locus-tag class description EZ55_00001 PF00308 Bacterial dnaA protein EZ55_00001 PF08299 Bacterial dnaA protein helix-turn-helix EZ55_00001 PF11638 DnaA N-terminal domain EZ55_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain EZ55_00002 PF02767 DNA polymerase III beta subunit, central domain EZ55_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain EZ55_00003 PF02463 RecF/RecN/SMC N terminal domain EZ55_00004 PF01751 Toprim domain EZ55_00004 PF18053 DNA gyrase B subunit insert domain EZ55_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00004 PF00204 DNA gyrase B EZ55_00004 PF00986 DNA gyrase B subunit, carboxyl terminus EZ55_00009 PF02384 N-6 DNA Methylase EZ55_00010 PF12008 Type I restriction and modification enzyme - subunit R C terminal EZ55_00010 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EZ55_00010 PF18766 SWI2/SNF2 ATPase EZ55_00014 PF00665 Integrase core domain EZ55_00027 PF05746 DALR anticodon binding domain EZ55_00027 PF02092 Glycyl-tRNA synthetase beta subunit EZ55_00028 PF02091 Glycyl-tRNA synthetase alpha subunit EZ55_00029 PF03352 Methyladenine glycosylase EZ55_00031 PF04220 Der GTPase activator (YihI) EZ55_00033 PF00034 Cytochrome c EZ55_00034 PF01926 50S ribosome-binding GTPase EZ55_00035 PF01367 5'-3' exonuclease, C-terminal SAM fold EZ55_00035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EZ55_00035 PF00476 DNA polymerase family A EZ55_00035 PF01612 3'-5' exonuclease EZ55_00037 PF02386 Cation transport protein EZ55_00038 PF02080 TrkA-C domain EZ55_00038 PF02254 TrkA-N domain EZ55_00039 PF01029 NusB family EZ55_00039 PF01189 16S rRNA methyltransferase RsmB/F EZ55_00040 PF02911 Formyl transferase, C-terminal domain EZ55_00040 PF00551 Formyl transferase EZ55_00041 PF01327 Polypeptide deformylase EZ55_00043 PF02481 DNA recombination-mediator protein A EZ55_00043 PF17782 DprA winged helix domain EZ55_00044 PF04361 Protein of unknown function (DUF494) EZ55_00046 PF01300 Telomere recombination EZ55_00047 PF01218 Coproporphyrinogen III oxidase EZ55_00048 PF03922 OmpW family EZ55_00050 PF08501 Shikimate dehydrogenase substrate binding domain EZ55_00050 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EZ55_00050 PF01488 Shikimate / quinate 5-dehydrogenase EZ55_00052 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_00063 PF07733 Bacterial DNA polymerase III alpha NTPase domain EZ55_00063 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EZ55_00063 PF14579 Helix-hairpin-helix motif EZ55_00063 PF02811 PHP domain EZ55_00063 PF01336 OB-fold nucleic acid binding domain EZ55_00069 PF02225 PA domain EZ55_00069 PF04389 Peptidase family M28 EZ55_00072 PF00440 Bacterial regulatory proteins, tetR family EZ55_00073 PF02441 Flavoprotein EZ55_00073 PF04127 DNA / pantothenate metabolism flavoprotein EZ55_00074 PF04002 RadC-like JAB domain EZ55_00078 PF06082 Exopolysaccharide biosynthesis protein YbjH EZ55_00079 PF00830 Ribosomal L28 family EZ55_00080 PF00471 Ribosomal protein L33 EZ55_00082 PF06827 Zinc finger found in FPG and IleRS EZ55_00082 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EZ55_00082 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EZ55_00083 PF01467 Cytidylyltransferase-like EZ55_00087 PF00563 EAL domain EZ55_00087 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00087 PF03707 Bacterial signalling protein N terminal repeat EZ55_00088 PF00155 Aminotransferase class I and II EZ55_00089 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_00089 PF00107 Zinc-binding dehydrogenase EZ55_00090 PF00581 Rhodanese-like domain EZ55_00091 PF01694 Rhomboid family EZ55_00091 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease EZ55_00093 PF04345 Chorismate lyase EZ55_00094 PF01040 UbiA prenyltransferase family EZ55_00095 PF04380 Membrane fusogenic activity EZ55_00096 PF13361 UvrD-like helicase C-terminal domain EZ55_00096 PF00580 UvrD/REP helicase N-terminal domain EZ55_00097 PF00563 EAL domain EZ55_00097 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00097 PF03707 Bacterial signalling protein N terminal repeat EZ55_00098 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EZ55_00100 PF03553 Na+/H+ antiporter family EZ55_00101 PF02028 BCCT, betaine/carnitine/choline family transporter EZ55_00107 PF00593 TonB dependent receptor EZ55_00107 PF07715 TonB-dependent Receptor Plug Domain EZ55_00109 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_00109 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_00109 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_00110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_00110 PF03466 LysR substrate binding domain EZ55_00111 PF00753 Metallo-beta-lactamase superfamily EZ55_00112 PF04317 YcjX-like family, DUF463 EZ55_00116 PF06968 Biotin and Thiamin Synthesis associated domain EZ55_00116 PF04055 Radical SAM superfamily EZ55_00117 PF05690 Thiazole biosynthesis protein ThiG EZ55_00119 PF00899 ThiF family EZ55_00120 PF02581 Thiamine monophosphate synthase EZ55_00121 PF13667 ThiC-associated domain EZ55_00121 PF01964 Radical SAM ThiC family EZ55_00123 PF07219 HemY protein N-terminus EZ55_00123 PF07719 Tetratricopeptide repeat EZ55_00124 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EZ55_00125 PF02602 Uroporphyrinogen-III synthase HemD EZ55_00126 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EZ55_00126 PF03900 Porphobilinogen deaminase, C-terminal domain EZ55_00127 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00127 PF00072 Response regulator receiver domain EZ55_00129 PF00625 Guanylate kinase EZ55_00130 PF01192 RNA polymerase Rpb6 EZ55_00131 PF13291 ACT domain EZ55_00131 PF04607 Region found in RelA / SpoT proteins EZ55_00131 PF02824 TGS domain EZ55_00132 PF01042 Endoribonuclease L-PSP EZ55_00133 PF12105 SpoU, rRNA methylase, C-terminal EZ55_00133 PF00588 SpoU rRNA Methylase family EZ55_00134 PF00270 DEAD/DEAH box helicase EZ55_00134 PF00271 Helicase conserved C-terminal domain EZ55_00134 PF17191 RecG wedge domain EZ55_00135 PF04445 Putative SAM-dependent methyltransferase EZ55_00136 PF08534 Redoxin EZ55_00139 PF00528 Binding-protein-dependent transport system inner membrane component EZ55_00140 PF00005 ABC transporter EZ55_00140 PF08402 TOBE domain EZ55_00142 PF03922 OmpW family EZ55_00145 PF00563 EAL domain EZ55_00145 PF04940 Sensors of blue-light using FAD EZ55_00146 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00147 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_00147 PF03466 LysR substrate binding domain EZ55_00148 PF01810 LysE type translocator EZ55_00149 PF00893 Small Multidrug Resistance protein EZ55_00152 PF00529 HlyD membrane-fusion protein of T1SS EZ55_00152 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_00153 PF00873 AcrB/AcrD/AcrF family EZ55_00155 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EZ55_00155 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EZ55_00156 PF00850 Histone deacetylase domain EZ55_00157 PF00462 Glutaredoxin EZ55_00159 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00159 PF00672 HAMP domain EZ55_00159 PF12729 Four helix bundle sensory module for signal transduction EZ55_00161 PF11737 Protein of unknown function (DUF3300) EZ55_00162 PF00925 GTP cyclohydrolase II EZ55_00163 PF00563 EAL domain EZ55_00163 PF08448 PAS fold EZ55_00163 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00166 PF16124 RecQ zinc-binding EZ55_00166 PF00570 HRDC domain EZ55_00166 PF00271 Helicase conserved C-terminal domain EZ55_00166 PF00270 DEAD/DEAH box helicase EZ55_00166 PF09382 RQC domain EZ55_00167 PF03061 Thioesterase superfamily EZ55_00168 PF03448 MgtE intracellular N domain EZ55_00168 PF01769 Divalent cation transporter EZ55_00168 PF00571 CBS domain EZ55_00169 PF00892 EamA-like transporter family EZ55_00170 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00170 PF08448 PAS fold EZ55_00171 PF00580 UvrD/REP helicase N-terminal domain EZ55_00171 PF13361 UvrD-like helicase C-terminal domain EZ55_00172 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_00172 PF06426 Serine acetyltransferase, N-terminal EZ55_00173 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00174 PF13419 Haloacid dehalogenase-like hydrolase EZ55_00175 PF00589 Phage integrase family EZ55_00175 PF02899 Phage integrase, N-terminal SAM-like domain EZ55_00177 PF01678 Diaminopimelate epimerase EZ55_00178 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EZ55_00178 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EZ55_00181 PF01569 PAP2 superfamily EZ55_00182 PF03737 Aldolase/RraA EZ55_00185 PF02441 Flavoprotein EZ55_00186 PF08245 Mur ligase middle domain EZ55_00186 PF02875 Mur ligase family, glutamate ligase domain EZ55_00186 PF01225 Mur ligase family, catalytic domain EZ55_00187 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EZ55_00188 PF00719 Inorganic pyrophosphatase EZ55_00197 PF17755 UvrA DNA-binding domain EZ55_00197 PF00005 ABC transporter EZ55_00197 PF17760 UvrA interaction domain EZ55_00198 PF07690 Major Facilitator Superfamily EZ55_00199 PF13419 Haloacid dehalogenase-like hydrolase EZ55_00202 PF00356 Bacterial regulatory proteins, lacI family EZ55_00203 PF01263 Aldose 1-epimerase EZ55_00204 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EZ55_00204 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EZ55_00205 PF10509 Galactokinase galactose-binding signature EZ55_00205 PF08544 GHMP kinases C terminal EZ55_00205 PF00288 GHMP kinases N terminal domain EZ55_00206 PF00474 Sodium:solute symporter family EZ55_00207 PF00436 Single-strand binding protein family EZ55_00210 PF16874 Glycosyl hydrolase family 36 C-terminal domain EZ55_00210 PF16875 Glycosyl hydrolase family 36 N-terminal domain EZ55_00211 PF00474 Sodium:solute symporter family EZ55_00213 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EZ55_00213 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EZ55_00214 PF08220 DeoR-like helix-turn-helix domain EZ55_00214 PF00455 DeoR C terminal sensor domain EZ55_00215 PF01266 FAD dependent oxidoreductase EZ55_00215 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EZ55_00222 PF03958 Bacterial type II/III secretion system short domain EZ55_00222 PF00263 Bacterial type II and III secretion system protein EZ55_00223 PF13401 AAA domain EZ55_00223 PF01471 Putative peptidoglycan binding domain EZ55_00225 PF00437 Type II/IV secretion system protein EZ55_00225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EZ55_00226 PF00482 Type II secretion system (T2SS), protein F EZ55_00228 PF07963 Prokaryotic N-terminal methylation motif EZ55_00229 PF00872 Transposase, Mutator family EZ55_00230 PF07963 Prokaryotic N-terminal methylation motif EZ55_00237 PF04085 rod shape-determining protein MreC EZ55_00238 PF04093 rod shape-determining protein MreD EZ55_00239 PF02545 Maf-like protein EZ55_00240 PF00575 S1 RNA binding domain EZ55_00240 PF10150 Ribonuclease E/G family EZ55_00242 PF00795 Carbon-nitrogen hydrolase EZ55_00243 PF01523 Putative modulator of DNA gyrase EZ55_00245 PF04751 Protein of unknown function (DUF615) EZ55_00246 PF01523 Putative modulator of DNA gyrase EZ55_00248 PF16353 Domain of unknown function(DUF4981) EZ55_00248 PF02837 Glycosyl hydrolases family 2, sugar binding domain EZ55_00248 PF00703 Glycosyl hydrolases family 2 EZ55_00248 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EZ55_00248 PF02929 Beta galactosidase small chain EZ55_00249 PF00486 Transcriptional regulatory protein, C terminal EZ55_00249 PF00072 Response regulator receiver domain EZ55_00250 PF00497 Bacterial extracellular solute-binding proteins, family 3 EZ55_00250 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00251 PF00534 Glycosyl transferases group 1 EZ55_00251 PF08323 Starch synthase catalytic domain EZ55_00252 PF05175 Methyltransferase small domain EZ55_00252 PF08468 Methyltransferase small domain N-terminal EZ55_00253 PF02390 Putative methyltransferase EZ55_00255 PF00730 HhH-GPD superfamily base excision DNA repair protein EZ55_00255 PF00633 Helix-hairpin-helix motif EZ55_00255 PF14815 NUDIX domain EZ55_00256 PF04362 Bacterial Fe(2+) trafficking EZ55_00268 PF01131 DNA topoisomerase EZ55_00268 PF01751 Toprim domain EZ55_00268 PF01396 Topoisomerase DNA binding C4 zinc finger EZ55_00274 PF00589 Phage integrase family EZ55_00274 PF02899 Phage integrase, N-terminal SAM-like domain EZ55_00284 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_00284 PF00529 HlyD membrane-fusion protein of T1SS EZ55_00285 PF00873 AcrB/AcrD/AcrF family EZ55_00286 PF16916 Dimerisation domain of Zinc Transporter EZ55_00286 PF01545 Cation efflux family EZ55_00288 PF01219 Prokaryotic diacylglycerol kinase EZ55_00289 PF08019 Phosphoethanolamine transferase EptA/EptB EZ55_00289 PF00884 Sulfatase EZ55_00290 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EZ55_00292 PF00535 Glycosyl transferase family 2 EZ55_00294 PF00072 Response regulator receiver domain EZ55_00294 PF00486 Transcriptional regulatory protein, C terminal EZ55_00295 PF00672 HAMP domain EZ55_00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00295 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00299 PF00873 AcrB/AcrD/AcrF family EZ55_00302 PF01435 Peptidase family M48 EZ55_00306 PF00672 HAMP domain EZ55_00306 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00306 PF17200 Single Cache domain 2 EZ55_00307 PF00072 Response regulator receiver domain EZ55_00308 PF01627 Hpt domain EZ55_00308 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00308 PF09078 CheY binding EZ55_00308 PF02895 Signal transducing histidine kinase, homodimeric domain EZ55_00308 PF01584 CheW-like domain EZ55_00309 PF01584 CheW-like domain EZ55_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00310 PF08447 PAS fold EZ55_00310 PF13426 PAS domain EZ55_00311 PF03705 CheR methyltransferase, all-alpha domain EZ55_00311 PF01739 CheR methyltransferase, SAM binding domain EZ55_00312 PF03975 CheD chemotactic sensory transduction EZ55_00313 PF01339 CheB methylesterase EZ55_00313 PF00072 Response regulator receiver domain EZ55_00314 PF17200 Single Cache domain 2 EZ55_00314 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00314 PF00672 HAMP domain EZ55_00315 PF00072 Response regulator receiver domain EZ55_00316 PF02895 Signal transducing histidine kinase, homodimeric domain EZ55_00316 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00316 PF09078 CheY binding EZ55_00316 PF01627 Hpt domain EZ55_00316 PF01584 CheW-like domain EZ55_00317 PF01584 CheW-like domain EZ55_00318 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00318 PF08447 PAS fold EZ55_00318 PF13426 PAS domain EZ55_00319 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00319 PF08447 PAS fold EZ55_00319 PF13426 PAS domain EZ55_00320 PF03705 CheR methyltransferase, all-alpha domain EZ55_00320 PF01739 CheR methyltransferase, SAM binding domain EZ55_00321 PF03975 CheD chemotactic sensory transduction EZ55_00322 PF01339 CheB methylesterase EZ55_00322 PF00072 Response regulator receiver domain EZ55_00324 PF13419 Haloacid dehalogenase-like hydrolase EZ55_00325 PF13006 Insertion element 4 transposase N-terminal EZ55_00325 PF01609 Transposase DDE domain EZ55_00327 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EZ55_00327 PF00356 Bacterial regulatory proteins, lacI family EZ55_00329 PF01204 Trehalase EZ55_00332 PF13419 Haloacid dehalogenase-like hydrolase EZ55_00334 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00334 PF09308 LuxQ, periplasmic EZ55_00334 PF00072 Response regulator receiver domain EZ55_00334 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00337 PF00356 Bacterial regulatory proteins, lacI family EZ55_00338 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EZ55_00338 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EZ55_00340 PF03825 Nucleoside H+ symporter EZ55_00342 PF05199 GMC oxidoreductase EZ55_00342 PF00732 GMC oxidoreductase EZ55_00345 PF00465 Iron-containing alcohol dehydrogenase EZ55_00351 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_00352 PF01063 Amino-transferase class IV EZ55_00353 PF00300 Histidine phosphatase superfamily (branch 1) EZ55_00355 PF00330 Aconitase family (aconitate hydratase) EZ55_00355 PF00694 Aconitase C-terminal domain EZ55_00357 PF00437 Type II/IV secretion system protein EZ55_00357 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EZ55_00358 PF00338 Ribosomal protein S10p/S20e EZ55_00359 PF00297 Ribosomal protein L3 EZ55_00360 PF00573 Ribosomal protein L4/L1 family EZ55_00361 PF00276 Ribosomal protein L23 EZ55_00362 PF00181 Ribosomal Proteins L2, RNA binding domain EZ55_00362 PF03947 Ribosomal Proteins L2, C-terminal domain EZ55_00363 PF00203 Ribosomal protein S19 EZ55_00364 PF00237 Ribosomal protein L22p/L17e EZ55_00365 PF07650 KH domain EZ55_00365 PF00189 Ribosomal protein S3, C-terminal domain EZ55_00366 PF00252 Ribosomal protein L16p/L10e EZ55_00367 PF00831 Ribosomal L29 protein EZ55_00368 PF00366 Ribosomal protein S17 EZ55_00370 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EZ55_00370 PF00534 Glycosyl transferases group 1 EZ55_00374 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00374 PF00672 HAMP domain EZ55_00374 PF02743 Cache domain EZ55_00375 PF01432 Peptidase family M3 EZ55_00378 PF01842 ACT domain EZ55_00378 PF00551 Formyl transferase EZ55_00380 PF00270 DEAD/DEAH box helicase EZ55_00380 PF04408 Helicase associated domain (HA2) EZ55_00380 PF00271 Helicase conserved C-terminal domain EZ55_00380 PF08482 ATP-dependent helicase C-terminal EZ55_00382 PF13406 Transglycosylase SLT domain EZ55_00383 PF14814 Bifunctional transglycosylase second domain EZ55_00383 PF00912 Transglycosylase EZ55_00383 PF00905 Penicillin binding protein transpeptidase domain EZ55_00386 PF05661 Protein of unknown function (DUF808) EZ55_00388 PF12833 Helix-turn-helix domain EZ55_00390 PF00543 Nitrogen regulatory protein P-II EZ55_00391 PF00909 Ammonium Transporter Family EZ55_00394 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_00396 PF04261 Dyp-type peroxidase family EZ55_00397 PF00211 Adenylate and Guanylate cyclase catalytic domain EZ55_00397 PF00672 HAMP domain EZ55_00398 PF00202 Aminotransferase class-III EZ55_00399 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EZ55_00399 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EZ55_00402 PF00873 AcrB/AcrD/AcrF family EZ55_00404 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00404 PF01627 Hpt domain EZ55_00404 PF00072 Response regulator receiver domain EZ55_00404 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EZ55_00404 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00404 PF00672 HAMP domain EZ55_00405 PF03989 DNA gyrase C-terminal domain, beta-propeller EZ55_00405 PF00521 DNA gyrase/topoisomerase IV, subunit A EZ55_00407 PF00563 EAL domain EZ55_00407 PF03707 Bacterial signalling protein N terminal repeat EZ55_00407 PF13188 PAS domain EZ55_00407 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00409 PF00171 Aldehyde dehydrogenase family EZ55_00410 PF04958 Arginine N-succinyltransferase beta subunit EZ55_00411 PF00202 Aminotransferase class-III EZ55_00413 PF00117 Glutamine amidotransferase class-I EZ55_00414 PF00579 tRNA synthetases class I (W and Y) EZ55_00415 PF00834 Ribulose-phosphate 3 epimerase family EZ55_00419 PF02086 D12 class N6 adenine-specific DNA methyltransferase EZ55_00421 PF01761 3-dehydroquinate synthase EZ55_00422 PF01202 Shikimate kinase EZ55_00423 PF11741 AMIN domain EZ55_00423 PF00263 Bacterial type II and III secretion system protein EZ55_00423 PF03958 Bacterial type II/III secretion system short domain EZ55_00423 PF07660 Secretin and TonB N terminus short domain EZ55_00425 PF04350 Pilus assembly protein, PilO EZ55_00426 PF05137 Fimbrial assembly protein (PilN) EZ55_00427 PF11104 Type IV pilus assembly protein PilM; EZ55_00428 PF00905 Penicillin binding protein transpeptidase domain EZ55_00428 PF17092 Penicillin-binding protein OB-like domain EZ55_00428 PF00912 Transglycosylase EZ55_00429 PF03949 Malic enzyme, NAD binding domain EZ55_00429 PF00390 Malic enzyme, N-terminal domain EZ55_00431 PF02798 Glutathione S-transferase, N-terminal domain EZ55_00433 PF00199 Catalase EZ55_00433 PF06628 Catalase-related immune-responsive EZ55_00438 PF00563 EAL domain EZ55_00438 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00438 PF03707 Bacterial signalling protein N terminal repeat EZ55_00439 PF00696 Amino acid kinase family EZ55_00439 PF00583 Acetyltransferase (GNAT) family EZ55_00440 PF00206 Lyase EZ55_00440 PF14698 Argininosuccinate lyase C-terminal EZ55_00441 PF00764 Arginosuccinate synthase EZ55_00442 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EZ55_00442 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EZ55_00443 PF00696 Amino acid kinase family EZ55_00444 PF01118 Semialdehyde dehydrogenase, NAD binding domain EZ55_00444 PF02774 Semialdehyde dehydrogenase, dimerisation domain EZ55_00445 PF02142 MGS-like domain EZ55_00447 PF02107 Flagellar L-ring protein EZ55_00450 PF00486 Transcriptional regulatory protein, C terminal EZ55_00450 PF00072 Response regulator receiver domain EZ55_00451 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00451 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00451 PF00672 HAMP domain EZ55_00451 PF16527 Two-component sensor protein CpxA, periplasmic domain EZ55_00452 PF12146 Serine aminopeptidase, S33 EZ55_00453 PF00588 SpoU rRNA Methylase family EZ55_00454 PF00672 HAMP domain EZ55_00454 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00454 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00454 PF16527 Two-component sensor protein CpxA, periplasmic domain EZ55_00455 PF00072 Response regulator receiver domain EZ55_00455 PF00486 Transcriptional regulatory protein, C terminal EZ55_00459 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_00460 PF02687 FtsX-like permease family EZ55_00460 PF12704 MacB-like periplasmic core domain EZ55_00460 PF00005 ABC transporter EZ55_00461 PF02321 Outer membrane efflux protein EZ55_00463 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EZ55_00463 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EZ55_00464 PF02556 Preprotein translocase subunit SecB EZ55_00465 PF00462 Glutaredoxin EZ55_00466 PF00581 Rhodanese-like domain EZ55_00467 PF01551 Peptidase family M23 EZ55_00468 PF04748 Divergent polysaccharide deacetylase EZ55_00470 PF03009 Glycerophosphoryl diester phosphodiesterase family EZ55_00472 PF02666 Phosphatidylserine decarboxylase EZ55_00473 PF03193 RsgA GTPase EZ55_00474 PF00929 Exonuclease EZ55_00478 PF00593 TonB dependent receptor EZ55_00478 PF07715 TonB-dependent Receptor Plug Domain EZ55_00481 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_00483 PF01609 Transposase DDE domain EZ55_00483 PF13006 Insertion element 4 transposase N-terminal EZ55_00485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EZ55_00485 PF00205 Thiamine pyrophosphate enzyme, central domain EZ55_00485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EZ55_00486 PF10369 Small subunit of acetolactate synthase EZ55_00488 PF02416 mttA/Hcf106 family EZ55_00489 PF02416 mttA/Hcf106 family EZ55_00490 PF00902 Sec-independent protein translocase protein (TatC) EZ55_00492 PF01026 TatD related DNase EZ55_00493 PF00563 EAL domain EZ55_00493 PF00360 Phytochrome region EZ55_00493 PF01590 GAF domain EZ55_00493 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00494 PF00490 Delta-aminolevulinic acid dehydratase EZ55_00495 PF02541 Ppx/GppA phosphatase family EZ55_00496 PF00270 DEAD/DEAH box helicase EZ55_00496 PF00271 Helicase conserved C-terminal domain EZ55_00497 PF00085 Thioredoxin EZ55_00498 PF07498 Rho termination factor, N-terminal domain EZ55_00498 PF07497 Rho termination factor, RNA-binding domain EZ55_00498 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EZ55_00499 PF01546 Peptidase family M20/M25/M40 EZ55_00499 PF07687 Peptidase dimerisation domain EZ55_00500 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00500 PF09308 LuxQ, periplasmic EZ55_00500 PF00072 Response regulator receiver domain EZ55_00501 PF06965 Na+/H+ antiporter 1 EZ55_00502 PF00731 AIR carboxylase EZ55_00503 PF02222 ATP-grasp domain EZ55_00503 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EZ55_00506 PF00210 Ferritin-like domain EZ55_00507 PF07995 Glucose / Sorbosone dehydrogenase EZ55_00508 PF07676 WD40-like Beta Propeller Repeat EZ55_00508 PF00326 Prolyl oligopeptidase family EZ55_00510 PF00085 Thioredoxin EZ55_00513 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) EZ55_00514 PF00709 Adenylosuccinate synthetase EZ55_00515 PF00171 Aldehyde dehydrogenase family EZ55_00519 PF03553 Na+/H+ antiporter family EZ55_00520 PF00933 Glycosyl hydrolase family 3 N terminal domain EZ55_00522 PF07075 Protein of unknown function (DUF1343) EZ55_00523 PF01380 SIS domain EZ55_00524 PF00842 Alanine racemase, C-terminal domain EZ55_00524 PF01168 Alanine racemase, N-terminal domain EZ55_00527 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EZ55_00533 PF00464 Serine hydroxymethyltransferase EZ55_00534 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_00534 PF03466 LysR substrate binding domain EZ55_00535 PF03831 PhnA domain EZ55_00535 PF08274 PhnA Zinc-Ribbon EZ55_00536 PF00583 Acetyltransferase (GNAT) family EZ55_00538 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EZ55_00545 PF02371 Transposase IS116/IS110/IS902 family EZ55_00545 PF01548 Transposase EZ55_00548 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system EZ55_00549 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EZ55_00557 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_00561 PF02371 Transposase IS116/IS110/IS902 family EZ55_00561 PF01548 Transposase EZ55_00568 PF13649 Methyltransferase domain EZ55_00583 PF13649 Methyltransferase domain EZ55_00584 PF13495 Phage integrase, N-terminal SAM-like domain EZ55_00584 PF00589 Phage integrase family EZ55_00585 PF02803 Thiolase, C-terminal domain EZ55_00585 PF00108 Thiolase, N-terminal domain EZ55_00586 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EZ55_00586 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EZ55_00586 PF00378 Enoyl-CoA hydratase/isomerase EZ55_00587 PF01551 Peptidase family M23 EZ55_00587 PF10145 Phage-related minor tail protein EZ55_00587 PF01464 Transglycosylase SLT domain EZ55_00588 PF00557 Metallopeptidase family M24 EZ55_00590 PF00348 Polyprenyl synthetase EZ55_00591 PF00829 Ribosomal prokaryotic L21 protein EZ55_00592 PF01016 Ribosomal L27 protein EZ55_00593 PF01018 GTP1/OBG EZ55_00593 PF01926 50S ribosome-binding GTPase EZ55_00595 PF09055 Nickel-containing superoxide dismutase EZ55_00598 PF00186 Dihydrofolate reductase EZ55_00599 PF00140 Sigma-70 factor, region 1.2 EZ55_00599 PF04542 Sigma-70 region 2 EZ55_00599 PF04539 Sigma-70 region 3 EZ55_00599 PF04545 Sigma-70, region 4 EZ55_00600 PF01476 LysM domain EZ55_00600 PF01551 Peptidase family M23 EZ55_00601 PF09335 SNARE associated Golgi protein EZ55_00603 PF01142 tRNA pseudouridine synthase D (TruD) EZ55_00604 PF02542 YgbB family EZ55_00605 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EZ55_00606 PF04977 Septum formation initiator EZ55_00608 PF00672 HAMP domain EZ55_00608 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00608 PF17200 Single Cache domain 2 EZ55_00609 PF14850 DNA-binding domain of Proline dehydrogenase EZ55_00609 PF01619 Proline dehydrogenase EZ55_00609 PF00171 Aldehyde dehydrogenase family EZ55_00609 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EZ55_00610 PF02321 Outer membrane efflux protein EZ55_00612 PF00873 AcrB/AcrD/AcrF family EZ55_00613 PF00072 Response regulator receiver domain EZ55_00613 PF00486 Transcriptional regulatory protein, C terminal EZ55_00614 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00614 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00618 PF02976 DNA mismatch repair enzyme MutH EZ55_00619 PF00293 NUDIX domain EZ55_00620 PF05524 PEP-utilising enzyme, N-terminal EZ55_00620 PF00391 PEP-utilising enzyme, mobile domain EZ55_00620 PF02896 PEP-utilising enzyme, TIM barrel domain EZ55_00620 PF01590 GAF domain EZ55_00621 PF01925 Sulfite exporter TauE/SafE EZ55_00622 PF01790 Prolipoprotein diacylglyceryl transferase EZ55_00623 PF00303 Thymidylate synthase EZ55_00624 PF00072 Response regulator receiver domain EZ55_00625 PF05230 MASE2 domain EZ55_00625 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00626 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EZ55_00626 PF00072 Response regulator receiver domain EZ55_00626 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00626 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00626 PF00672 HAMP domain EZ55_00626 PF01627 Hpt domain EZ55_00627 PF07690 Major Facilitator Superfamily EZ55_00630 PF00849 RNA pseudouridylate synthase EZ55_00631 PF12137 RNA polymerase recycling family C-terminal EZ55_00631 PF00176 SNF2 family N-terminal domain EZ55_00631 PF18339 RapA N-terminal Tudor like domain 1 EZ55_00631 PF00271 Helicase conserved C-terminal domain EZ55_00631 PF18337 RapA N-terminal Tudor like domain EZ55_00634 PF02562 PhoH-like protein EZ55_00634 PF13638 PIN domain EZ55_00635 PF00155 Aminotransferase class I and II EZ55_00635 PF00392 Bacterial regulatory proteins, gntR family EZ55_00636 PF13746 4Fe-4S dicluster domain EZ55_00636 PF12801 4Fe-4S binding domain EZ55_00636 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EZ55_00638 PF04820 Tryptophan halogenase EZ55_00639 PF10414 Sirohaem synthase dimerisation region EZ55_00639 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EZ55_00640 PF03880 DbpA RNA binding domain EZ55_00640 PF00270 DEAD/DEAH box helicase EZ55_00640 PF00271 Helicase conserved C-terminal domain EZ55_00644 PF02321 Outer membrane efflux protein EZ55_00645 PF00293 NUDIX domain EZ55_00647 PF00149 Calcineurin-like phosphoesterase EZ55_00648 PF05728 Uncharacterised protein family (UPF0227) EZ55_00649 PF00204 DNA gyrase B EZ55_00649 PF00986 DNA gyrase B subunit, carboxyl terminus EZ55_00649 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00649 PF01751 Toprim domain EZ55_00650 PF18766 SWI2/SNF2 ATPase EZ55_00650 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EZ55_00650 PF11867 Domain of unknown function (DUF3387) EZ55_00653 PF00012 Hsp70 protein EZ55_00654 PF01434 Peptidase family M41 EZ55_00654 PF17862 AAA+ lid domain EZ55_00654 PF00004 ATPase family associated with various cellular activities (AAA) EZ55_00657 PF13808 DDE_Tnp_1-associated EZ55_00657 PF01609 Transposase DDE domain EZ55_00659 PF13419 Haloacid dehalogenase-like hydrolase EZ55_00663 PF04055 Radical SAM superfamily EZ55_00664 PF01132 Elongation factor P (EF-P) OB domain EZ55_00664 PF08207 Elongation factor P (EF-P) KOW-like domain EZ55_00664 PF09285 Elongation factor P, C-terminal EZ55_00665 PF00152 tRNA synthetases class II (D, K and N) EZ55_00666 PF07715 TonB-dependent Receptor Plug Domain EZ55_00666 PF00593 TonB dependent receptor EZ55_00669 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EZ55_00670 PF05175 Methyltransferase small domain EZ55_00673 PF01722 BolA-like protein EZ55_00674 PF01569 PAP2 superfamily EZ55_00676 PF03861 ANTAR domain EZ55_00676 PF08376 Nitrate and nitrite sensing EZ55_00678 PF01740 STAS domain EZ55_00678 PF00916 Sulfate permease family EZ55_00679 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_00679 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EZ55_00679 PF18267 Rubredoxin NAD+ reductase C-terminal domain EZ55_00679 PF04324 BFD-like [2Fe-2S] binding domain EZ55_00679 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EZ55_00680 PF13806 Rieske-like [2Fe-2S] domain EZ55_00681 PF04324 BFD-like [2Fe-2S] binding domain EZ55_00681 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EZ55_00681 PF00384 Molybdopterin oxidoreductase EZ55_00681 PF01568 Molydopterin dinucleotide binding domain EZ55_00682 PF10414 Sirohaem synthase dimerisation region EZ55_00682 PF14824 Sirohaem biosynthesis protein central EZ55_00682 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EZ55_00683 PF02885 Glycosyl transferase family, helical bundle domain EZ55_00683 PF00591 Glycosyl transferase family, a/b domain EZ55_00684 PF02872 5'-nucleotidase, C-terminal domain EZ55_00684 PF00149 Calcineurin-like phosphoesterase EZ55_00685 PF00563 EAL domain EZ55_00685 PF01590 GAF domain EZ55_00685 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00685 PF00360 Phytochrome region EZ55_00686 PF13426 PAS domain EZ55_00686 PF08447 PAS fold EZ55_00686 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00688 PF00005 ABC transporter EZ55_00689 PF00528 Binding-protein-dependent transport system inner membrane component EZ55_00690 PF00005 ABC transporter EZ55_00693 PF01323 DSBA-like thioredoxin domain EZ55_00694 PF07715 TonB-dependent Receptor Plug Domain EZ55_00694 PF00593 TonB dependent receptor EZ55_00696 PF01636 Phosphotransferase enzyme family EZ55_00697 PF12801 4Fe-4S binding domain EZ55_00697 PF13746 4Fe-4S dicluster domain EZ55_00697 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EZ55_00700 PF12806 Acetyl-CoA dehydrogenase C-terminal like EZ55_00700 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_00700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_00700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_00703 PF13378 Enolase C-terminal domain-like EZ55_00703 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EZ55_00704 PF00596 Class II Aldolase and Adducin N-terminal domain EZ55_00706 PF02371 Transposase IS116/IS110/IS902 family EZ55_00706 PF01548 Transposase EZ55_00707 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_00708 PF00873 AcrB/AcrD/AcrF family EZ55_00711 PF00672 HAMP domain EZ55_00711 PF02743 Cache domain EZ55_00711 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00712 PF04546 Sigma-70, non-essential region EZ55_00712 PF03979 Sigma-70 factor, region 1.1 EZ55_00712 PF00140 Sigma-70 factor, region 1.2 EZ55_00712 PF04539 Sigma-70 region 3 EZ55_00712 PF04545 Sigma-70, region 4 EZ55_00712 PF04542 Sigma-70 region 2 EZ55_00713 PF08275 DNA primase catalytic core, N-terminal domain EZ55_00713 PF01807 CHC2 zinc finger EZ55_00713 PF10410 DnaB-helicase binding domain of primase EZ55_00713 PF08278 DNA primase DnaG DnaB-binding EZ55_00715 PF01165 Ribosomal protein S21 EZ55_00716 PF00814 Glycoprotease family EZ55_00718 PF02660 Glycerol-3-phosphate acyltransferase EZ55_00719 PF02152 Dihydroneopterin aldolase EZ55_00721 PF02673 Bacitracin resistance protein BacA EZ55_00722 PF01230 HIT domain EZ55_00725 PF03594 Benzoate membrane transport protein EZ55_00726 PF07883 Cupin domain EZ55_00726 PF01381 Helix-turn-helix EZ55_00727 PF04381 Putative exonuclease, RdgC EZ55_00728 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00728 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00728 PF00497 Bacterial extracellular solute-binding proteins, family 3 EZ55_00729 PF00072 Response regulator receiver domain EZ55_00729 PF00486 Transcriptional regulatory protein, C terminal EZ55_00730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00730 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00730 PF00989 PAS fold EZ55_00730 PF11808 Phosphate regulon sensor protein PhoR EZ55_00731 PF12849 PBP superfamily domain EZ55_00736 PF01618 MotA/TolQ/ExbB proton channel family EZ55_00737 PF01618 MotA/TolQ/ExbB proton channel family EZ55_00738 PF02472 Biopolymer transport protein ExbD/TolR EZ55_00739 PF03544 Gram-negative bacterial TonB protein C-terminal EZ55_00741 PF00072 Response regulator receiver domain EZ55_00742 PF00672 HAMP domain EZ55_00742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00742 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00742 PF01627 Hpt domain EZ55_00742 PF00072 Response regulator receiver domain EZ55_00742 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EZ55_00743 PF00501 AMP-binding enzyme EZ55_00743 PF13193 AMP-binding enzyme C-terminal domain EZ55_00745 PF07995 Glucose / Sorbosone dehydrogenase EZ55_00746 PF11791 Aconitate B N-terminal domain EZ55_00746 PF00330 Aconitase family (aconitate hydratase) EZ55_00746 PF06434 Aconitate hydratase 2 N-terminus EZ55_00747 PF01627 Hpt domain EZ55_00747 PF00072 Response regulator receiver domain EZ55_00747 PF17149 Periplasmic sensor domain found in signal transduction proteins EZ55_00747 PF00672 HAMP domain EZ55_00747 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00747 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00751 PF02371 Transposase IS116/IS110/IS902 family EZ55_00751 PF01548 Transposase EZ55_00752 PF00330 Aconitase family (aconitate hydratase) EZ55_00752 PF06434 Aconitate hydratase 2 N-terminus EZ55_00752 PF11791 Aconitate B N-terminal domain EZ55_00754 PF00696 Amino acid kinase family EZ55_00754 PF01842 ACT domain EZ55_00756 PF00672 HAMP domain EZ55_00756 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00757 PF00149 Calcineurin-like phosphoesterase EZ55_00758 PF04379 ApaG domain EZ55_00759 PF00398 Ribosomal RNA adenine dimethylase EZ55_00760 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EZ55_00761 PF00639 PPIC-type PPIASE domain EZ55_00761 PF09312 SurA N-terminal domain EZ55_00762 PF04453 LPS transport system D EZ55_00762 PF03968 OstA-like protein EZ55_00763 PF00226 DnaJ domain EZ55_00763 PF05099 Tellurite resistance protein TerB EZ55_00764 PF02899 Phage integrase, N-terminal SAM-like domain EZ55_00764 PF00589 Phage integrase family EZ55_00765 PF10411 Disulfide bond isomerase protein N-terminus EZ55_00765 PF13098 Thioredoxin-like domain EZ55_00766 PF02272 DHHA1 domain EZ55_00766 PF17768 RecJ OB domain EZ55_00766 PF01368 DHH family EZ55_00768 PF02565 Recombination protein O C terminal EZ55_00768 PF11967 Recombination protein O N terminal EZ55_00769 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EZ55_00770 PF01648 4'-phosphopantetheinyl transferase superfamily EZ55_00771 PF05958 tRNA (Uracil-5-)-methyltransferase EZ55_00772 PF13291 ACT domain EZ55_00772 PF04607 Region found in RelA / SpoT proteins EZ55_00772 PF02824 TGS domain EZ55_00773 PF03819 MazG nucleotide pyrophosphohydrolase domain EZ55_00779 PF13193 AMP-binding enzyme C-terminal domain EZ55_00779 PF00501 AMP-binding enzyme EZ55_00781 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EZ55_00783 PF00535 Glycosyl transferase family 2 EZ55_00787 PF08521 Two-component sensor kinase N-terminal EZ55_00787 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00787 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00788 PF00486 Transcriptional regulatory protein, C terminal EZ55_00788 PF00072 Response regulator receiver domain EZ55_00790 PF00572 Ribosomal protein L13 EZ55_00791 PF00380 Ribosomal protein S9/S16 EZ55_00792 PF00355 Rieske [2Fe-2S] domain EZ55_00792 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EZ55_00793 PF00032 Cytochrome b(C-terminal)/b6/petD EZ55_00793 PF00033 Cytochrome b/b6/petB EZ55_00794 PF02167 Cytochrome C1 family EZ55_00795 PF00043 Glutathione S-transferase, C-terminal domain EZ55_00795 PF02798 Glutathione S-transferase, N-terminal domain EZ55_00796 PF04386 Stringent starvation protein B EZ55_00799 PF00072 Response regulator receiver domain EZ55_00799 PF00486 Transcriptional regulatory protein, C terminal EZ55_00800 PF03448 MgtE intracellular N domain EZ55_00800 PF00571 CBS domain EZ55_00800 PF01769 Divalent cation transporter EZ55_00801 PF00381 PTS HPr component phosphorylation site EZ55_00802 PF03668 P-loop ATPase protein family EZ55_00803 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EZ55_00804 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EZ55_00805 PF04963 Sigma-54 factor, core binding domain EZ55_00805 PF04552 Sigma-54, DNA binding domain EZ55_00805 PF00309 Sigma-54 factor, Activator interacting domain (AID) EZ55_00806 PF00005 ABC transporter EZ55_00806 PF12399 Branched-chain amino acid ATP-binding cassette transporter EZ55_00807 PF03968 OstA-like protein EZ55_00810 PF00571 CBS domain EZ55_00810 PF01380 SIS domain EZ55_00811 PF01699 Sodium/calcium exchanger protein EZ55_00812 PF00005 ABC transporter EZ55_00813 PF02405 Permease MlaE EZ55_00814 PF02470 MlaD protein EZ55_00815 PF05494 MlaC protein EZ55_00817 PF01722 BolA-like protein EZ55_00818 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EZ55_00819 PF13180 PDZ domain EZ55_00820 PF00595 PDZ domain EZ55_00820 PF13180 PDZ domain EZ55_00822 PF03969 AFG1-like ATPase EZ55_00823 PF01709 Transcriptional regulator EZ55_00826 PF00881 Nitroreductase family EZ55_00828 PF14403 Circularly permuted ATP-grasp type 2 EZ55_00829 PF08379 Bacterial transglutaminase-like N-terminal region EZ55_00829 PF01841 Transglutaminase-like superfamily EZ55_00830 PF04168 A predicted alpha-helical domain with a conserved ER motif. EZ55_00830 PF14403 Circularly permuted ATP-grasp type 2 EZ55_00833 PF07549 SecD/SecF GG Motif EZ55_00833 PF02355 Protein export membrane protein EZ55_00834 PF00999 Sodium/hydrogen exchanger family EZ55_00834 PF03471 Transporter associated domain EZ55_00834 PF02080 TrkA-C domain EZ55_00837 PF00593 TonB dependent receptor EZ55_00837 PF07715 TonB-dependent Receptor Plug Domain EZ55_00838 PF00892 EamA-like transporter family EZ55_00840 PF09308 LuxQ, periplasmic EZ55_00840 PF00512 His Kinase A (phospho-acceptor) domain EZ55_00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_00840 PF00072 Response regulator receiver domain EZ55_00841 PF13458 Periplasmic binding protein EZ55_00844 PF00438 S-adenosylmethionine synthetase, N-terminal domain EZ55_00844 PF02773 S-adenosylmethionine synthetase, C-terminal domain EZ55_00844 PF02772 S-adenosylmethionine synthetase, central domain EZ55_00845 PF02780 Transketolase, C-terminal domain EZ55_00845 PF00456 Transketolase, thiamine diphosphate binding domain EZ55_00845 PF02779 Transketolase, pyrimidine binding domain EZ55_00846 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EZ55_00846 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EZ55_00847 PF00162 Phosphoglycerate kinase EZ55_00848 PF00274 Fructose-bisphosphate aldolase class-I EZ55_00850 PF00529 HlyD membrane-fusion protein of T1SS EZ55_00850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_00851 PF00873 AcrB/AcrD/AcrF family EZ55_00852 PF02321 Outer membrane efflux protein EZ55_00854 PF00326 Prolyl oligopeptidase family EZ55_00854 PF07676 WD40-like Beta Propeller Repeat EZ55_00855 PF02541 Ppx/GppA phosphatase family EZ55_00856 PF02503 Polyphosphate kinase middle domain EZ55_00856 PF13089 Polyphosphate kinase N-terminal domain EZ55_00856 PF17941 Polyphosphate kinase C-terminal domain 1 EZ55_00856 PF13090 Polyphosphate kinase C-terminal domain 2 EZ55_00858 PF00528 Binding-protein-dependent transport system inner membrane component EZ55_00859 PF00528 Binding-protein-dependent transport system inner membrane component EZ55_00860 PF00005 ABC transporter EZ55_00861 PF01895 PhoU domain EZ55_00862 PF01384 Phosphate transporter family EZ55_00864 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_00864 PF03466 LysR substrate binding domain EZ55_00869 PF03006 Haemolysin-III related EZ55_00871 PF01047 MarR family EZ55_00872 PF02566 OsmC-like protein EZ55_00873 PF01433 Peptidase family M1 domain EZ55_00876 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_00878 PF01205 Uncharacterized protein family UPF0029 EZ55_00878 PF09186 Domain of unknown function (DUF1949) EZ55_00880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_00880 PF08447 PAS fold EZ55_00880 PF13426 PAS domain EZ55_00882 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_00882 PF03466 LysR substrate binding domain EZ55_00883 PF00248 Aldo/keto reductase family EZ55_00885 PF00128 Alpha amylase, catalytic domain EZ55_00885 PF02806 Alpha amylase, C-terminal all-beta domain EZ55_00885 PF03714 Bacterial pullanase-associated domain EZ55_00889 PF00149 Calcineurin-like phosphoesterase EZ55_00889 PF12320 Type 5 capsule protein repressor C-terminal domain EZ55_00890 PF13476 AAA domain EZ55_00892 PF00375 Sodium:dicarboxylate symporter family EZ55_00893 PF00491 Arginase family EZ55_00894 PF01979 Amidohydrolase family EZ55_00895 PF00392 Bacterial regulatory proteins, gntR family EZ55_00895 PF07702 UTRA domain EZ55_00896 PF01175 Urocanase Rossmann-like domain EZ55_00896 PF17392 Urocanase C-terminal domain EZ55_00896 PF17391 Urocanase N-terminal domain EZ55_00897 PF00221 Aromatic amino acid lyase EZ55_00900 PF01548 Transposase EZ55_00900 PF02371 Transposase IS116/IS110/IS902 family EZ55_00901 PF01869 BadF/BadG/BcrA/BcrD ATPase family EZ55_00902 PF01979 Amidohydrolase family EZ55_00904 PF00005 ABC transporter EZ55_00904 PF12848 ABC transporter EZ55_00910 PF00924 Mechanosensitive ion channel EZ55_00912 PF00544 Pectate lyase EZ55_00915 PF07690 Major Facilitator Superfamily EZ55_00932 PF03150 Di-haem cytochrome c peroxidase EZ55_00938 PF04172 LrgB-like family EZ55_00939 PF00072 Response regulator receiver domain EZ55_00944 PF04055 Radical SAM superfamily EZ55_00944 PF06969 HemN C-terminal domain EZ55_00945 PF01725 Ham1 family EZ55_00946 PF00270 DEAD/DEAH box helicase EZ55_00946 PF00271 Helicase conserved C-terminal domain EZ55_00949 PF01743 Poly A polymerase head domain EZ55_00949 PF12627 Probable RNA and SrmB- binding site of polymerase A EZ55_00950 PF13401 AAA domain EZ55_00950 PF01471 Putative peptidoglycan binding domain EZ55_00952 PF11871 Domain of unknown function (DUF3391) EZ55_00952 PF01966 HD domain EZ55_00953 PF00694 Aconitase C-terminal domain EZ55_00954 PF00330 Aconitase family (aconitate hydratase) EZ55_00955 PF00180 Isocitrate/isopropylmalate dehydrogenase EZ55_00956 PF00682 HMGL-like EZ55_00956 PF08502 LeuA allosteric (dimerisation) domain EZ55_00958 PF03952 Enolase, N-terminal domain EZ55_00958 PF00113 Enolase, C-terminal TIM barrel domain EZ55_00959 PF06418 CTP synthase N-terminus EZ55_00959 PF00117 Glutamine amidotransferase class-I EZ55_00960 PF05188 MutS domain II EZ55_00960 PF00488 MutS domain V EZ55_00960 PF05190 MutS family domain IV EZ55_00960 PF01624 MutS domain I EZ55_00960 PF05192 MutS domain III EZ55_00961 PF02464 Competence-damaged protein EZ55_00962 PF00154 recA bacterial DNA recombination protein EZ55_00963 PF00005 ABC transporter EZ55_00964 PF12679 ABC-2 family transporter protein EZ55_00967 PF00005 ABC transporter EZ55_00968 PF03379 CcmB protein EZ55_00969 PF01578 Cytochrome C assembly protein EZ55_00970 PF04995 Heme exporter protein D (CcmD) EZ55_00971 PF03100 CcmE EZ55_00972 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EZ55_00972 PF01578 Cytochrome C assembly protein EZ55_00973 PF08534 Redoxin EZ55_00974 PF03918 Cytochrome C biogenesis protein EZ55_00976 PF04333 MlaA lipoprotein EZ55_00977 PF16363 GDP-mannose 4,6 dehydratase EZ55_00979 PF00854 POT family EZ55_00981 PF00005 ABC transporter EZ55_00983 PF02563 Polysaccharide biosynthesis/export protein EZ55_00983 PF10531 SLBB domain EZ55_00985 PF00953 Glycosyl transferase family 4 EZ55_00986 PF00535 Glycosyl transferase family 2 EZ55_00988 PF00483 Nucleotidyl transferase EZ55_00989 PF10531 SLBB domain EZ55_00990 PF18324 Hypothetical protein TT1725 EZ55_00990 PF00180 Isocitrate/isopropylmalate dehydrogenase EZ55_00993 PF03641 Possible lysine decarboxylase EZ55_00993 PF11892 Domain of unknown function (DUF3412) EZ55_00993 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EZ55_00994 PF00990 Diguanylate cyclase, GGDEF domain EZ55_00995 PF14489 QueF-like protein EZ55_00995 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EZ55_00996 PF07348 Syd protein (SUKH-2) EZ55_01000 PF00483 Nucleotidyl transferase EZ55_01001 PF00011 Hsp20/alpha crystallin family EZ55_01006 PF00849 RNA pseudouridylate synthase EZ55_01007 PF00258 Flavodoxin EZ55_01008 PF14602 Hexapeptide repeat of succinyl-transferase EZ55_01008 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_01008 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EZ55_01009 PF01966 HD domain EZ55_01009 PF08335 GlnD PII-uridylyltransferase EZ55_01009 PF01909 Nucleotidyltransferase domain EZ55_01010 PF00557 Metallopeptidase family M24 EZ55_01012 PF00318 Ribosomal protein S2 EZ55_01013 PF00889 Elongation factor TS EZ55_01014 PF00696 Amino acid kinase family EZ55_01015 PF01765 Ribosome recycling factor EZ55_01016 PF01255 Putative undecaprenyl diphosphate synthase EZ55_01018 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EZ55_01018 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EZ55_01018 PF13288 DXP reductoisomerase C-terminal domain EZ55_01019 PF17820 PDZ domain EZ55_01019 PF02163 Peptidase family M50 EZ55_01020 PF07244 Surface antigen variable number repeat EZ55_01020 PF01103 Surface antigen EZ55_01021 PF03938 Outer membrane protein (OmpH-like) EZ55_01022 PF07977 FabA-like domain EZ55_01023 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EZ55_01023 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_01024 PF02684 Lipid-A-disaccharide synthetase EZ55_01025 PF01351 Ribonuclease HII EZ55_01026 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EZ55_01026 PF07733 Bacterial DNA polymerase III alpha NTPase domain EZ55_01026 PF14579 Helix-hairpin-helix motif EZ55_01026 PF02811 PHP domain EZ55_01026 PF01336 OB-fold nucleic acid binding domain EZ55_01027 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EZ55_01028 PF09179 TilS substrate binding domain EZ55_01028 PF01171 PP-loop family EZ55_01028 PF11734 TilS substrate C-terminal domain EZ55_01029 PF03707 Bacterial signalling protein N terminal repeat EZ55_01029 PF00563 EAL domain EZ55_01029 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01030 PF00999 Sodium/hydrogen exchanger family EZ55_01030 PF02080 TrkA-C domain EZ55_01030 PF02254 TrkA-N domain EZ55_01032 PF14437 MafB19-like deaminase EZ55_01034 PF01464 Transglycosylase SLT domain EZ55_01034 PF00497 Bacterial extracellular solute-binding proteins, family 3 EZ55_01035 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EZ55_01035 PF02769 AIR synthase related protein, C-terminal domain EZ55_01035 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EZ55_01037 PF01713 Smr domain EZ55_01045 PF01584 CheW-like domain EZ55_01045 PF00072 Response regulator receiver domain EZ55_01046 PF01739 CheR methyltransferase, SAM binding domain EZ55_01046 PF03705 CheR methyltransferase, all-alpha domain EZ55_01047 PF00460 Flagella basal body rod protein EZ55_01048 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EZ55_01048 PF00460 Flagella basal body rod protein EZ55_01049 PF13861 FlgD Tudor-like domain EZ55_01049 PF13860 FlgD Ig-like domain EZ55_01049 PF03963 Flagellar hook capping protein - N-terminal region EZ55_01050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EZ55_01050 PF07559 Flagellar basal body protein FlaE EZ55_01050 PF00460 Flagella basal body rod protein EZ55_01051 PF00460 Flagella basal body rod protein EZ55_01051 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EZ55_01052 PF00460 Flagella basal body rod protein EZ55_01052 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EZ55_01053 PF02107 Flagellar L-ring protein EZ55_01054 PF02119 Flagellar P-ring protein EZ55_01055 PF10135 Rod binding protein EZ55_01055 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EZ55_01059 PF07196 Flagellin hook IN motif EZ55_01059 PF00700 Bacterial flagellin C-terminal helical region EZ55_01059 PF00669 Bacterial flagellin N-terminal helical region EZ55_01060 PF07196 Flagellin hook IN motif EZ55_01060 PF00669 Bacterial flagellin N-terminal helical region EZ55_01060 PF00700 Bacterial flagellin C-terminal helical region EZ55_01061 PF00700 Bacterial flagellin C-terminal helical region EZ55_01061 PF07196 Flagellin hook IN motif EZ55_01061 PF00669 Bacterial flagellin N-terminal helical region EZ55_01062 PF03646 FlaG protein EZ55_01063 PF07196 Flagellin hook IN motif EZ55_01063 PF07195 Flagellar hook-associated protein 2 C-terminus EZ55_01063 PF02465 Flagellar hook-associated protein 2 N-terminus EZ55_01064 PF02561 Flagellar protein FliS EZ55_01068 PF00700 Bacterial flagellin C-terminal helical region EZ55_01068 PF00669 Bacterial flagellin N-terminal helical region EZ55_01069 PF02954 Bacterial regulatory protein, Fis family EZ55_01069 PF00158 Sigma-54 interaction domain EZ55_01069 PF06490 Flagellar regulatory protein FleQ EZ55_01070 PF06490 Flagellar regulatory protein FleQ EZ55_01070 PF02954 Bacterial regulatory protein, Fis family EZ55_01070 PF00158 Sigma-54 interaction domain EZ55_01071 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01071 PF00512 His Kinase A (phospho-acceptor) domain EZ55_01071 PF13188 PAS domain EZ55_01072 PF02954 Bacterial regulatory protein, Fis family EZ55_01072 PF00072 Response regulator receiver domain EZ55_01072 PF00158 Sigma-54 interaction domain EZ55_01073 PF02049 Flagellar hook-basal body complex protein FliE EZ55_01074 PF08345 Flagellar M-ring protein C-terminal EZ55_01074 PF01514 Secretory protein of YscJ/FliF family EZ55_01075 PF01706 FliG C-terminal domain EZ55_01075 PF14841 FliG middle domain EZ55_01075 PF14842 FliG N-terminal domain EZ55_01077 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EZ55_01077 PF18269 T3SS EscN ATPase C-terminal domain EZ55_01081 PF02154 Flagellar motor switch protein FliM EZ55_01081 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EZ55_01082 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EZ55_01083 PF04347 Flagellar biosynthesis protein, FliO EZ55_01084 PF00813 FliP family EZ55_01085 PF01313 Bacterial export proteins, family 3 EZ55_01086 PF01311 Bacterial export proteins, family 1 EZ55_01087 PF01312 FlhB HrpN YscU SpaS Family EZ55_01089 PF03734 L,D-transpeptidase catalytic domain EZ55_01090 PF00771 FHIPEP family EZ55_01091 PF00448 SRP54-type protein, GTPase domain EZ55_01092 PF10609 NUBPL iron-transfer P-loop NTPase EZ55_01093 PF04542 Sigma-70 region 2 EZ55_01093 PF04539 Sigma-70 region 3 EZ55_01093 PF04545 Sigma-70, region 4 EZ55_01094 PF00072 Response regulator receiver domain EZ55_01095 PF04344 Chemotaxis phosphatase, CheZ EZ55_01096 PF00072 Response regulator receiver domain EZ55_01096 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01096 PF01627 Hpt domain EZ55_01096 PF01584 CheW-like domain EZ55_01096 PF02895 Signal transducing histidine kinase, homodimeric domain EZ55_01097 PF01339 CheB methylesterase EZ55_01097 PF00072 Response regulator receiver domain EZ55_01098 PF13614 AAA domain EZ55_01100 PF01584 CheW-like domain EZ55_01102 PF04204 Homoserine O-succinyltransferase EZ55_01103 PF02574 Homocysteine S-methyltransferase EZ55_01103 PF02310 B12 binding domain EZ55_01103 PF02607 B12 binding domain EZ55_01103 PF02965 Vitamin B12 dependent methionine synthase, activation domain EZ55_01103 PF00809 Pterin binding enzyme EZ55_01104 PF00809 Pterin binding enzyme EZ55_01104 PF02965 Vitamin B12 dependent methionine synthase, activation domain EZ55_01104 PF02310 B12 binding domain EZ55_01104 PF02574 Homocysteine S-methyltransferase EZ55_01104 PF02607 B12 binding domain EZ55_01106 PF06865 Pyrimidine/purine nucleoside phosphorylase EZ55_01107 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_01107 PF00672 HAMP domain EZ55_01107 PF02743 Cache domain EZ55_01108 PF03466 LysR substrate binding domain EZ55_01108 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01109 PF03466 LysR substrate binding domain EZ55_01109 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01110 PF00484 Carbonic anhydrase EZ55_01111 PF00916 Sulfate permease family EZ55_01111 PF01740 STAS domain EZ55_01113 PF13977 BetI-type transcriptional repressor, C-terminal EZ55_01113 PF00440 Bacterial regulatory proteins, tetR family EZ55_01114 PF01431 Peptidase family M13 EZ55_01114 PF05649 Peptidase family M13 EZ55_01116 PF02631 RecX family EZ55_01117 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EZ55_01117 PF02272 DHHA1 domain EZ55_01117 PF01411 tRNA synthetases class II (A) EZ55_01118 PF02599 Global regulator protein family EZ55_01123 PF03061 Thioesterase superfamily EZ55_01125 PF00364 Biotin-requiring enzyme EZ55_01125 PF00682 HMGL-like EZ55_01125 PF02436 Conserved carboxylase domain EZ55_01126 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EZ55_01127 PF00005 ABC transporter EZ55_01128 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EZ55_01128 PF00005 ABC transporter EZ55_01129 PF00528 Binding-protein-dependent transport system inner membrane component EZ55_01129 PF12911 N-terminal TM domain of oligopeptide transport permease C EZ55_01130 PF00528 Binding-protein-dependent transport system inner membrane component EZ55_01131 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EZ55_01132 PF02954 Bacterial regulatory protein, Fis family EZ55_01132 PF00158 Sigma-54 interaction domain EZ55_01133 PF04012 PspA/IM30 family EZ55_01136 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EZ55_01137 PF00158 Sigma-54 interaction domain EZ55_01137 PF18024 Helix-turn-helix domain EZ55_01139 PF14497 Glutathione S-transferase, C-terminal domain EZ55_01139 PF02798 Glutathione S-transferase, N-terminal domain EZ55_01140 PF01037 Lrp/AsnC ligand binding domain EZ55_01141 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EZ55_01141 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EZ55_01144 PF03301 Tryptophan 2,3-dioxygenase EZ55_01145 PF00593 TonB dependent receptor EZ55_01146 PF07715 TonB-dependent Receptor Plug Domain EZ55_01146 PF00593 TonB dependent receptor EZ55_01153 PF01618 MotA/TolQ/ExbB proton channel family EZ55_01154 PF01618 MotA/TolQ/ExbB proton channel family EZ55_01155 PF02472 Biopolymer transport protein ExbD/TolR EZ55_01156 PF03544 Gram-negative bacterial TonB protein C-terminal EZ55_01158 PF17176 tRNA-binding domain EZ55_01158 PF05127 Helicase EZ55_01158 PF13718 GNAT acetyltransferase 2 EZ55_01158 PF08351 Domain of unknown function (DUF1726) EZ55_01164 PF01636 Phosphotransferase enzyme family EZ55_01167 PF00583 Acetyltransferase (GNAT) family EZ55_01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01170 PF03466 LysR substrate binding domain EZ55_01171 PF07690 Major Facilitator Superfamily EZ55_01174 PF02371 Transposase IS116/IS110/IS902 family EZ55_01174 PF01548 Transposase EZ55_01176 PF13533 Biotin-lipoyl like EZ55_01177 PF01047 MarR family EZ55_01178 PF04397 LytTr DNA-binding domain EZ55_01178 PF00072 Response regulator receiver domain EZ55_01179 PF07694 5TMR of 5TMR-LYT EZ55_01179 PF06580 Histidine kinase EZ55_01180 PF02554 Carbon starvation protein CstA EZ55_01181 PF00009 Elongation factor Tu GTP binding domain EZ55_01181 PF03144 Elongation factor Tu domain 2 EZ55_01181 PF16658 Class II release factor RF3, C-terminal domain EZ55_01182 PF03485 Arginyl tRNA synthetase N terminal domain EZ55_01182 PF05746 DALR anticodon binding domain EZ55_01182 PF00750 tRNA synthetases class I (R) EZ55_01184 PF13181 Tetratricopeptide repeat EZ55_01186 PF01011 PQQ enzyme repeat EZ55_01186 PF13360 PQQ-like domain EZ55_01187 PF00196 Bacterial regulatory proteins, luxR family EZ55_01187 PF00072 Response regulator receiver domain EZ55_01189 PF00291 Pyridoxal-phosphate dependent enzyme EZ55_01191 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01192 PF04224 Protein of unknown function, DUF417 EZ55_01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01195 PF03466 LysR substrate binding domain EZ55_01196 PF05368 NmrA-like family EZ55_01198 PF00487 Fatty acid desaturase EZ55_01199 PF00970 Oxidoreductase FAD-binding domain EZ55_01199 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_01199 PF00175 Oxidoreductase NAD-binding domain EZ55_01200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EZ55_01202 PF03462 PCRF domain EZ55_01202 PF00472 RF-1 domain EZ55_01203 PF00152 tRNA synthetases class II (D, K and N) EZ55_01203 PF01336 OB-fold nucleic acid binding domain EZ55_01204 PF08546 Ketopantoate reductase PanE/ApbA C terminal EZ55_01204 PF02558 Ketopantoate reductase PanE/ApbA EZ55_01206 PF00849 RNA pseudouridylate synthase EZ55_01208 PF00675 Insulinase (Peptidase family M16) EZ55_01208 PF05193 Peptidase M16 inactive domain EZ55_01209 PF04262 Glutamate-cysteine ligase EZ55_01214 PF01713 Smr domain EZ55_01215 PF05175 Methyltransferase small domain EZ55_01216 PF01264 Chorismate synthase EZ55_01218 PF04293 SpoVR like protein EZ55_01219 PF04285 Protein of unknown function (DUF444) EZ55_01220 PF08298 PrkA AAA domain EZ55_01220 PF06798 PrkA serine protein kinase C-terminal domain EZ55_01223 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EZ55_01223 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EZ55_01224 PF00462 Glutaredoxin EZ55_01225 PF07715 TonB-dependent Receptor Plug Domain EZ55_01225 PF00593 TonB dependent receptor EZ55_01229 PF04324 BFD-like [2Fe-2S] binding domain EZ55_01230 PF10417 C-terminal domain of 1-Cys peroxiredoxin EZ55_01230 PF00578 AhpC/TSA family EZ55_01231 PF00929 Exonuclease EZ55_01232 PF18393 MotY N-terminal domain EZ55_01232 PF00691 OmpA family EZ55_01233 PF03009 Glycerophosphoryl diester phosphodiesterase family EZ55_01234 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EZ55_01235 PF00106 short chain dehydrogenase EZ55_01237 PF00313 'Cold-shock' DNA-binding domain EZ55_01239 PF02225 PA domain EZ55_01239 PF04389 Peptidase family M28 EZ55_01240 PF10576 Iron-sulfur binding domain of endonuclease III EZ55_01240 PF00633 Helix-hairpin-helix motif EZ55_01240 PF00730 HhH-GPD superfamily base excision DNA repair protein EZ55_01241 PF02508 Rnf-Nqr subunit, membrane protein EZ55_01242 PF04205 FMN-binding domain EZ55_01243 PF03116 NQR2, RnfD, RnfE family EZ55_01244 PF10531 SLBB domain EZ55_01244 PF13375 RnfC Barrel sandwich hybrid domain EZ55_01244 PF12838 4Fe-4S dicluster domain EZ55_01244 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EZ55_01245 PF04060 Putative Fe-S cluster EZ55_01246 PF02508 Rnf-Nqr subunit, membrane protein EZ55_01249 PF01554 MatE EZ55_01250 PF00271 Helicase conserved C-terminal domain EZ55_01250 PF17757 UvrB interaction domain EZ55_01250 PF12344 Ultra-violet resistance protein B EZ55_01250 PF02151 UvrB/uvrC motif EZ55_01250 PF04851 Type III restriction enzyme, res subunit EZ55_01252 PF06508 Queuosine biosynthesis protein QueC EZ55_01253 PF04055 Radical SAM superfamily EZ55_01255 PF13006 Insertion element 4 transposase N-terminal EZ55_01255 PF01609 Transposase DDE domain EZ55_01256 PF13537 Glutamine amidotransferase domain EZ55_01256 PF00733 Asparagine synthase EZ55_01259 PF01548 Transposase EZ55_01259 PF02371 Transposase IS116/IS110/IS902 family EZ55_01261 PF03600 Citrate transporter EZ55_01261 PF02080 TrkA-C domain EZ55_01262 PF00009 Elongation factor Tu GTP binding domain EZ55_01263 PF00459 Inositol monophosphatase family EZ55_01265 PF01507 Phosphoadenosine phosphosulfate reductase family EZ55_01266 PF00474 Sodium:solute symporter family EZ55_01267 PF00072 Response regulator receiver domain EZ55_01267 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01269 PF04542 Sigma-70 region 2 EZ55_01269 PF08281 Sigma-70, region 4 EZ55_01272 PF07584 Aerotolerance regulator N-terminal EZ55_01272 PF13519 von Willebrand factor type A domain EZ55_01273 PF00092 von Willebrand factor type A domain EZ55_01275 PF01882 Protein of unknown function DUF58 EZ55_01276 PF17863 AAA lid domain EZ55_01276 PF07726 ATPase family associated with various cellular activities (AAA) EZ55_01278 PF00108 Thiolase, N-terminal domain EZ55_01278 PF02803 Thiolase, C-terminal domain EZ55_01279 PF00378 Enoyl-CoA hydratase/isomerase EZ55_01279 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EZ55_01279 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EZ55_01282 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_01285 PF03707 Bacterial signalling protein N terminal repeat EZ55_01285 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01285 PF00563 EAL domain EZ55_01286 PF00675 Insulinase (Peptidase family M16) EZ55_01286 PF05193 Peptidase M16 inactive domain EZ55_01287 PF00300 Histidine phosphatase superfamily (branch 1) EZ55_01289 PF00571 CBS domain EZ55_01289 PF03471 Transporter associated domain EZ55_01289 PF01595 Cyclin M transmembrane N-terminal domain EZ55_01290 PF01578 Cytochrome C assembly protein EZ55_01291 PF02978 Signal peptide binding domain EZ55_01291 PF00448 SRP54-type protein, GTPase domain EZ55_01291 PF02881 SRP54-type protein, helical bundle domain EZ55_01298 PF00873 AcrB/AcrD/AcrF family EZ55_01299 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_01300 PF00664 ABC transporter transmembrane region EZ55_01300 PF00005 ABC transporter EZ55_01303 PF00886 Ribosomal protein S16 EZ55_01304 PF01782 RimM N-terminal domain EZ55_01304 PF05239 PRC-barrel domain EZ55_01305 PF01746 tRNA (Guanine-1)-methyltransferase EZ55_01306 PF01245 Ribosomal protein L19 EZ55_01307 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_01308 PF03458 UPF0126 domain EZ55_01309 PF00378 Enoyl-CoA hydratase/isomerase EZ55_01310 PF00793 DAHP synthetase I family EZ55_01311 PF02153 Prephenate dehydrogenase EZ55_01311 PF01817 Chorismate mutase type II EZ55_01316 PF17151 Periplasmic sensor domain EZ55_01316 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01317 PF01817 Chorismate mutase type II EZ55_01317 PF00800 Prephenate dehydratase EZ55_01318 PF00072 Response regulator receiver domain EZ55_01319 PF01253 Translation initiation factor SUI1 EZ55_01321 PF00072 Response regulator receiver domain EZ55_01321 PF00486 Transcriptional regulatory protein, C terminal EZ55_01323 PF00563 EAL domain EZ55_01323 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01323 PF03707 Bacterial signalling protein N terminal repeat EZ55_01325 PF00512 His Kinase A (phospho-acceptor) domain EZ55_01325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01327 PF00158 Sigma-54 interaction domain EZ55_01327 PF00072 Response regulator receiver domain EZ55_01330 PF00152 tRNA synthetases class II (D, K and N) EZ55_01330 PF02938 GAD domain EZ55_01330 PF01336 OB-fold nucleic acid binding domain EZ55_01331 PF00293 NUDIX domain EZ55_01332 PF02075 Crossover junction endodeoxyribonuclease RuvC EZ55_01333 PF01330 RuvA N terminal domain EZ55_01333 PF07499 RuvA, C-terminal domain EZ55_01334 PF17864 RuvB AAA lid domain EZ55_01334 PF05496 Holliday junction DNA helicase RuvB P-loop domain EZ55_01334 PF05491 RuvB C-terminal winged helix domain EZ55_01335 PF03061 Thioesterase superfamily EZ55_01336 PF01618 MotA/TolQ/ExbB proton channel family EZ55_01337 PF02472 Biopolymer transport protein ExbD/TolR EZ55_01339 PF07676 WD40-like Beta Propeller Repeat EZ55_01339 PF04052 TolB amino-terminal domain EZ55_01340 PF00691 OmpA family EZ55_01341 PF16331 TolA binding protein trimerisation EZ55_01341 PF13174 Tetratricopeptide repeat EZ55_01345 PF02445 Quinolinate synthetase A protein EZ55_01349 PF02796 Helix-turn-helix domain of resolvase EZ55_01349 PF00239 Resolvase, N terminal domain EZ55_01353 PF01734 Patatin-like phospholipase EZ55_01354 PF08546 Ketopantoate reductase PanE/ApbA C terminal EZ55_01354 PF02558 Ketopantoate reductase PanE/ApbA EZ55_01356 PF00072 Response regulator receiver domain EZ55_01356 PF09308 LuxQ, periplasmic EZ55_01356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01356 PF00512 His Kinase A (phospho-acceptor) domain EZ55_01358 PF02774 Semialdehyde dehydrogenase, dimerisation domain EZ55_01358 PF01118 Semialdehyde dehydrogenase, NAD binding domain EZ55_01359 PF01292 Prokaryotic cytochrome b561 EZ55_01360 PF00563 EAL domain EZ55_01360 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01360 PF03707 Bacterial signalling protein N terminal repeat EZ55_01363 PF01863 Protein of unknown function DUF45 EZ55_01365 PF00873 AcrB/AcrD/AcrF family EZ55_01367 PF00440 Bacterial regulatory proteins, tetR family EZ55_01367 PF08361 MAATS-type transcriptional repressor, C-terminal region EZ55_01368 PF07715 TonB-dependent Receptor Plug Domain EZ55_01368 PF00593 TonB dependent receptor EZ55_01370 PF00873 AcrB/AcrD/AcrF family EZ55_01372 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01374 PF02470 MlaD protein EZ55_01375 PF04403 Paraquat-inducible protein A EZ55_01378 PF05717 IS66 Orf2 like protein EZ55_01379 PF03050 Transposase IS66 family EZ55_01379 PF13817 IS66 C-terminal element EZ55_01379 PF13007 Transposase C of IS166 homeodomain EZ55_01379 PF13005 zinc-finger binding domain of transposase IS66 EZ55_01383 PF07715 TonB-dependent Receptor Plug Domain EZ55_01383 PF00593 TonB dependent receptor EZ55_01389 PF00970 Oxidoreductase FAD-binding domain EZ55_01389 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_01389 PF00175 Oxidoreductase NAD-binding domain EZ55_01392 PF00152 tRNA synthetases class II (D, K and N) EZ55_01392 PF01336 OB-fold nucleic acid binding domain EZ55_01394 PF01699 Sodium/calcium exchanger protein EZ55_01395 PF08443 RimK-like ATP-grasp domain EZ55_01395 PF18030 RimK PreATP-grasp domain EZ55_01399 PF00202 Aminotransferase class-III EZ55_01400 PF04055 Radical SAM superfamily EZ55_01400 PF06968 Biotin and Thiamin Synthesis associated domain EZ55_01401 PF00155 Aminotransferase class I and II EZ55_01402 PF08241 Methyltransferase domain EZ55_01404 PF03575 Peptidase family S51 EZ55_01405 PF01451 Low molecular weight phosphotyrosine protein phosphatase EZ55_01406 PF01032 FecCD transport family EZ55_01407 PF00005 ABC transporter EZ55_01408 PF01474 Class-II DAHP synthetase family EZ55_01409 PF02702 Osmosensitive K+ channel His kinase sensor domain EZ55_01409 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01409 PF00512 His Kinase A (phospho-acceptor) domain EZ55_01409 PF13493 Domain of unknown function (DUF4118) EZ55_01410 PF00072 Response regulator receiver domain EZ55_01410 PF00486 Transcriptional regulatory protein, C terminal EZ55_01411 PF02080 TrkA-C domain EZ55_01411 PF02254 TrkA-N domain EZ55_01412 PF02386 Cation transport protein EZ55_01415 PF00664 ABC transporter transmembrane region EZ55_01415 PF00005 ABC transporter EZ55_01416 PF04055 Radical SAM superfamily EZ55_01416 PF06463 Molybdenum Cofactor Synthesis C EZ55_01418 PF00486 Transcriptional regulatory protein, C terminal EZ55_01418 PF00072 Response regulator receiver domain EZ55_01423 PF00749 tRNA synthetases class I (E and Q), catalytic domain EZ55_01432 PF01207 Dihydrouridine synthase (Dus) EZ55_01435 PF13472 GDSL-like Lipase/Acylhydrolase family EZ55_01436 PF00005 ABC transporter EZ55_01438 PF08338 Domain of unknown function (DUF1731) EZ55_01438 PF01370 NAD dependent epimerase/dehydratase family EZ55_01439 PF02152 Dihydroneopterin aldolase EZ55_01440 PF01594 AI-2E family transporter EZ55_01441 PF08918 PhoQ Sensor EZ55_01441 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01442 PF00072 Response regulator receiver domain EZ55_01442 PF00486 Transcriptional regulatory protein, C terminal EZ55_01445 PF03795 YCII-related domain EZ55_01446 PF00290 Tryptophan synthase alpha chain EZ55_01447 PF00291 Pyridoxal-phosphate dependent enzyme EZ55_01448 PF00218 Indole-3-glycerol phosphate synthase EZ55_01448 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EZ55_01449 PF02885 Glycosyl transferase family, helical bundle domain EZ55_01449 PF00591 Glycosyl transferase family, a/b domain EZ55_01450 PF00117 Glutamine amidotransferase class-I EZ55_01451 PF00425 chorismate binding enzyme EZ55_01451 PF04715 Anthranilate synthase component I, N terminal region EZ55_01452 PF02811 PHP domain EZ55_01453 PF01300 Telomere recombination EZ55_01454 PF02616 Segregation and condensation protein ScpA EZ55_01455 PF04079 Segregation and condensation complex subunit ScpB EZ55_01456 PF00849 RNA pseudouridylate synthase EZ55_01456 PF01479 S4 domain EZ55_01457 PF00248 Aldo/keto reductase family EZ55_01458 PF12464 Maltose acetyltransferase EZ55_01458 PF14602 Hexapeptide repeat of succinyl-transferase EZ55_01460 PF03960 ArsC family EZ55_01461 PF04286 Protein of unknown function (DUF445) EZ55_01462 PF05724 Thiopurine S-methyltransferase (TPMT) EZ55_01463 PF04355 SmpA / OmlA family EZ55_01464 PF02463 RecF/RecN/SMC N terminal domain EZ55_01465 PF00210 Ferritin-like domain EZ55_01466 PF01513 ATP-NAD kinase EZ55_01468 PF00465 Iron-containing alcohol dehydrogenase EZ55_01471 PF00561 alpha/beta hydrolase fold EZ55_01473 PF00593 TonB dependent receptor EZ55_01473 PF07715 TonB-dependent Receptor Plug Domain EZ55_01474 PF00072 Response regulator receiver domain EZ55_01474 PF00196 Bacterial regulatory proteins, luxR family EZ55_01476 PF00072 Response regulator receiver domain EZ55_01476 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01476 PF00672 HAMP domain EZ55_01476 PF01627 Hpt domain EZ55_01476 PF00512 His Kinase A (phospho-acceptor) domain EZ55_01478 PF01025 GrpE EZ55_01479 PF00012 Hsp70 protein EZ55_01480 PF00226 DnaJ domain EZ55_01480 PF01556 DnaJ C terminal domain EZ55_01480 PF00684 DnaJ central domain EZ55_01481 PF01322 Cytochrome C' EZ55_01484 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01484 PF13426 PAS domain EZ55_01484 PF00563 EAL domain EZ55_01485 PF13193 AMP-binding enzyme C-terminal domain EZ55_01485 PF16177 Acetyl-coenzyme A synthetase N-terminus EZ55_01485 PF00501 AMP-binding enzyme EZ55_01487 PF01113 Dihydrodipicolinate reductase, N-terminus EZ55_01487 PF05173 Dihydrodipicolinate reductase, C-terminus EZ55_01488 PF00117 Glutamine amidotransferase class-I EZ55_01488 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EZ55_01489 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EZ55_01489 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EZ55_01489 PF02142 MGS-like domain EZ55_01490 PF01272 Transcription elongation factor, GreA/GreB, C-term EZ55_01490 PF03449 Transcription elongation factor, N-terminal EZ55_01491 PF12729 Four helix bundle sensory module for signal transduction EZ55_01491 PF00672 HAMP domain EZ55_01491 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_01495 PF00011 Hsp20/alpha crystallin family EZ55_01496 PF00871 Acetokinase family EZ55_01497 PF07085 DRTGG domain EZ55_01497 PF01515 Phosphate acetyl/butaryl transferase EZ55_01498 PF01979 Amidohydrolase family EZ55_01499 PF00795 Carbon-nitrogen hydrolase EZ55_01500 PF00571 CBS domain EZ55_01500 PF03471 Transporter associated domain EZ55_01501 PF02130 Uncharacterized protein family UPF0054 EZ55_01502 PF02562 PhoH-like protein EZ55_01503 PF01938 TRAM domain EZ55_01503 PF04055 Radical SAM superfamily EZ55_01503 PF00919 Uncharacterized protein family UPF0004 EZ55_01504 PF01494 FAD binding domain EZ55_01509 PF02371 Transposase IS116/IS110/IS902 family EZ55_01509 PF01548 Transposase EZ55_01513 PF07715 TonB-dependent Receptor Plug Domain EZ55_01513 PF00593 TonB dependent receptor EZ55_01514 PF03061 Thioesterase superfamily EZ55_01515 PF01613 Flavin reductase like domain EZ55_01516 PF01638 HxlR-like helix-turn-helix EZ55_01519 PF01235 Sodium:alanine symporter family EZ55_01528 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EZ55_01529 PF06071 Protein of unknown function (DUF933) EZ55_01529 PF01926 50S ribosome-binding GTPase EZ55_01530 PF01195 Peptidyl-tRNA hydrolase EZ55_01531 PF14693 Ribosomal protein TL5, C-terminal domain EZ55_01531 PF01386 Ribosomal L25p family EZ55_01532 PF00107 Zinc-binding dehydrogenase EZ55_01532 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_01534 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EZ55_01534 PF14572 Phosphoribosyl synthetase-associated domain EZ55_01536 PF08544 GHMP kinases C terminal EZ55_01536 PF00288 GHMP kinases N terminal domain EZ55_01537 PF03550 Outer membrane lipoprotein LolB EZ55_01538 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EZ55_01538 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EZ55_01538 PF01488 Shikimate / quinate 5-dehydrogenase EZ55_01539 PF03462 PCRF domain EZ55_01539 PF00472 RF-1 domain EZ55_01540 PF17827 PrmC N-terminal domain EZ55_01540 PF13847 Methyltransferase domain EZ55_01541 PF11849 Domain of unknown function (DUF3369) EZ55_01542 PF04247 Invasion gene expression up-regulator, SirB EZ55_01543 PF00793 DAHP synthetase I family EZ55_01545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01545 PF03466 LysR substrate binding domain EZ55_01547 PF04241 Protein of unknown function (DUF423) EZ55_01548 PF01728 FtsJ-like methyltransferase EZ55_01548 PF18125 RlmM ferredoxin-like domain EZ55_01549 PF03144 Elongation factor Tu domain 2 EZ55_01549 PF14492 Elongation Factor G, domain II EZ55_01549 PF03764 Elongation factor G, domain IV EZ55_01549 PF00009 Elongation factor Tu GTP binding domain EZ55_01549 PF00679 Elongation factor G C-terminus EZ55_01550 PF02560 Cyanate lyase C-terminal domain EZ55_01551 PF00069 Protein kinase domain EZ55_01552 PF01226 Formate/nitrite transporter EZ55_01553 PF11992 Domain of unknown function (DUF3488) EZ55_01553 PF13559 Domain of unknown function (DUF4129) EZ55_01553 PF01841 Transglutaminase-like superfamily EZ55_01555 PF17863 AAA lid domain EZ55_01555 PF07726 ATPase family associated with various cellular activities (AAA) EZ55_01557 PF17206 SeqA protein N-terminal domain EZ55_01557 PF03925 SeqA protein C-terminal domain EZ55_01558 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EZ55_01558 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EZ55_01558 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EZ55_01558 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EZ55_01559 PF00343 Carbohydrate phosphorylase EZ55_01561 PF00563 EAL domain EZ55_01561 PF03707 Bacterial signalling protein N terminal repeat EZ55_01561 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01562 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EZ55_01564 PF01906 Putative heavy-metal-binding EZ55_01565 PF00375 Sodium:dicarboxylate symporter family EZ55_01568 PF01546 Peptidase family M20/M25/M40 EZ55_01568 PF07687 Peptidase dimerisation domain EZ55_01569 PF03960 ArsC family EZ55_01574 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EZ55_01575 PF04209 homogentisate 1,2-dioxygenase EZ55_01579 PF03707 Bacterial signalling protein N terminal repeat EZ55_01579 PF00563 EAL domain EZ55_01579 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01580 PF03707 Bacterial signalling protein N terminal repeat EZ55_01580 PF00563 EAL domain EZ55_01580 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01581 PF12706 Beta-lactamase superfamily domain EZ55_01582 PF00873 AcrB/AcrD/AcrF family EZ55_01584 PF02254 TrkA-N domain EZ55_01584 PF00999 Sodium/hydrogen exchanger family EZ55_01585 PF02525 Flavodoxin-like fold EZ55_01588 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EZ55_01589 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_01589 PF01799 [2Fe-2S] binding domain EZ55_01590 PF01638 HxlR-like helix-turn-helix EZ55_01592 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01592 PF00563 EAL domain EZ55_01592 PF13426 PAS domain EZ55_01592 PF08448 PAS fold EZ55_01592 PF08447 PAS fold EZ55_01592 PF05231 MASE1 EZ55_01594 PF01979 Amidohydrolase family EZ55_01595 PF00576 HIUase/Transthyretin family EZ55_01598 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EZ55_01598 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EZ55_01599 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EZ55_01599 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EZ55_01599 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_01599 PF01799 [2Fe-2S] binding domain EZ55_01600 PF00440 Bacterial regulatory proteins, tetR family EZ55_01600 PF08362 YcdC-like protein, C-terminal region EZ55_01602 PF00860 Permease family EZ55_01603 PF00962 Adenosine/AMP deaminase EZ55_01605 PF03707 Bacterial signalling protein N terminal repeat EZ55_01605 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01605 PF00563 EAL domain EZ55_01606 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01606 PF00072 Response regulator receiver domain EZ55_01607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01607 PF00512 His Kinase A (phospho-acceptor) domain EZ55_01607 PF09308 LuxQ, periplasmic EZ55_01607 PF00072 Response regulator receiver domain EZ55_01609 PF07715 TonB-dependent Receptor Plug Domain EZ55_01609 PF00593 TonB dependent receptor EZ55_01610 PF00860 Permease family EZ55_01611 PF00962 Adenosine/AMP deaminase EZ55_01613 PF01546 Peptidase family M20/M25/M40 EZ55_01613 PF07687 Peptidase dimerisation domain EZ55_01614 PF00266 Aminotransferase class-V EZ55_01615 PF01925 Sulfite exporter TauE/SafE EZ55_01617 PF01425 Amidase EZ55_01624 PF03881 Fructosamine kinase EZ55_01625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EZ55_01625 PF03129 Anticodon binding domain EZ55_01625 PF02824 TGS domain EZ55_01625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EZ55_01626 PF05198 Translation initiation factor IF-3, N-terminal domain EZ55_01626 PF00707 Translation initiation factor IF-3, C-terminal domain EZ55_01627 PF01632 Ribosomal protein L35 EZ55_01628 PF00453 Ribosomal protein L20 EZ55_01629 PF01050 Mannose-6-phosphate isomerase EZ55_01629 PF00483 Nucleotidyl transferase EZ55_01630 PF02397 Bacterial sugar transferase EZ55_01633 PF02563 Polysaccharide biosynthesis/export protein EZ55_01633 PF10531 SLBB domain EZ55_01633 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EZ55_01634 PF13614 AAA domain EZ55_01640 PF00563 EAL domain EZ55_01640 PF03707 Bacterial signalling protein N terminal repeat EZ55_01640 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01642 PF00534 Glycosyl transferases group 1 EZ55_01642 PF13439 Glycosyltransferase Family 4 EZ55_01647 PF00535 Glycosyl transferase family 2 EZ55_01647 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 EZ55_01651 PF04230 Polysaccharide pyruvyl transferase EZ55_01653 PF13439 Glycosyltransferase Family 4 EZ55_01653 PF00534 Glycosyl transferases group 1 EZ55_01655 PF00535 Glycosyl transferase family 2 EZ55_01656 PF01757 Acyltransferase family EZ55_01657 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_01661 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EZ55_01661 PF01409 tRNA synthetases class II core domain (F) EZ55_01662 PF03483 B3/4 domain EZ55_01662 PF03484 tRNA synthetase B5 domain EZ55_01662 PF03147 Ferredoxin-fold anticodon binding domain EZ55_01662 PF01588 Putative tRNA binding domain EZ55_01662 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EZ55_01663 PF00216 Bacterial DNA-binding protein EZ55_01666 PF04073 Aminoacyl-tRNA editing domain EZ55_01667 PF01804 Penicillin amidase EZ55_01668 PF00933 Glycosyl hydrolase family 3 N terminal domain EZ55_01669 PF01923 Cobalamin adenosyltransferase EZ55_01671 PF17757 UvrB interaction domain EZ55_01671 PF03461 TRCF domain EZ55_01671 PF00270 DEAD/DEAH box helicase EZ55_01671 PF02559 CarD-like/TRCF domain EZ55_01671 PF00271 Helicase conserved C-terminal domain EZ55_01673 PF02687 FtsX-like permease family EZ55_01673 PF12704 MacB-like periplasmic core domain EZ55_01677 PF03372 Endonuclease/Exonuclease/phosphatase family EZ55_01684 PF07690 Major Facilitator Superfamily EZ55_01686 PF00483 Nucleotidyl transferase EZ55_01690 PF00682 HMGL-like EZ55_01691 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EZ55_01691 PF00364 Biotin-requiring enzyme EZ55_01691 PF18140 Propionyl-coenzyme A carboxylase BT domain EZ55_01691 PF02785 Biotin carboxylase C-terminal domain EZ55_01691 PF00289 Biotin carboxylase, N-terminal domain EZ55_01692 PF00378 Enoyl-CoA hydratase/isomerase EZ55_01693 PF01039 Carboxyl transferase domain EZ55_01694 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_01694 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_01694 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_01695 PF13411 MerR HTH family regulatory protein EZ55_01696 PF00108 Thiolase, N-terminal domain EZ55_01696 PF02803 Thiolase, C-terminal domain EZ55_01698 PF00266 Aminotransferase class-V EZ55_01701 PF08411 Exonuclease C-terminal EZ55_01701 PF00929 Exonuclease EZ55_01702 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EZ55_01702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01702 PF00512 His Kinase A (phospho-acceptor) domain EZ55_01702 PF01627 Hpt domain EZ55_01702 PF00672 HAMP domain EZ55_01702 PF00072 Response regulator receiver domain EZ55_01703 PF01112 Asparaginase EZ55_01705 PF02333 Phytase EZ55_01708 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EZ55_01708 PF12833 Helix-turn-helix domain EZ55_01710 PF00270 DEAD/DEAH box helicase EZ55_01710 PF11898 Domain of unknown function (DUF3418) EZ55_01710 PF04408 Helicase associated domain (HA2) EZ55_01710 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EZ55_01710 PF00271 Helicase conserved C-terminal domain EZ55_01713 PF10672 S-adenosylmethionine-dependent methyltransferase EZ55_01713 PF17785 PUA-like domain EZ55_01714 PF02801 Beta-ketoacyl synthase, C-terminal domain EZ55_01714 PF00550 Phosphopantetheine attachment site EZ55_01714 PF08659 KR domain EZ55_01714 PF14765 Polyketide synthase dehydratase EZ55_01714 PF16197 Ketoacyl-synthetase C-terminal extension EZ55_01714 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_01714 PF00698 Acyl transferase domain EZ55_01714 PF00109 Beta-ketoacyl synthase, N-terminal domain EZ55_01715 PF00075 RNase H EZ55_01716 PF00929 Exonuclease EZ55_01722 PF00563 EAL domain EZ55_01722 PF12792 CSS motif domain associated with EAL EZ55_01723 PF00005 ABC transporter EZ55_01724 PF02687 FtsX-like permease family EZ55_01724 PF12704 MacB-like periplasmic core domain EZ55_01725 PF02371 Transposase IS116/IS110/IS902 family EZ55_01725 PF01548 Transposase EZ55_01726 PF00375 Sodium:dicarboxylate symporter family EZ55_01728 PF04996 Succinylarginine dihydrolase EZ55_01729 PF01131 DNA topoisomerase EZ55_01729 PF01751 Toprim domain EZ55_01729 PF01396 Topoisomerase DNA binding C4 zinc finger EZ55_01729 PF08272 Topoisomerase I zinc-ribbon-like EZ55_01730 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) EZ55_01732 PF03466 LysR substrate binding domain EZ55_01732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01733 PF12804 MobA-like NTP transferase domain EZ55_01734 PF02634 FdhD/NarQ family EZ55_01735 PF00384 Molybdopterin oxidoreductase EZ55_01737 PF02798 Glutathione S-transferase, N-terminal domain EZ55_01739 PF03466 LysR substrate binding domain EZ55_01739 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01740 PF13673 Acetyltransferase (GNAT) domain EZ55_01741 PF13419 Haloacid dehalogenase-like hydrolase EZ55_01742 PF00486 Transcriptional regulatory protein, C terminal EZ55_01742 PF00072 Response regulator receiver domain EZ55_01743 PF00989 PAS fold EZ55_01743 PF00512 His Kinase A (phospho-acceptor) domain EZ55_01743 PF00672 HAMP domain EZ55_01743 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01743 PF18698 Histidine kinase sensor domain EZ55_01745 PF00575 S1 RNA binding domain EZ55_01745 PF10150 Ribonuclease E/G family EZ55_01745 PF12111 Polyribonucleotide phosphorylase C terminal EZ55_01747 PF01479 S4 domain EZ55_01747 PF00849 RNA pseudouridylate synthase EZ55_01748 PF13419 Haloacid dehalogenase-like hydrolase EZ55_01749 PF02545 Maf-like protein EZ55_01750 PF02620 Large ribosomal RNA subunit accumulation protein YceD EZ55_01751 PF01783 Ribosomal L32p protein family EZ55_01752 PF02504 Fatty acid synthesis protein EZ55_01753 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EZ55_01753 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EZ55_01754 PF00698 Acyl transferase domain EZ55_01756 PF00550 Phosphopantetheine attachment site EZ55_01757 PF00109 Beta-ketoacyl synthase, N-terminal domain EZ55_01757 PF02801 Beta-ketoacyl synthase, C-terminal domain EZ55_01758 PF01063 Amino-transferase class IV EZ55_01759 PF02618 YceG-like family EZ55_01760 PF02223 Thymidylate kinase EZ55_01761 PF09115 DNA polymerase III, delta subunit, C terminal EZ55_01762 PF01026 TatD related DNase EZ55_01763 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EZ55_01763 PF01243 Pyridoxamine 5'-phosphate oxidase EZ55_01764 PF13460 NAD(P)H-binding EZ55_01765 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01765 PF08448 PAS fold EZ55_01768 PF01548 Transposase EZ55_01768 PF02371 Transposase IS116/IS110/IS902 family EZ55_01771 PF00561 alpha/beta hydrolase fold EZ55_01772 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EZ55_01772 PF00378 Enoyl-CoA hydratase/isomerase EZ55_01772 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EZ55_01773 PF02803 Thiolase, C-terminal domain EZ55_01773 PF00108 Thiolase, N-terminal domain EZ55_01774 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_01774 PF12806 Acetyl-CoA dehydrogenase C-terminal like EZ55_01774 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_01774 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_01775 PF00561 alpha/beta hydrolase fold EZ55_01778 PF04198 Putative sugar-binding domain EZ55_01779 PF13419 Haloacid dehalogenase-like hydrolase EZ55_01781 PF08125 Mannitol dehydrogenase C-terminal domain EZ55_01781 PF01232 Mannitol dehydrogenase Rossmann domain EZ55_01784 PF01979 Amidohydrolase family EZ55_01785 PF07683 Cobalamin synthesis protein cobW C-terminal domain EZ55_01785 PF02492 CobW/HypB/UreG, nucleotide-binding domain EZ55_01786 PF02913 FAD linked oxidases, C-terminal domain EZ55_01786 PF13183 4Fe-4S dicluster domain EZ55_01786 PF01565 FAD binding domain EZ55_01788 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01788 PF03466 LysR substrate binding domain EZ55_01789 PF01575 MaoC like domain EZ55_01791 PF00924 Mechanosensitive ion channel EZ55_01792 PF00593 TonB dependent receptor EZ55_01792 PF07715 TonB-dependent Receptor Plug Domain EZ55_01793 PF01329 Pterin 4 alpha carbinolamine dehydratase EZ55_01797 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_01797 PF00512 His Kinase A (phospho-acceptor) domain EZ55_01797 PF01627 Hpt domain EZ55_01797 PF00072 Response regulator receiver domain EZ55_01798 PF00072 Response regulator receiver domain EZ55_01799 PF02576 RimP N-terminal domain EZ55_01799 PF17384 RimP C-terminal SH3 domain EZ55_01800 PF00575 S1 RNA binding domain EZ55_01800 PF13184 NusA-like KH domain EZ55_01800 PF08529 NusA N-terminal domain EZ55_01801 PF00009 Elongation factor Tu GTP binding domain EZ55_01801 PF11987 Translation-initiation factor 2 EZ55_01801 PF04760 Translation initiation factor IF-2, N-terminal region EZ55_01801 PF08364 Bacterial translation initiation factor IF-2 associated region EZ55_01802 PF02033 Ribosome-binding factor A EZ55_01803 PF01509 TruB family pseudouridylate synthase (N terminal domain) EZ55_01803 PF09157 Pseudouridine synthase II TruB, C-terminal EZ55_01803 PF16198 tRNA pseudouridylate synthase B C-terminal domain EZ55_01805 PF00312 Ribosomal protein S15 EZ55_01806 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01806 PF00563 EAL domain EZ55_01806 PF03707 Bacterial signalling protein N terminal repeat EZ55_01807 PF01479 S4 domain EZ55_01807 PF00849 RNA pseudouridylate synthase EZ55_01809 PF00583 Acetyltransferase (GNAT) family EZ55_01809 PF00795 Carbon-nitrogen hydrolase EZ55_01814 PF10417 C-terminal domain of 1-Cys peroxiredoxin EZ55_01814 PF00578 AhpC/TSA family EZ55_01815 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_01815 PF13192 Thioredoxin domain EZ55_01816 PF07715 TonB-dependent Receptor Plug Domain EZ55_01816 PF00593 TonB dependent receptor EZ55_01823 PF04055 Radical SAM superfamily EZ55_01823 PF08497 Radical SAM N-terminal EZ55_01823 PF11842 Domain of unknown function (DUF3362) EZ55_01826 PF07715 TonB-dependent Receptor Plug Domain EZ55_01826 PF00593 TonB dependent receptor EZ55_01827 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EZ55_01827 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_01829 PF13416 Bacterial extracellular solute-binding protein EZ55_01831 PF00005 ABC transporter EZ55_01832 PF01066 CDP-alcohol phosphatidyltransferase EZ55_01834 PF01223 DNA/RNA non-specific endonuclease EZ55_01835 PF00107 Zinc-binding dehydrogenase EZ55_01835 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_01842 PF03466 LysR substrate binding domain EZ55_01842 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01843 PF02525 Flavodoxin-like fold EZ55_01846 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_01846 PF03466 LysR substrate binding domain EZ55_01848 PF07715 TonB-dependent Receptor Plug Domain EZ55_01848 PF00593 TonB dependent receptor EZ55_01851 PF00005 ABC transporter EZ55_01853 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EZ55_01854 PF01668 SmpB protein EZ55_01855 PF03364 Polyketide cyclase / dehydrase and lipid transport EZ55_01856 PF03658 RnfH family Ubiquitin EZ55_01858 PF02028 BCCT, betaine/carnitine/choline family transporter EZ55_01859 PF07715 TonB-dependent Receptor Plug Domain EZ55_01859 PF00593 TonB dependent receptor EZ55_01860 PF13181 Tetratricopeptide repeat EZ55_01863 PF03618 Kinase/pyrophosphorylase EZ55_01864 PF00391 PEP-utilising enzyme, mobile domain EZ55_01864 PF02896 PEP-utilising enzyme, TIM barrel domain EZ55_01864 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EZ55_01867 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EZ55_01868 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_01868 PF01799 [2Fe-2S] binding domain EZ55_01872 PF08007 Cupin superfamily protein EZ55_01873 PF00211 Adenylate and Guanylate cyclase catalytic domain EZ55_01874 PF00206 Lyase EZ55_01874 PF08328 Adenylosuccinate lyase C-terminal EZ55_01875 PF04356 Protein of unknown function (DUF489) EZ55_01877 PF00849 RNA pseudouridylate synthase EZ55_01878 PF03971 Monomeric isocitrate dehydrogenase EZ55_01880 PF00313 'Cold-shock' DNA-binding domain EZ55_01881 PF02617 ATP-dependent Clp protease adaptor protein ClpS EZ55_01882 PF10431 C-terminal, D2-small domain, of ClpB protein EZ55_01882 PF02861 Clp amino terminal domain, pathogenicity island component EZ55_01882 PF17871 AAA lid domain EZ55_01882 PF00004 ATPase family associated with various cellular activities (AAA) EZ55_01882 PF07724 AAA domain (Cdc48 subfamily) EZ55_01883 PF01176 Translation initiation factor 1A / IF-1 EZ55_01884 PF04377 Arginine-tRNA-protein transferase, C terminus EZ55_01884 PF04376 Arginine-tRNA-protein transferase, N terminus EZ55_01885 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EZ55_01886 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_01887 PF04217 Protein of unknown function, DUF412 EZ55_01888 PF01343 Peptidase family S49 EZ55_01891 PF00881 Nitroreductase family EZ55_01893 PF00710 Asparaginase, N-terminal EZ55_01893 PF17763 Glutaminase/Asparaginase C-terminal domain EZ55_01894 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EZ55_01894 PF04055 Radical SAM superfamily EZ55_01895 PF03099 Biotin/lipoate A/B protein ligase family EZ55_01896 PF04359 Protein of unknown function (DUF493) EZ55_01897 PF07943 Penicillin-binding protein 5, C-terminal domain EZ55_01897 PF00768 D-alanyl-D-alanine carboxypeptidase EZ55_01898 PF05036 Sporulation related domain EZ55_01898 PF03330 Lytic transglycolase EZ55_01899 PF01098 Cell cycle protein EZ55_01900 PF03717 Penicillin-binding Protein dimerisation domain EZ55_01900 PF00905 Penicillin binding protein transpeptidase domain EZ55_01901 PF02590 Predicted SPOUT methyltransferase EZ55_01903 PF01467 Cytidylyltransferase-like EZ55_01904 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EZ55_01904 PF06144 DNA polymerase III, delta subunit EZ55_01905 PF04390 Lipopolysaccharide-assembly EZ55_01906 PF13603 Leucyl-tRNA synthetase, Domain 2 EZ55_01906 PF00133 tRNA synthetases class I (I, L, M and V) EZ55_01906 PF08264 Anticodon-binding domain of tRNA EZ55_01908 PF13654 AAA domain EZ55_01908 PF05362 Lon protease (S16) C-terminal proteolytic domain EZ55_01911 PF00106 short chain dehydrogenase EZ55_01912 PF01985 CRS1 / YhbY (CRM) domain EZ55_01913 PF01728 FtsJ-like methyltransferase EZ55_01914 PF06480 FtsH Extracellular EZ55_01914 PF00004 ATPase family associated with various cellular activities (AAA) EZ55_01914 PF17862 AAA+ lid domain EZ55_01914 PF01434 Peptidase family M41 EZ55_01915 PF00809 Pterin binding enzyme EZ55_01916 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EZ55_01916 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EZ55_01916 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EZ55_01916 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EZ55_01917 PF00121 Triosephosphate isomerase EZ55_01918 PF03840 Preprotein translocase SecG subunit EZ55_01920 PF00563 EAL domain EZ55_01920 PF00990 Diguanylate cyclase, GGDEF domain EZ55_01920 PF03707 Bacterial signalling protein N terminal repeat EZ55_01921 PF01679 Proteolipid membrane potential modulator EZ55_01923 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EZ55_01923 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EZ55_01924 PF00781 Diacylglycerol kinase catalytic domain EZ55_01924 PF02142 MGS-like domain EZ55_01930 PF00474 Sodium:solute symporter family EZ55_01931 PF00696 Amino acid kinase family EZ55_01932 PF00171 Aldehyde dehydrogenase family EZ55_01935 PF00013 KH domain EZ55_01935 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EZ55_01935 PF01138 3' exoribonuclease family, domain 1 EZ55_01935 PF03725 3' exoribonuclease family, domain 2 EZ55_01935 PF00575 S1 RNA binding domain EZ55_01943 PF05717 IS66 Orf2 like protein EZ55_01945 PF00872 Transposase, Mutator family EZ55_01957 PF00144 Beta-lactamase EZ55_01966 PF07690 Major Facilitator Superfamily EZ55_01969 PF03544 Gram-negative bacterial TonB protein C-terminal EZ55_01973 PF07719 Tetratricopeptide repeat EZ55_01973 PF13181 Tetratricopeptide repeat EZ55_01976 PF06470 SMC proteins Flexible Hinge Domain EZ55_01976 PF02463 RecF/RecN/SMC N terminal domain EZ55_01977 PF04354 ZipA, C-terminal FtsZ-binding domain EZ55_01978 PF00533 BRCA1 C Terminus (BRCT) domain EZ55_01978 PF01653 NAD-dependent DNA ligase adenylation domain EZ55_01978 PF03120 NAD-dependent DNA ligase OB-fold domain EZ55_01978 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EZ55_01978 PF12826 Helix-hairpin-helix motif EZ55_01981 PF00664 ABC transporter transmembrane region EZ55_01981 PF00005 ABC transporter EZ55_01982 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EZ55_01983 PF03966 Trm112p-like protein EZ55_01984 PF02348 Cytidylyltransferase EZ55_01985 PF00106 short chain dehydrogenase EZ55_01987 PF04055 Radical SAM superfamily EZ55_01987 PF18693 TRAM domain EZ55_01987 PF00919 Uncharacterized protein family UPF0004 EZ55_01990 PF00899 ThiF family EZ55_01991 PF13409 Glutathione S-transferase, N-terminal domain EZ55_01992 PF02678 Pirin EZ55_01992 PF05726 Pirin C-terminal cupin domain EZ55_01994 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EZ55_01994 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EZ55_01994 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EZ55_01994 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EZ55_01997 PF00285 Citrate synthase, C-terminal domain EZ55_01998 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EZ55_01999 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EZ55_02000 PF00890 FAD binding domain EZ55_02000 PF02910 Fumarate reductase flavoprotein C-term EZ55_02001 PF13085 2Fe-2S iron-sulfur cluster binding domain EZ55_02002 PF16078 2-oxoglutarate dehydrogenase N-terminus EZ55_02002 PF00676 Dehydrogenase E1 component EZ55_02002 PF16870 2-oxoglutarate dehydrogenase C-terminal EZ55_02002 PF02779 Transketolase, pyrimidine binding domain EZ55_02003 PF00364 Biotin-requiring enzyme EZ55_02003 PF02817 e3 binding domain EZ55_02003 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EZ55_02004 PF00549 CoA-ligase EZ55_02004 PF08442 ATP-grasp domain EZ55_02005 PF02629 CoA binding domain EZ55_02005 PF00549 CoA-ligase EZ55_02007 PF04820 Tryptophan halogenase EZ55_02009 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EZ55_02009 PF11852 Domain of unknown function (DUF3372) EZ55_02009 PF03714 Bacterial pullanase-associated domain EZ55_02009 PF18494 Pullulanase Ins domain EZ55_02009 PF17967 Pullulanase N2 domain EZ55_02010 PF01734 Patatin-like phospholipase EZ55_02013 PF16657 Maltogenic Amylase, C-terminal domain EZ55_02013 PF02903 Alpha amylase, N-terminal ig-like domain EZ55_02013 PF00128 Alpha amylase, catalytic domain EZ55_02014 PF00128 Alpha amylase, catalytic domain EZ55_02014 PF10438 Cyclo-malto-dextrinase C-terminal domain EZ55_02014 PF09087 Cyclomaltodextrinase, N-terminal EZ55_02016 PF00128 Alpha amylase, catalytic domain EZ55_02016 PF03423 Carbohydrate binding domain (family 25) EZ55_02016 PF01373 Glycosyl hydrolase family 14 EZ55_02017 PF00356 Bacterial regulatory proteins, lacI family EZ55_02018 PF00749 tRNA synthetases class I (E and Q), catalytic domain EZ55_02018 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EZ55_02019 PF00106 short chain dehydrogenase EZ55_02020 PF12262 Bacterial virulence factor lipase N-terminal EZ55_02021 PF01804 Penicillin amidase EZ55_02022 PF08496 Peptidase family S49 N-terminal EZ55_02022 PF01343 Peptidase family S49 EZ55_02025 PF01784 NIF3 (NGG1p interacting factor 3) EZ55_02027 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EZ55_02027 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EZ55_02028 PF00255 Glutathione peroxidase EZ55_02029 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EZ55_02029 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EZ55_02031 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_02031 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_02031 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_02032 PF00378 Enoyl-CoA hydratase/isomerase EZ55_02033 PF13847 Methyltransferase domain EZ55_02034 PF00884 Sulfatase EZ55_02034 PF11893 Domain of unknown function (DUF3413) EZ55_02035 PF07208 Protein of unknown function (DUF1414) EZ55_02036 PF04245 37-kD nucleoid-associated bacterial protein EZ55_02038 PF01551 Peptidase family M23 EZ55_02038 PF01464 Transglycosylase SLT domain EZ55_02038 PF10145 Phage-related minor tail protein EZ55_02042 PF07694 5TMR of 5TMR-LYT EZ55_02042 PF06580 Histidine kinase EZ55_02043 PF04397 LytTr DNA-binding domain EZ55_02043 PF00072 Response regulator receiver domain EZ55_02044 PF00365 Phosphofructokinase EZ55_02047 PF00872 Transposase, Mutator family EZ55_02049 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_02049 PF00512 His Kinase A (phospho-acceptor) domain EZ55_02049 PF01627 Hpt domain EZ55_02049 PF00989 PAS fold EZ55_02049 PF00072 Response regulator receiver domain EZ55_02049 PF00497 Bacterial extracellular solute-binding proteins, family 3 EZ55_02051 PF17773 UPF0176 acylphosphatase like domain EZ55_02051 PF00581 Rhodanese-like domain EZ55_02053 PF13936 Helix-turn-helix domain EZ55_02053 PF00665 Integrase core domain EZ55_02055 PF14765 Polyketide synthase dehydratase EZ55_02055 PF00550 Phosphopantetheine attachment site EZ55_02055 PF08659 KR domain EZ55_02055 PF02801 Beta-ketoacyl synthase, C-terminal domain EZ55_02055 PF00109 Beta-ketoacyl synthase, N-terminal domain EZ55_02055 PF08990 Erythronolide synthase docking EZ55_02055 PF09277 Erythronolide synthase, docking EZ55_02055 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_02055 PF00698 Acyl transferase domain EZ55_02055 PF16197 Ketoacyl-synthetase C-terminal extension EZ55_02056 PF14765 Polyketide synthase dehydratase EZ55_02056 PF08659 KR domain EZ55_02056 PF00698 Acyl transferase domain EZ55_02056 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_02056 PF00550 Phosphopantetheine attachment site EZ55_02057 PF00106 short chain dehydrogenase EZ55_02058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02058 PF03466 LysR substrate binding domain EZ55_02059 PF00579 tRNA synthetases class I (W and Y) EZ55_02061 PF00271 Helicase conserved C-terminal domain EZ55_02061 PF00270 DEAD/DEAH box helicase EZ55_02062 PF01144 Coenzyme A transferase EZ55_02063 PF01144 Coenzyme A transferase EZ55_02064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02064 PF03466 LysR substrate binding domain EZ55_02067 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02067 PF03466 LysR substrate binding domain EZ55_02068 PF03313 Serine dehydratase alpha chain EZ55_02068 PF03315 Serine dehydratase beta chain EZ55_02069 PF00293 NUDIX domain EZ55_02070 PF00425 chorismate binding enzyme EZ55_02070 PF04715 Anthranilate synthase component I, N terminal region EZ55_02072 PF02646 RmuC family EZ55_02073 PF13860 FlgD Ig-like domain EZ55_02073 PF05922 Peptidase inhibitor I9 EZ55_02073 PF02225 PA domain EZ55_02073 PF00082 Subtilase family EZ55_02074 PF00676 Dehydrogenase E1 component EZ55_02075 PF02780 Transketolase, C-terminal domain EZ55_02075 PF02779 Transketolase, pyrimidine binding domain EZ55_02076 PF00364 Biotin-requiring enzyme EZ55_02076 PF02817 e3 binding domain EZ55_02076 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EZ55_02077 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EZ55_02078 PF00069 Protein kinase domain EZ55_02080 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_02082 PF00266 Aminotransferase class-V EZ55_02084 PF13185 GAF domain EZ55_02086 PF04352 ProQ/FINO family EZ55_02086 PF17516 ProQ C-terminal domain EZ55_02087 PF11818 C-terminal domain of tail specific protease (DUF3340) EZ55_02087 PF00595 PDZ domain EZ55_02087 PF03572 Peptidase family S41 EZ55_02087 PF17804 Tail specific protease N-terminal domain EZ55_02088 PF00209 Sodium:neurotransmitter symporter family EZ55_02089 PF03553 Na+/H+ antiporter family EZ55_02090 PF11940 Domain of unknown function (DUF3458) Ig-like fold EZ55_02090 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EZ55_02090 PF01433 Peptidase family M1 domain EZ55_02093 PF07044 Protein of unknown function (DUF1329) EZ55_02096 PF05088 Bacterial NAD-glutamate dehydrogenase EZ55_02097 PF01180 Dihydroorotate dehydrogenase EZ55_02098 PF01170 Putative RNA methylase family UPF0020 EZ55_02098 PF02926 THUMP domain EZ55_02098 PF10672 S-adenosylmethionine-dependent methyltransferase EZ55_02100 PF00005 ABC transporter EZ55_02100 PF16326 ABC transporter C-terminal domain EZ55_02100 PF12848 ABC transporter EZ55_02102 PF04957 Ribosome modulation factor EZ55_02103 PF07977 FabA-like domain EZ55_02105 PF00875 DNA photolyase EZ55_02105 PF03441 FAD binding domain of DNA photolyase EZ55_02106 PF00875 DNA photolyase EZ55_02106 PF03441 FAD binding domain of DNA photolyase EZ55_02107 PF00875 DNA photolyase EZ55_02107 PF03441 FAD binding domain of DNA photolyase EZ55_02108 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EZ55_02114 PF02417 Chromate transporter EZ55_02115 PF09828 Chromate resistance exported protein EZ55_02116 PF01526 Tn3 transposase DDE domain EZ55_02116 PF13700 Domain of unknown function (DUF4158) EZ55_02120 PF00753 Metallo-beta-lactamase superfamily EZ55_02120 PF16123 Hydroxyacylglutathione hydrolase C-terminus EZ55_02121 PF00589 Phage integrase family EZ55_02121 PF02899 Phage integrase, N-terminal SAM-like domain EZ55_02123 PF01219 Prokaryotic diacylglycerol kinase EZ55_02124 PF00582 Universal stress protein family EZ55_02126 PF01645 Conserved region in glutamate synthase EZ55_02127 PF00999 Sodium/hydrogen exchanger family EZ55_02128 PF00210 Ferritin-like domain EZ55_02129 PF00210 Ferritin-like domain EZ55_02131 PF00115 Cytochrome C and Quinol oxidase polypeptide I EZ55_02134 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EZ55_02134 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EZ55_02136 PF00403 Heavy-metal-associated domain EZ55_02139 PF13545 Crp-like helix-turn-helix domain EZ55_02139 PF00027 Cyclic nucleotide-binding domain EZ55_02140 PF01609 Transposase DDE domain EZ55_02140 PF13006 Insertion element 4 transposase N-terminal EZ55_02141 PF00582 Universal stress protein family EZ55_02142 PF01171 PP-loop family EZ55_02143 PF01734 Patatin-like phospholipase EZ55_02147 PF01810 LysE type translocator EZ55_02148 PF02146 Sir2 family EZ55_02149 PF00581 Rhodanese-like domain EZ55_02150 PF08534 Redoxin EZ55_02151 PF03942 DTW domain EZ55_02155 PF01066 CDP-alcohol phosphatidyltransferase EZ55_02156 PF08459 UvrC Helix-hairpin-helix N-terminal EZ55_02156 PF02151 UvrB/uvrC motif EZ55_02156 PF01541 GIY-YIG catalytic domain EZ55_02157 PF00196 Bacterial regulatory proteins, luxR family EZ55_02157 PF00072 Response regulator receiver domain EZ55_02158 PF02678 Pirin EZ55_02158 PF17954 Quercetinase C-terminal cupin domain EZ55_02160 PF12867 DinB superfamily EZ55_02160 PF03781 Sulfatase-modifying factor enzyme 1 EZ55_02164 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EZ55_02165 PF07681 DoxX EZ55_02166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02166 PF03466 LysR substrate binding domain EZ55_02169 PF01027 Inhibitor of apoptosis-promoting Bax1 EZ55_02170 PF02635 DsrE/DsrF-like family EZ55_02173 PF04358 DsrC like protein EZ55_02176 PF00593 TonB dependent receptor EZ55_02176 PF07715 TonB-dependent Receptor Plug Domain EZ55_02177 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EZ55_02177 PF02403 Seryl-tRNA synthetase N-terminal domain EZ55_02178 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EZ55_02179 PF16193 AAA C-terminal domain EZ55_02179 PF12002 MgsA AAA+ ATPase C terminal EZ55_02179 PF00004 ATPase family associated with various cellular activities (AAA) EZ55_02180 PF03548 Outer membrane lipoprotein carrier protein LolA EZ55_02181 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EZ55_02181 PF17854 FtsK alpha domain EZ55_02181 PF09397 Ftsk gamma domain EZ55_02181 PF01580 FtsK/SpoIIIE family EZ55_02182 PF01037 Lrp/AsnC ligand binding domain EZ55_02184 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EZ55_02184 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EZ55_02185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EZ55_02186 PF18073 Rubredoxin metal binding domain EZ55_02190 PF00216 Bacterial DNA-binding protein EZ55_02191 PF00575 S1 RNA binding domain EZ55_02192 PF02224 Cytidylate kinase EZ55_02193 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EZ55_02194 PF00266 Aminotransferase class-V EZ55_02195 PF03989 DNA gyrase C-terminal domain, beta-propeller EZ55_02195 PF00521 DNA gyrase/topoisomerase IV, subunit A EZ55_02197 PF03477 ATP cone domain EZ55_02197 PF00317 Ribonucleotide reductase, all-alpha domain EZ55_02197 PF02867 Ribonucleotide reductase, barrel domain EZ55_02198 PF00268 Ribonucleotide reductase, small chain EZ55_02199 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_02200 PF00106 short chain dehydrogenase EZ55_02203 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_02203 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EZ55_02204 PF00563 EAL domain EZ55_02204 PF00990 Diguanylate cyclase, GGDEF domain EZ55_02204 PF03707 Bacterial signalling protein N terminal repeat EZ55_02205 PF00990 Diguanylate cyclase, GGDEF domain EZ55_02206 PF00892 EamA-like transporter family EZ55_02207 PF01259 SAICAR synthetase EZ55_02208 PF06804 NlpB/DapX lipoprotein EZ55_02209 PF00701 Dihydrodipicolinate synthetase family EZ55_02211 PF00578 AhpC/TSA family EZ55_02212 PF01594 AI-2E family transporter EZ55_02213 PF01435 Peptidase family M48 EZ55_02214 PF00578 AhpC/TSA family EZ55_02215 PF03960 ArsC family EZ55_02216 PF03358 NADPH-dependent FMN reductase EZ55_02219 PF00308 Bacterial dnaA protein EZ55_02219 PF08299 Bacterial dnaA protein helix-turn-helix EZ55_02219 PF11638 DnaA N-terminal domain EZ55_02221 PF00586 AIR synthase related protein, N-terminal domain EZ55_02221 PF02769 AIR synthase related protein, C-terminal domain EZ55_02222 PF00551 Formyl transferase EZ55_02224 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_02224 PF09317 Domain of unknown function (DUF1974) EZ55_02224 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_02224 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_02226 PF00196 Bacterial regulatory proteins, luxR family EZ55_02226 PF00072 Response regulator receiver domain EZ55_02227 PF13649 Methyltransferase domain EZ55_02228 PF08003 Protein of unknown function (DUF1698) EZ55_02229 PF00485 Phosphoribulokinase / Uridine kinase family EZ55_02232 PF00128 Alpha amylase, catalytic domain EZ55_02233 PF13419 Haloacid dehalogenase-like hydrolase EZ55_02234 PF03453 MoeA N-terminal region (domain I and II) EZ55_02234 PF03454 MoeA C-terminal region (domain IV) EZ55_02234 PF00994 Probable molybdopterin binding domain EZ55_02235 PF01554 MatE EZ55_02239 PF00291 Pyridoxal-phosphate dependent enzyme EZ55_02253 PF04134 Protein of unknown function, DUF393 EZ55_02255 PF06689 ClpX C4-type zinc finger EZ55_02255 PF10431 C-terminal, D2-small domain, of ClpB protein EZ55_02255 PF07724 AAA domain (Cdc48 subfamily) EZ55_02263 PF02567 Phenazine biosynthesis-like protein EZ55_02265 PF00378 Enoyl-CoA hydratase/isomerase EZ55_02268 PF00255 Glutathione peroxidase EZ55_02269 PF02525 Flavodoxin-like fold EZ55_02271 PF01053 Cys/Met metabolism PLP-dependent enzyme EZ55_02274 PF00155 Aminotransferase class I and II EZ55_02275 PF10459 Peptidase S46 EZ55_02277 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EZ55_02280 PF12806 Acetyl-CoA dehydrogenase C-terminal like EZ55_02280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_02280 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_02280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_02281 PF07883 Cupin domain EZ55_02281 PF12833 Helix-turn-helix domain EZ55_02282 PF07715 TonB-dependent Receptor Plug Domain EZ55_02282 PF00593 TonB dependent receptor EZ55_02284 PF00326 Prolyl oligopeptidase family EZ55_02284 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EZ55_02285 PF00873 AcrB/AcrD/AcrF family EZ55_02286 PF13533 Biotin-lipoyl like EZ55_02288 PF00766 Electron transfer flavoprotein FAD-binding domain EZ55_02288 PF01012 Electron transfer flavoprotein domain EZ55_02289 PF01012 Electron transfer flavoprotein domain EZ55_02291 PF00816 H-NS histone family EZ55_02292 PF00561 alpha/beta hydrolase fold EZ55_02294 PF00258 Flavodoxin EZ55_02295 PF00672 HAMP domain EZ55_02295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_02296 PF01475 Ferric uptake regulator family EZ55_02297 PF13006 Insertion element 4 transposase N-terminal EZ55_02297 PF01609 Transposase DDE domain EZ55_02298 PF01063 Amino-transferase class IV EZ55_02299 PF02626 Carboxyltransferase domain, subdomain A and B EZ55_02300 PF02682 Carboxyltransferase domain, subdomain C and D EZ55_02301 PF03746 LamB/YcsF family EZ55_02302 PF17783 CvfB-like winged helix domain EZ55_02302 PF13509 S1 domain EZ55_02303 PF02566 OsmC-like protein EZ55_02304 PF13533 Biotin-lipoyl like EZ55_02305 PF00873 AcrB/AcrD/AcrF family EZ55_02306 PF00873 AcrB/AcrD/AcrF family EZ55_02309 PF00155 Aminotransferase class I and II EZ55_02311 PF01966 HD domain EZ55_02311 PF13286 Phosphohydrolase-associated domain EZ55_02312 PF00174 Oxidoreductase molybdopterin binding domain EZ55_02313 PF01794 Ferric reductase like transmembrane component EZ55_02316 PF02810 SEC-C motif EZ55_02317 PF00128 Alpha amylase, catalytic domain EZ55_02318 PF00107 Zinc-binding dehydrogenase EZ55_02318 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_02320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_02320 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_02320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_02322 PF07715 TonB-dependent Receptor Plug Domain EZ55_02322 PF00593 TonB dependent receptor EZ55_02326 PF06969 HemN C-terminal domain EZ55_02326 PF04055 Radical SAM superfamily EZ55_02327 PF03459 TOBE domain EZ55_02327 PF00005 ABC transporter EZ55_02328 PF00528 Binding-protein-dependent transport system inner membrane component EZ55_02330 PF02391 MoaE protein EZ55_02331 PF02597 ThiS family EZ55_02332 PF01967 MoaC family EZ55_02333 PF00994 Probable molybdopterin binding domain EZ55_02334 PF00899 ThiF family EZ55_02336 PF02423 Ornithine cyclodeaminase/mu-crystallin family EZ55_02337 PF00155 Aminotransferase class I and II EZ55_02338 PF01037 Lrp/AsnC ligand binding domain EZ55_02341 PF16325 Peptidase family U32 C-terminal domain EZ55_02341 PF01136 Peptidase family U32 EZ55_02342 PF00037 4Fe-4S binding domain EZ55_02343 PF00155 Aminotransferase class I and II EZ55_02344 PF03435 Saccharopine dehydrogenase NADP binding domain EZ55_02345 PF00155 Aminotransferase class I and II EZ55_02348 PF08267 Cobalamin-independent synthase, N-terminal domain EZ55_02348 PF01717 Cobalamin-independent synthase, Catalytic domain EZ55_02349 PF00593 TonB dependent receptor EZ55_02349 PF07715 TonB-dependent Receptor Plug Domain EZ55_02351 PF00892 EamA-like transporter family EZ55_02352 PF02371 Transposase IS116/IS110/IS902 family EZ55_02352 PF01548 Transposase EZ55_02354 PF02245 Methylpurine-DNA glycosylase (MPG) EZ55_02358 PF01810 LysE type translocator EZ55_02359 PF00392 Bacterial regulatory proteins, gntR family EZ55_02359 PF00155 Aminotransferase class I and II EZ55_02361 PF13538 UvrD-like helicase C-terminal domain EZ55_02362 PF12705 PD-(D/E)XK nuclease superfamily EZ55_02362 PF00580 UvrD/REP helicase N-terminal domain EZ55_02362 PF13361 UvrD-like helicase C-terminal domain EZ55_02363 PF17946 RecC C-terminal domain EZ55_02365 PF00501 AMP-binding enzyme EZ55_02366 PF00563 EAL domain EZ55_02366 PF00990 Diguanylate cyclase, GGDEF domain EZ55_02366 PF03707 Bacterial signalling protein N terminal repeat EZ55_02367 PF12706 Beta-lactamase superfamily domain EZ55_02367 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EZ55_02367 PF17770 Ribonuclease J C-terminal domain EZ55_02370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02370 PF03466 LysR substrate binding domain EZ55_02374 PF01022 Bacterial regulatory protein, arsR family EZ55_02376 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02376 PF03466 LysR substrate binding domain EZ55_02378 PF02954 Bacterial regulatory protein, Fis family EZ55_02378 PF00072 Response regulator receiver domain EZ55_02378 PF00158 Sigma-54 interaction domain EZ55_02380 PF08446 PAS fold EZ55_02380 PF00512 His Kinase A (phospho-acceptor) domain EZ55_02380 PF00360 Phytochrome region EZ55_02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_02380 PF01590 GAF domain EZ55_02381 PF00072 Response regulator receiver domain EZ55_02382 PF00072 Response regulator receiver domain EZ55_02382 PF00512 His Kinase A (phospho-acceptor) domain EZ55_02382 PF09308 LuxQ, periplasmic EZ55_02382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_02389 PF07043 Protein of unknown function (DUF1328) EZ55_02393 PF07023 Protein of unknown function (DUF1315) EZ55_02395 PF01235 Sodium:alanine symporter family EZ55_02396 PF00246 Zinc carboxypeptidase EZ55_02396 PF18027 Cytosolic carboxypeptidase N-terminal domain EZ55_02397 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EZ55_02397 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EZ55_02399 PF01641 SelR domain EZ55_02400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EZ55_02400 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EZ55_02401 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EZ55_02401 PF00128 Alpha amylase, catalytic domain EZ55_02402 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EZ55_02402 PF02806 Alpha amylase, C-terminal all-beta domain EZ55_02402 PF00128 Alpha amylase, catalytic domain EZ55_02403 PF02446 4-alpha-glucanotransferase EZ55_02404 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EZ55_02404 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EZ55_02405 PF01263 Aldose 1-epimerase EZ55_02406 PF01081 KDPG and KHG aldolase EZ55_02407 PF02685 Glucokinase EZ55_02408 PF00920 Dehydratase family EZ55_02409 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EZ55_02410 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EZ55_02410 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EZ55_02411 PF01418 Helix-turn-helix domain, rpiR family EZ55_02411 PF01380 SIS domain EZ55_02412 PF00224 Pyruvate kinase, barrel domain EZ55_02412 PF02887 Pyruvate kinase, alpha/beta domain EZ55_02413 PF01048 Phosphorylase superfamily EZ55_02414 PF01548 Transposase EZ55_02414 PF02371 Transposase IS116/IS110/IS902 family EZ55_02418 PF04972 BON domain EZ55_02424 PF09347 Domain of unknown function (DUF1989) EZ55_02429 PF04962 KduI/IolB family EZ55_02430 PF03480 Bacterial extracellular solute-binding protein, family 7 EZ55_02431 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EZ55_02432 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EZ55_02433 PF00356 Bacterial regulatory proteins, lacI family EZ55_02434 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EZ55_02434 PF08666 SAF domain EZ55_02435 PF02614 Glucuronate isomerase EZ55_02436 PF01232 Mannitol dehydrogenase Rossmann domain EZ55_02436 PF08125 Mannitol dehydrogenase C-terminal domain EZ55_02437 PF01081 KDPG and KHG aldolase EZ55_02438 PF00294 pfkB family carbohydrate kinase EZ55_02439 PF13472 GDSL-like Lipase/Acylhydrolase family EZ55_02442 PF07470 Glycosyl Hydrolase Family 88 EZ55_02443 PF00295 Glycosyl hydrolases family 28 EZ55_02444 PF01095 Pectinesterase EZ55_02445 PF01627 Hpt domain EZ55_02445 PF00672 HAMP domain EZ55_02445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_02445 PF00512 His Kinase A (phospho-acceptor) domain EZ55_02445 PF00072 Response regulator receiver domain EZ55_02445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EZ55_02448 PF04231 Endonuclease I EZ55_02449 PF11838 ERAP1-like C-terminal domain EZ55_02449 PF01433 Peptidase family M1 domain EZ55_02450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_02450 PF02743 Cache domain EZ55_02450 PF00672 HAMP domain EZ55_02453 PF03466 LysR substrate binding domain EZ55_02453 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02454 PF01965 DJ-1/PfpI family EZ55_02455 PF00465 Iron-containing alcohol dehydrogenase EZ55_02456 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EZ55_02457 PF00563 EAL domain EZ55_02457 PF00360 Phytochrome region EZ55_02457 PF00990 Diguanylate cyclase, GGDEF domain EZ55_02457 PF01590 GAF domain EZ55_02458 PF00881 Nitroreductase family EZ55_02459 PF00199 Catalase EZ55_02459 PF06628 Catalase-related immune-responsive EZ55_02460 PF11849 Domain of unknown function (DUF3369) EZ55_02461 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_02461 PF00497 Bacterial extracellular solute-binding proteins, family 3 EZ55_02461 PF00512 His Kinase A (phospho-acceptor) domain EZ55_02462 PF12697 Alpha/beta hydrolase family EZ55_02480 PF00939 Sodium:sulfate symporter transmembrane region EZ55_02481 PF00692 dUTPase EZ55_02482 PF10609 NUBPL iron-transfer P-loop NTPase EZ55_02483 PF08264 Anticodon-binding domain of tRNA EZ55_02483 PF09334 tRNA synthetases class I (M) EZ55_02483 PF01588 Putative tRNA binding domain EZ55_02484 PF00924 Mechanosensitive ion channel EZ55_02484 PF05552 Conserved TM helix EZ55_02486 PF08241 Methyltransferase domain EZ55_02487 PF16123 Hydroxyacylglutathione hydrolase C-terminus EZ55_02487 PF00753 Metallo-beta-lactamase superfamily EZ55_02488 PF01464 Transglycosylase SLT domain EZ55_02488 PF01476 LysM domain EZ55_02492 PF04958 Arginine N-succinyltransferase beta subunit EZ55_02493 PF01406 tRNA synthetases class I (C) catalytic domain EZ55_02493 PF09190 DALR domain EZ55_02494 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EZ55_02495 PF00149 Calcineurin-like phosphoesterase EZ55_02497 PF15975 Flotillin EZ55_02497 PF01145 SPFH domain / Band 7 family EZ55_02498 PF03466 LysR substrate binding domain EZ55_02498 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02501 PF00128 Alpha amylase, catalytic domain EZ55_02502 PF01638 HxlR-like helix-turn-helix EZ55_02503 PF00107 Zinc-binding dehydrogenase EZ55_02503 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_02504 PF03741 Integral membrane protein TerC family EZ55_02505 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_02505 PF00107 Zinc-binding dehydrogenase EZ55_02506 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02506 PF03466 LysR substrate binding domain EZ55_02511 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EZ55_02513 PF00156 Phosphoribosyl transferase domain EZ55_02514 PF02674 Colicin V production protein EZ55_02515 PF05036 Sporulation related domain EZ55_02516 PF08245 Mur ligase middle domain EZ55_02516 PF02875 Mur ligase family, glutamate ligase domain EZ55_02517 PF01039 Carboxyl transferase domain EZ55_02517 PF17848 Acetyl-coA carboxylase zinc finger domain EZ55_02518 PF01416 tRNA pseudouridine synthase EZ55_02520 PF02774 Semialdehyde dehydrogenase, dimerisation domain EZ55_02520 PF01118 Semialdehyde dehydrogenase, NAD binding domain EZ55_02521 PF11890 Domain of unknown function (DUF3410) EZ55_02521 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EZ55_02521 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EZ55_02522 PF00596 Class II Aldolase and Adducin N-terminal domain EZ55_02524 PF12697 Alpha/beta hydrolase family EZ55_02527 PF00756 Putative esterase EZ55_02528 PF00109 Beta-ketoacyl synthase, N-terminal domain EZ55_02528 PF02801 Beta-ketoacyl synthase, C-terminal domain EZ55_02529 PF00501 AMP-binding enzyme EZ55_02529 PF13193 AMP-binding enzyme C-terminal domain EZ55_02531 PF01266 FAD dependent oxidoreductase EZ55_02531 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EZ55_02539 PF13411 MerR HTH family regulatory protein EZ55_02542 PF00005 ABC transporter EZ55_02544 PF07683 Cobalamin synthesis protein cobW C-terminal domain EZ55_02544 PF02492 CobW/HypB/UreG, nucleotide-binding domain EZ55_02546 PF02667 Short chain fatty acid transporter EZ55_02547 PF00072 Response regulator receiver domain EZ55_02547 PF01627 Hpt domain EZ55_02547 PF00512 His Kinase A (phospho-acceptor) domain EZ55_02547 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EZ55_02547 PF00672 HAMP domain EZ55_02547 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_02548 PF05193 Peptidase M16 inactive domain EZ55_02548 PF00675 Insulinase (Peptidase family M16) EZ55_02551 PF04315 Elongation factor P hydroxylase EZ55_02557 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EZ55_02557 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_02558 PF00378 Enoyl-CoA hydratase/isomerase EZ55_02559 PF02909 Tetracyclin repressor-like, C-terminal domain EZ55_02559 PF00440 Bacterial regulatory proteins, tetR family EZ55_02560 PF05199 GMC oxidoreductase EZ55_02560 PF00732 GMC oxidoreductase EZ55_02562 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain EZ55_02562 PF06974 Protein of unknown function (DUF1298) EZ55_02563 PF08361 MAATS-type transcriptional repressor, C-terminal region EZ55_02563 PF00440 Bacterial regulatory proteins, tetR family EZ55_02564 PF04286 Protein of unknown function (DUF445) EZ55_02570 PF00326 Prolyl oligopeptidase family EZ55_02570 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EZ55_02571 PF07840 FadR C-terminal domain EZ55_02571 PF00392 Bacterial regulatory proteins, gntR family EZ55_02572 PF06450 Bacterial Na+/H+ antiporter B (NhaB) EZ55_02573 PF02600 Disulfide bond formation protein DsbB EZ55_02574 PF13302 Acetyltransferase (GNAT) domain EZ55_02575 PF03692 Putative zinc- or iron-chelating domain EZ55_02576 PF01557 Fumarylacetoacetate (FAA) hydrolase family EZ55_02578 PF05166 YcgL domain EZ55_02579 PF01612 3'-5' exonuclease EZ55_02579 PF00570 HRDC domain EZ55_02580 PF00501 AMP-binding enzyme EZ55_02580 PF13193 AMP-binding enzyme C-terminal domain EZ55_02581 PF12697 Alpha/beta hydrolase family EZ55_02584 PF00814 Glycoprotease family EZ55_02585 PF06733 DEAD_2 EZ55_02585 PF13307 Helicase C-terminal domain EZ55_02593 PF00128 Alpha amylase, catalytic domain EZ55_02600 PF13614 AAA domain EZ55_02603 PF08029 HisG, C-terminal domain EZ55_02603 PF01634 ATP phosphoribosyltransferase EZ55_02604 PF00815 Histidinol dehydrogenase EZ55_02605 PF00155 Aminotransferase class I and II EZ55_02606 PF00475 Imidazoleglycerol-phosphate dehydratase EZ55_02607 PF00117 Glutamine amidotransferase class-I EZ55_02608 PF00977 Histidine biosynthesis protein EZ55_02609 PF00977 Histidine biosynthesis protein EZ55_02610 PF01502 Phosphoribosyl-AMP cyclohydrolase EZ55_02610 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EZ55_02613 PF01226 Formate/nitrite transporter EZ55_02614 PF00675 Insulinase (Peptidase family M16) EZ55_02614 PF05193 Peptidase M16 inactive domain EZ55_02615 PF10502 Signal peptidase, peptidase S26 EZ55_02617 PF07715 TonB-dependent Receptor Plug Domain EZ55_02617 PF00593 TonB dependent receptor EZ55_02621 PF05191 Adenylate kinase, active site lid EZ55_02622 PF13006 Insertion element 4 transposase N-terminal EZ55_02622 PF01609 Transposase DDE domain EZ55_02623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_02623 PF00183 Hsp90 protein EZ55_02624 PF02132 RecR protein EZ55_02624 PF13662 Toprim domain EZ55_02627 PF00970 Oxidoreductase FAD-binding domain EZ55_02627 PF00175 Oxidoreductase NAD-binding domain EZ55_02628 PF02575 YbaB/EbfC DNA-binding family EZ55_02629 PF12169 DNA polymerase III subunits gamma and tau domain III EZ55_02629 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EZ55_02629 PF12170 DNA polymerase III tau subunit V interacting with alpha EZ55_02630 PF00156 Phosphoribosyl transferase domain EZ55_02633 PF05114 Protein of unknown function (DUF692) EZ55_02641 PF01066 CDP-alcohol phosphatidyltransferase EZ55_02645 PF01565 FAD binding domain EZ55_02645 PF09330 D-lactate dehydrogenase, membrane binding EZ55_02646 PF01565 FAD binding domain EZ55_02646 PF09330 D-lactate dehydrogenase, membrane binding EZ55_02647 PF02652 L-lactate permease EZ55_02648 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02648 PF03466 LysR substrate binding domain EZ55_02651 PF07724 AAA domain (Cdc48 subfamily) EZ55_02651 PF00004 ATPase family associated with various cellular activities (AAA) EZ55_02651 PF17871 AAA lid domain EZ55_02651 PF02861 Clp amino terminal domain, pathogenicity island component EZ55_02651 PF10431 C-terminal, D2-small domain, of ClpB protein EZ55_02652 PF02578 Multi-copper polyphenol oxidoreductase laccase EZ55_02653 PF00849 RNA pseudouridylate synthase EZ55_02653 PF01479 S4 domain EZ55_02654 PF13525 Outer membrane lipoprotein EZ55_02656 PF04545 Sigma-70, region 4 EZ55_02656 PF04542 Sigma-70 region 2 EZ55_02659 PF00106 short chain dehydrogenase EZ55_02663 PF00691 OmpA family EZ55_02663 PF13677 Membrane MotB of proton-channel complex MotA/MotB EZ55_02664 PF01618 MotA/TolQ/ExbB proton channel family EZ55_02665 PF02609 Exonuclease VII small subunit EZ55_02666 PF00348 Polyprenyl synthetase EZ55_02667 PF02779 Transketolase, pyrimidine binding domain EZ55_02667 PF02780 Transketolase, C-terminal domain EZ55_02667 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EZ55_02668 PF04608 Phosphatidylglycerophosphatase A EZ55_02669 PF02769 AIR synthase related protein, C-terminal domain EZ55_02669 PF00586 AIR synthase related protein, N-terminal domain EZ55_02670 PF01029 NusB family EZ55_02671 PF00885 6,7-dimethyl-8-ribityllumazine synthase EZ55_02672 PF00925 GTP cyclohydrolase II EZ55_02672 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EZ55_02673 PF00677 Lumazine binding domain EZ55_02674 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EZ55_02674 PF01872 RibD C-terminal domain EZ55_02675 PF03477 ATP cone domain EZ55_02676 PF00464 Serine hydroxymethyltransferase EZ55_02677 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_02677 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EZ55_02678 PF00005 ABC transporter EZ55_02678 PF12848 ABC transporter EZ55_02680 PF18073 Rubredoxin metal binding domain EZ55_02682 PF18429 Domain of unknown function (DUF5609) EZ55_02684 PF01026 TatD related DNase EZ55_02685 PF01243 Pyridoxamine 5'-phosphate oxidase EZ55_02685 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EZ55_02686 PF07650 KH domain EZ55_02686 PF01926 50S ribosome-binding GTPase EZ55_02687 PF00035 Double-stranded RNA binding motif EZ55_02687 PF14622 Ribonuclease-III-like EZ55_02688 PF10502 Signal peptidase, peptidase S26 EZ55_02689 PF06421 GTP-binding protein LepA C-terminus EZ55_02689 PF03144 Elongation factor Tu domain 2 EZ55_02689 PF00679 Elongation factor G C-terminus EZ55_02689 PF00009 Elongation factor Tu GTP binding domain EZ55_02691 PF03888 MucB/RseB N-terminal domain EZ55_02691 PF17188 MucB/RseB C-terminal domain EZ55_02693 PF04542 Sigma-70 region 2 EZ55_02693 PF08281 Sigma-70, region 4 EZ55_02694 PF00890 FAD binding domain EZ55_02694 PF02910 Fumarate reductase flavoprotein C-term EZ55_02697 PF03937 Flavinator of succinate dehydrogenase EZ55_02699 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EZ55_02700 PF00543 Nitrogen regulatory protein P-II EZ55_02701 PF02540 NAD synthase EZ55_02708 PF07963 Prokaryotic N-terminal methylation motif EZ55_02708 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor EZ55_02713 PF02401 LytB protein EZ55_02714 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EZ55_02715 PF01252 Signal peptidase (SPase) II EZ55_02716 PF06827 Zinc finger found in FPG and IleRS EZ55_02716 PF00133 tRNA synthetases class I (I, L, M and V) EZ55_02716 PF08264 Anticodon-binding domain of tRNA EZ55_02717 PF06574 FAD synthetase EZ55_02717 PF01687 Riboflavin kinase EZ55_02718 PF03023 Lipid II flippase MurJ EZ55_02719 PF01649 Ribosomal protein S20 EZ55_02720 PF00106 short chain dehydrogenase EZ55_02723 PF01758 Sodium Bile acid symporter family EZ55_02724 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02724 PF03466 LysR substrate binding domain EZ55_02727 PF01546 Peptidase family M20/M25/M40 EZ55_02727 PF07687 Peptidase dimerisation domain EZ55_02729 PF13145 PPIC-type PPIASE domain EZ55_02730 PF00216 Bacterial DNA-binding protein EZ55_02731 PF00004 ATPase family associated with various cellular activities (AAA) EZ55_02731 PF05362 Lon protease (S16) C-terminal proteolytic domain EZ55_02731 PF02190 ATP-dependent protease La (LON) substrate-binding domain EZ55_02732 PF06689 ClpX C4-type zinc finger EZ55_02732 PF10431 C-terminal, D2-small domain, of ClpB protein EZ55_02732 PF07724 AAA domain (Cdc48 subfamily) EZ55_02733 PF00574 Clp protease EZ55_02734 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EZ55_02734 PF05698 Bacterial trigger factor protein (TF) C-terminus EZ55_02734 PF05697 Bacterial trigger factor protein (TF) EZ55_02743 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EZ55_02743 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EZ55_02745 PF18389 TrmO C-terminal domain EZ55_02745 PF01980 tRNA-methyltransferase O EZ55_02746 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EZ55_02746 PF03129 Anticodon binding domain EZ55_02747 PF00753 Metallo-beta-lactamase superfamily EZ55_02747 PF12706 Beta-lactamase superfamily domain EZ55_02748 PF02253 Phospholipase A1 EZ55_02749 PF00850 Histone deacetylase domain EZ55_02750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_02750 PF00672 HAMP domain EZ55_02751 PF00117 Glutamine amidotransferase class-I EZ55_02751 PF00958 GMP synthase C terminal domain EZ55_02751 PF02540 NAD synthase EZ55_02752 PF00478 IMP dehydrogenase / GMP reductase domain EZ55_02752 PF00571 CBS domain EZ55_02753 PF13742 OB-fold nucleic acid binding domain EZ55_02753 PF02601 Exonuclease VII, large subunit EZ55_02756 PF01926 50S ribosome-binding GTPase EZ55_02756 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EZ55_02757 PF13360 PQQ-like domain EZ55_02758 PF09976 Tetratricopeptide repeat-like domain EZ55_02759 PF03129 Anticodon binding domain EZ55_02759 PF13393 Histidyl-tRNA synthetase EZ55_02760 PF04551 GcpE protein EZ55_02761 PF13464 Domain of unknown function (DUF4115) EZ55_02763 PF04055 Radical SAM superfamily EZ55_02764 PF00334 Nucleoside diphosphate kinase EZ55_02765 PF02657 Fe-S metabolism associated domain EZ55_02766 PF01883 Iron-sulfur cluster assembly protein EZ55_02767 PF01521 Iron-sulphur cluster biosynthesis EZ55_02768 PF00266 Aminotransferase class-V EZ55_02769 PF01458 Uncharacterized protein family (UPF0051) EZ55_02770 PF00005 ABC transporter EZ55_02771 PF01458 Uncharacterized protein family (UPF0051) EZ55_02772 PF00266 Aminotransferase class-V EZ55_02773 PF02082 Transcriptional regulator EZ55_02775 PF00743 Flavin-binding monooxygenase-like EZ55_02776 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_02776 PF06426 Serine acetyltransferase, N-terminal EZ55_02777 PF00588 SpoU rRNA Methylase family EZ55_02778 PF00459 Inositol monophosphatase family EZ55_02780 PF00072 Response regulator receiver domain EZ55_02780 PF04397 LytTr DNA-binding domain EZ55_02781 PF02355 Protein export membrane protein EZ55_02781 PF07549 SecD/SecF GG Motif EZ55_02782 PF02355 Protein export membrane protein EZ55_02782 PF13721 SecD export protein N-terminal TM region EZ55_02782 PF07549 SecD/SecF GG Motif EZ55_02783 PF02699 Preprotein translocase subunit EZ55_02784 PF01702 Queuine tRNA-ribosyltransferase EZ55_02785 PF02547 Queuosine biosynthesis protein EZ55_02787 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) EZ55_02788 PF04012 PspA/IM30 family EZ55_02789 PF07885 Ion channel EZ55_02792 PF06693 Protein of unknown function (DUF1190) EZ55_02793 PF03738 Glutathionylspermidine synthase preATP-grasp EZ55_02796 PF00005 ABC transporter EZ55_02799 PF04960 Glutaminase EZ55_02800 PF00245 Alkaline phosphatase EZ55_02801 PF00072 Response regulator receiver domain EZ55_02802 PF00463 Isocitrate lyase family EZ55_02803 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02803 PF03466 LysR substrate binding domain EZ55_02804 PF01274 Malate synthase EZ55_02806 PF01370 NAD dependent epimerase/dehydratase family EZ55_02807 PF13180 PDZ domain EZ55_02814 PF00872 Transposase, Mutator family EZ55_02815 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal EZ55_02815 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_02815 PF14602 Hexapeptide repeat of succinyl-transferase EZ55_02819 PF13439 Glycosyltransferase Family 4 EZ55_02819 PF00534 Glycosyl transferases group 1 EZ55_02822 PF13537 Glutamine amidotransferase domain EZ55_02822 PF00733 Asparagine synthase EZ55_02823 PF00534 Glycosyl transferases group 1 EZ55_02823 PF13439 Glycosyltransferase Family 4 EZ55_02825 PF00535 Glycosyl transferase family 2 EZ55_02829 PF01943 Polysaccharide biosynthesis protein EZ55_02836 PF01522 Polysaccharide deacetylase EZ55_02837 PF02397 Bacterial sugar transferase EZ55_02841 PF13614 AAA domain EZ55_02843 PF13401 AAA domain EZ55_02843 PF01471 Putative peptidoglycan binding domain EZ55_02844 PF01541 GIY-YIG catalytic domain EZ55_02846 PF08335 GlnD PII-uridylyltransferase EZ55_02846 PF03710 Glutamate-ammonia ligase adenylyltransferase EZ55_02848 PF03279 Bacterial lipid A biosynthesis acyltransferase EZ55_02851 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_02851 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_02851 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_02851 PF09317 Domain of unknown function (DUF1974) EZ55_02856 PF03707 Bacterial signalling protein N terminal repeat EZ55_02856 PF00563 EAL domain EZ55_02856 PF00990 Diguanylate cyclase, GGDEF domain EZ55_02857 PF00265 Thymidine kinase EZ55_02859 PF04820 Tryptophan halogenase EZ55_02860 PF00356 Bacterial regulatory proteins, lacI family EZ55_02865 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation EZ55_02865 PF14508 Glycosyl-hydrolase 97 N-terminal EZ55_02865 PF10566 Glycoside hydrolase 97 EZ55_02866 PF01926 50S ribosome-binding GTPase EZ55_02867 PF00588 SpoU rRNA Methylase family EZ55_02867 PF08032 RNA 2'-O ribose methyltransferase substrate binding EZ55_02870 PF01276 Orn/Lys/Arg decarboxylase, major domain EZ55_02870 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EZ55_02870 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EZ55_02876 PF00171 Aldehyde dehydrogenase family EZ55_02877 PF00732 GMC oxidoreductase EZ55_02877 PF05199 GMC oxidoreductase EZ55_02880 PF05971 RNA methyltransferase EZ55_02881 PF09278 MerR, DNA binding EZ55_02881 PF00376 MerR family regulatory protein EZ55_02885 PF00872 Transposase, Mutator family EZ55_02886 PF05230 MASE2 domain EZ55_02886 PF00990 Diguanylate cyclase, GGDEF domain EZ55_02889 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_02889 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_02889 PF18158 Adaptive response protein AidB N-terminal domain EZ55_02895 PF03965 Penicillinase repressor EZ55_02899 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EZ55_02901 PF01799 [2Fe-2S] binding domain EZ55_02901 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_02902 PF03450 CO dehydrogenase flavoprotein C-terminal domain EZ55_02902 PF00941 FAD binding domain in molybdopterin dehydrogenase EZ55_02903 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EZ55_02903 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EZ55_02904 PF01738 Dienelactone hydrolase family EZ55_02911 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EZ55_02912 PF00528 Binding-protein-dependent transport system inner membrane component EZ55_02913 PF00528 Binding-protein-dependent transport system inner membrane component EZ55_02913 PF12911 N-terminal TM domain of oligopeptide transport permease C EZ55_02914 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EZ55_02914 PF00005 ABC transporter EZ55_02918 PF00106 short chain dehydrogenase EZ55_02919 PF01965 DJ-1/PfpI family EZ55_02921 PF03631 Virulence factor BrkB EZ55_02922 PF07690 Major Facilitator Superfamily EZ55_02923 PF00144 Beta-lactamase EZ55_02925 PF04397 LytTr DNA-binding domain EZ55_02925 PF00072 Response regulator receiver domain EZ55_02926 PF06719 AraC-type transcriptional regulator N-terminus EZ55_02926 PF12833 Helix-turn-helix domain EZ55_02927 PF12146 Serine aminopeptidase, S33 EZ55_02928 PF12146 Serine aminopeptidase, S33 EZ55_02931 PF00873 AcrB/AcrD/AcrF family EZ55_02935 PF00962 Adenosine/AMP deaminase EZ55_02938 PF07152 YaeQ protein EZ55_02943 PF02371 Transposase IS116/IS110/IS902 family EZ55_02943 PF01548 Transposase EZ55_02945 PF07690 Major Facilitator Superfamily EZ55_02946 PF01432 Peptidase family M3 EZ55_02948 PF01258 Prokaryotic dksA/traR C4-type zinc finger EZ55_02949 PF00696 Amino acid kinase family EZ55_02949 PF00583 Acetyltransferase (GNAT) family EZ55_02950 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EZ55_02950 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EZ55_02950 PF06827 Zinc finger found in FPG and IleRS EZ55_02954 PF00270 DEAD/DEAH box helicase EZ55_02954 PF00271 Helicase conserved C-terminal domain EZ55_02954 PF16124 RecQ zinc-binding EZ55_02954 PF00570 HRDC domain EZ55_02954 PF09382 RQC domain EZ55_02957 PF00072 Response regulator receiver domain EZ55_02957 PF01627 Hpt domain EZ55_02957 PF00512 His Kinase A (phospho-acceptor) domain EZ55_02957 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_02957 PF00672 HAMP domain EZ55_02957 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EZ55_02959 PF00360 Phytochrome region EZ55_02959 PF08446 PAS fold EZ55_02959 PF00512 His Kinase A (phospho-acceptor) domain EZ55_02959 PF01590 GAF domain EZ55_02959 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_02960 PF07995 Glucose / Sorbosone dehydrogenase EZ55_02966 PF01695 IstB-like ATP binding protein EZ55_02968 PF13276 HTH-like domain EZ55_02968 PF00665 Integrase core domain EZ55_02968 PF13333 Integrase core domain EZ55_02970 PF00665 Integrase core domain EZ55_02976 PF02347 Glycine cleavage system P-protein EZ55_02977 PF01597 Glycine cleavage H-protein EZ55_02978 PF08669 Glycine cleavage T-protein C-terminal barrel domain EZ55_02978 PF01571 Aminomethyltransferase folate-binding domain EZ55_02979 PF07690 Major Facilitator Superfamily EZ55_02980 PF01979 Amidohydrolase family EZ55_02981 PF01380 SIS domain EZ55_02982 PF01869 BadF/BadG/BcrA/BcrD ATPase family EZ55_02983 PF02838 Glycosyl hydrolase family 20, domain 2 EZ55_02983 PF03173 Putative carbohydrate binding domain EZ55_02983 PF00728 Glycosyl hydrolase family 20, catalytic domain EZ55_02985 PF00356 Bacterial regulatory proteins, lacI family EZ55_02986 PF04820 Tryptophan halogenase EZ55_02987 PF03466 LysR substrate binding domain EZ55_02987 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_02990 PF01321 Creatinase/Prolidase N-terminal domain EZ55_02990 PF00557 Metallopeptidase family M24 EZ55_02993 PF01494 FAD binding domain EZ55_02994 PF01494 FAD binding domain EZ55_02995 PF00557 Metallopeptidase family M24 EZ55_02995 PF05195 Aminopeptidase P, N-terminal domain EZ55_02996 PF03695 Uncharacterised protein family (UPF0149) EZ55_02998 PF00294 pfkB family carbohydrate kinase EZ55_02999 PF01156 Inosine-uridine preferring nucleoside hydrolase EZ55_03000 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03001 PF01812 5-formyltetrahydrofolate cyclo-ligase family EZ55_03002 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EZ55_03003 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EZ55_03003 PF01842 ACT domain EZ55_03003 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EZ55_03006 PF01548 Transposase EZ55_03006 PF02371 Transposase IS116/IS110/IS902 family EZ55_03009 PF00873 AcrB/AcrD/AcrF family EZ55_03010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_03011 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_03011 PF03466 LysR substrate binding domain EZ55_03012 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_03012 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EZ55_03013 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EZ55_03013 PF00364 Biotin-requiring enzyme EZ55_03013 PF02817 e3 binding domain EZ55_03014 PF00456 Transketolase, thiamine diphosphate binding domain EZ55_03014 PF17831 Pyruvate dehydrogenase E1 component middle domain EZ55_03015 PF07729 FCD domain EZ55_03015 PF00392 Bacterial regulatory proteins, gntR family EZ55_03017 PF01510 N-acetylmuramoyl-L-alanine amidase EZ55_03019 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EZ55_03019 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EZ55_03021 PF00482 Type II secretion system (T2SS), protein F EZ55_03022 PF01478 Type IV leader peptidase family EZ55_03022 PF06750 Bacterial Peptidase A24 N-terminal domain EZ55_03023 PF01121 Dephospho-CoA kinase EZ55_03024 PF07072 Cell division protein EZ55_03025 PF03884 DNA gyrase inhibitor YacG EZ55_03026 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EZ55_03027 PF02743 Cache domain EZ55_03027 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_03027 PF00672 HAMP domain EZ55_03028 PF00072 Response regulator receiver domain EZ55_03028 PF00196 Bacterial regulatory proteins, luxR family EZ55_03029 PF13614 AAA domain EZ55_03031 PF07194 P2 response regulator binding domain EZ55_03031 PF01627 Hpt domain EZ55_03031 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03031 PF02895 Signal transducing histidine kinase, homodimeric domain EZ55_03031 PF01584 CheW-like domain EZ55_03032 PF00072 Response regulator receiver domain EZ55_03033 PF03705 CheR methyltransferase, all-alpha domain EZ55_03033 PF01739 CheR methyltransferase, SAM binding domain EZ55_03035 PF00072 Response regulator receiver domain EZ55_03035 PF01339 CheB methylesterase EZ55_03036 PF01584 CheW-like domain EZ55_03037 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_03037 PF02743 Cache domain EZ55_03037 PF00672 HAMP domain EZ55_03038 PF00293 NUDIX domain EZ55_03039 PF07517 SecA DEAD-like domain EZ55_03039 PF01043 SecA preprotein cross-linking domain EZ55_03039 PF07516 SecA Wing and Scaffold domain EZ55_03039 PF02810 SEC-C motif EZ55_03040 PF01551 Peptidase family M23 EZ55_03040 PF08525 Opacity-associated protein A N-terminal motif EZ55_03040 PF01476 LysM domain EZ55_03041 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EZ55_03042 PF00091 Tubulin/FtsZ family, GTPase domain EZ55_03042 PF12327 FtsZ family, C-terminal domain EZ55_03043 PF02491 SHS2 domain inserted in FTSA EZ55_03044 PF08478 POTRA domain, FtsQ-type EZ55_03044 PF03799 Cell division protein FtsQ EZ55_03045 PF01820 D-ala D-ala ligase N-terminus EZ55_03045 PF07478 D-ala D-ala ligase C-terminus EZ55_03046 PF08245 Mur ligase middle domain EZ55_03046 PF01225 Mur ligase family, catalytic domain EZ55_03046 PF02875 Mur ligase family, glutamate ligase domain EZ55_03047 PF04101 Glycosyltransferase family 28 C-terminal domain EZ55_03047 PF03033 Glycosyltransferase family 28 N-terminal domain EZ55_03048 PF01098 Cell cycle protein EZ55_03049 PF02875 Mur ligase family, glutamate ligase domain EZ55_03049 PF08245 Mur ligase middle domain EZ55_03050 PF00953 Glycosyl transferase family 4 EZ55_03050 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EZ55_03051 PF01225 Mur ligase family, catalytic domain EZ55_03051 PF02875 Mur ligase family, glutamate ligase domain EZ55_03051 PF08245 Mur ligase middle domain EZ55_03052 PF02875 Mur ligase family, glutamate ligase domain EZ55_03052 PF01225 Mur ligase family, catalytic domain EZ55_03052 PF08245 Mur ligase middle domain EZ55_03053 PF03717 Penicillin-binding Protein dimerisation domain EZ55_03053 PF00905 Penicillin binding protein transpeptidase domain EZ55_03054 PF04999 Cell division protein FtsL EZ55_03055 PF01795 MraW methylase family EZ55_03056 PF02381 MraZ protein, putative antitoxin-like EZ55_03060 PF00873 AcrB/AcrD/AcrF family EZ55_03061 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_03061 PF00529 HlyD membrane-fusion protein of T1SS EZ55_03066 PF08534 Redoxin EZ55_03066 PF00462 Glutaredoxin EZ55_03067 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EZ55_03069 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03071 PF00158 Sigma-54 interaction domain EZ55_03071 PF02954 Bacterial regulatory protein, Fis family EZ55_03071 PF00072 Response regulator receiver domain EZ55_03072 PF00989 PAS fold EZ55_03072 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03072 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03072 PF18415 Histidine kinase receptor ArcB trans-membrane domain EZ55_03072 PF01627 Hpt domain EZ55_03072 PF00072 Response regulator receiver domain EZ55_03073 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EZ55_03073 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EZ55_03076 PF00924 Mechanosensitive ion channel EZ55_03076 PF05552 Conserved TM helix EZ55_03077 PF04452 RNA methyltransferase EZ55_03078 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EZ55_03078 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EZ55_03079 PF02622 Uncharacterized ACR, COG1678 EZ55_03080 PF03652 Holliday junction resolvase EZ55_03082 PF00437 Type II/IV secretion system protein EZ55_03083 PF00437 Type II/IV secretion system protein EZ55_03084 PF01168 Alanine racemase, N-terminal domain EZ55_03085 PF03807 NADP oxidoreductase coenzyme F420-dependent EZ55_03085 PF14748 Pyrroline-5-carboxylate reductase dimerisation EZ55_03086 PF02325 YGGT family EZ55_03088 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_03088 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EZ55_03092 PF00080 Copper/zinc superoxide dismutase (SODC) EZ55_03095 PF02566 OsmC-like protein EZ55_03096 PF01625 Peptide methionine sulfoxide reductase EZ55_03098 PF03591 AzlC protein EZ55_03100 PF07690 Major Facilitator Superfamily EZ55_03103 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_03103 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_03103 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_03104 PF03060 Nitronate monooxygenase EZ55_03105 PF01039 Carboxyl transferase domain EZ55_03106 PF00378 Enoyl-CoA hydratase/isomerase EZ55_03107 PF02785 Biotin carboxylase C-terminal domain EZ55_03107 PF00289 Biotin carboxylase, N-terminal domain EZ55_03107 PF00364 Biotin-requiring enzyme EZ55_03107 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EZ55_03110 PF00501 AMP-binding enzyme EZ55_03110 PF13193 AMP-binding enzyme C-terminal domain EZ55_03111 PF03883 Peroxide stress protein YaaA EZ55_03112 PF00923 Transaldolase/Fructose-6-phosphate aldolase EZ55_03113 PF00342 Phosphoglucose isomerase EZ55_03115 PF03167 Uracil DNA glycosylase superfamily EZ55_03116 PF00291 Pyridoxal-phosphate dependent enzyme EZ55_03116 PF14821 Threonine synthase N terminus EZ55_03117 PF08544 GHMP kinases C terminal EZ55_03117 PF00288 GHMP kinases N terminal domain EZ55_03118 PF03447 Homoserine dehydrogenase, NAD binding domain EZ55_03118 PF00742 Homoserine dehydrogenase EZ55_03118 PF00696 Amino acid kinase family EZ55_03118 PF01842 ACT domain EZ55_03118 PF13840 ACT domain EZ55_03119 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_03119 PF03466 LysR substrate binding domain EZ55_03120 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_03120 PF00107 Zinc-binding dehydrogenase EZ55_03122 PF00196 Bacterial regulatory proteins, luxR family EZ55_03122 PF00072 Response regulator receiver domain EZ55_03123 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03123 PF07730 Histidine kinase EZ55_03126 PF01022 Bacterial regulatory protein, arsR family EZ55_03128 PF03358 NADPH-dependent FMN reductase EZ55_03129 PF01758 Sodium Bile acid symporter family EZ55_03130 PF00072 Response regulator receiver domain EZ55_03130 PF01339 CheB methylesterase EZ55_03131 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) EZ55_03132 PF00072 Response regulator receiver domain EZ55_03132 PF00486 Transcriptional regulatory protein, C terminal EZ55_03133 PF08521 Two-component sensor kinase N-terminal EZ55_03133 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03133 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03137 PF00291 Pyridoxal-phosphate dependent enzyme EZ55_03139 PF00962 Adenosine/AMP deaminase EZ55_03140 PF04116 Fatty acid hydroxylase superfamily EZ55_03144 PF16653 Saccharopine dehydrogenase C-terminal domain EZ55_03144 PF03435 Saccharopine dehydrogenase NADP binding domain EZ55_03145 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EZ55_03146 PF00535 Glycosyl transferase family 2 EZ55_03148 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EZ55_03149 PF04348 LppC putative lipoprotein EZ55_03150 PF02021 Uncharacterised protein family UPF0102 EZ55_03151 PF00534 Glycosyl transferases group 1 EZ55_03152 PF13580 SIS domain EZ55_03153 PF04972 BON domain EZ55_03154 PF07690 Major Facilitator Superfamily EZ55_03156 PF00893 Small Multidrug Resistance protein EZ55_03157 PF07730 Histidine kinase EZ55_03158 PF00196 Bacterial regulatory proteins, luxR family EZ55_03158 PF00072 Response regulator receiver domain EZ55_03161 PF07715 TonB-dependent Receptor Plug Domain EZ55_03161 PF00593 TonB dependent receptor EZ55_03165 PF00285 Citrate synthase, C-terminal domain EZ55_03166 PF00330 Aconitase family (aconitate hydratase) EZ55_03166 PF00694 Aconitase C-terminal domain EZ55_03167 PF04303 PrpF protein EZ55_03168 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03169 PF00474 Sodium:solute symporter family EZ55_03172 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03172 PF18415 Histidine kinase receptor ArcB trans-membrane domain EZ55_03172 PF01627 Hpt domain EZ55_03172 PF00989 PAS fold EZ55_03172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03172 PF00072 Response regulator receiver domain EZ55_03173 PF01510 N-acetylmuramoyl-L-alanine amidase EZ55_03174 PF01645 Conserved region in glutamate synthase EZ55_03174 PF01493 GXGXG motif EZ55_03174 PF00310 Glutamine amidotransferases class-II EZ55_03174 PF04898 Glutamate synthase central domain EZ55_03175 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_03175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EZ55_03179 PF01048 Phosphorylase superfamily EZ55_03180 PF03186 CobD/Cbib protein EZ55_03181 PF01497 Periplasmic binding protein EZ55_03182 PF00581 Rhodanese-like domain EZ55_03185 PF01266 FAD dependent oxidoreductase EZ55_03186 PF07237 Protein of unknown function (DUF1428) EZ55_03190 PF00579 tRNA synthetases class I (W and Y) EZ55_03191 PF01551 Peptidase family M23 EZ55_03191 PF10145 Phage-related minor tail protein EZ55_03191 PF01464 Transglycosylase SLT domain EZ55_03192 PF03702 Anhydro-N-acetylmuramic acid kinase EZ55_03193 PF03600 Citrate transporter EZ55_03194 PF07690 Major Facilitator Superfamily EZ55_03196 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EZ55_03198 PF01053 Cys/Met metabolism PLP-dependent enzyme EZ55_03199 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EZ55_03199 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EZ55_03200 PF00043 Glutathione S-transferase, C-terminal domain EZ55_03200 PF13417 Glutathione S-transferase, N-terminal domain EZ55_03201 PF01521 Iron-sulphur cluster biosynthesis EZ55_03202 PF03976 Polyphosphate kinase 2 (PPK2) EZ55_03203 PF03776 Septum formation topological specificity factor MinE EZ55_03204 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EZ55_03205 PF05209 Septum formation inhibitor MinC, N-terminal domain EZ55_03205 PF03775 Septum formation inhibitor MinC, C-terminal domain EZ55_03206 PF10415 Fumarase C C-terminus EZ55_03206 PF00206 Lyase EZ55_03208 PF00127 Copper binding proteins, plastocyanin/azurin family EZ55_03212 PF03653 Uncharacterised protein family (UPF0093) EZ55_03215 PF01566 Natural resistance-associated macrophage protein EZ55_03216 PF00155 Aminotransferase class I and II EZ55_03217 PF00072 Response regulator receiver domain EZ55_03217 PF00486 Transcriptional regulatory protein, C terminal EZ55_03218 PF03144 Elongation factor Tu domain 2 EZ55_03218 PF00679 Elongation factor G C-terminus EZ55_03218 PF00009 Elongation factor Tu GTP binding domain EZ55_03220 PF00120 Glutamine synthetase, catalytic domain EZ55_03220 PF03951 Glutamine synthetase, beta-Grasp domain EZ55_03222 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03222 PF00989 PAS fold EZ55_03222 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03223 PF00158 Sigma-54 interaction domain EZ55_03223 PF00072 Response regulator receiver domain EZ55_03223 PF02954 Bacterial regulatory protein, Fis family EZ55_03224 PF00072 Response regulator receiver domain EZ55_03225 PF01553 Acyltransferase EZ55_03226 PF06877 Regulator of ribonuclease activity B EZ55_03228 PF07536 HWE histidine kinase EZ55_03228 PF08447 PAS fold EZ55_03228 PF13426 PAS domain EZ55_03233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03233 PF00672 HAMP domain EZ55_03233 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03233 PF01627 Hpt domain EZ55_03233 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EZ55_03233 PF00072 Response regulator receiver domain EZ55_03234 PF08264 Anticodon-binding domain of tRNA EZ55_03234 PF00133 tRNA synthetases class I (I, L, M and V) EZ55_03234 PF10458 Valyl tRNA synthetase tRNA binding arm EZ55_03235 PF04364 DNA polymerase III chi subunit, HolC EZ55_03236 PF00883 Cytosol aminopeptidase family, catalytic domain EZ55_03236 PF02789 Cytosol aminopeptidase family, N-terminal domain EZ55_03237 PF03739 Lipopolysaccharide export system permease LptF/LptG EZ55_03238 PF03739 Lipopolysaccharide export system permease LptF/LptG EZ55_03241 PF04545 Sigma-70, region 4 EZ55_03241 PF04542 Sigma-70 region 2 EZ55_03248 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03255 PF01527 Transposase EZ55_03266 PF03466 LysR substrate binding domain EZ55_03266 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_03268 PF00171 Aldehyde dehydrogenase family EZ55_03270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EZ55_03270 PF02770 Acyl-CoA dehydrogenase, middle domain EZ55_03270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EZ55_03271 PF12833 Helix-turn-helix domain EZ55_03271 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EZ55_03272 PF00501 AMP-binding enzyme EZ55_03273 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EZ55_03273 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EZ55_03273 PF00378 Enoyl-CoA hydratase/isomerase EZ55_03274 PF00108 Thiolase, N-terminal domain EZ55_03274 PF02803 Thiolase, C-terminal domain EZ55_03275 PF02515 CoA-transferase family III EZ55_03276 PF01638 HxlR-like helix-turn-helix EZ55_03283 PF13361 UvrD-like helicase C-terminal domain EZ55_03283 PF00580 UvrD/REP helicase N-terminal domain EZ55_03286 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EZ55_03286 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EZ55_03287 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03287 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03287 PF00072 Response regulator receiver domain EZ55_03287 PF07494 Two component regulator propeller EZ55_03287 PF12833 Helix-turn-helix domain EZ55_03287 PF07495 Y_Y_Y domain EZ55_03288 PF01594 AI-2E family transporter EZ55_03289 PF07715 TonB-dependent Receptor Plug Domain EZ55_03289 PF00593 TonB dependent receptor EZ55_03292 PF00107 Zinc-binding dehydrogenase EZ55_03292 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_03293 PF13098 Thioredoxin-like domain EZ55_03294 PF00578 AhpC/TSA family EZ55_03295 PF00072 Response regulator receiver domain EZ55_03295 PF00486 Transcriptional regulatory protein, C terminal EZ55_03296 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03296 PF08521 Two-component sensor kinase N-terminal EZ55_03301 PF00230 Major intrinsic protein EZ55_03302 PF00892 EamA-like transporter family EZ55_03305 PF02659 Putative manganese efflux pump EZ55_03307 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EZ55_03308 PF00557 Metallopeptidase family M24 EZ55_03308 PF01321 Creatinase/Prolidase N-terminal domain EZ55_03309 PF05221 S-adenosyl-L-homocysteine hydrolase EZ55_03309 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EZ55_03310 PF01548 Transposase EZ55_03310 PF02371 Transposase IS116/IS110/IS902 family EZ55_03311 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03313 PF03547 Membrane transport protein EZ55_03314 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EZ55_03314 PF13360 PQQ-like domain EZ55_03315 PF01011 PQQ enzyme repeat EZ55_03315 PF13360 PQQ-like domain EZ55_03319 PF00005 ABC transporter EZ55_03321 PF02789 Cytosol aminopeptidase family, N-terminal domain EZ55_03321 PF00883 Cytosol aminopeptidase family, catalytic domain EZ55_03322 PF12706 Beta-lactamase superfamily domain EZ55_03323 PF03070 TENA/THI-4/PQQC family EZ55_03324 PF05402 Coenzyme PQQ synthesis protein D (PqqD) EZ55_03325 PF13186 Iron-sulfur cluster-binding domain EZ55_03325 PF04055 Radical SAM superfamily EZ55_03330 PF00196 Bacterial regulatory proteins, luxR family EZ55_03330 PF00072 Response regulator receiver domain EZ55_03331 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03331 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03333 PF12801 4Fe-4S binding domain EZ55_03333 PF04205 FMN-binding domain EZ55_03334 PF00171 Aldehyde dehydrogenase family EZ55_03335 PF00072 Response regulator receiver domain EZ55_03335 PF00196 Bacterial regulatory proteins, luxR family EZ55_03336 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03336 PF07730 Histidine kinase EZ55_03336 PF05231 MASE1 EZ55_03337 PF13426 PAS domain EZ55_03337 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_03337 PF08447 PAS fold EZ55_03339 PF00171 Aldehyde dehydrogenase family EZ55_03340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EZ55_03340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EZ55_03341 PF02028 BCCT, betaine/carnitine/choline family transporter EZ55_03344 PF07715 TonB-dependent Receptor Plug Domain EZ55_03344 PF00593 TonB dependent receptor EZ55_03345 PF00149 Calcineurin-like phosphoesterase EZ55_03345 PF16656 Purple acid Phosphatase, N-terminal domain EZ55_03346 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_03346 PF03466 LysR substrate binding domain EZ55_03347 PF01070 FMN-dependent dehydrogenase EZ55_03348 PF01565 FAD binding domain EZ55_03348 PF09330 D-lactate dehydrogenase, membrane binding EZ55_03349 PF00196 Bacterial regulatory proteins, luxR family EZ55_03350 PF03783 Curli production assembly/transport component CsgG EZ55_03355 PF00082 Subtilase family EZ55_03356 PF00196 Bacterial regulatory proteins, luxR family EZ55_03356 PF00072 Response regulator receiver domain EZ55_03357 PF07730 Histidine kinase EZ55_03357 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03359 PF00271 Helicase conserved C-terminal domain EZ55_03359 PF00270 DEAD/DEAH box helicase EZ55_03360 PF00924 Mechanosensitive ion channel EZ55_03360 PF12795 Mechanosensitive ion channel porin domain EZ55_03360 PF12794 Mechanosensitive ion channel inner membrane domain 1 EZ55_03362 PF00141 Peroxidase EZ55_03364 PF00563 EAL domain EZ55_03364 PF13426 PAS domain EZ55_03364 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03367 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_03367 PF03466 LysR substrate binding domain EZ55_03369 PF01925 Sulfite exporter TauE/SafE EZ55_03370 PF00155 Aminotransferase class I and II EZ55_03371 PF08769 Sporulation initiation factor Spo0A C terminal EZ55_03371 PF00072 Response regulator receiver domain EZ55_03373 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03375 PF03104 DNA polymerase family B, exonuclease domain EZ55_03375 PF00136 DNA polymerase family B EZ55_03377 PF13193 AMP-binding enzyme C-terminal domain EZ55_03377 PF00501 AMP-binding enzyme EZ55_03385 PF05958 tRNA (Uracil-5-)-methyltransferase EZ55_03386 PF00440 Bacterial regulatory proteins, tetR family EZ55_03388 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EZ55_03388 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_03390 PF03167 Uracil DNA glycosylase superfamily EZ55_03391 PF00563 EAL domain EZ55_03391 PF03707 Bacterial signalling protein N terminal repeat EZ55_03391 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03393 PF01507 Phosphoadenosine phosphosulfate reductase family EZ55_03394 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EZ55_03394 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EZ55_03395 PF00667 FAD binding domain EZ55_03395 PF00258 Flavodoxin EZ55_03395 PF00175 Oxidoreductase NAD-binding domain EZ55_03399 PF04024 PspC domain EZ55_03400 PF04012 PspA/IM30 family EZ55_03402 PF01207 Dihydrouridine synthase (Dus) EZ55_03404 PF00691 OmpA family EZ55_03404 PF01389 OmpA-like transmembrane domain EZ55_03405 PF05362 Lon protease (S16) C-terminal proteolytic domain EZ55_03405 PF02190 ATP-dependent protease La (LON) substrate-binding domain EZ55_03405 PF00004 ATPase family associated with various cellular activities (AAA) EZ55_03406 PF00563 EAL domain EZ55_03406 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03406 PF03707 Bacterial signalling protein N terminal repeat EZ55_03409 PF00756 Putative esterase EZ55_03410 PF01553 Acyltransferase EZ55_03411 PF01553 Acyltransferase EZ55_03412 PF00924 Mechanosensitive ion channel EZ55_03415 PF01370 NAD dependent epimerase/dehydratase family EZ55_03416 PF00209 Sodium:neurotransmitter symporter family EZ55_03419 PF01625 Peptide methionine sulfoxide reductase EZ55_03422 PF00258 Flavodoxin EZ55_03424 PF02472 Biopolymer transport protein ExbD/TolR EZ55_03426 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) EZ55_03426 PF13181 Tetratricopeptide repeat EZ55_03427 PF01270 Glycosyl hydrolases family 8 EZ55_03429 PF07238 PilZ domain EZ55_03429 PF03170 Bacterial cellulose synthase subunit EZ55_03429 PF03552 Cellulose synthase EZ55_03429 PF00535 Glycosyl transferase family 2 EZ55_03432 PF05175 Methyltransferase small domain EZ55_03433 PF13460 NAD(P)H-binding EZ55_03434 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EZ55_03434 PF00326 Prolyl oligopeptidase family EZ55_03435 PF08000 Bacterial PH domain EZ55_03436 PF00563 EAL domain EZ55_03436 PF08448 PAS fold EZ55_03436 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03437 PF00291 Pyridoxal-phosphate dependent enzyme EZ55_03438 PF07969 Amidohydrolase family EZ55_03441 PF00753 Metallo-beta-lactamase superfamily EZ55_03443 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_03443 PF03466 LysR substrate binding domain EZ55_03444 PF13230 Glutamine amidotransferases class-II EZ55_03447 PF05360 yiaA/B two helix domain EZ55_03451 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EZ55_03452 PF07715 TonB-dependent Receptor Plug Domain EZ55_03452 PF00593 TonB dependent receptor EZ55_03453 PF00171 Aldehyde dehydrogenase family EZ55_03454 PF01613 Flavin reductase like domain EZ55_03455 PF00881 Nitroreductase family EZ55_03456 PF00561 alpha/beta hydrolase fold EZ55_03457 PF01042 Endoribonuclease L-PSP EZ55_03458 PF00857 Isochorismatase family EZ55_03459 PF00296 Luciferase-like monooxygenase EZ55_03460 PF00440 Bacterial regulatory proteins, tetR family EZ55_03460 PF08362 YcdC-like protein, C-terminal region EZ55_03463 PF09905 DNA-binding protein VF530 EZ55_03464 PF02447 GntP family permease EZ55_03466 PF00356 Bacterial regulatory proteins, lacI family EZ55_03467 PF16123 Hydroxyacylglutathione hydrolase C-terminus EZ55_03467 PF00753 Metallo-beta-lactamase superfamily EZ55_03469 PF00817 impB/mucB/samB family EZ55_03469 PF11799 impB/mucB/samB family C-terminal domain EZ55_03469 PF11798 IMS family HHH motif EZ55_03470 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH EZ55_03473 PF02424 ApbE family EZ55_03474 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_03474 PF00970 Oxidoreductase FAD-binding domain EZ55_03474 PF00175 Oxidoreductase NAD-binding domain EZ55_03475 PF02508 Rnf-Nqr subunit, membrane protein EZ55_03476 PF02508 Rnf-Nqr subunit, membrane protein EZ55_03477 PF04205 FMN-binding domain EZ55_03478 PF03116 NQR2, RnfD, RnfE family EZ55_03479 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) EZ55_03479 PF11973 NQRA C-terminal domain EZ55_03480 PF07055 Enoyl reductase FAD binding domain EZ55_03480 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EZ55_03480 PF12241 Trans-2-enoyl-CoA reductase catalytic region EZ55_03481 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EZ55_03481 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EZ55_03482 PF00311 Phosphoenolpyruvate carboxylase EZ55_03483 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EZ55_03483 PF00056 lactate/malate dehydrogenase, NAD binding domain EZ55_03484 PF02863 Arginine repressor, C-terminal domain EZ55_03484 PF01316 Arginine repressor, DNA binding domain EZ55_03486 PF00593 TonB dependent receptor EZ55_03489 PF00485 Phosphoribulokinase / Uridine kinase family EZ55_03490 PF07670 Nucleoside recognition EZ55_03490 PF01773 Na+ dependent nucleoside transporter N-terminus EZ55_03490 PF07662 Na+ dependent nucleoside transporter C-terminus EZ55_03493 PF02469 Fasciclin domain EZ55_03495 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03495 PF00072 Response regulator receiver domain EZ55_03497 PF00478 IMP dehydrogenase / GMP reductase domain EZ55_03497 PF00571 CBS domain EZ55_03498 PF00474 Sodium:solute symporter family EZ55_03500 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03500 PF18415 Histidine kinase receptor ArcB trans-membrane domain EZ55_03502 PF08443 RimK-like ATP-grasp domain EZ55_03502 PF18030 RimK PreATP-grasp domain EZ55_03504 PF18030 RimK PreATP-grasp domain EZ55_03504 PF08443 RimK-like ATP-grasp domain EZ55_03506 PF00196 Bacterial regulatory proteins, luxR family EZ55_03506 PF00072 Response regulator receiver domain EZ55_03507 PF00501 AMP-binding enzyme EZ55_03507 PF13193 AMP-binding enzyme C-terminal domain EZ55_03507 PF16177 Acetyl-coenzyme A synthetase N-terminus EZ55_03509 PF02690 Na+/Pi-cotransporter EZ55_03510 PF00248 Aldo/keto reductase family EZ55_03512 PF00082 Subtilase family EZ55_03515 PF00069 Protein kinase domain EZ55_03516 PF07730 Histidine kinase EZ55_03516 PF17200 Single Cache domain 2 EZ55_03517 PF00196 Bacterial regulatory proteins, luxR family EZ55_03517 PF00072 Response regulator receiver domain EZ55_03519 PF00082 Subtilase family EZ55_03522 PF00199 Catalase EZ55_03522 PF06628 Catalase-related immune-responsive EZ55_03525 PF00563 EAL domain EZ55_03525 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03525 PF08447 PAS fold EZ55_03525 PF08448 PAS fold EZ55_03526 PF03144 Elongation factor Tu domain 2 EZ55_03526 PF00009 Elongation factor Tu GTP binding domain EZ55_03526 PF03143 Elongation factor Tu C-terminal domain EZ55_03531 PF03309 Type III pantothenate kinase EZ55_03532 PF02237 Biotin protein ligase C terminal domain EZ55_03532 PF03099 Biotin/lipoate A/B protein ligase family EZ55_03532 PF08279 HTH domain EZ55_03533 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EZ55_03533 PF01565 FAD binding domain EZ55_03534 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_03534 PF00672 HAMP domain EZ55_03534 PF12729 Four helix bundle sensory module for signal transduction EZ55_03542 PF00664 ABC transporter transmembrane region EZ55_03542 PF00005 ABC transporter EZ55_03542 PF03412 Peptidase C39 family EZ55_03543 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_03543 PF03466 LysR substrate binding domain EZ55_03548 PF01050 Mannose-6-phosphate isomerase EZ55_03548 PF00483 Nucleotidyl transferase EZ55_03549 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EZ55_03549 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EZ55_03549 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EZ55_03550 PF00535 Glycosyl transferase family 2 EZ55_03551 PF16363 GDP-mannose 4,6 dehydratase EZ55_03552 PF04321 RmlD substrate binding domain EZ55_03553 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EZ55_03554 PF00483 Nucleotidyl transferase EZ55_03555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EZ55_03555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EZ55_03555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EZ55_03555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EZ55_03556 PF01380 SIS domain EZ55_03557 PF01380 SIS domain EZ55_03558 PF01380 SIS domain EZ55_03563 PF00535 Glycosyl transferase family 2 EZ55_03564 PF08666 SAF domain EZ55_03564 PF03102 NeuB family EZ55_03567 PF02348 Cytidylyltransferase EZ55_03568 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EZ55_03569 PF02719 Polysaccharide biosynthesis protein EZ55_03573 PF01196 Ribosomal protein L17 EZ55_03574 PF01000 RNA polymerase Rpb3/RpoA insert domain EZ55_03574 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EZ55_03574 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EZ55_03575 PF00163 Ribosomal protein S4/S9 N-terminal domain EZ55_03575 PF01479 S4 domain EZ55_03576 PF00411 Ribosomal protein S11 EZ55_03577 PF00416 Ribosomal protein S13/S18 EZ55_03579 PF00444 Ribosomal protein L36 EZ55_03580 PF00344 SecY translocase EZ55_03581 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EZ55_03582 PF00327 Ribosomal protein L30p/L7e EZ55_03583 PF00333 Ribosomal protein S5, N-terminal domain EZ55_03583 PF03719 Ribosomal protein S5, C-terminal domain EZ55_03584 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EZ55_03585 PF00347 Ribosomal protein L6 EZ55_03586 PF00410 Ribosomal protein S8 EZ55_03587 PF00253 Ribosomal protein S14p/S29e EZ55_03588 PF00673 ribosomal L5P family C-terminus EZ55_03588 PF00281 Ribosomal protein L5 EZ55_03589 PF00467 KOW motif EZ55_03589 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EZ55_03590 PF00238 Ribosomal protein L14p/L23e EZ55_03591 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03591 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03591 PF09308 LuxQ, periplasmic EZ55_03591 PF00072 Response regulator receiver domain EZ55_03593 PF05922 Peptidase inhibitor I9 EZ55_03593 PF00082 Subtilase family EZ55_03594 PF00588 SpoU rRNA Methylase family EZ55_03594 PF08032 RNA 2'-O ribose methyltransferase substrate binding EZ55_03595 PF17876 Cold shock domain EZ55_03595 PF08461 Ribonuclease R winged-helix domain EZ55_03595 PF08206 Ribonuclease B OB domain EZ55_03595 PF00773 RNB domain EZ55_03595 PF00575 S1 RNA binding domain EZ55_03598 PF16655 PhoD-like phosphatase, N-terminal domain EZ55_03598 PF09423 PhoD-like phosphatase EZ55_03601 PF07715 TonB-dependent Receptor Plug Domain EZ55_03601 PF00593 TonB dependent receptor EZ55_03604 PF08238 Sel1 repeat EZ55_03606 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EZ55_03607 PF00175 Oxidoreductase NAD-binding domain EZ55_03608 PF04389 Peptidase family M28 EZ55_03610 PF00360 Phytochrome region EZ55_03610 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03610 PF08446 PAS fold EZ55_03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03610 PF01590 GAF domain EZ55_03614 PF01654 Cytochrome bd terminal oxidase subunit I EZ55_03615 PF02322 Cytochrome bd terminal oxidase subunit II EZ55_03617 PF13404 AsnC-type helix-turn-helix domain EZ55_03617 PF01037 Lrp/AsnC ligand binding domain EZ55_03620 PF00313 'Cold-shock' DNA-binding domain EZ55_03621 PF03109 ABC1 family EZ55_03623 PF01209 ubiE/COQ5 methyltransferase family EZ55_03625 PF01432 Peptidase family M3 EZ55_03626 PF00072 Response regulator receiver domain EZ55_03628 PF00072 Response regulator receiver domain EZ55_03628 PF08448 PAS fold EZ55_03628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03628 PF13188 PAS domain EZ55_03628 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03629 PF00158 Sigma-54 interaction domain EZ55_03629 PF00072 Response regulator receiver domain EZ55_03629 PF02954 Bacterial regulatory protein, Fis family EZ55_03630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EZ55_03630 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_03631 PF00384 Molybdopterin oxidoreductase EZ55_03631 PF01568 Molydopterin dinucleotide binding domain EZ55_03631 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EZ55_03632 PF07715 TonB-dependent Receptor Plug Domain EZ55_03632 PF00593 TonB dependent receptor EZ55_03634 PF07676 WD40-like Beta Propeller Repeat EZ55_03634 PF00326 Prolyl oligopeptidase family EZ55_03645 PF03412 Peptidase C39 family EZ55_03645 PF00664 ABC transporter transmembrane region EZ55_03645 PF00005 ABC transporter EZ55_03646 PF00072 Response regulator receiver domain EZ55_03646 PF00196 Bacterial regulatory proteins, luxR family EZ55_03651 PF01609 Transposase DDE domain EZ55_03651 PF13006 Insertion element 4 transposase N-terminal EZ55_03652 PF00004 ATPase family associated with various cellular activities (AAA) EZ55_03652 PF07724 AAA domain (Cdc48 subfamily) EZ55_03653 PF00227 Proteasome subunit EZ55_03654 PF00313 'Cold-shock' DNA-binding domain EZ55_03656 PF05036 Sporulation related domain EZ55_03657 PF18074 Primosomal protein N C-terminal domain EZ55_03657 PF00270 DEAD/DEAH box helicase EZ55_03657 PF00271 Helicase conserved C-terminal domain EZ55_03657 PF17764 3′ DNA-binding domain (3′BD) EZ55_03657 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EZ55_03658 PF01197 Ribosomal protein L31 EZ55_03660 PF00390 Malic enzyme, N-terminal domain EZ55_03660 PF03949 Malic enzyme, NAD binding domain EZ55_03661 PF01340 Met Apo-repressor, MetJ EZ55_03662 PF02219 Methylenetetrahydrofolate reductase EZ55_03663 PF03631 Virulence factor BrkB EZ55_03666 PF00561 alpha/beta hydrolase fold EZ55_03667 PF02580 D-Tyr-tRNA(Tyr) deacylase EZ55_03668 PF00583 Acetyltransferase (GNAT) family EZ55_03668 PF09500 Putative thioesterase (yiiD_Cterm) EZ55_03669 PF04542 Sigma-70 region 2 EZ55_03669 PF00140 Sigma-70 factor, region 1.2 EZ55_03669 PF04545 Sigma-70, region 4 EZ55_03670 PF08668 HDOD domain EZ55_03670 PF00563 EAL domain EZ55_03671 PF00563 EAL domain EZ55_03671 PF08668 HDOD domain EZ55_03672 PF18075 FtsX extracellular domain EZ55_03673 PF00005 ABC transporter EZ55_03674 PF00448 SRP54-type protein, GTPase domain EZ55_03674 PF02881 SRP54-type protein, helical bundle domain EZ55_03677 PF01914 MarC family integral membrane protein EZ55_03679 PF12404 Peptidase EZ55_03679 PF00883 Cytosol aminopeptidase family, catalytic domain EZ55_03680 PF03749 Sugar fermentation stimulation protein RE domain EZ55_03680 PF17746 SfsA N-terminal OB domain EZ55_03681 PF01258 Prokaryotic dksA/traR C4-type zinc finger EZ55_03682 PF00749 tRNA synthetases class I (E and Q), catalytic domain EZ55_03683 PF01743 Poly A polymerase head domain EZ55_03683 PF12626 Polymerase A arginine-rich C-terminus EZ55_03683 PF12627 Probable RNA and SrmB- binding site of polymerase A EZ55_03684 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EZ55_03685 PF02548 Ketopantoate hydroxymethyltransferase EZ55_03686 PF02569 Pantoate-beta-alanine ligase EZ55_03687 PF00282 Pyridoxal-dependent decarboxylase conserved domain EZ55_03690 PF01061 ABC-2 type transporter EZ55_03691 PF00005 ABC transporter EZ55_03692 PF00072 Response regulator receiver domain EZ55_03692 PF00486 Transcriptional regulatory protein, C terminal EZ55_03693 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03693 PF00672 HAMP domain EZ55_03693 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03694 PF02371 Transposase IS116/IS110/IS902 family EZ55_03694 PF01548 Transposase EZ55_03698 PF00571 CBS domain EZ55_03698 PF01595 Cyclin M transmembrane N-terminal domain EZ55_03699 PF03773 Predicted permease EZ55_03700 PF02554 Carbon starvation protein CstA EZ55_03700 PF13722 5TM C-terminal transporter carbon starvation CstA EZ55_03701 PF00175 Oxidoreductase NAD-binding domain EZ55_03701 PF00258 Flavodoxin EZ55_03701 PF00667 FAD binding domain EZ55_03710 PF02472 Biopolymer transport protein ExbD/TolR EZ55_03712 PF01618 MotA/TolQ/ExbB proton channel family EZ55_03714 PF00593 TonB dependent receptor EZ55_03714 PF07715 TonB-dependent Receptor Plug Domain EZ55_03715 PF01070 FMN-dependent dehydrogenase EZ55_03716 PF18331 PKHD-type hydroxylase C-terminal domain EZ55_03716 PF13640 2OG-Fe(II) oxygenase superfamily EZ55_03717 PF07715 TonB-dependent Receptor Plug Domain EZ55_03717 PF00593 TonB dependent receptor EZ55_03718 PF07859 alpha/beta hydrolase fold EZ55_03720 PF03144 Elongation factor Tu domain 2 EZ55_03720 PF00009 Elongation factor Tu GTP binding domain EZ55_03720 PF03143 Elongation factor Tu C-terminal domain EZ55_03721 PF00009 Elongation factor Tu GTP binding domain EZ55_03721 PF03764 Elongation factor G, domain IV EZ55_03721 PF14492 Elongation Factor G, domain II EZ55_03721 PF00679 Elongation factor G C-terminus EZ55_03721 PF03144 Elongation factor Tu domain 2 EZ55_03722 PF00177 Ribosomal protein S7p/S5e EZ55_03723 PF00164 Ribosomal protein S12/S23 EZ55_03724 PF04997 RNA polymerase Rpb1, domain 1 EZ55_03724 PF00623 RNA polymerase Rpb1, domain 2 EZ55_03724 PF04983 RNA polymerase Rpb1, domain 3 EZ55_03724 PF05000 RNA polymerase Rpb1, domain 4 EZ55_03724 PF04998 RNA polymerase Rpb1, domain 5 EZ55_03725 PF00562 RNA polymerase Rpb2, domain 6 EZ55_03725 PF10385 RNA polymerase beta subunit external 1 domain EZ55_03725 PF04565 RNA polymerase Rpb2, domain 3 EZ55_03725 PF04561 RNA polymerase Rpb2, domain 2 EZ55_03725 PF04563 RNA polymerase beta subunit EZ55_03725 PF04560 RNA polymerase Rpb2, domain 7 EZ55_03726 PF16320 Ribosomal protein L7/L12 dimerisation domain EZ55_03726 PF00542 Ribosomal protein L7/L12 C-terminal domain EZ55_03727 PF00466 Ribosomal protein L10 EZ55_03728 PF00687 Ribosomal protein L1p/L10e family EZ55_03729 PF00298 Ribosomal protein L11, RNA binding domain EZ55_03729 PF03946 Ribosomal protein L11, N-terminal domain EZ55_03732 PF02357 Transcription termination factor nusG EZ55_03732 PF00467 KOW motif EZ55_03733 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EZ55_03735 PF00005 ABC transporter EZ55_03735 PF00664 ABC transporter transmembrane region EZ55_03736 PF03737 Aldolase/RraA EZ55_03737 PF01431 Peptidase family M13 EZ55_03737 PF05649 Peptidase family M13 EZ55_03740 PF03880 DbpA RNA binding domain EZ55_03740 PF00270 DEAD/DEAH box helicase EZ55_03740 PF00271 Helicase conserved C-terminal domain EZ55_03742 PF01979 Amidohydrolase family EZ55_03743 PF08212 Lipocalin-like domain EZ55_03744 PF00248 Aldo/keto reductase family EZ55_03745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EZ55_03746 PF05552 Conserved TM helix EZ55_03746 PF00924 Mechanosensitive ion channel EZ55_03747 PF07690 Major Facilitator Superfamily EZ55_03748 PF00128 Alpha amylase, catalytic domain EZ55_03751 PF01227 GTP cyclohydrolase I EZ55_03753 PF04371 Porphyromonas-type peptidyl-arginine deiminase EZ55_03754 PF00795 Carbon-nitrogen hydrolase EZ55_03756 PF00270 DEAD/DEAH box helicase EZ55_03756 PF08494 DEAD/H associated EZ55_03756 PF00271 Helicase conserved C-terminal domain EZ55_03757 PF04235 Protein of unknown function (DUF418) EZ55_03760 PF04675 DNA ligase N terminus EZ55_03760 PF04679 ATP dependent DNA ligase C terminal region EZ55_03760 PF01068 ATP dependent DNA ligase domain EZ55_03761 PF01132 Elongation factor P (EF-P) OB domain EZ55_03761 PF08207 Elongation factor P (EF-P) KOW-like domain EZ55_03761 PF09285 Elongation factor P, C-terminal EZ55_03762 PF00294 pfkB family carbohydrate kinase EZ55_03766 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_03767 PF00043 Glutathione S-transferase, C-terminal domain EZ55_03767 PF02798 Glutathione S-transferase, N-terminal domain EZ55_03768 PF02798 Glutathione S-transferase, N-terminal domain EZ55_03770 PF00561 alpha/beta hydrolase fold EZ55_03773 PF00171 Aldehyde dehydrogenase family EZ55_03774 PF00205 Thiamine pyrophosphate enzyme, central domain EZ55_03774 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EZ55_03774 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EZ55_03776 PF00762 Ferrochelatase EZ55_03777 PF03806 AbgT putative transporter family EZ55_03778 PF01145 SPFH domain / Band 7 family EZ55_03779 PF01145 SPFH domain / Band 7 family EZ55_03779 PF12221 Bacterial membrane protein N terminal EZ55_03780 PF16360 GTP-binding GTPase Middle Region EZ55_03780 PF13167 GTP-binding GTPase N-terminal EZ55_03780 PF01926 50S ribosome-binding GTPase EZ55_03781 PF17209 Hfq protein EZ55_03783 PF01119 DNA mismatch repair protein, C-terminal domain EZ55_03783 PF08676 MutL C terminal dimerisation domain EZ55_03784 PF01520 N-acetylmuramoyl-L-alanine amidase EZ55_03785 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EZ55_03786 PF01256 Carbohydrate kinase EZ55_03786 PF03853 YjeF-related protein N-terminus EZ55_03787 PF08331 Domain of unknown function (DUF1730) EZ55_03789 PF01208 Uroporphyrinogen decarboxylase (URO-D) EZ55_03790 PF09297 NADH pyrophosphatase zinc ribbon domain EZ55_03790 PF00293 NUDIX domain EZ55_03791 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ EZ55_03792 PF01475 Ferric uptake regulator family EZ55_03794 PF01894 Uncharacterised protein family UPF0047 EZ55_03795 PF00691 OmpA family EZ55_03795 PF05736 OprF membrane domain EZ55_03796 PF00772 DnaB-like helicase N terminal domain EZ55_03796 PF03796 DnaB-like helicase C terminal domain EZ55_03801 PF03475 3-alpha domain EZ55_03801 PF03473 MOSC domain EZ55_03803 PF00072 Response regulator receiver domain EZ55_03803 PF00486 Transcriptional regulatory protein, C terminal EZ55_03804 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03804 PF00672 HAMP domain EZ55_03804 PF16750 Sensor domain of 2-component histidine kinase EZ55_03808 PF00873 AcrB/AcrD/AcrF family EZ55_03809 PF03948 Ribosomal protein L9, C-terminal domain EZ55_03809 PF01281 Ribosomal protein L9, N-terminal domain EZ55_03810 PF01084 Ribosomal protein S18 EZ55_03811 PF01250 Ribosomal protein S6 EZ55_03813 PF00005 ABC transporter EZ55_03815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_03815 PF08447 PAS fold EZ55_03816 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03816 PF00497 Bacterial extracellular solute-binding proteins, family 3 EZ55_03817 PF02743 Cache domain EZ55_03817 PF00672 HAMP domain EZ55_03817 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_03820 PF03601 Conserved hypothetical protein 698 EZ55_03821 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EZ55_03822 PF00248 Aldo/keto reductase family EZ55_03826 PF00474 Sodium:solute symporter family EZ55_03827 PF00593 TonB dependent receptor EZ55_03827 PF07715 TonB-dependent Receptor Plug Domain EZ55_03828 PF16916 Dimerisation domain of Zinc Transporter EZ55_03828 PF01545 Cation efflux family EZ55_03829 PF00722 Glycosyl hydrolases family 16 EZ55_03831 PF08448 PAS fold EZ55_03831 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03832 PF03553 Na+/H+ antiporter family EZ55_03833 PF00933 Glycosyl hydrolase family 3 N terminal domain EZ55_03833 PF01915 Glycosyl hydrolase family 3 C-terminal domain EZ55_03833 PF14310 Fibronectin type III-like domain EZ55_03834 PF07690 Major Facilitator Superfamily EZ55_03835 PF00232 Glycosyl hydrolase family 1 EZ55_03836 PF00356 Bacterial regulatory proteins, lacI family EZ55_03837 PF00083 Sugar (and other) transporter EZ55_03838 PF00664 ABC transporter transmembrane region EZ55_03838 PF00005 ABC transporter EZ55_03839 PF00664 ABC transporter transmembrane region EZ55_03839 PF00005 ABC transporter EZ55_03840 PF08173 Membrane bound YbgT-like protein EZ55_03841 PF02322 Cytochrome bd terminal oxidase subunit II EZ55_03842 PF01654 Cytochrome bd terminal oxidase subunit I EZ55_03844 PF02954 Bacterial regulatory protein, Fis family EZ55_03844 PF00072 Response regulator receiver domain EZ55_03844 PF00158 Sigma-54 interaction domain EZ55_03849 PF13474 SnoaL-like domain EZ55_03851 PF07715 TonB-dependent Receptor Plug Domain EZ55_03851 PF00593 TonB dependent receptor EZ55_03854 PF02649 Type I GTP cyclohydrolase folE2 EZ55_03865 PF05532 CsbD-like EZ55_03868 PF04542 Sigma-70 region 2 EZ55_03868 PF08281 Sigma-70, region 4 EZ55_03873 PF00472 RF-1 domain EZ55_03874 PF00364 Biotin-requiring enzyme EZ55_03874 PF00561 alpha/beta hydrolase fold EZ55_03879 PF01292 Prokaryotic cytochrome b561 EZ55_03880 PF04264 YceI-like domain EZ55_03881 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_03882 PF07715 TonB-dependent Receptor Plug Domain EZ55_03882 PF00593 TonB dependent receptor EZ55_03884 PF01048 Phosphorylase superfamily EZ55_03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_03885 PF03466 LysR substrate binding domain EZ55_03886 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EZ55_03887 PF16884 N-terminal domain of oxidoreductase EZ55_03887 PF00107 Zinc-binding dehydrogenase EZ55_03888 PF00563 EAL domain EZ55_03888 PF00360 Phytochrome region EZ55_03888 PF00990 Diguanylate cyclase, GGDEF domain EZ55_03888 PF01590 GAF domain EZ55_03889 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03889 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03889 PF00072 Response regulator receiver domain EZ55_03889 PF09308 LuxQ, periplasmic EZ55_03891 PF00296 Luciferase-like monooxygenase EZ55_03892 PF01380 SIS domain EZ55_03893 PF00455 DeoR C terminal sensor domain EZ55_03893 PF08220 DeoR-like helix-turn-helix domain EZ55_03894 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EZ55_03894 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EZ55_03895 PF00132 Bacterial transferase hexapeptide (six repeats) EZ55_03895 PF14602 Hexapeptide repeat of succinyl-transferase EZ55_03895 PF12804 MobA-like NTP transferase domain EZ55_03897 PF00892 EamA-like transporter family EZ55_03898 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EZ55_03898 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EZ55_03899 PF00730 HhH-GPD superfamily base excision DNA repair protein EZ55_03899 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain EZ55_03900 PF00144 Beta-lactamase EZ55_03901 PF17810 Arginine decarboxylase helical bundle domain EZ55_03901 PF17944 Arginine decarboxylase C-terminal helical extension EZ55_03901 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EZ55_03903 PF02233 NAD(P) transhydrogenase beta subunit EZ55_03904 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EZ55_03905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EZ55_03905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EZ55_03907 PF04820 Tryptophan halogenase EZ55_03913 PF00593 TonB dependent receptor EZ55_03913 PF07715 TonB-dependent Receptor Plug Domain EZ55_03921 PF01040 UbiA prenyltransferase family EZ55_03922 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EZ55_03923 PF00510 Cytochrome c oxidase subunit III EZ55_03924 PF00115 Cytochrome C and Quinol oxidase polypeptide I EZ55_03925 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EZ55_03925 PF06481 COX Aromatic Rich Motif EZ55_03930 PF00544 Pectate lyase EZ55_03933 PF00872 Transposase, Mutator family EZ55_03938 PF00118 TCP-1/cpn60 chaperonin family EZ55_03939 PF00166 Chaperonin 10 Kd subunit EZ55_03941 PF03091 CutA1 divalent ion tolerance protein EZ55_03942 PF02683 Cytochrome C biogenesis protein transmembrane region EZ55_03942 PF11412 Disulphide bond corrector protein DsbC EZ55_03943 PF01551 Peptidase family M23 EZ55_03944 PF01220 Dehydroquinase class II EZ55_03945 PF00364 Biotin-requiring enzyme EZ55_03946 PF00289 Biotin carboxylase, N-terminal domain EZ55_03946 PF02785 Biotin carboxylase C-terminal domain EZ55_03946 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EZ55_03950 PF07733 Bacterial DNA polymerase III alpha NTPase domain EZ55_03950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EZ55_03950 PF14579 Helix-hairpin-helix motif EZ55_03950 PF02811 PHP domain EZ55_03950 PF00929 Exonuclease EZ55_03950 PF11490 DNA polymerase III polC-type N-terminus II EZ55_03953 PF01355 High potential iron-sulfur protein EZ55_03954 PF01425 Amidase EZ55_03957 PF01207 Dihydrouridine synthase (Dus) EZ55_03958 PF02954 Bacterial regulatory protein, Fis family EZ55_03959 PF01808 AICARFT/IMPCHase bienzyme EZ55_03959 PF02142 MGS-like domain EZ55_03961 PF02844 Phosphoribosylglycinamide synthetase, N domain EZ55_03961 PF02843 Phosphoribosylglycinamide synthetase, C domain EZ55_03961 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EZ55_03964 PF00027 Cyclic nucleotide-binding domain EZ55_03964 PF00520 Ion transport protein EZ55_03965 PF00485 Phosphoribulokinase / Uridine kinase family EZ55_03967 PF00072 Response regulator receiver domain EZ55_03967 PF00486 Transcriptional regulatory protein, C terminal EZ55_03968 PF00672 HAMP domain EZ55_03968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_03968 PF00512 His Kinase A (phospho-acceptor) domain EZ55_03970 PF16338 Domain of unknown function (DUF4968) EZ55_03970 PF17137 Domain of unknown function (DUF5110) EZ55_03970 PF13802 Galactose mutarotase-like EZ55_03970 PF01055 Glycosyl hydrolases family 31 EZ55_03971 PF01293 Phosphoenolpyruvate carboxykinase EZ55_03972 PF01430 Hsp33 protein EZ55_03973 PF01479 S4 domain EZ55_03974 PF11356 Type II secretion system protein C EZ55_03975 PF03958 Bacterial type II/III secretion system short domain EZ55_03975 PF00263 Bacterial type II and III secretion system protein EZ55_03976 PF00437 Type II/IV secretion system protein EZ55_03977 PF00482 Type II secretion system (T2SS), protein F EZ55_03978 PF07963 Prokaryotic N-terminal methylation motif EZ55_03978 PF08334 Type II secretion system (T2SS), protein G EZ55_03979 PF12019 Type II transport protein GspH EZ55_03980 PF07963 Prokaryotic N-terminal methylation motif EZ55_03980 PF02501 Type II secretion system (T2SS), protein I EZ55_03981 PF07963 Prokaryotic N-terminal methylation motif EZ55_03981 PF11612 Type II secretion system (T2SS), protein J EZ55_03983 PF12693 GspL periplasmic domain EZ55_03983 PF05134 Type II secretion system (T2SS), protein L EZ55_03984 PF04612 Type II secretion system (T2SS), protein M EZ55_03987 PF12706 Beta-lactamase superfamily domain EZ55_03988 PF00171 Aldehyde dehydrogenase family EZ55_03989 PF01931 Protein of unknown function DUF84 EZ55_03990 PF13419 Haloacid dehalogenase-like hydrolase EZ55_03991 PF00293 NUDIX domain EZ55_03992 PF00459 Inositol monophosphatase family EZ55_03994 PF00535 Glycosyl transferase family 2 EZ55_03995 PF04349 Periplasmic glucan biosynthesis protein, MdoG EZ55_03997 PF06794 Uncharacterised protein family (UPF0270) EZ55_03998 PF00561 alpha/beta hydrolase fold EZ55_04000 PF12848 ABC transporter EZ55_04000 PF00005 ABC transporter EZ55_04004 PF04102 SlyX EZ55_04006 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EZ55_04006 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EZ55_04008 PF01272 Transcription elongation factor, GreA/GreB, C-term EZ55_04008 PF03449 Transcription elongation factor, N-terminal EZ55_04009 PF17674 HHH domain EZ55_04009 PF00575 S1 RNA binding domain EZ55_04009 PF09371 Tex-like protein N-terminal domain EZ55_04009 PF16921 Tex protein YqgF-like domain EZ55_04010 PF04820 Tryptophan halogenase EZ55_04014 PF12833 Helix-turn-helix domain EZ55_04016 PF04616 Glycosyl hydrolases family 43 EZ55_04020 PF00331 Glycosyl hydrolase family 10 EZ55_04020 PF03422 Carbohydrate binding module (family 6) EZ55_04020 PF00553 Cellulose binding domain EZ55_04021 PF00248 Aldo/keto reductase family EZ55_04022 PF00456 Transketolase, thiamine diphosphate binding domain EZ55_04022 PF02780 Transketolase, C-terminal domain EZ55_04022 PF02779 Transketolase, pyrimidine binding domain EZ55_04024 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EZ55_04024 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EZ55_04025 PF00923 Transaldolase/Fructose-6-phosphate aldolase EZ55_04027 PF01915 Glycosyl hydrolase family 3 C-terminal domain EZ55_04027 PF00933 Glycosyl hydrolase family 3 N terminal domain EZ55_04027 PF14310 Fibronectin type III-like domain EZ55_04028 PF00083 Sugar (and other) transporter EZ55_04032 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EZ55_04036 PF00561 alpha/beta hydrolase fold EZ55_04037 PF00156 Phosphoribosyl transferase domain EZ55_04039 PF01521 Iron-sulphur cluster biosynthesis EZ55_04039 PF01106 NifU-like domain EZ55_04040 PF01177 Asp/Glu/Hydantoin racemase EZ55_04043 PF01554 MatE EZ55_04046 PF02630 SCO1/SenC EZ55_04047 PF01040 UbiA prenyltransferase family EZ55_04048 PF02628 Cytochrome oxidase assembly protein EZ55_04052 PF00510 Cytochrome c oxidase subunit III EZ55_04053 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EZ55_04054 PF00115 Cytochrome C and Quinol oxidase polypeptide I EZ55_04055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EZ55_04055 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EZ55_04056 PF01726 LexA DNA binding domain EZ55_04056 PF00717 Peptidase S24-like EZ55_04058 PF17151 Periplasmic sensor domain EZ55_04058 PF00990 Diguanylate cyclase, GGDEF domain EZ55_04059 PF01553 Acyltransferase EZ55_04060 PF00291 Pyridoxal-phosphate dependent enzyme EZ55_04060 PF00585 C-terminal regulatory domain of Threonine dehydratase EZ55_04061 PF00920 Dehydratase family EZ55_04062 PF03458 UPF0126 domain EZ55_04063 PF01078 Magnesium chelatase, subunit ChlI EZ55_04063 PF13335 Magnesium chelatase, subunit ChlI C-terminal EZ55_04064 PF03466 LysR substrate binding domain EZ55_04064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EZ55_04065 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EZ55_04065 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EZ55_04066 PF07690 Major Facilitator Superfamily EZ55_04067 PF00326 Prolyl oligopeptidase family EZ55_04068 PF01103 Surface antigen EZ55_04068 PF07244 Surface antigen variable number repeat EZ55_04068 PF17243 POTRA domain TamA domain 1 EZ55_04069 PF04357 TamB, inner membrane protein subunit of TAM complex EZ55_04074 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EZ55_04074 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EZ55_04076 PF01472 PUA domain EZ55_04076 PF00696 Amino acid kinase family EZ55_04081 PF03109 ABC1 family EZ55_04086 PF01979 Amidohydrolase family EZ55_04090 PF01206 Sulfurtransferase TusA EZ55_04091 PF00156 Phosphoribosyl transferase domain EZ55_04092 PF01138 3' exoribonuclease family, domain 1 EZ55_04092 PF03725 3' exoribonuclease family, domain 2 EZ55_04093 PF03755 YicC-like family, N-terminal region EZ55_04093 PF08340 Domain of unknown function (DUF1732) EZ55_04094 PF01381 Helix-turn-helix EZ55_04096 PF04820 Tryptophan halogenase EZ55_04097 PF04820 Tryptophan halogenase EZ55_04099 PF00232 Glycosyl hydrolase family 1 EZ55_04101 PF00356 Bacterial regulatory proteins, lacI family EZ55_04104 PF00691 OmpA family EZ55_04104 PF05736 OprF membrane domain EZ55_04105 PF01966 HD domain EZ55_04108 PF00043 Glutathione S-transferase, C-terminal domain EZ55_04108 PF02798 Glutathione S-transferase, N-terminal domain EZ55_04110 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EZ55_04110 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EZ55_04111 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EZ55_04111 PF02874 ATP synthase alpha/beta family, beta-barrel domain EZ55_04112 PF00231 ATP synthase EZ55_04113 PF02874 ATP synthase alpha/beta family, beta-barrel domain EZ55_04113 PF00306 ATP synthase alpha/beta chain, C terminal domain EZ55_04113 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EZ55_04114 PF00213 ATP synthase delta (OSCP) subunit EZ55_04115 PF00430 ATP synthase B/B' CF(0) EZ55_04116 PF00137 ATP synthase subunit C EZ55_04117 PF00119 ATP synthase A chain EZ55_04119 PF02195 ParB-like nuclease domain EZ55_04119 PF17762 HTH domain found in ParB protein EZ55_04120 PF13614 AAA domain EZ55_04121 PF02527 rRNA small subunit methyltransferase G EZ55_04122 PF13932 GidA associated domain EZ55_04122 PF01134 Glucose inhibited division protein A EZ55_04125 PF00258 Flavodoxin EZ55_04126 PF12631 MnmE helical domain EZ55_04126 PF10396 GTP-binding protein TrmE N-terminus EZ55_04126 PF01926 50S ribosome-binding GTPase EZ55_04127 PF04461 Protein of unknown function (DUF520) EZ55_04128 PF02096 60Kd inner membrane protein EZ55_04128 PF14849 YidC periplasmic domain EZ55_04129 PF01809 Putative membrane protein insertion efficiency factor EZ55_04130 PF00825 Ribonuclease P EZ55_04131 PF00468 Ribosomal protein L34 EZ55_04132 PF13614 AAA domain EZ55_04133 PF17762 HTH domain found in ParB protein EZ55_04133 PF02195 ParB-like nuclease domain EZ55_04144 PF02417 Chromate transporter EZ55_04145 PF09828 Chromate resistance exported protein EZ55_04146 PF01526 Tn3 transposase DDE domain EZ55_04146 PF13700 Domain of unknown function (DUF4158) EZ55_04149 PF00512 His Kinase A (phospho-acceptor) domain EZ55_04149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_04149 PF00672 HAMP domain EZ55_04150 PF00072 Response regulator receiver domain EZ55_04150 PF00486 Transcriptional regulatory protein, C terminal EZ55_04154 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_04155 PF00873 AcrB/AcrD/AcrF family EZ55_04164 PF08031 Berberine and berberine like EZ55_04164 PF01565 FAD binding domain EZ55_04171 PF00970 Oxidoreductase FAD-binding domain EZ55_04171 PF00042 Globin EZ55_04171 PF00175 Oxidoreductase NAD-binding domain EZ55_04175 PF01750 Hydrogenase maturation protease EZ55_04177 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EZ55_04177 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal EZ55_04178 PF00374 Nickel-dependent hydrogenase EZ55_04180 PF01455 HupF/HypC family EZ55_04181 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA EZ55_04182 PF02492 CobW/HypB/UreG, nucleotide-binding domain EZ55_04183 PF01924 Hydrogenase formation hypA family EZ55_04184 PF00708 Acylphosphatase EZ55_04184 PF17788 HypF Kae1-like domain EZ55_04184 PF01300 Telomere recombination EZ55_04184 PF07503 HypF finger EZ55_04185 PF00586 AIR synthase related protein, N-terminal domain EZ55_04185 PF02769 AIR synthase related protein, C-terminal domain EZ55_04187 PF00403 Heavy-metal-associated domain EZ55_04203 PF00551 Formyl transferase EZ55_04203 PF02911 Formyl transferase, C-terminal domain EZ55_04205 PF00376 MerR family regulatory protein EZ55_04205 PF09278 MerR, DNA binding EZ55_04206 PF00403 Heavy-metal-associated domain EZ55_04218 PF07804 HipA-like C-terminal domain EZ55_04218 PF13657 HipA N-terminal domain EZ55_04219 PF01381 Helix-turn-helix EZ55_04223 PF00239 Resolvase, N terminal domain EZ55_04223 PF02796 Helix-turn-helix domain of resolvase EZ55_04237 PF02371 Transposase IS116/IS110/IS902 family EZ55_04237 PF01548 Transposase EZ55_04238 PF05598 Transposase domain (DUF772) EZ55_04238 PF01609 Transposase DDE domain EZ55_04241 PF13333 Integrase core domain EZ55_04241 PF00665 Integrase core domain EZ55_04241 PF13276 HTH-like domain EZ55_04243 PF12833 Helix-turn-helix domain EZ55_04243 PF14525 AraC-binding-like domain EZ55_04244 PF01695 IstB-like ATP binding protein EZ55_04245 PF00665 Integrase core domain EZ55_04246 PF00665 Integrase core domain EZ55_04248 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EZ55_04248 PF00355 Rieske [2Fe-2S] domain EZ55_04249 PF00866 Ring hydroxylating beta subunit EZ55_04250 PF00970 Oxidoreductase FAD-binding domain EZ55_04250 PF00175 Oxidoreductase NAD-binding domain EZ55_04250 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_04251 PF00106 short chain dehydrogenase EZ55_04252 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_04253 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EZ55_04254 PF00171 Aldehyde dehydrogenase family EZ55_04255 PF00561 alpha/beta hydrolase fold EZ55_04257 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation EZ55_04257 PF01118 Semialdehyde dehydrogenase, NAD binding domain EZ55_04258 PF07836 DmpG-like communication domain EZ55_04258 PF00682 HMGL-like EZ55_04260 PF01361 Tautomerase enzyme EZ55_04268 PF01527 Transposase EZ55_04272 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_04275 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_04282 PF00171 Aldehyde dehydrogenase family EZ55_04283 PF00487 Fatty acid desaturase EZ55_04285 PF00111 2Fe-2S iron-sulfur cluster binding domain EZ55_04285 PF00175 Oxidoreductase NAD-binding domain EZ55_04285 PF00970 Oxidoreductase FAD-binding domain EZ55_04286 PF00107 Zinc-binding dehydrogenase EZ55_04286 PF08240 Alcohol dehydrogenase GroES-like domain EZ55_04289 PF00072 Response regulator receiver domain EZ55_04289 PF09308 LuxQ, periplasmic EZ55_04289 PF00512 His Kinase A (phospho-acceptor) domain EZ55_04289 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EZ55_04291 PF13333 Integrase core domain EZ55_04291 PF00665 Integrase core domain EZ55_04291 PF13276 HTH-like domain EZ55_04297 PF02203 Tar ligand binding domain homologue EZ55_04297 PF00672 HAMP domain EZ55_04297 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EZ55_04298 PF00665 Integrase core domain EZ55_04298 PF13333 Integrase core domain EZ55_04298 PF13276 HTH-like domain EZ55_04301 PF00072 Response regulator receiver domain EZ55_04301 PF01339 CheB methylesterase EZ55_04305 PF02796 Helix-turn-helix domain of resolvase EZ55_04305 PF00239 Resolvase, N terminal domain EZ55_04306 PF13700 Domain of unknown function (DUF4158) EZ55_04306 PF01526 Tn3 transposase DDE domain EZ55_04313 PF02417 Chromate transporter EZ55_04314 PF09828 Chromate resistance exported protein EZ55_04315 PF13700 Domain of unknown function (DUF4158) EZ55_04315 PF01526 Tn3 transposase DDE domain EZ55_04320 PF00005 ABC transporter EZ55_04321 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EZ55_04322 PF00403 Heavy-metal-associated domain EZ55_04322 PF07992 Pyridine nucleotide-disulphide oxidoreductase EZ55_04322 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EZ55_04323 PF03203 MerC mercury resistance protein EZ55_04324 PF00403 Heavy-metal-associated domain EZ55_04325 PF02411 MerT mercuric transport protein EZ55_04326 PF00376 MerR family regulatory protein EZ55_04326 PF09278 MerR, DNA binding EZ55_04328 PF13340 Putative transposase of IS4/5 family (DUF4096) EZ55_04332 PF00873 AcrB/AcrD/AcrF family EZ55_04333 PF00529 HlyD membrane-fusion protein of T1SS EZ55_04333 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EZ55_04337 PF13411 MerR HTH family regulatory protein EZ55_04339 PF03527 RHS protein EZ55_04339 PF05593 RHS Repeat EZ55_04344 PF07732 Multicopper oxidase EZ55_04344 PF00394 Multicopper oxidase EZ55_04344 PF07731 Multicopper oxidase EZ55_04346 PF13520 Amino acid permease EZ55_04350 PF00665 Integrase core domain EZ55_04350 PF13276 HTH-like domain EZ55_04350 PF13333 Integrase core domain EZ55_04351 PF00665 Integrase core domain EZ55_04351 PF13276 HTH-like domain EZ55_04351 PF13333 Integrase core domain EZ55_04352 PF01527 Transposase