AVL55_00130	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AVL55_00145	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AVL55_00240	PWY-7851	AVL55_00240
AVL55_00290	PWY-7851	AVL55_00290
AVL55_00295	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AVL55_00295	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AVL55_00320	PWY-7378	aminopropanol phosphate biosynthesis II
AVL55_00325	PWY-5350	thiosulfate disproportionation III (rhodanese)
AVL55_00325	PWY-7927	AVL55_00325
AVL55_00340	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AVL55_00340	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AVL55_00340	PWY-6148	tetrahydromethanopterin biosynthesis
AVL55_00340	PWY-7742	AVL55_00340
AVL55_00340	PWY-7745	AVL55_00340
AVL55_00340	PWY-7929	AVL55_00340
AVL55_00340	PWY-7934	AVL55_00340
AVL55_00340	PWY-7935	AVL55_00340
AVL55_00500	PWY-6892	thiazole biosynthesis I (E. coli)
AVL55_00500	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AVL55_00505	PWY-6891	thiazole biosynthesis II (Bacillus)
AVL55_00505	PWY-6892	thiazole biosynthesis I (E. coli)
AVL55_00520	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AVL55_00520	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AVL55_00520	PWY-6897	thiamin salvage II
AVL55_00520	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AVL55_00520	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AVL55_00520	PWY-7356	thiamin salvage IV (yeast)
AVL55_00520	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AVL55_00525	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AVL55_00540	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AVL55_00540	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AVL55_00545	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AVL55_00545	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AVL55_00560	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AVL55_00760	PWY-6168	flavin biosynthesis III (fungi)
AVL55_00760	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AVL55_00760	PWY-7991	AVL55_00760
AVL55_00810	PWY-6936	seleno-amino acid biosynthesis
AVL55_00810	PWY-7274	D-cycloserine biosynthesis
AVL55_00810	PWY-7870	AVL55_00810
AVL55_00835	PWY-2941	L-lysine biosynthesis II
AVL55_00835	PWY-5097	L-lysine biosynthesis VI
AVL55_00840	PWY-2941	L-lysine biosynthesis II
AVL55_00840	PWY-2942	L-lysine biosynthesis III
AVL55_00840	PWY-5097	L-lysine biosynthesis VI
AVL55_00875	PWY-7883	AVL55_00875
AVL55_00880	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_00885	PWY-7805	AVL55_00885
AVL55_00885	PWY-7807	AVL55_00885
AVL55_00940	PWY-6317	galactose degradation I (Leloir pathway)
AVL55_00945	PWY-6317	galactose degradation I (Leloir pathway)
AVL55_00945	PWY-6527	stachyose degradation
AVL55_00950	PWY-3821	galactose degradation III
AVL55_00950	PWY-6317	galactose degradation I (Leloir pathway)
AVL55_00950	PWY-6527	stachyose degradation
AVL55_01025	PWY-6807	xyloglucan degradation II (exoglucanase)
AVL55_01035	PWY-4261	glycerol degradation I
AVL55_01045	PWY-4261	glycerol degradation I
AVL55_01045	PWY-6118	glycerol-3-phosphate shuttle
AVL55_01045	PWY-6952	glycerophosphodiester degradation
AVL55_01125	PWY-6807	xyloglucan degradation II (exoglucanase)
AVL55_01140	PWY-622	starch biosynthesis
AVL55_01260	PWY-6825	phosphatidylcholine biosynthesis V
AVL55_01315	PWY-7039	phosphatidate metabolism, as a signaling molecule
AVL55_01315	PWY-7817	AVL55_01315
AVL55_01510	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AVL55_01550	PWY-5057	L-valine degradation II
AVL55_01550	PWY-5076	L-leucine degradation III
AVL55_01550	PWY-5078	L-isoleucine degradation II
AVL55_01550	PWY-5101	L-isoleucine biosynthesis II
AVL55_01550	PWY-5103	L-isoleucine biosynthesis III
AVL55_01550	PWY-5104	L-isoleucine biosynthesis IV
AVL55_01550	PWY-5108	L-isoleucine biosynthesis V
AVL55_01550	PWY-7767	AVL55_01550
AVL55_01555	PWY-1622	formaldehyde assimilation I (serine pathway)
AVL55_01555	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_01645	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AVL55_01690	PWY-2201	folate transformations I
AVL55_01690	PWY-5497	purine nucleobases degradation II (anaerobic)
AVL55_01690	PWY-7909	AVL55_01690
AVL55_01715	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AVL55_01715	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AVL55_01715	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AVL55_01715	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AVL55_01785	PWY-4041	&gamma;-glutamyl cycle
AVL55_01785	PWY-4061	glutathione-mediated detoxification I
AVL55_01785	PWY-5826	hypoglycin biosynthesis
AVL55_01785	PWY-6842	glutathione-mediated detoxification II
AVL55_01785	PWY-7112	4-hydroxy-2-nonenal detoxification
AVL55_01785	PWY-7559	glutathione degradation (DUG pathway - yeast)
AVL55_01795	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AVL55_01800	PWY-5686	UMP biosynthesis
AVL55_01800	PWY-7790	AVL55_01800
AVL55_01800	PWY-7791	AVL55_01800
AVL55_01870	PWY-5958	acridone alkaloid biosynthesis
AVL55_01870	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AVL55_01870	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AVL55_01880	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AVL55_01880	PWY-5723	Rubisco shunt
AVL55_01910	PWY-6164	3-dehydroquinate biosynthesis I
AVL55_01915	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AVL55_01945	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AVL55_01945	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AVL55_01945	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AVL55_01945	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AVL55_01950	PWY-6339	syringate degradation
AVL55_01985	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AVL55_01990	PWY-4983	L-citrulline-nitric oxide cycle
AVL55_01990	PWY-4984	urea cycle
AVL55_01990	PWY-5	canavanine biosynthesis
AVL55_01990	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AVL55_01990	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AVL55_01995	PWY-4983	L-citrulline-nitric oxide cycle
AVL55_01995	PWY-4984	urea cycle
AVL55_01995	PWY-5	canavanine biosynthesis
AVL55_01995	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AVL55_01995	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AVL55_02000	PWY-4981	L-proline biosynthesis II (from arginine)
AVL55_02000	PWY-4984	urea cycle
AVL55_02000	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AVL55_02005	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AVL55_02005	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AVL55_02010	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AVL55_02010	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AVL55_02060	PWY-5667	CDP-diacylglycerol biosynthesis I
AVL55_02060	PWY-5981	CDP-diacylglycerol biosynthesis III
AVL55_02060	PWY-7902	AVL55_02060
AVL55_02105	PWY-5669	phosphatidylethanolamine biosynthesis I
AVL55_02135	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AVL55_02135	PWY-622	starch biosynthesis
AVL55_02135	PWY-7900	AVL55_02135
AVL55_02150	PWY-5101	L-isoleucine biosynthesis II
AVL55_02150	PWY-5103	L-isoleucine biosynthesis III
AVL55_02150	PWY-5104	L-isoleucine biosynthesis IV
AVL55_02150	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AVL55_02150	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AVL55_02150	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AVL55_02150	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AVL55_02155	PWY-5101	L-isoleucine biosynthesis II
AVL55_02155	PWY-5103	L-isoleucine biosynthesis III
AVL55_02155	PWY-5104	L-isoleucine biosynthesis IV
AVL55_02155	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AVL55_02155	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AVL55_02155	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AVL55_02155	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AVL55_02195	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AVL55_02195	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AVL55_02215	PWY-7980	AVL55_02215
AVL55_02235	PWY-6123	inosine-5'-phosphate biosynthesis I
AVL55_02235	PWY-7234	inosine-5'-phosphate biosynthesis III
AVL55_02295	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AVL55_02315	PWY-4041	&gamma;-glutamyl cycle
AVL55_02315	PWY-4061	glutathione-mediated detoxification I
AVL55_02315	PWY-5826	hypoglycin biosynthesis
AVL55_02315	PWY-6842	glutathione-mediated detoxification II
AVL55_02315	PWY-7112	4-hydroxy-2-nonenal detoxification
AVL55_02315	PWY-7559	glutathione degradation (DUG pathway - yeast)
AVL55_02345	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AVL55_02395	PWY-1622	formaldehyde assimilation I (serine pathway)
AVL55_02395	PWY-181	photorespiration
AVL55_02395	PWY-2161	folate polyglutamylation
AVL55_02395	PWY-2201	folate transformations I
AVL55_02395	PWY-3661	glycine betaine degradation I
AVL55_02395	PWY-3661-1	glycine betaine degradation II (mammalian)
AVL55_02395	PWY-3841	folate transformations II
AVL55_02395	PWY-5497	purine nucleobases degradation II (anaerobic)
AVL55_02520	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AVL55_02520	PWY-6435	4-hydroxybenzoate biosynthesis V
AVL55_02520	PWY-6863	pyruvate fermentation to hexanol
AVL55_02520	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AVL55_02520	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AVL55_02520	PWY-6948	sitosterol degradation to androstenedione
AVL55_02520	PWY-7094	fatty acid salvage
AVL55_02520	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AVL55_02520	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AVL55_02520	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AVL55_02520	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AVL55_02520	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AVL55_02520	PWY-735	jasmonic acid biosynthesis
AVL55_02520	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AVL55_02520	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AVL55_02520	PWY-7726	AVL55_02520
AVL55_02525	PWY-1361	benzoyl-CoA degradation I (aerobic)
AVL55_02525	PWY-5109	2-methylbutanoate biosynthesis
AVL55_02525	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AVL55_02525	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AVL55_02525	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AVL55_02525	PWY-5177	glutaryl-CoA degradation
AVL55_02525	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AVL55_02525	PWY-6435	4-hydroxybenzoate biosynthesis V
AVL55_02525	PWY-6583	pyruvate fermentation to butanol I
AVL55_02525	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AVL55_02525	PWY-6863	pyruvate fermentation to hexanol
AVL55_02525	PWY-6883	pyruvate fermentation to butanol II
AVL55_02525	PWY-6944	androstenedione degradation
AVL55_02525	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AVL55_02525	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AVL55_02525	PWY-7007	methyl ketone biosynthesis
AVL55_02525	PWY-7046	4-coumarate degradation (anaerobic)
AVL55_02525	PWY-7094	fatty acid salvage
AVL55_02525	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AVL55_02525	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AVL55_02525	PWY-7292	oleate &beta;-oxidation (thioesterase-dependent, yeast)
AVL55_02525	PWY-7307	oleate &beta;-oxidation (reductase-dependent, yeast)
AVL55_02525	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AVL55_02525	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AVL55_02525	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AVL55_02525	PWY-735	jasmonic acid biosynthesis
AVL55_02525	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AVL55_02525	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AVL55_02525	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AVL55_02525	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AVL55_02525	PWY-7726	AVL55_02525
AVL55_02525	PWY-7778	AVL55_02525
AVL55_02525	PWY-7779	AVL55_02525
AVL55_02570	PWY-6854	ethylene biosynthesis III (microbes)
AVL55_02590	PWY-3841	folate transformations II
AVL55_02590	PWY-6614	tetrahydrofolate biosynthesis
AVL55_02620	PWY-7560	methylerythritol phosphate pathway II
AVL55_02625	PWY-7560	methylerythritol phosphate pathway II
AVL55_02660	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AVL55_02660	PWY-6853	ethylene biosynthesis II (microbes)
AVL55_02660	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AVL55_02730	PWY-3841	folate transformations II
AVL55_02730	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AVL55_02730	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AVL55_02730	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AVL55_02730	PWY-7199	pyrimidine deoxyribonucleosides salvage
AVL55_02730	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AVL55_02805	PWY-5194	siroheme biosynthesis
AVL55_02805	PWY-5196	factor 430 biosynthesis
AVL55_02805	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AVL55_02955	PWY-6683	sulfate reduction III (assimilatory)
AVL55_02970	PWY-5194	siroheme biosynthesis
AVL55_02970	PWY-5196	factor 430 biosynthesis
AVL55_02970	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AVL55_03140	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AVL55_03140	PWY-6148	tetrahydromethanopterin biosynthesis
AVL55_03140	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AVL55_03140	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AVL55_03145	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AVL55_03145	PWY-6148	tetrahydromethanopterin biosynthesis
AVL55_03145	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AVL55_03145	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AVL55_03145	PWY-7852	AVL55_03145
AVL55_03145	PWY-7853	AVL55_03145
AVL55_03150	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AVL55_03265	PWY-5747	2-methylcitrate cycle II
AVL55_03290	PWY-5747	2-methylcitrate cycle II
AVL55_03300	PWY-2941	L-lysine biosynthesis II
AVL55_03300	PWY-2942	L-lysine biosynthesis III
AVL55_03300	PWY-5097	L-lysine biosynthesis VI
AVL55_03300	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AVL55_03300	PWY-6559	spermidine biosynthesis II
AVL55_03300	PWY-6562	norspermidine biosynthesis
AVL55_03300	PWY-7153	grixazone biosynthesis
AVL55_03300	PWY-7977	AVL55_03300
AVL55_03365	PWY-7805	AVL55_03365
AVL55_03365	PWY-7807	AVL55_03365
AVL55_03385	PWY-6012	acyl carrier protein metabolism I
AVL55_03385	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AVL55_03385	PWY-6289	petrobactin biosynthesis
AVL55_03410	PWY-6174	mevalonate pathway II (archaea)
AVL55_03410	PWY-7391	isoprene biosynthesis II (engineered)
AVL55_03410	PWY-7524	mevalonate pathway III (archaea)
AVL55_03410	PWY-922	mevalonate pathway I
AVL55_03500	PWY-3781	aerobic respiration I (cytochrome c)
AVL55_03500	PWY-6692	Fe(II) oxidation
AVL55_03500	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AVL55_03500	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AVL55_03570	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AVL55_03570	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AVL55_03615	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AVL55_03615	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AVL55_03615	PWY-7953	AVL55_03615
AVL55_03670	PWY-4041	&gamma;-glutamyl cycle
AVL55_03670	PWY-4061	glutathione-mediated detoxification I
AVL55_03670	PWY-5826	hypoglycin biosynthesis
AVL55_03670	PWY-6842	glutathione-mediated detoxification II
AVL55_03670	PWY-7112	4-hydroxy-2-nonenal detoxification
AVL55_03670	PWY-7559	glutathione degradation (DUG pathway - yeast)
AVL55_03720	PWY-5913	TCA cycle VI (obligate autotrophs)
AVL55_03720	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AVL55_03720	PWY-6638	sulfolactate degradation III
AVL55_03720	PWY-6642	(<i>R</i>)-cysteate degradation
AVL55_03720	PWY-6643	coenzyme M biosynthesis II
AVL55_03720	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AVL55_03720	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AVL55_03720	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AVL55_03915	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AVL55_03915	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AVL55_03920	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AVL55_03920	PWY-5723	Rubisco shunt
AVL55_03920	PWY-6891	thiazole biosynthesis II (Bacillus)
AVL55_03920	PWY-6892	thiazole biosynthesis I (E. coli)
AVL55_03920	PWY-6901	superpathway of glucose and xylose degradation
AVL55_03920	PWY-7560	methylerythritol phosphate pathway II
AVL55_03930	PWY-1042	glycolysis IV (plant cytosol)
AVL55_03930	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_03930	PWY-6886	1-butanol autotrophic biosynthesis
AVL55_03930	PWY-6901	superpathway of glucose and xylose degradation
AVL55_03930	PWY-7003	glycerol degradation to butanol
AVL55_03935	PWY-1042	glycolysis IV (plant cytosol)
AVL55_03935	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AVL55_03935	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_03935	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_03935	PWY-7385	1,3-propanediol biosynthesis (engineered)
AVL55_03940	PWY-7039	phosphatidate metabolism, as a signaling molecule
AVL55_03940	PWY-7817	AVL55_03940
AVL55_04140	PWY-5028	L-histidine degradation II
AVL55_04140	PWY-5030	L-histidine degradation III
AVL55_04150	PWY-5028	L-histidine degradation II
AVL55_04150	PWY-5030	L-histidine degradation III
AVL55_04155	PWY-5028	L-histidine degradation II
AVL55_04155	PWY-5030	L-histidine degradation III
AVL55_04180	PWY-6906	chitin derivatives degradation
AVL55_04180	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AVL55_04180	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AVL55_04415	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AVL55_04420	PWY-6871	3-methylbutanol biosynthesis
AVL55_04430	PWY-1042	glycolysis IV (plant cytosol)
AVL55_04430	PWY-1622	formaldehyde assimilation I (serine pathway)
AVL55_04430	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AVL55_04430	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_04430	PWY-5723	Rubisco shunt
AVL55_04430	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_04430	PWY-6886	1-butanol autotrophic biosynthesis
AVL55_04430	PWY-6901	superpathway of glucose and xylose degradation
AVL55_04430	PWY-7003	glycerol degradation to butanol
AVL55_04430	PWY-7124	ethylene biosynthesis V (engineered)
AVL55_04430	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AVL55_04435	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AVL55_04435	PWY-7177	UTP and CTP dephosphorylation II
AVL55_04435	PWY-7185	UTP and CTP dephosphorylation I
AVL55_04535	PWY-3821	galactose degradation III
AVL55_04535	PWY-6317	galactose degradation I (Leloir pathway)
AVL55_04535	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AVL55_04535	PWY-6527	stachyose degradation
AVL55_04535	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AVL55_04535	PWY-7344	UDP-D-galactose biosynthesis
AVL55_04575	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AVL55_04575	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AVL55_04575	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AVL55_04575	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
AVL55_04575	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
AVL55_04575	PWY-7815	AVL55_04575
AVL55_04575	PWY-7816	AVL55_04575
AVL55_04575	PWY-7819	AVL55_04575
AVL55_04575	PWY-7905	AVL55_04575
AVL55_04590	PWY-3801	sucrose degradation II (sucrose synthase)
AVL55_04590	PWY-6527	stachyose degradation
AVL55_04590	PWY-7238	sucrose biosynthesis II
AVL55_04590	PWY-7343	UDP-glucose biosynthesis
AVL55_04590	PWY-7817	AVL55_04590
AVL55_04615	PWY-6617	adenosine nucleotides degradation III
AVL55_04615	PWY-7569	arginomycin biosynthesis
AVL55_04615	PWY-7570	blasticidin S biosynthesis
AVL55_04625	PWY-6700	queuosine biosynthesis
AVL55_04685	PWY-7799	AVL55_04685
AVL55_04685	PWY-7800	AVL55_04685
AVL55_04715	PWY-5667	CDP-diacylglycerol biosynthesis I
AVL55_04715	PWY-5981	CDP-diacylglycerol biosynthesis III
AVL55_04715	PWY-7817	AVL55_04715
AVL55_04720	PWY-7560	methylerythritol phosphate pathway II
AVL55_04740	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AVL55_04740	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AVL55_04740	PWY-5989	stearate biosynthesis II (bacteria and plants)
AVL55_04740	PWY-5994	palmitate biosynthesis I (animals and fungi)
AVL55_04740	PWY-6113	superpathway of mycolate biosynthesis
AVL55_04740	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AVL55_04740	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AVL55_04740	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AVL55_04740	PWY-7663	gondoate biosynthesis (anaerobic)
AVL55_04740	PWY-7664	oleate biosynthesis IV (anaerobic)
AVL55_04740	PWY-7858	AVL55_04740
AVL55_04740	PWYG-321	mycolate biosynthesis
AVL55_04765	PWY-4381	fatty acid biosynthesis initiation I
AVL55_04765	PWY-5743	3-hydroxypropanoate cycle
AVL55_04765	PWY-5744	glyoxylate assimilation
AVL55_04765	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AVL55_04765	PWY-6722	candicidin biosynthesis
AVL55_04800	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AVL55_04800	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AVL55_04800	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AVL55_04945	PWY-6143	CMP-pseudaminate biosynthesis
AVL55_04945	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
AVL55_04945	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
AVL55_04945	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
AVL55_04945	PWY-7719	AVL55_04945
AVL55_04955	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AVL55_04955	PWY-6143	CMP-pseudaminate biosynthesis
AVL55_04960	PWY-6143	CMP-pseudaminate biosynthesis
AVL55_04990	PWY-7723	AVL55_04990
AVL55_04995	PWY-7723	AVL55_04995
AVL55_05050	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AVL55_05050	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AVL55_05050	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AVL55_05135	PWY-7980	AVL55_05135
AVL55_05260	PWY-2201	folate transformations I
AVL55_05260	PWY-3841	folate transformations II
AVL55_05260	PWY-7977	AVL55_05260
AVL55_05270	PWY-5532	adenosine nucleotides degradation IV
AVL55_05270	PWY-7181	pyrimidine deoxyribonucleosides degradation
AVL55_05290	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AVL55_05290	PWY-5743	3-hydroxypropanoate cycle
AVL55_05290	PWY-5744	glyoxylate assimilation
AVL55_05290	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AVL55_05290	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_05290	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AVL55_05290	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AVL55_05415	PWY-6134	L-tyrosine biosynthesis IV
AVL55_05415	PWY-7158	L-phenylalanine degradation V
AVL55_06055	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AVL55_06255	PWY-6654	phosphopantothenate biosynthesis III
AVL55_06275	PWY-6840	homoglutathione biosynthesis
AVL55_06275	PWY-7255	ergothioneine biosynthesis I (bacteria)
AVL55_06305	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AVL55_06330	PWY-6854	ethylene biosynthesis III (microbes)
AVL55_06385	PWY-5386	methylglyoxal degradation I
AVL55_06465	PWY-6703	preQ<sub>0</sub> biosynthesis
AVL55_06470	PWY-6703	preQ<sub>0</sub> biosynthesis
AVL55_06505	PWY-5278	sulfite oxidation III
AVL55_06505	PWY-5340	sulfate activation for sulfonation
AVL55_06505	PWY-6683	sulfate reduction III (assimilatory)
AVL55_06505	PWY-6932	selenate reduction
AVL55_06515	PWY-5340	sulfate activation for sulfonation
AVL55_06520	PWY-5278	sulfite oxidation III
AVL55_06520	PWY-5340	sulfate activation for sulfonation
AVL55_06520	PWY-6683	sulfate reduction III (assimilatory)
AVL55_06520	PWY-6932	selenate reduction
AVL55_06580	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AVL55_06580	PWY-6435	4-hydroxybenzoate biosynthesis V
AVL55_06580	PWY-6863	pyruvate fermentation to hexanol
AVL55_06580	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AVL55_06580	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AVL55_06580	PWY-6948	sitosterol degradation to androstenedione
AVL55_06580	PWY-7094	fatty acid salvage
AVL55_06580	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AVL55_06580	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AVL55_06580	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AVL55_06580	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AVL55_06580	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AVL55_06580	PWY-735	jasmonic acid biosynthesis
AVL55_06580	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AVL55_06580	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AVL55_06580	PWY-7726	AVL55_06580
AVL55_06585	PWY-1361	benzoyl-CoA degradation I (aerobic)
AVL55_06585	PWY-5109	2-methylbutanoate biosynthesis
AVL55_06585	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AVL55_06585	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AVL55_06585	PWY-5177	glutaryl-CoA degradation
AVL55_06585	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AVL55_06585	PWY-6435	4-hydroxybenzoate biosynthesis V
AVL55_06585	PWY-6583	pyruvate fermentation to butanol I
AVL55_06585	PWY-6863	pyruvate fermentation to hexanol
AVL55_06585	PWY-6883	pyruvate fermentation to butanol II
AVL55_06585	PWY-6944	androstenedione degradation
AVL55_06585	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AVL55_06585	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AVL55_06585	PWY-7007	methyl ketone biosynthesis
AVL55_06585	PWY-7046	4-coumarate degradation (anaerobic)
AVL55_06585	PWY-7094	fatty acid salvage
AVL55_06585	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AVL55_06585	PWY-735	jasmonic acid biosynthesis
AVL55_06585	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AVL55_06585	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AVL55_06585	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AVL55_06585	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AVL55_06585	PWY-7726	AVL55_06585
AVL55_06585	PWY-7778	AVL55_06585
AVL55_06585	PWY-7779	AVL55_06585
AVL55_06700	PWY-6829	tRNA methylation (yeast)
AVL55_06700	PWY-7285	methylwyosine biosynthesis
AVL55_06700	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AVL55_06720	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AVL55_06720	PWY-6164	3-dehydroquinate biosynthesis I
AVL55_06720	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AVL55_06725	PWY-3461	L-tyrosine biosynthesis II
AVL55_06725	PWY-3462	L-phenylalanine biosynthesis II
AVL55_06725	PWY-6120	L-tyrosine biosynthesis III
AVL55_06725	PWY-6627	salinosporamide A biosynthesis
AVL55_06725	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AVL55_06725	PWY-7626	bacilysin biosynthesis
AVL55_06730	PWY-3461	L-tyrosine biosynthesis II
AVL55_06730	PWY-3462	L-phenylalanine biosynthesis II
AVL55_06730	PWY-6120	L-tyrosine biosynthesis III
AVL55_06730	PWY-6627	salinosporamide A biosynthesis
AVL55_06730	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AVL55_06730	PWY-7626	bacilysin biosynthesis
AVL55_06800	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AVL55_06865	PWY-5316	nicotine biosynthesis
AVL55_06865	PWY-7342	superpathway of nicotine biosynthesis
AVL55_06885	PWY-6654	phosphopantothenate biosynthesis III
AVL55_06915	PWY-2941	L-lysine biosynthesis II
AVL55_06915	PWY-2942	L-lysine biosynthesis III
AVL55_06915	PWY-5097	L-lysine biosynthesis VI
AVL55_06915	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AVL55_06915	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AVL55_06915	PWY-6559	spermidine biosynthesis II
AVL55_06915	PWY-6562	norspermidine biosynthesis
AVL55_06915	PWY-7153	grixazone biosynthesis
AVL55_06915	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AVL55_06915	PWY-7977	AVL55_06915
AVL55_07040	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AVL55_07055	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AVL55_07080	PWY-6164	3-dehydroquinate biosynthesis I
AVL55_07125	PWY-6823	molybdenum cofactor biosynthesis
AVL55_07155	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AVL55_07225	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AVL55_07225	PWY-6148	tetrahydromethanopterin biosynthesis
AVL55_07225	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AVL55_07225	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AVL55_07280	PWY-5958	acridone alkaloid biosynthesis
AVL55_07280	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AVL55_07280	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AVL55_07285	PWY-5958	acridone alkaloid biosynthesis
AVL55_07285	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AVL55_07285	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AVL55_07355	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AVL55_07355	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AVL55_07355	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AVL55_07435	PWY-5108	L-isoleucine biosynthesis V
AVL55_07435	PWY-5132	humulone biosynthesis
AVL55_07435	PWY-5133	cohumulone biosynthesis
AVL55_07435	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AVL55_07435	PWY-7118	chitin degradation to ethanol
AVL55_07435	PWY-7857	AVL55_07435
AVL55_07445	PWY-2941	L-lysine biosynthesis II
AVL55_07445	PWY-2942	L-lysine biosynthesis III
AVL55_07445	PWY-5097	L-lysine biosynthesis VI
AVL55_07450	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AVL55_07450	PWY-5686	UMP biosynthesis
AVL55_07450	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AVL55_07450	PWY-7790	AVL55_07450
AVL55_07450	PWY-7791	AVL55_07450
AVL55_07455	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AVL55_07455	PWY-5686	UMP biosynthesis
AVL55_07455	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AVL55_07455	PWY-7790	AVL55_07455
AVL55_07455	PWY-7791	AVL55_07455
AVL55_07485	PWY-5482	pyruvate fermentation to acetate II
AVL55_07485	PWY-5485	pyruvate fermentation to acetate IV
AVL55_07485	PWY-5497	purine nucleobases degradation II (anaerobic)
AVL55_07490	PWY-1281	sulfoacetaldehyde degradation I
AVL55_07490	PWY-5482	pyruvate fermentation to acetate II
AVL55_07490	PWY-5485	pyruvate fermentation to acetate IV
AVL55_07490	PWY-5497	purine nucleobases degradation II (anaerobic)
AVL55_07490	PWY-6637	sulfolactate degradation II
AVL55_07600	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AVL55_07630	PWY-7560	methylerythritol phosphate pathway II
AVL55_07640	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AVL55_07665	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AVL55_07665	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AVL55_07735	PWY-2723	trehalose degradation V
AVL55_07735	PWY-3801	sucrose degradation II (sucrose synthase)
AVL55_07735	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AVL55_07735	PWY-5661	GDP-glucose biosynthesis
AVL55_07735	PWY-5940	streptomycin biosynthesis
AVL55_07735	PWY-5941	glycogen degradation II (eukaryotic)
AVL55_07735	PWY-622	starch biosynthesis
AVL55_07735	PWY-6317	galactose degradation I (Leloir pathway)
AVL55_07735	PWY-6731	starch degradation III
AVL55_07735	PWY-6737	starch degradation V
AVL55_07735	PWY-6749	CMP-legionaminate biosynthesis I
AVL55_07735	PWY-6981	chitin biosynthesis
AVL55_07735	PWY-7238	sucrose biosynthesis II
AVL55_07735	PWY-7343	UDP-glucose biosynthesis
AVL55_07735	PWY-7900	AVL55_07735
AVL55_07735	PWY-7902	AVL55_07735
AVL55_07740	PWY-5941	glycogen degradation II (eukaryotic)
AVL55_07740	PWY-6731	starch degradation III
AVL55_07740	PWY-6737	starch degradation V
AVL55_07740	PWY-7238	sucrose biosynthesis II
AVL55_07930	PWY-5497	purine nucleobases degradation II (anaerobic)
AVL55_07930	PWY-6606	guanosine nucleotides degradation II
AVL55_07930	PWY-6608	guanosine nucleotides degradation III
AVL55_07930	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AVL55_07935	PWY-5691	urate degradation to allantoin I
AVL55_07935	PWY-7394	urate degradation to allantoin II
AVL55_07935	PWY-7849	AVL55_07935
AVL55_07940	PWY-5691	urate degradation to allantoin I
AVL55_07940	PWY-7394	urate degradation to allantoin II
AVL55_07940	PWY-7849	AVL55_07940
AVL55_07950	PWY-5497	purine nucleobases degradation II (anaerobic)
AVL55_07950	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AVL55_07950	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AVL55_07950	PWY-6596	adenosine nucleotides degradation I
AVL55_07950	PWY-6606	guanosine nucleotides degradation II
AVL55_07950	PWY-6607	guanosine nucleotides degradation I
AVL55_07950	PWY-6608	guanosine nucleotides degradation III
AVL55_07950	PWY-6999	theophylline degradation
AVL55_07955	PWY-5497	purine nucleobases degradation II (anaerobic)
AVL55_07955	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AVL55_07955	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AVL55_07955	PWY-6596	adenosine nucleotides degradation I
AVL55_07955	PWY-6606	guanosine nucleotides degradation II
AVL55_07955	PWY-6607	guanosine nucleotides degradation I
AVL55_07955	PWY-6608	guanosine nucleotides degradation III
AVL55_07955	PWY-6999	theophylline degradation
AVL55_07980	PWY-6610	adenine and adenosine salvage IV
AVL55_08025	PWY-5692	allantoin degradation to glyoxylate II
AVL55_08025	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AVL55_08035	PWY-6832	2-aminoethylphosphonate degradation II
AVL55_08050	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AVL55_08110	PWY-5659	GDP-mannose biosynthesis
AVL55_08110	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AVL55_08115	PWY-6655	xanthan biosynthesis
AVL55_08115	PWY-6658	acetan biosynthesis
AVL55_08195	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AVL55_08195	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AVL55_08195	PWY-7953	AVL55_08195
AVL55_08285	PWY-6902	chitin degradation II
AVL55_08285	PWY-7822	AVL55_08285
AVL55_08285	PWY-7883	AVL55_08285
AVL55_08375	PWY-622	starch biosynthesis
AVL55_08375	PWY-7902	AVL55_08375
AVL55_08410	PWY-4381	fatty acid biosynthesis initiation I
AVL55_08410	PWY-5743	3-hydroxypropanoate cycle
AVL55_08410	PWY-5744	glyoxylate assimilation
AVL55_08410	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AVL55_08410	PWY-6722	candicidin biosynthesis
AVL55_08435	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AVL55_08435	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AVL55_08470	PWY-4702	phytate degradation I
AVL55_08670	PWY-4381	fatty acid biosynthesis initiation I
AVL55_08675	PWY-4381	fatty acid biosynthesis initiation I
AVL55_08675	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AVL55_08675	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AVL55_08680	PWY-5367	petroselinate biosynthesis
AVL55_08680	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AVL55_08680	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AVL55_08680	PWY-5989	stearate biosynthesis II (bacteria and plants)
AVL55_08680	PWY-5994	palmitate biosynthesis I (animals and fungi)
AVL55_08680	PWY-6113	superpathway of mycolate biosynthesis
AVL55_08680	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AVL55_08680	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AVL55_08680	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AVL55_08680	PWY-7663	gondoate biosynthesis (anaerobic)
AVL55_08680	PWY-7664	oleate biosynthesis IV (anaerobic)
AVL55_08680	PWY-7858	AVL55_08680
AVL55_08680	PWYG-321	mycolate biosynthesis
AVL55_08695	PWY-6543	4-aminobenzoate biosynthesis
AVL55_08705	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AVL55_08705	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AVL55_08705	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AVL55_08705	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AVL55_08705	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AVL55_08705	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AVL55_08720	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AVL55_08720	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AVL55_08765	PWY-1361	benzoyl-CoA degradation I (aerobic)
AVL55_08765	PWY-5109	2-methylbutanoate biosynthesis
AVL55_08765	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AVL55_08765	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AVL55_08765	PWY-5177	glutaryl-CoA degradation
AVL55_08765	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AVL55_08765	PWY-6435	4-hydroxybenzoate biosynthesis V
AVL55_08765	PWY-6583	pyruvate fermentation to butanol I
AVL55_08765	PWY-6863	pyruvate fermentation to hexanol
AVL55_08765	PWY-6883	pyruvate fermentation to butanol II
AVL55_08765	PWY-6944	androstenedione degradation
AVL55_08765	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AVL55_08765	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AVL55_08765	PWY-7007	methyl ketone biosynthesis
AVL55_08765	PWY-7046	4-coumarate degradation (anaerobic)
AVL55_08765	PWY-7094	fatty acid salvage
AVL55_08765	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AVL55_08765	PWY-735	jasmonic acid biosynthesis
AVL55_08765	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AVL55_08765	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AVL55_08765	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AVL55_08765	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AVL55_08765	PWY-7726	AVL55_08765
AVL55_08765	PWY-7778	AVL55_08765
AVL55_08765	PWY-7779	AVL55_08765
AVL55_08825	PWY-7158	L-phenylalanine degradation V
AVL55_09045	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_09045	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_09085	PWY-6123	inosine-5'-phosphate biosynthesis I
AVL55_09085	PWY-6124	inosine-5'-phosphate biosynthesis II
AVL55_09085	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AVL55_09085	PWY-7234	inosine-5'-phosphate biosynthesis III
AVL55_09095	PWY-7887	AVL55_09095
AVL55_09095	PWY-7892	AVL55_09095
AVL55_09105	PWY-5913	TCA cycle VI (obligate autotrophs)
AVL55_09105	PWY-6549	L-glutamine biosynthesis III
AVL55_09105	PWY-6728	methylaspartate cycle
AVL55_09105	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_09105	PWY-7124	ethylene biosynthesis V (engineered)
AVL55_09105	PWY-7254	TCA cycle VII (acetate-producers)
AVL55_09105	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AVL55_09130	PWY-7802	AVL55_09130
AVL55_09135	PWY-7801	AVL55_09135
AVL55_09185	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AVL55_09185	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AVL55_09190	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AVL55_09190	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AVL55_09200	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AVL55_09200	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AVL55_09210	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AVL55_09210	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AVL55_09210	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AVL55_09210	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AVL55_09230	PWY-5381	pyridine nucleotide cycling (plants)
AVL55_09230	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AVL55_09230	PWY-7761	AVL55_09230
AVL55_09290	PWY-6614	tetrahydrofolate biosynthesis
AVL55_09295	PWY-6749	CMP-legionaminate biosynthesis I
AVL55_09300	PWY-1042	glycolysis IV (plant cytosol)
AVL55_09300	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_09300	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_09300	PWY-7003	glycerol degradation to butanol
AVL55_09365	PWY-3341	L-proline biosynthesis III
AVL55_09365	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AVL55_09370	PWY-3341	L-proline biosynthesis III
AVL55_09370	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AVL55_09450	PWY-6556	pyrimidine ribonucleosides salvage II
AVL55_09450	PWY-7181	pyrimidine deoxyribonucleosides degradation
AVL55_09450	PWY-7193	pyrimidine ribonucleosides salvage I
AVL55_09450	PWY-7199	pyrimidine deoxyribonucleosides salvage
AVL55_09515	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AVL55_09560	PWY-6749	CMP-legionaminate biosynthesis I
AVL55_09590	PWY-3781	aerobic respiration I (cytochrome c)
AVL55_09590	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AVL55_09590	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AVL55_09590	PWY-5690	TCA cycle II (plants and fungi)
AVL55_09590	PWY-6728	methylaspartate cycle
AVL55_09590	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_09590	PWY-7254	TCA cycle VII (acetate-producers)
AVL55_09590	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AVL55_09595	PWY-3781	aerobic respiration I (cytochrome c)
AVL55_09595	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AVL55_09595	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AVL55_09595	PWY-5690	TCA cycle II (plants and fungi)
AVL55_09595	PWY-6728	methylaspartate cycle
AVL55_09595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_09595	PWY-7254	TCA cycle VII (acetate-producers)
AVL55_09595	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AVL55_09600	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AVL55_09605	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AVL55_09610	PWY-5392	reductive TCA cycle II
AVL55_09610	PWY-5537	pyruvate fermentation to acetate V
AVL55_09610	PWY-5538	pyruvate fermentation to acetate VI
AVL55_09610	PWY-5690	TCA cycle II (plants and fungi)
AVL55_09610	PWY-5913	TCA cycle VI (obligate autotrophs)
AVL55_09610	PWY-6728	methylaspartate cycle
AVL55_09610	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_09610	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AVL55_09615	PWY-5392	reductive TCA cycle II
AVL55_09615	PWY-5537	pyruvate fermentation to acetate V
AVL55_09615	PWY-5538	pyruvate fermentation to acetate VI
AVL55_09615	PWY-5690	TCA cycle II (plants and fungi)
AVL55_09615	PWY-5913	TCA cycle VI (obligate autotrophs)
AVL55_09615	PWY-6728	methylaspartate cycle
AVL55_09615	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_09615	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AVL55_09820	PWY-1042	glycolysis IV (plant cytosol)
AVL55_09820	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AVL55_09820	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_09820	PWY-7385	1,3-propanediol biosynthesis (engineered)
AVL55_09995	PWY-5958	acridone alkaloid biosynthesis
AVL55_09995	PWY-6543	4-aminobenzoate biosynthesis
AVL55_09995	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AVL55_09995	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AVL55_10000	PWY-5392	reductive TCA cycle II
AVL55_10000	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AVL55_10000	PWY-5690	TCA cycle II (plants and fungi)
AVL55_10000	PWY-5913	TCA cycle VI (obligate autotrophs)
AVL55_10000	PWY-6728	methylaspartate cycle
AVL55_10000	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_10000	PWY-7254	TCA cycle VII (acetate-producers)
AVL55_10000	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AVL55_10050	PWY-6832	2-aminoethylphosphonate degradation II
AVL55_10120	PWY-5022	4-aminobutanoate degradation V
AVL55_10120	PWY-6728	methylaspartate cycle
AVL55_10120	PWY-7126	ethylene biosynthesis IV
AVL55_10125	PWY-5686	UMP biosynthesis
AVL55_10155	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AVL55_10155	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AVL55_10155	PWY-5989	stearate biosynthesis II (bacteria and plants)
AVL55_10155	PWY-5994	palmitate biosynthesis I (animals and fungi)
AVL55_10155	PWY-6113	superpathway of mycolate biosynthesis
AVL55_10155	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AVL55_10155	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AVL55_10155	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AVL55_10155	PWY-7663	gondoate biosynthesis (anaerobic)
AVL55_10155	PWY-7664	oleate biosynthesis IV (anaerobic)
AVL55_10155	PWY-7858	AVL55_10155
AVL55_10155	PWYG-321	mycolate biosynthesis
AVL55_10695	PWY-7039	phosphatidate metabolism, as a signaling molecule
AVL55_10695	PWY-7817	AVL55_10695
AVL55_10735	PWY-3781	aerobic respiration I (cytochrome c)
AVL55_10735	PWY-4521	arsenite oxidation I (respiratory)
AVL55_10735	PWY-6692	Fe(II) oxidation
AVL55_10735	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AVL55_10820	PWY-5350	thiosulfate disproportionation III (rhodanese)
AVL55_10820	PWY-7927	AVL55_10820
AVL55_10850	PWY-5269	cardiolipin biosynthesis II
AVL55_10850	PWY-5668	cardiolipin biosynthesis I
AVL55_10850	PWY-7817	AVL55_10850
AVL55_10955	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AVL55_10990	PWY-5686	UMP biosynthesis
AVL55_10990	PWY-7790	AVL55_10990
AVL55_10990	PWY-7791	AVL55_10990
AVL55_11020	PWY-7205	CMP phosphorylation
AVL55_11025	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AVL55_11040	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AVL55_11040	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AVL55_11040	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AVL55_11040	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AVL55_11040	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AVL55_11040	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AVL55_11040	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AVL55_11040	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AVL55_11040	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AVL55_11040	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AVL55_11045	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AVL55_11045	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AVL55_11045	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AVL55_11045	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AVL55_11045	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AVL55_11045	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AVL55_11045	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AVL55_11045	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AVL55_11055	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AVL55_11055	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AVL55_11055	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AVL55_11055	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AVL55_11055	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AVL55_11055	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AVL55_11055	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AVL55_11055	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AVL55_11230	PWY-6123	inosine-5'-phosphate biosynthesis I
AVL55_11230	PWY-6124	inosine-5'-phosphate biosynthesis II
AVL55_11230	PWY-7234	inosine-5'-phosphate biosynthesis III
AVL55_11240	PWY-2941	L-lysine biosynthesis II
AVL55_11240	PWY-2942	L-lysine biosynthesis III
AVL55_11240	PWY-5097	L-lysine biosynthesis VI
AVL55_11270	PWY-4202	arsenate detoxification I (glutaredoxin)
AVL55_11270	PWY-4621	arsenate detoxification II (glutaredoxin)
AVL55_11275	PWY-7731	AVL55_11275
AVL55_11300	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AVL55_11300	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AVL55_11300	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AVL55_11305	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AVL55_11305	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AVL55_11315	PWY-7094	fatty acid salvage
AVL55_11315	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AVL55_11345	PWY-5656	mannosylglycerate biosynthesis I
AVL55_11360	PWY-181	photorespiration
AVL55_11365	PWY-6823	molybdenum cofactor biosynthesis
AVL55_11390	PWY-6936	seleno-amino acid biosynthesis
AVL55_11550	PWY-4041	&gamma;-glutamyl cycle
AVL55_11550	PWY-7942	AVL55_11550
AVL55_11555	PWY-4041	&gamma;-glutamyl cycle
AVL55_11555	PWY-7942	AVL55_11555
AVL55_11675	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AVL55_11695	PWY-6823	molybdenum cofactor biosynthesis
AVL55_11695	PWY-7887	AVL55_11695
AVL55_11705	PWY-6823	molybdenum cofactor biosynthesis
AVL55_11790	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AVL55_11790	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AVL55_11790	PWY-6936	seleno-amino acid biosynthesis
AVL55_11790	PWY-702	L-methionine biosynthesis II
AVL55_12100	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AVL55_12100	PWY-622	starch biosynthesis
AVL55_12100	PWY-7900	AVL55_12100
AVL55_12105	PWY-5941	glycogen degradation II (eukaryotic)
AVL55_12105	PWY-6724	starch degradation II
AVL55_12105	PWY-6737	starch degradation V
AVL55_12105	PWY-7238	sucrose biosynthesis II
AVL55_12110	PWY-1042	glycolysis IV (plant cytosol)
AVL55_12110	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_12110	PWY-6901	superpathway of glucose and xylose degradation
AVL55_12110	PWY-7003	glycerol degradation to butanol
AVL55_12120	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AVL55_12120	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AVL55_12120	PWY-7242	D-fructuronate degradation
AVL55_12120	PWY-7310	D-glucosaminate degradation
AVL55_12120	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AVL55_12125	PWY-2722	trehalose degradation IV
AVL55_12125	PWY-2723	trehalose degradation V
AVL55_12125	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AVL55_12125	PWY-5661	GDP-glucose biosynthesis
AVL55_12125	PWY-621	sucrose degradation III (sucrose invertase)
AVL55_12125	PWY-7238	sucrose biosynthesis II
AVL55_12125	PWY-7385	1,3-propanediol biosynthesis (engineered)
AVL55_12130	PWY-5101	L-isoleucine biosynthesis II
AVL55_12130	PWY-5103	L-isoleucine biosynthesis III
AVL55_12130	PWY-5104	L-isoleucine biosynthesis IV
AVL55_12130	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AVL55_12135	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AVL55_12135	PWY-6855	chitin degradation I (archaea)
AVL55_12135	PWY-6906	chitin derivatives degradation
AVL55_12140	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AVL55_12150	PWY-1042	glycolysis IV (plant cytosol)
AVL55_12150	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AVL55_12150	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_12150	PWY-5723	Rubisco shunt
AVL55_12150	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_12150	PWY-6886	1-butanol autotrophic biosynthesis
AVL55_12150	PWY-6901	superpathway of glucose and xylose degradation
AVL55_12150	PWY-7003	glycerol degradation to butanol
AVL55_12150	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AVL55_12150	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AVL55_12345	PWY-7884	AVL55_12345
AVL55_12445	PWY-5386	methylglyoxal degradation I
AVL55_12475	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AVL55_12475	PWY-5491	diethylphosphate degradation
AVL55_12480	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AVL55_12480	PWY-5491	diethylphosphate degradation
AVL55_12530	PWY-6012	acyl carrier protein metabolism I
AVL55_12545	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AVL55_12545	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AVL55_12545	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AVL55_12545	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AVL55_12560	PWY-2161	folate polyglutamylation
AVL55_12565	PWY-4381	fatty acid biosynthesis initiation I
AVL55_12565	PWY-5743	3-hydroxypropanoate cycle
AVL55_12565	PWY-5744	glyoxylate assimilation
AVL55_12565	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AVL55_12565	PWY-6722	candicidin biosynthesis
AVL55_12585	PWY-2941	L-lysine biosynthesis II
AVL55_12585	PWY-2942	L-lysine biosynthesis III
AVL55_12585	PWY-5097	L-lysine biosynthesis VI
AVL55_12585	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AVL55_12585	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AVL55_12585	PWY-6559	spermidine biosynthesis II
AVL55_12585	PWY-6562	norspermidine biosynthesis
AVL55_12585	PWY-7153	grixazone biosynthesis
AVL55_12585	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AVL55_12585	PWY-7977	AVL55_12585
AVL55_12655	PWY-7892	AVL55_12655
AVL55_12760	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AVL55_12760	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AVL55_12760	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AVL55_12805	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AVL55_12805	PWY-7494	choline degradation IV
AVL55_12950	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AVL55_12975	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AVL55_12975	PWY-622	starch biosynthesis
AVL55_12975	PWY-7900	AVL55_12975
AVL55_13080	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AVL55_13120	PWY-6605	adenine and adenosine salvage II
AVL55_13120	PWY-6610	adenine and adenosine salvage IV
AVL55_13120	PWY-7805	AVL55_13120
AVL55_13120	PWY-7807	AVL55_13120
AVL55_13195	PWY-5669	phosphatidylethanolamine biosynthesis I
AVL55_13215	PWY-5386	methylglyoxal degradation I
AVL55_13215	PWY-7425	2-chloroacrylate degradation I
AVL55_13320	PWY-6891	thiazole biosynthesis II (Bacillus)
AVL55_13320	PWY-6892	thiazole biosynthesis I (E. coli)
AVL55_13320	PWY-7560	methylerythritol phosphate pathway II
AVL55_13325	PWY-5269	cardiolipin biosynthesis II
AVL55_13325	PWY-5668	cardiolipin biosynthesis I
AVL55_13325	PWY-7817	AVL55_13325
AVL55_13330	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AVL55_13330	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AVL55_13330	PWY-6896	thiamin salvage I
AVL55_13330	PWY-6897	thiamin salvage II
AVL55_13340	PWY-6167	flavin biosynthesis II (archaea)
AVL55_13340	PWY-6168	flavin biosynthesis III (fungi)
AVL55_13345	PWY-6167	flavin biosynthesis II (archaea)
AVL55_13345	PWY-6168	flavin biosynthesis III (fungi)
AVL55_13345	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AVL55_13345	PWY-7991	AVL55_13345
AVL55_13350	PWY-6167	flavin biosynthesis II (archaea)
AVL55_13350	PWY-6168	flavin biosynthesis III (fungi)
AVL55_13350	PWY-7980	AVL55_13350
AVL55_13355	PWY-7991	AVL55_13355
AVL55_13365	PWY-1622	formaldehyde assimilation I (serine pathway)
AVL55_13365	PWY-181	photorespiration
AVL55_13365	PWY-2161	folate polyglutamylation
AVL55_13365	PWY-2201	folate transformations I
AVL55_13365	PWY-3661	glycine betaine degradation I
AVL55_13365	PWY-3661-1	glycine betaine degradation II (mammalian)
AVL55_13365	PWY-3841	folate transformations II
AVL55_13365	PWY-5497	purine nucleobases degradation II (anaerobic)
AVL55_13410	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AVL55_13410	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AVL55_13455	PWY-5316	nicotine biosynthesis
AVL55_13455	PWY-7342	superpathway of nicotine biosynthesis
AVL55_13550	PWY-7560	methylerythritol phosphate pathway II
AVL55_13560	PWY-7884	AVL55_13560
AVL55_13570	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AVL55_13570	PWY-6167	flavin biosynthesis II (archaea)
AVL55_13570	PWY-6168	flavin biosynthesis III (fungi)
AVL55_13570	PWY-7863	AVL55_13570
AVL55_13685	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AVL55_13685	PWY-2201	folate transformations I
AVL55_13685	PWY-3841	folate transformations II
AVL55_13685	PWY-5030	L-histidine degradation III
AVL55_13685	PWY-5497	purine nucleobases degradation II (anaerobic)
AVL55_13685	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AVL55_13685	PWY-7909	AVL55_13685
AVL55_13710	PWY-6803	phosphatidylcholine acyl editing
AVL55_13710	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AVL55_13710	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AVL55_13710	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AVL55_13710	PWY-7783	AVL55_13710
AVL55_13725	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AVL55_13730	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AVL55_13730	PWY-6596	adenosine nucleotides degradation I
AVL55_13730	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AVL55_13790	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AVL55_13790	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AVL55_13790	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AVL55_13790	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AVL55_13790	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AVL55_13790	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AVL55_13790	PWY-7205	CMP phosphorylation
AVL55_13790	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AVL55_13790	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AVL55_13790	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AVL55_13790	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AVL55_13790	PWY-7224	purine deoxyribonucleosides salvage
AVL55_13790	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AVL55_13790	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AVL55_13810	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AVL55_13830	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AVL55_13845	PWY-6936	seleno-amino acid biosynthesis
AVL55_13845	PWY-7274	D-cycloserine biosynthesis
AVL55_13845	PWY-7870	AVL55_13845
AVL55_13855	PWY-2301	<i>myo</i>-inositol biosynthesis
AVL55_13855	PWY-4702	phytate degradation I
AVL55_13855	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AVL55_13875	PWY-6700	queuosine biosynthesis
AVL55_13880	PWY-6700	queuosine biosynthesis
AVL55_13955	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AVL55_13955	PWY-5491	diethylphosphate degradation
AVL55_13965	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_13975	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_13975	PWY-7118	chitin degradation to ethanol
AVL55_13975	PWY-7294	xylose degradation IV
AVL55_13975	PWY-7295	L-arabinose degradation IV
AVL55_13975	PWY-7854	AVL55_13975
AVL55_14015	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AVL55_14015	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AVL55_14015	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AVL55_14050	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AVL55_14050	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AVL55_14050	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AVL55_14200	PWY-7094	fatty acid salvage
AVL55_14200	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AVL55_14230	PWY-6420	pyrroloquinoline quinone biosynthesis
AVL55_14295	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AVL55_14380	PWY-5530	sorbitol biosynthesis II
AVL55_14435	PWY-7199	pyrimidine deoxyribonucleosides salvage
AVL55_14450	PWY-7183	pyrimidine nucleobases salvage I
AVL55_14525	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AVL55_14525	PWY-7494	choline degradation IV
AVL55_14615	PWY-5386	methylglyoxal degradation I
AVL55_14710	PWY-6609	adenine and adenosine salvage III
AVL55_14710	PWY-6611	adenine and adenosine salvage V
AVL55_14710	PWY-7179	purine deoxyribonucleosides degradation I
AVL55_14710	PWY-7179-1	purine deoxyribonucleosides degradation
AVL55_14910	PWY-5704	urea degradation II
AVL55_14915	PWY-5704	urea degradation II
AVL55_14920	PWY-5704	urea degradation II
AVL55_15025	PWY-7799	AVL55_15025
AVL55_15025	PWY-7800	AVL55_15025
AVL55_15065	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AVL55_15065	PWY-5723	Rubisco shunt
AVL55_15115	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AVL55_15115	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AVL55_15125	PWY-6891	thiazole biosynthesis II (Bacillus)
AVL55_15125	PWY-6892	thiazole biosynthesis I (E. coli)
AVL55_15125	PWY-7560	methylerythritol phosphate pathway II
AVL55_15150	PWY-5316	nicotine biosynthesis
AVL55_15150	PWY-5381	pyridine nucleotide cycling (plants)
AVL55_15150	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AVL55_15150	PWY-7342	superpathway of nicotine biosynthesis
AVL55_15170	PWY-7851	AVL55_15170
AVL55_15190	PWY-6502	oxidized GTP and dGTP detoxification
AVL55_15225	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AVL55_15225	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AVL55_15225	PWY-7953	AVL55_15225
AVL55_15230	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AVL55_15230	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AVL55_15230	PWY-7953	AVL55_15230
AVL55_15235	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AVL55_15235	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AVL55_15235	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AVL55_15235	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AVL55_15240	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AVL55_15240	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AVL55_15240	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AVL55_15240	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AVL55_15245	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AVL55_15245	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AVL55_15250	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AVL55_15250	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AVL55_15250	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AVL55_15255	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AVL55_15255	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AVL55_15255	PWY-7953	AVL55_15255
AVL55_15265	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AVL55_15265	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AVL55_15295	PWY-7533	gliotoxin biosynthesis
AVL55_15360	PWY-4381	fatty acid biosynthesis initiation I
AVL55_15415	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AVL55_15420	PWY-3341	L-proline biosynthesis III
AVL55_15420	PWY-4981	L-proline biosynthesis II (from arginine)
AVL55_15420	PWY-6344	L-ornithine degradation II (Stickland reaction)
AVL55_15455	PWY-6854	ethylene biosynthesis III (microbes)
AVL55_15505	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AVL55_15505	PWY-5723	Rubisco shunt
AVL55_15510	PWY-3801	sucrose degradation II (sucrose synthase)
AVL55_15510	PWY-5054	sorbitol biosynthesis I
AVL55_15510	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AVL55_15510	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AVL55_15510	PWY-5659	GDP-mannose biosynthesis
AVL55_15510	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_15510	PWY-621	sucrose degradation III (sucrose invertase)
AVL55_15510	PWY-622	starch biosynthesis
AVL55_15510	PWY-6981	chitin biosynthesis
AVL55_15510	PWY-6992	1,5-anhydrofructose degradation
AVL55_15510	PWY-7238	sucrose biosynthesis II
AVL55_15510	PWY-7347	sucrose biosynthesis III
AVL55_15510	PWY-7385	1,3-propanediol biosynthesis (engineered)
AVL55_15525	PWY-702	L-methionine biosynthesis II
AVL55_15530	PWY-2941	L-lysine biosynthesis II
AVL55_15530	PWY-2942	L-lysine biosynthesis III
AVL55_15530	PWY-5097	L-lysine biosynthesis VI
AVL55_15530	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AVL55_15530	PWY-6559	spermidine biosynthesis II
AVL55_15530	PWY-6562	norspermidine biosynthesis
AVL55_15530	PWY-7153	grixazone biosynthesis
AVL55_15530	PWY-7977	AVL55_15530
AVL55_15545	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AVL55_15545	PWY-3162	L-tryptophan degradation V (side chain pathway)
AVL55_15545	PWY-5057	L-valine degradation II
AVL55_15545	PWY-5076	L-leucine degradation III
AVL55_15545	PWY-5078	L-isoleucine degradation II
AVL55_15545	PWY-5079	L-phenylalanine degradation III
AVL55_15545	PWY-5082	L-methionine degradation III
AVL55_15545	PWY-5480	pyruvate fermentation to ethanol I
AVL55_15545	PWY-5486	pyruvate fermentation to ethanol II
AVL55_15545	PWY-5751	phenylethanol biosynthesis
AVL55_15545	PWY-6313	serotonin degradation
AVL55_15545	PWY-6333	acetaldehyde biosynthesis I
AVL55_15545	PWY-6342	noradrenaline and adrenaline degradation
AVL55_15545	PWY-6587	pyruvate fermentation to ethanol III
AVL55_15545	PWY-6802	salidroside biosynthesis
AVL55_15545	PWY-6871	3-methylbutanol biosynthesis
AVL55_15545	PWY-7013	L-1,2-propanediol degradation
AVL55_15545	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AVL55_15545	PWY-7118	chitin degradation to ethanol
AVL55_15545	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AVL55_15545	PWY-7798	AVL55_15545
AVL55_15605	PWY-2002	isoflavonoid biosynthesis I
AVL55_15605	PWY-5059	pinobanksin biosynthesis
AVL55_15605	PWY-6325	echinatin biosynthesis
AVL55_15605	PWY-6787	flavonoid biosynthesis (in equisetum)
AVL55_15605	PWY-7397	naringenin biosynthesis (engineered)
AVL55_15605	PWY-7897	AVL55_15605
AVL55_15645	PWY-6562	norspermidine biosynthesis
AVL55_15680	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AVL55_15735	PWY-5747	2-methylcitrate cycle II
AVL55_15805	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AVL55_15805	PWY-6153	autoinducer AI-2 biosynthesis I
AVL55_15805	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AVL55_15865	PWY-7883	AVL55_15865
AVL55_15935	PWY-5392	reductive TCA cycle II
AVL55_15935	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AVL55_15935	PWY-5690	TCA cycle II (plants and fungi)
AVL55_15935	PWY-5913	TCA cycle VI (obligate autotrophs)
AVL55_15935	PWY-6728	methylaspartate cycle
AVL55_15935	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_15935	PWY-7254	TCA cycle VII (acetate-producers)
AVL55_15935	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AVL55_16000	PWY-381	nitrate reduction II (assimilatory)
AVL55_16000	PWY-5675	nitrate reduction V (assimilatory)
AVL55_16000	PWY-6549	L-glutamine biosynthesis III
AVL55_16000	PWY-6963	ammonia assimilation cycle I
AVL55_16000	PWY-6964	ammonia assimilation cycle II
AVL55_16025	PWY-5667	CDP-diacylglycerol biosynthesis I
AVL55_16025	PWY-5981	CDP-diacylglycerol biosynthesis III
AVL55_16025	PWY-6453	stigma estolide biosynthesis
AVL55_16025	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AVL55_16025	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AVL55_16025	PWY-7587	oleate biosynthesis III (cyanobacteria)
AVL55_16025	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AVL55_16025	PWY-7782	AVL55_16025
AVL55_16285	PWY-1042	glycolysis IV (plant cytosol)
AVL55_16285	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AVL55_16285	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_16285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_16285	PWY-7385	1,3-propanediol biosynthesis (engineered)
AVL55_16330	PWY-1042	glycolysis IV (plant cytosol)
AVL55_16330	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_16330	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_16330	PWY-7003	glycerol degradation to butanol
AVL55_16335	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_16340	PWY-5484	glycolysis II (from fructose 6-phosphate)
AVL55_16345	PWY-4261	glycerol degradation I
AVL55_16345	PWY-6118	glycerol-3-phosphate shuttle
AVL55_16345	PWY-6952	glycerophosphodiester degradation
AVL55_16350	PWY-4261	glycerol degradation I
AVL55_16445	PWY-5642	2,4-dinitrotoluene degradation
AVL55_16490	PWY-5386	methylglyoxal degradation I
AVL55_16490	PWY-7425	2-chloroacrylate degradation I
AVL55_16575	PWY-3781	aerobic respiration I (cytochrome c)
AVL55_16575	PWY-4521	arsenite oxidation I (respiratory)
AVL55_16575	PWY-6692	Fe(II) oxidation
AVL55_16575	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AVL55_16605	PWY-5506	methanol oxidation to formaldehyde IV
AVL55_16715	PWY-5987	sorgoleone biosynthesis
AVL55_16715	PWY-5996	oleate biosynthesis II (animals and fungi)
AVL55_16720	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AVL55_16750	PWY-6683	sulfate reduction III (assimilatory)
AVL55_16755	PWY-6683	sulfate reduction III (assimilatory)
AVL55_16825	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AVL55_17005	PWY-5530	sorbitol biosynthesis II
AVL55_17005	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AVL55_17075	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AVL55_17075	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AVL55_17075	PWY-5989	stearate biosynthesis II (bacteria and plants)
AVL55_17075	PWY-6113	superpathway of mycolate biosynthesis
AVL55_17075	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AVL55_17075	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AVL55_17075	PWY-7663	gondoate biosynthesis (anaerobic)
AVL55_17075	PWY-7664	oleate biosynthesis IV (anaerobic)
AVL55_17075	PWY-7858	AVL55_17075
AVL55_17075	PWYG-321	mycolate biosynthesis
AVL55_17085	PWY-1622	formaldehyde assimilation I (serine pathway)
AVL55_17085	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AVL55_17085	PWY-5913	TCA cycle VI (obligate autotrophs)
AVL55_17085	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AVL55_17085	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AVL55_17085	PWY-6549	L-glutamine biosynthesis III
AVL55_17085	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AVL55_17085	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AVL55_17085	PWY-7124	ethylene biosynthesis V (engineered)
AVL55_17090	PWY-1622	formaldehyde assimilation I (serine pathway)
AVL55_17090	PWY-5392	reductive TCA cycle II
AVL55_17090	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AVL55_17090	PWY-5690	TCA cycle II (plants and fungi)
AVL55_17090	PWY-5913	TCA cycle VI (obligate autotrophs)
AVL55_17090	PWY-6728	methylaspartate cycle
AVL55_17090	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AVL55_17090	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AVL55_17090	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AVL55_17125	PWY-7193	pyrimidine ribonucleosides salvage I
AVL55_17215	PWY-5108	L-isoleucine biosynthesis V
AVL55_17215	PWY-5132	humulone biosynthesis
AVL55_17215	PWY-5133	cohumulone biosynthesis
AVL55_17215	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AVL55_17215	PWY-7118	chitin degradation to ethanol
AVL55_17215	PWY-7857	AVL55_17215
AVL55_17255	PWY-5659	GDP-mannose biosynthesis
AVL55_17255	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AVL55_17265	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AVL55_17265	PWY-7820	AVL55_17265
AVL55_17275	PWY-3221	dTDP-L-rhamnose biosynthesis II
AVL55_17275	PWY-6808	dTDP-D-forosamine biosynthesis
AVL55_17275	PWY-6942	dTDP-D-desosamine biosynthesis
AVL55_17275	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AVL55_17275	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AVL55_17275	PWY-6974	dTDP-L-olivose biosynthesis
AVL55_17275	PWY-6976	dTDP-L-mycarose biosynthesis
AVL55_17275	PWY-7104	dTDP-L-megosamine biosynthesis
AVL55_17275	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AVL55_17275	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AVL55_17275	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AVL55_17275	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AVL55_17275	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AVL55_17275	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AVL55_17275	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AVL55_17275	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AVL55_17275	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AVL55_17275	PWY-7688	AVL55_17275
AVL55_17275	PWY-7814	AVL55_17275
AVL55_17290	PWY-3221	dTDP-L-rhamnose biosynthesis II
AVL55_17290	PWY-6808	dTDP-D-forosamine biosynthesis
AVL55_17290	PWY-6942	dTDP-D-desosamine biosynthesis
AVL55_17290	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AVL55_17290	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AVL55_17290	PWY-6974	dTDP-L-olivose biosynthesis
AVL55_17290	PWY-6976	dTDP-L-mycarose biosynthesis
AVL55_17290	PWY-7104	dTDP-L-megosamine biosynthesis
AVL55_17290	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AVL55_17290	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AVL55_17290	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AVL55_17290	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AVL55_17290	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AVL55_17290	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AVL55_17290	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AVL55_17290	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AVL55_17290	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AVL55_17290	PWY-7688	AVL55_17290
AVL55_17290	PWY-7814	AVL55_17290
AVL55_17365	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AVL55_17630	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AVL55_17630	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AVL55_17630	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AVL55_17630	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AVL55_17630	PWY-6978	plastoquinol-9 biosynthesis II
AVL55_17695	PWY-5839	menaquinol-7 biosynthesis
AVL55_17695	PWY-5844	menaquinol-9 biosynthesis
AVL55_17695	PWY-5849	menaquinol-6 biosynthesis
AVL55_17695	PWY-5890	menaquinol-10 biosynthesis
AVL55_17695	PWY-5891	menaquinol-11 biosynthesis
AVL55_17695	PWY-5892	menaquinol-12 biosynthesis
AVL55_17695	PWY-5895	menaquinol-13 biosynthesis
AVL55_17725	PWY-4081	glutathione redox reactions I
AVL55_17785	PWY-6174	mevalonate pathway II (archaea)
AVL55_17785	PWY-7391	isoprene biosynthesis II (engineered)
AVL55_17785	PWY-7524	mevalonate pathway III (archaea)
AVL55_17785	PWY-922	mevalonate pathway I
AVL55_17875	PWY-2201	folate transformations I
AVL55_17875	PWY-3841	folate transformations II
AVL55_17990	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AVL55_17990	PWY-6148	tetrahydromethanopterin biosynthesis
AVL55_17990	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AVL55_17990	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AVL55_17990	PWY-7852	AVL55_17990
AVL55_17990	PWY-7853	AVL55_17990
AVL55_17995	PWY-6654	phosphopantothenate biosynthesis III
AVL55_18005	PWY-5155	&beta;-alanine biosynthesis III
AVL55_18175	PWY-3961	phosphopantothenate biosynthesis II
AVL55_18180	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AVL55_18180	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AVL55_18185	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AVL55_18185	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AVL55_18185	PWY-7953	AVL55_18185
AVL55_18325	PWY-5686	UMP biosynthesis
AVL55_18325	PWY-7790	AVL55_18325
AVL55_18325	PWY-7791	AVL55_18325
AVL55_18365	PWY-5663	tetrahydrobiopterin biosynthesis I
AVL55_18365	PWY-5664	tetrahydrobiopterin biosynthesis II
AVL55_18365	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AVL55_18365	PWY-6703	preQ<sub>0</sub> biosynthesis
AVL55_18365	PWY-6983	tetrahydrobiopterin biosynthesis III
AVL55_18365	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AVL55_18365	PWY-7852	AVL55_18365
AVL55_18375	PWY-43	putrescine biosynthesis II
AVL55_18455	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AVL55_18455	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AVL55_18455	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AVL55_18455	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AVL55_18455	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AVL55_18455	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AVL55_18455	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AVL55_18455	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AVL55_18455	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AVL55_18455	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AVL55_18515	PWY-2781	<i>cis</i>-zeatin biosynthesis
AVL55_18535	PWY-6938	NADH repair
AVL55_18540	PWY-6700	queuosine biosynthesis
AVL55_18550	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AVL55_18550	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AVL55_18550	PWY-7766	AVL55_18550
AVL55_18555	PWY-5381	pyridine nucleotide cycling (plants)
AVL55_18555	PWY-7761	AVL55_18555
AVL55_18715	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AVL55_18760	PWY-5663	tetrahydrobiopterin biosynthesis I
AVL55_18760	PWY-5664	tetrahydrobiopterin biosynthesis II
AVL55_18760	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AVL55_18760	PWY-6703	preQ<sub>0</sub> biosynthesis
AVL55_18760	PWY-6983	tetrahydrobiopterin biosynthesis III
AVL55_18760	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AVL55_18760	PWY-7852	AVL55_18760
AVL55_18955	PWY-6749	CMP-legionaminate biosynthesis I
AVL55_18970	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AVL55_19000	PWY-40	putrescine biosynthesis I
AVL55_19000	PWY-43	putrescine biosynthesis II
AVL55_19000	PWY-6305	putrescine biosynthesis IV
AVL55_19000	PWY-6834	spermidine biosynthesis III
AVL55_19115	PWY-3781	aerobic respiration I (cytochrome c)
AVL55_19115	PWY-4521	arsenite oxidation I (respiratory)
AVL55_19115	PWY-6692	Fe(II) oxidation
AVL55_19115	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AVL55_19115	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AVL55_19175	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AVL55_19175	PWY-6416	quinate degradation II
AVL55_19175	PWY-6707	gallate biosynthesis
AVL55_19230	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AVL55_19255	PWY-6123	inosine-5'-phosphate biosynthesis I
AVL55_19255	PWY-6124	inosine-5'-phosphate biosynthesis II
AVL55_19255	PWY-7234	inosine-5'-phosphate biosynthesis III
AVL55_19265	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AVL55_19265	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AVL55_19265	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AVL55_19275	PWY-6717	(1,4)-&beta;-xylan degradation
AVL55_19275	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AVL55_19285	PWY-5723	Rubisco shunt
AVL55_19315	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AVL55_19315	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AVL55_19430	PWY-5129	sphingolipid biosynthesis (plants)
AVL55_19430	PWY-7836	AVL55_19430
AVL55_19430	PWY-7838	AVL55_19430
AVL55_19430	PWY-7839	AVL55_19430
AVL55_19430	PWY-7841	AVL55_19430
AVL55_19520	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AVL55_19545	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AVL55_19545	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AVL55_19610	PWY-3781	aerobic respiration I (cytochrome c)
AVL55_19610	PWY-4521	arsenite oxidation I (respiratory)
AVL55_19610	PWY-6692	Fe(II) oxidation
AVL55_19610	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AVL55_19630	PWY-5667	CDP-diacylglycerol biosynthesis I
AVL55_19630	PWY-6453	stigma estolide biosynthesis
AVL55_19630	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AVL55_19630	PWY-7587	oleate biosynthesis III (cyanobacteria)
AVL55_19640	PWY-5101	L-isoleucine biosynthesis II
AVL55_19640	PWY-5103	L-isoleucine biosynthesis III
AVL55_19640	PWY-5104	L-isoleucine biosynthesis IV
AVL55_19640	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AVL55_19660	PWY-5103	L-isoleucine biosynthesis III
AVL55_19660	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AVL55_19715	PWY-3341	L-proline biosynthesis III
AVL55_19715	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AVL55_19785	PWY-5686	UMP biosynthesis
AVL55_19785	PWY-7790	AVL55_19785
AVL55_19785	PWY-7791	AVL55_19785
AVL55_19930	PWY-3121	linamarin degradation
AVL55_19930	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AVL55_19930	PWY-6002	lotaustralin degradation
AVL55_19930	PWY-6788	cellulose degradation II (fungi)
AVL55_19930	PWY-7091	linustatin bioactivation
AVL55_19930	PWY-7092	neolinustatin bioactivation
AVL55_19930	PWY-7913	AVL55_19930
AVL55_19995	PWY-7980	AVL55_19995
AVL55_20005	PWY-7980	AVL55_20005