locus-tag class description MIT1002_00001 PF00308 Bacterial dnaA protein MIT1002_00001 PF08299 Bacterial dnaA protein helix-turn-helix MIT1002_00001 PF11638 DnaA N-terminal domain MIT1002_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain MIT1002_00002 PF02767 DNA polymerase III beta subunit, central domain MIT1002_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain MIT1002_00003 PF02463 RecF/RecN/SMC N terminal domain MIT1002_00004 PF00204 DNA gyrase B MIT1002_00004 PF00986 DNA gyrase B subunit, carboxyl terminus MIT1002_00004 PF18053 DNA gyrase B subunit insert domain MIT1002_00004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00004 PF01751 Toprim domain MIT1002_00006 PF02092 Glycyl-tRNA synthetase beta subunit MIT1002_00006 PF05746 DALR anticodon binding domain MIT1002_00007 PF02091 Glycyl-tRNA synthetase alpha subunit MIT1002_00008 PF03352 Methyladenine glycosylase MIT1002_00010 PF04220 Der GTPase activator (YihI) MIT1002_00012 PF00034 Cytochrome c MIT1002_00013 PF01926 50S ribosome-binding GTPase MIT1002_00014 PF01367 5'-3' exonuclease, C-terminal SAM fold MIT1002_00014 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MIT1002_00014 PF00476 DNA polymerase family A MIT1002_00014 PF01612 3'-5' exonuclease MIT1002_00016 PF02386 Cation transport protein MIT1002_00017 PF02080 TrkA-C domain MIT1002_00017 PF02254 TrkA-N domain MIT1002_00018 PF01029 NusB family MIT1002_00018 PF01189 16S rRNA methyltransferase RsmB/F MIT1002_00019 PF02911 Formyl transferase, C-terminal domain MIT1002_00019 PF00551 Formyl transferase MIT1002_00020 PF01327 Polypeptide deformylase MIT1002_00022 PF02481 DNA recombination-mediator protein A MIT1002_00022 PF17782 DprA winged helix domain MIT1002_00023 PF04361 Protein of unknown function (DUF494) MIT1002_00025 PF01300 Telomere recombination MIT1002_00026 PF01218 Coproporphyrinogen III oxidase MIT1002_00027 PF03922 OmpW family MIT1002_00029 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MIT1002_00029 PF01488 Shikimate / quinate 5-dehydrogenase MIT1002_00029 PF08501 Shikimate dehydrogenase substrate binding domain MIT1002_00030 PF00132 Bacterial transferase hexapeptide (six repeats) MIT1002_00040 PF01336 OB-fold nucleic acid binding domain MIT1002_00040 PF02811 PHP domain MIT1002_00040 PF07733 Bacterial DNA polymerase III alpha NTPase domain MIT1002_00040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MIT1002_00040 PF14579 Helix-hairpin-helix motif MIT1002_00046 PF02225 PA domain MIT1002_00046 PF04389 Peptidase family M28 MIT1002_00047 PF00440 Bacterial regulatory proteins, tetR family MIT1002_00048 PF04127 DNA / pantothenate metabolism flavoprotein MIT1002_00048 PF02441 Flavoprotein MIT1002_00049 PF04002 RadC-like JAB domain MIT1002_00053 PF06082 Exopolysaccharide biosynthesis protein YbjH MIT1002_00054 PF00830 Ribosomal L28 family MIT1002_00055 PF00471 Ribosomal protein L33 MIT1002_00057 PF06827 Zinc finger found in FPG and IleRS MIT1002_00057 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MIT1002_00057 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MIT1002_00058 PF01467 Cytidylyltransferase-like MIT1002_00062 PF00563 EAL domain MIT1002_00062 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00062 PF03707 Bacterial signalling protein N terminal repeat MIT1002_00063 PF00155 Aminotransferase class I and II MIT1002_00064 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_00064 PF00107 Zinc-binding dehydrogenase MIT1002_00065 PF00581 Rhodanese-like domain MIT1002_00066 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MIT1002_00066 PF01694 Rhomboid family MIT1002_00068 PF04345 Chorismate lyase MIT1002_00069 PF01040 UbiA prenyltransferase family MIT1002_00070 PF04380 Membrane fusogenic activity MIT1002_00071 PF13361 UvrD-like helicase C-terminal domain MIT1002_00071 PF00580 UvrD/REP helicase N-terminal domain MIT1002_00072 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00072 PF00563 EAL domain MIT1002_00072 PF03707 Bacterial signalling protein N terminal repeat MIT1002_00073 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MIT1002_00077 PF03553 Na+/H+ antiporter family MIT1002_00078 PF02028 BCCT, betaine/carnitine/choline family transporter MIT1002_00082 PF13391 HNH endonuclease MIT1002_00084 PF07715 TonB-dependent Receptor Plug Domain MIT1002_00084 PF00593 TonB dependent receptor MIT1002_00086 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_00086 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_00086 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIT1002_00087 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_00087 PF03466 LysR substrate binding domain MIT1002_00088 PF00753 Metallo-beta-lactamase superfamily MIT1002_00089 PF04317 YcjX-like family, DUF463 MIT1002_00092 PF04055 Radical SAM superfamily MIT1002_00092 PF06968 Biotin and Thiamin Synthesis associated domain MIT1002_00093 PF05690 Thiazole biosynthesis protein ThiG MIT1002_00095 PF00899 ThiF family MIT1002_00096 PF02581 Thiamine monophosphate synthase MIT1002_00097 PF13667 ThiC-associated domain MIT1002_00097 PF01964 Radical SAM ThiC family MIT1002_00099 PF07219 HemY protein N-terminus MIT1002_00099 PF07719 Tetratricopeptide repeat MIT1002_00100 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MIT1002_00101 PF02602 Uroporphyrinogen-III synthase HemD MIT1002_00102 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MIT1002_00102 PF03900 Porphobilinogen deaminase, C-terminal domain MIT1002_00103 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00103 PF00072 Response regulator receiver domain MIT1002_00106 PF00625 Guanylate kinase MIT1002_00107 PF01192 RNA polymerase Rpb6 MIT1002_00108 PF13291 ACT domain MIT1002_00108 PF04607 Region found in RelA / SpoT proteins MIT1002_00108 PF02824 TGS domain MIT1002_00109 PF01042 Endoribonuclease L-PSP MIT1002_00110 PF12105 SpoU, rRNA methylase, C-terminal MIT1002_00110 PF00588 SpoU rRNA Methylase family MIT1002_00111 PF17191 RecG wedge domain MIT1002_00111 PF00271 Helicase conserved C-terminal domain MIT1002_00111 PF00270 DEAD/DEAH box helicase MIT1002_00112 PF04445 Putative SAM-dependent methyltransferase MIT1002_00113 PF08534 Redoxin MIT1002_00116 PF00528 Binding-protein-dependent transport system inner membrane component MIT1002_00117 PF08402 TOBE domain MIT1002_00117 PF00005 ABC transporter MIT1002_00124 PF03922 OmpW family MIT1002_00127 PF04940 Sensors of blue-light using FAD MIT1002_00127 PF00563 EAL domain MIT1002_00128 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00129 PF03466 LysR substrate binding domain MIT1002_00129 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_00130 PF01810 LysE type translocator MIT1002_00131 PF00893 Small Multidrug Resistance protein MIT1002_00134 PF00529 HlyD membrane-fusion protein of T1SS MIT1002_00134 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIT1002_00135 PF00873 AcrB/AcrD/AcrF family MIT1002_00137 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain MIT1002_00137 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain MIT1002_00138 PF00850 Histone deacetylase domain MIT1002_00139 PF00462 Glutaredoxin MIT1002_00141 PF12729 Four helix bundle sensory module for signal transduction MIT1002_00141 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_00141 PF00672 HAMP domain MIT1002_00143 PF11737 Protein of unknown function (DUF3300) MIT1002_00144 PF00925 GTP cyclohydrolase II MIT1002_00145 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00145 PF00563 EAL domain MIT1002_00145 PF08448 PAS fold MIT1002_00148 PF00270 DEAD/DEAH box helicase MIT1002_00148 PF09382 RQC domain MIT1002_00148 PF16124 RecQ zinc-binding MIT1002_00148 PF00570 HRDC domain MIT1002_00148 PF00271 Helicase conserved C-terminal domain MIT1002_00149 PF03061 Thioesterase superfamily MIT1002_00150 PF00571 CBS domain MIT1002_00150 PF03448 MgtE intracellular N domain MIT1002_00150 PF01769 Divalent cation transporter MIT1002_00151 PF00892 EamA-like transporter family MIT1002_00152 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00152 PF08448 PAS fold MIT1002_00153 PF13361 UvrD-like helicase C-terminal domain MIT1002_00153 PF00580 UvrD/REP helicase N-terminal domain MIT1002_00154 PF00132 Bacterial transferase hexapeptide (six repeats) MIT1002_00154 PF06426 Serine acetyltransferase, N-terminal MIT1002_00155 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00156 PF13419 Haloacid dehalogenase-like hydrolase MIT1002_00157 PF02899 Phage integrase, N-terminal SAM-like domain MIT1002_00157 PF00589 Phage integrase family MIT1002_00159 PF01678 Diaminopimelate epimerase MIT1002_00160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MIT1002_00160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MIT1002_00163 PF01569 PAP2 superfamily MIT1002_00164 PF03737 Aldolase/RraA MIT1002_00167 PF02441 Flavoprotein MIT1002_00168 PF08245 Mur ligase middle domain MIT1002_00168 PF02875 Mur ligase family, glutamate ligase domain MIT1002_00168 PF01225 Mur ligase family, catalytic domain MIT1002_00169 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MIT1002_00170 PF00719 Inorganic pyrophosphatase MIT1002_00179 PF17760 UvrA interaction domain MIT1002_00179 PF17755 UvrA DNA-binding domain MIT1002_00179 PF00005 ABC transporter MIT1002_00180 PF07690 Major Facilitator Superfamily MIT1002_00181 PF13419 Haloacid dehalogenase-like hydrolase MIT1002_00185 PF01609 Transposase DDE domain MIT1002_00185 PF13006 Insertion element 4 transposase N-terminal MIT1002_00186 PF00356 Bacterial regulatory proteins, lacI family MIT1002_00187 PF01263 Aldose 1-epimerase MIT1002_00188 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MIT1002_00188 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MIT1002_00189 PF10509 Galactokinase galactose-binding signature MIT1002_00189 PF08544 GHMP kinases C terminal MIT1002_00189 PF00288 GHMP kinases N terminal domain MIT1002_00190 PF00474 Sodium:solute symporter family MIT1002_00191 PF00436 Single-strand binding protein family MIT1002_00194 PF16875 Glycosyl hydrolase family 36 N-terminal domain MIT1002_00194 PF16874 Glycosyl hydrolase family 36 C-terminal domain MIT1002_00195 PF00474 Sodium:solute symporter family MIT1002_00197 PF13006 Insertion element 4 transposase N-terminal MIT1002_00197 PF01609 Transposase DDE domain MIT1002_00198 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MIT1002_00198 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MIT1002_00199 PF00455 DeoR C terminal sensor domain MIT1002_00199 PF08220 DeoR-like helix-turn-helix domain MIT1002_00200 PF01266 FAD dependent oxidoreductase MIT1002_00200 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MIT1002_00207 PF00263 Bacterial type II and III secretion system protein MIT1002_00207 PF03958 Bacterial type II/III secretion system short domain MIT1002_00208 PF13401 AAA domain MIT1002_00208 PF01471 Putative peptidoglycan binding domain MIT1002_00210 PF00437 Type II/IV secretion system protein MIT1002_00210 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MIT1002_00211 PF00482 Type II secretion system (T2SS), protein F MIT1002_00213 PF07963 Prokaryotic N-terminal methylation motif MIT1002_00214 PF00114 Pilin (bacterial filament) MIT1002_00214 PF07963 Prokaryotic N-terminal methylation motif MIT1002_00221 PF04085 rod shape-determining protein MreC MIT1002_00222 PF04093 rod shape-determining protein MreD MIT1002_00223 PF02545 Maf-like protein MIT1002_00224 PF10150 Ribonuclease E/G family MIT1002_00224 PF00575 S1 RNA binding domain MIT1002_00226 PF00795 Carbon-nitrogen hydrolase MIT1002_00227 PF01523 Putative modulator of DNA gyrase MIT1002_00229 PF04751 Protein of unknown function (DUF615) MIT1002_00230 PF01523 Putative modulator of DNA gyrase MIT1002_00232 PF02929 Beta galactosidase small chain MIT1002_00232 PF16353 Domain of unknown function(DUF4981) MIT1002_00232 PF00703 Glycosyl hydrolases family 2 MIT1002_00232 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MIT1002_00232 PF02837 Glycosyl hydrolases family 2, sugar binding domain MIT1002_00233 PF00486 Transcriptional regulatory protein, C terminal MIT1002_00233 PF00072 Response regulator receiver domain MIT1002_00234 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIT1002_00234 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00234 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00235 PF08323 Starch synthase catalytic domain MIT1002_00235 PF00534 Glycosyl transferases group 1 MIT1002_00236 PF05175 Methyltransferase small domain MIT1002_00236 PF08468 Methyltransferase small domain N-terminal MIT1002_00237 PF02390 Putative methyltransferase MIT1002_00239 PF00633 Helix-hairpin-helix motif MIT1002_00239 PF00730 HhH-GPD superfamily base excision DNA repair protein MIT1002_00239 PF14815 NUDIX domain MIT1002_00240 PF04362 Bacterial Fe(2+) trafficking MIT1002_00244 PF00551 Formyl transferase MIT1002_00244 PF02911 Formyl transferase, C-terminal domain MIT1002_00246 PF00672 HAMP domain MIT1002_00246 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00246 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00247 PF00072 Response regulator receiver domain MIT1002_00247 PF00486 Transcriptional regulatory protein, C terminal MIT1002_00251 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIT1002_00252 PF00873 AcrB/AcrD/AcrF family MIT1002_00261 PF08031 Berberine and berberine like MIT1002_00261 PF01565 FAD binding domain MIT1002_00268 PF00042 Globin MIT1002_00268 PF00970 Oxidoreductase FAD-binding domain MIT1002_00268 PF00175 Oxidoreductase NAD-binding domain MIT1002_00272 PF01750 Hydrogenase maturation protease MIT1002_00274 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MIT1002_00274 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MIT1002_00275 PF00374 Nickel-dependent hydrogenase MIT1002_00277 PF01455 HupF/HypC family MIT1002_00278 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MIT1002_00279 PF02492 CobW/HypB/UreG, nucleotide-binding domain MIT1002_00280 PF01924 Hydrogenase formation hypA family MIT1002_00281 PF17788 HypF Kae1-like domain MIT1002_00281 PF07503 HypF finger MIT1002_00281 PF01300 Telomere recombination MIT1002_00281 PF00708 Acylphosphatase MIT1002_00282 PF00586 AIR synthase related protein, N-terminal domain MIT1002_00282 PF02769 AIR synthase related protein, C-terminal domain MIT1002_00283 PF00376 MerR family regulatory protein MIT1002_00283 PF09278 MerR, DNA binding MIT1002_00284 PF00403 Heavy-metal-associated domain MIT1002_00297 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIT1002_00297 PF00529 HlyD membrane-fusion protein of T1SS MIT1002_00298 PF00873 AcrB/AcrD/AcrF family MIT1002_00299 PF01545 Cation efflux family MIT1002_00299 PF16916 Dimerisation domain of Zinc Transporter MIT1002_00301 PF01219 Prokaryotic diacylglycerol kinase MIT1002_00302 PF08019 Phosphoethanolamine transferase EptA/EptB MIT1002_00302 PF00884 Sulfatase MIT1002_00303 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MIT1002_00305 PF00535 Glycosyl transferase family 2 MIT1002_00307 PF00072 Response regulator receiver domain MIT1002_00307 PF00486 Transcriptional regulatory protein, C terminal MIT1002_00308 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00308 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00308 PF00672 HAMP domain MIT1002_00312 PF00873 AcrB/AcrD/AcrF family MIT1002_00315 PF01435 Peptidase family M48 MIT1002_00318 PF13005 zinc-finger binding domain of transposase IS66 MIT1002_00318 PF03050 Transposase IS66 family MIT1002_00318 PF13007 Transposase C of IS166 homeodomain MIT1002_00318 PF13817 IS66 C-terminal element MIT1002_00322 PF01695 IstB-like ATP binding protein MIT1002_00323 PF00665 Integrase core domain MIT1002_00327 PF02911 Formyl transferase, C-terminal domain MIT1002_00327 PF00551 Formyl transferase MIT1002_00329 PF00376 MerR family regulatory protein MIT1002_00329 PF09278 MerR, DNA binding MIT1002_00330 PF00403 Heavy-metal-associated domain MIT1002_00337 PF13520 Amino acid permease MIT1002_00339 PF07731 Multicopper oxidase MIT1002_00339 PF00394 Multicopper oxidase MIT1002_00339 PF07732 Multicopper oxidase MIT1002_00347 PF13419 Haloacid dehalogenase-like hydrolase MIT1002_00348 PF01609 Transposase DDE domain MIT1002_00348 PF13006 Insertion element 4 transposase N-terminal MIT1002_00351 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MIT1002_00351 PF00356 Bacterial regulatory proteins, lacI family MIT1002_00353 PF01204 Trehalase MIT1002_00356 PF13419 Haloacid dehalogenase-like hydrolase MIT1002_00360 PF02384 N-6 DNA Methylase MIT1002_00363 PF00356 Bacterial regulatory proteins, lacI family MIT1002_00364 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MIT1002_00364 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MIT1002_00366 PF03825 Nucleoside H+ symporter MIT1002_00368 PF00732 GMC oxidoreductase MIT1002_00368 PF05199 GMC oxidoreductase MIT1002_00371 PF00465 Iron-containing alcohol dehydrogenase MIT1002_00377 PF01063 Amino-transferase class IV MIT1002_00378 PF00300 Histidine phosphatase superfamily (branch 1) MIT1002_00380 PF00694 Aconitase C-terminal domain MIT1002_00380 PF00330 Aconitase family (aconitate hydratase) MIT1002_00382 PF00437 Type II/IV secretion system protein MIT1002_00382 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MIT1002_00383 PF00338 Ribosomal protein S10p/S20e MIT1002_00384 PF00297 Ribosomal protein L3 MIT1002_00385 PF00573 Ribosomal protein L4/L1 family MIT1002_00386 PF00276 Ribosomal protein L23 MIT1002_00387 PF03947 Ribosomal Proteins L2, C-terminal domain MIT1002_00387 PF00181 Ribosomal Proteins L2, RNA binding domain MIT1002_00388 PF00203 Ribosomal protein S19 MIT1002_00389 PF00237 Ribosomal protein L22p/L17e MIT1002_00390 PF07650 KH domain MIT1002_00390 PF00189 Ribosomal protein S3, C-terminal domain MIT1002_00391 PF00252 Ribosomal protein L16p/L10e MIT1002_00392 PF00831 Ribosomal L29 protein MIT1002_00393 PF00366 Ribosomal protein S17 MIT1002_00395 PF00534 Glycosyl transferases group 1 MIT1002_00395 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MIT1002_00400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_00400 PF00672 HAMP domain MIT1002_00400 PF02743 Cache domain MIT1002_00401 PF01432 Peptidase family M3 MIT1002_00404 PF00551 Formyl transferase MIT1002_00404 PF01842 ACT domain MIT1002_00406 PF00270 DEAD/DEAH box helicase MIT1002_00406 PF04408 Helicase associated domain (HA2) MIT1002_00406 PF00271 Helicase conserved C-terminal domain MIT1002_00406 PF08482 ATP-dependent helicase C-terminal MIT1002_00408 PF13406 Transglycosylase SLT domain MIT1002_00409 PF00912 Transglycosylase MIT1002_00409 PF00905 Penicillin binding protein transpeptidase domain MIT1002_00409 PF14814 Bifunctional transglycosylase second domain MIT1002_00412 PF05661 Protein of unknown function (DUF808) MIT1002_00414 PF12833 Helix-turn-helix domain MIT1002_00416 PF00543 Nitrogen regulatory protein P-II MIT1002_00417 PF00909 Ammonium Transporter Family MIT1002_00418 PF13006 Insertion element 4 transposase N-terminal MIT1002_00418 PF01609 Transposase DDE domain MIT1002_00420 PF04261 Dyp-type peroxidase family MIT1002_00421 PF00211 Adenylate and Guanylate cyclase catalytic domain MIT1002_00421 PF00672 HAMP domain MIT1002_00422 PF00202 Aminotransferase class-III MIT1002_00423 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MIT1002_00423 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MIT1002_00426 PF00873 AcrB/AcrD/AcrF family MIT1002_00428 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MIT1002_00428 PF00072 Response regulator receiver domain MIT1002_00428 PF01627 Hpt domain MIT1002_00428 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00428 PF00672 HAMP domain MIT1002_00430 PF00672 HAMP domain MIT1002_00430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00430 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00430 PF01627 Hpt domain MIT1002_00430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MIT1002_00430 PF00072 Response regulator receiver domain MIT1002_00431 PF00521 DNA gyrase/topoisomerase IV, subunit A MIT1002_00431 PF03989 DNA gyrase C-terminal domain, beta-propeller MIT1002_00433 PF00563 EAL domain MIT1002_00433 PF13188 PAS domain MIT1002_00433 PF03707 Bacterial signalling protein N terminal repeat MIT1002_00433 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00435 PF00171 Aldehyde dehydrogenase family MIT1002_00436 PF04958 Arginine N-succinyltransferase beta subunit MIT1002_00437 PF00202 Aminotransferase class-III MIT1002_00439 PF00117 Glutamine amidotransferase class-I MIT1002_00440 PF00579 tRNA synthetases class I (W and Y) MIT1002_00441 PF00834 Ribulose-phosphate 3 epimerase family MIT1002_00445 PF02086 D12 class N6 adenine-specific DNA methyltransferase MIT1002_00447 PF01761 3-dehydroquinate synthase MIT1002_00448 PF01202 Shikimate kinase MIT1002_00449 PF00263 Bacterial type II and III secretion system protein MIT1002_00449 PF07660 Secretin and TonB N terminus short domain MIT1002_00449 PF03958 Bacterial type II/III secretion system short domain MIT1002_00449 PF11741 AMIN domain MIT1002_00451 PF04350 Pilus assembly protein, PilO MIT1002_00452 PF05137 Fimbrial assembly protein (PilN) MIT1002_00453 PF11104 Type IV pilus assembly protein PilM; MIT1002_00454 PF00905 Penicillin binding protein transpeptidase domain MIT1002_00454 PF00912 Transglycosylase MIT1002_00454 PF17092 Penicillin-binding protein OB-like domain MIT1002_00455 PF00390 Malic enzyme, N-terminal domain MIT1002_00455 PF03949 Malic enzyme, NAD binding domain MIT1002_00457 PF02798 Glutathione S-transferase, N-terminal domain MIT1002_00461 PF00199 Catalase MIT1002_00461 PF06628 Catalase-related immune-responsive MIT1002_00466 PF00696 Amino acid kinase family MIT1002_00466 PF00583 Acetyltransferase (GNAT) family MIT1002_00467 PF14698 Argininosuccinate lyase C-terminal MIT1002_00467 PF00206 Lyase MIT1002_00468 PF00764 Arginosuccinate synthase MIT1002_00469 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MIT1002_00469 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MIT1002_00470 PF00696 Amino acid kinase family MIT1002_00471 PF01118 Semialdehyde dehydrogenase, NAD binding domain MIT1002_00471 PF02774 Semialdehyde dehydrogenase, dimerisation domain MIT1002_00472 PF02142 MGS-like domain MIT1002_00474 PF02107 Flagellar L-ring protein MIT1002_00477 PF00486 Transcriptional regulatory protein, C terminal MIT1002_00477 PF00072 Response regulator receiver domain MIT1002_00478 PF00672 HAMP domain MIT1002_00478 PF16527 Two-component sensor protein CpxA, periplasmic domain MIT1002_00478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00478 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00479 PF12146 Serine aminopeptidase, S33 MIT1002_00480 PF00588 SpoU rRNA Methylase family MIT1002_00481 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIT1002_00482 PF12704 MacB-like periplasmic core domain MIT1002_00482 PF02687 FtsX-like permease family MIT1002_00482 PF00005 ABC transporter MIT1002_00483 PF02321 Outer membrane efflux protein MIT1002_00485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MIT1002_00485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MIT1002_00486 PF02556 Preprotein translocase subunit SecB MIT1002_00487 PF00462 Glutaredoxin MIT1002_00488 PF00581 Rhodanese-like domain MIT1002_00489 PF01551 Peptidase family M23 MIT1002_00490 PF04748 Divergent polysaccharide deacetylase MIT1002_00492 PF03009 Glycerophosphoryl diester phosphodiesterase family MIT1002_00494 PF02666 Phosphatidylserine decarboxylase MIT1002_00495 PF03193 RsgA GTPase MIT1002_00496 PF00929 Exonuclease MIT1002_00499 PF07715 TonB-dependent Receptor Plug Domain MIT1002_00499 PF00593 TonB dependent receptor MIT1002_00500 PF13181 Tetratricopeptide repeat MIT1002_00503 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MIT1002_00503 PF00205 Thiamine pyrophosphate enzyme, central domain MIT1002_00503 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MIT1002_00504 PF10369 Small subunit of acetolactate synthase MIT1002_00506 PF02416 mttA/Hcf106 family MIT1002_00507 PF02416 mttA/Hcf106 family MIT1002_00508 PF00902 Sec-independent protein translocase protein (TatC) MIT1002_00510 PF01026 TatD related DNase MIT1002_00511 PF00563 EAL domain MIT1002_00511 PF01590 GAF domain MIT1002_00511 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00511 PF00360 Phytochrome region MIT1002_00512 PF00490 Delta-aminolevulinic acid dehydratase MIT1002_00513 PF01609 Transposase DDE domain MIT1002_00513 PF13006 Insertion element 4 transposase N-terminal MIT1002_00514 PF02541 Ppx/GppA phosphatase family MIT1002_00515 PF00270 DEAD/DEAH box helicase MIT1002_00515 PF00271 Helicase conserved C-terminal domain MIT1002_00516 PF00085 Thioredoxin MIT1002_00517 PF07497 Rho termination factor, RNA-binding domain MIT1002_00517 PF07498 Rho termination factor, N-terminal domain MIT1002_00517 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIT1002_00518 PF01546 Peptidase family M20/M25/M40 MIT1002_00518 PF07687 Peptidase dimerisation domain MIT1002_00519 PF00072 Response regulator receiver domain MIT1002_00519 PF09308 LuxQ, periplasmic MIT1002_00519 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00519 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00520 PF06965 Na+/H+ antiporter 1 MIT1002_00521 PF00731 AIR carboxylase MIT1002_00522 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MIT1002_00522 PF02222 ATP-grasp domain MIT1002_00525 PF00210 Ferritin-like domain MIT1002_00526 PF07995 Glucose / Sorbosone dehydrogenase MIT1002_00527 PF00326 Prolyl oligopeptidase family MIT1002_00527 PF07676 WD40-like Beta Propeller Repeat MIT1002_00529 PF00085 Thioredoxin MIT1002_00532 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MIT1002_00533 PF00709 Adenylosuccinate synthetase MIT1002_00534 PF00171 Aldehyde dehydrogenase family MIT1002_00539 PF03553 Na+/H+ antiporter family MIT1002_00540 PF00933 Glycosyl hydrolase family 3 N terminal domain MIT1002_00542 PF07075 Protein of unknown function (DUF1343) MIT1002_00543 PF01380 SIS domain MIT1002_00544 PF00842 Alanine racemase, C-terminal domain MIT1002_00544 PF01168 Alanine racemase, N-terminal domain MIT1002_00547 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIT1002_00553 PF00464 Serine hydroxymethyltransferase MIT1002_00554 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_00554 PF03466 LysR substrate binding domain MIT1002_00555 PF03831 PhnA domain MIT1002_00555 PF08274 PhnA Zinc-Ribbon MIT1002_00556 PF00583 Acetyltransferase (GNAT) family MIT1002_00558 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MIT1002_00562 PF09234 Domain of unknown function (DUF1963) MIT1002_00568 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MIT1002_00571 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MIT1002_00573 PF00589 Phage integrase family MIT1002_00573 PF13495 Phage integrase, N-terminal SAM-like domain MIT1002_00574 PF02803 Thiolase, C-terminal domain MIT1002_00574 PF00108 Thiolase, N-terminal domain MIT1002_00575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MIT1002_00575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MIT1002_00575 PF00378 Enoyl-CoA hydratase/isomerase MIT1002_00576 PF10145 Phage-related minor tail protein MIT1002_00576 PF01464 Transglycosylase SLT domain MIT1002_00576 PF01551 Peptidase family M23 MIT1002_00577 PF00557 Metallopeptidase family M24 MIT1002_00579 PF00348 Polyprenyl synthetase MIT1002_00580 PF00829 Ribosomal prokaryotic L21 protein MIT1002_00581 PF01016 Ribosomal L27 protein MIT1002_00582 PF01926 50S ribosome-binding GTPase MIT1002_00582 PF01018 GTP1/OBG MIT1002_00585 PF04851 Type III restriction enzyme, res subunit MIT1002_00590 PF02384 N-6 DNA Methylase MIT1002_00590 PF12161 HsdM N-terminal domain MIT1002_00591 PF01420 Type I restriction modification DNA specificity domain MIT1002_00593 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MIT1002_00593 PF12008 Type I restriction and modification enzyme - subunit R C terminal MIT1002_00593 PF18766 SWI2/SNF2 ATPase MIT1002_00605 PF00873 AcrB/AcrD/AcrF family MIT1002_00621 PF09055 Nickel-containing superoxide dismutase MIT1002_00624 PF00186 Dihydrofolate reductase MIT1002_00625 PF00140 Sigma-70 factor, region 1.2 MIT1002_00625 PF04542 Sigma-70 region 2 MIT1002_00625 PF04539 Sigma-70 region 3 MIT1002_00625 PF04545 Sigma-70, region 4 MIT1002_00626 PF01476 LysM domain MIT1002_00626 PF01551 Peptidase family M23 MIT1002_00627 PF09335 SNARE associated Golgi protein MIT1002_00629 PF01142 tRNA pseudouridine synthase D (TruD) MIT1002_00630 PF02542 YgbB family MIT1002_00631 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MIT1002_00632 PF04977 Septum formation initiator MIT1002_00634 PF17200 Single Cache domain 2 MIT1002_00634 PF00672 HAMP domain MIT1002_00634 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_00635 PF01037 Lrp/AsnC ligand binding domain MIT1002_00635 PF13404 AsnC-type helix-turn-helix domain MIT1002_00636 PF00107 Zinc-binding dehydrogenase MIT1002_00636 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_00637 PF00171 Aldehyde dehydrogenase family MIT1002_00637 PF01619 Proline dehydrogenase MIT1002_00637 PF14850 DNA-binding domain of Proline dehydrogenase MIT1002_00637 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MIT1002_00638 PF02321 Outer membrane efflux protein MIT1002_00640 PF00873 AcrB/AcrD/AcrF family MIT1002_00641 PF00486 Transcriptional regulatory protein, C terminal MIT1002_00641 PF00072 Response regulator receiver domain MIT1002_00642 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00642 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00646 PF02976 DNA mismatch repair enzyme MutH MIT1002_00647 PF00293 NUDIX domain MIT1002_00648 PF02896 PEP-utilising enzyme, TIM barrel domain MIT1002_00648 PF01590 GAF domain MIT1002_00648 PF05524 PEP-utilising enzyme, N-terminal MIT1002_00648 PF00391 PEP-utilising enzyme, mobile domain MIT1002_00649 PF01925 Sulfite exporter TauE/SafE MIT1002_00650 PF01790 Prolipoprotein diacylglyceryl transferase MIT1002_00651 PF00303 Thymidylate synthase MIT1002_00652 PF00072 Response regulator receiver domain MIT1002_00653 PF05230 MASE2 domain MIT1002_00653 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00654 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MIT1002_00654 PF00072 Response regulator receiver domain MIT1002_00654 PF01627 Hpt domain MIT1002_00654 PF00672 HAMP domain MIT1002_00654 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00655 PF07690 Major Facilitator Superfamily MIT1002_00658 PF00849 RNA pseudouridylate synthase MIT1002_00659 PF00271 Helicase conserved C-terminal domain MIT1002_00659 PF12137 RNA polymerase recycling family C-terminal MIT1002_00659 PF18339 RapA N-terminal Tudor like domain 1 MIT1002_00659 PF00176 SNF2 family N-terminal domain MIT1002_00659 PF18337 RapA N-terminal Tudor like domain MIT1002_00661 PF13638 PIN domain MIT1002_00661 PF02562 PhoH-like protein MIT1002_00662 PF00392 Bacterial regulatory proteins, gntR family MIT1002_00662 PF00155 Aminotransferase class I and II MIT1002_00663 PF13746 4Fe-4S dicluster domain MIT1002_00663 PF12801 4Fe-4S binding domain MIT1002_00663 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MIT1002_00665 PF10414 Sirohaem synthase dimerisation region MIT1002_00665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MIT1002_00666 PF00270 DEAD/DEAH box helicase MIT1002_00666 PF00271 Helicase conserved C-terminal domain MIT1002_00666 PF03880 DbpA RNA binding domain MIT1002_00670 PF02321 Outer membrane efflux protein MIT1002_00671 PF00293 NUDIX domain MIT1002_00673 PF00149 Calcineurin-like phosphoesterase MIT1002_00674 PF05728 Uncharacterised protein family (UPF0227) MIT1002_00675 PF00204 DNA gyrase B MIT1002_00675 PF01751 Toprim domain MIT1002_00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00675 PF00986 DNA gyrase B subunit, carboxyl terminus MIT1002_00677 PF13419 Haloacid dehalogenase-like hydrolase MIT1002_00681 PF04055 Radical SAM superfamily MIT1002_00682 PF01132 Elongation factor P (EF-P) OB domain MIT1002_00682 PF08207 Elongation factor P (EF-P) KOW-like domain MIT1002_00682 PF09285 Elongation factor P, C-terminal MIT1002_00683 PF00152 tRNA synthetases class II (D, K and N) MIT1002_00685 PF07715 TonB-dependent Receptor Plug Domain MIT1002_00685 PF00593 TonB dependent receptor MIT1002_00688 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MIT1002_00689 PF05175 Methyltransferase small domain MIT1002_00691 PF01722 BolA-like protein MIT1002_00692 PF01569 PAP2 superfamily MIT1002_00694 PF08376 Nitrate and nitrite sensing MIT1002_00694 PF03861 ANTAR domain MIT1002_00696 PF01548 Transposase MIT1002_00696 PF02371 Transposase IS116/IS110/IS902 family MIT1002_00697 PF01740 STAS domain MIT1002_00697 PF00916 Sulfate permease family MIT1002_00698 PF04324 BFD-like [2Fe-2S] binding domain MIT1002_00698 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MIT1002_00698 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_00698 PF18267 Rubredoxin NAD+ reductase C-terminal domain MIT1002_00698 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MIT1002_00699 PF13806 Rieske-like [2Fe-2S] domain MIT1002_00700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MIT1002_00700 PF00384 Molybdopterin oxidoreductase MIT1002_00700 PF01568 Molydopterin dinucleotide binding domain MIT1002_00700 PF04324 BFD-like [2Fe-2S] binding domain MIT1002_00701 PF10414 Sirohaem synthase dimerisation region MIT1002_00701 PF14824 Sirohaem biosynthesis protein central MIT1002_00701 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MIT1002_00702 PF02885 Glycosyl transferase family, helical bundle domain MIT1002_00702 PF00591 Glycosyl transferase family, a/b domain MIT1002_00705 PF02872 5'-nucleotidase, C-terminal domain MIT1002_00705 PF00149 Calcineurin-like phosphoesterase MIT1002_00706 PF01590 GAF domain MIT1002_00706 PF00563 EAL domain MIT1002_00706 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00706 PF00360 Phytochrome region MIT1002_00707 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_00707 PF08447 PAS fold MIT1002_00707 PF13426 PAS domain MIT1002_00709 PF00005 ABC transporter MIT1002_00710 PF00528 Binding-protein-dependent transport system inner membrane component MIT1002_00711 PF00005 ABC transporter MIT1002_00714 PF01323 DSBA-like thioredoxin domain MIT1002_00716 PF00593 TonB dependent receptor MIT1002_00716 PF07715 TonB-dependent Receptor Plug Domain MIT1002_00718 PF01636 Phosphotransferase enzyme family MIT1002_00719 PF13746 4Fe-4S dicluster domain MIT1002_00719 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MIT1002_00719 PF12801 4Fe-4S binding domain MIT1002_00722 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIT1002_00722 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_00722 PF12806 Acetyl-CoA dehydrogenase C-terminal like MIT1002_00722 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_00725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MIT1002_00725 PF13378 Enolase C-terminal domain-like MIT1002_00726 PF00596 Class II Aldolase and Adducin N-terminal domain MIT1002_00728 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIT1002_00729 PF00873 AcrB/AcrD/AcrF family MIT1002_00732 PF00672 HAMP domain MIT1002_00732 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_00732 PF02743 Cache domain MIT1002_00733 PF00140 Sigma-70 factor, region 1.2 MIT1002_00733 PF04542 Sigma-70 region 2 MIT1002_00733 PF03979 Sigma-70 factor, region 1.1 MIT1002_00733 PF04539 Sigma-70 region 3 MIT1002_00733 PF04545 Sigma-70, region 4 MIT1002_00733 PF04546 Sigma-70, non-essential region MIT1002_00734 PF10410 DnaB-helicase binding domain of primase MIT1002_00734 PF08278 DNA primase DnaG DnaB-binding MIT1002_00734 PF08275 DNA primase catalytic core, N-terminal domain MIT1002_00734 PF01807 CHC2 zinc finger MIT1002_00737 PF01165 Ribosomal protein S21 MIT1002_00738 PF00814 Glycoprotease family MIT1002_00740 PF02660 Glycerol-3-phosphate acyltransferase MIT1002_00741 PF02152 Dihydroneopterin aldolase MIT1002_00743 PF02673 Bacitracin resistance protein BacA MIT1002_00744 PF01230 HIT domain MIT1002_00747 PF03594 Benzoate membrane transport protein MIT1002_00748 PF07883 Cupin domain MIT1002_00748 PF01381 Helix-turn-helix MIT1002_00749 PF04381 Putative exonuclease, RdgC MIT1002_00750 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00750 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIT1002_00750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00751 PF00072 Response regulator receiver domain MIT1002_00751 PF00486 Transcriptional regulatory protein, C terminal MIT1002_00752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00752 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00752 PF00989 PAS fold MIT1002_00752 PF11808 Phosphate regulon sensor protein PhoR MIT1002_00753 PF12849 PBP superfamily domain MIT1002_00758 PF01618 MotA/TolQ/ExbB proton channel family MIT1002_00759 PF01618 MotA/TolQ/ExbB proton channel family MIT1002_00760 PF02472 Biopolymer transport protein ExbD/TolR MIT1002_00761 PF03544 Gram-negative bacterial TonB protein C-terminal MIT1002_00763 PF00072 Response regulator receiver domain MIT1002_00764 PF00672 HAMP domain MIT1002_00764 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00764 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00764 PF01627 Hpt domain MIT1002_00764 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MIT1002_00764 PF00072 Response regulator receiver domain MIT1002_00765 PF00501 AMP-binding enzyme MIT1002_00765 PF13193 AMP-binding enzyme C-terminal domain MIT1002_00767 PF07995 Glucose / Sorbosone dehydrogenase MIT1002_00768 PF06434 Aconitate hydratase 2 N-terminus MIT1002_00768 PF11791 Aconitate B N-terminal domain MIT1002_00768 PF00330 Aconitase family (aconitate hydratase) MIT1002_00770 PF00072 Response regulator receiver domain MIT1002_00770 PF17149 Periplasmic sensor domain found in signal transduction proteins MIT1002_00770 PF00672 HAMP domain MIT1002_00770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00770 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00770 PF01627 Hpt domain MIT1002_00774 PF00330 Aconitase family (aconitate hydratase) MIT1002_00774 PF06434 Aconitate hydratase 2 N-terminus MIT1002_00774 PF11791 Aconitate B N-terminal domain MIT1002_00776 PF00696 Amino acid kinase family MIT1002_00776 PF01842 ACT domain MIT1002_00778 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_00778 PF00672 HAMP domain MIT1002_00779 PF00149 Calcineurin-like phosphoesterase MIT1002_00780 PF04379 ApaG domain MIT1002_00781 PF00398 Ribosomal RNA adenine dimethylase MIT1002_00782 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MIT1002_00783 PF09312 SurA N-terminal domain MIT1002_00783 PF00639 PPIC-type PPIASE domain MIT1002_00784 PF03968 OstA-like protein MIT1002_00784 PF04453 LPS transport system D MIT1002_00785 PF05099 Tellurite resistance protein TerB MIT1002_00785 PF00226 DnaJ domain MIT1002_00786 PF00589 Phage integrase family MIT1002_00786 PF02899 Phage integrase, N-terminal SAM-like domain MIT1002_00787 PF13098 Thioredoxin-like domain MIT1002_00787 PF10411 Disulfide bond isomerase protein N-terminus MIT1002_00788 PF01368 DHH family MIT1002_00788 PF02272 DHHA1 domain MIT1002_00788 PF17768 RecJ OB domain MIT1002_00790 PF02565 Recombination protein O C terminal MIT1002_00790 PF11967 Recombination protein O N terminal MIT1002_00791 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MIT1002_00792 PF01648 4'-phosphopantetheinyl transferase superfamily MIT1002_00793 PF05958 tRNA (Uracil-5-)-methyltransferase MIT1002_00794 PF13291 ACT domain MIT1002_00794 PF04607 Region found in RelA / SpoT proteins MIT1002_00794 PF02824 TGS domain MIT1002_00795 PF03819 MazG nucleotide pyrophosphohydrolase domain MIT1002_00799 PF00106 short chain dehydrogenase MIT1002_00801 PF00501 AMP-binding enzyme MIT1002_00801 PF13193 AMP-binding enzyme C-terminal domain MIT1002_00803 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MIT1002_00805 PF00535 Glycosyl transferase family 2 MIT1002_00809 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00809 PF08521 Two-component sensor kinase N-terminal MIT1002_00809 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00810 PF00072 Response regulator receiver domain MIT1002_00810 PF00486 Transcriptional regulatory protein, C terminal MIT1002_00812 PF00572 Ribosomal protein L13 MIT1002_00813 PF00380 Ribosomal protein S9/S16 MIT1002_00814 PF00355 Rieske [2Fe-2S] domain MIT1002_00814 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MIT1002_00815 PF00032 Cytochrome b(C-terminal)/b6/petD MIT1002_00815 PF00033 Cytochrome b/b6/petB MIT1002_00816 PF02167 Cytochrome C1 family MIT1002_00817 PF00043 Glutathione S-transferase, C-terminal domain MIT1002_00817 PF02798 Glutathione S-transferase, N-terminal domain MIT1002_00818 PF04386 Stringent starvation protein B MIT1002_00821 PF00072 Response regulator receiver domain MIT1002_00821 PF00486 Transcriptional regulatory protein, C terminal MIT1002_00822 PF00571 CBS domain MIT1002_00822 PF01769 Divalent cation transporter MIT1002_00822 PF03448 MgtE intracellular N domain MIT1002_00823 PF00381 PTS HPr component phosphorylation site MIT1002_00824 PF03668 P-loop ATPase protein family MIT1002_00825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MIT1002_00826 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MIT1002_00827 PF04963 Sigma-54 factor, core binding domain MIT1002_00827 PF04552 Sigma-54, DNA binding domain MIT1002_00827 PF00309 Sigma-54 factor, Activator interacting domain (AID) MIT1002_00828 PF00005 ABC transporter MIT1002_00828 PF12399 Branched-chain amino acid ATP-binding cassette transporter MIT1002_00829 PF03968 OstA-like protein MIT1002_00832 PF00571 CBS domain MIT1002_00832 PF01380 SIS domain MIT1002_00833 PF01699 Sodium/calcium exchanger protein MIT1002_00834 PF00005 ABC transporter MIT1002_00835 PF02405 Permease MlaE MIT1002_00836 PF02470 MlaD protein MIT1002_00837 PF05494 MlaC protein MIT1002_00839 PF01722 BolA-like protein MIT1002_00840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MIT1002_00841 PF13180 PDZ domain MIT1002_00842 PF00595 PDZ domain MIT1002_00842 PF13180 PDZ domain MIT1002_00844 PF03969 AFG1-like ATPase MIT1002_00845 PF01709 Transcriptional regulator MIT1002_00846 PF00881 Nitroreductase family MIT1002_00849 PF02355 Protein export membrane protein MIT1002_00849 PF07549 SecD/SecF GG Motif MIT1002_00850 PF02080 TrkA-C domain MIT1002_00850 PF00999 Sodium/hydrogen exchanger family MIT1002_00850 PF03471 Transporter associated domain MIT1002_00853 PF00593 TonB dependent receptor MIT1002_00853 PF07715 TonB-dependent Receptor Plug Domain MIT1002_00854 PF00892 EamA-like transporter family MIT1002_00856 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_00856 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_00856 PF09308 LuxQ, periplasmic MIT1002_00856 PF00072 Response regulator receiver domain MIT1002_00857 PF13458 Periplasmic binding protein MIT1002_00860 PF02773 S-adenosylmethionine synthetase, C-terminal domain MIT1002_00860 PF02772 S-adenosylmethionine synthetase, central domain MIT1002_00860 PF00438 S-adenosylmethionine synthetase, N-terminal domain MIT1002_00861 PF02779 Transketolase, pyrimidine binding domain MIT1002_00861 PF02780 Transketolase, C-terminal domain MIT1002_00861 PF00456 Transketolase, thiamine diphosphate binding domain MIT1002_00862 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MIT1002_00862 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MIT1002_00863 PF00162 Phosphoglycerate kinase MIT1002_00864 PF00274 Fructose-bisphosphate aldolase class-I MIT1002_00866 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIT1002_00866 PF00529 HlyD membrane-fusion protein of T1SS MIT1002_00867 PF00873 AcrB/AcrD/AcrF family MIT1002_00868 PF02321 Outer membrane efflux protein MIT1002_00870 PF07676 WD40-like Beta Propeller Repeat MIT1002_00870 PF00326 Prolyl oligopeptidase family MIT1002_00871 PF02541 Ppx/GppA phosphatase family MIT1002_00872 PF13089 Polyphosphate kinase N-terminal domain MIT1002_00872 PF02503 Polyphosphate kinase middle domain MIT1002_00872 PF13090 Polyphosphate kinase C-terminal domain 2 MIT1002_00872 PF17941 Polyphosphate kinase C-terminal domain 1 MIT1002_00874 PF00528 Binding-protein-dependent transport system inner membrane component MIT1002_00875 PF00528 Binding-protein-dependent transport system inner membrane component MIT1002_00876 PF00005 ABC transporter MIT1002_00877 PF01895 PhoU domain MIT1002_00878 PF01384 Phosphate transporter family MIT1002_00881 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_00881 PF03466 LysR substrate binding domain MIT1002_00886 PF03006 Haemolysin-III related MIT1002_00888 PF01047 MarR family MIT1002_00889 PF02566 OsmC-like protein MIT1002_00890 PF01433 Peptidase family M1 domain MIT1002_00892 PF01548 Transposase MIT1002_00892 PF02371 Transposase IS116/IS110/IS902 family MIT1002_00893 PF09186 Domain of unknown function (DUF1949) MIT1002_00893 PF01205 Uncharacterized protein family UPF0029 MIT1002_00895 PF13426 PAS domain MIT1002_00895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_00895 PF08447 PAS fold MIT1002_00897 PF00149 Calcineurin-like phosphoesterase MIT1002_00897 PF12320 Type 5 capsule protein repressor C-terminal domain MIT1002_00898 PF13476 AAA domain MIT1002_00900 PF00375 Sodium:dicarboxylate symporter family MIT1002_00901 PF00491 Arginase family MIT1002_00902 PF01979 Amidohydrolase family MIT1002_00903 PF00392 Bacterial regulatory proteins, gntR family MIT1002_00903 PF07702 UTRA domain MIT1002_00904 PF17391 Urocanase N-terminal domain MIT1002_00904 PF17392 Urocanase C-terminal domain MIT1002_00904 PF01175 Urocanase Rossmann-like domain MIT1002_00905 PF00221 Aromatic amino acid lyase MIT1002_00908 PF02371 Transposase IS116/IS110/IS902 family MIT1002_00908 PF01548 Transposase MIT1002_00909 PF01869 BadF/BadG/BcrA/BcrD ATPase family MIT1002_00910 PF01979 Amidohydrolase family MIT1002_00912 PF00005 ABC transporter MIT1002_00912 PF12848 ABC transporter MIT1002_00915 PF00924 Mechanosensitive ion channel MIT1002_00918 PF07715 TonB-dependent Receptor Plug Domain MIT1002_00918 PF00593 TonB dependent receptor MIT1002_00919 PF13533 Biotin-lipoyl like MIT1002_00920 PF00005 ABC transporter MIT1002_00923 PF07690 Major Facilitator Superfamily MIT1002_00927 PF03150 Di-haem cytochrome c peroxidase MIT1002_00933 PF04172 LrgB-like family MIT1002_00934 PF00072 Response regulator receiver domain MIT1002_00939 PF06969 HemN C-terminal domain MIT1002_00939 PF04055 Radical SAM superfamily MIT1002_00940 PF01725 Ham1 family MIT1002_00941 PF00271 Helicase conserved C-terminal domain MIT1002_00941 PF00270 DEAD/DEAH box helicase MIT1002_00942 PF12627 Probable RNA and SrmB- binding site of polymerase A MIT1002_00942 PF01743 Poly A polymerase head domain MIT1002_00943 PF01471 Putative peptidoglycan binding domain MIT1002_00943 PF13401 AAA domain MIT1002_00945 PF11871 Domain of unknown function (DUF3391) MIT1002_00945 PF01966 HD domain MIT1002_00946 PF00694 Aconitase C-terminal domain MIT1002_00947 PF00330 Aconitase family (aconitate hydratase) MIT1002_00948 PF00180 Isocitrate/isopropylmalate dehydrogenase MIT1002_00949 PF00682 HMGL-like MIT1002_00949 PF08502 LeuA allosteric (dimerisation) domain MIT1002_00951 PF00113 Enolase, C-terminal TIM barrel domain MIT1002_00951 PF03952 Enolase, N-terminal domain MIT1002_00952 PF06418 CTP synthase N-terminus MIT1002_00952 PF00117 Glutamine amidotransferase class-I MIT1002_00953 PF00488 MutS domain V MIT1002_00953 PF05188 MutS domain II MIT1002_00953 PF01624 MutS domain I MIT1002_00953 PF05190 MutS family domain IV MIT1002_00953 PF05192 MutS domain III MIT1002_00954 PF02464 Competence-damaged protein MIT1002_00955 PF00154 recA bacterial DNA recombination protein MIT1002_00956 PF00005 ABC transporter MIT1002_00957 PF12679 ABC-2 family transporter protein MIT1002_00960 PF00005 ABC transporter MIT1002_00961 PF03379 CcmB protein MIT1002_00962 PF01578 Cytochrome C assembly protein MIT1002_00963 PF04995 Heme exporter protein D (CcmD) MIT1002_00964 PF03100 CcmE MIT1002_00965 PF01578 Cytochrome C assembly protein MIT1002_00965 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MIT1002_00966 PF08534 Redoxin MIT1002_00967 PF03918 Cytochrome C biogenesis protein MIT1002_00969 PF04333 MlaA lipoprotein MIT1002_00970 PF16363 GDP-mannose 4,6 dehydratase MIT1002_00972 PF00854 POT family MIT1002_00974 PF00005 ABC transporter MIT1002_00976 PF10531 SLBB domain MIT1002_00976 PF02563 Polysaccharide biosynthesis/export protein MIT1002_00978 PF00953 Glycosyl transferase family 4 MIT1002_00979 PF00535 Glycosyl transferase family 2 MIT1002_00981 PF00483 Nucleotidyl transferase MIT1002_00982 PF10531 SLBB domain MIT1002_00983 PF00180 Isocitrate/isopropylmalate dehydrogenase MIT1002_00983 PF18324 Hypothetical protein TT1725 MIT1002_00986 PF11892 Domain of unknown function (DUF3412) MIT1002_00986 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MIT1002_00986 PF03641 Possible lysine decarboxylase MIT1002_00987 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_00988 PF14489 QueF-like protein MIT1002_00988 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MIT1002_00989 PF07348 Syd protein (SUKH-2) MIT1002_00993 PF00483 Nucleotidyl transferase MIT1002_00994 PF00011 Hsp20/alpha crystallin family MIT1002_00998 PF00849 RNA pseudouridylate synthase MIT1002_00999 PF00258 Flavodoxin MIT1002_01000 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MIT1002_01000 PF00132 Bacterial transferase hexapeptide (six repeats) MIT1002_01000 PF14602 Hexapeptide repeat of succinyl-transferase MIT1002_01001 PF08335 GlnD PII-uridylyltransferase MIT1002_01001 PF01966 HD domain MIT1002_01001 PF01909 Nucleotidyltransferase domain MIT1002_01002 PF00557 Metallopeptidase family M24 MIT1002_01004 PF00318 Ribosomal protein S2 MIT1002_01005 PF00889 Elongation factor TS MIT1002_01006 PF00696 Amino acid kinase family MIT1002_01007 PF01765 Ribosome recycling factor MIT1002_01008 PF01255 Putative undecaprenyl diphosphate synthase MIT1002_01010 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MIT1002_01010 PF13288 DXP reductoisomerase C-terminal domain MIT1002_01010 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MIT1002_01011 PF02163 Peptidase family M50 MIT1002_01011 PF17820 PDZ domain MIT1002_01012 PF01103 Surface antigen MIT1002_01012 PF07244 Surface antigen variable number repeat MIT1002_01013 PF03938 Outer membrane protein (OmpH-like) MIT1002_01014 PF07977 FabA-like domain MIT1002_01015 PF00132 Bacterial transferase hexapeptide (six repeats) MIT1002_01015 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MIT1002_01016 PF02684 Lipid-A-disaccharide synthetase MIT1002_01017 PF01351 Ribonuclease HII MIT1002_01018 PF07733 Bacterial DNA polymerase III alpha NTPase domain MIT1002_01018 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MIT1002_01018 PF01336 OB-fold nucleic acid binding domain MIT1002_01018 PF02811 PHP domain MIT1002_01018 PF14579 Helix-hairpin-helix motif MIT1002_01019 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MIT1002_01020 PF09179 TilS substrate binding domain MIT1002_01020 PF11734 TilS substrate C-terminal domain MIT1002_01020 PF01171 PP-loop family MIT1002_01021 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01021 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01021 PF00563 EAL domain MIT1002_01022 PF00999 Sodium/hydrogen exchanger family MIT1002_01022 PF02080 TrkA-C domain MIT1002_01022 PF02254 TrkA-N domain MIT1002_01024 PF14437 MafB19-like deaminase MIT1002_01026 PF01464 Transglycosylase SLT domain MIT1002_01026 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIT1002_01027 PF02769 AIR synthase related protein, C-terminal domain MIT1002_01027 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MIT1002_01027 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MIT1002_01029 PF01713 Smr domain MIT1002_01037 PF00072 Response regulator receiver domain MIT1002_01037 PF01584 CheW-like domain MIT1002_01038 PF01739 CheR methyltransferase, SAM binding domain MIT1002_01038 PF03705 CheR methyltransferase, all-alpha domain MIT1002_01039 PF00460 Flagella basal body rod protein MIT1002_01040 PF00460 Flagella basal body rod protein MIT1002_01040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MIT1002_01041 PF03963 Flagellar hook capping protein - N-terminal region MIT1002_01041 PF13860 FlgD Ig-like domain MIT1002_01041 PF13861 FlgD Tudor-like domain MIT1002_01042 PF07559 Flagellar basal body protein FlaE MIT1002_01042 PF00460 Flagella basal body rod protein MIT1002_01042 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MIT1002_01043 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MIT1002_01043 PF00460 Flagella basal body rod protein MIT1002_01044 PF00460 Flagella basal body rod protein MIT1002_01044 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MIT1002_01046 PF00460 Flagella basal body rod protein MIT1002_01046 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MIT1002_01047 PF02107 Flagellar L-ring protein MIT1002_01048 PF02119 Flagellar P-ring protein MIT1002_01049 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MIT1002_01049 PF10135 Rod binding protein MIT1002_01051 PF00669 Bacterial flagellin N-terminal helical region MIT1002_01053 PF00700 Bacterial flagellin C-terminal helical region MIT1002_01053 PF00669 Bacterial flagellin N-terminal helical region MIT1002_01053 PF07196 Flagellin hook IN motif MIT1002_01054 PF00669 Bacterial flagellin N-terminal helical region MIT1002_01054 PF07196 Flagellin hook IN motif MIT1002_01054 PF00700 Bacterial flagellin C-terminal helical region MIT1002_01056 PF02465 Flagellar hook-associated protein 2 N-terminus MIT1002_01056 PF07195 Flagellar hook-associated protein 2 C-terminus MIT1002_01056 PF07196 Flagellin hook IN motif MIT1002_01061 PF00117 Glutamine amidotransferase class-I MIT1002_01065 PF01527 Transposase MIT1002_01067 PF13276 HTH-like domain MIT1002_01067 PF13333 Integrase core domain MIT1002_01067 PF00665 Integrase core domain MIT1002_01068 PF00665 Integrase core domain MIT1002_01068 PF13936 Helix-turn-helix domain MIT1002_01069 PF13936 Helix-turn-helix domain MIT1002_01069 PF00665 Integrase core domain MIT1002_01070 PF13936 Helix-turn-helix domain MIT1002_01070 PF00665 Integrase core domain MIT1002_01071 PF01527 Transposase MIT1002_01072 PF00410 Ribosomal protein S8 MIT1002_01073 PF08666 SAF domain MIT1002_01073 PF03102 NeuB family MIT1002_01077 PF02348 Cytidylyltransferase MIT1002_01078 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MIT1002_01079 PF02719 Polysaccharide biosynthesis protein MIT1002_01080 PF00700 Bacterial flagellin C-terminal helical region MIT1002_01080 PF00669 Bacterial flagellin N-terminal helical region MIT1002_01081 PF00158 Sigma-54 interaction domain MIT1002_01081 PF06490 Flagellar regulatory protein FleQ MIT1002_01081 PF02954 Bacterial regulatory protein, Fis family MIT1002_01082 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01082 PF13188 PAS domain MIT1002_01082 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01083 PF02954 Bacterial regulatory protein, Fis family MIT1002_01083 PF00072 Response regulator receiver domain MIT1002_01083 PF00158 Sigma-54 interaction domain MIT1002_01084 PF02049 Flagellar hook-basal body complex protein FliE MIT1002_01085 PF01514 Secretory protein of YscJ/FliF family MIT1002_01085 PF08345 Flagellar M-ring protein C-terminal MIT1002_01086 PF14842 FliG N-terminal domain MIT1002_01086 PF01706 FliG C-terminal domain MIT1002_01086 PF14841 FliG middle domain MIT1002_01088 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIT1002_01088 PF18269 T3SS EscN ATPase C-terminal domain MIT1002_01092 PF02154 Flagellar motor switch protein FliM MIT1002_01092 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MIT1002_01093 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MIT1002_01094 PF04347 Flagellar biosynthesis protein, FliO MIT1002_01095 PF00813 FliP family MIT1002_01096 PF01313 Bacterial export proteins, family 3 MIT1002_01097 PF01311 Bacterial export proteins, family 1 MIT1002_01098 PF01312 FlhB HrpN YscU SpaS Family MIT1002_01100 PF00771 FHIPEP family MIT1002_01101 PF00448 SRP54-type protein, GTPase domain MIT1002_01102 PF10609 NUBPL iron-transfer P-loop NTPase MIT1002_01103 PF04542 Sigma-70 region 2 MIT1002_01103 PF04539 Sigma-70 region 3 MIT1002_01103 PF04545 Sigma-70, region 4 MIT1002_01104 PF00072 Response regulator receiver domain MIT1002_01105 PF04344 Chemotaxis phosphatase, CheZ MIT1002_01106 PF01584 CheW-like domain MIT1002_01106 PF02895 Signal transducing histidine kinase, homodimeric domain MIT1002_01106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01106 PF01627 Hpt domain MIT1002_01106 PF00072 Response regulator receiver domain MIT1002_01107 PF01339 CheB methylesterase MIT1002_01107 PF00072 Response regulator receiver domain MIT1002_01108 PF13614 AAA domain MIT1002_01110 PF01584 CheW-like domain MIT1002_01112 PF04204 Homoserine O-succinyltransferase MIT1002_01113 PF02310 B12 binding domain MIT1002_01113 PF02607 B12 binding domain MIT1002_01113 PF02965 Vitamin B12 dependent methionine synthase, activation domain MIT1002_01113 PF02574 Homocysteine S-methyltransferase MIT1002_01113 PF00809 Pterin binding enzyme MIT1002_01114 PF00809 Pterin binding enzyme MIT1002_01114 PF02574 Homocysteine S-methyltransferase MIT1002_01114 PF02965 Vitamin B12 dependent methionine synthase, activation domain MIT1002_01114 PF02607 B12 binding domain MIT1002_01114 PF02310 B12 binding domain MIT1002_01116 PF06865 Pyrimidine/purine nucleoside phosphorylase MIT1002_01117 PF02371 Transposase IS116/IS110/IS902 family MIT1002_01117 PF01548 Transposase MIT1002_01118 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_01118 PF00672 HAMP domain MIT1002_01118 PF02743 Cache domain MIT1002_01119 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_01119 PF03466 LysR substrate binding domain MIT1002_01120 PF03466 LysR substrate binding domain MIT1002_01120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_01121 PF00484 Carbonic anhydrase MIT1002_01122 PF00916 Sulfate permease family MIT1002_01122 PF01740 STAS domain MIT1002_01124 PF00440 Bacterial regulatory proteins, tetR family MIT1002_01124 PF13977 BetI-type transcriptional repressor, C-terminal MIT1002_01125 PF01431 Peptidase family M13 MIT1002_01125 PF05649 Peptidase family M13 MIT1002_01127 PF02631 RecX family MIT1002_01128 PF01411 tRNA synthetases class II (A) MIT1002_01128 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MIT1002_01128 PF02272 DHHA1 domain MIT1002_01129 PF02599 Global regulator protein family MIT1002_01135 PF00364 Biotin-requiring enzyme MIT1002_01135 PF00682 HMGL-like MIT1002_01135 PF02436 Conserved carboxylase domain MIT1002_01136 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit MIT1002_01137 PF00005 ABC transporter MIT1002_01138 PF00005 ABC transporter MIT1002_01138 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MIT1002_01139 PF12911 N-terminal TM domain of oligopeptide transport permease C MIT1002_01139 PF00528 Binding-protein-dependent transport system inner membrane component MIT1002_01140 PF00528 Binding-protein-dependent transport system inner membrane component MIT1002_01141 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MIT1002_01142 PF02954 Bacterial regulatory protein, Fis family MIT1002_01142 PF00158 Sigma-54 interaction domain MIT1002_01143 PF04012 PspA/IM30 family MIT1002_01146 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MIT1002_01147 PF00158 Sigma-54 interaction domain MIT1002_01147 PF18024 Helix-turn-helix domain MIT1002_01149 PF14497 Glutathione S-transferase, C-terminal domain MIT1002_01149 PF02798 Glutathione S-transferase, N-terminal domain MIT1002_01150 PF01037 Lrp/AsnC ligand binding domain MIT1002_01151 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MIT1002_01151 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MIT1002_01154 PF03301 Tryptophan 2,3-dioxygenase MIT1002_01155 PF00593 TonB dependent receptor MIT1002_01156 PF13181 Tetratricopeptide repeat MIT1002_01157 PF00593 TonB dependent receptor MIT1002_01157 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01164 PF01618 MotA/TolQ/ExbB proton channel family MIT1002_01165 PF01618 MotA/TolQ/ExbB proton channel family MIT1002_01166 PF02472 Biopolymer transport protein ExbD/TolR MIT1002_01167 PF03544 Gram-negative bacterial TonB protein C-terminal MIT1002_01169 PF05127 Helicase MIT1002_01169 PF17176 tRNA-binding domain MIT1002_01169 PF08351 Domain of unknown function (DUF1726) MIT1002_01169 PF13718 GNAT acetyltransferase 2 MIT1002_01175 PF01636 Phosphotransferase enzyme family MIT1002_01178 PF00583 Acetyltransferase (GNAT) family MIT1002_01180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_01180 PF03466 LysR substrate binding domain MIT1002_01181 PF07690 Major Facilitator Superfamily MIT1002_01184 PF01548 Transposase MIT1002_01184 PF02371 Transposase IS116/IS110/IS902 family MIT1002_01185 PF02371 Transposase IS116/IS110/IS902 family MIT1002_01185 PF01548 Transposase MIT1002_01187 PF13533 Biotin-lipoyl like MIT1002_01188 PF01047 MarR family MIT1002_01189 PF00072 Response regulator receiver domain MIT1002_01189 PF04397 LytTr DNA-binding domain MIT1002_01190 PF07694 5TMR of 5TMR-LYT MIT1002_01190 PF06580 Histidine kinase MIT1002_01191 PF02554 Carbon starvation protein CstA MIT1002_01192 PF03144 Elongation factor Tu domain 2 MIT1002_01192 PF16658 Class II release factor RF3, C-terminal domain MIT1002_01192 PF00009 Elongation factor Tu GTP binding domain MIT1002_01193 PF03485 Arginyl tRNA synthetase N terminal domain MIT1002_01193 PF05746 DALR anticodon binding domain MIT1002_01193 PF00750 tRNA synthetases class I (R) MIT1002_01195 PF13181 Tetratricopeptide repeat MIT1002_01197 PF13360 PQQ-like domain MIT1002_01197 PF01011 PQQ enzyme repeat MIT1002_01198 PF00072 Response regulator receiver domain MIT1002_01198 PF00196 Bacterial regulatory proteins, luxR family MIT1002_01199 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01199 PF00563 EAL domain MIT1002_01199 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01201 PF00291 Pyridoxal-phosphate dependent enzyme MIT1002_01203 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01204 PF04224 Protein of unknown function, DUF417 MIT1002_01208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_01208 PF03466 LysR substrate binding domain MIT1002_01209 PF05368 NmrA-like family MIT1002_01211 PF00487 Fatty acid desaturase MIT1002_01212 PF00042 Globin MIT1002_01212 PF00175 Oxidoreductase NAD-binding domain MIT1002_01212 PF00970 Oxidoreductase FAD-binding domain MIT1002_01213 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIT1002_01215 PF03462 PCRF domain MIT1002_01215 PF00472 RF-1 domain MIT1002_01216 PF00152 tRNA synthetases class II (D, K and N) MIT1002_01216 PF01336 OB-fold nucleic acid binding domain MIT1002_01217 PF02558 Ketopantoate reductase PanE/ApbA MIT1002_01217 PF08546 Ketopantoate reductase PanE/ApbA C terminal MIT1002_01219 PF00849 RNA pseudouridylate synthase MIT1002_01221 PF00675 Insulinase (Peptidase family M16) MIT1002_01221 PF05193 Peptidase M16 inactive domain MIT1002_01222 PF04262 Glutamate-cysteine ligase MIT1002_01227 PF01713 Smr domain MIT1002_01228 PF05175 Methyltransferase small domain MIT1002_01229 PF01264 Chorismate synthase MIT1002_01231 PF04293 SpoVR like protein MIT1002_01232 PF04285 Protein of unknown function (DUF444) MIT1002_01233 PF08298 PrkA AAA domain MIT1002_01233 PF06798 PrkA serine protein kinase C-terminal domain MIT1002_01234 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MIT1002_01234 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MIT1002_01235 PF00462 Glutaredoxin MIT1002_01236 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01236 PF00593 TonB dependent receptor MIT1002_01240 PF04324 BFD-like [2Fe-2S] binding domain MIT1002_01241 PF10417 C-terminal domain of 1-Cys peroxiredoxin MIT1002_01241 PF00578 AhpC/TSA family MIT1002_01242 PF00929 Exonuclease MIT1002_01243 PF18393 MotY N-terminal domain MIT1002_01243 PF00691 OmpA family MIT1002_01244 PF03009 Glycerophosphoryl diester phosphodiesterase family MIT1002_01245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIT1002_01246 PF00106 short chain dehydrogenase MIT1002_01248 PF00313 'Cold-shock' DNA-binding domain MIT1002_01250 PF02225 PA domain MIT1002_01250 PF04389 Peptidase family M28 MIT1002_01251 PF10576 Iron-sulfur binding domain of endonuclease III MIT1002_01251 PF00633 Helix-hairpin-helix motif MIT1002_01251 PF00730 HhH-GPD superfamily base excision DNA repair protein MIT1002_01252 PF02508 Rnf-Nqr subunit, membrane protein MIT1002_01253 PF04205 FMN-binding domain MIT1002_01254 PF03116 NQR2, RnfD, RnfE family MIT1002_01255 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MIT1002_01255 PF12838 4Fe-4S dicluster domain MIT1002_01255 PF13375 RnfC Barrel sandwich hybrid domain MIT1002_01255 PF10531 SLBB domain MIT1002_01256 PF04060 Putative Fe-S cluster MIT1002_01257 PF02508 Rnf-Nqr subunit, membrane protein MIT1002_01260 PF01554 MatE MIT1002_01261 PF00271 Helicase conserved C-terminal domain MIT1002_01261 PF17757 UvrB interaction domain MIT1002_01261 PF04851 Type III restriction enzyme, res subunit MIT1002_01261 PF12344 Ultra-violet resistance protein B MIT1002_01261 PF02151 UvrB/uvrC motif MIT1002_01263 PF06508 Queuosine biosynthesis protein QueC MIT1002_01264 PF04055 Radical SAM superfamily MIT1002_01266 PF00733 Asparagine synthase MIT1002_01266 PF13537 Glutamine amidotransferase domain MIT1002_01270 PF03600 Citrate transporter MIT1002_01270 PF02080 TrkA-C domain MIT1002_01271 PF00009 Elongation factor Tu GTP binding domain MIT1002_01272 PF00459 Inositol monophosphatase family MIT1002_01274 PF01507 Phosphoadenosine phosphosulfate reductase family MIT1002_01275 PF00474 Sodium:solute symporter family MIT1002_01276 PF00072 Response regulator receiver domain MIT1002_01276 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01278 PF04542 Sigma-70 region 2 MIT1002_01278 PF08281 Sigma-70, region 4 MIT1002_01281 PF13519 von Willebrand factor type A domain MIT1002_01281 PF07584 Aerotolerance regulator N-terminal MIT1002_01282 PF00092 von Willebrand factor type A domain MIT1002_01284 PF01882 Protein of unknown function DUF58 MIT1002_01285 PF07726 ATPase family associated with various cellular activities (AAA) MIT1002_01285 PF17863 AAA lid domain MIT1002_01286 PF00108 Thiolase, N-terminal domain MIT1002_01286 PF02803 Thiolase, C-terminal domain MIT1002_01287 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MIT1002_01287 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MIT1002_01287 PF00378 Enoyl-CoA hydratase/isomerase MIT1002_01290 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01290 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01290 PF00563 EAL domain MIT1002_01291 PF00675 Insulinase (Peptidase family M16) MIT1002_01291 PF05193 Peptidase M16 inactive domain MIT1002_01292 PF00300 Histidine phosphatase superfamily (branch 1) MIT1002_01294 PF03471 Transporter associated domain MIT1002_01294 PF00571 CBS domain MIT1002_01294 PF01595 Cyclin M transmembrane N-terminal domain MIT1002_01295 PF01578 Cytochrome C assembly protein MIT1002_01296 PF00448 SRP54-type protein, GTPase domain MIT1002_01296 PF02881 SRP54-type protein, helical bundle domain MIT1002_01296 PF02978 Signal peptide binding domain MIT1002_01303 PF00873 AcrB/AcrD/AcrF family MIT1002_01304 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIT1002_01305 PF00664 ABC transporter transmembrane region MIT1002_01305 PF00005 ABC transporter MIT1002_01308 PF00886 Ribosomal protein S16 MIT1002_01309 PF05239 PRC-barrel domain MIT1002_01309 PF01782 RimM N-terminal domain MIT1002_01310 PF01746 tRNA (Guanine-1)-methyltransferase MIT1002_01311 PF01245 Ribosomal protein L19 MIT1002_01312 PF03458 UPF0126 domain MIT1002_01313 PF00378 Enoyl-CoA hydratase/isomerase MIT1002_01314 PF00793 DAHP synthetase I family MIT1002_01315 PF01817 Chorismate mutase type II MIT1002_01315 PF02153 Prephenate dehydrogenase MIT1002_01316 PF01817 Chorismate mutase type II MIT1002_01316 PF00800 Prephenate dehydratase MIT1002_01317 PF00072 Response regulator receiver domain MIT1002_01318 PF01253 Translation initiation factor SUI1 MIT1002_01320 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01320 PF00072 Response regulator receiver domain MIT1002_01322 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01322 PF00563 EAL domain MIT1002_01322 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01324 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01326 PF00072 Response regulator receiver domain MIT1002_01326 PF00158 Sigma-54 interaction domain MIT1002_01329 PF00152 tRNA synthetases class II (D, K and N) MIT1002_01329 PF01336 OB-fold nucleic acid binding domain MIT1002_01329 PF02938 GAD domain MIT1002_01330 PF00293 NUDIX domain MIT1002_01331 PF02075 Crossover junction endodeoxyribonuclease RuvC MIT1002_01332 PF07499 RuvA, C-terminal domain MIT1002_01332 PF01330 RuvA N terminal domain MIT1002_01333 PF17864 RuvB AAA lid domain MIT1002_01333 PF05491 RuvB C-terminal winged helix domain MIT1002_01333 PF05496 Holliday junction DNA helicase RuvB P-loop domain MIT1002_01334 PF03061 Thioesterase superfamily MIT1002_01335 PF01618 MotA/TolQ/ExbB proton channel family MIT1002_01336 PF02472 Biopolymer transport protein ExbD/TolR MIT1002_01338 PF07676 WD40-like Beta Propeller Repeat MIT1002_01338 PF04052 TolB amino-terminal domain MIT1002_01339 PF00691 OmpA family MIT1002_01340 PF16331 TolA binding protein trimerisation MIT1002_01340 PF13174 Tetratricopeptide repeat MIT1002_01344 PF02445 Quinolinate synthetase A protein MIT1002_01347 PF01734 Patatin-like phospholipase MIT1002_01348 PF08546 Ketopantoate reductase PanE/ApbA C terminal MIT1002_01348 PF02558 Ketopantoate reductase PanE/ApbA MIT1002_01350 PF00072 Response regulator receiver domain MIT1002_01350 PF09308 LuxQ, periplasmic MIT1002_01350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01350 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01352 PF02774 Semialdehyde dehydrogenase, dimerisation domain MIT1002_01352 PF01118 Semialdehyde dehydrogenase, NAD binding domain MIT1002_01353 PF01292 Prokaryotic cytochrome b561 MIT1002_01354 PF00563 EAL domain MIT1002_01354 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01354 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01357 PF01863 Protein of unknown function DUF45 MIT1002_01359 PF00873 AcrB/AcrD/AcrF family MIT1002_01361 PF00440 Bacterial regulatory proteins, tetR family MIT1002_01361 PF08361 MAATS-type transcriptional repressor, C-terminal region MIT1002_01362 PF00593 TonB dependent receptor MIT1002_01362 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01364 PF00873 AcrB/AcrD/AcrF family MIT1002_01366 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01368 PF02470 MlaD protein MIT1002_01369 PF04403 Paraquat-inducible protein A MIT1002_01371 PF00152 tRNA synthetases class II (D, K and N) MIT1002_01371 PF01336 OB-fold nucleic acid binding domain MIT1002_01373 PF01699 Sodium/calcium exchanger protein MIT1002_01374 PF18030 RimK PreATP-grasp domain MIT1002_01374 PF08443 RimK-like ATP-grasp domain MIT1002_01378 PF00202 Aminotransferase class-III MIT1002_01379 PF06968 Biotin and Thiamin Synthesis associated domain MIT1002_01379 PF04055 Radical SAM superfamily MIT1002_01380 PF00155 Aminotransferase class I and II MIT1002_01381 PF08241 Methyltransferase domain MIT1002_01383 PF03575 Peptidase family S51 MIT1002_01384 PF01451 Low molecular weight phosphotyrosine protein phosphatase MIT1002_01385 PF01032 FecCD transport family MIT1002_01386 PF00005 ABC transporter MIT1002_01387 PF01474 Class-II DAHP synthetase family MIT1002_01388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01388 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01388 PF02702 Osmosensitive K+ channel His kinase sensor domain MIT1002_01388 PF13493 Domain of unknown function (DUF4118) MIT1002_01389 PF00486 Transcriptional regulatory protein, C terminal MIT1002_01389 PF00072 Response regulator receiver domain MIT1002_01390 PF02254 TrkA-N domain MIT1002_01390 PF02080 TrkA-C domain MIT1002_01391 PF02386 Cation transport protein MIT1002_01394 PF00664 ABC transporter transmembrane region MIT1002_01394 PF00005 ABC transporter MIT1002_01395 PF06463 Molybdenum Cofactor Synthesis C MIT1002_01395 PF04055 Radical SAM superfamily MIT1002_01397 PF00072 Response regulator receiver domain MIT1002_01397 PF00486 Transcriptional regulatory protein, C terminal MIT1002_01402 PF00749 tRNA synthetases class I (E and Q), catalytic domain MIT1002_01411 PF01207 Dihydrouridine synthase (Dus) MIT1002_01414 PF13472 GDSL-like Lipase/Acylhydrolase family MIT1002_01415 PF00005 ABC transporter MIT1002_01417 PF08338 Domain of unknown function (DUF1731) MIT1002_01417 PF01370 NAD dependent epimerase/dehydratase family MIT1002_01418 PF02152 Dihydroneopterin aldolase MIT1002_01419 PF01594 AI-2E family transporter MIT1002_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01420 PF08918 PhoQ Sensor MIT1002_01421 PF00072 Response regulator receiver domain MIT1002_01421 PF00486 Transcriptional regulatory protein, C terminal MIT1002_01424 PF03795 YCII-related domain MIT1002_01425 PF00290 Tryptophan synthase alpha chain MIT1002_01426 PF00291 Pyridoxal-phosphate dependent enzyme MIT1002_01427 PF00218 Indole-3-glycerol phosphate synthase MIT1002_01427 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MIT1002_01428 PF02885 Glycosyl transferase family, helical bundle domain MIT1002_01428 PF00591 Glycosyl transferase family, a/b domain MIT1002_01429 PF00117 Glutamine amidotransferase class-I MIT1002_01430 PF04715 Anthranilate synthase component I, N terminal region MIT1002_01430 PF00425 chorismate binding enzyme MIT1002_01431 PF02811 PHP domain MIT1002_01432 PF01300 Telomere recombination MIT1002_01433 PF02616 Segregation and condensation protein ScpA MIT1002_01434 PF04079 Segregation and condensation complex subunit ScpB MIT1002_01435 PF01479 S4 domain MIT1002_01435 PF00849 RNA pseudouridylate synthase MIT1002_01436 PF00248 Aldo/keto reductase family MIT1002_01437 PF14602 Hexapeptide repeat of succinyl-transferase MIT1002_01437 PF12464 Maltose acetyltransferase MIT1002_01439 PF03960 ArsC family MIT1002_01440 PF04286 Protein of unknown function (DUF445) MIT1002_01441 PF05724 Thiopurine S-methyltransferase (TPMT) MIT1002_01442 PF04355 SmpA / OmlA family MIT1002_01443 PF02463 RecF/RecN/SMC N terminal domain MIT1002_01444 PF00210 Ferritin-like domain MIT1002_01445 PF01513 ATP-NAD kinase MIT1002_01447 PF00465 Iron-containing alcohol dehydrogenase MIT1002_01450 PF00561 alpha/beta hydrolase fold MIT1002_01452 PF00593 TonB dependent receptor MIT1002_01452 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01453 PF00196 Bacterial regulatory proteins, luxR family MIT1002_01453 PF00072 Response regulator receiver domain MIT1002_01454 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIT1002_01454 PF00072 Response regulator receiver domain MIT1002_01454 PF01627 Hpt domain MIT1002_01454 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01454 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01456 PF01025 GrpE MIT1002_01457 PF00012 Hsp70 protein MIT1002_01458 PF00226 DnaJ domain MIT1002_01458 PF01556 DnaJ C terminal domain MIT1002_01458 PF00684 DnaJ central domain MIT1002_01459 PF01322 Cytochrome C' MIT1002_01462 PF13426 PAS domain MIT1002_01462 PF00563 EAL domain MIT1002_01462 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01463 PF16177 Acetyl-coenzyme A synthetase N-terminus MIT1002_01463 PF13193 AMP-binding enzyme C-terminal domain MIT1002_01463 PF00501 AMP-binding enzyme MIT1002_01465 PF05173 Dihydrodipicolinate reductase, C-terminus MIT1002_01465 PF01113 Dihydrodipicolinate reductase, N-terminus MIT1002_01466 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MIT1002_01466 PF00117 Glutamine amidotransferase class-I MIT1002_01467 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MIT1002_01467 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MIT1002_01467 PF02142 MGS-like domain MIT1002_01468 PF03449 Transcription elongation factor, N-terminal MIT1002_01468 PF01272 Transcription elongation factor, GreA/GreB, C-term MIT1002_01472 PF00011 Hsp20/alpha crystallin family MIT1002_01473 PF00871 Acetokinase family MIT1002_01474 PF07085 DRTGG domain MIT1002_01474 PF01515 Phosphate acetyl/butaryl transferase MIT1002_01475 PF01979 Amidohydrolase family MIT1002_01476 PF00795 Carbon-nitrogen hydrolase MIT1002_01477 PF00571 CBS domain MIT1002_01477 PF03471 Transporter associated domain MIT1002_01478 PF02130 Uncharacterized protein family UPF0054 MIT1002_01479 PF02562 PhoH-like protein MIT1002_01480 PF00919 Uncharacterized protein family UPF0004 MIT1002_01480 PF04055 Radical SAM superfamily MIT1002_01480 PF01938 TRAM domain MIT1002_01481 PF01494 FAD binding domain MIT1002_01486 PF01548 Transposase MIT1002_01486 PF02371 Transposase IS116/IS110/IS902 family MIT1002_01490 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01490 PF00593 TonB dependent receptor MIT1002_01491 PF03061 Thioesterase superfamily MIT1002_01492 PF01613 Flavin reductase like domain MIT1002_01494 PF01235 Sodium:alanine symporter family MIT1002_01503 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MIT1002_01504 PF01926 50S ribosome-binding GTPase MIT1002_01504 PF06071 Protein of unknown function (DUF933) MIT1002_01505 PF01195 Peptidyl-tRNA hydrolase MIT1002_01506 PF01386 Ribosomal L25p family MIT1002_01506 PF14693 Ribosomal protein TL5, C-terminal domain MIT1002_01507 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_01507 PF00107 Zinc-binding dehydrogenase MIT1002_01509 PF14572 Phosphoribosyl synthetase-associated domain MIT1002_01509 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MIT1002_01511 PF00288 GHMP kinases N terminal domain MIT1002_01511 PF08544 GHMP kinases C terminal MIT1002_01512 PF03550 Outer membrane lipoprotein LolB MIT1002_01513 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MIT1002_01513 PF01488 Shikimate / quinate 5-dehydrogenase MIT1002_01513 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MIT1002_01514 PF00472 RF-1 domain MIT1002_01514 PF03462 PCRF domain MIT1002_01515 PF13847 Methyltransferase domain MIT1002_01515 PF17827 PrmC N-terminal domain MIT1002_01516 PF11849 Domain of unknown function (DUF3369) MIT1002_01517 PF04247 Invasion gene expression up-regulator, SirB MIT1002_01518 PF00793 DAHP synthetase I family MIT1002_01520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_01520 PF03466 LysR substrate binding domain MIT1002_01522 PF04241 Protein of unknown function (DUF423) MIT1002_01523 PF01728 FtsJ-like methyltransferase MIT1002_01523 PF18125 RlmM ferredoxin-like domain MIT1002_01524 PF03764 Elongation factor G, domain IV MIT1002_01524 PF03144 Elongation factor Tu domain 2 MIT1002_01524 PF00679 Elongation factor G C-terminus MIT1002_01524 PF00009 Elongation factor Tu GTP binding domain MIT1002_01524 PF14492 Elongation Factor G, domain II MIT1002_01527 PF02560 Cyanate lyase C-terminal domain MIT1002_01528 PF00069 Protein kinase domain MIT1002_01529 PF01226 Formate/nitrite transporter MIT1002_01530 PF01841 Transglutaminase-like superfamily MIT1002_01530 PF13559 Domain of unknown function (DUF4129) MIT1002_01530 PF11992 Domain of unknown function (DUF3488) MIT1002_01532 PF17863 AAA lid domain MIT1002_01532 PF07726 ATPase family associated with various cellular activities (AAA) MIT1002_01533 PF17206 SeqA protein N-terminal domain MIT1002_01533 PF03925 SeqA protein C-terminal domain MIT1002_01534 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MIT1002_01534 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MIT1002_01534 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MIT1002_01534 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MIT1002_01535 PF00343 Carbohydrate phosphorylase MIT1002_01537 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01537 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01537 PF00563 EAL domain MIT1002_01538 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MIT1002_01540 PF01906 Putative heavy-metal-binding MIT1002_01541 PF00326 Prolyl oligopeptidase family MIT1002_01542 PF00375 Sodium:dicarboxylate symporter family MIT1002_01545 PF01546 Peptidase family M20/M25/M40 MIT1002_01545 PF07687 Peptidase dimerisation domain MIT1002_01546 PF03960 ArsC family MIT1002_01549 PF01695 IstB-like ATP binding protein MIT1002_01550 PF00665 Integrase core domain MIT1002_01553 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIT1002_01554 PF04209 homogentisate 1,2-dioxygenase MIT1002_01558 PF00563 EAL domain MIT1002_01558 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01558 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01559 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01559 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01559 PF00563 EAL domain MIT1002_01560 PF12706 Beta-lactamase superfamily domain MIT1002_01561 PF00873 AcrB/AcrD/AcrF family MIT1002_01563 PF02254 TrkA-N domain MIT1002_01563 PF00999 Sodium/hydrogen exchanger family MIT1002_01564 PF02525 Flavodoxin-like fold MIT1002_01566 PF01638 HxlR-like helix-turn-helix MIT1002_01568 PF00563 EAL domain MIT1002_01568 PF05231 MASE1 MIT1002_01568 PF08447 PAS fold MIT1002_01568 PF08448 PAS fold MIT1002_01568 PF13426 PAS domain MIT1002_01568 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01570 PF01979 Amidohydrolase family MIT1002_01571 PF00576 HIUase/Transthyretin family MIT1002_01574 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MIT1002_01574 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MIT1002_01575 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MIT1002_01575 PF00111 2Fe-2S iron-sulfur cluster binding domain MIT1002_01575 PF01799 [2Fe-2S] binding domain MIT1002_01575 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MIT1002_01576 PF08362 YcdC-like protein, C-terminal region MIT1002_01576 PF00440 Bacterial regulatory proteins, tetR family MIT1002_01579 PF00860 Permease family MIT1002_01580 PF00962 Adenosine/AMP deaminase MIT1002_01581 PF02371 Transposase IS116/IS110/IS902 family MIT1002_01581 PF01548 Transposase MIT1002_01584 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01584 PF00072 Response regulator receiver domain MIT1002_01585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01585 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01585 PF09308 LuxQ, periplasmic MIT1002_01585 PF00072 Response regulator receiver domain MIT1002_01587 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01587 PF00593 TonB dependent receptor MIT1002_01588 PF00860 Permease family MIT1002_01591 PF07687 Peptidase dimerisation domain MIT1002_01591 PF01546 Peptidase family M20/M25/M40 MIT1002_01592 PF00266 Aminotransferase class-V MIT1002_01593 PF01925 Sulfite exporter TauE/SafE MIT1002_01595 PF01425 Amidase MIT1002_01602 PF03881 Fructosamine kinase MIT1002_01603 PF03129 Anticodon binding domain MIT1002_01603 PF02824 TGS domain MIT1002_01603 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIT1002_01603 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MIT1002_01604 PF00707 Translation initiation factor IF-3, C-terminal domain MIT1002_01604 PF05198 Translation initiation factor IF-3, N-terminal domain MIT1002_01605 PF01632 Ribosomal protein L35 MIT1002_01606 PF00453 Ribosomal protein L20 MIT1002_01607 PF00483 Nucleotidyl transferase MIT1002_01607 PF01050 Mannose-6-phosphate isomerase MIT1002_01608 PF02397 Bacterial sugar transferase MIT1002_01611 PF18412 Outer-membrane lipoprotein Wza C-terminal domain MIT1002_01611 PF10531 SLBB domain MIT1002_01611 PF02563 Polysaccharide biosynthesis/export protein MIT1002_01612 PF13614 AAA domain MIT1002_01618 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01618 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01618 PF00563 EAL domain MIT1002_01620 PF00534 Glycosyl transferases group 1 MIT1002_01620 PF13439 Glycosyltransferase Family 4 MIT1002_01622 PF00534 Glycosyl transferases group 1 MIT1002_01622 PF13477 Glycosyl transferase 4-like MIT1002_01623 PF00535 Glycosyl transferase family 2 MIT1002_01624 PF00535 Glycosyl transferase family 2 MIT1002_01626 PF13439 Glycosyltransferase Family 4 MIT1002_01626 PF00534 Glycosyl transferases group 1 MIT1002_01627 PF04230 Polysaccharide pyruvyl transferase MIT1002_01631 PF04138 GtrA-like protein MIT1002_01632 PF00535 Glycosyl transferase family 2 MIT1002_01634 PF01757 Acyltransferase family MIT1002_01636 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MIT1002_01636 PF01409 tRNA synthetases class II core domain (F) MIT1002_01637 PF03483 B3/4 domain MIT1002_01637 PF03484 tRNA synthetase B5 domain MIT1002_01637 PF01588 Putative tRNA binding domain MIT1002_01637 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MIT1002_01637 PF03147 Ferredoxin-fold anticodon binding domain MIT1002_01638 PF00216 Bacterial DNA-binding protein MIT1002_01641 PF04073 Aminoacyl-tRNA editing domain MIT1002_01642 PF01804 Penicillin amidase MIT1002_01643 PF00933 Glycosyl hydrolase family 3 N terminal domain MIT1002_01644 PF01923 Cobalamin adenosyltransferase MIT1002_01646 PF00270 DEAD/DEAH box helicase MIT1002_01646 PF00271 Helicase conserved C-terminal domain MIT1002_01646 PF03461 TRCF domain MIT1002_01646 PF17757 UvrB interaction domain MIT1002_01646 PF02559 CarD-like/TRCF domain MIT1002_01648 PF02687 FtsX-like permease family MIT1002_01648 PF12704 MacB-like periplasmic core domain MIT1002_01652 PF03372 Endonuclease/Exonuclease/phosphatase family MIT1002_01659 PF07690 Major Facilitator Superfamily MIT1002_01661 PF00483 Nucleotidyl transferase MIT1002_01665 PF00682 HMGL-like MIT1002_01666 PF18140 Propionyl-coenzyme A carboxylase BT domain MIT1002_01666 PF00364 Biotin-requiring enzyme MIT1002_01666 PF00289 Biotin carboxylase, N-terminal domain MIT1002_01666 PF02785 Biotin carboxylase C-terminal domain MIT1002_01666 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MIT1002_01667 PF00378 Enoyl-CoA hydratase/isomerase MIT1002_01668 PF01039 Carboxyl transferase domain MIT1002_01669 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_01669 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIT1002_01669 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_01670 PF13411 MerR HTH family regulatory protein MIT1002_01671 PF02803 Thiolase, C-terminal domain MIT1002_01671 PF00108 Thiolase, N-terminal domain MIT1002_01673 PF00266 Aminotransferase class-V MIT1002_01676 PF08411 Exonuclease C-terminal MIT1002_01676 PF00929 Exonuclease MIT1002_01677 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MIT1002_01677 PF01627 Hpt domain MIT1002_01677 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01677 PF00072 Response regulator receiver domain MIT1002_01677 PF00672 HAMP domain MIT1002_01677 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01678 PF01112 Asparaginase MIT1002_01680 PF02333 Phytase MIT1002_01683 PF12833 Helix-turn-helix domain MIT1002_01683 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term MIT1002_01685 PF00270 DEAD/DEAH box helicase MIT1002_01685 PF11898 Domain of unknown function (DUF3418) MIT1002_01685 PF04408 Helicase associated domain (HA2) MIT1002_01685 PF00271 Helicase conserved C-terminal domain MIT1002_01685 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MIT1002_01688 PF17785 PUA-like domain MIT1002_01688 PF10672 S-adenosylmethionine-dependent methyltransferase MIT1002_01689 PF08659 KR domain MIT1002_01689 PF02801 Beta-ketoacyl synthase, C-terminal domain MIT1002_01689 PF16197 Ketoacyl-synthetase C-terminal extension MIT1002_01689 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_01689 PF00109 Beta-ketoacyl synthase, N-terminal domain MIT1002_01689 PF00550 Phosphopantetheine attachment site MIT1002_01689 PF00698 Acyl transferase domain MIT1002_01689 PF14765 Polyketide synthase dehydratase MIT1002_01690 PF00075 RNase H MIT1002_01691 PF00929 Exonuclease MIT1002_01697 PF12792 CSS motif domain associated with EAL MIT1002_01697 PF00563 EAL domain MIT1002_01698 PF00005 ABC transporter MIT1002_01699 PF12704 MacB-like periplasmic core domain MIT1002_01699 PF02687 FtsX-like permease family MIT1002_01702 PF00375 Sodium:dicarboxylate symporter family MIT1002_01704 PF04996 Succinylarginine dihydrolase MIT1002_01705 PF01751 Toprim domain MIT1002_01705 PF01131 DNA topoisomerase MIT1002_01705 PF01396 Topoisomerase DNA binding C4 zinc finger MIT1002_01705 PF08272 Topoisomerase I zinc-ribbon-like MIT1002_01706 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) MIT1002_01710 PF03466 LysR substrate binding domain MIT1002_01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_01711 PF12804 MobA-like NTP transferase domain MIT1002_01712 PF02634 FdhD/NarQ family MIT1002_01713 PF00384 Molybdopterin oxidoreductase MIT1002_01715 PF02798 Glutathione S-transferase, N-terminal domain MIT1002_01717 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_01717 PF03466 LysR substrate binding domain MIT1002_01718 PF13673 Acetyltransferase (GNAT) domain MIT1002_01719 PF13419 Haloacid dehalogenase-like hydrolase MIT1002_01720 PF00072 Response regulator receiver domain MIT1002_01720 PF00486 Transcriptional regulatory protein, C terminal MIT1002_01721 PF01548 Transposase MIT1002_01721 PF02371 Transposase IS116/IS110/IS902 family MIT1002_01722 PF00989 PAS fold MIT1002_01722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01722 PF18698 Histidine kinase sensor domain MIT1002_01722 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01722 PF00672 HAMP domain MIT1002_01724 PF12111 Polyribonucleotide phosphorylase C terminal MIT1002_01724 PF10150 Ribonuclease E/G family MIT1002_01724 PF00575 S1 RNA binding domain MIT1002_01725 PF01479 S4 domain MIT1002_01725 PF00849 RNA pseudouridylate synthase MIT1002_01726 PF13419 Haloacid dehalogenase-like hydrolase MIT1002_01727 PF02545 Maf-like protein MIT1002_01728 PF02620 Large ribosomal RNA subunit accumulation protein YceD MIT1002_01729 PF01783 Ribosomal L32p protein family MIT1002_01730 PF02504 Fatty acid synthesis protein MIT1002_01731 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MIT1002_01731 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MIT1002_01732 PF00698 Acyl transferase domain MIT1002_01734 PF00550 Phosphopantetheine attachment site MIT1002_01735 PF00109 Beta-ketoacyl synthase, N-terminal domain MIT1002_01735 PF02801 Beta-ketoacyl synthase, C-terminal domain MIT1002_01736 PF01063 Amino-transferase class IV MIT1002_01737 PF02618 YceG-like family MIT1002_01738 PF02223 Thymidylate kinase MIT1002_01739 PF09115 DNA polymerase III, delta subunit, C terminal MIT1002_01740 PF01026 TatD related DNase MIT1002_01741 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MIT1002_01741 PF01243 Pyridoxamine 5'-phosphate oxidase MIT1002_01742 PF13460 NAD(P)H-binding MIT1002_01743 PF08448 PAS fold MIT1002_01743 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01749 PF00561 alpha/beta hydrolase fold MIT1002_01750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MIT1002_01750 PF00378 Enoyl-CoA hydratase/isomerase MIT1002_01750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MIT1002_01751 PF00108 Thiolase, N-terminal domain MIT1002_01751 PF02803 Thiolase, C-terminal domain MIT1002_01752 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_01752 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_01752 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIT1002_01752 PF12806 Acetyl-CoA dehydrogenase C-terminal like MIT1002_01756 PF04198 Putative sugar-binding domain MIT1002_01758 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_01758 PF03466 LysR substrate binding domain MIT1002_01759 PF01575 MaoC like domain MIT1002_01761 PF00924 Mechanosensitive ion channel MIT1002_01762 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01762 PF00593 TonB dependent receptor MIT1002_01763 PF01329 Pterin 4 alpha carbinolamine dehydratase MIT1002_01767 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01767 PF01627 Hpt domain MIT1002_01767 PF00072 Response regulator receiver domain MIT1002_01767 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01768 PF00072 Response regulator receiver domain MIT1002_01769 PF02576 RimP N-terminal domain MIT1002_01769 PF17384 RimP C-terminal SH3 domain MIT1002_01770 PF13184 NusA-like KH domain MIT1002_01770 PF00575 S1 RNA binding domain MIT1002_01770 PF08529 NusA N-terminal domain MIT1002_01771 PF00009 Elongation factor Tu GTP binding domain MIT1002_01771 PF04760 Translation initiation factor IF-2, N-terminal region MIT1002_01771 PF08364 Bacterial translation initiation factor IF-2 associated region MIT1002_01771 PF11987 Translation-initiation factor 2 MIT1002_01772 PF02033 Ribosome-binding factor A MIT1002_01773 PF09157 Pseudouridine synthase II TruB, C-terminal MIT1002_01773 PF16198 tRNA pseudouridylate synthase B C-terminal domain MIT1002_01773 PF01509 TruB family pseudouridylate synthase (N terminal domain) MIT1002_01775 PF00312 Ribosomal protein S15 MIT1002_01776 PF00849 RNA pseudouridylate synthase MIT1002_01776 PF01479 S4 domain MIT1002_01778 PF00583 Acetyltransferase (GNAT) family MIT1002_01778 PF00795 Carbon-nitrogen hydrolase MIT1002_01784 PF00578 AhpC/TSA family MIT1002_01784 PF10417 C-terminal domain of 1-Cys peroxiredoxin MIT1002_01785 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_01785 PF13192 Thioredoxin domain MIT1002_01786 PF00593 TonB dependent receptor MIT1002_01786 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01793 PF11842 Domain of unknown function (DUF3362) MIT1002_01793 PF04055 Radical SAM superfamily MIT1002_01793 PF08497 Radical SAM N-terminal MIT1002_01798 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_01798 PF03466 LysR substrate binding domain MIT1002_01800 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01800 PF00593 TonB dependent receptor MIT1002_01803 PF00005 ABC transporter MIT1002_01805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIT1002_01806 PF01668 SmpB protein MIT1002_01807 PF03364 Polyketide cyclase / dehydrase and lipid transport MIT1002_01808 PF03658 RnfH family Ubiquitin MIT1002_01810 PF02028 BCCT, betaine/carnitine/choline family transporter MIT1002_01811 PF00593 TonB dependent receptor MIT1002_01811 PF07715 TonB-dependent Receptor Plug Domain MIT1002_01812 PF13181 Tetratricopeptide repeat MIT1002_01815 PF03618 Kinase/pyrophosphorylase MIT1002_01816 PF00391 PEP-utilising enzyme, mobile domain MIT1002_01816 PF02896 PEP-utilising enzyme, TIM barrel domain MIT1002_01816 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MIT1002_01819 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MIT1002_01820 PF00111 2Fe-2S iron-sulfur cluster binding domain MIT1002_01820 PF01799 [2Fe-2S] binding domain MIT1002_01824 PF08007 Cupin superfamily protein MIT1002_01825 PF00211 Adenylate and Guanylate cyclase catalytic domain MIT1002_01826 PF08328 Adenylosuccinate lyase C-terminal MIT1002_01826 PF00206 Lyase MIT1002_01827 PF04356 Protein of unknown function (DUF489) MIT1002_01829 PF00849 RNA pseudouridylate synthase MIT1002_01830 PF03971 Monomeric isocitrate dehydrogenase MIT1002_01832 PF00313 'Cold-shock' DNA-binding domain MIT1002_01833 PF02617 ATP-dependent Clp protease adaptor protein ClpS MIT1002_01834 PF10431 C-terminal, D2-small domain, of ClpB protein MIT1002_01834 PF02861 Clp amino terminal domain, pathogenicity island component MIT1002_01834 PF17871 AAA lid domain MIT1002_01834 PF07724 AAA domain (Cdc48 subfamily) MIT1002_01834 PF00004 ATPase family associated with various cellular activities (AAA) MIT1002_01835 PF01176 Translation initiation factor 1A / IF-1 MIT1002_01836 PF04377 Arginine-tRNA-protein transferase, C terminus MIT1002_01836 PF04376 Arginine-tRNA-protein transferase, N terminus MIT1002_01837 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MIT1002_01838 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_01839 PF04217 Protein of unknown function, DUF412 MIT1002_01840 PF01343 Peptidase family S49 MIT1002_01842 PF00881 Nitroreductase family MIT1002_01844 PF00710 Asparaginase, N-terminal MIT1002_01844 PF17763 Glutaminase/Asparaginase C-terminal domain MIT1002_01845 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MIT1002_01845 PF04055 Radical SAM superfamily MIT1002_01846 PF03099 Biotin/lipoate A/B protein ligase family MIT1002_01847 PF04359 Protein of unknown function (DUF493) MIT1002_01848 PF00768 D-alanyl-D-alanine carboxypeptidase MIT1002_01848 PF07943 Penicillin-binding protein 5, C-terminal domain MIT1002_01849 PF03330 Lytic transglycolase MIT1002_01849 PF05036 Sporulation related domain MIT1002_01850 PF01098 Cell cycle protein MIT1002_01851 PF03717 Penicillin-binding Protein dimerisation domain MIT1002_01851 PF00905 Penicillin binding protein transpeptidase domain MIT1002_01852 PF02590 Predicted SPOUT methyltransferase MIT1002_01854 PF01467 Cytidylyltransferase-like MIT1002_01855 PF14840 Processivity clamp loader gamma complex DNA pol III C-term MIT1002_01855 PF06144 DNA polymerase III, delta subunit MIT1002_01856 PF04390 Lipopolysaccharide-assembly MIT1002_01857 PF08264 Anticodon-binding domain of tRNA MIT1002_01857 PF00133 tRNA synthetases class I (I, L, M and V) MIT1002_01857 PF13603 Leucyl-tRNA synthetase, Domain 2 MIT1002_01859 PF13654 AAA domain MIT1002_01859 PF05362 Lon protease (S16) C-terminal proteolytic domain MIT1002_01862 PF00106 short chain dehydrogenase MIT1002_01863 PF01985 CRS1 / YhbY (CRM) domain MIT1002_01864 PF01728 FtsJ-like methyltransferase MIT1002_01865 PF00004 ATPase family associated with various cellular activities (AAA) MIT1002_01865 PF17862 AAA+ lid domain MIT1002_01865 PF06480 FtsH Extracellular MIT1002_01865 PF01434 Peptidase family M41 MIT1002_01866 PF00809 Pterin binding enzyme MIT1002_01867 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MIT1002_01867 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MIT1002_01867 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MIT1002_01867 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MIT1002_01868 PF00121 Triosephosphate isomerase MIT1002_01869 PF03840 Preprotein translocase SecG subunit MIT1002_01871 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_01871 PF00563 EAL domain MIT1002_01871 PF03707 Bacterial signalling protein N terminal repeat MIT1002_01872 PF01679 Proteolipid membrane potential modulator MIT1002_01876 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MIT1002_01876 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MIT1002_01877 PF00781 Diacylglycerol kinase catalytic domain MIT1002_01877 PF02142 MGS-like domain MIT1002_01883 PF00474 Sodium:solute symporter family MIT1002_01884 PF00696 Amino acid kinase family MIT1002_01885 PF00171 Aldehyde dehydrogenase family MIT1002_01888 PF00013 KH domain MIT1002_01888 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MIT1002_01888 PF01138 3' exoribonuclease family, domain 1 MIT1002_01888 PF03725 3' exoribonuclease family, domain 2 MIT1002_01888 PF00575 S1 RNA binding domain MIT1002_01896 PF01527 Transposase MIT1002_01915 PF03544 Gram-negative bacterial TonB protein C-terminal MIT1002_01919 PF13181 Tetratricopeptide repeat MIT1002_01919 PF07719 Tetratricopeptide repeat MIT1002_01922 PF06470 SMC proteins Flexible Hinge Domain MIT1002_01922 PF02463 RecF/RecN/SMC N terminal domain MIT1002_01923 PF04354 ZipA, C-terminal FtsZ-binding domain MIT1002_01924 PF12826 Helix-hairpin-helix motif MIT1002_01924 PF00533 BRCA1 C Terminus (BRCT) domain MIT1002_01924 PF03120 NAD-dependent DNA ligase OB-fold domain MIT1002_01924 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MIT1002_01924 PF01653 NAD-dependent DNA ligase adenylation domain MIT1002_01927 PF00664 ABC transporter transmembrane region MIT1002_01927 PF00005 ABC transporter MIT1002_01928 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MIT1002_01929 PF03966 Trm112p-like protein MIT1002_01930 PF02348 Cytidylyltransferase MIT1002_01931 PF00106 short chain dehydrogenase MIT1002_01933 PF04055 Radical SAM superfamily MIT1002_01933 PF18693 TRAM domain MIT1002_01933 PF00919 Uncharacterized protein family UPF0004 MIT1002_01936 PF00899 ThiF family MIT1002_01937 PF13409 Glutathione S-transferase, N-terminal domain MIT1002_01938 PF02678 Pirin MIT1002_01938 PF05726 Pirin C-terminal cupin domain MIT1002_01940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MIT1002_01940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MIT1002_01940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MIT1002_01940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MIT1002_01941 PF02371 Transposase IS116/IS110/IS902 family MIT1002_01941 PF01548 Transposase MIT1002_01943 PF00285 Citrate synthase, C-terminal domain MIT1002_01944 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MIT1002_01945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MIT1002_01946 PF00890 FAD binding domain MIT1002_01946 PF02910 Fumarate reductase flavoprotein C-term MIT1002_01947 PF13085 2Fe-2S iron-sulfur cluster binding domain MIT1002_01948 PF16870 2-oxoglutarate dehydrogenase C-terminal MIT1002_01948 PF02779 Transketolase, pyrimidine binding domain MIT1002_01948 PF16078 2-oxoglutarate dehydrogenase N-terminus MIT1002_01948 PF00676 Dehydrogenase E1 component MIT1002_01949 PF00364 Biotin-requiring enzyme MIT1002_01949 PF02817 e3 binding domain MIT1002_01949 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MIT1002_01950 PF08442 ATP-grasp domain MIT1002_01950 PF00549 CoA-ligase MIT1002_01951 PF02629 CoA binding domain MIT1002_01951 PF00549 CoA-ligase MIT1002_01953 PF04820 Tryptophan halogenase MIT1002_01955 PF17967 Pullulanase N2 domain MIT1002_01955 PF11852 Domain of unknown function (DUF3372) MIT1002_01955 PF18494 Pullulanase Ins domain MIT1002_01955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MIT1002_01955 PF03714 Bacterial pullanase-associated domain MIT1002_01956 PF01734 Patatin-like phospholipase MIT1002_01959 PF00128 Alpha amylase, catalytic domain MIT1002_01959 PF02903 Alpha amylase, N-terminal ig-like domain MIT1002_01959 PF16657 Maltogenic Amylase, C-terminal domain MIT1002_01960 PF00128 Alpha amylase, catalytic domain MIT1002_01960 PF10438 Cyclo-malto-dextrinase C-terminal domain MIT1002_01960 PF09087 Cyclomaltodextrinase, N-terminal MIT1002_01962 PF00128 Alpha amylase, catalytic domain MIT1002_01962 PF02806 Alpha amylase, C-terminal all-beta domain MIT1002_01962 PF00686 Starch binding domain MIT1002_01962 PF01833 IPT/TIG domain MIT1002_01963 PF00356 Bacterial regulatory proteins, lacI family MIT1002_01964 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MIT1002_01964 PF00749 tRNA synthetases class I (E and Q), catalytic domain MIT1002_01965 PF00106 short chain dehydrogenase MIT1002_01966 PF12262 Bacterial virulence factor lipase N-terminal MIT1002_01967 PF13006 Insertion element 4 transposase N-terminal MIT1002_01967 PF01609 Transposase DDE domain MIT1002_01968 PF01804 Penicillin amidase MIT1002_01969 PF01343 Peptidase family S49 MIT1002_01969 PF08496 Peptidase family S49 N-terminal MIT1002_01972 PF01784 NIF3 (NGG1p interacting factor 3) MIT1002_01974 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MIT1002_01974 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MIT1002_01975 PF00255 Glutathione peroxidase MIT1002_01976 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MIT1002_01976 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MIT1002_01978 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_01978 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_01978 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIT1002_01979 PF00378 Enoyl-CoA hydratase/isomerase MIT1002_01980 PF13847 Methyltransferase domain MIT1002_01981 PF11893 Domain of unknown function (DUF3413) MIT1002_01981 PF00884 Sulfatase MIT1002_01982 PF07208 Protein of unknown function (DUF1414) MIT1002_01983 PF04245 37-kD nucleoid-associated bacterial protein MIT1002_01985 PF01551 Peptidase family M23 MIT1002_01985 PF01464 Transglycosylase SLT domain MIT1002_01985 PF10145 Phage-related minor tail protein MIT1002_01989 PF06580 Histidine kinase MIT1002_01989 PF07694 5TMR of 5TMR-LYT MIT1002_01990 PF04397 LytTr DNA-binding domain MIT1002_01990 PF00072 Response regulator receiver domain MIT1002_01991 PF00365 Phosphofructokinase MIT1002_01993 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIT1002_01993 PF00989 PAS fold MIT1002_01993 PF01627 Hpt domain MIT1002_01993 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_01993 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_01993 PF00072 Response regulator receiver domain MIT1002_01995 PF00581 Rhodanese-like domain MIT1002_01995 PF17773 UPF0176 acylphosphatase like domain MIT1002_01999 PF00270 DEAD/DEAH box helicase MIT1002_01999 PF00271 Helicase conserved C-terminal domain MIT1002_02000 PF01144 Coenzyme A transferase MIT1002_02001 PF01144 Coenzyme A transferase MIT1002_02002 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02002 PF03466 LysR substrate binding domain MIT1002_02005 PF03466 LysR substrate binding domain MIT1002_02005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02006 PF03313 Serine dehydratase alpha chain MIT1002_02006 PF03315 Serine dehydratase beta chain MIT1002_02007 PF00293 NUDIX domain MIT1002_02008 PF00425 chorismate binding enzyme MIT1002_02008 PF04715 Anthranilate synthase component I, N terminal region MIT1002_02010 PF02646 RmuC family MIT1002_02011 PF13860 FlgD Ig-like domain MIT1002_02011 PF05922 Peptidase inhibitor I9 MIT1002_02011 PF02225 PA domain MIT1002_02011 PF00082 Subtilase family MIT1002_02012 PF00676 Dehydrogenase E1 component MIT1002_02013 PF02779 Transketolase, pyrimidine binding domain MIT1002_02013 PF02780 Transketolase, C-terminal domain MIT1002_02014 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MIT1002_02014 PF00364 Biotin-requiring enzyme MIT1002_02014 PF02817 e3 binding domain MIT1002_02015 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MIT1002_02016 PF00069 Protein kinase domain MIT1002_02018 PF00132 Bacterial transferase hexapeptide (six repeats) MIT1002_02020 PF00266 Aminotransferase class-V MIT1002_02022 PF13185 GAF domain MIT1002_02024 PF04352 ProQ/FINO family MIT1002_02024 PF17516 ProQ C-terminal domain MIT1002_02025 PF11818 C-terminal domain of tail specific protease (DUF3340) MIT1002_02025 PF00595 PDZ domain MIT1002_02025 PF03572 Peptidase family S41 MIT1002_02025 PF17804 Tail specific protease N-terminal domain MIT1002_02026 PF00209 Sodium:neurotransmitter symporter family MIT1002_02027 PF03553 Na+/H+ antiporter family MIT1002_02028 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MIT1002_02028 PF11940 Domain of unknown function (DUF3458) Ig-like fold MIT1002_02028 PF01433 Peptidase family M1 domain MIT1002_02031 PF07044 Protein of unknown function (DUF1329) MIT1002_02034 PF05088 Bacterial NAD-glutamate dehydrogenase MIT1002_02035 PF01180 Dihydroorotate dehydrogenase MIT1002_02036 PF10672 S-adenosylmethionine-dependent methyltransferase MIT1002_02036 PF02926 THUMP domain MIT1002_02036 PF01170 Putative RNA methylase family UPF0020 MIT1002_02038 PF00005 ABC transporter MIT1002_02038 PF16326 ABC transporter C-terminal domain MIT1002_02038 PF12848 ABC transporter MIT1002_02040 PF04957 Ribosome modulation factor MIT1002_02041 PF07977 FabA-like domain MIT1002_02043 PF00875 DNA photolyase MIT1002_02043 PF03441 FAD binding domain of DNA photolyase MIT1002_02044 PF00875 DNA photolyase MIT1002_02044 PF03441 FAD binding domain of DNA photolyase MIT1002_02045 PF00875 DNA photolyase MIT1002_02045 PF03441 FAD binding domain of DNA photolyase MIT1002_02046 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MIT1002_02048 PF06276 Ferric iron reductase FhuF-like transporter MIT1002_02048 PF04183 IucA / IucC family MIT1002_02049 PF01526 Tn3 transposase DDE domain MIT1002_02049 PF13700 Domain of unknown function (DUF4158) MIT1002_02054 PF00873 AcrB/AcrD/AcrF family MIT1002_02056 PF16916 Dimerisation domain of Zinc Transporter MIT1002_02056 PF01545 Cation efflux family MIT1002_02057 PF00403 Heavy-metal-associated domain MIT1002_02057 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_02057 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MIT1002_02058 PF03203 MerC mercury resistance protein MIT1002_02059 PF00403 Heavy-metal-associated domain MIT1002_02060 PF02411 MerT mercuric transport protein MIT1002_02061 PF00376 MerR family regulatory protein MIT1002_02061 PF09278 MerR, DNA binding MIT1002_02062 PF06276 Ferric iron reductase FhuF-like transporter MIT1002_02062 PF04183 IucA / IucC family MIT1002_02063 PF00501 AMP-binding enzyme MIT1002_02063 PF13193 AMP-binding enzyme C-terminal domain MIT1002_02065 PF01261 Xylose isomerase-like TIM barrel MIT1002_02070 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02070 PF16750 Sensor domain of 2-component histidine kinase MIT1002_02070 PF00672 HAMP domain MIT1002_02071 PF13333 Integrase core domain MIT1002_02071 PF00665 Integrase core domain MIT1002_02071 PF13276 HTH-like domain MIT1002_02073 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02073 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02073 PF00672 HAMP domain MIT1002_02073 PF16527 Two-component sensor protein CpxA, periplasmic domain MIT1002_02074 PF00072 Response regulator receiver domain MIT1002_02074 PF00486 Transcriptional regulatory protein, C terminal MIT1002_02079 PF02558 Ketopantoate reductase PanE/ApbA MIT1002_02079 PF08546 Ketopantoate reductase PanE/ApbA C terminal MIT1002_02086 PF06505 Activator of aromatic catabolism MIT1002_02086 PF02830 V4R domain MIT1002_02086 PF02954 Bacterial regulatory protein, Fis family MIT1002_02086 PF00158 Sigma-54 interaction domain MIT1002_02087 PF06099 Phenol hydroxylase subunit MIT1002_02088 PF02332 Methane/Phenol/Toluene Hydroxylase MIT1002_02089 PF02406 MmoB/DmpM family MIT1002_02090 PF04945 YHS domain MIT1002_02090 PF02332 Methane/Phenol/Toluene Hydroxylase MIT1002_02091 PF04663 Phenol hydroxylase conserved region MIT1002_02092 PF00111 2Fe-2S iron-sulfur cluster binding domain MIT1002_02092 PF00970 Oxidoreductase FAD-binding domain MIT1002_02092 PF00175 Oxidoreductase NAD-binding domain MIT1002_02093 PF00111 2Fe-2S iron-sulfur cluster binding domain MIT1002_02094 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIT1002_02095 PF00171 Aldehyde dehydrogenase family MIT1002_02096 PF00561 alpha/beta hydrolase fold MIT1002_02098 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation MIT1002_02098 PF01118 Semialdehyde dehydrogenase, NAD binding domain MIT1002_02099 PF00682 HMGL-like MIT1002_02099 PF07836 DmpG-like communication domain MIT1002_02101 PF01361 Tautomerase enzyme MIT1002_02102 PF00043 Glutathione S-transferase, C-terminal domain MIT1002_02102 PF02798 Glutathione S-transferase, N-terminal domain MIT1002_02103 PF01527 Transposase MIT1002_02104 PF13333 Integrase core domain MIT1002_02104 PF00665 Integrase core domain MIT1002_02104 PF13276 HTH-like domain MIT1002_02109 PF01734 Patatin-like phospholipase MIT1002_02112 PF01381 Helix-turn-helix MIT1002_02117 PF13007 Transposase C of IS166 homeodomain MIT1002_02117 PF13817 IS66 C-terminal element MIT1002_02117 PF03050 Transposase IS66 family MIT1002_02117 PF13005 zinc-finger binding domain of transposase IS66 MIT1002_02118 PF01526 Tn3 transposase DDE domain MIT1002_02118 PF13700 Domain of unknown function (DUF4158) MIT1002_02121 PF01219 Prokaryotic diacylglycerol kinase MIT1002_02122 PF00582 Universal stress protein family MIT1002_02124 PF01645 Conserved region in glutamate synthase MIT1002_02125 PF00999 Sodium/hydrogen exchanger family MIT1002_02126 PF00210 Ferritin-like domain MIT1002_02127 PF00210 Ferritin-like domain MIT1002_02129 PF00115 Cytochrome C and Quinol oxidase polypeptide I MIT1002_02132 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MIT1002_02132 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MIT1002_02134 PF00403 Heavy-metal-associated domain MIT1002_02137 PF00027 Cyclic nucleotide-binding domain MIT1002_02137 PF13545 Crp-like helix-turn-helix domain MIT1002_02138 PF00582 Universal stress protein family MIT1002_02139 PF01171 PP-loop family MIT1002_02140 PF01734 Patatin-like phospholipase MIT1002_02144 PF01810 LysE type translocator MIT1002_02145 PF02146 Sir2 family MIT1002_02146 PF00581 Rhodanese-like domain MIT1002_02147 PF08534 Redoxin MIT1002_02148 PF03942 DTW domain MIT1002_02152 PF01066 CDP-alcohol phosphatidyltransferase MIT1002_02153 PF02151 UvrB/uvrC motif MIT1002_02153 PF01541 GIY-YIG catalytic domain MIT1002_02153 PF08459 UvrC Helix-hairpin-helix N-terminal MIT1002_02154 PF00196 Bacterial regulatory proteins, luxR family MIT1002_02154 PF00072 Response regulator receiver domain MIT1002_02155 PF17954 Quercetinase C-terminal cupin domain MIT1002_02155 PF02678 Pirin MIT1002_02158 PF12867 DinB superfamily MIT1002_02158 PF03781 Sulfatase-modifying factor enzyme 1 MIT1002_02162 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MIT1002_02163 PF07681 DoxX MIT1002_02164 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02164 PF03466 LysR substrate binding domain MIT1002_02167 PF01027 Inhibitor of apoptosis-promoting Bax1 MIT1002_02168 PF02635 DsrE/DsrF-like family MIT1002_02171 PF04358 DsrC like protein MIT1002_02174 PF00593 TonB dependent receptor MIT1002_02174 PF07715 TonB-dependent Receptor Plug Domain MIT1002_02176 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIT1002_02176 PF02403 Seryl-tRNA synthetase N-terminal domain MIT1002_02177 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MIT1002_02178 PF00004 ATPase family associated with various cellular activities (AAA) MIT1002_02178 PF16193 AAA C-terminal domain MIT1002_02178 PF12002 MgsA AAA+ ATPase C terminal MIT1002_02179 PF03548 Outer membrane lipoprotein carrier protein LolA MIT1002_02180 PF09397 Ftsk gamma domain MIT1002_02180 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MIT1002_02180 PF17854 FtsK alpha domain MIT1002_02180 PF01580 FtsK/SpoIIIE family MIT1002_02181 PF01037 Lrp/AsnC ligand binding domain MIT1002_02183 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MIT1002_02183 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MIT1002_02184 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MIT1002_02185 PF18073 Rubredoxin metal binding domain MIT1002_02188 PF00216 Bacterial DNA-binding protein MIT1002_02189 PF00575 S1 RNA binding domain MIT1002_02190 PF02224 Cytidylate kinase MIT1002_02191 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MIT1002_02192 PF00266 Aminotransferase class-V MIT1002_02193 PF03989 DNA gyrase C-terminal domain, beta-propeller MIT1002_02193 PF00521 DNA gyrase/topoisomerase IV, subunit A MIT1002_02195 PF02867 Ribonucleotide reductase, barrel domain MIT1002_02195 PF00317 Ribonucleotide reductase, all-alpha domain MIT1002_02195 PF03477 ATP cone domain MIT1002_02196 PF00268 Ribonucleotide reductase, small chain MIT1002_02197 PF00111 2Fe-2S iron-sulfur cluster binding domain MIT1002_02198 PF00106 short chain dehydrogenase MIT1002_02201 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_02201 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIT1002_02202 PF00563 EAL domain MIT1002_02202 PF03707 Bacterial signalling protein N terminal repeat MIT1002_02202 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_02203 PF00072 Response regulator receiver domain MIT1002_02203 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_02204 PF00892 EamA-like transporter family MIT1002_02205 PF01259 SAICAR synthetase MIT1002_02206 PF06804 NlpB/DapX lipoprotein MIT1002_02207 PF00701 Dihydrodipicolinate synthetase family MIT1002_02209 PF00578 AhpC/TSA family MIT1002_02210 PF01594 AI-2E family transporter MIT1002_02211 PF01435 Peptidase family M48 MIT1002_02212 PF00578 AhpC/TSA family MIT1002_02213 PF03960 ArsC family MIT1002_02214 PF03358 NADPH-dependent FMN reductase MIT1002_02217 PF00308 Bacterial dnaA protein MIT1002_02219 PF00586 AIR synthase related protein, N-terminal domain MIT1002_02219 PF02769 AIR synthase related protein, C-terminal domain MIT1002_02220 PF00551 Formyl transferase MIT1002_02222 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_02222 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_02222 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIT1002_02222 PF09317 Domain of unknown function (DUF1974) MIT1002_02224 PF00072 Response regulator receiver domain MIT1002_02224 PF00196 Bacterial regulatory proteins, luxR family MIT1002_02225 PF13649 Methyltransferase domain MIT1002_02226 PF08003 Protein of unknown function (DUF1698) MIT1002_02227 PF00485 Phosphoribulokinase / Uridine kinase family MIT1002_02230 PF00128 Alpha amylase, catalytic domain MIT1002_02231 PF13419 Haloacid dehalogenase-like hydrolase MIT1002_02232 PF00994 Probable molybdopterin binding domain MIT1002_02232 PF03454 MoeA C-terminal region (domain IV) MIT1002_02232 PF03453 MoeA N-terminal region (domain I and II) MIT1002_02233 PF01554 MatE MIT1002_02237 PF00291 Pyridoxal-phosphate dependent enzyme MIT1002_02239 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MIT1002_02250 PF04134 Protein of unknown function, DUF393 MIT1002_02258 PF02567 Phenazine biosynthesis-like protein MIT1002_02260 PF00378 Enoyl-CoA hydratase/isomerase MIT1002_02263 PF00255 Glutathione peroxidase MIT1002_02264 PF02525 Flavodoxin-like fold MIT1002_02266 PF01053 Cys/Met metabolism PLP-dependent enzyme MIT1002_02269 PF00155 Aminotransferase class I and II MIT1002_02270 PF10459 Peptidase S46 MIT1002_02273 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MIT1002_02276 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIT1002_02276 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_02276 PF12806 Acetyl-CoA dehydrogenase C-terminal like MIT1002_02276 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_02277 PF12833 Helix-turn-helix domain MIT1002_02277 PF07883 Cupin domain MIT1002_02278 PF07715 TonB-dependent Receptor Plug Domain MIT1002_02278 PF00593 TonB dependent receptor MIT1002_02282 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MIT1002_02282 PF00326 Prolyl oligopeptidase family MIT1002_02283 PF00873 AcrB/AcrD/AcrF family MIT1002_02284 PF13533 Biotin-lipoyl like MIT1002_02286 PF01012 Electron transfer flavoprotein domain MIT1002_02286 PF00766 Electron transfer flavoprotein FAD-binding domain MIT1002_02287 PF01012 Electron transfer flavoprotein domain MIT1002_02289 PF00816 H-NS histone family MIT1002_02290 PF00561 alpha/beta hydrolase fold MIT1002_02292 PF00258 Flavodoxin MIT1002_02293 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_02293 PF00672 HAMP domain MIT1002_02294 PF01475 Ferric uptake regulator family MIT1002_02295 PF01063 Amino-transferase class IV MIT1002_02296 PF02626 Carboxyltransferase domain, subdomain A and B MIT1002_02297 PF02682 Carboxyltransferase domain, subdomain C and D MIT1002_02298 PF03746 LamB/YcsF family MIT1002_02299 PF13509 S1 domain MIT1002_02299 PF17783 CvfB-like winged helix domain MIT1002_02300 PF02566 OsmC-like protein MIT1002_02301 PF13533 Biotin-lipoyl like MIT1002_02302 PF00873 AcrB/AcrD/AcrF family MIT1002_02303 PF00873 AcrB/AcrD/AcrF family MIT1002_02306 PF00155 Aminotransferase class I and II MIT1002_02308 PF13286 Phosphohydrolase-associated domain MIT1002_02308 PF01966 HD domain MIT1002_02309 PF00174 Oxidoreductase molybdopterin binding domain MIT1002_02310 PF01794 Ferric reductase like transmembrane component MIT1002_02313 PF02810 SEC-C motif MIT1002_02314 PF00128 Alpha amylase, catalytic domain MIT1002_02315 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_02315 PF00107 Zinc-binding dehydrogenase MIT1002_02317 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_02317 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_02317 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIT1002_02319 PF07715 TonB-dependent Receptor Plug Domain MIT1002_02319 PF00593 TonB dependent receptor MIT1002_02323 PF06969 HemN C-terminal domain MIT1002_02323 PF04055 Radical SAM superfamily MIT1002_02324 PF03459 TOBE domain MIT1002_02324 PF00005 ABC transporter MIT1002_02325 PF00528 Binding-protein-dependent transport system inner membrane component MIT1002_02327 PF02391 MoaE protein MIT1002_02328 PF02597 ThiS family MIT1002_02329 PF01967 MoaC family MIT1002_02330 PF00994 Probable molybdopterin binding domain MIT1002_02331 PF00899 ThiF family MIT1002_02334 PF00107 Zinc-binding dehydrogenase MIT1002_02334 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_02335 PF00698 Acyl transferase domain MIT1002_02335 PF08659 KR domain MIT1002_02335 PF00550 Phosphopantetheine attachment site MIT1002_02335 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_02335 PF14765 Polyketide synthase dehydratase MIT1002_02336 PF00106 short chain dehydrogenase MIT1002_02337 PF03466 LysR substrate binding domain MIT1002_02337 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02342 PF16325 Peptidase family U32 C-terminal domain MIT1002_02342 PF01136 Peptidase family U32 MIT1002_02343 PF00037 4Fe-4S binding domain MIT1002_02344 PF00155 Aminotransferase class I and II MIT1002_02345 PF03435 Saccharopine dehydrogenase NADP binding domain MIT1002_02346 PF00155 Aminotransferase class I and II MIT1002_02349 PF01717 Cobalamin-independent synthase, Catalytic domain MIT1002_02349 PF08267 Cobalamin-independent synthase, N-terminal domain MIT1002_02350 PF07715 TonB-dependent Receptor Plug Domain MIT1002_02350 PF00593 TonB dependent receptor MIT1002_02352 PF00892 EamA-like transporter family MIT1002_02353 PF02371 Transposase IS116/IS110/IS902 family MIT1002_02353 PF01548 Transposase MIT1002_02359 PF13538 UvrD-like helicase C-terminal domain MIT1002_02360 PF00580 UvrD/REP helicase N-terminal domain MIT1002_02360 PF13361 UvrD-like helicase C-terminal domain MIT1002_02360 PF12705 PD-(D/E)XK nuclease superfamily MIT1002_02361 PF17946 RecC C-terminal domain MIT1002_02363 PF00501 AMP-binding enzyme MIT1002_02364 PF03707 Bacterial signalling protein N terminal repeat MIT1002_02364 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_02364 PF00563 EAL domain MIT1002_02365 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MIT1002_02365 PF12706 Beta-lactamase superfamily domain MIT1002_02365 PF17770 Ribonuclease J C-terminal domain MIT1002_02368 PF03466 LysR substrate binding domain MIT1002_02368 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02372 PF01022 Bacterial regulatory protein, arsR family MIT1002_02374 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02374 PF03466 LysR substrate binding domain MIT1002_02376 PF00158 Sigma-54 interaction domain MIT1002_02376 PF00072 Response regulator receiver domain MIT1002_02376 PF02954 Bacterial regulatory protein, Fis family MIT1002_02378 PF08446 PAS fold MIT1002_02378 PF00360 Phytochrome region MIT1002_02378 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02378 PF01590 GAF domain MIT1002_02379 PF00072 Response regulator receiver domain MIT1002_02380 PF09308 LuxQ, periplasmic MIT1002_02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02380 PF00072 Response regulator receiver domain MIT1002_02380 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02386 PF07043 Protein of unknown function (DUF1328) MIT1002_02390 PF07023 Protein of unknown function (DUF1315) MIT1002_02392 PF01235 Sodium:alanine symporter family MIT1002_02393 PF00246 Zinc carboxypeptidase MIT1002_02393 PF18027 Cytosolic carboxypeptidase N-terminal domain MIT1002_02394 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MIT1002_02394 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MIT1002_02396 PF01641 SelR domain MIT1002_02397 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MIT1002_02397 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MIT1002_02398 PF00128 Alpha amylase, catalytic domain MIT1002_02398 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MIT1002_02399 PF02806 Alpha amylase, C-terminal all-beta domain MIT1002_02399 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MIT1002_02399 PF00128 Alpha amylase, catalytic domain MIT1002_02400 PF02446 4-alpha-glucanotransferase MIT1002_02401 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MIT1002_02401 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MIT1002_02402 PF01263 Aldose 1-epimerase MIT1002_02403 PF01081 KDPG and KHG aldolase MIT1002_02404 PF02685 Glucokinase MIT1002_02405 PF00920 Dehydratase family MIT1002_02406 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MIT1002_02407 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MIT1002_02407 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MIT1002_02408 PF01418 Helix-turn-helix domain, rpiR family MIT1002_02408 PF01380 SIS domain MIT1002_02409 PF00224 Pyruvate kinase, barrel domain MIT1002_02409 PF02887 Pyruvate kinase, alpha/beta domain MIT1002_02414 PF04972 BON domain MIT1002_02420 PF09347 Domain of unknown function (DUF1989) MIT1002_02425 PF04962 KduI/IolB family MIT1002_02426 PF03480 Bacterial extracellular solute-binding protein, family 7 MIT1002_02427 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component MIT1002_02428 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MIT1002_02429 PF00356 Bacterial regulatory proteins, lacI family MIT1002_02430 PF08666 SAF domain MIT1002_02430 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus MIT1002_02431 PF02614 Glucuronate isomerase MIT1002_02432 PF08125 Mannitol dehydrogenase C-terminal domain MIT1002_02432 PF01232 Mannitol dehydrogenase Rossmann domain MIT1002_02433 PF01081 KDPG and KHG aldolase MIT1002_02434 PF00294 pfkB family carbohydrate kinase MIT1002_02436 PF13276 HTH-like domain MIT1002_02436 PF00665 Integrase core domain MIT1002_02436 PF13333 Integrase core domain MIT1002_02440 PF02673 Bacitracin resistance protein BacA MIT1002_02444 PF13472 GDSL-like Lipase/Acylhydrolase family MIT1002_02447 PF07470 Glycosyl Hydrolase Family 88 MIT1002_02448 PF00295 Glycosyl hydrolases family 28 MIT1002_02449 PF01095 Pectinesterase MIT1002_02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02450 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02450 PF01627 Hpt domain MIT1002_02450 PF00072 Response regulator receiver domain MIT1002_02450 PF00672 HAMP domain MIT1002_02450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MIT1002_02453 PF04231 Endonuclease I MIT1002_02454 PF11838 ERAP1-like C-terminal domain MIT1002_02454 PF01433 Peptidase family M1 domain MIT1002_02455 PF02743 Cache domain MIT1002_02455 PF00672 HAMP domain MIT1002_02455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_02458 PF03466 LysR substrate binding domain MIT1002_02458 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02459 PF01965 DJ-1/PfpI family MIT1002_02460 PF00465 Iron-containing alcohol dehydrogenase MIT1002_02461 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIT1002_02462 PF01590 GAF domain MIT1002_02462 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_02462 PF00563 EAL domain MIT1002_02462 PF00360 Phytochrome region MIT1002_02463 PF00881 Nitroreductase family MIT1002_02464 PF00199 Catalase MIT1002_02464 PF06628 Catalase-related immune-responsive MIT1002_02465 PF11849 Domain of unknown function (DUF3369) MIT1002_02466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02466 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIT1002_02466 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02468 PF00561 alpha/beta hydrolase fold MIT1002_02472 PF00561 alpha/beta hydrolase fold MIT1002_02476 PF00075 RNase H MIT1002_02482 PF02796 Helix-turn-helix domain of resolvase MIT1002_02482 PF00239 Resolvase, N terminal domain MIT1002_02487 PF12833 Helix-turn-helix domain MIT1002_02488 PF00939 Sodium:sulfate symporter transmembrane region MIT1002_02489 PF00692 dUTPase MIT1002_02490 PF10609 NUBPL iron-transfer P-loop NTPase MIT1002_02491 PF01588 Putative tRNA binding domain MIT1002_02491 PF09334 tRNA synthetases class I (M) MIT1002_02491 PF08264 Anticodon-binding domain of tRNA MIT1002_02492 PF05552 Conserved TM helix MIT1002_02492 PF00924 Mechanosensitive ion channel MIT1002_02493 PF08241 Methyltransferase domain MIT1002_02494 PF16123 Hydroxyacylglutathione hydrolase C-terminus MIT1002_02494 PF00753 Metallo-beta-lactamase superfamily MIT1002_02495 PF01476 LysM domain MIT1002_02495 PF01464 Transglycosylase SLT domain MIT1002_02499 PF04958 Arginine N-succinyltransferase beta subunit MIT1002_02500 PF01406 tRNA synthetases class I (C) catalytic domain MIT1002_02500 PF09190 DALR domain MIT1002_02501 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MIT1002_02502 PF00149 Calcineurin-like phosphoesterase MIT1002_02504 PF15975 Flotillin MIT1002_02504 PF01145 SPFH domain / Band 7 family MIT1002_02507 PF00128 Alpha amylase, catalytic domain MIT1002_02508 PF01638 HxlR-like helix-turn-helix MIT1002_02509 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_02509 PF00107 Zinc-binding dehydrogenase MIT1002_02513 PF00199 Catalase MIT1002_02513 PF18011 C-terminal domain found in long catalases MIT1002_02513 PF06628 Catalase-related immune-responsive MIT1002_02514 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_02514 PF00107 Zinc-binding dehydrogenase MIT1002_02515 PF03466 LysR substrate binding domain MIT1002_02515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02520 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MIT1002_02524 PF00156 Phosphoribosyl transferase domain MIT1002_02525 PF02674 Colicin V production protein MIT1002_02526 PF05036 Sporulation related domain MIT1002_02527 PF08245 Mur ligase middle domain MIT1002_02527 PF02875 Mur ligase family, glutamate ligase domain MIT1002_02528 PF01039 Carboxyl transferase domain MIT1002_02528 PF17848 Acetyl-coA carboxylase zinc finger domain MIT1002_02529 PF01416 tRNA pseudouridine synthase MIT1002_02531 PF01118 Semialdehyde dehydrogenase, NAD binding domain MIT1002_02531 PF02774 Semialdehyde dehydrogenase, dimerisation domain MIT1002_02532 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MIT1002_02532 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MIT1002_02532 PF11890 Domain of unknown function (DUF3410) MIT1002_02533 PF00596 Class II Aldolase and Adducin N-terminal domain MIT1002_02536 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MIT1002_02538 PF00109 Beta-ketoacyl synthase, N-terminal domain MIT1002_02538 PF02801 Beta-ketoacyl synthase, C-terminal domain MIT1002_02539 PF00501 AMP-binding enzyme MIT1002_02539 PF13193 AMP-binding enzyme C-terminal domain MIT1002_02540 PF00501 AMP-binding enzyme MIT1002_02540 PF13193 AMP-binding enzyme C-terminal domain MIT1002_02542 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MIT1002_02542 PF01266 FAD dependent oxidoreductase MIT1002_02550 PF00005 ABC transporter MIT1002_02552 PF07683 Cobalamin synthesis protein cobW C-terminal domain MIT1002_02552 PF02492 CobW/HypB/UreG, nucleotide-binding domain MIT1002_02553 PF02311 AraC-like ligand binding domain MIT1002_02553 PF12833 Helix-turn-helix domain MIT1002_02554 PF00857 Isochorismatase family MIT1002_02556 PF02667 Short chain fatty acid transporter MIT1002_02557 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02557 PF01627 Hpt domain MIT1002_02557 PF00072 Response regulator receiver domain MIT1002_02557 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MIT1002_02557 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02557 PF00672 HAMP domain MIT1002_02558 PF00675 Insulinase (Peptidase family M16) MIT1002_02558 PF05193 Peptidase M16 inactive domain MIT1002_02561 PF04315 Elongation factor P hydroxylase MIT1002_02566 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_02566 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIT1002_02567 PF00378 Enoyl-CoA hydratase/isomerase MIT1002_02568 PF00440 Bacterial regulatory proteins, tetR family MIT1002_02568 PF02909 Tetracyclin repressor-like, C-terminal domain MIT1002_02569 PF00732 GMC oxidoreductase MIT1002_02569 PF05199 GMC oxidoreductase MIT1002_02571 PF06974 Protein of unknown function (DUF1298) MIT1002_02571 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain MIT1002_02572 PF00440 Bacterial regulatory proteins, tetR family MIT1002_02572 PF08361 MAATS-type transcriptional repressor, C-terminal region MIT1002_02573 PF04286 Protein of unknown function (DUF445) MIT1002_02578 PF00326 Prolyl oligopeptidase family MIT1002_02578 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MIT1002_02579 PF00392 Bacterial regulatory proteins, gntR family MIT1002_02579 PF07840 FadR C-terminal domain MIT1002_02580 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MIT1002_02581 PF02600 Disulfide bond formation protein DsbB MIT1002_02582 PF13302 Acetyltransferase (GNAT) domain MIT1002_02583 PF03692 Putative zinc- or iron-chelating domain MIT1002_02584 PF01557 Fumarylacetoacetate (FAA) hydrolase family MIT1002_02586 PF05166 YcgL domain MIT1002_02587 PF01612 3'-5' exonuclease MIT1002_02587 PF00570 HRDC domain MIT1002_02588 PF00501 AMP-binding enzyme MIT1002_02588 PF13193 AMP-binding enzyme C-terminal domain MIT1002_02589 PF12697 Alpha/beta hydrolase family MIT1002_02592 PF00814 Glycoprotease family MIT1002_02593 PF06733 DEAD_2 MIT1002_02593 PF13307 Helicase C-terminal domain MIT1002_02595 PF05231 MASE1 MIT1002_02595 PF00563 EAL domain MIT1002_02604 PF14338 Mrr N-terminal domain MIT1002_02604 PF04471 Restriction endonuclease MIT1002_02620 PF00753 Metallo-beta-lactamase superfamily MIT1002_02620 PF16123 Hydroxyacylglutathione hydrolase C-terminus MIT1002_02623 PF00128 Alpha amylase, catalytic domain MIT1002_02632 PF01634 ATP phosphoribosyltransferase MIT1002_02632 PF08029 HisG, C-terminal domain MIT1002_02633 PF00815 Histidinol dehydrogenase MIT1002_02634 PF00155 Aminotransferase class I and II MIT1002_02635 PF00475 Imidazoleglycerol-phosphate dehydratase MIT1002_02636 PF00117 Glutamine amidotransferase class-I MIT1002_02637 PF00977 Histidine biosynthesis protein MIT1002_02638 PF00977 Histidine biosynthesis protein MIT1002_02639 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MIT1002_02639 PF01502 Phosphoribosyl-AMP cyclohydrolase MIT1002_02641 PF01226 Formate/nitrite transporter MIT1002_02642 PF00675 Insulinase (Peptidase family M16) MIT1002_02642 PF05193 Peptidase M16 inactive domain MIT1002_02643 PF10502 Signal peptidase, peptidase S26 MIT1002_02644 PF07715 TonB-dependent Receptor Plug Domain MIT1002_02644 PF00593 TonB dependent receptor MIT1002_02647 PF05191 Adenylate kinase, active site lid MIT1002_02648 PF00183 Hsp90 protein MIT1002_02648 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02649 PF02132 RecR protein MIT1002_02649 PF13662 Toprim domain MIT1002_02652 PF00970 Oxidoreductase FAD-binding domain MIT1002_02652 PF00175 Oxidoreductase NAD-binding domain MIT1002_02653 PF02575 YbaB/EbfC DNA-binding family MIT1002_02654 PF12169 DNA polymerase III subunits gamma and tau domain III MIT1002_02654 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MIT1002_02654 PF12170 DNA polymerase III tau subunit V interacting with alpha MIT1002_02655 PF00156 Phosphoribosyl transferase domain MIT1002_02658 PF05114 Protein of unknown function (DUF692) MIT1002_02668 PF01066 CDP-alcohol phosphatidyltransferase MIT1002_02672 PF09330 D-lactate dehydrogenase, membrane binding MIT1002_02672 PF01565 FAD binding domain MIT1002_02673 PF02652 L-lactate permease MIT1002_02674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02674 PF03466 LysR substrate binding domain MIT1002_02677 PF07724 AAA domain (Cdc48 subfamily) MIT1002_02677 PF10431 C-terminal, D2-small domain, of ClpB protein MIT1002_02677 PF17871 AAA lid domain MIT1002_02677 PF00004 ATPase family associated with various cellular activities (AAA) MIT1002_02677 PF02861 Clp amino terminal domain, pathogenicity island component MIT1002_02678 PF02578 Multi-copper polyphenol oxidoreductase laccase MIT1002_02679 PF00849 RNA pseudouridylate synthase MIT1002_02679 PF01479 S4 domain MIT1002_02680 PF13525 Outer membrane lipoprotein MIT1002_02682 PF04545 Sigma-70, region 4 MIT1002_02682 PF04542 Sigma-70 region 2 MIT1002_02685 PF00106 short chain dehydrogenase MIT1002_02689 PF00691 OmpA family MIT1002_02689 PF13677 Membrane MotB of proton-channel complex MotA/MotB MIT1002_02690 PF01618 MotA/TolQ/ExbB proton channel family MIT1002_02691 PF02609 Exonuclease VII small subunit MIT1002_02692 PF00348 Polyprenyl synthetase MIT1002_02693 PF02780 Transketolase, C-terminal domain MIT1002_02693 PF02779 Transketolase, pyrimidine binding domain MIT1002_02693 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MIT1002_02694 PF04608 Phosphatidylglycerophosphatase A MIT1002_02695 PF02769 AIR synthase related protein, C-terminal domain MIT1002_02695 PF00586 AIR synthase related protein, N-terminal domain MIT1002_02696 PF01029 NusB family MIT1002_02697 PF00885 6,7-dimethyl-8-ribityllumazine synthase MIT1002_02698 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MIT1002_02698 PF00925 GTP cyclohydrolase II MIT1002_02699 PF00677 Lumazine binding domain MIT1002_02700 PF01872 RibD C-terminal domain MIT1002_02700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MIT1002_02701 PF03477 ATP cone domain MIT1002_02702 PF00464 Serine hydroxymethyltransferase MIT1002_02703 PF00132 Bacterial transferase hexapeptide (six repeats) MIT1002_02703 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MIT1002_02704 PF00005 ABC transporter MIT1002_02704 PF12848 ABC transporter MIT1002_02706 PF18073 Rubredoxin metal binding domain MIT1002_02708 PF18429 Domain of unknown function (DUF5609) MIT1002_02710 PF01026 TatD related DNase MIT1002_02711 PF01243 Pyridoxamine 5'-phosphate oxidase MIT1002_02711 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MIT1002_02712 PF01926 50S ribosome-binding GTPase MIT1002_02712 PF07650 KH domain MIT1002_02713 PF14622 Ribonuclease-III-like MIT1002_02713 PF00035 Double-stranded RNA binding motif MIT1002_02714 PF10502 Signal peptidase, peptidase S26 MIT1002_02715 PF06421 GTP-binding protein LepA C-terminus MIT1002_02715 PF00679 Elongation factor G C-terminus MIT1002_02715 PF03144 Elongation factor Tu domain 2 MIT1002_02715 PF00009 Elongation factor Tu GTP binding domain MIT1002_02717 PF03888 MucB/RseB N-terminal domain MIT1002_02717 PF17188 MucB/RseB C-terminal domain MIT1002_02719 PF04542 Sigma-70 region 2 MIT1002_02719 PF08281 Sigma-70, region 4 MIT1002_02720 PF00890 FAD binding domain MIT1002_02720 PF02910 Fumarate reductase flavoprotein C-term MIT1002_02723 PF03937 Flavinator of succinate dehydrogenase MIT1002_02725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIT1002_02726 PF00543 Nitrogen regulatory protein P-II MIT1002_02727 PF02540 NAD synthase MIT1002_02734 PF07963 Prokaryotic N-terminal methylation motif MIT1002_02734 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor MIT1002_02739 PF02401 LytB protein MIT1002_02740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIT1002_02741 PF01252 Signal peptidase (SPase) II MIT1002_02742 PF00133 tRNA synthetases class I (I, L, M and V) MIT1002_02742 PF06827 Zinc finger found in FPG and IleRS MIT1002_02742 PF08264 Anticodon-binding domain of tRNA MIT1002_02743 PF06574 FAD synthetase MIT1002_02743 PF01687 Riboflavin kinase MIT1002_02744 PF03023 Lipid II flippase MurJ MIT1002_02745 PF01649 Ribosomal protein S20 MIT1002_02746 PF00106 short chain dehydrogenase MIT1002_02749 PF01758 Sodium Bile acid symporter family MIT1002_02750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02750 PF03466 LysR substrate binding domain MIT1002_02753 PF07687 Peptidase dimerisation domain MIT1002_02753 PF01546 Peptidase family M20/M25/M40 MIT1002_02755 PF13145 PPIC-type PPIASE domain MIT1002_02756 PF00216 Bacterial DNA-binding protein MIT1002_02757 PF02190 ATP-dependent protease La (LON) substrate-binding domain MIT1002_02757 PF00004 ATPase family associated with various cellular activities (AAA) MIT1002_02757 PF05362 Lon protease (S16) C-terminal proteolytic domain MIT1002_02758 PF02371 Transposase IS116/IS110/IS902 family MIT1002_02758 PF01548 Transposase MIT1002_02759 PF10431 C-terminal, D2-small domain, of ClpB protein MIT1002_02759 PF07724 AAA domain (Cdc48 subfamily) MIT1002_02759 PF06689 ClpX C4-type zinc finger MIT1002_02760 PF00574 Clp protease MIT1002_02761 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIT1002_02761 PF05698 Bacterial trigger factor protein (TF) C-terminus MIT1002_02761 PF05697 Bacterial trigger factor protein (TF) MIT1002_02770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MIT1002_02770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MIT1002_02772 PF01980 tRNA-methyltransferase O MIT1002_02772 PF18389 TrmO C-terminal domain MIT1002_02773 PF03129 Anticodon binding domain MIT1002_02773 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MIT1002_02774 PF00753 Metallo-beta-lactamase superfamily MIT1002_02774 PF12706 Beta-lactamase superfamily domain MIT1002_02775 PF02253 Phospholipase A1 MIT1002_02776 PF00850 Histone deacetylase domain MIT1002_02777 PF00672 HAMP domain MIT1002_02777 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_02778 PF00117 Glutamine amidotransferase class-I MIT1002_02778 PF00958 GMP synthase C terminal domain MIT1002_02778 PF02540 NAD synthase MIT1002_02779 PF00571 CBS domain MIT1002_02779 PF00478 IMP dehydrogenase / GMP reductase domain MIT1002_02780 PF02601 Exonuclease VII, large subunit MIT1002_02780 PF13742 OB-fold nucleic acid binding domain MIT1002_02784 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MIT1002_02784 PF01926 50S ribosome-binding GTPase MIT1002_02785 PF13360 PQQ-like domain MIT1002_02786 PF09976 Tetratricopeptide repeat-like domain MIT1002_02787 PF03129 Anticodon binding domain MIT1002_02787 PF13393 Histidyl-tRNA synthetase MIT1002_02788 PF04551 GcpE protein MIT1002_02789 PF13464 Domain of unknown function (DUF4115) MIT1002_02791 PF04055 Radical SAM superfamily MIT1002_02792 PF01609 Transposase DDE domain MIT1002_02792 PF13006 Insertion element 4 transposase N-terminal MIT1002_02793 PF00334 Nucleoside diphosphate kinase MIT1002_02794 PF02657 Fe-S metabolism associated domain MIT1002_02795 PF01883 Iron-sulfur cluster assembly protein MIT1002_02796 PF01521 Iron-sulphur cluster biosynthesis MIT1002_02797 PF00266 Aminotransferase class-V MIT1002_02798 PF01458 Uncharacterized protein family (UPF0051) MIT1002_02799 PF00005 ABC transporter MIT1002_02800 PF01458 Uncharacterized protein family (UPF0051) MIT1002_02801 PF00266 Aminotransferase class-V MIT1002_02802 PF02082 Transcriptional regulator MIT1002_02804 PF00743 Flavin-binding monooxygenase-like MIT1002_02805 PF00132 Bacterial transferase hexapeptide (six repeats) MIT1002_02805 PF06426 Serine acetyltransferase, N-terminal MIT1002_02806 PF00588 SpoU rRNA Methylase family MIT1002_02807 PF00459 Inositol monophosphatase family MIT1002_02809 PF00072 Response regulator receiver domain MIT1002_02809 PF04397 LytTr DNA-binding domain MIT1002_02810 PF02355 Protein export membrane protein MIT1002_02810 PF07549 SecD/SecF GG Motif MIT1002_02811 PF02355 Protein export membrane protein MIT1002_02811 PF13721 SecD export protein N-terminal TM region MIT1002_02811 PF07549 SecD/SecF GG Motif MIT1002_02812 PF02699 Preprotein translocase subunit MIT1002_02813 PF01702 Queuine tRNA-ribosyltransferase MIT1002_02814 PF02547 Queuosine biosynthesis protein MIT1002_02817 PF04012 PspA/IM30 family MIT1002_02818 PF07885 Ion channel MIT1002_02821 PF06693 Protein of unknown function (DUF1190) MIT1002_02822 PF03738 Glutathionylspermidine synthase preATP-grasp MIT1002_02825 PF00005 ABC transporter MIT1002_02828 PF04960 Glutaminase MIT1002_02829 PF00245 Alkaline phosphatase MIT1002_02830 PF00072 Response regulator receiver domain MIT1002_02831 PF00463 Isocitrate lyase family MIT1002_02832 PF03466 LysR substrate binding domain MIT1002_02832 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02833 PF01274 Malate synthase MIT1002_02835 PF01370 NAD dependent epimerase/dehydratase family MIT1002_02840 PF17820 PDZ domain MIT1002_02840 PF13180 PDZ domain MIT1002_02846 PF14602 Hexapeptide repeat of succinyl-transferase MIT1002_02846 PF00132 Bacterial transferase hexapeptide (six repeats) MIT1002_02846 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal MIT1002_02851 PF13439 Glycosyltransferase Family 4 MIT1002_02851 PF00534 Glycosyl transferases group 1 MIT1002_02854 PF13537 Glutamine amidotransferase domain MIT1002_02854 PF00733 Asparagine synthase MIT1002_02857 PF04230 Polysaccharide pyruvyl transferase MIT1002_02859 PF01943 Polysaccharide biosynthesis protein MIT1002_02859 PF14667 Polysaccharide biosynthesis C-terminal domain MIT1002_02868 PF00534 Glycosyl transferases group 1 MIT1002_02868 PF13439 Glycosyltransferase Family 4 MIT1002_02870 PF01522 Polysaccharide deacetylase MIT1002_02871 PF02397 Bacterial sugar transferase MIT1002_02874 PF13614 AAA domain MIT1002_02876 PF01471 Putative peptidoglycan binding domain MIT1002_02876 PF13401 AAA domain MIT1002_02877 PF01541 GIY-YIG catalytic domain MIT1002_02879 PF03710 Glutamate-ammonia ligase adenylyltransferase MIT1002_02879 PF08335 GlnD PII-uridylyltransferase MIT1002_02881 PF03279 Bacterial lipid A biosynthesis acyltransferase MIT1002_02885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_02885 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_02885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MIT1002_02885 PF09317 Domain of unknown function (DUF1974) MIT1002_02888 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_02888 PF00563 EAL domain MIT1002_02888 PF03707 Bacterial signalling protein N terminal repeat MIT1002_02889 PF00265 Thymidine kinase MIT1002_02891 PF04820 Tryptophan halogenase MIT1002_02892 PF00356 Bacterial regulatory proteins, lacI family MIT1002_02897 PF10566 Glycoside hydrolase 97 MIT1002_02897 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation MIT1002_02897 PF14508 Glycosyl-hydrolase 97 N-terminal MIT1002_02898 PF01926 50S ribosome-binding GTPase MIT1002_02899 PF00588 SpoU rRNA Methylase family MIT1002_02899 PF08032 RNA 2'-O ribose methyltransferase substrate binding MIT1002_02902 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain MIT1002_02902 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MIT1002_02902 PF01276 Orn/Lys/Arg decarboxylase, major domain MIT1002_02908 PF00171 Aldehyde dehydrogenase family MIT1002_02909 PF00732 GMC oxidoreductase MIT1002_02909 PF05199 GMC oxidoreductase MIT1002_02912 PF05971 RNA methyltransferase MIT1002_02913 PF00376 MerR family regulatory protein MIT1002_02913 PF09278 MerR, DNA binding MIT1002_02919 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MIT1002_02919 PF02770 Acyl-CoA dehydrogenase, middle domain MIT1002_02919 PF18158 Adaptive response protein AidB N-terminal domain MIT1002_02925 PF03965 Penicillinase repressor MIT1002_02929 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIT1002_02931 PF01799 [2Fe-2S] binding domain MIT1002_02931 PF00111 2Fe-2S iron-sulfur cluster binding domain MIT1002_02932 PF00941 FAD binding domain in molybdopterin dehydrogenase MIT1002_02932 PF03450 CO dehydrogenase flavoprotein C-terminal domain MIT1002_02933 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MIT1002_02933 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MIT1002_02934 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MIT1002_02935 PF00528 Binding-protein-dependent transport system inner membrane component MIT1002_02936 PF00528 Binding-protein-dependent transport system inner membrane component MIT1002_02936 PF12911 N-terminal TM domain of oligopeptide transport permease C MIT1002_02937 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MIT1002_02937 PF00005 ABC transporter MIT1002_02939 PF00106 short chain dehydrogenase MIT1002_02940 PF01965 DJ-1/PfpI family MIT1002_02941 PF03631 Virulence factor BrkB MIT1002_02942 PF07690 Major Facilitator Superfamily MIT1002_02946 PF00962 Adenosine/AMP deaminase MIT1002_02949 PF07152 YaeQ protein MIT1002_02955 PF07690 Major Facilitator Superfamily MIT1002_02957 PF06827 Zinc finger found in FPG and IleRS MIT1002_02957 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MIT1002_02957 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MIT1002_02960 PF16124 RecQ zinc-binding MIT1002_02960 PF00271 Helicase conserved C-terminal domain MIT1002_02960 PF00270 DEAD/DEAH box helicase MIT1002_02960 PF09382 RQC domain MIT1002_02960 PF00570 HRDC domain MIT1002_02963 PF01627 Hpt domain MIT1002_02963 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02963 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02963 PF00072 Response regulator receiver domain MIT1002_02963 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MIT1002_02963 PF00672 HAMP domain MIT1002_02965 PF08446 PAS fold MIT1002_02965 PF00360 Phytochrome region MIT1002_02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02965 PF01590 GAF domain MIT1002_02965 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02966 PF07995 Glucose / Sorbosone dehydrogenase MIT1002_02971 PF02347 Glycine cleavage system P-protein MIT1002_02972 PF01597 Glycine cleavage H-protein MIT1002_02973 PF08669 Glycine cleavage T-protein C-terminal barrel domain MIT1002_02973 PF01571 Aminomethyltransferase folate-binding domain MIT1002_02974 PF03466 LysR substrate binding domain MIT1002_02974 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_02976 PF13276 HTH-like domain MIT1002_02976 PF00665 Integrase core domain MIT1002_02976 PF13333 Integrase core domain MIT1002_02979 PF00557 Metallopeptidase family M24 MIT1002_02979 PF01321 Creatinase/Prolidase N-terminal domain MIT1002_02982 PF01494 FAD binding domain MIT1002_02983 PF01494 FAD binding domain MIT1002_02984 PF00557 Metallopeptidase family M24 MIT1002_02984 PF05195 Aminopeptidase P, N-terminal domain MIT1002_02985 PF03695 Uncharacterised protein family (UPF0149) MIT1002_02988 PF00294 pfkB family carbohydrate kinase MIT1002_02989 PF01156 Inosine-uridine preferring nucleoside hydrolase MIT1002_02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_02990 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_02991 PF01812 5-formyltetrahydrofolate cyclo-ligase family MIT1002_02992 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MIT1002_02993 PF01842 ACT domain MIT1002_02993 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MIT1002_02993 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MIT1002_02998 PF00873 AcrB/AcrD/AcrF family MIT1002_02999 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIT1002_03000 PF03466 LysR substrate binding domain MIT1002_03000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_03001 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MIT1002_03001 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_03002 PF02817 e3 binding domain MIT1002_03002 PF00364 Biotin-requiring enzyme MIT1002_03002 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MIT1002_03003 PF17831 Pyruvate dehydrogenase E1 component middle domain MIT1002_03003 PF00456 Transketolase, thiamine diphosphate binding domain MIT1002_03004 PF00392 Bacterial regulatory proteins, gntR family MIT1002_03004 PF07729 FCD domain MIT1002_03006 PF01510 N-acetylmuramoyl-L-alanine amidase MIT1002_03008 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MIT1002_03008 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MIT1002_03009 PF07963 Prokaryotic N-terminal methylation motif MIT1002_03010 PF00482 Type II secretion system (T2SS), protein F MIT1002_03011 PF01478 Type IV leader peptidase family MIT1002_03011 PF06750 Bacterial Peptidase A24 N-terminal domain MIT1002_03012 PF01121 Dephospho-CoA kinase MIT1002_03013 PF07072 Cell division protein MIT1002_03014 PF03884 DNA gyrase inhibitor YacG MIT1002_03015 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MIT1002_03016 PF00293 NUDIX domain MIT1002_03017 PF01043 SecA preprotein cross-linking domain MIT1002_03017 PF02810 SEC-C motif MIT1002_03017 PF07517 SecA DEAD-like domain MIT1002_03017 PF07516 SecA Wing and Scaffold domain MIT1002_03018 PF01476 LysM domain MIT1002_03018 PF08525 Opacity-associated protein A N-terminal motif MIT1002_03018 PF01551 Peptidase family M23 MIT1002_03019 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MIT1002_03020 PF12327 FtsZ family, C-terminal domain MIT1002_03020 PF00091 Tubulin/FtsZ family, GTPase domain MIT1002_03021 PF02491 SHS2 domain inserted in FTSA MIT1002_03022 PF03799 Cell division protein FtsQ MIT1002_03022 PF08478 POTRA domain, FtsQ-type MIT1002_03023 PF07478 D-ala D-ala ligase C-terminus MIT1002_03023 PF01820 D-ala D-ala ligase N-terminus MIT1002_03024 PF08245 Mur ligase middle domain MIT1002_03024 PF01225 Mur ligase family, catalytic domain MIT1002_03024 PF02875 Mur ligase family, glutamate ligase domain MIT1002_03025 PF04101 Glycosyltransferase family 28 C-terminal domain MIT1002_03025 PF03033 Glycosyltransferase family 28 N-terminal domain MIT1002_03026 PF01098 Cell cycle protein MIT1002_03027 PF02875 Mur ligase family, glutamate ligase domain MIT1002_03027 PF08245 Mur ligase middle domain MIT1002_03028 PF00953 Glycosyl transferase family 4 MIT1002_03028 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MIT1002_03029 PF02875 Mur ligase family, glutamate ligase domain MIT1002_03029 PF01225 Mur ligase family, catalytic domain MIT1002_03029 PF08245 Mur ligase middle domain MIT1002_03030 PF08245 Mur ligase middle domain MIT1002_03030 PF02875 Mur ligase family, glutamate ligase domain MIT1002_03030 PF01225 Mur ligase family, catalytic domain MIT1002_03031 PF03717 Penicillin-binding Protein dimerisation domain MIT1002_03031 PF00905 Penicillin binding protein transpeptidase domain MIT1002_03032 PF04999 Cell division protein FtsL MIT1002_03033 PF01795 MraW methylase family MIT1002_03034 PF02381 MraZ protein, putative antitoxin-like MIT1002_03038 PF00873 AcrB/AcrD/AcrF family MIT1002_03039 PF00529 HlyD membrane-fusion protein of T1SS MIT1002_03039 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MIT1002_03043 PF00462 Glutaredoxin MIT1002_03043 PF08534 Redoxin MIT1002_03044 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MIT1002_03046 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_03048 PF00072 Response regulator receiver domain MIT1002_03048 PF00158 Sigma-54 interaction domain MIT1002_03048 PF02954 Bacterial regulatory protein, Fis family MIT1002_03049 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03049 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03049 PF09456 RcsC Alpha-Beta-Loop (ABL) MIT1002_03049 PF00072 Response regulator receiver domain MIT1002_03050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MIT1002_03050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MIT1002_03053 PF05552 Conserved TM helix MIT1002_03053 PF00924 Mechanosensitive ion channel MIT1002_03054 PF04452 RNA methyltransferase MIT1002_03055 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MIT1002_03055 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MIT1002_03056 PF02622 Uncharacterized ACR, COG1678 MIT1002_03057 PF03652 Holliday junction resolvase MIT1002_03059 PF00437 Type II/IV secretion system protein MIT1002_03060 PF00437 Type II/IV secretion system protein MIT1002_03061 PF01168 Alanine racemase, N-terminal domain MIT1002_03062 PF14748 Pyrroline-5-carboxylate reductase dimerisation MIT1002_03062 PF03807 NADP oxidoreductase coenzyme F420-dependent MIT1002_03063 PF02325 YGGT family MIT1002_03065 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_03065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIT1002_03069 PF00080 Copper/zinc superoxide dismutase (SODC) MIT1002_03070 PF02566 OsmC-like protein MIT1002_03071 PF01625 Peptide methionine sulfoxide reductase MIT1002_03073 PF03591 AzlC protein MIT1002_03075 PF07690 Major Facilitator Superfamily MIT1002_03076 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MIT1002_03077 PF03883 Peroxide stress protein YaaA MIT1002_03080 PF00923 Transaldolase/Fructose-6-phosphate aldolase MIT1002_03081 PF00342 Phosphoglucose isomerase MIT1002_03083 PF03167 Uracil DNA glycosylase superfamily MIT1002_03084 PF00291 Pyridoxal-phosphate dependent enzyme MIT1002_03084 PF14821 Threonine synthase N terminus MIT1002_03085 PF08544 GHMP kinases C terminal MIT1002_03085 PF00288 GHMP kinases N terminal domain MIT1002_03086 PF03447 Homoserine dehydrogenase, NAD binding domain MIT1002_03086 PF01842 ACT domain MIT1002_03086 PF13840 ACT domain MIT1002_03086 PF00696 Amino acid kinase family MIT1002_03086 PF00742 Homoserine dehydrogenase MIT1002_03087 PF17755 UvrA DNA-binding domain MIT1002_03088 PF03466 LysR substrate binding domain MIT1002_03088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_03089 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_03089 PF00107 Zinc-binding dehydrogenase MIT1002_03091 PF01022 Bacterial regulatory protein, arsR family MIT1002_03093 PF03358 NADPH-dependent FMN reductase MIT1002_03094 PF01758 Sodium Bile acid symporter family MIT1002_03095 PF00072 Response regulator receiver domain MIT1002_03095 PF01339 CheB methylesterase MIT1002_03096 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MIT1002_03097 PF00486 Transcriptional regulatory protein, C terminal MIT1002_03097 PF00072 Response regulator receiver domain MIT1002_03098 PF08521 Two-component sensor kinase N-terminal MIT1002_03098 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03098 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03102 PF00291 Pyridoxal-phosphate dependent enzyme MIT1002_03104 PF04116 Fatty acid hydroxylase superfamily MIT1002_03107 PF01548 Transposase MIT1002_03107 PF02371 Transposase IS116/IS110/IS902 family MIT1002_03109 PF03435 Saccharopine dehydrogenase NADP binding domain MIT1002_03109 PF16653 Saccharopine dehydrogenase C-terminal domain MIT1002_03110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MIT1002_03111 PF00535 Glycosyl transferase family 2 MIT1002_03113 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MIT1002_03114 PF04348 LppC putative lipoprotein MIT1002_03115 PF02021 Uncharacterised protein family UPF0102 MIT1002_03116 PF00534 Glycosyl transferases group 1 MIT1002_03117 PF13580 SIS domain MIT1002_03118 PF04972 BON domain MIT1002_03119 PF07690 Major Facilitator Superfamily MIT1002_03121 PF00893 Small Multidrug Resistance protein MIT1002_03122 PF07730 Histidine kinase MIT1002_03123 PF00196 Bacterial regulatory proteins, luxR family MIT1002_03123 PF00072 Response regulator receiver domain MIT1002_03126 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03126 PF00593 TonB dependent receptor MIT1002_03130 PF00285 Citrate synthase, C-terminal domain MIT1002_03131 PF00330 Aconitase family (aconitate hydratase) MIT1002_03131 PF00694 Aconitase C-terminal domain MIT1002_03132 PF04303 PrpF protein MIT1002_03133 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_03134 PF00474 Sodium:solute symporter family MIT1002_03137 PF00072 Response regulator receiver domain MIT1002_03137 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03137 PF01627 Hpt domain MIT1002_03137 PF18415 Histidine kinase receptor ArcB trans-membrane domain MIT1002_03137 PF00989 PAS fold MIT1002_03137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03138 PF01510 N-acetylmuramoyl-L-alanine amidase MIT1002_03139 PF01493 GXGXG motif MIT1002_03139 PF01645 Conserved region in glutamate synthase MIT1002_03139 PF04898 Glutamate synthase central domain MIT1002_03139 PF00310 Glutamine amidotransferases class-II MIT1002_03140 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_03140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MIT1002_03143 PF01048 Phosphorylase superfamily MIT1002_03144 PF03186 CobD/Cbib protein MIT1002_03145 PF01497 Periplasmic binding protein MIT1002_03146 PF00581 Rhodanese-like domain MIT1002_03149 PF01266 FAD dependent oxidoreductase MIT1002_03150 PF07237 Protein of unknown function (DUF1428) MIT1002_03151 PF00579 tRNA synthetases class I (W and Y) MIT1002_03152 PF01551 Peptidase family M23 MIT1002_03152 PF01464 Transglycosylase SLT domain MIT1002_03152 PF10145 Phage-related minor tail protein MIT1002_03153 PF03702 Anhydro-N-acetylmuramic acid kinase MIT1002_03154 PF03600 Citrate transporter MIT1002_03155 PF07690 Major Facilitator Superfamily MIT1002_03157 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MIT1002_03159 PF01053 Cys/Met metabolism PLP-dependent enzyme MIT1002_03160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MIT1002_03161 PF00043 Glutathione S-transferase, C-terminal domain MIT1002_03161 PF13417 Glutathione S-transferase, N-terminal domain MIT1002_03162 PF01521 Iron-sulphur cluster biosynthesis MIT1002_03163 PF03976 Polyphosphate kinase 2 (PPK2) MIT1002_03164 PF03776 Septum formation topological specificity factor MinE MIT1002_03165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MIT1002_03166 PF05209 Septum formation inhibitor MinC, N-terminal domain MIT1002_03166 PF03775 Septum formation inhibitor MinC, C-terminal domain MIT1002_03167 PF10415 Fumarase C C-terminus MIT1002_03167 PF00206 Lyase MIT1002_03169 PF00127 Copper binding proteins, plastocyanin/azurin family MIT1002_03173 PF03653 Uncharacterised protein family (UPF0093) MIT1002_03176 PF01566 Natural resistance-associated macrophage protein MIT1002_03179 PF00155 Aminotransferase class I and II MIT1002_03180 PF00072 Response regulator receiver domain MIT1002_03180 PF00486 Transcriptional regulatory protein, C terminal MIT1002_03181 PF00679 Elongation factor G C-terminus MIT1002_03181 PF00009 Elongation factor Tu GTP binding domain MIT1002_03181 PF03144 Elongation factor Tu domain 2 MIT1002_03183 PF00120 Glutamine synthetase, catalytic domain MIT1002_03183 PF03951 Glutamine synthetase, beta-Grasp domain MIT1002_03185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03185 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03185 PF00989 PAS fold MIT1002_03186 PF00158 Sigma-54 interaction domain MIT1002_03186 PF02954 Bacterial regulatory protein, Fis family MIT1002_03186 PF00072 Response regulator receiver domain MIT1002_03187 PF00072 Response regulator receiver domain MIT1002_03188 PF01553 Acyltransferase MIT1002_03189 PF06877 Regulator of ribonuclease activity B MIT1002_03194 PF00672 HAMP domain MIT1002_03194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03194 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03194 PF01627 Hpt domain MIT1002_03194 PF00072 Response regulator receiver domain MIT1002_03194 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MIT1002_03195 PF00133 tRNA synthetases class I (I, L, M and V) MIT1002_03195 PF08264 Anticodon-binding domain of tRNA MIT1002_03195 PF10458 Valyl tRNA synthetase tRNA binding arm MIT1002_03196 PF04364 DNA polymerase III chi subunit, HolC MIT1002_03197 PF00883 Cytosol aminopeptidase family, catalytic domain MIT1002_03197 PF02789 Cytosol aminopeptidase family, N-terminal domain MIT1002_03198 PF03739 Lipopolysaccharide export system permease LptF/LptG MIT1002_03199 PF03739 Lipopolysaccharide export system permease LptF/LptG MIT1002_03202 PF04545 Sigma-70, region 4 MIT1002_03202 PF04542 Sigma-70 region 2 MIT1002_03210 PF12008 Type I restriction and modification enzyme - subunit R C terminal MIT1002_03210 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MIT1002_03210 PF18766 SWI2/SNF2 ATPase MIT1002_03212 PF12161 HsdM N-terminal domain MIT1002_03212 PF02384 N-6 DNA Methylase MIT1002_03217 PF01693 Caulimovirus viroplasmin MIT1002_03221 PF00589 Phage integrase family MIT1002_03221 PF02899 Phage integrase, N-terminal SAM-like domain MIT1002_03226 PF06114 IrrE N-terminal-like domain MIT1002_03231 PF05717 IS66 Orf2 like protein MIT1002_03233 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MIT1002_03236 PF03773 Predicted permease MIT1002_03241 PF13340 Putative transposase of IS4/5 family (DUF4096) MIT1002_03242 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MIT1002_03242 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MIT1002_03243 PF01272 Transcription elongation factor, GreA/GreB, C-term MIT1002_03243 PF14760 Rnk N-terminus MIT1002_03244 PF00970 Oxidoreductase FAD-binding domain MIT1002_03244 PF00042 Globin MIT1002_03244 PF00175 Oxidoreductase NAD-binding domain MIT1002_03245 PF01590 GAF domain MIT1002_03245 PF00158 Sigma-54 interaction domain MIT1002_03250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MIT1002_03250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MIT1002_03251 PF01594 AI-2E family transporter MIT1002_03252 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03252 PF00593 TonB dependent receptor MIT1002_03255 PF08240 Alcohol dehydrogenase GroES-like domain MIT1002_03255 PF00107 Zinc-binding dehydrogenase MIT1002_03256 PF13098 Thioredoxin-like domain MIT1002_03257 PF00578 AhpC/TSA family MIT1002_03258 PF00072 Response regulator receiver domain MIT1002_03258 PF00486 Transcriptional regulatory protein, C terminal MIT1002_03259 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03259 PF08521 Two-component sensor kinase N-terminal MIT1002_03264 PF00230 Major intrinsic protein MIT1002_03265 PF00892 EamA-like transporter family MIT1002_03268 PF02659 Putative manganese efflux pump MIT1002_03270 PF00753 Metallo-beta-lactamase superfamily MIT1002_03270 PF10996 Beta-Casp domain MIT1002_03270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MIT1002_03271 PF02690 Na+/Pi-cotransporter MIT1002_03272 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MIT1002_03273 PF01321 Creatinase/Prolidase N-terminal domain MIT1002_03273 PF00557 Metallopeptidase family M24 MIT1002_03274 PF05221 S-adenosyl-L-homocysteine hydrolase MIT1002_03274 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MIT1002_03275 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_03277 PF03547 Membrane transport protein MIT1002_03278 PF13360 PQQ-like domain MIT1002_03278 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MIT1002_03279 PF01011 PQQ enzyme repeat MIT1002_03279 PF13360 PQQ-like domain MIT1002_03283 PF00005 ABC transporter MIT1002_03285 PF00883 Cytosol aminopeptidase family, catalytic domain MIT1002_03285 PF02789 Cytosol aminopeptidase family, N-terminal domain MIT1002_03286 PF12706 Beta-lactamase superfamily domain MIT1002_03287 PF03070 TENA/THI-4/PQQC family MIT1002_03288 PF05402 Coenzyme PQQ synthesis protein D (PqqD) MIT1002_03289 PF04055 Radical SAM superfamily MIT1002_03289 PF13186 Iron-sulfur cluster-binding domain MIT1002_03292 PF13472 GDSL-like Lipase/Acylhydrolase family MIT1002_03294 PF03883 Peroxide stress protein YaaA MIT1002_03295 PF08448 PAS fold MIT1002_03295 PF13188 PAS domain MIT1002_03295 PF00072 Response regulator receiver domain MIT1002_03295 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03297 PF01070 FMN-dependent dehydrogenase MIT1002_03298 PF01261 Xylose isomerase-like TIM barrel MIT1002_03299 PF00596 Class II Aldolase and Adducin N-terminal domain MIT1002_03300 PF00455 DeoR C terminal sensor domain MIT1002_03300 PF08220 DeoR-like helix-turn-helix domain MIT1002_03302 PF00294 pfkB family carbohydrate kinase MIT1002_03303 PF09339 IclR helix-turn-helix domain MIT1002_03303 PF01614 Bacterial transcriptional regulator MIT1002_03305 PF14583 Oligogalacturonate lyase MIT1002_03307 PF07470 Glycosyl Hydrolase Family 88 MIT1002_03310 PF05336 L-rhamnose mutarotase MIT1002_03315 PF13007 Transposase C of IS166 homeodomain MIT1002_03315 PF03050 Transposase IS66 family MIT1002_03315 PF13817 IS66 C-terminal element MIT1002_03315 PF13005 zinc-finger binding domain of transposase IS66 MIT1002_03317 PF00196 Bacterial regulatory proteins, luxR family MIT1002_03317 PF00072 Response regulator receiver domain MIT1002_03318 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03320 PF12801 4Fe-4S binding domain MIT1002_03320 PF04205 FMN-binding domain MIT1002_03321 PF00171 Aldehyde dehydrogenase family MIT1002_03322 PF00196 Bacterial regulatory proteins, luxR family MIT1002_03322 PF00072 Response regulator receiver domain MIT1002_03323 PF05231 MASE1 MIT1002_03323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03323 PF07730 Histidine kinase MIT1002_03324 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_03324 PF08447 PAS fold MIT1002_03324 PF13426 PAS domain MIT1002_03326 PF00171 Aldehyde dehydrogenase family MIT1002_03327 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MIT1002_03327 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MIT1002_03328 PF02028 BCCT, betaine/carnitine/choline family transporter MIT1002_03329 PF03466 LysR substrate binding domain MIT1002_03329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_03330 PF01070 FMN-dependent dehydrogenase MIT1002_03331 PF09330 D-lactate dehydrogenase, membrane binding MIT1002_03331 PF01565 FAD binding domain MIT1002_03332 PF00196 Bacterial regulatory proteins, luxR family MIT1002_03333 PF03783 Curli production assembly/transport component CsgG MIT1002_03338 PF00082 Subtilase family MIT1002_03339 PF00072 Response regulator receiver domain MIT1002_03339 PF00196 Bacterial regulatory proteins, luxR family MIT1002_03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03340 PF07730 Histidine kinase MIT1002_03342 PF00270 DEAD/DEAH box helicase MIT1002_03342 PF00271 Helicase conserved C-terminal domain MIT1002_03343 PF00924 Mechanosensitive ion channel MIT1002_03343 PF12795 Mechanosensitive ion channel porin domain MIT1002_03343 PF12794 Mechanosensitive ion channel inner membrane domain 1 MIT1002_03345 PF00141 Peroxidase MIT1002_03347 PF00672 HAMP domain MIT1002_03347 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_03347 PF02203 Tar ligand binding domain homologue MIT1002_03350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_03350 PF03466 LysR substrate binding domain MIT1002_03352 PF01925 Sulfite exporter TauE/SafE MIT1002_03353 PF00155 Aminotransferase class I and II MIT1002_03354 PF08769 Sporulation initiation factor Spo0A C terminal MIT1002_03354 PF00072 Response regulator receiver domain MIT1002_03356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03356 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03358 PF00136 DNA polymerase family B MIT1002_03358 PF03104 DNA polymerase family B, exonuclease domain MIT1002_03360 PF00501 AMP-binding enzyme MIT1002_03360 PF13193 AMP-binding enzyme C-terminal domain MIT1002_03370 PF05958 tRNA (Uracil-5-)-methyltransferase MIT1002_03371 PF00440 Bacterial regulatory proteins, tetR family MIT1002_03373 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MIT1002_03373 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_03375 PF03167 Uracil DNA glycosylase superfamily MIT1002_03376 PF00563 EAL domain MIT1002_03376 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_03376 PF03707 Bacterial signalling protein N terminal repeat MIT1002_03378 PF01507 Phosphoadenosine phosphosulfate reductase family MIT1002_03379 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MIT1002_03379 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MIT1002_03380 PF00667 FAD binding domain MIT1002_03380 PF00258 Flavodoxin MIT1002_03380 PF00175 Oxidoreductase NAD-binding domain MIT1002_03384 PF04024 PspC domain MIT1002_03385 PF04012 PspA/IM30 family MIT1002_03387 PF01207 Dihydrouridine synthase (Dus) MIT1002_03388 PF00589 Phage integrase family MIT1002_03388 PF02899 Phage integrase, N-terminal SAM-like domain MIT1002_03393 PF01420 Type I restriction modification DNA specificity domain MIT1002_03394 PF02384 N-6 DNA Methylase MIT1002_03395 PF08463 EcoEI R protein C-terminal MIT1002_03395 PF00271 Helicase conserved C-terminal domain MIT1002_03395 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MIT1002_03395 PF04851 Type III restriction enzyme, res subunit MIT1002_03403 PF01695 IstB-like ATP binding protein MIT1002_03404 PF00665 Integrase core domain MIT1002_03413 PF00691 OmpA family MIT1002_03413 PF01389 OmpA-like transmembrane domain MIT1002_03414 PF02190 ATP-dependent protease La (LON) substrate-binding domain MIT1002_03414 PF05362 Lon protease (S16) C-terminal proteolytic domain MIT1002_03414 PF00004 ATPase family associated with various cellular activities (AAA) MIT1002_03415 PF03707 Bacterial signalling protein N terminal repeat MIT1002_03415 PF00563 EAL domain MIT1002_03415 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_03418 PF01609 Transposase DDE domain MIT1002_03418 PF13006 Insertion element 4 transposase N-terminal MIT1002_03419 PF00756 Putative esterase MIT1002_03420 PF01553 Acyltransferase MIT1002_03421 PF01553 Acyltransferase MIT1002_03422 PF00924 Mechanosensitive ion channel MIT1002_03425 PF01370 NAD dependent epimerase/dehydratase family MIT1002_03426 PF00209 Sodium:neurotransmitter symporter family MIT1002_03429 PF01625 Peptide methionine sulfoxide reductase MIT1002_03432 PF00258 Flavodoxin MIT1002_03434 PF02472 Biopolymer transport protein ExbD/TolR MIT1002_03436 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) MIT1002_03436 PF13181 Tetratricopeptide repeat MIT1002_03437 PF01270 Glycosyl hydrolases family 8 MIT1002_03439 PF03170 Bacterial cellulose synthase subunit MIT1002_03439 PF00535 Glycosyl transferase family 2 MIT1002_03439 PF07238 PilZ domain MIT1002_03439 PF03552 Cellulose synthase MIT1002_03442 PF05175 Methyltransferase small domain MIT1002_03443 PF13460 NAD(P)H-binding MIT1002_03444 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region MIT1002_03444 PF00326 Prolyl oligopeptidase family MIT1002_03445 PF08000 Bacterial PH domain MIT1002_03446 PF00563 EAL domain MIT1002_03446 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_03446 PF08448 PAS fold MIT1002_03447 PF00291 Pyridoxal-phosphate dependent enzyme MIT1002_03448 PF07969 Amidohydrolase family MIT1002_03450 PF00753 Metallo-beta-lactamase superfamily MIT1002_03452 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_03452 PF03466 LysR substrate binding domain MIT1002_03456 PF05360 yiaA/B two helix domain MIT1002_03460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin MIT1002_03461 PF00593 TonB dependent receptor MIT1002_03461 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03462 PF00171 Aldehyde dehydrogenase family MIT1002_03463 PF01613 Flavin reductase like domain MIT1002_03464 PF00881 Nitroreductase family MIT1002_03465 PF00561 alpha/beta hydrolase fold MIT1002_03466 PF01042 Endoribonuclease L-PSP MIT1002_03467 PF00857 Isochorismatase family MIT1002_03468 PF00296 Luciferase-like monooxygenase MIT1002_03469 PF08362 YcdC-like protein, C-terminal region MIT1002_03469 PF00440 Bacterial regulatory proteins, tetR family MIT1002_03472 PF09905 DNA-binding protein VF530 MIT1002_03473 PF02447 GntP family permease MIT1002_03475 PF00356 Bacterial regulatory proteins, lacI family MIT1002_03476 PF16123 Hydroxyacylglutathione hydrolase C-terminus MIT1002_03476 PF00753 Metallo-beta-lactamase superfamily MIT1002_03478 PF00817 impB/mucB/samB family MIT1002_03478 PF11798 IMS family HHH motif MIT1002_03478 PF11799 impB/mucB/samB family C-terminal domain MIT1002_03479 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MIT1002_03482 PF02424 ApbE family MIT1002_03483 PF00175 Oxidoreductase NAD-binding domain MIT1002_03483 PF00970 Oxidoreductase FAD-binding domain MIT1002_03483 PF00111 2Fe-2S iron-sulfur cluster binding domain MIT1002_03484 PF02508 Rnf-Nqr subunit, membrane protein MIT1002_03485 PF02508 Rnf-Nqr subunit, membrane protein MIT1002_03486 PF04205 FMN-binding domain MIT1002_03487 PF03116 NQR2, RnfD, RnfE family MIT1002_03488 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MIT1002_03488 PF11973 NQRA C-terminal domain MIT1002_03489 PF07055 Enoyl reductase FAD binding domain MIT1002_03489 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MIT1002_03489 PF12241 Trans-2-enoyl-CoA reductase catalytic region MIT1002_03490 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MIT1002_03490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIT1002_03491 PF00311 Phosphoenolpyruvate carboxylase MIT1002_03492 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MIT1002_03492 PF00056 lactate/malate dehydrogenase, NAD binding domain MIT1002_03493 PF02863 Arginine repressor, C-terminal domain MIT1002_03493 PF01316 Arginine repressor, DNA binding domain MIT1002_03495 PF00593 TonB dependent receptor MIT1002_03498 PF00485 Phosphoribulokinase / Uridine kinase family MIT1002_03499 PF07662 Na+ dependent nucleoside transporter C-terminus MIT1002_03499 PF01773 Na+ dependent nucleoside transporter N-terminus MIT1002_03499 PF07670 Nucleoside recognition MIT1002_03502 PF02469 Fasciclin domain MIT1002_03504 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_03504 PF00072 Response regulator receiver domain MIT1002_03506 PF00571 CBS domain MIT1002_03506 PF01380 SIS domain MIT1002_03507 PF00474 Sodium:solute symporter family MIT1002_03509 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03509 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03509 PF00072 Response regulator receiver domain MIT1002_03509 PF09456 RcsC Alpha-Beta-Loop (ABL) MIT1002_03511 PF08443 RimK-like ATP-grasp domain MIT1002_03511 PF18030 RimK PreATP-grasp domain MIT1002_03513 PF08443 RimK-like ATP-grasp domain MIT1002_03513 PF18030 RimK PreATP-grasp domain MIT1002_03515 PF00196 Bacterial regulatory proteins, luxR family MIT1002_03515 PF00072 Response regulator receiver domain MIT1002_03516 PF13193 AMP-binding enzyme C-terminal domain MIT1002_03516 PF16177 Acetyl-coenzyme A synthetase N-terminus MIT1002_03516 PF00501 AMP-binding enzyme MIT1002_03518 PF02690 Na+/Pi-cotransporter MIT1002_03519 PF00248 Aldo/keto reductase family MIT1002_03521 PF00082 Subtilase family MIT1002_03524 PF00069 Protein kinase domain MIT1002_03525 PF07730 Histidine kinase MIT1002_03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03526 PF00196 Bacterial regulatory proteins, luxR family MIT1002_03526 PF00072 Response regulator receiver domain MIT1002_03527 PF00082 Subtilase family MIT1002_03530 PF06628 Catalase-related immune-responsive MIT1002_03530 PF00199 Catalase MIT1002_03533 PF03144 Elongation factor Tu domain 2 MIT1002_03533 PF00009 Elongation factor Tu GTP binding domain MIT1002_03533 PF03143 Elongation factor Tu C-terminal domain MIT1002_03538 PF03309 Type III pantothenate kinase MIT1002_03539 PF03099 Biotin/lipoate A/B protein ligase family MIT1002_03539 PF02237 Biotin protein ligase C terminal domain MIT1002_03539 PF08279 HTH domain MIT1002_03540 PF01565 FAD binding domain MIT1002_03540 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MIT1002_03541 PF00672 HAMP domain MIT1002_03541 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_03541 PF12729 Four helix bundle sensory module for signal transduction MIT1002_03552 PF00664 ABC transporter transmembrane region MIT1002_03552 PF03412 Peptidase C39 family MIT1002_03552 PF00005 ABC transporter MIT1002_03553 PF03466 LysR substrate binding domain MIT1002_03553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_03556 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MIT1002_03556 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MIT1002_03556 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MIT1002_03557 PF16363 GDP-mannose 4,6 dehydratase MIT1002_03558 PF04321 RmlD substrate binding domain MIT1002_03559 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MIT1002_03560 PF00483 Nucleotidyl transferase MIT1002_03561 PF00535 Glycosyl transferase family 2 MIT1002_03561 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 MIT1002_03567 PF00535 Glycosyl transferase family 2 MIT1002_03577 PF00884 Sulfatase MIT1002_03577 PF16385 Domain of unknown function MIT1002_03580 PF00535 Glycosyl transferase family 2 MIT1002_03581 PF01050 Mannose-6-phosphate isomerase MIT1002_03581 PF00483 Nucleotidyl transferase MIT1002_03582 PF00700 Bacterial flagellin C-terminal helical region MIT1002_03582 PF07196 Flagellin hook IN motif MIT1002_03582 PF00669 Bacterial flagellin N-terminal helical region MIT1002_03584 PF01196 Ribosomal protein L17 MIT1002_03585 PF01000 RNA polymerase Rpb3/RpoA insert domain MIT1002_03585 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MIT1002_03585 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MIT1002_03586 PF00163 Ribosomal protein S4/S9 N-terminal domain MIT1002_03586 PF01479 S4 domain MIT1002_03587 PF00411 Ribosomal protein S11 MIT1002_03588 PF00416 Ribosomal protein S13/S18 MIT1002_03590 PF00444 Ribosomal protein L36 MIT1002_03591 PF00344 SecY translocase MIT1002_03592 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MIT1002_03593 PF00327 Ribosomal protein L30p/L7e MIT1002_03594 PF03719 Ribosomal protein S5, C-terminal domain MIT1002_03594 PF00333 Ribosomal protein S5, N-terminal domain MIT1002_03595 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MIT1002_03596 PF00347 Ribosomal protein L6 MIT1002_03597 PF00410 Ribosomal protein S8 MIT1002_03598 PF00253 Ribosomal protein S14p/S29e MIT1002_03599 PF00281 Ribosomal protein L5 MIT1002_03599 PF00673 ribosomal L5P family C-terminus MIT1002_03600 PF00467 KOW motif MIT1002_03600 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MIT1002_03601 PF00238 Ribosomal protein L14p/L23e MIT1002_03602 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03602 PF09308 LuxQ, periplasmic MIT1002_03602 PF00072 Response regulator receiver domain MIT1002_03602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03604 PF00082 Subtilase family MIT1002_03604 PF05922 Peptidase inhibitor I9 MIT1002_03605 PF00588 SpoU rRNA Methylase family MIT1002_03605 PF08032 RNA 2'-O ribose methyltransferase substrate binding MIT1002_03606 PF17876 Cold shock domain MIT1002_03606 PF08461 Ribonuclease R winged-helix domain MIT1002_03606 PF08206 Ribonuclease B OB domain MIT1002_03606 PF00773 RNB domain MIT1002_03606 PF00575 S1 RNA binding domain MIT1002_03607 PF09423 PhoD-like phosphatase MIT1002_03607 PF16655 PhoD-like phosphatase, N-terminal domain MIT1002_03610 PF00593 TonB dependent receptor MIT1002_03610 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03613 PF08238 Sel1 repeat MIT1002_03615 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MIT1002_03616 PF00175 Oxidoreductase NAD-binding domain MIT1002_03617 PF04389 Peptidase family M28 MIT1002_03619 PF01590 GAF domain MIT1002_03619 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03619 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03619 PF08446 PAS fold MIT1002_03619 PF00360 Phytochrome region MIT1002_03621 PF01654 Cytochrome bd terminal oxidase subunit I MIT1002_03622 PF02322 Cytochrome bd terminal oxidase subunit II MIT1002_03624 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_03624 PF00672 HAMP domain MIT1002_03624 PF12729 Four helix bundle sensory module for signal transduction MIT1002_03625 PF01037 Lrp/AsnC ligand binding domain MIT1002_03625 PF13404 AsnC-type helix-turn-helix domain MIT1002_03628 PF00313 'Cold-shock' DNA-binding domain MIT1002_03629 PF03109 ABC1 family MIT1002_03631 PF01209 ubiE/COQ5 methyltransferase family MIT1002_03633 PF01432 Peptidase family M3 MIT1002_03634 PF00072 Response regulator receiver domain MIT1002_03636 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03636 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03636 PF08448 PAS fold MIT1002_03636 PF13188 PAS domain MIT1002_03636 PF00072 Response regulator receiver domain MIT1002_03637 PF00158 Sigma-54 interaction domain MIT1002_03637 PF00072 Response regulator receiver domain MIT1002_03637 PF02954 Bacterial regulatory protein, Fis family MIT1002_03638 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_03638 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MIT1002_03639 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MIT1002_03639 PF00384 Molybdopterin oxidoreductase MIT1002_03639 PF01568 Molydopterin dinucleotide binding domain MIT1002_03640 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03640 PF00593 TonB dependent receptor MIT1002_03642 PF07676 WD40-like Beta Propeller Repeat MIT1002_03642 PF00326 Prolyl oligopeptidase family MIT1002_03653 PF00005 ABC transporter MIT1002_03653 PF03412 Peptidase C39 family MIT1002_03653 PF00664 ABC transporter transmembrane region MIT1002_03654 PF00196 Bacterial regulatory proteins, luxR family MIT1002_03654 PF00072 Response regulator receiver domain MIT1002_03659 PF07724 AAA domain (Cdc48 subfamily) MIT1002_03659 PF00004 ATPase family associated with various cellular activities (AAA) MIT1002_03660 PF00227 Proteasome subunit MIT1002_03661 PF00313 'Cold-shock' DNA-binding domain MIT1002_03664 PF05036 Sporulation related domain MIT1002_03665 PF18074 Primosomal protein N C-terminal domain MIT1002_03665 PF17764 3′ DNA-binding domain (3′BD) MIT1002_03665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MIT1002_03665 PF00271 Helicase conserved C-terminal domain MIT1002_03665 PF00270 DEAD/DEAH box helicase MIT1002_03666 PF01197 Ribosomal protein L31 MIT1002_03668 PF03949 Malic enzyme, NAD binding domain MIT1002_03668 PF00390 Malic enzyme, N-terminal domain MIT1002_03669 PF01340 Met Apo-repressor, MetJ MIT1002_03670 PF02219 Methylenetetrahydrofolate reductase MIT1002_03671 PF03631 Virulence factor BrkB MIT1002_03674 PF00561 alpha/beta hydrolase fold MIT1002_03675 PF02580 D-Tyr-tRNA(Tyr) deacylase MIT1002_03676 PF00583 Acetyltransferase (GNAT) family MIT1002_03676 PF09500 Putative thioesterase (yiiD_Cterm) MIT1002_03677 PF00140 Sigma-70 factor, region 1.2 MIT1002_03677 PF04542 Sigma-70 region 2 MIT1002_03677 PF04545 Sigma-70, region 4 MIT1002_03678 PF00563 EAL domain MIT1002_03678 PF08668 HDOD domain MIT1002_03679 PF00563 EAL domain MIT1002_03679 PF08668 HDOD domain MIT1002_03680 PF18075 FtsX extracellular domain MIT1002_03681 PF00005 ABC transporter MIT1002_03682 PF00448 SRP54-type protein, GTPase domain MIT1002_03682 PF02881 SRP54-type protein, helical bundle domain MIT1002_03685 PF01914 MarC family integral membrane protein MIT1002_03688 PF12404 Peptidase MIT1002_03688 PF00883 Cytosol aminopeptidase family, catalytic domain MIT1002_03689 PF03749 Sugar fermentation stimulation protein RE domain MIT1002_03689 PF17746 SfsA N-terminal OB domain MIT1002_03690 PF01258 Prokaryotic dksA/traR C4-type zinc finger MIT1002_03691 PF00749 tRNA synthetases class I (E and Q), catalytic domain MIT1002_03692 PF12627 Probable RNA and SrmB- binding site of polymerase A MIT1002_03692 PF01743 Poly A polymerase head domain MIT1002_03692 PF12626 Polymerase A arginine-rich C-terminus MIT1002_03693 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MIT1002_03694 PF02548 Ketopantoate hydroxymethyltransferase MIT1002_03695 PF02569 Pantoate-beta-alanine ligase MIT1002_03696 PF00282 Pyridoxal-dependent decarboxylase conserved domain MIT1002_03699 PF01061 ABC-2 type transporter MIT1002_03700 PF00005 ABC transporter MIT1002_03701 PF00072 Response regulator receiver domain MIT1002_03701 PF00486 Transcriptional regulatory protein, C terminal MIT1002_03702 PF00672 HAMP domain MIT1002_03702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03702 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03706 PF00571 CBS domain MIT1002_03706 PF01595 Cyclin M transmembrane N-terminal domain MIT1002_03707 PF03773 Predicted permease MIT1002_03708 PF13722 5TM C-terminal transporter carbon starvation CstA MIT1002_03708 PF02554 Carbon starvation protein CstA MIT1002_03709 PF00175 Oxidoreductase NAD-binding domain MIT1002_03709 PF00258 Flavodoxin MIT1002_03709 PF00667 FAD binding domain MIT1002_03718 PF02472 Biopolymer transport protein ExbD/TolR MIT1002_03720 PF01618 MotA/TolQ/ExbB proton channel family MIT1002_03722 PF00593 TonB dependent receptor MIT1002_03722 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03723 PF01070 FMN-dependent dehydrogenase MIT1002_03724 PF18331 PKHD-type hydroxylase C-terminal domain MIT1002_03724 PF13640 2OG-Fe(II) oxygenase superfamily MIT1002_03725 PF00593 TonB dependent receptor MIT1002_03725 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03726 PF07859 alpha/beta hydrolase fold MIT1002_03728 PF03144 Elongation factor Tu domain 2 MIT1002_03728 PF00009 Elongation factor Tu GTP binding domain MIT1002_03728 PF03143 Elongation factor Tu C-terminal domain MIT1002_03729 PF14492 Elongation Factor G, domain II MIT1002_03729 PF00679 Elongation factor G C-terminus MIT1002_03729 PF03144 Elongation factor Tu domain 2 MIT1002_03729 PF03764 Elongation factor G, domain IV MIT1002_03729 PF00009 Elongation factor Tu GTP binding domain MIT1002_03730 PF00177 Ribosomal protein S7p/S5e MIT1002_03731 PF00164 Ribosomal protein S12/S23 MIT1002_03732 PF04997 RNA polymerase Rpb1, domain 1 MIT1002_03732 PF00623 RNA polymerase Rpb1, domain 2 MIT1002_03732 PF04983 RNA polymerase Rpb1, domain 3 MIT1002_03732 PF05000 RNA polymerase Rpb1, domain 4 MIT1002_03732 PF04998 RNA polymerase Rpb1, domain 5 MIT1002_03733 PF04565 RNA polymerase Rpb2, domain 3 MIT1002_03733 PF04560 RNA polymerase Rpb2, domain 7 MIT1002_03733 PF00562 RNA polymerase Rpb2, domain 6 MIT1002_03733 PF04563 RNA polymerase beta subunit MIT1002_03733 PF04561 RNA polymerase Rpb2, domain 2 MIT1002_03733 PF10385 RNA polymerase beta subunit external 1 domain MIT1002_03734 PF00542 Ribosomal protein L7/L12 C-terminal domain MIT1002_03734 PF16320 Ribosomal protein L7/L12 dimerisation domain MIT1002_03735 PF00466 Ribosomal protein L10 MIT1002_03736 PF00687 Ribosomal protein L1p/L10e family MIT1002_03737 PF00298 Ribosomal protein L11, RNA binding domain MIT1002_03737 PF03946 Ribosomal protein L11, N-terminal domain MIT1002_03740 PF00467 KOW motif MIT1002_03740 PF02357 Transcription termination factor nusG MIT1002_03741 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MIT1002_03743 PF00664 ABC transporter transmembrane region MIT1002_03743 PF00005 ABC transporter MIT1002_03744 PF03737 Aldolase/RraA MIT1002_03745 PF01431 Peptidase family M13 MIT1002_03745 PF05649 Peptidase family M13 MIT1002_03748 PF00270 DEAD/DEAH box helicase MIT1002_03748 PF00271 Helicase conserved C-terminal domain MIT1002_03748 PF03880 DbpA RNA binding domain MIT1002_03750 PF01979 Amidohydrolase family MIT1002_03751 PF08212 Lipocalin-like domain MIT1002_03752 PF00248 Aldo/keto reductase family MIT1002_03753 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MIT1002_03754 PF00924 Mechanosensitive ion channel MIT1002_03754 PF05552 Conserved TM helix MIT1002_03755 PF07690 Major Facilitator Superfamily MIT1002_03756 PF00128 Alpha amylase, catalytic domain MIT1002_03758 PF01227 GTP cyclohydrolase I MIT1002_03760 PF04371 Porphyromonas-type peptidyl-arginine deiminase MIT1002_03761 PF00795 Carbon-nitrogen hydrolase MIT1002_03764 PF00270 DEAD/DEAH box helicase MIT1002_03764 PF08494 DEAD/H associated MIT1002_03764 PF00271 Helicase conserved C-terminal domain MIT1002_03765 PF04235 Protein of unknown function (DUF418) MIT1002_03768 PF04675 DNA ligase N terminus MIT1002_03768 PF01068 ATP dependent DNA ligase domain MIT1002_03768 PF04679 ATP dependent DNA ligase C terminal region MIT1002_03769 PF08207 Elongation factor P (EF-P) KOW-like domain MIT1002_03769 PF01132 Elongation factor P (EF-P) OB domain MIT1002_03769 PF09285 Elongation factor P, C-terminal MIT1002_03770 PF00294 pfkB family carbohydrate kinase MIT1002_03773 PF00043 Glutathione S-transferase, C-terminal domain MIT1002_03773 PF02798 Glutathione S-transferase, N-terminal domain MIT1002_03774 PF02798 Glutathione S-transferase, N-terminal domain MIT1002_03776 PF00561 alpha/beta hydrolase fold MIT1002_03779 PF00171 Aldehyde dehydrogenase family MIT1002_03780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MIT1002_03780 PF00205 Thiamine pyrophosphate enzyme, central domain MIT1002_03780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MIT1002_03783 PF00762 Ferrochelatase MIT1002_03784 PF03806 AbgT putative transporter family MIT1002_03785 PF01145 SPFH domain / Band 7 family MIT1002_03786 PF12221 Bacterial membrane protein N terminal MIT1002_03786 PF01145 SPFH domain / Band 7 family MIT1002_03787 PF13167 GTP-binding GTPase N-terminal MIT1002_03787 PF16360 GTP-binding GTPase Middle Region MIT1002_03787 PF01926 50S ribosome-binding GTPase MIT1002_03788 PF17209 Hfq protein MIT1002_03790 PF01119 DNA mismatch repair protein, C-terminal domain MIT1002_03790 PF08676 MutL C terminal dimerisation domain MIT1002_03791 PF01520 N-acetylmuramoyl-L-alanine amidase MIT1002_03792 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MIT1002_03793 PF01256 Carbohydrate kinase MIT1002_03793 PF03853 YjeF-related protein N-terminus MIT1002_03794 PF08331 Domain of unknown function (DUF1730) MIT1002_03796 PF01208 Uroporphyrinogen decarboxylase (URO-D) MIT1002_03797 PF09297 NADH pyrophosphatase zinc ribbon domain MIT1002_03797 PF00293 NUDIX domain MIT1002_03798 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MIT1002_03799 PF01475 Ferric uptake regulator family MIT1002_03801 PF01894 Uncharacterised protein family UPF0047 MIT1002_03802 PF00691 OmpA family MIT1002_03802 PF05736 OprF membrane domain MIT1002_03803 PF00772 DnaB-like helicase N terminal domain MIT1002_03803 PF03796 DnaB-like helicase C terminal domain MIT1002_03808 PF03475 3-alpha domain MIT1002_03808 PF03473 MOSC domain MIT1002_03810 PF00486 Transcriptional regulatory protein, C terminal MIT1002_03810 PF00072 Response regulator receiver domain MIT1002_03811 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03811 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03811 PF00672 HAMP domain MIT1002_03811 PF16750 Sensor domain of 2-component histidine kinase MIT1002_03815 PF00873 AcrB/AcrD/AcrF family MIT1002_03816 PF01281 Ribosomal protein L9, N-terminal domain MIT1002_03816 PF03948 Ribosomal protein L9, C-terminal domain MIT1002_03817 PF01084 Ribosomal protein S18 MIT1002_03818 PF01250 Ribosomal protein S6 MIT1002_03820 PF00005 ABC transporter MIT1002_03822 PF08447 PAS fold MIT1002_03822 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_03823 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03823 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03823 PF00497 Bacterial extracellular solute-binding proteins, family 3 MIT1002_03824 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_03824 PF00672 HAMP domain MIT1002_03824 PF02743 Cache domain MIT1002_03827 PF03601 Conserved hypothetical protein 698 MIT1002_03828 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MIT1002_03829 PF00248 Aldo/keto reductase family MIT1002_03833 PF00474 Sodium:solute symporter family MIT1002_03834 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03834 PF00593 TonB dependent receptor MIT1002_03835 PF01545 Cation efflux family MIT1002_03835 PF16916 Dimerisation domain of Zinc Transporter MIT1002_03836 PF00722 Glycosyl hydrolases family 16 MIT1002_03838 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_03838 PF08448 PAS fold MIT1002_03839 PF03553 Na+/H+ antiporter family MIT1002_03840 PF00933 Glycosyl hydrolase family 3 N terminal domain MIT1002_03840 PF14310 Fibronectin type III-like domain MIT1002_03840 PF01915 Glycosyl hydrolase family 3 C-terminal domain MIT1002_03841 PF07690 Major Facilitator Superfamily MIT1002_03842 PF00232 Glycosyl hydrolase family 1 MIT1002_03843 PF00356 Bacterial regulatory proteins, lacI family MIT1002_03844 PF00083 Sugar (and other) transporter MIT1002_03845 PF00664 ABC transporter transmembrane region MIT1002_03845 PF00005 ABC transporter MIT1002_03846 PF00664 ABC transporter transmembrane region MIT1002_03846 PF00005 ABC transporter MIT1002_03847 PF08173 Membrane bound YbgT-like protein MIT1002_03848 PF02322 Cytochrome bd terminal oxidase subunit II MIT1002_03849 PF01654 Cytochrome bd terminal oxidase subunit I MIT1002_03851 PF02954 Bacterial regulatory protein, Fis family MIT1002_03851 PF00072 Response regulator receiver domain MIT1002_03851 PF00158 Sigma-54 interaction domain MIT1002_03856 PF13474 SnoaL-like domain MIT1002_03858 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03858 PF00593 TonB dependent receptor MIT1002_03861 PF02649 Type I GTP cyclohydrolase folE2 MIT1002_03869 PF05532 CsbD-like MIT1002_03872 PF08281 Sigma-70, region 4 MIT1002_03872 PF04542 Sigma-70 region 2 MIT1002_03877 PF00472 RF-1 domain MIT1002_03878 PF00364 Biotin-requiring enzyme MIT1002_03878 PF00561 alpha/beta hydrolase fold MIT1002_03883 PF01292 Prokaryotic cytochrome b561 MIT1002_03884 PF04264 YceI-like domain MIT1002_03885 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_03886 PF00593 TonB dependent receptor MIT1002_03886 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03888 PF01048 Phosphorylase superfamily MIT1002_03889 PF03466 LysR substrate binding domain MIT1002_03889 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_03890 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MIT1002_03891 PF16884 N-terminal domain of oxidoreductase MIT1002_03891 PF00107 Zinc-binding dehydrogenase MIT1002_03892 PF00360 Phytochrome region MIT1002_03892 PF00563 EAL domain MIT1002_03892 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_03892 PF01590 GAF domain MIT1002_03893 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03893 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03893 PF09308 LuxQ, periplasmic MIT1002_03893 PF00072 Response regulator receiver domain MIT1002_03895 PF00296 Luciferase-like monooxygenase MIT1002_03896 PF01380 SIS domain MIT1002_03897 PF08220 DeoR-like helix-turn-helix domain MIT1002_03897 PF00455 DeoR C terminal sensor domain MIT1002_03898 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MIT1002_03898 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MIT1002_03899 PF00132 Bacterial transferase hexapeptide (six repeats) MIT1002_03899 PF14602 Hexapeptide repeat of succinyl-transferase MIT1002_03899 PF12804 MobA-like NTP transferase domain MIT1002_03901 PF00892 EamA-like transporter family MIT1002_03902 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MIT1002_03902 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MIT1002_03903 PF00730 HhH-GPD superfamily base excision DNA repair protein MIT1002_03903 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain MIT1002_03904 PF00144 Beta-lactamase MIT1002_03905 PF17810 Arginine decarboxylase helical bundle domain MIT1002_03905 PF17944 Arginine decarboxylase C-terminal helical extension MIT1002_03905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MIT1002_03907 PF02233 NAD(P) transhydrogenase beta subunit MIT1002_03908 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MIT1002_03909 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MIT1002_03909 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MIT1002_03911 PF04820 Tryptophan halogenase MIT1002_03917 PF00593 TonB dependent receptor MIT1002_03917 PF07715 TonB-dependent Receptor Plug Domain MIT1002_03925 PF01040 UbiA prenyltransferase family MIT1002_03926 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MIT1002_03927 PF00510 Cytochrome c oxidase subunit III MIT1002_03928 PF00115 Cytochrome C and Quinol oxidase polypeptide I MIT1002_03929 PF06481 COX Aromatic Rich Motif MIT1002_03929 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MIT1002_03934 PF00544 Pectate lyase MIT1002_03935 PF00118 TCP-1/cpn60 chaperonin family MIT1002_03936 PF00166 Chaperonin 10 Kd subunit MIT1002_03937 PF04186 FxsA cytoplasmic membrane protein MIT1002_03938 PF03091 CutA1 divalent ion tolerance protein MIT1002_03939 PF11412 Disulphide bond corrector protein DsbC MIT1002_03939 PF02683 Cytochrome C biogenesis protein transmembrane region MIT1002_03940 PF01551 Peptidase family M23 MIT1002_03941 PF01220 Dehydroquinase class II MIT1002_03942 PF00364 Biotin-requiring enzyme MIT1002_03943 PF02785 Biotin carboxylase C-terminal domain MIT1002_03943 PF00289 Biotin carboxylase, N-terminal domain MIT1002_03943 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MIT1002_03947 PF11490 DNA polymerase III polC-type N-terminus II MIT1002_03947 PF07733 Bacterial DNA polymerase III alpha NTPase domain MIT1002_03947 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MIT1002_03947 PF14579 Helix-hairpin-helix motif MIT1002_03947 PF02811 PHP domain MIT1002_03947 PF00929 Exonuclease MIT1002_03950 PF01355 High potential iron-sulfur protein MIT1002_03954 PF01425 Amidase MIT1002_03957 PF01207 Dihydrouridine synthase (Dus) MIT1002_03958 PF02954 Bacterial regulatory protein, Fis family MIT1002_03959 PF02142 MGS-like domain MIT1002_03959 PF01808 AICARFT/IMPCHase bienzyme MIT1002_03961 PF02844 Phosphoribosylglycinamide synthetase, N domain MIT1002_03961 PF02843 Phosphoribosylglycinamide synthetase, C domain MIT1002_03961 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MIT1002_03964 PF00520 Ion transport protein MIT1002_03964 PF00027 Cyclic nucleotide-binding domain MIT1002_03965 PF00485 Phosphoribulokinase / Uridine kinase family MIT1002_03968 PF00072 Response regulator receiver domain MIT1002_03968 PF00486 Transcriptional regulatory protein, C terminal MIT1002_03969 PF00672 HAMP domain MIT1002_03969 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_03969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_03971 PF17137 Domain of unknown function (DUF5110) MIT1002_03971 PF01055 Glycosyl hydrolases family 31 MIT1002_03971 PF13802 Galactose mutarotase-like MIT1002_03971 PF16338 Domain of unknown function (DUF4968) MIT1002_03972 PF01293 Phosphoenolpyruvate carboxykinase MIT1002_03973 PF01430 Hsp33 protein MIT1002_03974 PF01479 S4 domain MIT1002_03975 PF11356 Type II secretion system protein C MIT1002_03976 PF00263 Bacterial type II and III secretion system protein MIT1002_03976 PF03958 Bacterial type II/III secretion system short domain MIT1002_03977 PF00437 Type II/IV secretion system protein MIT1002_03978 PF00482 Type II secretion system (T2SS), protein F MIT1002_03979 PF07963 Prokaryotic N-terminal methylation motif MIT1002_03979 PF08334 Type II secretion system (T2SS), protein G MIT1002_03980 PF12019 Type II transport protein GspH MIT1002_03981 PF07963 Prokaryotic N-terminal methylation motif MIT1002_03981 PF02501 Type II secretion system (T2SS), protein I MIT1002_03982 PF07963 Prokaryotic N-terminal methylation motif MIT1002_03982 PF11612 Type II secretion system (T2SS), protein J MIT1002_03984 PF12693 GspL periplasmic domain MIT1002_03984 PF05134 Type II secretion system (T2SS), protein L MIT1002_03985 PF04612 Type II secretion system (T2SS), protein M MIT1002_03988 PF12706 Beta-lactamase superfamily domain MIT1002_03989 PF00171 Aldehyde dehydrogenase family MIT1002_03990 PF01931 Protein of unknown function DUF84 MIT1002_03991 PF13419 Haloacid dehalogenase-like hydrolase MIT1002_03992 PF00293 NUDIX domain MIT1002_03993 PF00459 Inositol monophosphatase family MIT1002_03995 PF00535 Glycosyl transferase family 2 MIT1002_03996 PF04349 Periplasmic glucan biosynthesis protein, MdoG MIT1002_03998 PF06794 Uncharacterised protein family (UPF0270) MIT1002_03999 PF00561 alpha/beta hydrolase fold MIT1002_04001 PF00005 ABC transporter MIT1002_04001 PF12848 ABC transporter MIT1002_04005 PF04102 SlyX MIT1002_04007 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MIT1002_04007 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MIT1002_04011 PF01272 Transcription elongation factor, GreA/GreB, C-term MIT1002_04011 PF03449 Transcription elongation factor, N-terminal MIT1002_04012 PF17674 HHH domain MIT1002_04012 PF00575 S1 RNA binding domain MIT1002_04012 PF09371 Tex-like protein N-terminal domain MIT1002_04012 PF16921 Tex protein YqgF-like domain MIT1002_04016 PF00561 alpha/beta hydrolase fold MIT1002_04017 PF00156 Phosphoribosyl transferase domain MIT1002_04019 PF01106 NifU-like domain MIT1002_04019 PF01521 Iron-sulphur cluster biosynthesis MIT1002_04020 PF01177 Asp/Glu/Hydantoin racemase MIT1002_04023 PF01554 MatE MIT1002_04026 PF02630 SCO1/SenC MIT1002_04027 PF01040 UbiA prenyltransferase family MIT1002_04028 PF02628 Cytochrome oxidase assembly protein MIT1002_04032 PF00510 Cytochrome c oxidase subunit III MIT1002_04033 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 MIT1002_04034 PF00115 Cytochrome C and Quinol oxidase polypeptide I MIT1002_04035 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MIT1002_04035 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MIT1002_04036 PF00717 Peptidase S24-like MIT1002_04036 PF01726 LexA DNA binding domain MIT1002_04038 PF17151 Periplasmic sensor domain MIT1002_04038 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_04039 PF01553 Acyltransferase MIT1002_04040 PF00291 Pyridoxal-phosphate dependent enzyme MIT1002_04040 PF00585 C-terminal regulatory domain of Threonine dehydratase MIT1002_04041 PF00920 Dehydratase family MIT1002_04042 PF03458 UPF0126 domain MIT1002_04043 PF13335 Magnesium chelatase, subunit ChlI C-terminal MIT1002_04043 PF01078 Magnesium chelatase, subunit ChlI MIT1002_04044 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MIT1002_04044 PF03466 LysR substrate binding domain MIT1002_04045 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MIT1002_04045 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MIT1002_04046 PF07690 Major Facilitator Superfamily MIT1002_04047 PF00326 Prolyl oligopeptidase family MIT1002_04048 PF07244 Surface antigen variable number repeat MIT1002_04048 PF17243 POTRA domain TamA domain 1 MIT1002_04048 PF01103 Surface antigen MIT1002_04049 PF04357 TamB, inner membrane protein subunit of TAM complex MIT1002_04054 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MIT1002_04054 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MIT1002_04056 PF01472 PUA domain MIT1002_04056 PF00696 Amino acid kinase family MIT1002_04060 PF03109 ABC1 family MIT1002_04065 PF01979 Amidohydrolase family MIT1002_04069 PF01206 Sulfurtransferase TusA MIT1002_04070 PF00156 Phosphoribosyl transferase domain MIT1002_04071 PF01138 3' exoribonuclease family, domain 1 MIT1002_04071 PF03725 3' exoribonuclease family, domain 2 MIT1002_04072 PF08340 Domain of unknown function (DUF1732) MIT1002_04072 PF03755 YicC-like family, N-terminal region MIT1002_04087 PF18766 SWI2/SNF2 ATPase MIT1002_04087 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MIT1002_04087 PF11867 Domain of unknown function (DUF3387) MIT1002_04089 PF00271 Helicase conserved C-terminal domain MIT1002_04089 PF04851 Type III restriction enzyme, res subunit MIT1002_04089 PF02151 UvrB/uvrC motif MIT1002_04089 PF12344 Ultra-violet resistance protein B MIT1002_04089 PF17757 UvrB interaction domain MIT1002_04092 PF02384 N-6 DNA Methylase MIT1002_04092 PF12161 HsdM N-terminal domain MIT1002_04096 PF01381 Helix-turn-helix MIT1002_04098 PF04820 Tryptophan halogenase MIT1002_04099 PF04820 Tryptophan halogenase MIT1002_04101 PF00232 Glycosyl hydrolase family 1 MIT1002_04103 PF00356 Bacterial regulatory proteins, lacI family MIT1002_04106 PF05736 OprF membrane domain MIT1002_04106 PF00691 OmpA family MIT1002_04107 PF01966 HD domain MIT1002_04110 PF02798 Glutathione S-transferase, N-terminal domain MIT1002_04110 PF00043 Glutathione S-transferase, C-terminal domain MIT1002_04112 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MIT1002_04112 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MIT1002_04113 PF02874 ATP synthase alpha/beta family, beta-barrel domain MIT1002_04113 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIT1002_04114 PF00231 ATP synthase MIT1002_04115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MIT1002_04115 PF02874 ATP synthase alpha/beta family, beta-barrel domain MIT1002_04115 PF00306 ATP synthase alpha/beta chain, C terminal domain MIT1002_04116 PF00213 ATP synthase delta (OSCP) subunit MIT1002_04117 PF00430 ATP synthase B/B' CF(0) MIT1002_04118 PF00137 ATP synthase subunit C MIT1002_04119 PF00119 ATP synthase A chain MIT1002_04121 PF17762 HTH domain found in ParB protein MIT1002_04121 PF02195 ParB-like nuclease domain MIT1002_04122 PF13614 AAA domain MIT1002_04123 PF02527 rRNA small subunit methyltransferase G MIT1002_04124 PF01134 Glucose inhibited division protein A MIT1002_04124 PF13932 GidA associated domain MIT1002_04127 PF00258 Flavodoxin MIT1002_04128 PF10396 GTP-binding protein TrmE N-terminus MIT1002_04128 PF12631 MnmE helical domain MIT1002_04128 PF01926 50S ribosome-binding GTPase MIT1002_04129 PF04461 Protein of unknown function (DUF520) MIT1002_04130 PF02096 60Kd inner membrane protein MIT1002_04130 PF14849 YidC periplasmic domain MIT1002_04131 PF01809 Putative membrane protein insertion efficiency factor MIT1002_04132 PF00825 Ribonuclease P MIT1002_04133 PF00468 Ribosomal protein L34 MIT1002_04134 PF13614 AAA domain MIT1002_04141 PF01609 Transposase DDE domain MIT1002_04141 PF05598 Transposase domain (DUF772) MIT1002_04142 PF01609 Transposase DDE domain MIT1002_04142 PF05598 Transposase domain (DUF772) MIT1002_04146 PF02796 Helix-turn-helix domain of resolvase MIT1002_04146 PF00239 Resolvase, N terminal domain MIT1002_04151 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MIT1002_04151 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MIT1002_04151 PF00034 Cytochrome c MIT1002_04152 PF00115 Cytochrome C and Quinol oxidase polypeptide I MIT1002_04155 PF04324 BFD-like [2Fe-2S] binding domain MIT1002_04155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MIT1002_04155 PF18267 Rubredoxin NAD+ reductase C-terminal domain MIT1002_04155 PF07992 Pyridine nucleotide-disulphide oxidoreductase MIT1002_04166 PF13657 HipA N-terminal domain MIT1002_04166 PF07804 HipA-like C-terminal domain MIT1002_04167 PF01381 Helix-turn-helix MIT1002_04173 PF01527 Transposase MIT1002_04198 PF02371 Transposase IS116/IS110/IS902 family MIT1002_04198 PF01548 Transposase MIT1002_04199 PF02371 Transposase IS116/IS110/IS902 family MIT1002_04199 PF01548 Transposase MIT1002_04200 PF03527 RHS protein MIT1002_04202 PF13700 Domain of unknown function (DUF4158) MIT1002_04202 PF01526 Tn3 transposase DDE domain MIT1002_04203 PF09828 Chromate resistance exported protein MIT1002_04204 PF02417 Chromate transporter MIT1002_04213 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_04213 PF13426 PAS domain MIT1002_04213 PF00072 Response regulator receiver domain MIT1002_04214 PF13188 PAS domain MIT1002_04214 PF08448 PAS fold MIT1002_04214 PF00512 His Kinase A (phospho-acceptor) domain MIT1002_04214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_04214 PF00072 Response regulator receiver domain MIT1002_04215 PF00563 EAL domain MIT1002_04215 PF01590 GAF domain MIT1002_04215 PF00990 Diguanylate cyclase, GGDEF domain MIT1002_04215 PF00360 Phytochrome region MIT1002_04217 PF01739 CheR methyltransferase, SAM binding domain MIT1002_04220 PF17200 Single Cache domain 2 MIT1002_04220 PF00672 HAMP domain MIT1002_04220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MIT1002_04221 PF01584 CheW-like domain MIT1002_04221 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MIT1002_04221 PF01627 Hpt domain MIT1002_04221 PF00072 Response regulator receiver domain MIT1002_04222 PF01339 CheB methylesterase MIT1002_04222 PF00072 Response regulator receiver domain