GPD superfamily base excision DNA repair protein MASE_05640 PF02508 Rnf-Nqr subunit, membrane protein MASE_05645 PF04205 FMN-binding domain MASE_05650 PF03116 NQR2, RnfD, RnfE family MASE_05655 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MASE_05655 PF12838 4Fe-4S dicluster domain MASE_05655 PF13375 RnfC Barrel sandwich hybrid domain MASE_05655 PF10531 SLBB domain MASE_05660 PF01554 MatE MASE_05665 PF00271 Helicase conserved C-terminal domain MASE_05665 PF04851 Type III restriction enzyme, res subunit MASE_05665 PF17757 UvrB interaction domain MASE_05665 PF12344 Ultra-violet resistance protein B MASE_05665 PF02151 UvrB/uvrC motif MASE_05675 PF06508 Queuosine biosynthesis protein QueC MASE_05680 PF04055 Radical SAM superfamily MASE_05690 PF00733 Asparagine synthase MASE_05690 PF13537 Glutamine amidotransferase domain MASE_05710 PF03600 Citrate transporter MASE_05710 PF02080 TrkA-C domain MASE_05715 PF00009 Elongation factor Tu GTP binding domain MASE_05735 PF01507 Phosphoadenosine phosphosulfate reductase family MASE_05740 PF00474 Sodium:solute symporter family MASE_05745 PF00072 Response regulator receiver domain MASE_05745 PF00990 Diguanylate cyclase, GGDEF domain MASE_05755 PF04542 Sigma-70 region 2 MASE_05755 PF08281 Sigma-70, region 4 MASE_05770 PF00092 von Willebrand factor type A domain MASE_05770 PF07584 Aerotolerance regulator N-terminal MASE_05775 PF00092 von Willebrand factor type A domain MASE_05785 PF01882 Protein of unknown function DUF58 MASE_05790 PF17863 AAA lid domain MASE_05790 PF07726 ATPase family associated with various cellular activities (AAA) MASE_05795 PF00108 Thiolase, N-terminal domain MASE_05795 PF02803 Thiolase, C-terminal domain MASE_05800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MASE_05800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MASE_05800 PF00378 Enoyl-CoA hydratase/isomerase MASE_05815 PF00563 EAL domain MASE_05815 PF00990 Diguanylate cyclase, GGDEF domain MASE_05815 PF03707 Bacterial signalling protein N terminal repeat MASE_05820 PF05193 Peptidase M16 inactive domain MASE_05820 PF00675 Insulinase (Peptidase family M16) MASE_05825 PF00300 Histidine phosphatase superfamily (branch 1) MASE_05835 PF00571 CBS domain MASE_05835 PF03471 Transporter associated domain MASE_05835 PF01595 Cyclin M transmembrane N-terminal domain MASE_05840 PF01578 Cytochrome C assembly protein MASE_05845 PF02978 Signal peptide binding domain MASE_05845 PF02881 SRP54-type protein, helical bundle domain MASE_05845 PF00448 SRP54-type protein, GTPase domain MASE_05885 PF00873 AcrB/AcrD/AcrF family MASE_05890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MASE_05895 PF00005 ABC transporter MASE_05895 PF00664 ABC transporter transmembrane region MASE_05910 PF00886 Ribosomal protein S16 MASE_05915 PF01782 RimM N-terminal domain MASE_05915 PF05239 PRC-barrel domain MASE_05920 PF01746 tRNA (Guanine-1)-methyltransferase MASE_05925 PF01245 Ribosomal protein L19 MASE_05930 PF03458 UPF0126 domain MASE_05935 PF00378 Enoyl-CoA hydratase/isomerase MASE_05940 PF00793 DAHP synthetase I family MASE_05945 PF01817 Chorismate mutase type II MASE_05945 PF02153 Prephenate dehydrogenase MASE_05970 PF17151 Periplasmic sensor domain MASE_05970 PF00990 Diguanylate cyclase, GGDEF domain MASE_05975 PF01817 Chorismate mutase type II MASE_05975 PF00800 Prephenate dehydratase MASE_05980 PF00072 Response regulator receiver domain MASE_05985 PF01253 Translation initiation factor SUI1 MASE_05995 PF00072 Response regulator receiver domain MASE_05995 PF00486 Transcriptional regulatory protein, C terminal MASE_06015 PF00563 EAL domain MASE_06015 PF00990 Diguanylate cyclase, GGDEF domain MASE_06015 PF03707 Bacterial signalling protein N terminal repeat MASE_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_06025 PF00512 His Kinase A (phospho-acceptor) domain MASE_06035 PF00072 Response regulator receiver domain MASE_06035 PF00158 Sigma-54 interaction domain MASE_06050 PF00152 tRNA synthetases class II (D, K and N) MASE_06050 PF01336 OB-fold nucleic acid binding domain MASE_06050 PF02938 GAD domain MASE_06055 PF00293 NUDIX domain MASE_06060 PF02075 Crossover junction endodeoxyribonuclease RuvC MASE_06070 PF05496 Holliday junction DNA helicase RuvB P-loop domain MASE_06070 PF17864 RuvB AAA lid domain MASE_06070 PF05491 RuvB C-terminal winged helix domain MASE_06075 PF03061 Thioesterase superfamily MASE_06080 PF01618 MotA/TolQ/ExbB proton channel family MASE_06085 PF02472 Biopolymer transport protein ExbD/TolR MASE_06095 PF07676 WD40-like Beta Propeller Repeat MASE_06095 PF04052 TolB amino-terminal domain MASE_06100 PF00691 OmpA family MASE_06105 PF13174 Tetratricopeptide repeat MASE_06105 PF16331 TolA binding protein trimerisation MASE_06110 PF02445 Quinolinate synthetase A protein MASE_06120 PF01734 Patatin-like phospholipase MASE_06125 PF08546 Ketopantoate reductase PanE/ApbA C terminal MASE_06125 PF02558 Ketopantoate reductase PanE/ApbA MASE_06140 PF02774 Semialdehyde dehydrogenase, dimerisation domain MASE_06140 PF01118 Semialdehyde dehydrogenase, NAD binding domain MASE_06145 PF01292 Prokaryotic cytochrome b561 MASE_06150 PF03707 Bacterial signalling protein N terminal repeat MASE_06150 PF00990 Diguanylate cyclase, GGDEF domain MASE_06150 PF00563 EAL domain MASE_06165 PF01863 Protein of unknown function DUF45 MASE_06175 PF00873 AcrB/AcrD/AcrF family MASE_06185 PF00440 Bacterial regulatory proteins, tetR family MASE_06185 PF08361 MAATS-type transcriptional repressor, C-terminal region MASE_06190 PF00593 TonB dependent receptor MASE_06190 PF07715 TonB-dependent Receptor Plug Domain MASE_06200 PF00873 AcrB/AcrD/AcrF family MASE_06210 PF00990 Diguanylate cyclase, GGDEF domain MASE_06220 PF02470 MlaD protein MASE_06225 PF04403 Paraquat-inducible protein A MASE_06235 PF00152 tRNA synthetases class II (D, K and N) MASE_06235 PF01336 OB-fold nucleic acid binding domain MASE_06245 PF01699 Sodium/calcium exchanger protein MASE_06250 PF18030 RimK PreATP-grasp domain MASE_06250 PF08443 RimK-like ATP-grasp domain MASE_06270 PF00202 Aminotransferase class-III MASE_06275 PF04055 Radical SAM superfamily MASE_06275 PF06968 Biotin and Thiamin Synthesis associated domain MASE_06280 PF00155 Aminotransferase class I and II MASE_06285 PF08241 Methyltransferase domain MASE_06295 PF03575 Peptidase family S51 MASE_06300 PF01451 Low molecular weight phosphotyrosine protein phosphatase MASE_06305 PF01032 FecCD transport family MASE_06310 PF00005 ABC transporter MASE_06315 PF01474 Class-II DAHP synthetase family MASE_06320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_06320 PF02702 Osmosensitive K+ channel His kinase sensor domain MASE_06320 PF00512 His Kinase A (phospho-acceptor) domain MASE_06320 PF13493 Domain of unknown function (DUF4118) MASE_06325 PF00486 Transcriptional regulatory protein, C terminal MASE_06325 PF00072 Response regulator receiver domain MASE_06330 PF02254 TrkA-N domain MASE_06330 PF02080 TrkA-C domain MASE_06335 PF02386 Cation transport protein MASE_06350 PF00664 ABC transporter transmembrane region MASE_06350 PF00005 ABC transporter MASE_06355 PF06463 Molybdenum Cofactor Synthesis C MASE_06355 PF04055 Radical SAM superfamily MASE_06365 PF00486 Transcriptional regulatory protein, C terminal MASE_06365 PF00072 Response regulator receiver domain MASE_06370 PF00749 tRNA synthetases class I (E and Q), catalytic domain MASE_06390 PF01207 Dihydrouridine synthase (Dus) MASE_06400 PF13472 GDSL-like Lipase/Acylhydrolase family MASE_06405 PF00005 ABC transporter MASE_06415 PF08338 Domain of unknown function (DUF1731) MASE_06415 PF01370 NAD dependent epimerase/dehydratase family MASE_06420 PF02152 Dihydroneopterin aldolase MASE_06425 PF01594 AI-2E family transporter MASE_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_06430 PF08918 PhoQ Sensor MASE_06435 PF00486 Transcriptional regulatory protein, C terminal MASE_06435 PF00072 Response regulator receiver domain MASE_06450 PF03795 YCII-related domain MASE_06455 PF00290 Tryptophan synthase alpha chain MASE_06460 PF00291 Pyridoxal-phosphate dependent enzyme MASE_06465 PF00218 Indole-3-glycerol phosphate synthase MASE_06465 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MASE_06470 PF00591 Glycosyl transferase family, a/b domain MASE_06470 PF02885 Glycosyl transferase family, helical bundle domain MASE_06475 PF00117 Glutamine amidotransferase class-I MASE_06480 PF04715 Anthranilate synthase component I, N terminal region MASE_06480 PF00425 chorismate binding enzyme MASE_06495 PF01300 Telomere recombination MASE_06500 PF02616 Segregation and condensation protein ScpA MASE_06505 PF04079 Segregation and condensation complex subunit ScpB MASE_06510 PF01479 S4 domain MASE_06510 PF00849 RNA pseudouridylate synthase MASE_06515 PF00248 Aldo/keto reductase family MASE_06520 PF12464 Maltose acetyltransferase MASE_06520 PF14602 Hexapeptide repeat of succinyl-transferase MASE_06535 PF03960 ArsC family MASE_06540 PF04286 Protein of unknown function (DUF445) MASE_06545 PF05724 Thiopurine S-methyltransferase (TPMT) MASE_06550 PF04355 SmpA / OmlA family MASE_06555 PF02463 RecF/RecN/SMC N terminal domain MASE_06560 PF00210 Ferritin-like domain MASE_06575 PF00465 Iron-containing alcohol dehydrogenase MASE_06590 PF00561 alpha/beta hydrolase fold MASE_06600 PF07715 TonB-dependent Receptor Plug Domain MASE_06600 PF00593 TonB dependent receptor MASE_06605 PF00072 Response regulator receiver domain MASE_06605 PF00196 Bacterial regulatory proteins, luxR family MASE_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_06615 PF00497 Bacterial extracellular solute-binding proteins, family 3 MASE_06615 PF00512 His Kinase A (phospho-acceptor) domain MASE_06615 PF01627 Hpt domain MASE_06615 PF00072 Response regulator receiver domain MASE_06625 PF01025 GrpE MASE_06630 PF00012 Hsp70 protein MASE_06635 PF01556 DnaJ C terminal domain MASE_06635 PF00226 DnaJ domain MASE_06635 PF00684 DnaJ central domain MASE_06640 PF01322 Cytochrome C' MASE_06655 PF00563 EAL domain MASE_06655 PF13426 PAS domain MASE_06655 PF00990 Diguanylate cyclase, GGDEF domain MASE_06660 PF00501 AMP-binding enzyme MASE_06660 PF13193 AMP-binding enzyme C-terminal domain MASE_06660 PF16177 Acetyl-coenzyme A synthetase N-terminus MASE_06670 PF05173 Dihydrodipicolinate reductase, C-terminus MASE_06670 PF01113 Dihydrodipicolinate reductase, N-terminus MASE_06675 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MASE_06675 PF00117 Glutamine amidotransferase class-I MASE_06680 PF02142 MGS-like domain MASE_06680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MASE_06680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MASE_06685 PF03449 Transcription elongation factor, N-terminal MASE_06685 PF01272 Transcription elongation factor, GreA/GreB, C-term MASE_06695 PF12729 Four helix bundle sensory module for signal transduction MASE_06695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_06695 PF00672 HAMP domain MASE_06725 PF00871 Acetokinase family MASE_06730 PF07085 DRTGG domain MASE_06730 PF01515 Phosphate acetyl/butaryl transferase MASE_06735 PF01979 Amidohydrolase family MASE_06740 PF00795 Carbon-nitrogen hydrolase MASE_06745 PF03471 Transporter associated domain MASE_06745 PF00571 CBS domain MASE_06750 PF02130 Uncharacterized protein family UPF0054 MASE_06755 PF02562 PhoH-like protein MASE_06760 PF01938 TRAM domain MASE_06760 PF04055 Radical SAM superfamily MASE_06760 PF00919 Uncharacterized protein family UPF0004 MASE_06765 PF01494 FAD binding domain MASE_06805 PF00593 TonB dependent receptor MASE_06805 PF07715 TonB-dependent Receptor Plug Domain MASE_06810 PF03061 Thioesterase superfamily MASE_06815 PF01613 Flavin reductase like domain MASE_06825 PF01235 Sodium:alanine symporter family MASE_06830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MASE_06835 PF06071 Protein of unknown function (DUF933) MASE_06835 PF01926 50S ribosome-binding GTPase MASE_06840 PF01195 Peptidyl-tRNA hydrolase MASE_06845 PF01386 Ribosomal L25p family MASE_06845 PF14693 Ribosomal protein TL5, C-terminal domain MASE_06850 PF00107 Zinc-binding dehydrogenase MASE_06850 PF08240 Alcohol dehydrogenase GroES-like domain MASE_06860 PF14572 Phosphoribosyl synthetase-associated domain MASE_06860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MASE_06865 PF08544 GHMP kinases C terminal MASE_06865 PF00288 GHMP kinases N terminal domain MASE_06875 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MASE_06875 PF01488 Shikimate / quinate 5-dehydrogenase MASE_06875 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MASE_06880 PF00472 RF-1 domain MASE_06880 PF03462 PCRF domain MASE_06885 PF13847 Methyltransferase domain MASE_06885 PF17827 PrmC N-terminal domain MASE_06890 PF11849 Domain of unknown function (DUF3369) MASE_06895 PF04247 Invasion gene expression up-regulator, SirB MASE_06910 PF03466 LysR substrate binding domain MASE_06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_06920 PF04241 Protein of unknown function (DUF423) MASE_06925 PF18125 RlmM ferredoxin-like domain MASE_06925 PF01728 FtsJ-like methyltransferase MASE_06930 PF00009 Elongation factor Tu GTP binding domain MASE_06930 PF00679 Elongation factor G C-terminus MASE_06930 PF03144 Elongation factor Tu domain 2 MASE_06930 PF14492 Elongation Factor G, domain II MASE_06930 PF03764 Elongation factor G, domain IV MASE_06935 PF02560 Cyanate lyase C-terminal domain MASE_06950 PF01226 Formate/nitrite transporter MASE_06955 PF01841 Transglutaminase-like superfamily MASE_06955 PF11992 Domain of unknown function (DUF3488) MASE_06955 PF13559 Domain of unknown function (DUF4129) MASE_06965 PF07726 ATPase family associated with various cellular activities (AAA) MASE_06965 PF17863 AAA lid domain MASE_06975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MASE_06975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MASE_06975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MASE_06975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MASE_06980 PF00343 Carbohydrate phosphorylase MASE_06985 PF00563 EAL domain MASE_06985 PF00990 Diguanylate cyclase, GGDEF domain MASE_06985 PF03707 Bacterial signalling protein N terminal repeat MASE_06990 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MASE_07000 PF01906 Putative heavy-metal-binding MASE_07005 PF00375 Sodium:dicarboxylate symporter family MASE_07020 PF01546 Peptidase family M20/M25/M40 MASE_07020 PF07687 Peptidase dimerisation domain MASE_07025 PF03960 ArsC family MASE_07045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MASE_07050 PF04209 homogentisate 1,2-dioxygenase MASE_07065 PF03707 Bacterial signalling protein N terminal repeat MASE_07065 PF00563 EAL domain MASE_07065 PF00990 Diguanylate cyclase, GGDEF domain MASE_07070 PF00563 EAL domain MASE_07070 PF00990 Diguanylate cyclase, GGDEF domain MASE_07070 PF03707 Bacterial signalling protein N terminal repeat MASE_07075 PF12706 Beta-lactamase superfamily domain MASE_07080 PF00873 AcrB/AcrD/AcrF family MASE_07100 PF02525 Flavodoxin-like fold MASE_07115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MASE_07120 PF01799 [2Fe-2S] binding domain MASE_07120 PF00111 2Fe-2S iron-sulfur cluster binding domain MASE_07125 PF01638 HxlR-like helix-turn-helix MASE_07135 PF08448 PAS fold MASE_07135 PF13426 PAS domain MASE_07135 PF08447 PAS fold MASE_07135 PF00990 Diguanylate cyclase, GGDEF domain MASE_07135 PF05231 MASE1 MASE_07135 PF00563 EAL domain MASE_07145 PF01979 Amidohydrolase family MASE_07150 PF00576 HIUase/Transthyretin family MASE_07165 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MASE_07165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MASE_07170 PF01799 [2Fe-2S] binding domain MASE_07170 PF00111 2Fe-2S iron-sulfur cluster binding domain MASE_07170 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MASE_07170 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MASE_07175 PF08362 YcdC-like protein, C-terminal region MASE_07175 PF00440 Bacterial regulatory proteins, tetR family MASE_07190 PF00860 Permease family MASE_07195 PF00962 Adenosine/AMP deaminase MASE_07205 PF03707 Bacterial signalling protein N terminal repeat MASE_07205 PF00990 Diguanylate cyclase, GGDEF domain MASE_07205 PF00563 EAL domain MASE_07210 PF00990 Diguanylate cyclase, GGDEF domain MASE_07210 PF00072 Response regulator receiver domain MASE_07215 PF09308 LuxQ, periplasmic MASE_07215 PF00072 Response regulator receiver domain MASE_07215 PF00512 His Kinase A (phospho-acceptor) domain MASE_07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_07225 PF00593 TonB dependent receptor MASE_07225 PF07715 TonB-dependent Receptor Plug Domain MASE_07230 PF00860 Permease family MASE_07235 PF00962 Adenosine/AMP deaminase MASE_07245 PF07687 Peptidase dimerisation domain MASE_07245 PF01546 Peptidase family M20/M25/M40 MASE_07250 PF00266 Aminotransferase class-V MASE_07255 PF01925 Sulfite exporter TauE/SafE MASE_07265 PF01425 Amidase MASE_07310 PF03129 Anticodon binding domain MASE_07310 PF02824 TGS domain MASE_07310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MASE_07310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MASE_07315 PF00707 Translation initiation factor IF-3, C-terminal domain MASE_07315 PF05198 Translation initiation factor IF-3, N-terminal domain MASE_07320 PF01632 Ribosomal protein L35 MASE_07325 PF00453 Ribosomal protein L20 MASE_07330 PF00483 Nucleotidyl transferase MASE_07330 PF01050 Mannose-6-phosphate isomerase MASE_07335 PF02397 Bacterial sugar transferase MASE_07345 PF02563 Polysaccharide biosynthesis/export protein MASE_07345 PF18412 Outer-membrane lipoprotein Wza C-terminal domain MASE_07345 PF10531 SLBB domain MASE_07350 PF13614 AAA domain MASE_07380 PF00563 EAL domain MASE_07380 PF00990 Diguanylate cyclase, GGDEF domain MASE_07380 PF03707 Bacterial signalling protein N terminal repeat MASE_07400 PF00534 Glycosyl transferases group 1 MASE_07400 PF13477 Glycosyl transferase 4-like MASE_07410 PF00535 Glycosyl transferase family 2 MASE_07420 PF00535 Glycosyl transferase family 2 MASE_07420 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 MASE_07450 PF13579 Glycosyl transferase 4-like domain MASE_07450 PF00534 Glycosyl transferases group 1 MASE_07455 PF00535 Glycosyl transferase family 2 MASE_07465 PF01757 Acyltransferase family MASE_07470 PF01409 tRNA synthetases class II core domain (F) MASE_07470 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MASE_07475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MASE_07475 PF01588 Putative tRNA binding domain MASE_07475 PF03147 Ferredoxin-fold anticodon binding domain MASE_07475 PF03484 tRNA synthetase B5 domain MASE_07475 PF03483 B3/4 domain MASE_07480 PF00216 Bacterial DNA-binding protein MASE_07490 PF04073 Aminoacyl-tRNA editing domain MASE_07495 PF01804 Penicillin amidase MASE_07500 PF00933 Glycosyl hydrolase family 3 N terminal domain MASE_07505 PF01923 Cobalamin adenosyltransferase MASE_07515 PF00271 Helicase conserved C-terminal domain MASE_07515 PF03461 TRCF domain MASE_07515 PF17757 UvrB interaction domain MASE_07515 PF02559 CarD-like/TRCF domain MASE_07515 PF00270 DEAD/DEAH box helicase MASE_07525 PF02687 FtsX-like permease family MASE_07525 PF12704 MacB-like periplasmic core domain MASE_07535 PF08448 PAS fold MASE_07535 PF00512 His Kinase A (phospho-acceptor) domain MASE_07535 PF13188 PAS domain MASE_07535 PF00072 Response regulator receiver domain MASE_07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_07550 PF03372 Endonuclease/Exonuclease/phosphatase family MASE_07585 PF07690 Major Facilitator Superfamily MASE_07595 PF00483 Nucleotidyl transferase MASE_07615 PF00682 HMGL-like MASE_07620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MASE_07620 PF02785 Biotin carboxylase C-terminal domain MASE_07620 PF00364 Biotin-requiring enzyme MASE_07620 PF00289 Biotin carboxylase, N-terminal domain MASE_07625 PF00378 Enoyl-CoA hydratase/isomerase MASE_07630 PF01039 Carboxyl transferase domain MASE_07635 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_07635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MASE_07635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_07640 PF13411 MerR HTH family regulatory protein MASE_07645 PF00108 Thiolase, N-terminal domain MASE_07645 PF02803 Thiolase, C-terminal domain MASE_07655 PF00266 Aminotransferase class-V MASE_07670 PF00929 Exonuclease MASE_07670 PF08411 Exonuclease C-terminal MASE_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_07675 PF00672 HAMP domain MASE_07675 PF00512 His Kinase A (phospho-acceptor) domain MASE_07675 PF00072 Response regulator receiver domain MASE_07675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MASE_07675 PF01627 Hpt domain MASE_07680 PF01112 Asparaginase MASE_07690 PF02333 Phytase MASE_07705 PF12833 Helix-turn-helix domain MASE_07705 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term MASE_07715 PF11898 Domain of unknown function (DUF3418) MASE_07715 PF00270 DEAD/DEAH box helicase MASE_07715 PF04408 Helicase associated domain (HA2) MASE_07715 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MASE_07715 PF00271 Helicase conserved C-terminal domain MASE_07730 PF10672 S-adenosylmethionine-dependent methyltransferase MASE_07730 PF17785 PUA-like domain MASE_07735 PF08659 KR domain MASE_07735 PF00698 Acyl transferase domain MASE_07735 PF08240 Alcohol dehydrogenase GroES-like domain MASE_07735 PF00550 Phosphopantetheine attachment site MASE_07735 PF14765 Polyketide synthase dehydratase MASE_07735 PF16197 Ketoacyl-synthetase C-terminal extension MASE_07735 PF00109 Beta-ketoacyl synthase, N-terminal domain MASE_07735 PF02801 Beta-ketoacyl synthase, C-terminal domain MASE_07740 PF00075 RNase H MASE_07745 PF00929 Exonuclease MASE_07755 PF12792 CSS motif domain associated with EAL MASE_07755 PF00563 EAL domain MASE_07760 PF00005 ABC transporter MASE_07765 PF12704 MacB-like periplasmic core domain MASE_07765 PF02687 FtsX-like permease family MASE_07770 PF00375 Sodium:dicarboxylate symporter family MASE_07780 PF04996 Succinylarginine dihydrolase MASE_07785 PF01396 Topoisomerase DNA binding C4 zinc finger MASE_07785 PF01751 Toprim domain MASE_07785 PF01131 DNA topoisomerase MASE_07785 PF08272 Topoisomerase I zinc-ribbon-like MASE_07790 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) MASE_07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_07800 PF03466 LysR substrate binding domain MASE_07805 PF12804 MobA-like NTP transferase domain MASE_07810 PF02634 FdhD/NarQ family MASE_07815 PF00384 Molybdopterin oxidoreductase MASE_07825 PF02798 Glutathione S-transferase, N-terminal domain MASE_07835 PF03466 LysR substrate binding domain MASE_07835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_07840 PF13673 Acetyltransferase (GNAT) domain MASE_07845 PF13419 Haloacid dehalogenase-like hydrolase MASE_07850 PF00486 Transcriptional regulatory protein, C terminal MASE_07850 PF00072 Response regulator receiver domain MASE_07855 PF00672 HAMP domain MASE_07855 PF00989 PAS fold MASE_07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_07855 PF00512 His Kinase A (phospho-acceptor) domain MASE_07855 PF18698 Histidine kinase sensor domain MASE_07865 PF12111 Polyribonucleotide phosphorylase C terminal MASE_07865 PF10150 Ribonuclease E/G family MASE_07865 PF00575 S1 RNA binding domain MASE_07870 PF00849 RNA pseudouridylate synthase MASE_07870 PF01479 S4 domain MASE_07875 PF13419 Haloacid dehalogenase-like hydrolase MASE_07880 PF02545 Maf-like protein MASE_07885 PF02620 Large ribosomal RNA subunit accumulation protein YceD MASE_07890 PF01783 Ribosomal L32p protein family MASE_07895 PF02504 Fatty acid synthesis protein MASE_07900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MASE_07900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MASE_07905 PF00698 Acyl transferase domain MASE_07915 PF00550 Phosphopantetheine attachment site MASE_07920 PF02801 Beta-ketoacyl synthase, C-terminal domain MASE_07920 PF00109 Beta-ketoacyl synthase, N-terminal domain MASE_07925 PF01063 Amino-transferase class IV MASE_07930 PF02618 YceG-like family MASE_07935 PF02223 Thymidylate kinase MASE_07940 PF09115 DNA polymerase III, delta subunit, C terminal MASE_07945 PF01026 TatD related DNase MASE_07950 PF01243 Pyridoxamine 5'-phosphate oxidase MASE_07950 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MASE_07955 PF13460 NAD(P)H-binding MASE_07960 PF00990 Diguanylate cyclase, GGDEF domain MASE_07960 PF08448 PAS fold MASE_07990 PF00561 alpha/beta hydrolase fold MASE_07995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MASE_07995 PF00378 Enoyl-CoA hydratase/isomerase MASE_07995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MASE_08000 PF02803 Thiolase, C-terminal domain MASE_08000 PF00108 Thiolase, N-terminal domain MASE_08005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MASE_08005 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_08005 PF12806 Acetyl-CoA dehydrogenase C-terminal like MASE_08010 PF00561 alpha/beta hydrolase fold MASE_08025 PF04198 Putative sugar-binding domain MASE_08030 PF13419 Haloacid dehalogenase-like hydrolase MASE_08040 PF01232 Mannitol dehydrogenase Rossmann domain MASE_08040 PF08125 Mannitol dehydrogenase C-terminal domain MASE_08055 PF01979 Amidohydrolase family MASE_08060 PF07683 Cobalamin synthesis protein cobW C-terminal domain MASE_08060 PF02492 CobW/HypB/UreG, nucleotide-binding domain MASE_08065 PF01565 FAD binding domain MASE_08065 PF02913 FAD linked oxidases, C-terminal domain MASE_08065 PF13183 4Fe-4S dicluster domain MASE_08075 PF03466 LysR substrate binding domain MASE_08075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_08080 PF01575 MaoC like domain MASE_08090 PF00924 Mechanosensitive ion channel MASE_08095 PF07715 TonB-dependent Receptor Plug Domain MASE_08095 PF00593 TonB dependent receptor MASE_08100 PF01329 Pterin 4 alpha carbinolamine dehydratase MASE_08105 PF01627 Hpt domain MASE_08105 PF00072 Response regulator receiver domain MASE_08105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_08105 PF00512 His Kinase A (phospho-acceptor) domain MASE_08110 PF00072 Response regulator receiver domain MASE_08115 PF17384 RimP C-terminal SH3 domain MASE_08115 PF02576 RimP N-terminal domain MASE_08120 PF08529 NusA N-terminal domain MASE_08120 PF00575 S1 RNA binding domain MASE_08120 PF13184 NusA-like KH domain MASE_08125 PF04760 Translation initiation factor IF-2, N-terminal region MASE_08125 PF08364 Bacterial translation initiation factor IF-2 associated region MASE_08125 PF11987 Translation-initiation factor 2 MASE_08125 PF00009 Elongation factor Tu GTP binding domain MASE_08130 PF02033 Ribosome-binding factor A MASE_08135 PF09157 Pseudouridine synthase II TruB, C-terminal MASE_08135 PF16198 tRNA pseudouridylate synthase B C-terminal domain MASE_08135 PF01509 TruB family pseudouridylate synthase (N terminal domain) MASE_08140 PF00312 Ribosomal protein S15 MASE_08145 PF00563 EAL domain MASE_08145 PF03707 Bacterial signalling protein N terminal repeat MASE_08145 PF00990 Diguanylate cyclase, GGDEF domain MASE_08150 PF00849 RNA pseudouridylate synthase MASE_08150 PF01479 S4 domain MASE_08160 PF00795 Carbon-nitrogen hydrolase MASE_08160 PF00583 Acetyltransferase (GNAT) family MASE_08190 PF00578 AhpC/TSA family MASE_08190 PF10417 C-terminal domain of 1-Cys peroxiredoxin MASE_08195 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_08195 PF13192 Thioredoxin domain MASE_08200 PF00593 TonB dependent receptor MASE_08200 PF07715 TonB-dependent Receptor Plug Domain MASE_08235 PF08497 Radical SAM N-terminal MASE_08235 PF11842 Domain of unknown function (DUF3362) MASE_08235 PF04055 Radical SAM superfamily MASE_08250 PF07715 TonB-dependent Receptor Plug Domain MASE_08250 PF00593 TonB dependent receptor MASE_08255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MASE_08255 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_08265 PF13416 Bacterial extracellular solute-binding protein MASE_08275 PF00005 ABC transporter MASE_08280 PF01066 CDP-alcohol phosphatidyltransferase MASE_08290 PF01223 DNA/RNA non-specific endonuclease MASE_08330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_08330 PF03466 LysR substrate binding domain MASE_08335 PF02525 Flavodoxin-like fold MASE_08350 PF03466 LysR substrate binding domain MASE_08350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_08355 PF00593 TonB dependent receptor MASE_08355 PF07715 TonB-dependent Receptor Plug Domain MASE_08370 PF00005 ABC transporter MASE_08380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MASE_08385 PF01668 SmpB protein MASE_08390 PF03364 Polyketide cyclase / dehydrase and lipid transport MASE_08395 PF03658 RnfH family Ubiquitin MASE_08405 PF02028 BCCT, betaine/carnitine/choline family transporter MASE_08410 PF07715 TonB-dependent Receptor Plug Domain MASE_08410 PF00593 TonB dependent receptor MASE_08415 PF13181 Tetratricopeptide repeat MASE_08430 PF03618 Kinase/pyrophosphorylase MASE_08435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MASE_08435 PF02896 PEP-utilising enzyme, TIM barrel domain MASE_08435 PF00391 PEP-utilising enzyme, mobile domain MASE_08445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MASE_08450 PF01799 [2Fe-2S] binding domain MASE_08450 PF00111 2Fe-2S iron-sulfur cluster binding domain MASE_08470 PF08007 Cupin superfamily protein MASE_08475 PF00211 Adenylate and Guanylate cyclase catalytic domain MASE_08480 PF08328 Adenylosuccinate lyase C-terminal MASE_08480 PF00206 Lyase MASE_08485 PF04356 Protein of unknown function (DUF489) MASE_08495 PF00849 RNA pseudouridylate synthase MASE_08500 PF03971 Monomeric isocitrate dehydrogenase MASE_08505 PF00313 'Cold-shock' DNA-binding domain MASE_08510 PF02617 ATP-dependent Clp protease adaptor protein ClpS MASE_08515 PF07724 AAA domain (Cdc48 subfamily) MASE_08515 PF00004 ATPase family associated with various cellular activities (AAA) MASE_08515 PF17871 AAA lid domain MASE_08515 PF02861 Clp amino terminal domain, pathogenicity island component MASE_08515 PF10431 C-terminal, D2-small domain, of ClpB protein MASE_08520 PF01176 Translation initiation factor 1A / IF-1 MASE_08525 PF04377 Arginine-tRNA-protein transferase, C terminus MASE_08525 PF04376 Arginine-tRNA-protein transferase, N terminus MASE_08530 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MASE_08535 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_08540 PF04217 Protein of unknown function, DUF412 MASE_08545 PF10263 SprT-like family MASE_08545 PF17283 SprT-like zinc ribbon domain MASE_08550 PF01343 Peptidase family S49 MASE_08565 PF00881 Nitroreductase family MASE_08575 PF00710 Asparaginase, N-terminal MASE_08575 PF17763 Glutaminase/Asparaginase C-terminal domain MASE_08580 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MASE_08580 PF04055 Radical SAM superfamily MASE_08585 PF03099 Biotin/lipoate A/B protein ligase family MASE_08590 PF04359 Protein of unknown function (DUF493) MASE_08595 PF07943 Penicillin-binding protein 5, C-terminal domain MASE_08595 PF00768 D-alanyl-D-alanine carboxypeptidase MASE_08600 PF05036 Sporulation related domain MASE_08600 PF03330 Lytic transglycolase MASE_08605 PF01098 Cell cycle protein MASE_08610 PF00905 Penicillin binding protein transpeptidase domain MASE_08610 PF03717 Penicillin-binding Protein dimerisation domain MASE_08615 PF02590 Predicted SPOUT methyltransferase MASE_08625 PF01467 Cytidylyltransferase-like MASE_08630 PF06144 DNA polymerase III, delta subunit MASE_08630 PF14840 Processivity clamp loader gamma complex DNA pol III C-term MASE_08635 PF04390 Lipopolysaccharide-assembly MASE_08640 PF00133 tRNA synthetases class I (I, L, M and V) MASE_08640 PF13603 Leucyl-tRNA synthetase, Domain 2 MASE_08640 PF08264 Anticodon-binding domain of tRNA MASE_08650 PF13654 AAA domain MASE_08650 PF05362 Lon protease (S16) C-terminal proteolytic domain MASE_08665 PF00106 short chain dehydrogenase MASE_08670 PF01985 CRS1 / YhbY (CRM) domain MASE_08675 PF01728 FtsJ-like methyltransferase MASE_08680 PF00004 ATPase family associated with various cellular activities (AAA) MASE_08680 PF06480 FtsH Extracellular MASE_08680 PF17862 AAA+ lid domain MASE_08680 PF01434 Peptidase family M41 MASE_08685 PF00809 Pterin binding enzyme MASE_08690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MASE_08690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MASE_08690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MASE_08690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MASE_08695 PF00121 Triosephosphate isomerase MASE_08700 PF03840 Preprotein translocase SecG subunit MASE_08705 PF00563 EAL domain MASE_08705 PF00990 Diguanylate cyclase, GGDEF domain MASE_08705 PF03707 Bacterial signalling protein N terminal repeat MASE_08710 PF01679 Proteolipid membrane potential modulator MASE_08720 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MASE_08720 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MASE_08725 PF02142 MGS-like domain MASE_08725 PF00781 Diacylglycerol kinase catalytic domain MASE_08755 PF00474 Sodium:solute symporter family MASE_08780 PF00013 KH domain MASE_08780 PF00575 S1 RNA binding domain MASE_08780 PF01138 3' exoribonuclease family, domain 1 MASE_08780 PF03725 3' exoribonuclease family, domain 2 MASE_08780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MASE_08845 PF01979 Amidohydrolase family MASE_08925 PF07690 Major Facilitator Superfamily MASE_08940 PF03544 Gram-negative bacterial TonB protein C-terminal MASE_08960 PF07719 Tetratricopeptide repeat MASE_08960 PF13181 Tetratricopeptide repeat MASE_08975 PF02463 RecF/RecN/SMC N terminal domain MASE_08975 PF06470 SMC proteins Flexible Hinge Domain MASE_08980 PF04354 ZipA, C-terminal FtsZ-binding domain MASE_08985 PF12826 Helix-hairpin-helix motif MASE_08985 PF00533 BRCA1 C Terminus (BRCT) domain MASE_08985 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MASE_08985 PF03120 NAD-dependent DNA ligase OB-fold domain MASE_08985 PF01653 NAD-dependent DNA ligase adenylation domain MASE_09000 PF00664 ABC transporter transmembrane region MASE_09000 PF00005 ABC transporter MASE_09005 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MASE_09010 PF03966 Trm112p-like protein MASE_09015 PF02348 Cytidylyltransferase MASE_09030 PF04055 Radical SAM superfamily MASE_09030 PF00919 Uncharacterized protein family UPF0004 MASE_09030 PF18693 TRAM domain MASE_09045 PF00899 ThiF family MASE_09050 PF13409 Glutathione S-transferase, N-terminal domain MASE_09055 PF02678 Pirin MASE_09055 PF05726 Pirin C-terminal cupin domain MASE_09065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MASE_09065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MASE_09065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MASE_09065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MASE_09080 PF00285 Citrate synthase, C-terminal domain MASE_09085 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MASE_09090 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MASE_09095 PF00890 FAD binding domain MASE_09095 PF02910 Fumarate reductase flavoprotein C-term MASE_09100 PF13085 2Fe-2S iron-sulfur cluster binding domain MASE_09105 PF16078 2-oxoglutarate dehydrogenase N-terminus MASE_09105 PF16870 2-oxoglutarate dehydrogenase C-terminal MASE_09105 PF02779 Transketolase, pyrimidine binding domain MASE_09105 PF00676 Dehydrogenase E1 component MASE_09110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MASE_09110 PF02817 e3 binding domain MASE_09110 PF00364 Biotin-requiring enzyme MASE_09115 PF00549 CoA-ligase MASE_09115 PF08442 ATP-grasp domain MASE_09120 PF00549 CoA-ligase MASE_09120 PF02629 CoA binding domain MASE_09130 PF04820 Tryptophan halogenase MASE_09140 PF03714 Bacterial pullanase-associated domain MASE_09140 PF17967 Pullulanase N2 domain MASE_09140 PF18494 Pullulanase Ins domain MASE_09140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MASE_09140 PF11852 Domain of unknown function (DUF3372) MASE_09145 PF01734 Patatin-like phospholipase MASE_09160 PF00128 Alpha amylase, catalytic domain MASE_09160 PF02903 Alpha amylase, N-terminal ig-like domain MASE_09160 PF16657 Maltogenic Amylase, C-terminal domain MASE_09165 PF09087 Cyclomaltodextrinase, N-terminal MASE_09165 PF00128 Alpha amylase, catalytic domain MASE_09165 PF10438 Cyclo-malto-dextrinase C-terminal domain MASE_09175 PF03423 Carbohydrate binding domain (family 25) MASE_09175 PF01373 Glycosyl hydrolase family 14 MASE_09175 PF00128 Alpha amylase, catalytic domain MASE_09180 PF00356 Bacterial regulatory proteins, lacI family MASE_09185 PF00749 tRNA synthetases class I (E and Q), catalytic domain MASE_09185 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MASE_09190 PF00106 short chain dehydrogenase MASE_09195 PF12262 Bacterial virulence factor lipase N-terminal MASE_09200 PF01804 Penicillin amidase MASE_09205 PF08496 Peptidase family S49 N-terminal MASE_09205 PF01343 Peptidase family S49 MASE_09220 PF01784 NIF3 (NGG1p interacting factor 3) MASE_09230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MASE_09230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MASE_09235 PF00255 Glutathione peroxidase MASE_09240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MASE_09240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MASE_09250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MASE_09250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_09250 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_09255 PF00378 Enoyl-CoA hydratase/isomerase MASE_09260 PF13847 Methyltransferase domain MASE_09265 PF00270 DEAD/DEAH box helicase MASE_09265 PF00271 Helicase conserved C-terminal domain MASE_09270 PF12794 Mechanosensitive ion channel inner membrane domain 1 MASE_09270 PF12795 Mechanosensitive ion channel porin domain MASE_09270 PF00924 Mechanosensitive ion channel MASE_09280 PF00141 Peroxidase MASE_09290 PF13426 PAS domain MASE_09290 PF00563 EAL domain MASE_09290 PF00990 Diguanylate cyclase, GGDEF domain MASE_09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_09305 PF03466 LysR substrate binding domain MASE_09315 PF01925 Sulfite exporter TauE/SafE MASE_09325 PF00072 Response regulator receiver domain MASE_09325 PF08769 Sporulation initiation factor Spo0A C terminal MASE_09335 PF00512 His Kinase A (phospho-acceptor) domain MASE_09335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_09345 PF03104 DNA polymerase family B, exonuclease domain MASE_09345 PF00136 DNA polymerase family B MASE_09355 PF13193 AMP-binding enzyme C-terminal domain MASE_09355 PF00501 AMP-binding enzyme MASE_09360 PF11893 Domain of unknown function (DUF3413) MASE_09360 PF00884 Sulfatase MASE_09365 PF07208 Protein of unknown function (DUF1414) MASE_09370 PF04245 37-kD nucleoid-associated bacterial protein MASE_09380 PF01551 Peptidase family M23 MASE_09380 PF10145 Phage-related minor tail protein MASE_09380 PF01464 Transglycosylase SLT domain MASE_09400 PF07694 5TMR of 5TMR-LYT MASE_09400 PF06580 Histidine kinase MASE_09405 PF00072 Response regulator receiver domain MASE_09405 PF04397 LytTr DNA-binding domain MASE_09410 PF00365 Phosphofructokinase MASE_09425 PF00497 Bacterial extracellular solute-binding proteins, family 3 MASE_09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_09425 PF01627 Hpt domain MASE_09425 PF00512 His Kinase A (phospho-acceptor) domain MASE_09425 PF00072 Response regulator receiver domain MASE_09425 PF00989 PAS fold MASE_09465 PF00270 DEAD/DEAH box helicase MASE_09465 PF00271 Helicase conserved C-terminal domain MASE_09470 PF01144 Coenzyme A transferase MASE_09475 PF01144 Coenzyme A transferase MASE_09480 PF03466 LysR substrate binding domain MASE_09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_09495 PF03466 LysR substrate binding domain MASE_09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_09500 PF03313 Serine dehydratase alpha chain MASE_09500 PF03315 Serine dehydratase beta chain MASE_09505 PF00293 NUDIX domain MASE_09510 PF00425 chorismate binding enzyme MASE_09510 PF04715 Anthranilate synthase component I, N terminal region MASE_09520 PF02646 RmuC family MASE_09525 PF02225 PA domain MASE_09525 PF00082 Subtilase family MASE_09525 PF13860 FlgD Ig-like domain MASE_09525 PF05922 Peptidase inhibitor I9 MASE_09530 PF00676 Dehydrogenase E1 component MASE_09535 PF02779 Transketolase, pyrimidine binding domain MASE_09535 PF02780 Transketolase, C-terminal domain MASE_09540 PF00364 Biotin-requiring enzyme MASE_09540 PF02817 e3 binding domain MASE_09540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MASE_09545 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MASE_09550 PF00069 Protein kinase domain MASE_09560 PF00132 Bacterial transferase hexapeptide (six repeats) MASE_09565 PF00266 Aminotransferase class-V MASE_09575 PF13185 GAF domain MASE_09585 PF04352 ProQ/FINO family MASE_09585 PF17516 ProQ C-terminal domain MASE_09590 PF17804 Tail specific protease N-terminal domain MASE_09590 PF00595 PDZ domain MASE_09590 PF11818 C-terminal domain of tail specific protease (DUF3340) MASE_09590 PF03572 Peptidase family S41 MASE_09595 PF00209 Sodium:neurotransmitter symporter family MASE_09605 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MASE_09605 PF01433 Peptidase family M1 domain MASE_09605 PF11940 Domain of unknown function (DUF3458) Ig-like fold MASE_09620 PF07044 Protein of unknown function (DUF1329) MASE_09635 PF05088 Bacterial NAD-glutamate dehydrogenase MASE_09640 PF01180 Dihydroorotate dehydrogenase MASE_09645 PF02926 THUMP domain MASE_09645 PF01170 Putative RNA methylase family UPF0020 MASE_09645 PF10672 S-adenosylmethionine-dependent methyltransferase MASE_09665 PF04957 Ribosome modulation factor MASE_09670 PF07977 FabA-like domain MASE_09680 PF03441 FAD binding domain of DNA photolyase MASE_09680 PF00875 DNA photolyase MASE_09685 PF00875 DNA photolyase MASE_09685 PF03441 FAD binding domain of DNA photolyase MASE_09690 PF00875 DNA photolyase MASE_09690 PF03441 FAD binding domain of DNA photolyase MASE_09695 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MASE_09710 PF04183 IucA / IucC family MASE_09710 PF06276 Ferric iron reductase FhuF-like transporter MASE_09715 PF04183 IucA / IucC family MASE_09715 PF06276 Ferric iron reductase FhuF-like transporter MASE_09720 PF13193 AMP-binding enzyme C-terminal domain MASE_09720 PF00501 AMP-binding enzyme MASE_09730 PF01261 Xylose isomerase-like TIM barrel MASE_09755 PF16750 Sensor domain of 2-component histidine kinase MASE_09755 PF00672 HAMP domain MASE_09755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_09755 PF00512 His Kinase A (phospho-acceptor) domain MASE_09760 PF00072 Response regulator receiver domain MASE_09760 PF00486 Transcriptional regulatory protein, C terminal MASE_09780 PF01219 Prokaryotic diacylglycerol kinase MASE_09785 PF00582 Universal stress protein family MASE_09795 PF01645 Conserved region in glutamate synthase MASE_09800 PF00999 Sodium/hydrogen exchanger family MASE_09805 PF00210 Ferritin-like domain MASE_09810 PF00210 Ferritin-like domain MASE_09820 PF00115 Cytochrome C and Quinol oxidase polypeptide I MASE_09835 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MASE_09835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MASE_09865 PF00027 Cyclic nucleotide-binding domain MASE_09865 PF13545 Crp-like helix-turn-helix domain MASE_09870 PF00582 Universal stress protein family MASE_09875 PF01171 PP-loop family MASE_09880 PF01734 Patatin-like phospholipase MASE_09900 PF01810 LysE type translocator MASE_09905 PF02146 Sir2 family MASE_09910 PF00581 Rhodanese-like domain MASE_09915 PF08534 Redoxin MASE_09925 PF01066 CDP-alcohol phosphatidyltransferase MASE_09930 PF02151 UvrB/uvrC motif MASE_09930 PF08459 UvrC Helix-hairpin-helix N-terminal MASE_09930 PF01541 GIY-YIG catalytic domain MASE_09935 PF00196 Bacterial regulatory proteins, luxR family MASE_09935 PF00072 Response regulator receiver domain MASE_09940 PF17954 Quercetinase C-terminal cupin domain MASE_09940 PF02678 Pirin MASE_09950 PF12867 DinB superfamily MASE_09950 PF03781 Sulfatase-modifying factor enzyme 1 MASE_09960 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MASE_09965 PF07681 DoxX MASE_09970 PF03466 LysR substrate binding domain MASE_09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_09980 PF01027 Inhibitor of apoptosis-promoting Bax1 MASE_09985 PF02635 DsrE/DsrF-like family MASE_10000 PF04358 DsrC like protein MASE_10030 PF00593 TonB dependent receptor MASE_10030 PF07715 TonB-dependent Receptor Plug Domain MASE_10035 PF02403 Seryl-tRNA synthetase N-terminal domain MASE_10035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MASE_10040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MASE_10045 PF16193 AAA C-terminal domain MASE_10045 PF00004 ATPase family associated with various cellular activities (AAA) MASE_10045 PF12002 MgsA AAA+ ATPase C terminal MASE_10050 PF03548 Outer membrane lipoprotein carrier protein LolA MASE_10055 PF17854 FtsK alpha domain MASE_10055 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MASE_10055 PF09397 Ftsk gamma domain MASE_10055 PF01580 FtsK/SpoIIIE family MASE_10060 PF01037 Lrp/AsnC ligand binding domain MASE_10065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MASE_10065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MASE_10070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MASE_10075 PF18073 Rubredoxin metal binding domain MASE_10090 PF00216 Bacterial DNA-binding protein MASE_10095 PF00575 S1 RNA binding domain MASE_10100 PF02224 Cytidylate kinase MASE_10105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MASE_10110 PF00266 Aminotransferase class-V MASE_10115 PF00521 DNA gyrase/topoisomerase IV, subunit A MASE_10115 PF03989 DNA gyrase C-terminal domain, beta-propeller MASE_10125 PF00317 Ribonucleotide reductase, all-alpha domain MASE_10125 PF03477 ATP cone domain MASE_10125 PF02867 Ribonucleotide reductase, barrel domain MASE_10130 PF00268 Ribonucleotide reductase, small chain MASE_10135 PF00111 2Fe-2S iron-sulfur cluster binding domain MASE_10140 PF00106 short chain dehydrogenase MASE_10155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MASE_10155 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_10160 PF00563 EAL domain MASE_10160 PF00990 Diguanylate cyclase, GGDEF domain MASE_10160 PF03707 Bacterial signalling protein N terminal repeat MASE_10165 PF00990 Diguanylate cyclase, GGDEF domain MASE_10165 PF00072 Response regulator receiver domain MASE_10170 PF00892 EamA-like transporter family MASE_10175 PF01259 SAICAR synthetase MASE_10180 PF06804 NlpB/DapX lipoprotein MASE_10185 PF00701 Dihydrodipicolinate synthetase family MASE_10195 PF00578 AhpC/TSA family MASE_10200 PF01594 AI-2E family transporter MASE_10205 PF01435 Peptidase family M48 MASE_10210 PF00578 AhpC/TSA family MASE_10215 PF03960 ArsC family MASE_10220 PF03358 NADPH-dependent FMN reductase MASE_10235 PF00308 Bacterial dnaA protein MASE_10245 PF02769 AIR synthase related protein, C-terminal domain MASE_10245 PF00586 AIR synthase related protein, N-terminal domain MASE_10250 PF00551 Formyl transferase MASE_10260 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_10260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MASE_10260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_10260 PF09317 Domain of unknown function (DUF1974) MASE_10270 PF00196 Bacterial regulatory proteins, luxR family MASE_10270 PF00072 Response regulator receiver domain MASE_10275 PF13649 Methyltransferase domain MASE_10280 PF08003 Protein of unknown function (DUF1698) MASE_10285 PF00485 Phosphoribulokinase / Uridine kinase family MASE_10300 PF00128 Alpha amylase, catalytic domain MASE_10305 PF13419 Haloacid dehalogenase-like hydrolase MASE_10310 PF03453 MoeA N-terminal region (domain I and II) MASE_10310 PF03454 MoeA C-terminal region (domain IV) MASE_10310 PF00994 Probable molybdopterin binding domain MASE_10315 PF01554 MatE MASE_10335 PF00291 Pyridoxal-phosphate dependent enzyme MASE_10385 PF13276 HTH-like domain MASE_10385 PF00665 Integrase core domain MASE_10385 PF13333 Integrase core domain MASE_10395 PF04134 Protein of unknown function, DUF393 MASE_10435 PF02567 Phenazine biosynthesis-like protein MASE_10445 PF00378 Enoyl-CoA hydratase/isomerase MASE_10460 PF00255 Glutathione peroxidase MASE_10465 PF02525 Flavodoxin-like fold MASE_10475 PF01053 Cys/Met metabolism PLP-dependent enzyme MASE_10490 PF00155 Aminotransferase class I and II MASE_10495 PF10459 Peptidase S46 MASE_10505 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MASE_10520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MASE_10520 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_10520 PF12806 Acetyl-CoA dehydrogenase C-terminal like MASE_10520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_10525 PF07883 Cupin domain MASE_10525 PF12833 Helix-turn-helix domain MASE_10530 PF07715 TonB-dependent Receptor Plug Domain MASE_10530 PF00593 TonB dependent receptor MASE_10540 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MASE_10540 PF00326 Prolyl oligopeptidase family MASE_10555 PF13533 Biotin-lipoyl like MASE_10565 PF01012 Electron transfer flavoprotein domain MASE_10565 PF00766 Electron transfer flavoprotein FAD-binding domain MASE_10570 PF01012 Electron transfer flavoprotein domain MASE_10580 PF00816 H-NS histone family MASE_10585 PF00561 alpha/beta hydrolase fold MASE_10595 PF00258 Flavodoxin MASE_10600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_10600 PF00672 HAMP domain MASE_10605 PF01475 Ferric uptake regulator family MASE_10610 PF01063 Amino-transferase class IV MASE_10615 PF02626 Carboxyltransferase domain, subdomain A and B MASE_10620 PF02682 Carboxyltransferase domain, subdomain C and D MASE_10625 PF03746 LamB/YcsF family MASE_10630 PF13509 S1 domain MASE_10630 PF17783 CvfB-like winged helix domain MASE_10635 PF02566 OsmC-like protein MASE_10640 PF13533 Biotin-lipoyl like MASE_10645 PF00873 AcrB/AcrD/AcrF family MASE_10690 PF13286 Phosphohydrolase-associated domain MASE_10690 PF01966 HD domain MASE_10695 PF00174 Oxidoreductase molybdopterin binding domain MASE_10700 PF01794 Ferric reductase like transmembrane component MASE_10715 PF02810 SEC-C motif MASE_10715 PF07517 SecA DEAD-like domain MASE_10715 PF01043 SecA preprotein cross-linking domain MASE_10715 PF07516 SecA Wing and Scaffold domain MASE_10720 PF00128 Alpha amylase, catalytic domain MASE_10725 PF08240 Alcohol dehydrogenase GroES-like domain MASE_10725 PF00107 Zinc-binding dehydrogenase MASE_10735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MASE_10735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_10735 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_10745 PF07715 TonB-dependent Receptor Plug Domain MASE_10745 PF00593 TonB dependent receptor MASE_10765 PF04055 Radical SAM superfamily MASE_10765 PF06969 HemN C-terminal domain MASE_10770 PF03459 TOBE domain MASE_10770 PF00005 ABC transporter MASE_10775 PF00528 Binding-protein-dependent transport system inner membrane component MASE_10785 PF02391 MoaE protein MASE_10790 PF02597 ThiS family MASE_10795 PF01967 MoaC family MASE_10800 PF00994 Probable molybdopterin binding domain MASE_10805 PF00899 ThiF family MASE_10845 PF00037 4Fe-4S binding domain MASE_10855 PF03435 Saccharopine dehydrogenase NADP binding domain MASE_10860 PF00155 Aminotransferase class I and II MASE_10875 PF08267 Cobalamin-independent synthase, N-terminal domain MASE_10875 PF01717 Cobalamin-independent synthase, Catalytic domain MASE_10880 PF00593 TonB dependent receptor MASE_10880 PF07715 TonB-dependent Receptor Plug Domain MASE_10890 PF00892 EamA-like transporter family MASE_10900 PF02245 Methylpurine-DNA glycosylase (MPG) MASE_10920 PF01810 LysE type translocator MASE_10925 PF00155 Aminotransferase class I and II MASE_10925 PF00392 Bacterial regulatory proteins, gntR family MASE_10935 PF13538 UvrD-like helicase C-terminal domain MASE_10940 PF13361 UvrD-like helicase C-terminal domain MASE_10940 PF12705 PD-(D/E)XK nuclease superfamily MASE_10940 PF00580 UvrD/REP helicase N-terminal domain MASE_10945 PF17946 RecC C-terminal domain MASE_10955 PF00501 AMP-binding enzyme MASE_10965 PF00563 EAL domain MASE_10965 PF00990 Diguanylate cyclase, GGDEF domain MASE_10965 PF03707 Bacterial signalling protein N terminal repeat MASE_10970 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MASE_10970 PF12706 Beta-lactamase superfamily domain MASE_10970 PF17770 Ribonuclease J C-terminal domain MASE_10985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_10985 PF03466 LysR substrate binding domain MASE_11005 PF01022 Bacterial regulatory protein, arsR family MASE_11015 PF03466 LysR substrate binding domain MASE_11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_11025 PF02954 Bacterial regulatory protein, Fis family MASE_11025 PF00072 Response regulator receiver domain MASE_11025 PF00158 Sigma-54 interaction domain MASE_11035 PF00360 Phytochrome region MASE_11035 PF00512 His Kinase A (phospho-acceptor) domain MASE_11035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_11035 PF08446 PAS fold MASE_11035 PF01590 GAF domain MASE_11040 PF00072 Response regulator receiver domain MASE_11045 PF00512 His Kinase A (phospho-acceptor) domain MASE_11045 PF09308 LuxQ, periplasmic MASE_11045 PF00072 Response regulator receiver domain MASE_11045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_11080 PF10677 Protein of unknown function (DUF2490) MASE_11085 PF07043 Protein of unknown function (DUF1328) MASE_11105 PF07023 Protein of unknown function (DUF1315) MASE_11115 PF01235 Sodium:alanine symporter family MASE_11120 PF00246 Zinc carboxypeptidase MASE_11120 PF18027 Cytosolic carboxypeptidase N-terminal domain MASE_11125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MASE_11125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MASE_11135 PF01641 SelR domain MASE_11140 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MASE_11140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MASE_11145 PF00128 Alpha amylase, catalytic domain MASE_11145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MASE_11150 PF00128 Alpha amylase, catalytic domain MASE_11150 PF02806 Alpha amylase, C-terminal all-beta domain MASE_11150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MASE_11155 PF02446 4-alpha-glucanotransferase MASE_11160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MASE_11160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MASE_11165 PF01263 Aldose 1-epimerase MASE_11170 PF01081 KDPG and KHG aldolase MASE_11175 PF02685 Glucokinase MASE_11180 PF00920 Dehydratase family MASE_11185 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MASE_11190 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MASE_11190 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MASE_11195 PF01418 Helix-turn-helix domain, rpiR family MASE_11195 PF01380 SIS domain MASE_11200 PF00224 Pyruvate kinase, barrel domain MASE_11200 PF02887 Pyruvate kinase, alpha/beta domain MASE_11205 PF01048 Phosphorylase superfamily MASE_11225 PF04972 BON domain MASE_11250 PF09347 Domain of unknown function (DUF1989) MASE_11275 PF04962 KduI/IolB family MASE_11280 PF03480 Bacterial extracellular solute-binding protein, family 7 MASE_11285 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component MASE_11290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MASE_11295 PF00356 Bacterial regulatory proteins, lacI family MASE_11300 PF08666 SAF domain MASE_11300 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus MASE_11305 PF02614 Glucuronate isomerase MASE_11310 PF01232 Mannitol dehydrogenase Rossmann domain MASE_11310 PF08125 Mannitol dehydrogenase C-terminal domain MASE_11315 PF01081 KDPG and KHG aldolase MASE_11320 PF00294 pfkB family carbohydrate kinase MASE_11325 PF13472 GDSL-like Lipase/Acylhydrolase family MASE_11340 PF07470 Glycosyl Hydrolase Family 88 MASE_11360 PF01095 Pectinesterase MASE_11365 PF01627 Hpt domain MASE_11365 PF00512 His Kinase A (phospho-acceptor) domain MASE_11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_11365 PF00672 HAMP domain MASE_11365 PF00072 Response regulator receiver domain MASE_11365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MASE_11380 PF04231 Endonuclease I MASE_11385 PF01433 Peptidase family M1 domain MASE_11385 PF11838 ERAP1-like C-terminal domain MASE_11390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_11390 PF02743 Cache domain MASE_11390 PF00672 HAMP domain MASE_11405 PF03466 LysR substrate binding domain MASE_11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_11410 PF01965 DJ-1/PfpI family MASE_11415 PF00465 Iron-containing alcohol dehydrogenase MASE_11420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MASE_11425 PF00360 Phytochrome region MASE_11425 PF01590 GAF domain MASE_11425 PF00563 EAL domain MASE_11425 PF00990 Diguanylate cyclase, GGDEF domain MASE_11435 PF00199 Catalase MASE_11435 PF06628 Catalase-related immune-responsive MASE_11440 PF11849 Domain of unknown function (DUF3369) MASE_11445 PF00512 His Kinase A (phospho-acceptor) domain MASE_11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_11445 PF00497 Bacterial extracellular solute-binding proteins, family 3 MASE_11450 PF12697 Alpha/beta hydrolase family MASE_11480 PF12833 Helix-turn-helix domain MASE_11485 PF00939 Sodium:sulfate symporter transmembrane region MASE_11490 PF00692 dUTPase MASE_11495 PF10609 NUBPL iron-transfer P-loop NTPase MASE_11500 PF08264 Anticodon-binding domain of tRNA MASE_11500 PF09334 tRNA synthetases class I (M) MASE_11500 PF01588 Putative tRNA binding domain MASE_11505 PF00924 Mechanosensitive ion channel MASE_11505 PF05552 Conserved TM helix MASE_11510 PF08241 Methyltransferase domain MASE_11515 PF16123 Hydroxyacylglutathione hydrolase C-terminus MASE_11515 PF00753 Metallo-beta-lactamase superfamily MASE_11545 PF04958 Arginine N-succinyltransferase beta subunit MASE_11550 PF09190 DALR domain MASE_11550 PF01406 tRNA synthetases class I (C) catalytic domain MASE_11555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MASE_11560 PF00149 Calcineurin-like phosphoesterase MASE_11570 PF15975 Flotillin MASE_11570 PF01145 SPFH domain / Band 7 family MASE_11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_11575 PF03466 LysR substrate binding domain MASE_11590 PF00128 Alpha amylase, catalytic domain MASE_11595 PF01638 HxlR-like helix-turn-helix MASE_11600 PF00107 Zinc-binding dehydrogenase MASE_11600 PF08240 Alcohol dehydrogenase GroES-like domain MASE_11605 PF03741 Integral membrane protein TerC family MASE_11610 PF00107 Zinc-binding dehydrogenase MASE_11610 PF08240 Alcohol dehydrogenase GroES-like domain MASE_11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_11615 PF03466 LysR substrate binding domain MASE_11640 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MASE_11650 PF00156 Phosphoribosyl transferase domain MASE_11655 PF02674 Colicin V production protein MASE_11660 PF05036 Sporulation related domain MASE_11665 PF08245 Mur ligase middle domain MASE_11665 PF02875 Mur ligase family, glutamate ligase domain MASE_11670 PF17848 Acetyl-coA carboxylase zinc finger domain MASE_11670 PF01039 Carboxyl transferase domain MASE_11675 PF01416 tRNA pseudouridine synthase MASE_11685 PF02774 Semialdehyde dehydrogenase, dimerisation domain MASE_11685 PF01118 Semialdehyde dehydrogenase, NAD binding domain MASE_11690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MASE_11690 PF11890 Domain of unknown function (DUF3410) MASE_11690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MASE_11695 PF00596 Class II Aldolase and Adducin N-terminal domain MASE_11710 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MASE_11715 PF02801 Beta-ketoacyl synthase, C-terminal domain MASE_11715 PF00109 Beta-ketoacyl synthase, N-terminal domain MASE_11735 PF01266 FAD dependent oxidoreductase MASE_11735 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MASE_11780 PF13411 MerR HTH family regulatory protein MASE_11795 PF00005 ABC transporter MASE_11805 PF02492 CobW/HypB/UreG, nucleotide-binding domain MASE_11805 PF07683 Cobalamin synthesis protein cobW C-terminal domain MASE_11810 PF02311 AraC-like ligand binding domain MASE_11810 PF12833 Helix-turn-helix domain MASE_11815 PF00857 Isochorismatase family MASE_11825 PF02667 Short chain fatty acid transporter MASE_11830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MASE_11830 PF00672 HAMP domain MASE_11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_11830 PF00512 His Kinase A (phospho-acceptor) domain MASE_11830 PF01627 Hpt domain MASE_11830 PF00072 Response regulator receiver domain MASE_11835 PF00675 Insulinase (Peptidase family M16) MASE_11835 PF05193 Peptidase M16 inactive domain MASE_11850 PF04315 Elongation factor P hydroxylase MASE_11875 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_11875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MASE_11880 PF00378 Enoyl-CoA hydratase/isomerase MASE_11885 PF00440 Bacterial regulatory proteins, tetR family MASE_11885 PF02909 Tetracyclin repressor-like, C-terminal domain MASE_11890 PF05199 GMC oxidoreductase MASE_11890 PF00732 GMC oxidoreductase MASE_11900 PF06974 Protein of unknown function (DUF1298) MASE_11900 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain MASE_11905 PF08361 MAATS-type transcriptional repressor, C-terminal region MASE_11905 PF00440 Bacterial regulatory proteins, tetR family MASE_11910 PF04286 Protein of unknown function (DUF445) MASE_11935 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MASE_11935 PF00326 Prolyl oligopeptidase family MASE_11940 PF00392 Bacterial regulatory proteins, gntR family MASE_11940 PF07840 FadR C-terminal domain MASE_11945 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MASE_11950 PF02600 Disulfide bond formation protein DsbB MASE_11955 PF13302 Acetyltransferase (GNAT) domain MASE_11960 PF03692 Putative zinc- or iron-chelating domain MASE_11965 PF01557 Fumarylacetoacetate (FAA) hydrolase family MASE_11975 PF05166 YcgL domain MASE_11980 PF00570 HRDC domain MASE_11980 PF01612 3'-5' exonuclease MASE_11985 PF13193 AMP-binding enzyme C-terminal domain MASE_11985 PF00501 AMP-binding enzyme MASE_11990 PF12697 Alpha/beta hydrolase family MASE_12005 PF00814 Glycoprotease family MASE_12010 PF06733 DEAD_2 MASE_12010 PF13307 Helicase C-terminal domain MASE_12050 PF00128 Alpha amylase, catalytic domain MASE_12085 PF13614 AAA domain MASE_12095 PF01634 ATP phosphoribosyltransferase MASE_12095 PF08029 HisG, C-terminal domain MASE_12100 PF00815 Histidinol dehydrogenase MASE_12105 PF00155 Aminotransferase class I and II MASE_12110 PF00475 Imidazoleglycerol-phosphate dehydratase MASE_12115 PF00117 Glutamine amidotransferase class-I MASE_12120 PF00977 Histidine biosynthesis protein MASE_12125 PF00977 Histidine biosynthesis protein MASE_12130 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MASE_12130 PF01502 Phosphoribosyl-AMP cyclohydrolase MASE_12145 PF01226 Formate/nitrite transporter MASE_12150 PF05193 Peptidase M16 inactive domain MASE_12150 PF00675 Insulinase (Peptidase family M16) MASE_12155 PF10502 Signal peptidase, peptidase S26 MASE_12160 PF07715 TonB-dependent Receptor Plug Domain MASE_12160 PF00593 TonB dependent receptor MASE_12175 PF05191 Adenylate kinase, active site lid MASE_12180 PF00183 Hsp90 protein MASE_12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_12185 PF13662 Toprim domain MASE_12185 PF02132 RecR protein MASE_12200 PF00970 Oxidoreductase FAD-binding domain MASE_12200 PF00175 Oxidoreductase NAD-binding domain MASE_12205 PF02575 YbaB/EbfC DNA-binding family MASE_12210 PF12170 DNA polymerase III tau subunit V interacting with alpha MASE_12210 PF12169 DNA polymerase III subunits gamma and tau domain III MASE_12210 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MASE_12215 PF00156 Phosphoribosyl transferase domain MASE_12225 PF05114 Protein of unknown function (DUF692) MASE_12235 PF00486 Transcriptional regulatory protein, C terminal MASE_12245 PF00360 Phytochrome region MASE_12245 PF01590 GAF domain MASE_12245 PF00990 Diguanylate cyclase, GGDEF domain MASE_12245 PF00563 EAL domain MASE_12255 PF01066 CDP-alcohol phosphatidyltransferase MASE_12275 PF09330 D-lactate dehydrogenase, membrane binding MASE_12275 PF01565 FAD binding domain MASE_12280 PF02652 L-lactate permease MASE_12285 PF03466 LysR substrate binding domain MASE_12285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_12300 PF10431 C-terminal, D2-small domain, of ClpB protein MASE_12300 PF02861 Clp amino terminal domain, pathogenicity island component MASE_12300 PF00004 ATPase family associated with various cellular activities (AAA) MASE_12300 PF07724 AAA domain (Cdc48 subfamily) MASE_12300 PF17871 AAA lid domain MASE_12315 PF00849 RNA pseudouridylate synthase MASE_12315 PF01479 S4 domain MASE_12320 PF13525 Outer membrane lipoprotein MASE_12330 PF04542 Sigma-70 region 2 MASE_12330 PF04545 Sigma-70, region 4 MASE_12345 PF00106 short chain dehydrogenase MASE_12365 PF13677 Membrane MotB of proton-channel complex MotA/MotB MASE_12365 PF00691 OmpA family MASE_12370 PF01618 MotA/TolQ/ExbB proton channel family MASE_12375 PF02609 Exonuclease VII small subunit MASE_12380 PF00348 Polyprenyl synthetase MASE_12395 PF04608 Phosphatidylglycerophosphatase A MASE_12400 PF02769 AIR synthase related protein, C-terminal domain MASE_12400 PF00586 AIR synthase related protein, N-terminal domain MASE_12405 PF01029 NusB family MASE_12410 PF00885 6,7-dimethyl-8-ribityllumazine synthase MASE_12415 PF00925 GTP cyclohydrolase II MASE_12415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MASE_12420 PF00677 Lumazine binding domain MASE_12425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MASE_12425 PF01872 RibD C-terminal domain MASE_12430 PF03477 ATP cone domain MASE_12435 PF00464 Serine hydroxymethyltransferase MASE_12445 PF00005 ABC transporter MASE_12445 PF12848 ABC transporter MASE_12455 PF18073 Rubredoxin metal binding domain MASE_12465 PF18429 Domain of unknown function (DUF5609) MASE_12475 PF01026 TatD related DNase MASE_12480 PF01243 Pyridoxamine 5'-phosphate oxidase MASE_12480 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MASE_12485 PF07650 KH domain MASE_12485 PF01926 50S ribosome-binding GTPase MASE_12490 PF00035 Double-stranded RNA binding motif MASE_12490 PF14622 Ribonuclease-III-like MASE_12495 PF10502 Signal peptidase, peptidase S26 MASE_12500 PF00679 Elongation factor G C-terminus MASE_12500 PF00009 Elongation factor Tu GTP binding domain MASE_12500 PF03144 Elongation factor Tu domain 2 MASE_12500 PF06421 GTP-binding protein LepA C-terminus MASE_12510 PF17188 MucB/RseB C-terminal domain MASE_12510 PF03888 MucB/RseB N-terminal domain MASE_12520 PF08281 Sigma-70, region 4 MASE_12520 PF04542 Sigma-70 region 2 MASE_12525 PF00890 FAD binding domain MASE_12525 PF02910 Fumarate reductase flavoprotein C-term MASE_12540 PF03937 Flavinator of succinate dehydrogenase MASE_12550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MASE_12555 PF00543 Nitrogen regulatory protein P-II MASE_12560 PF02540 NAD synthase MASE_12595 PF00114 Pilin (bacterial filament) MASE_12595 PF07963 Prokaryotic N-terminal methylation motif MASE_12620 PF02401 LytB protein MASE_12625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MASE_12630 PF01252 Signal peptidase (SPase) II MASE_12635 PF00133 tRNA synthetases class I (I, L, M and V) MASE_12635 PF08264 Anticodon-binding domain of tRNA MASE_12635 PF06827 Zinc finger found in FPG and IleRS MASE_12640 PF06574 FAD synthetase MASE_12640 PF01687 Riboflavin kinase MASE_12645 PF03023 Lipid II flippase MurJ MASE_12650 PF01649 Ribosomal protein S20 MASE_12655 PF00106 short chain dehydrogenase MASE_12665 PF00106 short chain dehydrogenase MASE_12670 PF01758 Sodium Bile acid symporter family MASE_12675 PF03466 LysR substrate binding domain MASE_12675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_12690 PF01546 Peptidase family M20/M25/M40 MASE_12690 PF07687 Peptidase dimerisation domain MASE_12700 PF13145 PPIC-type PPIASE domain MASE_12705 PF00216 Bacterial DNA-binding protein MASE_12710 PF00004 ATPase family associated with various cellular activities (AAA) MASE_12710 PF05362 Lon protease (S16) C-terminal proteolytic domain MASE_12710 PF02190 ATP-dependent protease La (LON) substrate-binding domain MASE_12715 PF07724 AAA domain (Cdc48 subfamily) MASE_12715 PF10431 C-terminal, D2-small domain, of ClpB protein MASE_12715 PF06689 ClpX C4-type zinc finger MASE_12720 PF00574 Clp protease MASE_12725 PF05697 Bacterial trigger factor protein (TF) MASE_12725 PF05698 Bacterial trigger factor protein (TF) C-terminus MASE_12725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MASE_12735 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MASE_12735 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MASE_12745 PF18389 TrmO C-terminal domain MASE_12745 PF01980 tRNA-methyltransferase O MASE_12750 PF03129 Anticodon binding domain MASE_12750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MASE_12755 PF00753 Metallo-beta-lactamase superfamily MASE_12755 PF12706 Beta-lactamase superfamily domain MASE_12760 PF02253 Phospholipase A1 MASE_12765 PF00850 Histone deacetylase domain MASE_12770 PF00672 HAMP domain MASE_12770 PF02743 Cache domain MASE_12770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_12775 PF00117 Glutamine amidotransferase class-I MASE_12775 PF00958 GMP synthase C terminal domain MASE_12775 PF02540 NAD synthase MASE_12780 PF00478 IMP dehydrogenase / GMP reductase domain MASE_12780 PF00571 CBS domain MASE_12785 PF02601 Exonuclease VII, large subunit MASE_12785 PF13742 OB-fold nucleic acid binding domain MASE_12805 PF01926 50S ribosome-binding GTPase MASE_12805 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MASE_12810 PF13360 PQQ-like domain MASE_12815 PF09976 Tetratricopeptide repeat-like domain MASE_12820 PF03129 Anticodon binding domain MASE_12820 PF13393 Histidyl-tRNA synthetase MASE_12825 PF04551 GcpE protein MASE_12830 PF13464 Domain of unknown function (DUF4115) MASE_12850 PF00334 Nucleoside diphosphate kinase MASE_12855 PF02657 Fe-S metabolism associated domain MASE_12860 PF01883 Iron-sulfur cluster assembly protein MASE_12865 PF01521 Iron-sulphur cluster biosynthesis MASE_12870 PF00266 Aminotransferase class-V MASE_12875 PF01458 Uncharacterized protein family (UPF0051) MASE_12880 PF00005 ABC transporter MASE_12885 PF01458 Uncharacterized protein family (UPF0051) MASE_12890 PF00266 Aminotransferase class-V MASE_12895 PF02082 Transcriptional regulator MASE_12905 PF00743 Flavin-binding monooxygenase-like MASE_12910 PF00132 Bacterial transferase hexapeptide (six repeats) MASE_12910 PF06426 Serine acetyltransferase, N-terminal MASE_12915 PF00588 SpoU rRNA Methylase family MASE_12920 PF00459 Inositol monophosphatase family MASE_12930 PF00072 Response regulator receiver domain MASE_12930 PF04397 LytTr DNA-binding domain MASE_12935 PF07549 SecD/SecF GG Motif MASE_12935 PF02355 Protein export membrane protein MASE_12940 PF02355 Protein export membrane protein MASE_12940 PF13721 SecD export protein N-terminal TM region MASE_12940 PF07549 SecD/SecF GG Motif MASE_12945 PF02699 Preprotein translocase subunit MASE_12950 PF01702 Queuine tRNA-ribosyltransferase MASE_12955 PF02547 Queuosine biosynthesis protein MASE_12970 PF04012 PspA/IM30 family MASE_12975 PF07885 Ion channel MASE_12990 PF06693 Protein of unknown function (DUF1190) MASE_12995 PF03738 Glutathionylspermidine synthase preATP-grasp MASE_13010 PF00005 ABC transporter MASE_13025 PF04960 Glutaminase MASE_13030 PF00245 Alkaline phosphatase MASE_13035 PF00072 Response regulator receiver domain MASE_13040 PF00463 Isocitrate lyase family MASE_13045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_13045 PF03466 LysR substrate binding domain MASE_13050 PF01274 Malate synthase MASE_13060 PF01370 NAD dependent epimerase/dehydratase family MASE_13085 PF17820 PDZ domain MASE_13085 PF13180 PDZ domain MASE_13105 PF00534 Glycosyl transferases group 1 MASE_13135 PF02350 UDP-N-acetylglucosamine 2-epimerase MASE_13155 PF01757 Acyltransferase family MASE_13165 PF00733 Asparagine synthase MASE_13165 PF13537 Glutamine amidotransferase domain MASE_13210 PF00733 Asparagine synthase MASE_13210 PF13537 Glutamine amidotransferase domain MASE_13225 PF01522 Polysaccharide deacetylase MASE_13230 PF02397 Bacterial sugar transferase MASE_13245 PF13614 AAA domain MASE_13265 PF01541 GIY-YIG catalytic domain MASE_13275 PF08335 GlnD PII-uridylyltransferase MASE_13275 PF03710 Glutamate-ammonia ligase adenylyltransferase MASE_13285 PF03279 Bacterial lipid A biosynthesis acyltransferase MASE_13300 PF09317 Domain of unknown function (DUF1974) MASE_13300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MASE_13300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_13300 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_13315 PF03707 Bacterial signalling protein N terminal repeat MASE_13315 PF00990 Diguanylate cyclase, GGDEF domain MASE_13315 PF00563 EAL domain MASE_13320 PF00265 Thymidine kinase MASE_13330 PF04820 Tryptophan halogenase MASE_13335 PF00356 Bacterial regulatory proteins, lacI family MASE_13365 PF10566 Glycoside hydrolase 97 MASE_13365 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation MASE_13365 PF14508 Glycosyl-hydrolase 97 N-terminal MASE_13370 PF01926 50S ribosome-binding GTPase MASE_13375 PF08032 RNA 2'-O ribose methyltransferase substrate binding MASE_13375 PF00588 SpoU rRNA Methylase family MASE_13420 PF00171 Aldehyde dehydrogenase family MASE_13425 PF05199 GMC oxidoreductase MASE_13425 PF00732 GMC oxidoreductase MASE_13440 PF05971 RNA methyltransferase MASE_13445 PF00376 MerR family regulatory protein MASE_13445 PF09278 MerR, DNA binding MASE_13480 PF18158 Adaptive response protein AidB N-terminal domain MASE_13480 PF02770 Acyl-CoA dehydrogenase, middle domain MASE_13480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MASE_13515 PF03965 Penicillinase repressor MASE_13535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MASE_13545 PF00111 2Fe-2S iron-sulfur cluster binding domain MASE_13545 PF01799 [2Fe-2S] binding domain MASE_13550 PF00941 FAD binding domain in molybdopterin dehydrogenase MASE_13550 PF03450 CO dehydrogenase flavoprotein C-terminal domain MASE_13555 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MASE_13555 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MASE_13560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MASE_13565 PF00528 Binding-protein-dependent transport system inner membrane component MASE_13575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MASE_13575 PF00005 ABC transporter MASE_13590 PF00561 alpha/beta hydrolase fold MASE_13590 PF00106 short chain dehydrogenase MASE_13595 PF01965 DJ-1/PfpI family MASE_13605 PF03631 Virulence factor BrkB MASE_13610 PF07690 Major Facilitator Superfamily MASE_13625 PF04397 LytTr DNA-binding domain MASE_13625 PF00072 Response regulator receiver domain MASE_13630 PF06719 AraC-type transcriptional regulator N-terminus MASE_13630 PF12833 Helix-turn-helix domain MASE_13635 PF12146 Serine aminopeptidase, S33 MASE_13640 PF12146 Serine aminopeptidase, S33 MASE_13655 PF00873 AcrB/AcrD/AcrF family MASE_13695 PF07152 YaeQ protein MASE_13725 PF07690 Major Facilitator Superfamily MASE_13730 PF01432 Peptidase family M3 MASE_13740 PF01258 Prokaryotic dksA/traR C4-type zinc finger MASE_13745 PF00696 Amino acid kinase family MASE_13745 PF00583 Acetyltransferase (GNAT) family MASE_13750 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MASE_13750 PF06827 Zinc finger found in FPG and IleRS MASE_13750 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MASE_13770 PF00270 DEAD/DEAH box helicase MASE_13770 PF00570 HRDC domain MASE_13770 PF09382 RQC domain MASE_13770 PF16124 RecQ zinc-binding MASE_13770 PF00271 Helicase conserved C-terminal domain MASE_13785 PF00672 HAMP domain MASE_13785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_13785 PF00512 His Kinase A (phospho-acceptor) domain MASE_13785 PF01627 Hpt domain MASE_13785 PF00072 Response regulator receiver domain MASE_13785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MASE_13795 PF01590 GAF domain MASE_13795 PF08446 PAS fold MASE_13795 PF00512 His Kinase A (phospho-acceptor) domain MASE_13795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_13795 PF00360 Phytochrome region MASE_13800 PF07995 Glucose / Sorbosone dehydrogenase MASE_13835 PF01597 Glycine cleavage H-protein MASE_13840 PF08669 Glycine cleavage T-protein C-terminal barrel domain MASE_13840 PF01571 Aminomethyltransferase folate-binding domain MASE_13845 PF07690 Major Facilitator Superfamily MASE_13850 PF01979 Amidohydrolase family MASE_13855 PF01380 SIS domain MASE_13860 PF01869 BadF/BadG/BcrA/BcrD ATPase family MASE_13865 PF02838 Glycosyl hydrolase family 20, domain 2 MASE_13865 PF00728 Glycosyl hydrolase family 20, catalytic domain MASE_13865 PF03173 Putative carbohydrate binding domain MASE_13875 PF00356 Bacterial regulatory proteins, lacI family MASE_13880 PF04820 Tryptophan halogenase MASE_13885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_13885 PF03466 LysR substrate binding domain MASE_13895 PF00557 Metallopeptidase family M24 MASE_13895 PF01321 Creatinase/Prolidase N-terminal domain MASE_13910 PF01494 FAD binding domain MASE_13915 PF01494 FAD binding domain MASE_13920 PF05195 Aminopeptidase P, N-terminal domain MASE_13920 PF00557 Metallopeptidase family M24 MASE_13925 PF03695 Uncharacterised protein family (UPF0149) MASE_13935 PF00294 pfkB family carbohydrate kinase MASE_13940 PF01156 Inosine-uridine preferring nucleoside hydrolase MASE_13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_13945 PF00512 His Kinase A (phospho-acceptor) domain MASE_13945 PF00989 PAS fold MASE_13945 PF13188 PAS domain MASE_13945 PF13426 PAS domain MASE_13955 PF01812 5-formyltetrahydrofolate cyclo-ligase family MASE_13960 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MASE_13965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MASE_13965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MASE_13965 PF01842 ACT domain MASE_13985 PF06945 Protein of unknown function (DUF1289) MASE_14005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MASE_14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_14010 PF03466 LysR substrate binding domain MASE_14015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MASE_14015 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_14020 PF00364 Biotin-requiring enzyme MASE_14020 PF02817 e3 binding domain MASE_14020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MASE_14025 PF17831 Pyruvate dehydrogenase E1 component middle domain MASE_14025 PF00456 Transketolase, thiamine diphosphate binding domain MASE_14030 PF00392 Bacterial regulatory proteins, gntR family MASE_14030 PF07729 FCD domain MASE_14040 PF01510 N-acetylmuramoyl-L-alanine amidase MASE_14050 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MASE_14050 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MASE_14055 PF07963 Prokaryotic N-terminal methylation motif MASE_14060 PF00482 Type II secretion system (T2SS), protein F MASE_14065 PF01478 Type IV leader peptidase family MASE_14065 PF06750 Bacterial Peptidase A24 N-terminal domain MASE_14070 PF01121 Dephospho-CoA kinase MASE_14075 PF07072 Cell division protein MASE_14085 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MASE_14090 PF00672 HAMP domain MASE_14090 PF02743 Cache domain MASE_14090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_14095 PF00196 Bacterial regulatory proteins, luxR family MASE_14095 PF00072 Response regulator receiver domain MASE_14100 PF13614 AAA domain MASE_14110 PF01584 CheW-like domain MASE_14110 PF01627 Hpt domain MASE_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_14110 PF02895 Signal transducing histidine kinase, homodimeric domain MASE_14110 PF07194 P2 response regulator binding domain MASE_14115 PF00072 Response regulator receiver domain MASE_14120 PF01739 CheR methyltransferase, SAM binding domain MASE_14120 PF03705 CheR methyltransferase, all-alpha domain MASE_14130 PF00072 Response regulator receiver domain MASE_14130 PF01339 CheB methylesterase MASE_14135 PF01584 CheW-like domain MASE_14140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_14140 PF02743 Cache domain MASE_14140 PF00672 HAMP domain MASE_14145 PF00293 NUDIX domain MASE_14150 PF07516 SecA Wing and Scaffold domain MASE_14150 PF01043 SecA preprotein cross-linking domain MASE_14150 PF02810 SEC-C motif MASE_14150 PF07517 SecA DEAD-like domain MASE_14155 PF01476 LysM domain MASE_14155 PF01551 Peptidase family M23 MASE_14155 PF08525 Opacity-associated protein A N-terminal motif MASE_14160 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MASE_14165 PF00091 Tubulin/FtsZ family, GTPase domain MASE_14165 PF12327 FtsZ family, C-terminal domain MASE_14170 PF02491 SHS2 domain inserted in FTSA MASE_14175 PF08478 POTRA domain, FtsQ-type MASE_14175 PF03799 Cell division protein FtsQ MASE_14180 PF07478 D-ala D-ala ligase C-terminus MASE_14180 PF01820 D-ala D-ala ligase N-terminus MASE_14185 PF02875 Mur ligase family, glutamate ligase domain MASE_14185 PF01225 Mur ligase family, catalytic domain MASE_14185 PF08245 Mur ligase middle domain MASE_14190 PF04101 Glycosyltransferase family 28 C-terminal domain MASE_14190 PF03033 Glycosyltransferase family 28 N-terminal domain MASE_14195 PF01098 Cell cycle protein MASE_14200 PF02875 Mur ligase family, glutamate ligase domain MASE_14200 PF08245 Mur ligase middle domain MASE_14205 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MASE_14205 PF00953 Glycosyl transferase family 4 MASE_14210 PF08245 Mur ligase middle domain MASE_14210 PF02875 Mur ligase family, glutamate ligase domain MASE_14210 PF01225 Mur ligase family, catalytic domain MASE_14215 PF08245 Mur ligase middle domain MASE_14215 PF01225 Mur ligase family, catalytic domain MASE_14215 PF02875 Mur ligase family, glutamate ligase domain MASE_14220 PF00905 Penicillin binding protein transpeptidase domain MASE_14220 PF03717 Penicillin-binding Protein dimerisation domain MASE_14225 PF04999 Cell division protein FtsL MASE_14230 PF01795 MraW methylase family MASE_14235 PF02381 MraZ protein, putative antitoxin-like MASE_14255 PF00873 AcrB/AcrD/AcrF family MASE_14260 PF00529 HlyD membrane-fusion protein of T1SS MASE_14260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MASE_14280 PF00462 Glutaredoxin MASE_14280 PF08534 Redoxin MASE_14285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MASE_14295 PF17158 Membrane-associated sensor, integral membrane domain MASE_14295 PF00990 Diguanylate cyclase, GGDEF domain MASE_14305 PF00158 Sigma-54 interaction domain MASE_14305 PF00072 Response regulator receiver domain MASE_14305 PF02954 Bacterial regulatory protein, Fis family MASE_14310 PF00072 Response regulator receiver domain MASE_14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_14310 PF09456 RcsC Alpha-Beta-Loop (ABL) MASE_14310 PF00512 His Kinase A (phospho-acceptor) domain MASE_14315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MASE_14315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MASE_14330 PF00462 Glutaredoxin MASE_14330 PF08534 Redoxin MASE_14335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MASE_14345 PF00990 Diguanylate cyclase, GGDEF domain MASE_14345 PF17158 Membrane-associated sensor, integral membrane domain MASE_14355 PF00072 Response regulator receiver domain MASE_14355 PF00158 Sigma-54 interaction domain MASE_14355 PF02954 Bacterial regulatory protein, Fis family MASE_14360 PF09456 RcsC Alpha-Beta-Loop (ABL) MASE_14360 PF00512 His Kinase A (phospho-acceptor) domain MASE_14360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_14360 PF00072 Response regulator receiver domain MASE_14365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MASE_14365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MASE_14380 PF05552 Conserved TM helix MASE_14380 PF00924 Mechanosensitive ion channel MASE_14385 PF04452 RNA methyltransferase MASE_14390 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MASE_14390 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MASE_14395 PF02622 Uncharacterized ACR, COG1678 MASE_14400 PF03652 Holliday junction resolvase MASE_14410 PF00437 Type II/IV secretion system protein MASE_14415 PF00437 Type II/IV secretion system protein MASE_14420 PF01168 Alanine racemase, N-terminal domain MASE_14425 PF14748 Pyrroline-5-carboxylate reductase dimerisation MASE_14425 PF03807 NADP oxidoreductase coenzyme F420-dependent MASE_14430 PF02325 YGGT family MASE_14440 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_14440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MASE_14460 PF00080 Copper/zinc superoxide dismutase (SODC) MASE_14465 PF02566 OsmC-like protein MASE_14470 PF01625 Peptide methionine sulfoxide reductase MASE_14480 PF03591 AzlC protein MASE_14490 PF07690 Major Facilitator Superfamily MASE_14495 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MASE_14500 PF03883 Peroxide stress protein YaaA MASE_14510 PF00923 Transaldolase/Fructose-6-phosphate aldolase MASE_14530 PF03167 Uracil DNA glycosylase superfamily MASE_14535 PF14821 Threonine synthase N terminus MASE_14535 PF00291 Pyridoxal-phosphate dependent enzyme MASE_14540 PF00288 GHMP kinases N terminal domain MASE_14540 PF08544 GHMP kinases C terminal MASE_14545 PF13840 ACT domain MASE_14545 PF01842 ACT domain MASE_14545 PF00696 Amino acid kinase family MASE_14545 PF03447 Homoserine dehydrogenase, NAD binding domain MASE_14545 PF00742 Homoserine dehydrogenase MASE_14550 PF17755 UvrA DNA-binding domain MASE_14555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_14555 PF03466 LysR substrate binding domain MASE_14560 PF00107 Zinc-binding dehydrogenase MASE_14560 PF08240 Alcohol dehydrogenase GroES-like domain MASE_14570 PF00196 Bacterial regulatory proteins, luxR family MASE_14570 PF00072 Response regulator receiver domain MASE_14575 PF07730 Histidine kinase MASE_14575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_14590 PF01022 Bacterial regulatory protein, arsR family MASE_14600 PF03358 NADPH-dependent FMN reductase MASE_14605 PF01758 Sodium Bile acid symporter family MASE_14610 PF01339 CheB methylesterase MASE_14610 PF00072 Response regulator receiver domain MASE_14615 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MASE_14620 PF00486 Transcriptional regulatory protein, C terminal MASE_14620 PF00072 Response regulator receiver domain MASE_14625 PF00672 HAMP domain MASE_14625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_14625 PF00512 His Kinase A (phospho-acceptor) domain MASE_14645 PF00291 Pyridoxal-phosphate dependent enzyme MASE_14655 PF00962 Adenosine/AMP deaminase MASE_14660 PF04116 Fatty acid hydroxylase superfamily MASE_14680 PF03435 Saccharopine dehydrogenase NADP binding domain MASE_14680 PF16653 Saccharopine dehydrogenase C-terminal domain MASE_14685 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MASE_14700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MASE_14705 PF04348 LppC putative lipoprotein MASE_14710 PF02021 Uncharacterised protein family UPF0102 MASE_14715 PF00534 Glycosyl transferases group 1 MASE_14720 PF13580 SIS domain MASE_14725 PF04972 BON domain MASE_14730 PF07690 Major Facilitator Superfamily MASE_14740 PF00893 Small Multidrug Resistance protein MASE_14745 PF07730 Histidine kinase MASE_14750 PF00072 Response regulator receiver domain MASE_14750 PF00196 Bacterial regulatory proteins, luxR family MASE_14765 PF07715 TonB-dependent Receptor Plug Domain MASE_14765 PF00593 TonB dependent receptor MASE_14780 PF00285 Citrate synthase, C-terminal domain MASE_14785 PF00694 Aconitase C-terminal domain MASE_14785 PF00330 Aconitase family (aconitate hydratase) MASE_14790 PF04303 PrpF protein MASE_14795 PF00990 Diguanylate cyclase, GGDEF domain MASE_14800 PF00474 Sodium:solute symporter family MASE_14815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_14815 PF00512 His Kinase A (phospho-acceptor) domain MASE_14815 PF18415 Histidine kinase receptor ArcB trans-membrane domain MASE_14815 PF01627 Hpt domain MASE_14815 PF00989 PAS fold MASE_14815 PF00072 Response regulator receiver domain MASE_14820 PF01510 N-acetylmuramoyl-L-alanine amidase MASE_14825 PF01493 GXGXG motif MASE_14825 PF01645 Conserved region in glutamate synthase MASE_14825 PF04898 Glutamate synthase central domain MASE_14825 PF00310 Glutamine amidotransferases class-II MASE_14830 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MASE_14830 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_14850 PF01048 Phosphorylase superfamily MASE_14855 PF03186 CobD/Cbib protein MASE_14860 PF01497 Periplasmic binding protein MASE_14880 PF01266 FAD dependent oxidoreductase MASE_14885 PF07237 Protein of unknown function (DUF1428) MASE_14910 PF10145 Phage-related minor tail protein MASE_14910 PF01551 Peptidase family M23 MASE_14910 PF01464 Transglycosylase SLT domain MASE_14915 PF03702 Anhydro-N-acetylmuramic acid kinase MASE_14920 PF03600 Citrate transporter MASE_14925 PF07690 Major Facilitator Superfamily MASE_14935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MASE_14945 PF01053 Cys/Met metabolism PLP-dependent enzyme MASE_14950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MASE_14955 PF00043 Glutathione S-transferase, C-terminal domain MASE_14955 PF13417 Glutathione S-transferase, N-terminal domain MASE_14960 PF01521 Iron-sulphur cluster biosynthesis MASE_14965 PF03976 Polyphosphate kinase 2 (PPK2) MASE_14970 PF03776 Septum formation topological specificity factor MinE MASE_14975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MASE_14980 PF05209 Septum formation inhibitor MinC, N-terminal domain MASE_14980 PF03775 Septum formation inhibitor MinC, C-terminal domain MASE_14985 PF10415 Fumarase C C-terminus MASE_14985 PF00206 Lyase MASE_14995 PF00127 Copper binding proteins, plastocyanin/azurin family MASE_15030 PF01566 Natural resistance-associated macrophage protein MASE_15035 PF00155 Aminotransferase class I and II MASE_15040 PF00072 Response regulator receiver domain MASE_15040 PF13188 PAS domain MASE_15040 PF08448 PAS fold MASE_15040 PF00512 His Kinase A (phospho-acceptor) domain MASE_15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_15050 PF03951 Glutamine synthetase, beta-Grasp domain MASE_15050 PF00120 Glutamine synthetase, catalytic domain MASE_15060 PF00989 PAS fold MASE_15060 PF00512 His Kinase A (phospho-acceptor) domain MASE_15060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_15065 PF02954 Bacterial regulatory protein, Fis family MASE_15065 PF00072 Response regulator receiver domain MASE_15065 PF00158 Sigma-54 interaction domain MASE_15070 PF00072 Response regulator receiver domain MASE_15075 PF01553 Acyltransferase MASE_15080 PF06877 Regulator of ribonuclease activity B MASE_15090 PF00990 Diguanylate cyclase, GGDEF domain MASE_15090 PF17158 Membrane-associated sensor, integral membrane domain MASE_15110 PF00672 HAMP domain MASE_15110 PF00512 His Kinase A (phospho-acceptor) domain MASE_15110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MASE_15110 PF00072 Response regulator receiver domain MASE_15110 PF01627 Hpt domain MASE_15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_15115 PF00133 tRNA synthetases class I (I, L, M and V) MASE_15115 PF08264 Anticodon-binding domain of tRNA MASE_15115 PF10458 Valyl tRNA synthetase tRNA binding arm MASE_15120 PF04364 DNA polymerase III chi subunit, HolC MASE_15125 PF00883 Cytosol aminopeptidase family, catalytic domain MASE_15125 PF02789 Cytosol aminopeptidase family, N-terminal domain MASE_15130 PF03739 Lipopolysaccharide export system permease LptF/LptG MASE_15135 PF03739 Lipopolysaccharide export system permease LptF/LptG MASE_15150 PF04545 Sigma-70, region 4 MASE_15150 PF04542 Sigma-70 region 2 MASE_15185 PF07728 AAA domain (dynein-related subfamily) MASE_15185 PF12102 Domain of unknown function (DUF3578) MASE_15185 PF07728 AAA domain (dynein-related subfamily) MASE_15185 PF12102 Domain of unknown function (DUF3578) MASE_15215 PF13361 UvrD-like helicase C-terminal domain MASE_15215 PF00580 UvrD/REP helicase N-terminal domain MASE_15230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MASE_15230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MASE_15235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_15235 PF00072 Response regulator receiver domain MASE_15235 PF00512 His Kinase A (phospho-acceptor) domain MASE_15235 PF01627 Hpt domain MASE_15235 PF00497 Bacterial extracellular solute-binding proteins, family 3 MASE_15240 PF01594 AI-2E family transporter MASE_15245 PF00593 TonB dependent receptor MASE_15245 PF07715 TonB-dependent Receptor Plug Domain MASE_15260 PF03150 Di-haem cytochrome c peroxidase MASE_15300 PF00230 Major intrinsic protein MASE_15305 PF00892 EamA-like transporter family MASE_15320 PF00593 TonB dependent receptor MASE_15320 PF07715 TonB-dependent Receptor Plug Domain MASE_15330 PF00593 TonB dependent receptor MASE_15330 PF07715 TonB-dependent Receptor Plug Domain MASE_15340 PF00474 Sodium:solute symporter family MASE_15355 PF03949 Malic enzyme, NAD binding domain MASE_15355 PF00390 Malic enzyme, N-terminal domain MASE_15365 PF01799 [2Fe-2S] binding domain MASE_15365 PF00111 2Fe-2S iron-sulfur cluster binding domain MASE_15370 PF03328 HpcH/HpaI aldolase/citrate lyase family MASE_15380 PF00356 Bacterial regulatory proteins, lacI family MASE_15410 PF02659 Putative manganese efflux pump MASE_15420 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MASE_15435 PF01321 Creatinase/Prolidase N-terminal domain MASE_15435 PF00557 Metallopeptidase family M24 MASE_15440 PF05221 S-adenosyl-L-homocysteine hydrolase MASE_15440 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MASE_15445 PF08448 PAS fold MASE_15445 PF00990 Diguanylate cyclase, GGDEF domain MASE_15450 PF03547 Membrane transport protein MASE_15455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MASE_15455 PF13360 PQQ-like domain MASE_15465 PF13360 PQQ-like domain MASE_15465 PF01011 PQQ enzyme repeat MASE_15485 PF00005 ABC transporter MASE_15500 PF00883 Cytosol aminopeptidase family, catalytic domain MASE_15500 PF02789 Cytosol aminopeptidase family, N-terminal domain MASE_15505 PF12706 Beta-lactamase superfamily domain MASE_15510 PF03070 TENA/THI-4/PQQC family MASE_15515 PF05402 Coenzyme PQQ synthesis protein D (PqqD) MASE_15520 PF13186 Iron-sulfur cluster-binding domain MASE_15520 PF04055 Radical SAM superfamily MASE_15545 PF00072 Response regulator receiver domain MASE_15545 PF00196 Bacterial regulatory proteins, luxR family MASE_15550 PF00512 His Kinase A (phospho-acceptor) domain MASE_15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_15560 PF04205 FMN-binding domain MASE_15560 PF12801 4Fe-4S binding domain MASE_15565 PF00171 Aldehyde dehydrogenase family MASE_15570 PF00196 Bacterial regulatory proteins, luxR family MASE_15570 PF00072 Response regulator receiver domain MASE_15575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_15575 PF07730 Histidine kinase MASE_15575 PF05231 MASE1 MASE_15580 PF13426 PAS domain MASE_15580 PF08447 PAS fold MASE_15580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_15590 PF00171 Aldehyde dehydrogenase family MASE_15595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MASE_15595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MASE_15610 PF02028 BCCT, betaine/carnitine/choline family transporter MASE_15615 PF03466 LysR substrate binding domain MASE_15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_15620 PF01070 FMN-dependent dehydrogenase MASE_15625 PF01565 FAD binding domain MASE_15625 PF09330 D-lactate dehydrogenase, membrane binding MASE_15630 PF00196 Bacterial regulatory proteins, luxR family MASE_15635 PF03783 Curli production assembly/transport component CsgG MASE_15660 PF00082 Subtilase family MASE_15665 PF00072 Response regulator receiver domain MASE_15665 PF00196 Bacterial regulatory proteins, luxR family MASE_15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_15670 PF07730 Histidine kinase MASE_15680 PF00270 DEAD/DEAH box helicase MASE_15680 PF00271 Helicase conserved C-terminal domain MASE_15685 PF12794 Mechanosensitive ion channel inner membrane domain 1 MASE_15685 PF12795 Mechanosensitive ion channel porin domain MASE_15685 PF00924 Mechanosensitive ion channel MASE_15695 PF00141 Peroxidase MASE_15705 PF13426 PAS domain MASE_15705 PF00990 Diguanylate cyclase, GGDEF domain MASE_15705 PF00563 EAL domain MASE_15720 PF03466 LysR substrate binding domain MASE_15720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_15730 PF01925 Sulfite exporter TauE/SafE MASE_15740 PF00072 Response regulator receiver domain MASE_15740 PF08769 Sporulation initiation factor Spo0A C terminal MASE_15750 PF00512 His Kinase A (phospho-acceptor) domain MASE_15750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_15760 PF03104 DNA polymerase family B, exonuclease domain MASE_15760 PF00136 DNA polymerase family B MASE_15770 PF13193 AMP-binding enzyme C-terminal domain MASE_15770 PF00501 AMP-binding enzyme MASE_15785 PF05958 tRNA (Uracil-5-)-methyltransferase MASE_15790 PF00440 Bacterial regulatory proteins, tetR family MASE_15800 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_15800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MASE_15810 PF03167 Uracil DNA glycosylase superfamily MASE_15815 PF00563 EAL domain MASE_15815 PF03707 Bacterial signalling protein N terminal repeat MASE_15815 PF00990 Diguanylate cyclase, GGDEF domain MASE_15825 PF01507 Phosphoadenosine phosphosulfate reductase family MASE_15830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MASE_15830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MASE_15835 PF00258 Flavodoxin MASE_15835 PF00667 FAD binding domain MASE_15835 PF00175 Oxidoreductase NAD-binding domain MASE_15855 PF04024 PspC domain MASE_15860 PF04012 PspA/IM30 family MASE_15870 PF01207 Dihydrouridine synthase (Dus) MASE_15880 PF00691 OmpA family MASE_15880 PF01389 OmpA-like transmembrane domain MASE_15885 PF02190 ATP-dependent protease La (LON) substrate-binding domain MASE_15885 PF00004 ATPase family associated with various cellular activities (AAA) MASE_15885 PF05362 Lon protease (S16) C-terminal proteolytic domain MASE_15890 PF03707 Bacterial signalling protein N terminal repeat MASE_15890 PF00990 Diguanylate cyclase, GGDEF domain MASE_15890 PF00563 EAL domain MASE_15895 PF00756 Putative esterase MASE_15900 PF01553 Acyltransferase MASE_15905 PF01553 Acyltransferase MASE_15910 PF00924 Mechanosensitive ion channel MASE_15925 PF01370 NAD dependent epimerase/dehydratase family MASE_15930 PF00209 Sodium:neurotransmitter symporter family MASE_15945 PF01625 Peptide methionine sulfoxide reductase MASE_15960 PF00258 Flavodoxin MASE_15970 PF02472 Biopolymer transport protein ExbD/TolR MASE_15980 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) MASE_15980 PF13181 Tetratricopeptide repeat MASE_15985 PF01270 Glycosyl hydrolases family 8 MASE_15995 PF03170 Bacterial cellulose synthase subunit MASE_15995 PF03552 Cellulose synthase MASE_15995 PF00535 Glycosyl transferase family 2 MASE_15995 PF07238 PilZ domain MASE_16010 PF05175 Methyltransferase small domain MASE_16015 PF13460 NAD(P)H-binding MASE_16020 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region MASE_16020 PF00326 Prolyl oligopeptidase family MASE_16025 PF08000 Bacterial PH domain MASE_16030 PF00990 Diguanylate cyclase, GGDEF domain MASE_16030 PF08448 PAS fold MASE_16030 PF00563 EAL domain MASE_16035 PF00291 Pyridoxal-phosphate dependent enzyme MASE_16040 PF07969 Amidohydrolase family MASE_16050 PF00753 Metallo-beta-lactamase superfamily MASE_16060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_16060 PF03466 LysR substrate binding domain MASE_16065 PF13230 Glutamine amidotransferases class-II MASE_16080 PF05360 yiaA/B two helix domain MASE_16100 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin MASE_16105 PF07715 TonB-dependent Receptor Plug Domain MASE_16105 PF00593 TonB dependent receptor MASE_16110 PF00171 Aldehyde dehydrogenase family MASE_16115 PF01613 Flavin reductase like domain MASE_16120 PF00881 Nitroreductase family MASE_16125 PF00561 alpha/beta hydrolase fold MASE_16130 PF01042 Endoribonuclease L-PSP MASE_16135 PF00857 Isochorismatase family MASE_16140 PF00296 Luciferase-like monooxygenase MASE_16145 PF08362 YcdC-like protein, C-terminal region MASE_16145 PF00440 Bacterial regulatory proteins, tetR family MASE_16160 PF09905 DNA-binding protein VF530 MASE_16165 PF02447 GntP family permease MASE_16175 PF00356 Bacterial regulatory proteins, lacI family MASE_16180 PF00753 Metallo-beta-lactamase superfamily MASE_16180 PF16123 Hydroxyacylglutathione hydrolase C-terminus MASE_16190 PF00817 impB/mucB/samB family MASE_16190 PF11799 impB/mucB/samB family C-terminal domain MASE_16190 PF11798 IMS family HHH motif MASE_16200 PF02424 ApbE family MASE_16205 PF00111 2Fe-2S iron-sulfur cluster binding domain MASE_16205 PF00970 Oxidoreductase FAD-binding domain MASE_16205 PF00175 Oxidoreductase NAD-binding domain MASE_16210 PF02508 Rnf-Nqr subunit, membrane protein MASE_16215 PF02508 Rnf-Nqr subunit, membrane protein MASE_16220 PF04205 FMN-binding domain MASE_16225 PF03116 NQR2, RnfD, RnfE family MASE_16230 PF11973 NQRA C-terminal domain MASE_16230 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MASE_16235 PF12241 Trans-2-enoyl-CoA reductase catalytic region MASE_16235 PF07055 Enoyl reductase FAD binding domain MASE_16235 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MASE_16240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MASE_16240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MASE_16245 PF00311 Phosphoenolpyruvate carboxylase MASE_16250 PF00056 lactate/malate dehydrogenase, NAD binding domain MASE_16250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MASE_16255 PF01316 Arginine repressor, DNA binding domain MASE_16255 PF02863 Arginine repressor, C-terminal domain MASE_16280 PF00485 Phosphoribulokinase / Uridine kinase family MASE_16285 PF07662 Na+ dependent nucleoside transporter C-terminus MASE_16285 PF07670 Nucleoside recognition MASE_16285 PF01773 Na+ dependent nucleoside transporter N-terminus MASE_16300 PF02469 Fasciclin domain MASE_16310 PF00990 Diguanylate cyclase, GGDEF domain MASE_16310 PF00072 Response regulator receiver domain MASE_16320 PF00571 CBS domain MASE_16340 PF18415 Histidine kinase receptor ArcB trans-membrane domain MASE_16340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_16340 PF00512 His Kinase A (phospho-acceptor) domain MASE_16350 PF08443 RimK-like ATP-grasp domain MASE_16350 PF18030 RimK PreATP-grasp domain MASE_16360 PF18030 RimK PreATP-grasp domain MASE_16360 PF08443 RimK-like ATP-grasp domain MASE_16370 PF00072 Response regulator receiver domain MASE_16370 PF00196 Bacterial regulatory proteins, luxR family MASE_16375 PF13193 AMP-binding enzyme C-terminal domain MASE_16375 PF00501 AMP-binding enzyme MASE_16375 PF16177 Acetyl-coenzyme A synthetase N-terminus MASE_16385 PF02690 Na+/Pi-cotransporter MASE_16390 PF00248 Aldo/keto reductase family MASE_16400 PF00082 Subtilase family MASE_16415 PF00069 Protein kinase domain MASE_16425 PF07730 Histidine kinase MASE_16425 PF17200 Single Cache domain 2 MASE_16430 PF00196 Bacterial regulatory proteins, luxR family MASE_16430 PF00072 Response regulator receiver domain MASE_16435 PF00082 Subtilase family MASE_16450 PF06628 Catalase-related immune-responsive MASE_16450 PF00199 Catalase MASE_16460 PF00009 Elongation factor Tu GTP binding domain MASE_16460 PF03144 Elongation factor Tu domain 2 MASE_16460 PF03143 Elongation factor Tu C-terminal domain MASE_16465 PF00009 Elongation factor Tu GTP binding domain MASE_16465 PF03143 Elongation factor Tu C-terminal domain MASE_16465 PF03144 Elongation factor Tu domain 2 MASE_16470 PF03144 Elongation factor Tu domain 2 MASE_16470 PF03143 Elongation factor Tu C-terminal domain MASE_16470 PF00009 Elongation factor Tu GTP binding domain MASE_16475 PF03309 Type III pantothenate kinase MASE_16480 PF08279 HTH domain MASE_16480 PF02237 Biotin protein ligase C terminal domain MASE_16480 PF03099 Biotin/lipoate A/B protein ligase family MASE_16485 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MASE_16485 PF01565 FAD binding domain MASE_16490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_16490 PF13426 PAS domain MASE_16490 PF08447 PAS fold MASE_16520 PF00664 ABC transporter transmembrane region MASE_16520 PF00005 ABC transporter MASE_16520 PF03412 Peptidase C39 family MASE_16525 PF03466 LysR substrate binding domain MASE_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_16540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MASE_16540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MASE_16540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MASE_16545 PF16363 GDP-mannose 4,6 dehydratase MASE_16550 PF04321 RmlD substrate binding domain MASE_16555 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MASE_16560 PF00483 Nucleotidyl transferase MASE_16570 PF00535 Glycosyl transferase family 2 MASE_16570 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 MASE_16585 PF00293 NUDIX domain MASE_16590 PF01370 NAD dependent epimerase/dehydratase family MASE_16610 PF00665 Integrase core domain MASE_16610 PF13276 HTH-like domain MASE_16610 PF13333 Integrase core domain MASE_16625 PF00082 Subtilase family MASE_16660 PF16363 GDP-mannose 4,6 dehydratase MASE_16665 PF00793 DAHP synthetase I family MASE_16670 PF02348 Cytidylyltransferase MASE_16680 PF00571 CBS domain MASE_16680 PF01380 SIS domain MASE_16685 PF05159 Capsule polysaccharide biosynthesis protein MASE_16730 PF00132 Bacterial transferase hexapeptide (six repeats) MASE_16750 PF00884 Sulfatase MASE_16780 PF00535 Glycosyl transferase family 2 MASE_16785 PF01050 Mannose-6-phosphate isomerase MASE_16785 PF00483 Nucleotidyl transferase MASE_16790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MASE_16790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MASE_16790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MASE_16790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MASE_16795 PF00700 Bacterial flagellin C-terminal helical region MASE_16795 PF07196 Flagellin hook IN motif MASE_16795 PF00669 Bacterial flagellin N-terminal helical region MASE_16800 PF01196 Ribosomal protein L17 MASE_16805 PF01000 RNA polymerase Rpb3/RpoA insert domain MASE_16805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MASE_16805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MASE_16810 PF00163 Ribosomal protein S4/S9 N-terminal domain MASE_16810 PF01479 S4 domain MASE_16815 PF00411 Ribosomal protein S11 MASE_16820 PF00416 Ribosomal protein S13/S18 MASE_16825 PF00444 Ribosomal protein L36 MASE_16840 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MASE_16845 PF00327 Ribosomal protein L30p/L7e MASE_16850 PF00333 Ribosomal protein S5, N-terminal domain MASE_16850 PF03719 Ribosomal protein S5, C-terminal domain MASE_16855 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MASE_16860 PF00347 Ribosomal protein L6 MASE_16865 PF00410 Ribosomal protein S8 MASE_16870 PF00253 Ribosomal protein S14p/S29e MASE_16875 PF00281 Ribosomal protein L5 MASE_16875 PF00673 ribosomal L5P family C-terminus MASE_16880 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MASE_16880 PF00467 KOW motif MASE_16885 PF00238 Ribosomal protein L14p/L23e MASE_16890 PF00512 His Kinase A (phospho-acceptor) domain MASE_16890 PF09308 LuxQ, periplasmic MASE_16890 PF00072 Response regulator receiver domain MASE_16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_16905 PF00588 SpoU rRNA Methylase family MASE_16905 PF08032 RNA 2'-O ribose methyltransferase substrate binding MASE_16910 PF00575 S1 RNA binding domain MASE_16910 PF00773 RNB domain MASE_16910 PF08206 Ribonuclease B OB domain MASE_16910 PF08461 Ribonuclease R winged-helix domain MASE_16910 PF17876 Cold shock domain MASE_16915 PF16655 PhoD-like phosphatase, N-terminal domain MASE_16915 PF09423 PhoD-like phosphatase MASE_16930 PF07715 TonB-dependent Receptor Plug Domain MASE_16930 PF00593 TonB dependent receptor MASE_16945 PF08238 Sel1 repeat MASE_16955 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MASE_16960 PF00175 Oxidoreductase NAD-binding domain MASE_16970 PF04389 Peptidase family M28 MASE_16980 PF00360 Phytochrome region MASE_16980 PF01590 GAF domain MASE_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_16980 PF00512 His Kinase A (phospho-acceptor) domain MASE_16980 PF08446 PAS fold MASE_16990 PF01654 Cytochrome bd terminal oxidase subunit I MASE_16995 PF02322 Cytochrome bd terminal oxidase subunit II MASE_17005 PF00672 HAMP domain MASE_17005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_17010 PF01037 Lrp/AsnC ligand binding domain MASE_17010 PF13404 AsnC-type helix-turn-helix domain MASE_17020 PF00313 'Cold-shock' DNA-binding domain MASE_17025 PF03109 ABC1 family MASE_17035 PF01209 ubiE/COQ5 methyltransferase family MASE_17045 PF01432 Peptidase family M3 MASE_17050 PF00072 Response regulator receiver domain MASE_17060 PF00512 His Kinase A (phospho-acceptor) domain MASE_17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_17060 PF08448 PAS fold MASE_17060 PF00072 Response regulator receiver domain MASE_17060 PF13188 PAS domain MASE_17065 PF00158 Sigma-54 interaction domain MASE_17065 PF02954 Bacterial regulatory protein, Fis family MASE_17065 PF00072 Response regulator receiver domain MASE_17070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MASE_17070 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_17075 PF01568 Molydopterin dinucleotide binding domain MASE_17075 PF00384 Molybdopterin oxidoreductase MASE_17075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MASE_17080 PF00593 TonB dependent receptor MASE_17080 PF07715 TonB-dependent Receptor Plug Domain MASE_17090 PF00326 Prolyl oligopeptidase family MASE_17090 PF07676 WD40-like Beta Propeller Repeat MASE_17145 PF03412 Peptidase C39 family MASE_17145 PF00664 ABC transporter transmembrane region MASE_17145 PF00005 ABC transporter MASE_17150 PF00196 Bacterial regulatory proteins, luxR family MASE_17150 PF00072 Response regulator receiver domain MASE_17175 PF00004 ATPase family associated with various cellular activities (AAA) MASE_17175 PF07724 AAA domain (Cdc48 subfamily) MASE_17180 PF00227 Proteasome subunit MASE_17185 PF00313 'Cold-shock' DNA-binding domain MASE_17200 PF05036 Sporulation related domain MASE_17205 PF18074 Primosomal protein N C-terminal domain MASE_17205 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MASE_17205 PF00271 Helicase conserved C-terminal domain MASE_17205 PF17764 3′ DNA-binding domain (3′BD) MASE_17205 PF00270 DEAD/DEAH box helicase MASE_17210 PF01197 Ribosomal protein L31 MASE_17225 PF00390 Malic enzyme, N-terminal domain MASE_17225 PF03949 Malic enzyme, NAD binding domain MASE_17230 PF01340 Met Apo-repressor, MetJ MASE_17235 PF02219 Methylenetetrahydrofolate reductase MASE_17240 PF03631 Virulence factor BrkB MASE_17255 PF00561 alpha/beta hydrolase fold MASE_17260 PF02580 D-Tyr-tRNA(Tyr) deacylase MASE_17265 PF00583 Acetyltransferase (GNAT) family MASE_17265 PF09500 Putative thioesterase (yiiD_Cterm) MASE_17270 PF00140 Sigma-70 factor, region 1.2 MASE_17270 PF04542 Sigma-70 region 2 MASE_17270 PF04545 Sigma-70, region 4 MASE_17275 PF00563 EAL domain MASE_17275 PF08668 HDOD domain MASE_17280 PF00563 EAL domain MASE_17280 PF08668 HDOD domain MASE_17285 PF18075 FtsX extracellular domain MASE_17290 PF00005 ABC transporter MASE_17295 PF02881 SRP54-type protein, helical bundle domain MASE_17295 PF00448 SRP54-type protein, GTPase domain MASE_17310 PF01914 MarC family integral membrane protein MASE_17320 PF00883 Cytosol aminopeptidase family, catalytic domain MASE_17320 PF12404 Peptidase MASE_17325 PF17746 SfsA N-terminal OB domain MASE_17325 PF03749 Sugar fermentation stimulation protein RE domain MASE_17330 PF01258 Prokaryotic dksA/traR C4-type zinc finger MASE_17335 PF00749 tRNA synthetases class I (E and Q), catalytic domain MASE_17340 PF12626 Polymerase A arginine-rich C-terminus MASE_17340 PF01743 Poly A polymerase head domain MASE_17340 PF12627 Probable RNA and SrmB- binding site of polymerase A MASE_17345 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MASE_17350 PF02548 Ketopantoate hydroxymethyltransferase MASE_17355 PF02569 Pantoate-beta-alanine ligase MASE_17360 PF00282 Pyridoxal-dependent decarboxylase conserved domain MASE_17375 PF01061 ABC-2 type transporter MASE_17380 PF00005 ABC transporter MASE_17385 PF00486 Transcriptional regulatory protein, C terminal MASE_17385 PF00072 Response regulator receiver domain MASE_17390 PF00512 His Kinase A (phospho-acceptor) domain MASE_17390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_17390 PF00672 HAMP domain MASE_17410 PF01595 Cyclin M transmembrane N-terminal domain MASE_17410 PF00571 CBS domain MASE_17415 PF03773 Predicted permease MASE_17420 PF13722 5TM C-terminal transporter carbon starvation CstA MASE_17420 PF02554 Carbon starvation protein CstA MASE_17425 PF00667 FAD binding domain MASE_17425 PF00175 Oxidoreductase NAD-binding domain MASE_17425 PF00258 Flavodoxin MASE_17465 PF02472 Biopolymer transport protein ExbD/TolR MASE_17475 PF01618 MotA/TolQ/ExbB proton channel family MASE_17485 PF07715 TonB-dependent Receptor Plug Domain MASE_17485 PF00593 TonB dependent receptor MASE_17490 PF01070 FMN-dependent dehydrogenase MASE_17495 PF18331 PKHD-type hydroxylase C-terminal domain MASE_17495 PF13640 2OG-Fe(II) oxygenase superfamily MASE_17500 PF00593 TonB dependent receptor MASE_17500 PF07715 TonB-dependent Receptor Plug Domain MASE_17505 PF07859 alpha/beta hydrolase fold MASE_17515 PF03144 Elongation factor Tu domain 2 MASE_17515 PF03143 Elongation factor Tu C-terminal domain MASE_17515 PF00009 Elongation factor Tu GTP binding domain MASE_17520 PF14492 Elongation Factor G, domain II MASE_17520 PF00679 Elongation factor G C-terminus MASE_17520 PF03144 Elongation factor Tu domain 2 MASE_17520 PF03764 Elongation factor G, domain IV MASE_17520 PF00009 Elongation factor Tu GTP binding domain MASE_17525 PF00177 Ribosomal protein S7p/S5e MASE_17530 PF00164 Ribosomal protein S12/S23 MASE_17535 PF00623 RNA polymerase Rpb1, domain 2 MASE_17535 PF04997 RNA polymerase Rpb1, domain 1 MASE_17535 PF04983 RNA polymerase Rpb1, domain 3 MASE_17535 PF04998 RNA polymerase Rpb1, domain 5 MASE_17535 PF05000 RNA polymerase Rpb1, domain 4 MASE_17540 PF04560 RNA polymerase Rpb2, domain 7 MASE_17540 PF00562 RNA polymerase Rpb2, domain 6 MASE_17540 PF10385 RNA polymerase beta subunit external 1 domain MASE_17540 PF04565 RNA polymerase Rpb2, domain 3 MASE_17540 PF04561 RNA polymerase Rpb2, domain 2 MASE_17540 PF04563 RNA polymerase beta subunit MASE_17550 PF00466 Ribosomal protein L10 MASE_17555 PF00687 Ribosomal protein L1p/L10e family MASE_17560 PF00298 Ribosomal protein L11, RNA binding domain MASE_17560 PF03946 Ribosomal protein L11, N-terminal domain MASE_17565 PF00467 KOW motif MASE_17565 PF02357 Transcription termination factor nusG MASE_17570 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MASE_17575 PF00005 ABC transporter MASE_17575 PF00664 ABC transporter transmembrane region MASE_17580 PF03737 Aldolase/RraA MASE_17585 PF05649 Peptidase family M13 MASE_17585 PF01431 Peptidase family M13 MASE_17600 PF03880 DbpA RNA binding domain MASE_17600 PF00271 Helicase conserved C-terminal domain MASE_17600 PF00270 DEAD/DEAH box helicase MASE_17610 PF01979 Amidohydrolase family MASE_17615 PF08212 Lipocalin-like domain MASE_17620 PF00248 Aldo/keto reductase family MASE_17625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MASE_17630 PF05552 Conserved TM helix MASE_17630 PF00924 Mechanosensitive ion channel MASE_17635 PF07690 Major Facilitator Superfamily MASE_17640 PF00128 Alpha amylase, catalytic domain MASE_17650 PF01227 GTP cyclohydrolase I MASE_17660 PF04371 Porphyromonas-type peptidyl-arginine deiminase MASE_17665 PF00795 Carbon-nitrogen hydrolase MASE_17675 PF08494 DEAD/H associated MASE_17675 PF00270 DEAD/DEAH box helicase MASE_17675 PF00271 Helicase conserved C-terminal domain MASE_17680 PF04235 Protein of unknown function (DUF418) MASE_17695 PF04675 DNA ligase N terminus MASE_17695 PF01068 ATP dependent DNA ligase domain MASE_17695 PF04679 ATP dependent DNA ligase C terminal region MASE_17700 PF01132 Elongation factor P (EF-P) OB domain MASE_17700 PF09285 Elongation factor P, C-terminal MASE_17700 PF08207 Elongation factor P (EF-P) KOW-like domain MASE_17705 PF00294 pfkB family carbohydrate kinase MASE_17725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_17730 PF02798 Glutathione S-transferase, N-terminal domain MASE_17730 PF00043 Glutathione S-transferase, C-terminal domain MASE_17735 PF02798 Glutathione S-transferase, N-terminal domain MASE_17745 PF00561 alpha/beta hydrolase fold MASE_17750 PF08241 Methyltransferase domain MASE_17760 PF00171 Aldehyde dehydrogenase family MASE_17765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MASE_17765 PF00205 Thiamine pyrophosphate enzyme, central domain MASE_17765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MASE_17780 PF00762 Ferrochelatase MASE_17785 PF03806 AbgT putative transporter family MASE_17790 PF01145 SPFH domain / Band 7 family MASE_17795 PF12221 Bacterial membrane protein N terminal MASE_17795 PF01145 SPFH domain / Band 7 family MASE_17800 PF13167 GTP-binding GTPase N-terminal MASE_17800 PF16360 GTP-binding GTPase Middle Region MASE_17800 PF01926 50S ribosome-binding GTPase MASE_17805 PF17209 Hfq protein MASE_17815 PF01119 DNA mismatch repair protein, C-terminal domain MASE_17815 PF08676 MutL C terminal dimerisation domain MASE_17820 PF01520 N-acetylmuramoyl-L-alanine amidase MASE_17825 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MASE_17830 PF03853 YjeF-related protein N-terminus MASE_17830 PF01256 Carbohydrate kinase MASE_17835 PF08331 Domain of unknown function (DUF1730) MASE_17845 PF01208 Uroporphyrinogen decarboxylase (URO-D) MASE_17850 PF09297 NADH pyrophosphatase zinc ribbon domain MASE_17850 PF00293 NUDIX domain MASE_17855 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MASE_17860 PF01475 Ferric uptake regulator family MASE_17870 PF01894 Uncharacterised protein family UPF0047 MASE_17875 PF00691 OmpA family MASE_17875 PF05736 OprF membrane domain MASE_17880 PF00772 DnaB-like helicase N terminal domain MASE_17880 PF03796 DnaB-like helicase C terminal domain MASE_17905 PF03475 3-alpha domain MASE_17905 PF03473 MOSC domain MASE_17915 PF00072 Response regulator receiver domain MASE_17915 PF00486 Transcriptional regulatory protein, C terminal MASE_17920 PF16750 Sensor domain of 2-component histidine kinase MASE_17920 PF00512 His Kinase A (phospho-acceptor) domain MASE_17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_17920 PF00672 HAMP domain MASE_17940 PF00873 AcrB/AcrD/AcrF family MASE_17945 PF01281 Ribosomal protein L9, N-terminal domain MASE_17945 PF03948 Ribosomal protein L9, C-terminal domain MASE_17950 PF01084 Ribosomal protein S18 MASE_17955 PF01250 Ribosomal protein S6 MASE_17965 PF00005 ABC transporter MASE_17975 PF08447 PAS fold MASE_17975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_17980 PF00497 Bacterial extracellular solute-binding proteins, family 3 MASE_17980 PF00512 His Kinase A (phospho-acceptor) domain MASE_17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_17985 PF00672 HAMP domain MASE_17985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MASE_17985 PF02743 Cache domain MASE_18000 PF03601 Conserved hypothetical protein 698 MASE_18005 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MASE_18010 PF00248 Aldo/keto reductase family MASE_18030 PF00474 Sodium:solute symporter family MASE_18035 PF07715 TonB-dependent Receptor Plug Domain MASE_18035 PF00593 TonB dependent receptor MASE_18040 PF01545 Cation efflux family MASE_18040 PF16916 Dimerisation domain of Zinc Transporter MASE_18045 PF00722 Glycosyl hydrolases family 16 MASE_18055 PF00990 Diguanylate cyclase, GGDEF domain MASE_18055 PF08448 PAS fold MASE_18065 PF01915 Glycosyl hydrolase family 3 C-terminal domain MASE_18065 PF00933 Glycosyl hydrolase family 3 N terminal domain MASE_18065 PF14310 Fibronectin type III-like domain MASE_18070 PF07690 Major Facilitator Superfamily MASE_18075 PF00232 Glycosyl hydrolase family 1 MASE_18080 PF00356 Bacterial regulatory proteins, lacI family MASE_18085 PF00083 Sugar (and other) transporter MASE_18090 PF00005 ABC transporter MASE_18090 PF00664 ABC transporter transmembrane region MASE_18095 PF00664 ABC transporter transmembrane region MASE_18095 PF00005 ABC transporter MASE_18100 PF08173 Membrane bound YbgT-like protein MASE_18105 PF02322 Cytochrome bd terminal oxidase subunit II MASE_18110 PF01654 Cytochrome bd terminal oxidase subunit I MASE_18120 PF02954 Bacterial regulatory protein, Fis family MASE_18120 PF00158 Sigma-54 interaction domain MASE_18120 PF00072 Response regulator receiver domain MASE_18145 PF13474 SnoaL-like domain MASE_18150 PF00857 Isochorismatase family MASE_18155 PF00034 Cytochrome c MASE_18160 PF01979 Amidohydrolase family MASE_18165 PF02678 Pirin MASE_18165 PF05726 Pirin C-terminal cupin domain MASE_18185 PF02649 Type I GTP cyclohydrolase folE2 MASE_18240 PF05532 CsbD-like MASE_18255 PF08281 Sigma-70, region 4 MASE_18255 PF04542 Sigma-70 region 2 MASE_18280 PF00472 RF-1 domain MASE_18285 PF00364 Biotin-requiring enzyme MASE_18285 PF00561 alpha/beta hydrolase fold MASE_18310 PF01292 Prokaryotic cytochrome b561 MASE_18315 PF04264 YceI-like domain MASE_18320 PF07992 Pyridine nucleotide-disulphide oxidoreductase MASE_18325 PF00593 TonB dependent receptor MASE_18325 PF07715 TonB-dependent Receptor Plug Domain MASE_18335 PF01048 Phosphorylase superfamily MASE_18340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_18340 PF03466 LysR substrate binding domain MASE_18345 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MASE_18350 PF00107 Zinc-binding dehydrogenase MASE_18350 PF16884 N-terminal domain of oxidoreductase MASE_18355 PF00360 Phytochrome region MASE_18355 PF00990 Diguanylate cyclase, GGDEF domain MASE_18355 PF01590 GAF domain MASE_18355 PF00563 EAL domain MASE_18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_18360 PF00512 His Kinase A (phospho-acceptor) domain MASE_18360 PF09308 LuxQ, periplasmic MASE_18360 PF00072 Response regulator receiver domain MASE_18370 PF00296 Luciferase-like monooxygenase MASE_18395 PF09278 MerR, DNA binding MASE_18395 PF00376 MerR family regulatory protein MASE_18400 PF02411 MerT mercuric transport protein MASE_18405 PF00403 Heavy-metal-associated domain MASE_18415 PF13411 MerR HTH family regulatory protein MASE_18430 PF01545 Cation efflux family MASE_18430 PF16916 Dimerisation domain of Zinc Transporter MASE_18445 PF00529 HlyD membrane-fusion protein of T1SS MASE_18445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MASE_18450 PF00873 AcrB/AcrD/AcrF family MASE_18455 PF07693 KAP family P-loop domain MASE_18480 PF12161 HsdM N-terminal domain MASE_18480 PF02384 N-6 DNA Methylase MASE_18490 PF12008 Type I restriction and modification enzyme - subunit R C terminal MASE_18490 PF18766 SWI2/SNF2 ATPase MASE_18490 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MASE_18520 PF11426 Tn7 transposition regulator TnsC MASE_18520 PF13401 AAA domain MASE_18525 PF00665 Integrase core domain MASE_18535 PF01380 SIS domain MASE_18540 PF08220 DeoR-like helix-turn-helix domain MASE_18540 PF00455 DeoR C terminal sensor domain MASE_18545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MASE_18545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MASE_18550 PF00132 Bacterial transferase hexapeptide (six repeats) MASE_18550 PF14602 Hexapeptide repeat of succinyl-transferase MASE_18550 PF12804 MobA-like NTP transferase domain MASE_18560 PF00892 EamA-like transporter family MASE_18565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MASE_18565 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MASE_18580 PF00144 Beta-lactamase MASE_18585 PF17810 Arginine decarboxylase helical bundle domain MASE_18585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MASE_18585 PF17944 Arginine decarboxylase C-terminal helical extension MASE_18595 PF02233 NAD(P) transhydrogenase beta subunit MASE_18600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MASE_18605 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MASE_18605 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MASE_18645 PF07715 TonB-dependent Receptor Plug Domain MASE_18645 PF00593 TonB dependent receptor MASE_18685 PF01040 UbiA prenyltransferase family MASE_18690 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MASE_18695 PF00510 Cytochrome c oxidase subunit III MASE_18700 PF00115 Cytochrome C and Quinol oxidase polypeptide I MASE_18705 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MASE_18705 PF06481 COX Aromatic Rich Motif MASE_18730 PF00544 Pectate lyase MASE_18735 PF00118 TCP-1/cpn60 chaperonin family MASE_18740 PF00166 Chaperonin 10 Kd subunit MASE_18750 PF03091 CutA1 divalent ion tolerance protein MASE_18755 PF02683 Cytochrome C biogenesis protein transmembrane region MASE_18755 PF11412 Disulphide bond corrector protein DsbC MASE_18760 PF01551 Peptidase family M23 MASE_18765 PF01220 Dehydroquinase class II MASE_18770 PF00364 Biotin-requiring enzyme MASE_18775 PF02785 Biotin carboxylase C-terminal domain MASE_18775 PF00289 Biotin carboxylase, N-terminal domain MASE_18775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MASE_18795 PF11490 DNA polymerase III polC-type N-terminus II MASE_18795 PF14579 Helix-hairpin-helix motif MASE_18795 PF02811 PHP domain MASE_18795 PF00929 Exonuclease MASE_18795 PF07733 Bacterial DNA polymerase III alpha NTPase domain MASE_18795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MASE_18815 PF01355 High potential iron-sulfur protein MASE_18820 PF01425 Amidase MASE_18835 PF01207 Dihydrouridine synthase (Dus) MASE_18840 PF02954 Bacterial regulatory protein, Fis family MASE_18845 PF01808 AICARFT/IMPCHase bienzyme MASE_18845 PF02142 MGS-like domain MASE_18855 PF02843 Phosphoribosylglycinamide synthetase, C domain MASE_18855 PF02844 Phosphoribosylglycinamide synthetase, N domain MASE_18855 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MASE_18870 PF00520 Ion transport protein MASE_18870 PF00027 Cyclic nucleotide-binding domain MASE_18875 PF00485 Phosphoribulokinase / Uridine kinase family MASE_18885 PF00486 Transcriptional regulatory protein, C terminal MASE_18885 PF00072 Response regulator receiver domain MASE_18890 PF00672 HAMP domain MASE_18890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_18890 PF00512 His Kinase A (phospho-acceptor) domain MASE_18900 PF13802 Galactose mutarotase-like MASE_18900 PF17137 Domain of unknown function (DUF5110) MASE_18900 PF01055 Glycosyl hydrolases family 31 MASE_18900 PF16338 Domain of unknown function (DUF4968) MASE_18910 PF01430 Hsp33 protein MASE_18915 PF01479 S4 domain MASE_18920 PF11356 Type II secretion system protein C MASE_18925 PF03958 Bacterial type II/III secretion system short domain MASE_18925 PF00263 Bacterial type II and III secretion system protein MASE_18930 PF00437 Type II/IV secretion system protein MASE_18935 PF00482 Type II secretion system (T2SS), protein F MASE_18940 PF07963 Prokaryotic N-terminal methylation motif MASE_18940 PF08334 Type II secretion system (T2SS), protein G MASE_18945 PF07963 Prokaryotic N-terminal methylation motif MASE_18945 PF12019 Type II transport protein GspH MASE_18950 PF07963 Prokaryotic N-terminal methylation motif MASE_18950 PF02501 Type II secretion system (T2SS), protein I MASE_18955 PF07963 Prokaryotic N-terminal methylation motif MASE_18955 PF11612 Type II secretion system (T2SS), protein J MASE_18965 PF12693 GspL periplasmic domain MASE_18965 PF05134 Type II secretion system (T2SS), protein L MASE_18970 PF04612 Type II secretion system (T2SS), protein M MASE_18985 PF12706 Beta-lactamase superfamily domain MASE_18990 PF00171 Aldehyde dehydrogenase family MASE_18995 PF01931 Protein of unknown function DUF84 MASE_19000 PF13419 Haloacid dehalogenase-like hydrolase MASE_19005 PF00293 NUDIX domain MASE_19010 PF00459 Inositol monophosphatase family MASE_19025 PF04349 Periplasmic glucan biosynthesis protein, MdoG MASE_19035 PF06794 Uncharacterised protein family (UPF0270) MASE_19040 PF00561 alpha/beta hydrolase fold MASE_19050 PF00005 ABC transporter MASE_19050 PF12848 ABC transporter MASE_19070 PF04102 SlyX MASE_19080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MASE_19080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MASE_19090 PF01272 Transcription elongation factor, GreA/GreB, C-term MASE_19090 PF03449 Transcription elongation factor, N-terminal MASE_19095 PF09371 Tex-like protein N-terminal domain MASE_19095 PF16921 Tex protein YqgF-like domain MASE_19095 PF17674 HHH domain MASE_19095 PF00575 S1 RNA binding domain MASE_19100 PF04820 Tryptophan halogenase MASE_19125 PF12833 Helix-turn-helix domain MASE_19135 PF04616 Glycosyl hydrolases family 43 MASE_19160 PF03422 Carbohydrate binding module (family 6) MASE_19160 PF00331 Glycosyl hydrolase family 10 MASE_19160 PF00553 Cellulose binding domain MASE_19165 PF00248 Aldo/keto reductase family MASE_19170 PF02780 Transketolase, C-terminal domain MASE_19170 PF00456 Transketolase, thiamine diphosphate binding domain MASE_19170 PF02779 Transketolase, pyrimidine binding domain MASE_19180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MASE_19180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MASE_19185 PF00923 Transaldolase/Fructose-6-phosphate aldolase MASE_19195 PF00933 Glycosyl hydrolase family 3 N terminal domain MASE_19195 PF14310 Fibronectin type III-like domain MASE_19195 PF01915 Glycosyl hydrolase family 3 C-terminal domain MASE_19200 PF00083 Sugar (and other) transporter MASE_19245 PF00561 alpha/beta hydrolase fold MASE_19250 PF00156 Phosphoribosyl transferase domain MASE_19260 PF01106 NifU-like domain MASE_19260 PF01521 Iron-sulphur cluster biosynthesis MASE_19270 PF01177 Asp/Glu/Hydantoin racemase MASE_19285 PF01554 MatE MASE_19300 PF02630 SCO1/SenC MASE_19305 PF01040 UbiA prenyltransferase family MASE_19310 PF02628 Cytochrome oxidase assembly protein MASE_19330 PF00510 Cytochrome c oxidase subunit III MASE_19335 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 MASE_19340 PF00115 Cytochrome C and Quinol oxidase polypeptide I MASE_19345 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MASE_19345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MASE_19350 PF01726 LexA DNA binding domain MASE_19350 PF00717 Peptidase S24-like MASE_19360 PF00990 Diguanylate cyclase, GGDEF domain MASE_19360 PF17151 Periplasmic sensor domain MASE_19365 PF01553 Acyltransferase MASE_19370 PF00291 Pyridoxal-phosphate dependent enzyme MASE_19370 PF00585 C-terminal regulatory domain of Threonine dehydratase MASE_19375 PF00920 Dehydratase family MASE_19380 PF03458 UPF0126 domain MASE_19385 PF01078 Magnesium chelatase, subunit ChlI MASE_19385 PF13335 Magnesium chelatase, subunit ChlI C-terminal MASE_19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MASE_19390 PF03466 LysR substrate binding domain MASE_19395 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MASE_19395 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MASE_19400 PF07690 Major Facilitator Superfamily MASE_19405 PF00326 Prolyl oligopeptidase family MASE_19410 PF13476 AAA domain MASE_19430 PF00535 Glycosyl transferase family 2 MASE_19435 PF00486 Transcriptional regulatory protein, C terminal MASE_19435 PF00072 Response regulator receiver domain MASE_19440 PF00512 His Kinase A (phospho-acceptor) domain MASE_19440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MASE_19440 PF00672 HAMP domain MASE_19445 PF00375 Sodium:dicarboxylate symporter family MASE_19450 PF00491 Arginase family MASE_19455 PF01979 Amidohydrolase family MASE_19460 PF07702 UTRA domain MASE_19460 PF00392 Bacterial regulatory proteins, gntR family MASE_19475 PF00221 Aromatic amino acid lyase MASE_19490 PF01869 BadF/BadG/BcrA/BcrD ATPase family MASE_19495 PF01979 Amidohydrolase family MASE_19505 PF00005 ABC transporter MASE_19505 PF12848 ABC transporter MASE_19535 PF01103 Surface antigen MASE_19535 PF07244 Surface antigen variable number repeat MASE_19535 PF17243 POTRA domain TamA domain 1 MASE_19540 PF04357 TamB, inner membrane protein subunit of TAM complex MASE_19565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MASE_19565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MASE_19575 PF01472 PUA domain MASE_19575 PF00696 Amino acid kinase family MASE_19595 PF03109 ABC1 family MASE_19620 PF01979 Amidohydrolase family MASE_19640 PF01206 Sulfurtransferase TusA MASE_19645 PF00156 Phosphoribosyl transferase domain MASE_19650 PF03725 3' exoribonuclease family, domain 2 MASE_19650 PF01138 3' exoribonuclease family, domain 1 MASE_19655 PF03755 YicC-like family, N-terminal region MASE_19655 PF08340 Domain of unknown function (DUF1732) MASE_19675 PF00232 Glycosyl hydrolase family 1 MASE_19685 PF00356 Bacterial regulatory proteins, lacI family MASE_19700 PF05736 OprF membrane domain MASE_19700 PF00691 OmpA family MASE_19705 PF01966 HD domain MASE_19720 PF02798 Glutathione S-transferase, N-terminal domain MASE_19720 PF00043 Glutathione S-transferase, C-terminal domain MASE_19730 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MASE_19730 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MASE_19735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MASE_19735 PF02874 ATP synthase alpha/beta family, beta-barrel domain MASE_19740 PF00231 ATP synthase MASE_19745 PF00306 ATP synthase alpha/beta chain, C terminal domain MASE_19745 PF02874 ATP synthase alpha/beta family, beta-barrel domain MASE_19745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MASE_19750 PF00213 ATP synthase delta (OSCP) subunit MASE_19755 PF00430 ATP synthase B/B' CF(0) MASE_19760 PF00137 ATP synthase subunit C MASE_19765 PF00119 ATP synthase A chain MASE_19775 PF02195 ParB-like nuclease domain MASE_19775 PF17762 HTH domain found in ParB protein MASE_19780 PF13614 AAA domain MASE_19785 PF02527 rRNA small subunit methyltransferase G MASE_19790 PF13932 GidA associated domain MASE_19790 PF01134 Glucose inhibited division protein A MASE_19805 PF00258 Flavodoxin MASE_19810 PF10396 GTP-binding protein TrmE N-terminus MASE_19810 PF12631 MnmE helical domain MASE_19810 PF01926 50S ribosome-binding GTPase MASE_19815 PF04461 Protein of unknown function (DUF520) MASE_19820 PF14849 YidC periplasmic domain MASE_19820 PF02096 60Kd inner membrane protein MASE_19825 PF01809 Putative membrane protein insertion efficiency factor MASE_19830 PF00825 Ribonuclease P MASE_19835 PF00468 Ribosomal protein L34