AVL55_14900 8c2c2721e2757cf8308624e8c3f36e81 232 Pfam PF01730 UreF 44 189 2.8E-33 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AVL55_14900 8c2c2721e2757cf8308624e8c3f36e81 232 PIRSF PIRSF009467 8 232 8.8E-55 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AVL55_14900 8c2c2721e2757cf8308624e8c3f36e81 232 Hamap MF_01385 Urease accessory protein UreF [ureF]. 11 232 28.922 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AVL55_14900 8c2c2721e2757cf8308624e8c3f36e81 232 Gene3D G3DSA:1.10.4190.10 9 210 3.6E-49 T 11-10-2018 IPR038277 UreF domain superfamily AVL55_03095 c5f3d97f88bec93516a1201445aa4693 399 SUPERFAMILY SSF56935 20 399 1.19E-27 T 11-10-2018 AVL55_13795 962705fd5582cdbdacfef27b96cb65f8 136 Gene3D G3DSA:3.90.1010.10 1 136 1.5E-47 T 11-10-2018 AVL55_13795 962705fd5582cdbdacfef27b96cb65f8 136 SUPERFAMILY SSF82649 4 134 4.39E-44 T 11-10-2018 AVL55_13795 962705fd5582cdbdacfef27b96cb65f8 136 Pfam PF02657 Fe-S metabolism associated domain 11 130 5.3E-45 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 Gene3D G3DSA:3.30.70.270 319 489 2.3E-25 T 11-10-2018 AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 SUPERFAMILY SSF55073 330 477 9.42E-21 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 Pfam PF11849 Domain of unknown function (DUF3369) 153 321 2.1E-51 T 11-10-2018 IPR021800 Domain of unknown function DUF3369 AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 SMART SM00448 30 153 0.0051 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 SUPERFAMILY SSF141868 493 739 1.15E-81 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 Pfam PF00563 EAL domain 493 727 1.0E-65 T 11-10-2018 IPR001633 EAL domain AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 322 472 5.1E-14 T 11-10-2018 IPR000160 GGDEF domain AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 Gene3D G3DSA:3.40.50.2300 22 170 1.1E-14 T 11-10-2018 AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 SMART SM00267 314 477 8.5E-12 T 11-10-2018 IPR000160 GGDEF domain AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 Pfam PF00990 Diguanylate cyclase, GGDEF domain 325 469 1.7E-17 T 11-10-2018 IPR000160 GGDEF domain AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 SMART SM00052 483 732 6.7E-101 T 11-10-2018 IPR001633 EAL domain AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 Pfam PF00072 Response regulator receiver domain 32 150 3.6E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 Gene3D G3DSA:3.20.20.450 490 739 5.2E-88 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_16735 cc176d6841ffdcfc145d9a5c92ec4c75 741 SUPERFAMILY SSF52172 29 162 1.85E-12 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_01880 394fd3792a2291e4ede3b505f25f8810 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AVL55_01880 394fd3792a2291e4ede3b505f25f8810 225 SUPERFAMILY SSF51366 4 218 1.13E-72 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AVL55_01880 394fd3792a2291e4ede3b505f25f8810 225 PIRSF PIRSF001461 1 225 9.1E-103 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AVL55_01880 394fd3792a2291e4ede3b505f25f8810 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AVL55_01880 394fd3792a2291e4ede3b505f25f8810 225 Gene3D G3DSA:3.20.20.70 5 221 2.3E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_01880 394fd3792a2291e4ede3b505f25f8810 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.6E-88 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AVL55_01880 394fd3792a2291e4ede3b505f25f8810 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 3.2E-95 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 SUPERFAMILY SSF88946 113 443 5.16E-102 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Pfam PF04539 Sigma-70 region 3 455 530 2.3E-28 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Pfam PF04546 Sigma-70, non-essential region 137 345 1.3E-68 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Gene3D G3DSA:1.10.220.120 1 64 5.1E-29 T 11-10-2018 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Gene3D G3DSA:1.10.10.10 449 525 4.8E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 SUPERFAMILY SSF88659 449 522 5.01E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 372 597 2.2E-37 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Gene3D G3DSA:1.10.10.10 526 610 8.7E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Pfam PF04545 Sigma-70, region 4 544 597 1.0E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Gene3D G3DSA:1.10.601.10 111 445 5.9E-141 T 11-10-2018 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 SUPERFAMILY SSF88659 506 608 1.37E-25 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Pfam PF04542 Sigma-70 region 2 376 445 1.7E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 400 413 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 4.4E-13 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 372 608 6.9E-121 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 PRINTS PR00046 Major sigma-70 factor signature 569 584 6.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 PRINTS PR00046 Major sigma-70 factor signature 548 560 6.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 PRINTS PR00046 Major sigma-70 factor signature 424 432 6.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 PRINTS PR00046 Major sigma-70 factor signature 400 413 6.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 PRINTS PR00046 Major sigma-70 factor signature 584 595 6.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 609 46.548 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 569 595 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_03105 6ed25bf1409752937f14c8d2adbc45c2 610 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 1.6E-29 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 Gene3D G3DSA:3.30.470.20 1 234 7.1E-93 T 11-10-2018 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 PIRSF PIRSF001554 1 388 5.9E-153 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 Pfam PF08442 ATP-grasp domain 2 203 6.5E-81 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 Gene3D G3DSA:3.30.1490.20 21 104 7.1E-93 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.323 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.5E-174 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 SUPERFAMILY SSF52210 240 385 1.96E-54 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 SUPERFAMILY SSF56059 1 238 1.45E-80 T 11-10-2018 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 Pfam PF00549 CoA-ligase 262 382 4.7E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AVL55_09610 2ea21880f99548ad36dafcd6d30ad7ea 388 Gene3D G3DSA:3.40.50.261 240 388 2.1E-57 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AVL55_15385 994102aba096f7904f1bb2192666a6ad 317 Gene3D G3DSA:3.30.1490.20 138 202 3.2E-112 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_15385 994102aba096f7904f1bb2192666a6ad 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 152.642 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AVL55_15385 994102aba096f7904f1bb2192666a6ad 317 Gene3D G3DSA:3.40.50.20 8 115 3.2E-112 T 11-10-2018 AVL55_15385 994102aba096f7904f1bb2192666a6ad 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 2.5E-71 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AVL55_15385 994102aba096f7904f1bb2192666a6ad 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 5 121 1.7E-41 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AVL55_15385 994102aba096f7904f1bb2192666a6ad 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 5 313 5.6E-125 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AVL55_15385 994102aba096f7904f1bb2192666a6ad 317 SUPERFAMILY SSF52440 5 123 1.09E-39 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AVL55_15385 994102aba096f7904f1bb2192666a6ad 317 Gene3D G3DSA:3.30.470.20 116 296 3.2E-112 T 11-10-2018 AVL55_15385 994102aba096f7904f1bb2192666a6ad 317 SUPERFAMILY SSF56059 124 313 3.3E-54 T 11-10-2018 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 ProSitePatterns PS00760 Signal peptidases I lysine active site. 141 153 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 Gene3D G3DSA:2.10.109.10 73 273 3.9E-76 T 11-10-2018 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 SUPERFAMILY SSF51306 73 299 3.4E-68 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 Gene3D G3DSA:2.170.230.10 150 232 3.9E-76 T 11-10-2018 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 Pfam PF00717 Peptidase S24-like 81 162 7.6E-23 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 ProSitePatterns PS00761 Signal peptidases I signature 3. 238 251 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 62 273 8.7E-47 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 139 151 7.6E-27 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 233 252 7.6E-27 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 75 91 7.6E-27 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 ProSitePatterns PS00501 Signal peptidases I serine active site. 84 91 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AVL55_13425 01ef2d47ce4d770d66e0767f9652b969 300 Pfam PF10502 Signal peptidase, peptidase S26 230 270 2.3E-5 T 11-10-2018 IPR019533 Peptidase S26 AVL55_12595 027e4249625d5f2e164ca67eb3fc3a6f 251 SUPERFAMILY SSF53639 12 218 1.39E-59 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AVL55_12595 027e4249625d5f2e164ca67eb3fc3a6f 251 Gene3D G3DSA:3.40.225.10 3 251 6.2E-72 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AVL55_12595 027e4249625d5f2e164ca67eb3fc3a6f 251 SMART SM01007 18 198 4.4E-61 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AVL55_12595 027e4249625d5f2e164ca67eb3fc3a6f 251 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 19 198 2.4E-43 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 SUPERFAMILY SSF52172 125 259 4.55E-14 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 411 2.4E-39 T 11-10-2018 IPR000160 GGDEF domain AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 Gene3D G3DSA:3.40.50.2300 126 250 1.2E-12 T 11-10-2018 AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 Gene3D G3DSA:3.40.50.2300 1 124 7.6E-6 T 11-10-2018 AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 Pfam PF00072 Response regulator receiver domain 128 231 3.0E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 SMART SM00448 126 240 0.0014 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 Gene3D G3DSA:3.30.70.270 251 414 4.0E-45 T 11-10-2018 AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 SMART SM00267 246 412 6.2E-42 T 11-10-2018 IPR000160 GGDEF domain AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 408 8.1E-35 T 11-10-2018 IPR000160 GGDEF domain AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 SUPERFAMILY SSF55073 262 411 8.63E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_00800 6d981c3c0e464e9936b8c62994fa4359 425 SUPERFAMILY SSF52172 5 120 2.56E-7 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 SUPERFAMILY SSF51905 16 375 7.87E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 PIRSF PIRSF000350 2 479 3.1E-234 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 Gene3D G3DSA:3.50.50.60 20 337 1.1E-103 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 52 62 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 PRINTS PR00945 Mercuric reductase class II signature 190 207 4.7E-69 T 11-10-2018 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 PRINTS PR00945 Mercuric reductase class II signature 28 46 4.7E-69 T 11-10-2018 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 PRINTS PR00945 Mercuric reductase class II signature 452 471 4.7E-69 T 11-10-2018 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 PRINTS PR00945 Mercuric reductase class II signature 64 83 4.7E-69 T 11-10-2018 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 PRINTS PR00945 Mercuric reductase class II signature 155 172 4.7E-69 T 11-10-2018 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 PRINTS PR00945 Mercuric reductase class II signature 210 225 4.7E-69 T 11-10-2018 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 PRINTS PR00945 Mercuric reductase class II signature 387 407 4.7E-69 T 11-10-2018 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 SUPERFAMILY SSF55424 354 476 1.03E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 461 1.2E-28 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 Gene3D G3DSA:3.50.50.60 163 279 1.1E-103 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 TIGRFAM TIGR02053 MerA: mercury(II) reductase 18 479 2.6E-162 T 11-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 Gene3D G3DSA:3.30.390.30 354 479 1.7E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_05660 1ff9ee4986d6cf2cd45112b38b24eff1 479 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 18 336 9.4E-59 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_10055 53aa90c608c3f203636894b6f1058e6f 243 Gene3D G3DSA:3.30.70.2970 56 162 1.0E-42 T 11-10-2018 AVL55_10055 53aa90c608c3f203636894b6f1058e6f 243 Pfam PF04402 Protein of unknown function (DUF541) 44 239 6.9E-39 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AVL55_10055 53aa90c608c3f203636894b6f1058e6f 243 Gene3D G3DSA:3.30.110.170 46 239 1.0E-42 T 11-10-2018 AVL55_13570 79476d71358008358eec1641b6fdea37 306 SUPERFAMILY SSF82114 174 305 5.89E-45 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AVL55_13570 79476d71358008358eec1641b6fdea37 306 SUPERFAMILY SSF52374 15 175 2.03E-35 T 11-10-2018 AVL55_13570 79476d71358008358eec1641b6fdea37 306 Gene3D G3DSA:3.40.50.620 1 186 2.5E-61 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_13570 79476d71358008358eec1641b6fdea37 306 Gene3D G3DSA:2.40.30.30 188 306 1.9E-40 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AVL55_13570 79476d71358008358eec1641b6fdea37 306 PIRSF PIRSF004491 2 306 4.5E-105 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AVL55_13570 79476d71358008358eec1641b6fdea37 306 Pfam PF01687 Riboflavin kinase 184 303 2.8E-36 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AVL55_13570 79476d71358008358eec1641b6fdea37 306 Pfam PF06574 FAD synthetase 12 167 9.2E-58 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AVL55_13570 79476d71358008358eec1641b6fdea37 306 SMART SM00904 183 306 1.7E-62 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AVL55_13570 79476d71358008358eec1641b6fdea37 306 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 5.7E-99 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 Gene3D G3DSA:1.10.420.10 609 732 6.0E-135 T 11-10-2018 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 ProSitePatterns PS00436 Peroxidases active site signature. 114 125 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 SUPERFAMILY SSF48113 451 756 9.58E-101 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 76 89 4.1E-40 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 285 308 4.1E-40 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 501 527 4.1E-40 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 50 72 4.1E-40 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 91 116 4.1E-40 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 42 757 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 Gene3D G3DSA:1.10.520.10 454 756 6.0E-135 T 11-10-2018 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 277 287 - T 11-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 Gene3D G3DSA:1.10.520.10 46 451 1.0E-196 T 11-10-2018 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 Hamap MF_01961 Catalase-peroxidase [katG]. 27 757 39.637 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 SUPERFAMILY SSF48113 46 450 6.93E-139 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 Gene3D G3DSA:1.10.420.20 214 418 1.0E-196 T 11-10-2018 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 Pfam PF00141 Peroxidase 108 416 1.0E-47 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 Pfam PF00141 Peroxidase 424 730 1.4E-34 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00458 Haem peroxidase superfamily signature 174 191 1.2E-14 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00458 Haem peroxidase superfamily signature 337 352 1.2E-14 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00458 Haem peroxidase superfamily signature 192 204 1.2E-14 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00458 Haem peroxidase superfamily signature 277 292 1.2E-14 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AVL55_16605 1d85e0957c515ddca412e88ee366ca28 766 PRINTS PR00458 Haem peroxidase superfamily signature 114 128 1.2E-14 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 SMART SM00535 22 150 3.0E-55 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 SMART SM00358 157 225 9.2E-15 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 SUPERFAMILY SSF54768 111 224 1.98E-24 T 11-10-2018 AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 Gene3D G3DSA:3.30.160.20 155 226 1.8E-17 T 11-10-2018 AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 Gene3D G3DSA:1.10.1520.10 5 153 8.8E-46 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 ProSitePatterns PS00517 Ribonuclease III family signature. 39 47 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 11 224 1.1E-73 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 SUPERFAMILY SSF69065 7 158 4.88E-48 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 Pfam PF00035 Double-stranded RNA binding motif 157 224 1.0E-10 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 Pfam PF14622 Ribonuclease-III-like 20 139 2.5E-33 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AVL55_13420 b51cfed5c07e2bfef1cf812199f215a9 228 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 221 29.949 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AVL55_09670 beca4e1e27d23a6a28bd9db48d28a051 490 Pfam PF13347 MFS/sugar transport protein 42 217 6.2E-18 T 11-10-2018 AVL55_09670 beca4e1e27d23a6a28bd9db48d28a051 490 Pfam PF07690 Major Facilitator Superfamily 298 486 1.2E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_09670 beca4e1e27d23a6a28bd9db48d28a051 490 Gene3D G3DSA:1.20.1250.20 10 307 7.2E-25 T 11-10-2018 AVL55_09670 beca4e1e27d23a6a28bd9db48d28a051 490 Gene3D G3DSA:1.20.1250.20 308 489 7.2E-10 T 11-10-2018 AVL55_09670 beca4e1e27d23a6a28bd9db48d28a051 490 SUPERFAMILY SSF103473 11 482 7.59E-41 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_09670 beca4e1e27d23a6a28bd9db48d28a051 490 ProSitePatterns PS00216 Sugar transport proteins signature 1. 336 352 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AVL55_09985 7e6b31272a7b78dc6d1e3ba78566c11e 457 Pfam PF03313 Serine dehydratase alpha chain 189 451 1.4E-101 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AVL55_09985 7e6b31272a7b78dc6d1e3ba78566c11e 457 SUPERFAMILY SSF143548 16 158 2.3E-42 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AVL55_09985 7e6b31272a7b78dc6d1e3ba78566c11e 457 Gene3D G3DSA:3.30.1330.90 10 160 9.9E-52 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AVL55_09985 7e6b31272a7b78dc6d1e3ba78566c11e 457 Pfam PF03315 Serine dehydratase beta chain 3 156 1.1E-55 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AVL55_09985 7e6b31272a7b78dc6d1e3ba78566c11e 457 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 454 8.3E-214 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 Gene3D G3DSA:3.30.390.30 352 471 1.6E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 464 7.3E-30 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 333 6.3E-58 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 SUPERFAMILY SSF55424 352 470 3.78E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 Gene3D G3DSA:3.50.50.60 165 283 1.3E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 5.1E-51 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 5.1E-51 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 5.1E-51 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 5.1E-51 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 5.1E-51 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 5.1E-51 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 439 459 5.1E-51 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 48 63 5.1E-51 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 5.1E-51 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 SUPERFAMILY SSF51905 11 330 1.47E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 9 473 63.889 T 11-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 2.1E-25 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.1E-25 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 2.1E-25 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 2.1E-25 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 2.1E-25 T 11-10-2018 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 PIRSF PIRSF000350 1 470 2.4E-70 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AVL55_16720 5c352ea2d1ba8e4069bb34a82ab585fc 473 Gene3D G3DSA:3.50.50.60 14 339 1.3E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 SUPERFAMILY SSF55021 623 699 7.08E-9 T 11-10-2018 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 SMART SM00954 235 345 2.5E-61 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 Gene3D G3DSA:3.30.70.260 621 703 1.1E-13 T 11-10-2018 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 Gene3D G3DSA:3.30.460.10 193 325 2.5E-46 T 11-10-2018 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 SMART SM00471 41 153 2.9E-9 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 Pfam PF13328 HD domain 28 175 1.1E-52 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 696 2.1E-254 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 1.6E-35 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 SUPERFAMILY SSF109604 4 190 5.02E-73 T 11-10-2018 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 Gene3D G3DSA:3.10.20.30 381 456 4.3E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 Pfam PF13291 ACT domain 620 697 6.1E-16 T 11-10-2018 IPR002912 ACT domain AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 Pfam PF02824 TGS domain 388 447 3.6E-19 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 Gene3D G3DSA:1.10.3210.10 3 190 2.4E-79 T 11-10-2018 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 SUPERFAMILY SSF81271 375 448 2.4E-19 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AVL55_00570 006c4d005a8434b34360c6541d17c35c 703 SUPERFAMILY SSF81301 181 392 1.49E-60 T 11-10-2018 AVL55_09390 05b658ce4c0c2b01994a9d9bbd6fa1d0 97 Pfam PF06844 Protein of unknown function (DUF1244) 27 92 4.8E-35 T 11-10-2018 IPR023163 SMc04008-like domain AVL55_09390 05b658ce4c0c2b01994a9d9bbd6fa1d0 97 Gene3D G3DSA:1.10.3340.10 1 97 6.9E-45 T 11-10-2018 IPR036810 SMc04008-like superfamily AVL55_09390 05b658ce4c0c2b01994a9d9bbd6fa1d0 97 SUPERFAMILY SSF158757 1 77 2.22E-36 T 11-10-2018 IPR036810 SMc04008-like superfamily AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 SMART SM00382 161 304 2.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 Gene3D G3DSA:3.40.50.300 126 312 3.3E-67 T 11-10-2018 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 7.2E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 7.2E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 Pfam PF02954 Bacterial regulatory protein, Fis family 429 466 1.3E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 1.0E-228 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 Pfam PF00158 Sigma-54 interaction domain 141 307 5.3E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 SUPERFAMILY SSF52540 140 384 2.58E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 SUPERFAMILY SSF46689 381 468 9.68E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 Gene3D G3DSA:3.40.50.2300 1 125 1.7E-36 T 11-10-2018 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 Gene3D G3DSA:1.10.10.60 385 469 2.8E-23 T 11-10-2018 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 SUPERFAMILY SSF52172 1 186 7.97E-41 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 Pfam PF00072 Response regulator receiver domain 6 114 8.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 Gene3D G3DSA:1.10.8.60 313 384 6.0E-22 T 11-10-2018 AVL55_16015 0d34adbd8058ee4a2a246e36c2b21718 469 SMART SM00448 4 116 1.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15525 034e1314c41680e9e11a491f03448199 314 SUPERFAMILY SSF55060 179 294 2.64E-27 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AVL55_15525 034e1314c41680e9e11a491f03448199 314 SUPERFAMILY SSF54211 4 164 9.11E-30 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_15525 034e1314c41680e9e11a491f03448199 314 Pfam PF08544 GHMP kinases C terminal 219 294 2.3E-12 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AVL55_15525 034e1314c41680e9e11a491f03448199 314 Hamap MF_00384 Homoserine kinase [thrB]. 6 314 27.434 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AVL55_15525 034e1314c41680e9e11a491f03448199 314 PRINTS PR00958 Homoserine kinase signature 143 156 2.5E-27 T 11-10-2018 AVL55_15525 034e1314c41680e9e11a491f03448199 314 PRINTS PR00958 Homoserine kinase signature 260 275 2.5E-27 T 11-10-2018 AVL55_15525 034e1314c41680e9e11a491f03448199 314 PRINTS PR00958 Homoserine kinase signature 11 26 2.5E-27 T 11-10-2018 AVL55_15525 034e1314c41680e9e11a491f03448199 314 PRINTS PR00958 Homoserine kinase signature 103 118 2.5E-27 T 11-10-2018 AVL55_15525 034e1314c41680e9e11a491f03448199 314 PRINTS PR00958 Homoserine kinase signature 181 198 2.5E-27 T 11-10-2018 AVL55_15525 034e1314c41680e9e11a491f03448199 314 Gene3D G3DSA:3.30.230.10 3 172 2.2E-46 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_15525 034e1314c41680e9e11a491f03448199 314 Gene3D G3DSA:3.30.70.890 173 304 1.5E-36 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AVL55_15525 034e1314c41680e9e11a491f03448199 314 TIGRFAM TIGR00191 thrB: homoserine kinase 7 313 1.3E-87 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AVL55_15525 034e1314c41680e9e11a491f03448199 314 Pfam PF00288 GHMP kinases N terminal domain 90 156 7.7E-14 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AVL55_15525 034e1314c41680e9e11a491f03448199 314 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AVL55_15525 034e1314c41680e9e11a491f03448199 314 PIRSF PIRSF000676 1 314 8.6E-76 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 Gene3D G3DSA:2.40.50.250 487 603 5.5E-130 T 11-10-2018 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 SUPERFAMILY SSF52540 5 211 3.76E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 SUPERFAMILY SSF54980 306 391 3.6E-14 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 SUPERFAMILY SSF50447 155 303 1.04E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 Gene3D G3DSA:3.40.50.300 5 202 1.4E-69 T 11-10-2018 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 Pfam PF03144 Elongation factor Tu domain 2 223 293 9.4E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 PRINTS PR00315 GTP-binding elongation factor signature 55 63 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 PRINTS PR00315 GTP-binding elongation factor signature 75 85 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 PRINTS PR00315 GTP-binding elongation factor signature 127 136 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 PRINTS PR00315 GTP-binding elongation factor signature 91 102 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 PRINTS PR00315 GTP-binding elongation factor signature 11 24 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 Gene3D G3DSA:3.30.70.870 310 594 5.5E-130 T 11-10-2018 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 SUPERFAMILY SSF54980 402 516 1.15E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 Pfam PF00679 Elongation factor G C-terminus 401 481 1.5E-22 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 4.8E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 Gene3D G3DSA:2.40.30.10 203 303 1.5E-32 T 11-10-2018 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 1.2E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 9.6E-292 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AVL55_15995 1864af08b598e56fe4141c5f63e5babc 610 Gene3D G3DSA:3.30.70.240 393 486 5.5E-130 T 11-10-2018 AVL55_17905 8b42fe514cac890d11b605da984218a4 304 Pfam PF00583 Acetyltransferase (GNAT) family 20 122 6.2E-14 T 11-10-2018 IPR000182 GNAT domain AVL55_17905 8b42fe514cac890d11b605da984218a4 304 SUPERFAMILY SSF54637 153 297 1.01E-42 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_17905 8b42fe514cac890d11b605da984218a4 304 SUPERFAMILY SSF55729 2 166 1.86E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_17905 8b42fe514cac890d11b605da984218a4 304 Gene3D G3DSA:3.10.129.10 146 298 6.0E-49 T 11-10-2018 AVL55_17905 8b42fe514cac890d11b605da984218a4 304 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.1E-52 T 11-10-2018 IPR012660 Thioesterase, putative AVL55_17905 8b42fe514cac890d11b605da984218a4 304 Gene3D G3DSA:3.40.630.30 3 145 2.0E-24 T 11-10-2018 AVL55_17905 8b42fe514cac890d11b605da984218a4 304 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 6.9E-43 T 11-10-2018 IPR012660 Thioesterase, putative AVL55_07935 55b44833043129491ecb658b29b396da 108 Pfam PF00576 HIUase/Transthyretin family 4 107 4.9E-31 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AVL55_07935 55b44833043129491ecb658b29b396da 108 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 108 1.3E-32 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AVL55_07935 55b44833043129491ecb658b29b396da 108 SUPERFAMILY SSF49472 1 108 1.31E-35 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AVL55_07935 55b44833043129491ecb658b29b396da 108 PRINTS PR00189 Transthyretin signature 3 23 1.6E-5 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AVL55_07935 55b44833043129491ecb658b29b396da 108 PRINTS PR00189 Transthyretin signature 86 108 1.6E-5 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AVL55_07935 55b44833043129491ecb658b29b396da 108 Gene3D G3DSA:2.60.40.180 1 108 9.6E-34 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AVL55_07935 55b44833043129491ecb658b29b396da 108 ProSitePatterns PS00769 Transthyretin signature 2. 91 103 - T 11-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AVL55_16430 b84d4169f381669c78272a0a0cc174a2 419 SUPERFAMILY SSF55874 316 406 3.01E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16430 b84d4169f381669c78272a0a0cc174a2 419 Gene3D G3DSA:3.30.565.10 282 407 9.6E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16430 b84d4169f381669c78272a0a0cc174a2 419 Pfam PF07730 Histidine kinase 214 276 4.5E-8 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AVL55_16430 b84d4169f381669c78272a0a0cc174a2 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 405 2.2E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_14255 9502161f4a798be113ca65d448c58cba 327 SUPERFAMILY SSF50974 5 324 5.75E-72 T 11-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AVL55_14255 9502161f4a798be113ca65d448c58cba 327 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 27 325 1.2E-144 T 11-10-2018 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein AVL55_14255 9502161f4a798be113ca65d448c58cba 327 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 29 63 4.8E-10 T 11-10-2018 IPR011964 YVTN beta-propeller repeat AVL55_14255 9502161f4a798be113ca65d448c58cba 327 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 108 149 6.0E-10 T 11-10-2018 IPR011964 YVTN beta-propeller repeat AVL55_14255 9502161f4a798be113ca65d448c58cba 327 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 288 324 1.7E-12 T 11-10-2018 IPR011964 YVTN beta-propeller repeat AVL55_14255 9502161f4a798be113ca65d448c58cba 327 Gene3D G3DSA:2.130.10.10 228 325 9.4E-19 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_14255 9502161f4a798be113ca65d448c58cba 327 Gene3D G3DSA:2.130.10.10 27 227 7.2E-51 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_00510 52bf2f86417e35953be98a6df103e6f6 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 1.5E-15 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis AVL55_00510 52bf2f86417e35953be98a6df103e6f6 69 SUPERFAMILY SSF54285 4 69 6.71E-14 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AVL55_00510 52bf2f86417e35953be98a6df103e6f6 69 Gene3D G3DSA:3.10.20.30 4 69 2.6E-18 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_00510 52bf2f86417e35953be98a6df103e6f6 69 Pfam PF02597 ThiS family 8 69 2.9E-9 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Pfam PF02817 e3 binding domain 377 411 6.3E-16 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Gene3D G3DSA:3.30.559.10 436 683 8.4E-95 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 SUPERFAMILY SSF47005 370 415 3.4E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 SUPERFAMILY SSF51230 244 336 5.76E-22 T 11-10-2018 IPR011053 Single hybrid motif AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 SUPERFAMILY SSF51230 3 95 4.58E-19 T 11-10-2018 IPR011053 Single hybrid motif AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Gene3D G3DSA:2.40.50.100 126 205 2.4E-18 T 11-10-2018 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Pfam PF00364 Biotin-requiring enzyme 129 200 5.6E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Pfam PF00364 Biotin-requiring enzyme 246 317 7.3E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Pfam PF00364 Biotin-requiring enzyme 6 75 2.9E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Gene3D G3DSA:2.40.50.100 4 80 3.0E-16 T 11-10-2018 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 268 297 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 151 180 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Gene3D G3DSA:4.10.320.10 376 420 1.9E-20 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 452 682 7.1E-76 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 215 683 2.9E-185 T 11-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 Gene3D G3DSA:2.40.50.100 245 322 9.1E-20 T 11-10-2018 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 SUPERFAMILY SSF52777 442 682 1.47E-79 T 11-10-2018 AVL55_15120 b42b988c26e525cdfd2f5f4729d88348 683 SUPERFAMILY SSF51230 127 219 2.09E-21 T 11-10-2018 IPR011053 Single hybrid motif AVL55_01300 541aeeff768503072952db789ca211f5 1035 Gene3D G3DSA:3.30.70.1440 675 871 2.1E-283 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 SUPERFAMILY SSF82693 42 127 2.62E-20 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 Gene3D G3DSA:3.30.2090.10 189 280 2.1E-283 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_01300 541aeeff768503072952db789ca211f5 1035 Gene3D G3DSA:3.30.70.1430 42 821 2.1E-283 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 Gene3D G3DSA:1.20.1640.10 16 518 2.1E-283 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 Gene3D G3DSA:3.30.70.1430 570 674 2.1E-283 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 SUPERFAMILY SSF82693 155 333 2.79E-17 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 SUPERFAMILY SSF82714 725 809 7.85E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_01300 541aeeff768503072952db789ca211f5 1035 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1034 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AVL55_01300 541aeeff768503072952db789ca211f5 1035 Gene3D G3DSA:1.20.1640.10 519 1026 2.1E-283 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 Gene3D G3DSA:3.30.2090.10 726 813 2.1E-283 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_01300 541aeeff768503072952db789ca211f5 1035 SUPERFAMILY SSF82866 299 506 2.35E-33 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_01300 541aeeff768503072952db789ca211f5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 1.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_01300 541aeeff768503072952db789ca211f5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_01300 541aeeff768503072952db789ca211f5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_01300 541aeeff768503072952db789ca211f5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_01300 541aeeff768503072952db789ca211f5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_01300 541aeeff768503072952db789ca211f5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_01300 541aeeff768503072952db789ca211f5 1035 Gene3D G3DSA:3.30.70.1320 135 333 2.1E-283 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 SUPERFAMILY SSF82866 808 1033 2.62E-52 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 SUPERFAMILY SSF82693 574 667 9.42E-7 T 11-10-2018 AVL55_01300 541aeeff768503072952db789ca211f5 1035 Pfam PF00873 AcrB/AcrD/AcrF family 5 1029 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_01300 541aeeff768503072952db789ca211f5 1035 SUPERFAMILY SSF82714 192 274 5.75E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_04590 da3b0e61da70ac142af509e4730a4146 297 Pfam PF00483 Nucleotidyl transferase 6 277 4.2E-28 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AVL55_04590 da3b0e61da70ac142af509e4730a4146 297 SUPERFAMILY SSF53448 5 285 3.83E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_04590 da3b0e61da70ac142af509e4730a4146 297 Gene3D G3DSA:3.90.550.10 1 297 1.1E-87 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_04590 da3b0e61da70ac142af509e4730a4146 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 273 6.3E-111 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AVL55_03115 c123e7dd17dfe9c9aa4de22d3084421c 148 Gene3D G3DSA:1.10.10.410 91 147 2.1E-19 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AVL55_03115 c123e7dd17dfe9c9aa4de22d3084421c 148 SUPERFAMILY SSF89095 1 147 2.98E-41 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AVL55_03115 c123e7dd17dfe9c9aa4de22d3084421c 148 Pfam PF09424 Yqey-like protein 5 146 5.9E-52 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 AVL55_03115 c123e7dd17dfe9c9aa4de22d3084421c 148 Gene3D G3DSA:1.10.1510.10 1 90 3.4E-25 T 11-10-2018 AVL55_17485 551146c7c40e5085d5316e293b82e36e 133 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.668 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17485 551146c7c40e5085d5316e293b82e36e 133 Gene3D G3DSA:3.90.1030.10 1 117 1.2E-47 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17485 551146c7c40e5085d5316e293b82e36e 133 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.9E-49 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17485 551146c7c40e5085d5316e293b82e36e 133 SUPERFAMILY SSF64263 1 119 1.96E-51 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17485 551146c7c40e5085d5316e293b82e36e 133 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17485 551146c7c40e5085d5316e293b82e36e 133 Pfam PF01196 Ribosomal protein L17 20 116 3.4E-34 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 Gene3D G3DSA:1.10.10.10 1 73 2.2E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 Gene3D G3DSA:3.30.1360.40 74 154 1.1E-30 T 11-10-2018 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 Hamap MF_00173 Arginine repressor [argR]. 1 154 59.378 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 SUPERFAMILY SSF46785 4 75 1.18E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 PRINTS PR01467 Bacterial arginine repressor signature 41 56 3.7E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 PRINTS PR01467 Bacterial arginine repressor signature 24 37 3.7E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 PRINTS PR01467 Bacterial arginine repressor signature 89 102 3.7E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 PRINTS PR01467 Bacterial arginine repressor signature 120 135 3.7E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 Pfam PF02863 Arginine repressor, C-terminal domain 81 148 1.1E-22 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 88 152 1.0E-16 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 SUPERFAMILY SSF55252 81 150 1.1E-19 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 150 6.5E-43 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AVL55_17095 388ed76e7bb66b93301a82e5022d39ad 154 Pfam PF01316 Arginine repressor, DNA binding domain 5 73 5.3E-21 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 Pfam PF00175 Oxidoreductase NAD-binding domain 112 232 2.3E-9 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 Pfam PF00970 Oxidoreductase FAD-binding domain 15 92 1.9E-9 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 Gene3D G3DSA:3.40.50.80 103 258 2.1E-43 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 SUPERFAMILY SSF52343 104 259 9.56E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 Gene3D G3DSA:2.40.30.10 1 97 1.4E-30 T 11-10-2018 AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 1.6E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 159 1.6E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.6E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 1.6E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_13105 0321f6c1553b00ba2c0ff585f6f39c8d 262 SUPERFAMILY SSF63380 3 99 9.75E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_00785 39f3014000ea4bc2748ded1119acb737 170 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 37 168 8.2E-13 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AVL55_00785 39f3014000ea4bc2748ded1119acb737 170 Gene3D G3DSA:3.10.129.10 5 170 5.2E-52 T 11-10-2018 AVL55_00785 39f3014000ea4bc2748ded1119acb737 170 Pfam PF03061 Thioesterase superfamily 72 158 3.6E-14 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AVL55_00785 39f3014000ea4bc2748ded1119acb737 170 SUPERFAMILY SSF54637 21 168 1.1E-23 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 3.5E-33 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 487 1.1E-122 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 39.745 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 SUPERFAMILY SSF52949 2 183 1.41E-49 T 11-10-2018 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 SUPERFAMILY SSF53187 180 494 2.23E-122 T 11-10-2018 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 Gene3D G3DSA:3.40.630.10 181 496 2.3E-136 T 11-10-2018 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 Gene3D G3DSA:3.40.220.10 1 159 2.4E-57 T 11-10-2018 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 2.7E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 2.7E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 2.7E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 2.7E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_16070 4c9a043ee5008430ebee7b528c467def 501 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 2.7E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_03065 b05b21fa3479d90ab4f14991a805c542 394 SMART SM00922 146 260 1.4E-9 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AVL55_03065 b05b21fa3479d90ab4f14991a805c542 394 Gene3D G3DSA:3.20.20.120 111 372 1.2E-144 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AVL55_03065 b05b21fa3479d90ab4f14991a805c542 394 SUPERFAMILY SSF51604 106 385 4.9E-74 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AVL55_03065 b05b21fa3479d90ab4f14991a805c542 394 SUPERFAMILY SSF54826 1 122 3.83E-31 T 11-10-2018 AVL55_03065 b05b21fa3479d90ab4f14991a805c542 394 Gene3D G3DSA:3.30.390.10 19 382 1.2E-144 T 11-10-2018 IPR029017 Enolase-like, N-terminal AVL55_03065 b05b21fa3479d90ab4f14991a805c542 394 Pfam PF13378 Enolase C-terminal domain-like 150 380 6.1E-49 T 11-10-2018 IPR029065 Enolase C-terminal domain-like AVL55_03065 b05b21fa3479d90ab4f14991a805c542 394 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 22 118 2.5E-19 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AVL55_03065 b05b21fa3479d90ab4f14991a805c542 394 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 93 118 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 SUPERFAMILY SSF46785 1 60 1.7E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 SUPERFAMILY SSF54909 62 136 2.28E-10 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 SMART SM00344 1 107 8.9E-33 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.4E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 Pfam PF01037 Lrp/AsnC ligand binding domain 78 133 5.1E-8 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 Gene3D G3DSA:1.10.10.10 1 52 5.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.9E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.9E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.9E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_11735 8cf63456f60c32a0c3f0bf23bb80c675 142 Gene3D G3DSA:3.30.70.920 53 139 7.7E-17 T 11-10-2018 AVL55_03950 7e554eea78640726ca886f527de04420 229 SUPERFAMILY SSF46894 125 221 3.68E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_03950 7e554eea78640726ca886f527de04420 229 SMART SM00862 146 221 1.5E-11 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_03950 7e554eea78640726ca886f527de04420 229 SMART SM00448 1 112 2.8E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_03950 7e554eea78640726ca886f527de04420 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 1.6E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_03950 7e554eea78640726ca886f527de04420 229 Gene3D G3DSA:1.10.10.10 124 228 1.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_03950 7e554eea78640726ca886f527de04420 229 Gene3D G3DSA:3.40.50.2300 1 123 6.8E-33 T 11-10-2018 AVL55_03950 7e554eea78640726ca886f527de04420 229 SUPERFAMILY SSF52172 1 119 7.83E-34 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_03950 7e554eea78640726ca886f527de04420 229 Pfam PF00072 Response regulator receiver domain 3 112 2.2E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_00245 a4ee8124e42b933d49eadf3ee752f19d 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AVL55_00245 a4ee8124e42b933d49eadf3ee752f19d 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.7E-68 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AVL55_00245 a4ee8124e42b933d49eadf3ee752f19d 225 SUPERFAMILY SSF47781 17 87 2.0E-6 T 11-10-2018 IPR010994 RuvA domain 2-like AVL55_00245 a4ee8124e42b933d49eadf3ee752f19d 225 SUPERFAMILY SSF102712 118 192 4.84E-5 T 11-10-2018 AVL55_00245 a4ee8124e42b933d49eadf3ee752f19d 225 Pfam PF04002 RadC-like JAB domain 104 222 2.5E-41 T 11-10-2018 IPR025657 RadC-like JAB domain AVL55_00245 a4ee8124e42b933d49eadf3ee752f19d 225 Gene3D G3DSA:3.40.140.10 101 224 9.7E-41 T 11-10-2018 AVL55_03005 5dd33985e4109e86b375495d545de656 300 Gene3D G3DSA:3.40.50.300 3 299 3.3E-64 T 11-10-2018 AVL55_03005 5dd33985e4109e86b375495d545de656 300 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 2.3E-105 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 AVL55_03005 5dd33985e4109e86b375495d545de656 300 Pfam PF00005 ABC transporter 25 166 5.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_03005 5dd33985e4109e86b375495d545de656 300 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_03005 5dd33985e4109e86b375495d545de656 300 SMART SM00382 34 216 1.9E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_03005 5dd33985e4109e86b375495d545de656 300 SUPERFAMILY SSF52540 6 246 5.08E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 Gene3D G3DSA:1.10.275.10 1 117 4.0E-49 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 Gene3D G3DSA:1.20.200.10 118 446 1.2E-156 T 11-10-2018 AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 Pfam PF00206 Lyase 14 312 1.6E-70 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 7.4E-18 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 7.4E-18 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 7.4E-18 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 7.4E-18 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 Gene3D G3DSA:1.10.40.30 382 445 1.2E-156 T 11-10-2018 AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.4E-51 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 SUPERFAMILY SSF48557 4 446 3.77E-107 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AVL55_09085 b890a5f9cccc052c0f410444dcd540eb 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.9E-141 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_03640 4034e168f8d9bbb7f95041a03636e522 150 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 26 134 1.1E-8 T 11-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 SUPERFAMILY SSF52096 169 539 9.11E-69 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 241 322 6.6E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 Gene3D G3DSA:2.30.42.10 237 324 4.2E-15 T 11-10-2018 AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 202 555 3.5E-104 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 SMART SM00245 329 535 2.5E-60 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 SMART SM00228 248 325 1.8E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 Gene3D G3DSA:3.90.226.10 327 552 7.7E-57 T 11-10-2018 AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 SUPERFAMILY SSF50156 238 323 1.87E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 Pfam PF03572 Peptidase family S41 365 532 3.8E-51 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AVL55_10075 12a51458e998528aef70c7c41b64ad5d 680 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 539 671 1.2E-37 T 11-10-2018 IPR020992 Tail specific protease, C-terminal AVL55_19575 0f6329d661ee8190d9b0e6e5665742a9 305 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 21 299 3.4E-100 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AVL55_19575 0f6329d661ee8190d9b0e6e5665742a9 305 Pfam PF01040 UbiA prenyltransferase family 35 283 1.2E-61 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AVL55_19575 0f6329d661ee8190d9b0e6e5665742a9 305 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 300 19.605 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AVL55_19575 0f6329d661ee8190d9b0e6e5665742a9 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AVL55_19575 0f6329d661ee8190d9b0e6e5665742a9 305 Gene3D G3DSA:1.10.357.140 26 184 3.2E-20 T 11-10-2018 AVL55_18690 6f41a166905c033c491e0c39130e42d8 360 Pfam PF13682 Chemoreceptor zinc-binding domain 260 326 1.3E-13 T 11-10-2018 IPR025991 Chemoreceptor zinc-binding domain AVL55_18690 6f41a166905c033c491e0c39130e42d8 360 Gene3D G3DSA:1.10.287.950 4 284 2.4E-44 T 11-10-2018 AVL55_18690 6f41a166905c033c491e0c39130e42d8 360 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 117 252 1.5E-31 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_18690 6f41a166905c033c491e0c39130e42d8 360 SUPERFAMILY SSF58104 60 270 2.35E-45 T 11-10-2018 AVL55_18690 6f41a166905c033c491e0c39130e42d8 360 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 141 168 5.7E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_18690 6f41a166905c033c491e0c39130e42d8 360 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 170 199 5.7E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_18690 6f41a166905c033c491e0c39130e42d8 360 SMART SM00283 35 283 1.6E-21 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_16820 3564999463f01ab48e18628f78571a9f 706 SUPERFAMILY SSF55073 288 444 1.96E-30 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_16820 3564999463f01ab48e18628f78571a9f 706 SUPERFAMILY SSF141868 457 703 4.84E-86 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_16820 3564999463f01ab48e18628f78571a9f 706 Pfam PF00990 Diguanylate cyclase, GGDEF domain 285 437 3.5E-28 T 11-10-2018 IPR000160 GGDEF domain AVL55_16820 3564999463f01ab48e18628f78571a9f 706 SMART SM00052 452 697 1.8E-103 T 11-10-2018 IPR001633 EAL domain AVL55_16820 3564999463f01ab48e18628f78571a9f 706 Gene3D G3DSA:3.30.70.270 281 455 2.8E-35 T 11-10-2018 AVL55_16820 3564999463f01ab48e18628f78571a9f 706 SUPERFAMILY SSF55785 173 277 1.37E-6 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_16820 3564999463f01ab48e18628f78571a9f 706 Pfam PF00563 EAL domain 458 692 1.5E-72 T 11-10-2018 IPR001633 EAL domain AVL55_16820 3564999463f01ab48e18628f78571a9f 706 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 284 438 7.2E-24 T 11-10-2018 IPR000160 GGDEF domain AVL55_16820 3564999463f01ab48e18628f78571a9f 706 SMART SM00267 273 442 6.6E-23 T 11-10-2018 IPR000160 GGDEF domain AVL55_16820 3564999463f01ab48e18628f78571a9f 706 Gene3D G3DSA:3.20.20.450 456 706 1.4E-93 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_16820 3564999463f01ab48e18628f78571a9f 706 Gene3D G3DSA:3.30.450.20 157 274 3.5E-5 T 11-10-2018 AVL55_15570 04e443fefa930c7b9eadc3957b5a1dfb 342 PIRSF PIRSF005508 1 342 6.9E-127 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AVL55_15570 04e443fefa930c7b9eadc3957b5a1dfb 342 Gene3D G3DSA:1.20.1530.20 2 337 1.8E-30 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AVL55_15570 04e443fefa930c7b9eadc3957b5a1dfb 342 Pfam PF01758 Sodium Bile acid symporter family 47 246 3.0E-46 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AVL55_15570 04e443fefa930c7b9eadc3957b5a1dfb 342 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 334 2.9E-127 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AVL55_05935 d86381e283424475d75254aaefece30b 73 Gene3D G3DSA:1.20.1640.10 1 72 3.1E-20 T 11-10-2018 AVL55_05935 d86381e283424475d75254aaefece30b 73 Pfam PF00873 AcrB/AcrD/AcrF family 1 59 2.2E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05935 d86381e283424475d75254aaefece30b 73 SUPERFAMILY SSF82866 1 58 1.31E-11 T 11-10-2018 AVL55_00825 9273976bd3aa09d89c5a5aa1ff9a5215 306 Gene3D G3DSA:1.10.150.130 11 103 7.7E-17 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AVL55_00825 9273976bd3aa09d89c5a5aa1ff9a5215 306 SUPERFAMILY SSF56349 12 294 1.03E-53 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_00825 9273976bd3aa09d89c5a5aa1ff9a5215 306 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 17 305 3.1E-102 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 AVL55_00825 9273976bd3aa09d89c5a5aa1ff9a5215 306 Gene3D G3DSA:1.10.443.10 115 297 1.2E-55 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_00825 9273976bd3aa09d89c5a5aa1ff9a5215 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 93 5.8E-16 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AVL55_00825 9273976bd3aa09d89c5a5aa1ff9a5215 306 Pfam PF00589 Phage integrase family 118 289 1.1E-44 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_00825 9273976bd3aa09d89c5a5aa1ff9a5215 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 303 54.54 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AVL55_13165 73c4517ccdbdc50349688ac44a295e50 195 Gene3D G3DSA:2.40.50.1020 85 188 6.4E-15 T 11-10-2018 AVL55_13165 73c4517ccdbdc50349688ac44a295e50 195 Pfam PF04397 LytTr DNA-binding domain 102 193 2.7E-24 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AVL55_13165 73c4517ccdbdc50349688ac44a295e50 195 SMART SM00850 98 194 2.8E-27 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 Gene3D G3DSA:3.30.300.20 186 302 2.0E-43 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 Pfam PF07650 KH domain 209 285 4.3E-20 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 3.6E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 60 75 3.6E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 SUPERFAMILY SSF52540 11 206 5.26E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 170 3.5E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 Gene3D G3DSA:3.40.50.300 4 184 1.1E-50 T 11-10-2018 AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 Hamap MF_00367 GTPase Era [era]. 6 297 36.157 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 SUPERFAMILY SSF54814 182 297 9.94E-44 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.0E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_13415 067aa81249bc9610c72d4be78e74372d 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 5.2E-104 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08870 bea58340d34e31ef12b16b305a7685fd 324 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 320 17.899 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_08870 bea58340d34e31ef12b16b305a7685fd 324 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 2.4E-56 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AVL55_08870 bea58340d34e31ef12b16b305a7685fd 324 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 248 297 6.1E-5 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_08870 bea58340d34e31ef12b16b305a7685fd 324 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.4E-80 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_08870 bea58340d34e31ef12b16b305a7685fd 324 Gene3D G3DSA:3.30.2350.10 1 245 7.8E-89 T 11-10-2018 AVL55_08870 bea58340d34e31ef12b16b305a7685fd 324 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 244 6.6E-20 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AVL55_08870 bea58340d34e31ef12b16b305a7685fd 324 SUPERFAMILY SSF55120 9 244 1.3E-77 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_01840 086265928dbdda5588051929697cb7ce 722 Gene3D G3DSA:3.20.20.450 465 718 6.0E-73 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_01840 086265928dbdda5588051929697cb7ce 722 SMART SM00052 466 711 4.4E-72 T 11-10-2018 IPR001633 EAL domain AVL55_01840 086265928dbdda5588051929697cb7ce 722 Pfam PF00563 EAL domain 472 706 4.3E-60 T 11-10-2018 IPR001633 EAL domain AVL55_01840 086265928dbdda5588051929697cb7ce 722 Gene3D G3DSA:3.30.450.20 33 169 3.8E-10 T 11-10-2018 AVL55_01840 086265928dbdda5588051929697cb7ce 722 SUPERFAMILY SSF55785 101 174 8.2E-7 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_01840 086265928dbdda5588051929697cb7ce 722 SUPERFAMILY SSF55073 304 457 6.98E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_01840 086265928dbdda5588051929697cb7ce 722 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 296 454 5.1E-38 T 11-10-2018 IPR000160 GGDEF domain AVL55_01840 086265928dbdda5588051929697cb7ce 722 Gene3D G3DSA:3.30.70.270 294 460 1.3E-48 T 11-10-2018 AVL55_01840 086265928dbdda5588051929697cb7ce 722 Pfam PF00990 Diguanylate cyclase, GGDEF domain 299 451 1.2E-38 T 11-10-2018 IPR000160 GGDEF domain AVL55_01840 086265928dbdda5588051929697cb7ce 722 SMART SM00086 127 171 1.2 T 11-10-2018 IPR001610 PAC motif AVL55_01840 086265928dbdda5588051929697cb7ce 722 SMART SM00086 246 288 0.027 T 11-10-2018 IPR001610 PAC motif AVL55_01840 086265928dbdda5588051929697cb7ce 722 Gene3D G3DSA:3.30.450.20 176 293 1.8E-11 T 11-10-2018 AVL55_01840 086265928dbdda5588051929697cb7ce 722 SUPERFAMILY SSF141868 472 716 2.09E-69 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_01840 086265928dbdda5588051929697cb7ce 722 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 183 295 1.9E-7 T 11-10-2018 IPR000014 PAS domain AVL55_01840 086265928dbdda5588051929697cb7ce 722 SUPERFAMILY SSF55785 190 297 6.28E-11 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_01840 086265928dbdda5588051929697cb7ce 722 SMART SM00267 288 456 1.7E-49 T 11-10-2018 IPR000160 GGDEF domain AVL55_01840 086265928dbdda5588051929697cb7ce 722 Pfam PF13426 PAS domain 190 287 2.3E-4 T 11-10-2018 IPR000014 PAS domain AVL55_08640 27c2ac5b11d0b00bc905ae78c270c40a 313 Pfam PF01479 S4 domain 21 67 8.6E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_08640 27c2ac5b11d0b00bc905ae78c270c40a 313 Gene3D G3DSA:3.10.290.10 9 73 2.4E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AVL55_08640 27c2ac5b11d0b00bc905ae78c270c40a 313 SMART SM00363 21 83 1.2E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_08640 27c2ac5b11d0b00bc905ae78c270c40a 313 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_08640 27c2ac5b11d0b00bc905ae78c270c40a 313 SUPERFAMILY SSF55174 20 71 3.53E-8 T 11-10-2018 AVL55_08640 27c2ac5b11d0b00bc905ae78c270c40a 313 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 313 3.0E-90 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_08640 27c2ac5b11d0b00bc905ae78c270c40a 313 Gene3D G3DSA:3.30.2350.10 93 313 9.2E-83 T 11-10-2018 AVL55_08640 27c2ac5b11d0b00bc905ae78c270c40a 313 Pfam PF00849 RNA pseudouridylate synthase 102 249 8.5E-32 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_08640 27c2ac5b11d0b00bc905ae78c270c40a 313 SUPERFAMILY SSF55120 95 311 8.0E-66 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_16245 e2f81da9ee0a076f47721974ed1912c2 298 Pfam PF00589 Phage integrase family 113 281 5.0E-32 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_16245 e2f81da9ee0a076f47721974ed1912c2 298 Gene3D G3DSA:1.10.443.10 108 296 1.3E-42 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_16245 e2f81da9ee0a076f47721974ed1912c2 298 SUPERFAMILY SSF56349 111 294 3.53E-45 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_18635 8c0bd5dba1217fc6425d3fb3cbd0e608 681 Pfam PF00593 TonB dependent receptor 263 679 2.0E-33 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_18635 8c0bd5dba1217fc6425d3fb3cbd0e608 681 Gene3D G3DSA:2.40.170.20 148 681 2.2E-94 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_18635 8c0bd5dba1217fc6425d3fb3cbd0e608 681 Gene3D G3DSA:2.170.130.10 40 146 3.0E-38 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_18635 8c0bd5dba1217fc6425d3fb3cbd0e608 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 140 8.7E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_18635 8c0bd5dba1217fc6425d3fb3cbd0e608 681 SUPERFAMILY SSF56935 28 681 6.8E-93 T 11-10-2018 AVL55_17155 a9cb8b603ae5c6275f81725fff62d6d4 326 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 306 2.7E-39 T 11-10-2018 IPR000160 GGDEF domain AVL55_17155 a9cb8b603ae5c6275f81725fff62d6d4 326 SMART SM00448 14 126 3.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17155 a9cb8b603ae5c6275f81725fff62d6d4 326 Pfam PF00072 Response regulator receiver domain 16 126 6.4E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17155 a9cb8b603ae5c6275f81725fff62d6d4 326 SMART SM00267 132 307 5.1E-46 T 11-10-2018 IPR000160 GGDEF domain AVL55_17155 a9cb8b603ae5c6275f81725fff62d6d4 326 SUPERFAMILY SSF52172 13 156 1.71E-33 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_17155 a9cb8b603ae5c6275f81725fff62d6d4 326 SUPERFAMILY SSF55073 148 305 3.53E-40 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_17155 a9cb8b603ae5c6275f81725fff62d6d4 326 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 303 1.7E-39 T 11-10-2018 IPR000160 GGDEF domain AVL55_17155 a9cb8b603ae5c6275f81725fff62d6d4 326 Gene3D G3DSA:3.30.70.270 135 306 3.2E-47 T 11-10-2018 AVL55_17155 a9cb8b603ae5c6275f81725fff62d6d4 326 Gene3D G3DSA:3.40.50.2300 10 134 1.6E-33 T 11-10-2018 AVL55_18410 f9088ae8dee8335f925014618f4285d5 561 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 224 232 - T 11-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 AVL55_18410 f9088ae8dee8335f925014618f4285d5 561 SUPERFAMILY SSF56091 199 434 2.39E-44 T 11-10-2018 AVL55_18410 f9088ae8dee8335f925014618f4285d5 561 Gene3D G3DSA:3.30.470.30 201 434 2.9E-40 T 11-10-2018 AVL55_18410 f9088ae8dee8335f925014618f4285d5 561 SUPERFAMILY SSF50249 440 560 1.71E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_18410 f9088ae8dee8335f925014618f4285d5 561 Pfam PF04679 ATP dependent DNA ligase C terminal region 455 544 3.3E-12 T 11-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AVL55_18410 f9088ae8dee8335f925014618f4285d5 561 Gene3D G3DSA:2.40.50.140 439 561 1.7E-31 T 11-10-2018 AVL55_18410 f9088ae8dee8335f925014618f4285d5 561 Pfam PF04675 DNA ligase N terminus 3 156 2.2E-6 T 11-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 AVL55_18410 f9088ae8dee8335f925014618f4285d5 561 Pfam PF01068 ATP dependent DNA ligase domain 267 434 5.9E-23 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AVL55_18410 f9088ae8dee8335f925014618f4285d5 561 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 559 7.7E-205 T 11-10-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SUPERFAMILY SSF49373 178 250 1.02E-5 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 Pfam PF02369 Bacterial Ig-like domain (group 1) 568 649 1.0E-10 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SUPERFAMILY SSF49373 363 442 4.45E-7 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SUPERFAMILY SSF49373 563 642 5.76E-10 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SUPERFAMILY SSF49373 270 357 1.26E-5 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 Gene3D G3DSA:2.60.40.10 41 146 6.3E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 Gene3D G3DSA:2.60.40.10 552 652 2.0E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 Gene3D G3DSA:2.60.40.10 452 551 6.1E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SUPERFAMILY SSF49373 472 538 1.53E-10 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SMART SM00634 462 545 0.48 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SMART SM00634 155 254 0.11 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SMART SM00634 59 144 0.081 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SMART SM00634 358 452 0.051 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SMART SM00634 556 649 9.1E-10 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 Gene3D G3DSA:2.60.40.10 353 451 2.4E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_08570 9b6cb5c7be19c632a9b0ce5f23c47db9 848 SUPERFAMILY SSF49373 67 144 4.71E-8 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AVL55_17240 38fa4c38cf519854ba944d7b7f35ac02 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.1E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_17240 38fa4c38cf519854ba944d7b7f35ac02 296 SUPERFAMILY SSF53850 94 280 4.25E-18 T 11-10-2018 AVL55_17240 38fa4c38cf519854ba944d7b7f35ac02 296 SUPERFAMILY SSF46785 2 85 3.67E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_17240 38fa4c38cf519854ba944d7b7f35ac02 296 Gene3D G3DSA:1.10.10.10 3 94 1.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_17240 38fa4c38cf519854ba944d7b7f35ac02 296 Gene3D G3DSA:3.40.190.290 95 294 2.7E-9 T 11-10-2018 AVL55_17240 38fa4c38cf519854ba944d7b7f35ac02 296 Pfam PF03466 LysR substrate binding domain 95 279 5.2E-7 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_01480 60b4d6214aada9d9aa78b59f3a28d553 334 SMART SM00354 1 71 1.5E-25 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_01480 60b4d6214aada9d9aa78b59f3a28d553 334 Gene3D G3DSA:3.40.50.2300 64 308 3.5E-79 T 11-10-2018 AVL55_01480 60b4d6214aada9d9aa78b59f3a28d553 334 Gene3D G3DSA:3.40.50.2300 160 289 3.5E-79 T 11-10-2018 AVL55_01480 60b4d6214aada9d9aa78b59f3a28d553 334 SUPERFAMILY SSF47413 1 59 4.59E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_01480 60b4d6214aada9d9aa78b59f3a28d553 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 8.1E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_01480 60b4d6214aada9d9aa78b59f3a28d553 334 Gene3D G3DSA:1.10.260.40 1 58 2.2E-20 T 11-10-2018 AVL55_01480 60b4d6214aada9d9aa78b59f3a28d553 334 SUPERFAMILY SSF53822 63 330 1.1E-80 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_01480 60b4d6214aada9d9aa78b59f3a28d553 334 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.4E-45 T 11-10-2018 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 Gene3D G3DSA:1.10.287.130 268 355 3.9E-18 T 11-10-2018 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 1.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 1.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 1.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 1.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 SUPERFAMILY SSF47384 277 355 1.02E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 Gene3D G3DSA:3.40.50.12740 541 667 3.3E-33 T 11-10-2018 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 SMART SM00388 293 358 7.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 SMART SM00448 542 656 7.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 SMART SM00387 405 520 7.7E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 SUPERFAMILY SSF52172 541 662 6.83E-31 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 SUPERFAMILY SSF55874 347 518 3.54E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 405 519 5.4E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 Gene3D G3DSA:3.30.565.10 357 522 2.0E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 SUPERFAMILY SSF55785 149 270 2.79E-8 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 Gene3D G3DSA:3.30.450.20 154 267 6.0E-13 T 11-10-2018 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 Pfam PF00072 Response regulator receiver domain 544 654 3.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08000 256a8e7bf8d80fb885cde77795d73e25 667 Pfam PF00512 His Kinase A (phospho-acceptor) domain 294 356 3.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_13835 42293b5a0c693b66d37b959b7c7ca03d 161 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 6.6E-66 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AVL55_13835 42293b5a0c693b66d37b959b7c7ca03d 161 SUPERFAMILY SSF46785 2 133 7.88E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_13835 42293b5a0c693b66d37b959b7c7ca03d 161 Gene3D G3DSA:1.10.10.10 1 144 2.0E-55 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_13835 42293b5a0c693b66d37b959b7c7ca03d 161 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.8E-46 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AVL55_13835 42293b5a0c693b66d37b959b7c7ca03d 161 Pfam PF02082 Transcriptional regulator 1 83 2.0E-27 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AVL55_18485 7cf227eb3b27b0cb2f92aa58c985499c 359 TIGRFAM TIGR00109 hemH: ferrochelatase 14 336 4.9E-104 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AVL55_18485 7cf227eb3b27b0cb2f92aa58c985499c 359 Hamap MF_00323 Ferrochelatase [hemH]. 15 336 38.533 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AVL55_18485 7cf227eb3b27b0cb2f92aa58c985499c 359 SUPERFAMILY SSF53800 14 341 9.32E-114 T 11-10-2018 AVL55_18485 7cf227eb3b27b0cb2f92aa58c985499c 359 Gene3D G3DSA:3.40.50.1400 18 336 4.1E-98 T 11-10-2018 AVL55_18485 7cf227eb3b27b0cb2f92aa58c985499c 359 Pfam PF00762 Ferrochelatase 16 335 1.3E-116 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AVL55_18485 7cf227eb3b27b0cb2f92aa58c985499c 359 Gene3D G3DSA:3.40.50.1400 179 317 4.1E-98 T 11-10-2018 AVL55_05550 7c8b62640e8a98b777ba315586306770 298 SUPERFAMILY SSF53850 93 296 1.71E-38 T 11-10-2018 AVL55_05550 7c8b62640e8a98b777ba315586306770 298 Pfam PF03466 LysR substrate binding domain 91 295 6.5E-39 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_05550 7c8b62640e8a98b777ba315586306770 298 Gene3D G3DSA:3.40.190.10 166 267 3.3E-54 T 11-10-2018 AVL55_05550 7c8b62640e8a98b777ba315586306770 298 Gene3D G3DSA:1.10.10.10 6 94 5.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_05550 7c8b62640e8a98b777ba315586306770 298 Gene3D G3DSA:3.40.190.10 95 292 3.3E-54 T 11-10-2018 AVL55_05550 7c8b62640e8a98b777ba315586306770 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_05550 7c8b62640e8a98b777ba315586306770 298 SUPERFAMILY SSF46785 7 86 1.13E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_03275 e2a236dae1b40785e8e36b8020c20545 393 Pfam PF00756 Putative esterase 41 224 6.9E-28 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AVL55_03275 e2a236dae1b40785e8e36b8020c20545 393 SUPERFAMILY SSF48452 308 373 4.49E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_03275 e2a236dae1b40785e8e36b8020c20545 393 Pfam PF14559 Tetratricopeptide repeat 318 369 1.3E-6 T 11-10-2018 AVL55_03275 e2a236dae1b40785e8e36b8020c20545 393 Gene3D G3DSA:1.25.40.10 297 390 7.4E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_03275 e2a236dae1b40785e8e36b8020c20545 393 SMART SM00028 306 339 140.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_03275 e2a236dae1b40785e8e36b8020c20545 393 SMART SM00028 340 373 4.8E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_03275 e2a236dae1b40785e8e36b8020c20545 393 Gene3D G3DSA:3.40.50.1820 32 296 2.6E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_03275 e2a236dae1b40785e8e36b8020c20545 393 SUPERFAMILY SSF53474 29 270 5.91E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 Gene3D G3DSA:3.30.565.10 1 211 6.6E-72 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 604 22.494 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 SUPERFAMILY SSF54211 202 328 6.83E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 328 1.0E-33 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 4.0E-14 T 11-10-2018 AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 SUPERFAMILY SSF55874 2 203 8.91E-54 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 SMART SM01340 211 329 1.4E-47 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 309 4.8E-99 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 AVL55_18520 6cd3da14ef133b4287ed778bb11c6188 619 Gene3D G3DSA:3.30.230.10 216 328 1.6E-33 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 SUPERFAMILY SSF52540 306 576 7.73E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 Pfam PF13538 UvrD-like helicase C-terminal domain 510 555 2.4E-14 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 SMART SM00382 219 358 0.0069 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 Gene3D G3DSA:2.30.30.940 431 510 5.3E-94 T 11-10-2018 AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 Pfam PF13604 AAA domain 207 379 2.8E-40 T 11-10-2018 AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 Gene3D G3DSA:3.40.50.300 202 578 5.3E-94 T 11-10-2018 AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 SUPERFAMILY SSF52540 92 345 2.29E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 Gene3D G3DSA:3.40.50.300 355 572 5.3E-94 T 11-10-2018 AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 Pfam PF14490 Helix-hairpin-helix containing domain 22 120 2.7E-10 T 11-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain AVL55_11895 01b69e0b250e55cdddbdc829655ab4ab 591 Gene3D G3DSA:1.10.10.2220 82 172 8.8E-6 T 11-10-2018 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 Gene3D G3DSA:3.40.120.10 3 154 2.0E-47 T 11-10-2018 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.9E-187 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 SUPERFAMILY SSF53738 156 256 3.1E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 SUPERFAMILY SSF53738 258 365 5.1E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 Gene3D G3DSA:3.40.120.10 257 339 6.8E-61 T 11-10-2018 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 1.0E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.5E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.5E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.5E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 SUPERFAMILY SSF55957 358 447 2.22E-21 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 1.9E-12 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 Gene3D G3DSA:3.30.310.50 370 447 7.1E-24 T 11-10-2018 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 Gene3D G3DSA:3.40.120.10 175 362 6.8E-61 T 11-10-2018 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 46.738 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 1.5E-42 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 SUPERFAMILY SSF53738 2 181 9.42E-48 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09295 e5d778cf2ee57d5c2e3a8c8ba3d66aad 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 1.1E-30 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_10970 2821a57984e81d02cd691649240842d6 274 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 64 190 4.0E-27 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AVL55_10970 2821a57984e81d02cd691649240842d6 274 SUPERFAMILY SSF89392 74 274 1.61E-40 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AVL55_10970 2821a57984e81d02cd691649240842d6 274 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 82 262 7.0E-36 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AVL55_10970 2821a57984e81d02cd691649240842d6 274 Gene3D G3DSA:2.50.20.10 72 274 1.3E-37 T 11-10-2018 AVL55_10970 2821a57984e81d02cd691649240842d6 274 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 57 273 23.985 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AVL55_06345 be137b1d416dee333c662b7a8f6d185d 210 Pfam PF08281 Sigma-70, region 4 136 183 4.6E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_06345 be137b1d416dee333c662b7a8f6d185d 210 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 185 9.1E-20 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_06345 be137b1d416dee333c662b7a8f6d185d 210 SUPERFAMILY SSF88946 31 110 6.67E-10 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_06345 be137b1d416dee333c662b7a8f6d185d 210 Gene3D G3DSA:1.10.1740.10 24 109 9.6E-9 T 11-10-2018 AVL55_06345 be137b1d416dee333c662b7a8f6d185d 210 Gene3D G3DSA:1.10.10.10 114 191 5.1E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_06345 be137b1d416dee333c662b7a8f6d185d 210 Pfam PF04542 Sigma-70 region 2 36 97 3.2E-7 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_06345 be137b1d416dee333c662b7a8f6d185d 210 SUPERFAMILY SSF88659 124 187 3.49E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_11940 3359e7000df089ead4c583dff12455b3 441 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 361 405 2.5E-6 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AVL55_11940 3359e7000df089ead4c583dff12455b3 441 Gene3D G3DSA:3.40.50.10710 204 353 1.3E-137 T 11-10-2018 AVL55_11940 3359e7000df089ead4c583dff12455b3 441 SMART SM00849 1 201 1.2E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_11940 3359e7000df089ead4c583dff12455b3 441 SUPERFAMILY SSF56281 2 420 4.92E-68 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_11940 3359e7000df089ead4c583dff12455b3 441 Pfam PF00753 Metallo-beta-lactamase superfamily 5 160 3.8E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_11940 3359e7000df089ead4c583dff12455b3 441 Gene3D G3DSA:3.60.15.10 1 436 1.3E-137 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 Gene3D G3DSA:1.10.10.10 3 93 1.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 SUPERFAMILY SSF53850 91 292 8.32E-23 T 11-10-2018 AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 Pfam PF03466 LysR substrate binding domain 89 283 1.1E-22 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 8.9E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 Gene3D G3DSA:3.40.190.10 164 266 8.4E-18 T 11-10-2018 AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 SUPERFAMILY SSF46785 4 82 2.45E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_12250 ccf7d537e71d9b3eb40e0b2852e3aa8a 302 Gene3D G3DSA:3.40.190.10 118 279 8.4E-18 T 11-10-2018 AVL55_00640 446ccb970ada97d4b2547042edadae79 311 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 123 9.8E-9 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_00640 446ccb970ada97d4b2547042edadae79 311 Gene3D G3DSA:2.40.420.20 235 310 5.9E-14 T 11-10-2018 AVL55_00640 446ccb970ada97d4b2547042edadae79 311 Gene3D G3DSA:2.40.50.100 124 157 2.0E-6 T 11-10-2018 AVL55_00640 446ccb970ada97d4b2547042edadae79 311 Gene3D G3DSA:2.40.420.20 61 71 1.6E-9 T 11-10-2018 AVL55_00640 446ccb970ada97d4b2547042edadae79 311 Gene3D G3DSA:2.40.50.100 86 119 1.6E-9 T 11-10-2018 AVL55_00640 446ccb970ada97d4b2547042edadae79 311 SUPERFAMILY SSF51230 79 150 1.96E-11 T 11-10-2018 IPR011053 Single hybrid motif AVL55_00640 446ccb970ada97d4b2547042edadae79 311 Pfam PF13437 HlyD family secretion protein 128 206 1.2E-6 T 11-10-2018 AVL55_00640 446ccb970ada97d4b2547042edadae79 311 Gene3D G3DSA:2.40.30.170 158 202 2.0E-6 T 11-10-2018 AVL55_00640 446ccb970ada97d4b2547042edadae79 311 Gene3D G3DSA:2.40.30.170 72 85 1.6E-9 T 11-10-2018 AVL55_16730 6da34588bfb18f1eb4b64a8848267dd7 192 Gene3D G3DSA:3.40.470.10 4 192 1.1E-57 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_16730 6da34588bfb18f1eb4b64a8848267dd7 192 SMART SM00986 31 183 1.4E-22 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_16730 6da34588bfb18f1eb4b64a8848267dd7 192 SMART SM00987 31 183 1.4E-22 T 11-10-2018 AVL55_16730 6da34588bfb18f1eb4b64a8848267dd7 192 SUPERFAMILY SSF52141 9 190 6.87E-47 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_16730 6da34588bfb18f1eb4b64a8848267dd7 192 Pfam PF03167 Uracil DNA glycosylase superfamily 36 182 9.3E-24 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_00255 6a9a64c03fa28446d6e994a8dc66a000 229 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 17 215 1.5E-40 T 11-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB AVL55_00255 6a9a64c03fa28446d6e994a8dc66a000 229 SUPERFAMILY SSF159270 26 218 4.84E-40 T 11-10-2018 IPR023373 YmcC-like superfamily AVL55_00255 6a9a64c03fa28446d6e994a8dc66a000 229 Gene3D G3DSA:2.40.360.10 21 225 3.4E-40 T 11-10-2018 IPR023373 YmcC-like superfamily AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 SMART SM00878 336 443 1.4E-57 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 Pfam PF00364 Biotin-requiring enzyme 599 662 3.0E-12 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 Gene3D G3DSA:3.30.470.130 1 451 4.5E-198 T 11-10-2018 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 SUPERFAMILY SSF56059 83 348 4.95E-67 T 11-10-2018 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 3.0E-73 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.3E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 SUPERFAMILY SSF52440 1 113 1.94E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 621 638 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 SUPERFAMILY SSF51230 591 663 3.4E-18 T 11-10-2018 IPR011053 Single hybrid motif AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 Gene3D G3DSA:2.40.50.100 600 664 1.5E-17 T 11-10-2018 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 SUPERFAMILY SSF51246 331 449 3.3E-41 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AVL55_08400 160fe2b1f9c93577a04a2fb057e4d691 672 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 1.8E-38 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_19340 7dfe4ac0c6e5716a0e48910f640ed189 519 Gene3D G3DSA:3.30.450.90 112 244 6.9E-54 T 11-10-2018 AVL55_19340 7dfe4ac0c6e5716a0e48910f640ed189 519 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 34 516 2.4E-220 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AVL55_19340 7dfe4ac0c6e5716a0e48910f640ed189 519 SUPERFAMILY SSF52540 128 516 7.43E-104 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_19340 7dfe4ac0c6e5716a0e48910f640ed189 519 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 339 353 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AVL55_19340 7dfe4ac0c6e5716a0e48910f640ed189 519 Gene3D G3DSA:3.30.300.160 20 111 1.5E-18 T 11-10-2018 AVL55_19340 7dfe4ac0c6e5716a0e48910f640ed189 519 SMART SM00382 272 395 0.0019 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_19340 7dfe4ac0c6e5716a0e48910f640ed189 519 SUPERFAMILY SSF160246 35 98 1.44E-14 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AVL55_19340 7dfe4ac0c6e5716a0e48910f640ed189 519 Gene3D G3DSA:3.40.50.300 245 519 1.1E-120 T 11-10-2018 AVL55_19340 7dfe4ac0c6e5716a0e48910f640ed189 519 Pfam PF00437 Type II/IV secretion system protein 146 411 1.4E-92 T 11-10-2018 IPR001482 Type II/IV secretion system protein AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 Gene3D G3DSA:3.30.565.10 195 353 3.8E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 SMART SM00387 235 354 4.5E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 Gene3D G3DSA:1.10.287.130 136 189 1.7E-14 T 11-10-2018 AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 134 189 4.5E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 SMART SM00388 132 196 1.5E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 Gene3D G3DSA:3.30.450.20 4 115 1.8E-20 T 11-10-2018 AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 SMART SM00091 6 74 4.4E-6 T 11-10-2018 IPR000014 PAS domain AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 352 1.1E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 SUPERFAMILY SSF55785 9 107 8.72E-12 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 SUPERFAMILY SSF55874 199 352 2.1E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 SUPERFAMILY SSF47384 132 188 1.47E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_16010 a3881c2c2e75dc0f211198700040be5d 361 Pfam PF00989 PAS fold 8 106 1.3E-9 T 11-10-2018 IPR013767 PAS fold GO:0006355 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 Gene3D G3DSA:3.30.420.10 1 158 1.4E-51 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 1.5E-40 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 1.5E-40 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 1.5E-40 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.5E-40 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 1.5E-40 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 47.673 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 4.2E-66 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 1.9E-59 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AVL55_06805 dc0b8b446062eebbbf18f2ac80fd354b 172 SUPERFAMILY SSF53098 1 155 1.63E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_11560 8cb2347a21d5d65a59b3e1c0db0d40fa 294 SUPERFAMILY SSF50249 159 224 3.27E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_11560 8cb2347a21d5d65a59b3e1c0db0d40fa 294 PIRSF PIRSF012524 1 294 4.4E-56 T 11-10-2018 IPR014464 Conserved virulence factor B AVL55_11560 8cb2347a21d5d65a59b3e1c0db0d40fa 294 Pfam PF13509 S1 domain 4 81 3.4E-12 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain AVL55_11560 8cb2347a21d5d65a59b3e1c0db0d40fa 294 Gene3D G3DSA:1.10.10.10 232 292 8.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 3.7E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 SUPERFAMILY SSF54211 476 596 1.34E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 SMART SM00889 477 595 1.9E-62 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 SUPERFAMILY SSF50447 261 399 5.52E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 SUPERFAMILY SSF52540 3 278 1.38E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Pfam PF00009 Elongation factor Tu GTP binding domain 7 278 1.4E-59 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Pfam PF14492 Elongation Factor G, domain II 401 475 5.5E-30 T 11-10-2018 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Gene3D G3DSA:3.30.70.870 403 480 2.4E-27 T 11-10-2018 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Gene3D G3DSA:3.30.230.10 481 684 1.1E-83 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 103.466 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Gene3D G3DSA:3.40.50.300 1 290 1.5E-100 T 11-10-2018 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Gene3D G3DSA:2.40.30.10 291 402 5.8E-38 T 11-10-2018 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 175 2.8E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Pfam PF00679 Elongation factor G C-terminus 598 683 9.2E-28 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 1.4E-295 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 3.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 3.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 3.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 SUPERFAMILY SSF54980 600 691 2.41E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Pfam PF03764 Elongation factor G, domain IV 476 594 3.2E-44 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 Gene3D G3DSA:3.30.70.240 601 671 1.1E-83 T 11-10-2018 AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 SUPERFAMILY SSF54980 401 478 3.09E-21 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_07695 2370035fcf1fbfc5062b1a7b48241dc0 695 SMART SM00838 597 684 2.6E-43 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 SUPERFAMILY SSF51735 15 189 1.26E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 Gene3D G3DSA:1.10.1040.10 200 343 2.6E-52 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 SUPERFAMILY SSF48179 190 342 7.31E-57 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 191 330 3.1E-52 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 67 94 9.6E-41 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 184 208 9.6E-41 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 249 266 9.6E-41 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 17 34 9.6E-41 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 143 163 9.6E-41 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 209 233 9.6E-41 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 PIRSF PIRSF000114 7 343 1.0E-100 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 Gene3D G3DSA:3.40.50.720 3 198 9.0E-54 T 11-10-2018 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 199 220 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 14 169 8.4E-49 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_02060 80d07e3a8016531d1b4552a7d2c86422 343 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 13 333 37.871 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 Gene3D G3DSA:3.40.50.2300 1053 1171 1.1E-13 T 11-10-2018 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 Gene3D G3DSA:3.30.450.20 594 722 1.7E-7 T 11-10-2018 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 SMART SM00448 1055 1166 0.0025 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 Pfam PF00072 Response regulator receiver domain 1058 1165 1.8E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 Gene3D G3DSA:1.10.287.130 723 819 5.9E-13 T 11-10-2018 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 Pfam PF00474 Sodium:solute symporter family 47 442 2.7E-7 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 Pfam PF12860 PAS fold 613 722 3.6E-35 T 11-10-2018 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 SUPERFAMILY SSF52172 1054 1169 1.01E-12 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 Gene3D G3DSA:1.20.1730.10 43 523 3.8E-12 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 SUPERFAMILY SSF55874 812 976 3.54E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 SMART SM00387 865 979 2.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 SMART SM00388 756 821 2.9E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 Gene3D G3DSA:3.30.565.10 821 981 1.3E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 SUPERFAMILY SSF47384 742 821 1.16E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 866 975 7.6E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 PRINTS PR00344 Bacterial sensor protein C-terminal signature 906 920 1.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 PRINTS PR00344 Bacterial sensor protein C-terminal signature 963 976 1.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 PRINTS PR00344 Bacterial sensor protein C-terminal signature 924 934 1.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_07405 fe1c9b08b988bd28793a66f3f8eb4635 1171 PRINTS PR00344 Bacterial sensor protein C-terminal signature 939 957 1.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 Gene3D G3DSA:3.90.1170.10 1 136 3.4E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 SUPERFAMILY SSF54686 3 133 5.1E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.77 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.3E-45 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.3E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.3E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.3E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.3E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01625 00b9c2622f22e7fca6e52a37ad8df322 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 8.6E-57 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 486 9.0E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 SUPERFAMILY SSF55874 312 486 1.83E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 Pfam PF05227 CHASE3 domain 47 171 3.1E-21 T 11-10-2018 IPR007891 CHASE3 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 Gene3D G3DSA:1.20.1440.210 47 174 6.0E-23 T 11-10-2018 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 Gene3D G3DSA:1.10.287.130 218 320 5.0E-14 T 11-10-2018 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 SMART SM00388 254 322 2.6E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 319 3.3E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 7.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 443 7.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 7.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 7.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 SMART SM00387 363 488 7.3E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 Gene3D G3DSA:3.30.565.10 324 489 2.3E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_12000 8aa0e6334b18fc1ec33bf96f1490d677 504 SUPERFAMILY SSF47384 240 320 8.63E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 Gene3D G3DSA:2.10.109.10 86 208 5.5E-43 T 11-10-2018 AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 Gene3D G3DSA:1.10.10.10 1 69 7.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 SUPERFAMILY SSF46785 3 68 4.46E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 Pfam PF00717 Peptidase S24-like 120 186 3.1E-14 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 Pfam PF01726 LexA DNA binding domain 1 65 5.5E-29 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 7.1E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 7.1E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 7.1E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 Hamap MF_00015 LexA repressor [lexA]. 3 205 31.061 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 SUPERFAMILY SSF51306 82 204 8.5E-35 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AVL55_19620 81def558b3cc64d0ffa652a4f10f02f9 208 TIGRFAM TIGR00498 lexA: repressor LexA 1 205 6.6E-77 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AVL55_19690 6509b9ff1424bc577b39473a077ae982 168 Gene3D G3DSA:1.10.1740.10 2 87 5.2E-13 T 11-10-2018 AVL55_19690 6509b9ff1424bc577b39473a077ae982 168 SUPERFAMILY SSF88946 5 83 5.49E-14 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_19690 6509b9ff1424bc577b39473a077ae982 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 161 2.7E-24 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_19690 6509b9ff1424bc577b39473a077ae982 168 SUPERFAMILY SSF88659 88 161 5.45E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_19690 6509b9ff1424bc577b39473a077ae982 168 Gene3D G3DSA:1.10.10.10 92 165 2.4E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_19690 6509b9ff1424bc577b39473a077ae982 168 Pfam PF04542 Sigma-70 region 2 9 73 2.9E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_19690 6509b9ff1424bc577b39473a077ae982 168 Pfam PF08281 Sigma-70, region 4 110 159 5.0E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_04140 d88ccab92dfefca7f7dc76935a3a26b4 419 TIGRFAM TIGR01224 hutI: imidazolonepropionase 78 417 1.4E-132 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04140 d88ccab92dfefca7f7dc76935a3a26b4 419 Gene3D G3DSA:2.30.40.10 11 416 5.0E-153 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_04140 d88ccab92dfefca7f7dc76935a3a26b4 419 Pfam PF01979 Amidohydrolase family 79 418 5.0E-17 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AVL55_04140 d88ccab92dfefca7f7dc76935a3a26b4 419 SUPERFAMILY SSF51556 81 378 9.61E-80 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_04140 d88ccab92dfefca7f7dc76935a3a26b4 419 Gene3D G3DSA:3.20.20.140 82 379 5.0E-153 T 11-10-2018 AVL55_04140 d88ccab92dfefca7f7dc76935a3a26b4 419 Hamap MF_00372 Imidazolonepropionase [hutI]. 6 419 39.169 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04140 d88ccab92dfefca7f7dc76935a3a26b4 419 SUPERFAMILY SSF51338 5 418 9.04E-22 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_07285 42fcb1f5fa4ab638ce175bc2e7541e66 578 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 200 9.8E-18 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_07285 42fcb1f5fa4ab638ce175bc2e7541e66 578 PRINTS PR00095 Anthranilate synthase component I signature 506 520 1.6E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_07285 42fcb1f5fa4ab638ce175bc2e7541e66 578 PRINTS PR00095 Anthranilate synthase component I signature 397 410 1.6E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_07285 42fcb1f5fa4ab638ce175bc2e7541e66 578 PRINTS PR00095 Anthranilate synthase component I signature 491 505 1.6E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_07285 42fcb1f5fa4ab638ce175bc2e7541e66 578 PRINTS PR00095 Anthranilate synthase component I signature 411 424 1.6E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_07285 42fcb1f5fa4ab638ce175bc2e7541e66 578 SUPERFAMILY SSF56322 16 558 2.09E-145 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AVL55_07285 42fcb1f5fa4ab638ce175bc2e7541e66 578 Pfam PF00425 chorismate binding enzyme 289 549 7.8E-84 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AVL55_07285 42fcb1f5fa4ab638ce175bc2e7541e66 578 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 258 559 3.3E-156 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 Gene3D G3DSA:3.40.50.300 1 203 3.4E-70 T 11-10-2018 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.7E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 151 9.6E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.6E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 SUPERFAMILY SSF52540 9 226 4.6E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 Gene3D G3DSA:2.40.30.10 338 393 1.2E-29 T 11-10-2018 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.702 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 Gene3D G3DSA:2.40.30.10 206 334 2.0E-53 T 11-10-2018 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 SUPERFAMILY SSF50447 205 301 2.95E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 SUPERFAMILY SSF50465 298 393 8.06E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.1E-234 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.9E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18155 72d7cdb3271cb826df28263f5e4ff93f 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AVL55_05990 bb9ee252fac78cf5ce6ec972e23ef465 641 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 210 358 1.0E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_05990 bb9ee252fac78cf5ce6ec972e23ef465 641 Pfam PF11398 Protein of unknown function (DUF2813) 1 136 1.2E-12 T 11-10-2018 IPR022602 Protein of unknown function DUF2813 AVL55_05990 bb9ee252fac78cf5ce6ec972e23ef465 641 SUPERFAMILY SSF52540 1 370 5.34E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05990 bb9ee252fac78cf5ce6ec972e23ef465 641 Gene3D G3DSA:3.40.50.300 1 397 4.1E-28 T 11-10-2018 AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 Pfam PF03412 Peptidase C39 family 19 147 5.4E-35 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 SMART SM00382 558 733 2.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 Gene3D G3DSA:3.40.50.300 522 749 5.5E-61 T 11-10-2018 AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 Gene3D G3DSA:1.20.1560.10 160 474 5.9E-61 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 SUPERFAMILY SSF52540 530 734 1.01E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 SUPERFAMILY SSF90123 157 468 1.23E-52 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 Pfam PF00664 ABC transporter transmembrane region 175 441 8.9E-34 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 Pfam PF00005 ABC transporter 550 688 2.4E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 ProSitePatterns PS00211 ABC transporters family signature. 661 675 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_17795 d32e12c712ba0cd5a86e3dea4c992dac 755 Gene3D G3DSA:3.90.70.10 10 155 3.7E-40 T 11-10-2018 AVL55_09500 ebffb76644a03a7e80960468e6e35922 582 Pfam PF00664 ABC transporter transmembrane region 29 288 3.8E-52 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AVL55_09500 ebffb76644a03a7e80960468e6e35922 582 SUPERFAMILY SSF90123 8 324 4.58E-74 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_09500 ebffb76644a03a7e80960468e6e35922 582 Gene3D G3DSA:1.20.1560.10 1 326 5.4E-79 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_09500 ebffb76644a03a7e80960468e6e35922 582 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_09500 ebffb76644a03a7e80960468e6e35922 582 SMART SM00382 366 553 2.1E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_09500 ebffb76644a03a7e80960468e6e35922 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 580 1.6E-224 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AVL55_09500 ebffb76644a03a7e80960468e6e35922 582 Gene3D G3DSA:3.40.50.300 327 579 5.2E-93 T 11-10-2018 AVL55_09500 ebffb76644a03a7e80960468e6e35922 582 Pfam PF00005 ABC transporter 357 507 2.2E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_09500 ebffb76644a03a7e80960468e6e35922 582 SUPERFAMILY SSF52540 330 578 3.63E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08510 9581755a0dd468f6c514be5dcad73b71 397 Gene3D G3DSA:2.30.130.10 1 72 2.1E-29 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AVL55_08510 9581755a0dd468f6c514be5dcad73b71 397 Gene3D G3DSA:3.40.50.150 181 395 2.4E-67 T 11-10-2018 AVL55_08510 9581755a0dd468f6c514be5dcad73b71 397 SMART SM00359 3 88 8.7E-12 T 11-10-2018 IPR002478 PUA domain GO:0003723 AVL55_08510 9581755a0dd468f6c514be5dcad73b71 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 395 68.923 T 11-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 AVL55_08510 9581755a0dd468f6c514be5dcad73b71 397 SUPERFAMILY SSF88697 4 72 1.21E-16 T 11-10-2018 IPR015947 PUA-like superfamily AVL55_08510 9581755a0dd468f6c514be5dcad73b71 397 Gene3D G3DSA:3.30.750.80 73 180 5.8E-35 T 11-10-2018 AVL55_08510 9581755a0dd468f6c514be5dcad73b71 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 170 340 2.9E-26 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AVL55_08510 9581755a0dd468f6c514be5dcad73b71 397 SUPERFAMILY SSF53335 79 391 3.0E-69 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 281 1.3E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 SMART SM00448 457 569 0.0035 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 SMART SM00448 590 702 5.7E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 3.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 3.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 3.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 440 3.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 SMART SM00388 218 281 1.9E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 29 97 1.7E-13 T 11-10-2018 IPR029095 NarX-like, N-terminal AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 Gene3D G3DSA:3.30.565.10 280 445 9.1E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 SMART SM00387 328 443 3.1E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 Pfam PF00072 Response regulator receiver domain 461 566 1.1E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 Pfam PF00072 Response regulator receiver domain 592 700 1.4E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 440 1.0E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 SUPERFAMILY SSF52172 588 706 1.28E-36 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 Gene3D G3DSA:3.40.50.12740 589 706 4.5E-38 T 11-10-2018 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 Gene3D G3DSA:1.10.287.130 185 279 1.7E-22 T 11-10-2018 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 Gene3D G3DSA:3.40.50.2300 451 586 8.7E-15 T 11-10-2018 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 SUPERFAMILY SSF47384 207 282 1.14E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 SUPERFAMILY SSF52172 456 574 1.57E-14 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_12215 2a39d567b291b95f9cf23f260d35e611 707 SUPERFAMILY SSF55874 270 439 6.16E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 9.9E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 9.9E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 9.9E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 9.9E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 Gene3D G3DSA:3.40.50.1370 136 303 1.3E-102 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 SUPERFAMILY SSF53671 2 317 4.84E-87 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 7 315 5.9E-93 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 314 2.7E-23 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.9E-47 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 5.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 5.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 5.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 5.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 5.9E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_01800 05a3397eef312f5edf53e1e78c2251f5 337 Gene3D G3DSA:3.40.50.1370 8 312 1.3E-102 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 458 5.6E-23 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 Gene3D G3DSA:3.50.50.60 147 242 9.2E-10 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 SUPERFAMILY SSF51971 145 400 8.24E-67 T 11-10-2018 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 Gene3D G3DSA:1.10.1060.10 12 146 6.3E-34 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 134 2.0E-37 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 Gene3D G3DSA:3.50.50.60 248 399 1.4E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 SUPERFAMILY SSF46548 6 157 3.87E-41 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 7.2E-246 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.9E-34 T 11-10-2018 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 1.9E-34 T 11-10-2018 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 PRINTS PR00419 Adrenodoxin reductase family signature 323 336 1.9E-34 T 11-10-2018 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.9E-34 T 11-10-2018 AVL55_15790 0e18e30c1f79813456bae96ff0d52d1d 471 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.9E-34 T 11-10-2018 AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SUPERFAMILY SSF141868 1255 1506 7.59E-86 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Gene3D G3DSA:3.30.450.20 830 948 2.2E-17 T 11-10-2018 AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Pfam PF13426 PAS domain 972 1070 2.4E-12 T 11-10-2018 IPR000014 PAS domain AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1081 1238 2.3E-34 T 11-10-2018 IPR000160 GGDEF domain AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Gene3D G3DSA:3.20.20.450 1254 1506 2.5E-96 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SMART SM00267 1072 1240 1.7E-54 T 11-10-2018 IPR000160 GGDEF domain AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SMART SM00052 1250 1496 1.6E-107 T 11-10-2018 IPR001633 EAL domain AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SUPERFAMILY SSF55785 864 956 2.62E-8 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1083 1235 9.0E-42 T 11-10-2018 IPR000160 GGDEF domain AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Pfam PF07495 Y_Y_Y domain 735 793 3.7E-12 T 11-10-2018 IPR011123 Two component regulator three Y AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Pfam PF00563 EAL domain 1258 1491 1.0E-69 T 11-10-2018 IPR001633 EAL domain AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SUPERFAMILY SSF63829 63 293 1.26E-13 T 11-10-2018 AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Gene3D G3DSA:2.130.10.10 457 661 2.8E-11 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Pfam PF07494 Two component regulator propeller 87 109 4.0E-4 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Gene3D G3DSA:2.130.10.10 31 351 9.7E-55 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Pfam PF08447 PAS fold 873 946 1.3E-11 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Gene3D G3DSA:2.60.40.10 671 807 6.7E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 957 1079 5.2E-15 T 11-10-2018 IPR000014 PAS domain AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SUPERFAMILY SSF50998 187 604 1.41E-8 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Gene3D G3DSA:3.30.450.20 955 1075 1.9E-25 T 11-10-2018 AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SMART SM00086 1030 1072 3.3E-6 T 11-10-2018 IPR001610 PAC motif AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SMART SM00086 910 953 220.0 T 11-10-2018 IPR001610 PAC motif AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SUPERFAMILY SSF55785 967 1070 6.11E-19 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 SUPERFAMILY SSF55073 1088 1242 3.06E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_06600 3e9316bebf25cf2e08657319ce27d52d 1516 Gene3D G3DSA:3.30.70.270 1078 1253 2.1E-55 T 11-10-2018 AVL55_07655 7f0c5d4f6ae2daa6459da2c5abe5aa3c 520 Pfam PF00072 Response regulator receiver domain 24 134 2.9E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07655 7f0c5d4f6ae2daa6459da2c5abe5aa3c 520 SUPERFAMILY SSF52172 17 152 2.56E-13 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_07655 7f0c5d4f6ae2daa6459da2c5abe5aa3c 520 SMART SM00448 22 144 0.0077 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07655 7f0c5d4f6ae2daa6459da2c5abe5aa3c 520 Pfam PF01966 HD domain 350 467 3.6E-17 T 11-10-2018 IPR006674 HD domain AVL55_07655 7f0c5d4f6ae2daa6459da2c5abe5aa3c 520 SUPERFAMILY SSF109604 348 505 1.73E-31 T 11-10-2018 AVL55_07655 7f0c5d4f6ae2daa6459da2c5abe5aa3c 520 Gene3D G3DSA:1.10.3210.10 319 520 5.4E-60 T 11-10-2018 AVL55_07655 7f0c5d4f6ae2daa6459da2c5abe5aa3c 520 Gene3D G3DSA:3.40.50.2300 22 168 8.8E-15 T 11-10-2018 AVL55_07655 7f0c5d4f6ae2daa6459da2c5abe5aa3c 520 Pfam PF11849 Domain of unknown function (DUF3369) 144 319 3.5E-46 T 11-10-2018 IPR021800 Domain of unknown function DUF3369 AVL55_09300 4da5e73c691db5ea92249b08e2b20060 232 Pfam PF00121 Triosephosphate isomerase 1 228 4.8E-77 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_09300 4da5e73c691db5ea92249b08e2b20060 232 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 222 1.1E-56 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_09300 4da5e73c691db5ea92249b08e2b20060 232 ProSitePatterns PS00171 Triosephosphate isomerase active site. 147 157 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_09300 4da5e73c691db5ea92249b08e2b20060 232 SUPERFAMILY SSF51351 1 230 2.75E-80 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_09300 4da5e73c691db5ea92249b08e2b20060 232 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 230 52.446 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_09300 4da5e73c691db5ea92249b08e2b20060 232 Gene3D G3DSA:3.20.20.70 1 232 9.9E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_08685 c684533b0850c5d4bed2773a4ea14df0 79 Gene3D G3DSA:1.10.1200.10 1 75 4.3E-30 T 11-10-2018 IPR036736 ACP-like superfamily AVL55_08685 c684533b0850c5d4bed2773a4ea14df0 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.1E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AVL55_08685 c684533b0850c5d4bed2773a4ea14df0 79 SUPERFAMILY SSF47336 2 76 7.46E-24 T 11-10-2018 IPR036736 ACP-like superfamily AVL55_08685 c684533b0850c5d4bed2773a4ea14df0 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 23.101 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AVL55_08685 c684533b0850c5d4bed2773a4ea14df0 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AVL55_08685 c684533b0850c5d4bed2773a4ea14df0 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 3.4E-37 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AVL55_01695 83bffdbfcc57119c6120299ad684dfe4 217 SUPERFAMILY SSF55144 58 200 9.77E-32 T 11-10-2018 IPR009097 Cyclic phosphodiesterase AVL55_01695 83bffdbfcc57119c6120299ad684dfe4 217 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 200 19.426 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AVL55_01695 83bffdbfcc57119c6120299ad684dfe4 217 Pfam PF02834 LigT like Phosphoesterase 118 192 4.0E-5 T 11-10-2018 IPR014051 Phosphoesterase, HXTX AVL55_01695 83bffdbfcc57119c6120299ad684dfe4 217 Pfam PF02834 LigT like Phosphoesterase 55 110 7.6E-8 T 11-10-2018 IPR014051 Phosphoesterase, HXTX AVL55_01695 83bffdbfcc57119c6120299ad684dfe4 217 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 61 200 9.1E-29 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AVL55_01695 83bffdbfcc57119c6120299ad684dfe4 217 Gene3D G3DSA:3.90.1140.10 42 201 1.2E-33 T 11-10-2018 AVL55_04640 d873ce5f6464ed20ababc1554f59161b 121 Pfam PF11399 Protein of unknown function (DUF3192) 17 118 1.2E-39 T 11-10-2018 IPR021534 Protein of unknown function DUF3192 AVL55_19470 664ad51b75b43b63519a053add6f6f53 370 Pfam PF05359 Domain of Unknown Function (DUF748) 136 273 5.3E-17 T 11-10-2018 IPR008023 Protein of unknown function DUF748 AVL55_01250 210cfa9ca6a5f735a8903e73d5c23583 117 SUPERFAMILY SSF49503 12 116 8.42E-19 T 11-10-2018 IPR008972 Cupredoxin AVL55_01250 210cfa9ca6a5f735a8903e73d5c23583 117 Pfam PF13473 Cupredoxin-like domain 12 116 1.7E-27 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain AVL55_01250 210cfa9ca6a5f735a8903e73d5c23583 117 Gene3D G3DSA:2.60.40.420 22 117 1.3E-23 T 11-10-2018 IPR008972 Cupredoxin AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Gene3D G3DSA:3.30.70.1430 42 134 3.3E-115 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 SUPERFAMILY SSF82693 149 331 3.92E-20 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Gene3D G3DSA:3.30.70.1440 706 909 1.3E-133 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 SUPERFAMILY SSF82866 842 1084 5.75E-40 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 SUPERFAMILY SSF82866 297 539 3.4E-36 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Gene3D G3DSA:1.20.1640.10 549 1076 1.3E-133 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Pfam PF00873 AcrB/AcrD/AcrF family 6 1080 4.5E-228 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Gene3D G3DSA:1.20.1640.10 468 548 1.3E-133 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 SUPERFAMILY SSF82693 46 128 2.14E-21 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Gene3D G3DSA:3.30.70.1430 603 705 1.3E-133 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Gene3D G3DSA:3.30.2090.10 185 278 3.3E-115 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Gene3D G3DSA:1.20.1640.10 13 434 3.3E-115 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Gene3D G3DSA:3.30.70.1320 135 332 3.3E-115 T 11-10-2018 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 SUPERFAMILY SSF82714 188 270 1.09E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 Gene3D G3DSA:3.30.2090.10 757 845 1.3E-133 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 5.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 5.4E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15300 33d3a40589e2d3e139aab947fad48500 1085 SUPERFAMILY SSF82714 757 841 6.8E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_12570 1a0346478e4bef877535d6fecc864769 270 Gene3D G3DSA:3.40.190.10 29 245 7.6E-14 T 11-10-2018 AVL55_12570 1a0346478e4bef877535d6fecc864769 270 Gene3D G3DSA:3.40.190.10 119 217 7.6E-14 T 11-10-2018 AVL55_12570 1a0346478e4bef877535d6fecc864769 270 SUPERFAMILY SSF53850 33 262 4.98E-19 T 11-10-2018 AVL55_12570 1a0346478e4bef877535d6fecc864769 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 249 2.1E-6 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_09925 c109043e4fa6fc9c260437f160a68db4 724 Pfam PF13604 AAA domain 345 519 2.0E-41 T 11-10-2018 AVL55_09925 c109043e4fa6fc9c260437f160a68db4 724 SUPERFAMILY SSF52540 448 722 1.14E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09925 c109043e4fa6fc9c260437f160a68db4 724 Gene3D G3DSA:3.40.50.300 497 712 4.2E-90 T 11-10-2018 AVL55_09925 c109043e4fa6fc9c260437f160a68db4 724 SUPERFAMILY SSF52540 230 485 6.4E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09925 c109043e4fa6fc9c260437f160a68db4 724 SMART SM00382 358 493 0.0025 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_09925 c109043e4fa6fc9c260437f160a68db4 724 Gene3D G3DSA:2.30.30.940 572 650 4.2E-90 T 11-10-2018 AVL55_09925 c109043e4fa6fc9c260437f160a68db4 724 Gene3D G3DSA:3.40.50.300 342 717 4.2E-90 T 11-10-2018 AVL55_09925 c109043e4fa6fc9c260437f160a68db4 724 Pfam PF13538 UvrD-like helicase C-terminal domain 650 695 3.9E-12 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain AVL55_09925 c109043e4fa6fc9c260437f160a68db4 724 Pfam PF14490 Helix-hairpin-helix containing domain 174 258 7.8E-15 T 11-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 SUPERFAMILY SSF53623 109 360 2.62E-64 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 8 516 32.205 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 SUPERFAMILY SSF53244 364 516 1.16E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 Pfam PF08245 Mur ligase middle domain 118 343 7.1E-45 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 Gene3D G3DSA:3.40.1390.10 7 107 8.8E-26 T 11-10-2018 AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 515 6.3E-148 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 Gene3D G3DSA:3.40.1190.10 109 367 8.8E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 Pfam PF02875 Mur ligase family, glutamate ligase domain 364 449 1.5E-19 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 Gene3D G3DSA:3.90.190.20 374 521 1.4E-53 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 SUPERFAMILY SSF63418 12 107 1.23E-18 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AVL55_15260 93e588d23212b24657020c86d4c10e0a 521 Pfam PF01225 Mur ligase family, catalytic domain 26 106 2.3E-13 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AVL55_11800 cea993a68c2895bee41ada81a5a55c53 149 Gene3D G3DSA:3.20.80.10 2 149 2.2E-38 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AVL55_11800 cea993a68c2895bee41ada81a5a55c53 149 Pfam PF14526 Integron-associated effector binding protein 13 148 3.8E-17 T 11-10-2018 IPR029441 Integron-associated effector binding protein AVL55_11800 cea993a68c2895bee41ada81a5a55c53 149 SMART SM00871 8 149 4.3E-15 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding AVL55_11800 cea993a68c2895bee41ada81a5a55c53 149 SUPERFAMILY SSF55136 18 149 9.07E-16 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AVL55_12750 73cb99acfbca4696768906c6026777d2 917 SUPERFAMILY SSF63411 266 450 2.0E-23 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_12750 73cb99acfbca4696768906c6026777d2 917 SUPERFAMILY SSF63411 479 687 2.67E-48 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_12750 73cb99acfbca4696768906c6026777d2 917 SUPERFAMILY SSF63411 36 244 4.95E-53 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_12750 73cb99acfbca4696768906c6026777d2 917 Gene3D G3DSA:3.30.830.10 483 693 5.0E-50 T 11-10-2018 AVL55_12750 73cb99acfbca4696768906c6026777d2 917 SUPERFAMILY SSF63411 711 903 3.33E-29 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_12750 73cb99acfbca4696768906c6026777d2 917 Gene3D G3DSA:3.30.830.10 261 456 1.0E-27 T 11-10-2018 AVL55_12750 73cb99acfbca4696768906c6026777d2 917 Pfam PF00675 Insulinase (Peptidase family M16) 492 615 1.4E-15 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AVL55_12750 73cb99acfbca4696768906c6026777d2 917 Pfam PF00675 Insulinase (Peptidase family M16) 49 177 2.1E-15 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AVL55_12750 73cb99acfbca4696768906c6026777d2 917 Gene3D G3DSA:3.30.830.10 33 255 3.5E-64 T 11-10-2018 AVL55_12750 73cb99acfbca4696768906c6026777d2 917 Gene3D G3DSA:3.30.830.10 704 899 1.2E-34 T 11-10-2018 AVL55_12750 73cb99acfbca4696768906c6026777d2 917 Pfam PF05193 Peptidase M16 inactive domain 648 824 1.2E-24 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AVL55_12750 73cb99acfbca4696768906c6026777d2 917 Pfam PF05193 Peptidase M16 inactive domain 205 376 2.4E-23 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AVL55_13945 7993b1ec730f3eb002c434fff73266cb 454 Pfam PF07143 CrtC N-terminal lipocalin domain 86 315 8.8E-46 T 11-10-2018 IPR010791 AttH domain AVL55_13945 7993b1ec730f3eb002c434fff73266cb 454 Gene3D G3DSA:2.40.370.10 319 454 8.0E-29 T 11-10-2018 IPR023374 AttH-like domain superfamily AVL55_13945 7993b1ec730f3eb002c434fff73266cb 454 Gene3D G3DSA:2.40.370.10 73 229 1.6E-29 T 11-10-2018 IPR023374 AttH-like domain superfamily AVL55_13945 7993b1ec730f3eb002c434fff73266cb 454 SUPERFAMILY SSF159245 62 454 6.02E-83 T 11-10-2018 AVL55_13945 7993b1ec730f3eb002c434fff73266cb 454 Pfam PF17186 Lipocalin-like domain 320 454 7.1E-35 T 11-10-2018 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 135 3.8E-22 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 Gene3D G3DSA:1.20.1330.10 39 160 1.2E-39 T 11-10-2018 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 Gene3D G3DSA:1.20.1330.10 173 224 1.8E-23 T 11-10-2018 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 SUPERFAMILY SSF64518 9 264 1.96E-60 T 11-10-2018 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 Gene3D G3DSA:2.170.280.10 161 172 1.8E-23 T 11-10-2018 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 PRINTS PR00207 Flagellin signature 105 128 2.9E-15 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 PRINTS PR00207 Flagellin signature 31 48 2.9E-15 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 PRINTS PR00207 Flagellin signature 70 89 2.9E-15 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 Gene3D G3DSA:1.20.58.1830 230 264 1.8E-23 T 11-10-2018 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 Gene3D G3DSA:1.20.58.1830 9 27 1.2E-39 T 11-10-2018 AVL55_05095 eb1afafe187522f9245f09fd9e6e0d59 265 Pfam PF00700 Bacterial flagellin C-terminal helical region 180 264 6.7E-17 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_07355 749721bae81bad03e5d98f299f4ff3b2 291 Pfam PF01513 ATP-NAD kinase 5 270 1.1E-67 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AVL55_07355 749721bae81bad03e5d98f299f4ff3b2 291 Gene3D G3DSA:2.60.200.30 126 263 4.6E-93 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AVL55_07355 749721bae81bad03e5d98f299f4ff3b2 291 SUPERFAMILY SSF111331 5 288 1.44E-88 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AVL55_07355 749721bae81bad03e5d98f299f4ff3b2 291 Gene3D G3DSA:3.40.50.10330 22 286 4.6E-93 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AVL55_07355 749721bae81bad03e5d98f299f4ff3b2 291 Hamap MF_00361 NAD kinase [nadK]. 4 286 33.032 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AVL55_09320 e21f86b9edaf27fd64e41fa0b468398e 151 Pfam PF01814 Hemerythrin HHE cation binding domain 3 118 1.8E-14 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AVL55_09320 e21f86b9edaf27fd64e41fa0b468398e 151 Gene3D G3DSA:1.20.120.520 1 141 6.6E-9 T 11-10-2018 AVL55_12505 0e3ad09b36e53f9ae7976dd906d9dd0b 152 Pfam PF01638 HxlR-like helix-turn-helix 56 143 1.1E-36 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AVL55_12505 0e3ad09b36e53f9ae7976dd906d9dd0b 152 SUPERFAMILY SSF46785 44 144 2.24E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_12505 0e3ad09b36e53f9ae7976dd906d9dd0b 152 Gene3D G3DSA:1.10.10.10 26 152 2.3E-43 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_15555 9e2b900bae15035b508ca8a7c42999d8 114 Gene3D G3DSA:1.10.10.10 2 101 4.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_15555 9e2b900bae15035b508ca8a7c42999d8 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 4.0E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_15555 9e2b900bae15035b508ca8a7c42999d8 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 4.0E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_15555 9e2b900bae15035b508ca8a7c42999d8 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.0E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_15555 9e2b900bae15035b508ca8a7c42999d8 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.0E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_15555 9e2b900bae15035b508ca8a7c42999d8 114 Pfam PF01022 Bacterial regulatory protein, arsR family 22 66 3.4E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_15555 9e2b900bae15035b508ca8a7c42999d8 114 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 38 56 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AVL55_15555 9e2b900bae15035b508ca8a7c42999d8 114 SUPERFAMILY SSF46785 6 92 2.22E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_15555 9e2b900bae15035b508ca8a7c42999d8 114 SMART SM00418 14 92 3.2E-28 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_12745 0360bf170025745b18b85f835bf87105 113 Gene3D G3DSA:1.20.1290.10 1 113 8.9E-38 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AVL55_12745 0360bf170025745b18b85f835bf87105 113 SUPERFAMILY SSF69118 4 108 1.13E-30 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AVL55_12745 0360bf170025745b18b85f835bf87105 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 1.7E-23 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AVL55_12745 0360bf170025745b18b85f835bf87105 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 85 5.4E-15 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AVL55_06480 938311f7824eba81f270d492ce88d15e 556 PIRSF PIRSF001589 1 367 6.6E-109 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AVL55_06480 938311f7824eba81f270d492ce88d15e 556 PIRSF PIRSF001589 362 514 5.7E-26 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AVL55_06480 938311f7824eba81f270d492ce88d15e 556 Pfam PF13537 Glutamine amidotransferase domain 48 166 1.8E-39 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AVL55_06480 938311f7824eba81f270d492ce88d15e 556 Gene3D G3DSA:3.40.50.620 194 516 2.2E-114 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_06480 938311f7824eba81f270d492ce88d15e 556 SUPERFAMILY SSF56235 1 196 1.03E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_06480 938311f7824eba81f270d492ce88d15e 556 Gene3D G3DSA:3.60.20.10 2 193 1.7E-70 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_06480 938311f7824eba81f270d492ce88d15e 556 Pfam PF00733 Asparagine synthase 211 366 4.0E-56 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AVL55_06480 938311f7824eba81f270d492ce88d15e 556 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 6.6E-118 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AVL55_06480 938311f7824eba81f270d492ce88d15e 556 SUPERFAMILY SSF52402 208 482 8.38E-74 T 11-10-2018 AVL55_05030 6679d6cbcf7cc7b93eded2da6a7a347f 365 SUPERFAMILY SSF53756 1 359 2.04E-102 T 11-10-2018 AVL55_05030 6679d6cbcf7cc7b93eded2da6a7a347f 365 Gene3D G3DSA:3.40.50.2000 187 341 7.0E-115 T 11-10-2018 AVL55_05030 6679d6cbcf7cc7b93eded2da6a7a347f 365 Gene3D G3DSA:3.40.50.2000 7 351 7.0E-115 T 11-10-2018 AVL55_05030 6679d6cbcf7cc7b93eded2da6a7a347f 365 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 355 6.2E-108 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AVL55_05030 6679d6cbcf7cc7b93eded2da6a7a347f 365 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 357 1.7E-91 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 85 97 3.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 11 23 3.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 320 326 3.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 24 34 3.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 52 3.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 354 366 3.7E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 16 33 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 SUPERFAMILY SSF51905 9 380 2.73E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 Gene3D G3DSA:1.10.8.870 398 466 3.7E-22 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 359 369 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 Gene3D G3DSA:3.50.50.60 12 373 5.9E-137 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 Gene3D G3DSA:3.30.9.10 89 327 5.9E-137 T 11-10-2018 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 Pfam PF01266 FAD dependent oxidoreductase 12 333 3.4E-51 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 386 498 8.0E-13 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_16345 5e0b922fa66f4faf7beae59056c2d874 508 SUPERFAMILY SSF54373 233 326 2.16E-6 T 11-10-2018 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 Pfam PF00459 Inositol monophosphatase family 2 251 5.3E-72 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 7.6E-24 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 7.6E-24 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 7.6E-24 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 7.6E-24 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 SUPERFAMILY SSF56655 1 257 8.12E-85 T 11-10-2018 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 Gene3D G3DSA:3.30.540.10 1 140 3.7E-52 T 11-10-2018 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 Gene3D G3DSA:3.40.190.80 141 258 7.7E-36 T 11-10-2018 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 6.0E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.0E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.0E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 6.0E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 6.0E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_13855 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 6.0E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_00520 6f62a1e030f0163a57cde38dd102f663 533 Gene3D G3DSA:3.20.20.70 328 531 2.2E-58 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_00520 6f62a1e030f0163a57cde38dd102f663 533 SUPERFAMILY SSF53613 18 261 2.13E-48 T 11-10-2018 IPR029056 Ribokinase-like AVL55_00520 6f62a1e030f0163a57cde38dd102f663 533 Pfam PF02581 Thiamine monophosphate synthase 344 513 7.2E-55 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AVL55_00520 6f62a1e030f0163a57cde38dd102f663 533 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 326 531 19.574 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AVL55_00520 6f62a1e030f0163a57cde38dd102f663 533 Pfam PF08543 Phosphomethylpyrimidine kinase 28 260 1.5E-48 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AVL55_00520 6f62a1e030f0163a57cde38dd102f663 533 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 344 525 3.4E-51 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AVL55_00520 6f62a1e030f0163a57cde38dd102f663 533 SUPERFAMILY SSF51391 334 528 1.23E-61 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AVL55_00520 6f62a1e030f0163a57cde38dd102f663 533 Gene3D G3DSA:3.40.1190.20 4 281 1.1E-61 T 11-10-2018 IPR029056 Ribokinase-like AVL55_19270 c175eb87a30cad0172162fd2f1e39951 250 SMART SM00047 86 222 0.001 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AVL55_19270 c175eb87a30cad0172162fd2f1e39951 250 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 110 233 5.1E-17 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AVL55_19270 c175eb87a30cad0172162fd2f1e39951 250 Gene3D G3DSA:1.10.530.10 98 238 3.4E-17 T 11-10-2018 AVL55_16370 260541731f50f4cce9788533e2924ae9 500 Pfam PF13005 zinc-finger binding domain of transposase IS66 101 145 8.8E-18 T 11-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AVL55_16370 260541731f50f4cce9788533e2924ae9 500 Pfam PF13817 IS66 C-terminal element 459 495 2.8E-8 T 11-10-2018 IPR039552 Transposase IS66, C-terminal AVL55_16370 260541731f50f4cce9788533e2924ae9 500 Pfam PF03050 Transposase IS66 family 165 452 2.0E-103 T 11-10-2018 IPR004291 Transposase, IS66 AVL55_16370 260541731f50f4cce9788533e2924ae9 500 Pfam PF13007 Transposase C of IS166 homeodomain 29 93 7.3E-14 T 11-10-2018 IPR024463 Transposase TnpC, homeodomain AVL55_14960 3db84846df19c50dc9978135652ec882 1121 SUPERFAMILY SSF47384 656 738 1.65E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 Pfam PF00072 Response regulator receiver domain 920 1029 2.9E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 Pfam PF00512 His Kinase A (phospho-acceptor) domain 671 737 1.9E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 PRINTS PR00344 Bacterial sensor protein C-terminal signature 838 848 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 892 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 PRINTS PR00344 Bacterial sensor protein C-terminal signature 855 873 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 PRINTS PR00344 Bacterial sensor protein C-terminal signature 820 834 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 784 893 3.6E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_14960 3db84846df19c50dc9978135652ec882 1121 SMART SM00388 671 737 1.6E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 SUPERFAMILY SSF55874 727 891 3.41E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_14960 3db84846df19c50dc9978135652ec882 1121 Gene3D G3DSA:1.10.287.130 636 735 5.5E-24 T 11-10-2018 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 Gene3D G3DSA:3.30.565.10 736 897 6.2E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_14960 3db84846df19c50dc9978135652ec882 1121 SMART SM00448 918 1029 2.3E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_14960 3db84846df19c50dc9978135652ec882 1121 Gene3D G3DSA:1.10.4160.10 21 487 2.0E-18 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily AVL55_14960 3db84846df19c50dc9978135652ec882 1121 SUPERFAMILY SSF52172 917 1058 7.4E-25 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_14960 3db84846df19c50dc9978135652ec882 1121 SMART SM00387 784 895 8.2E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_14960 3db84846df19c50dc9978135652ec882 1121 Gene3D G3DSA:3.40.50.2300 910 1050 4.4E-23 T 11-10-2018 AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 SUPERFAMILY SSF55785 174 282 1.48E-10 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 SUPERFAMILY SSF55073 425 578 1.1E-21 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 Pfam PF00563 EAL domain 602 836 1.8E-62 T 11-10-2018 IPR001633 EAL domain AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 SMART SM00052 595 841 1.8E-88 T 11-10-2018 IPR001633 EAL domain AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 SUPERFAMILY SSF141868 601 843 3.79E-78 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 SUPERFAMILY SSF55785 303 414 2.44E-25 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 Gene3D G3DSA:3.30.450.20 287 409 1.9E-32 T 11-10-2018 AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 SMART SM00267 408 584 2.4E-8 T 11-10-2018 IPR000160 GGDEF domain AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 Gene3D G3DSA:3.30.450.20 176 216 1.3E-6 T 11-10-2018 AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 SMART SM00086 368 408 19.0 T 11-10-2018 IPR001610 PAC motif AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 SMART SM00086 238 280 0.17 T 11-10-2018 IPR001610 PAC motif AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 SMART SM00091 292 358 2.2E-9 T 11-10-2018 IPR000014 PAS domain AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 417 577 8.6E-24 T 11-10-2018 IPR000160 GGDEF domain AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 Gene3D G3DSA:2.10.70.100 234 281 2.5E-10 T 11-10-2018 AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 294 413 6.2E-24 T 11-10-2018 IPR000014 PAS domain AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 Gene3D G3DSA:3.30.70.270 413 586 3.5E-26 T 11-10-2018 AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 Pfam PF00990 Diguanylate cyclase, GGDEF domain 419 577 5.2E-22 T 11-10-2018 IPR000160 GGDEF domain AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 Pfam PF00989 PAS fold 294 405 1.7E-14 T 11-10-2018 IPR013767 PAS fold GO:0006355 AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 Gene3D G3DSA:3.20.20.450 597 847 1.3E-82 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_01755 7fc48c9abb1935b4db7a464c4273bee1 852 Pfam PF08447 PAS fold 188 272 4.9E-6 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Gene3D G3DSA:1.10.1740.10 2 86 2.4E-30 T 11-10-2018 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Pfam PF04542 Sigma-70 region 2 17 89 8.0E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 SUPERFAMILY SSF88659 91 155 2.83E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 44 57 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 SUPERFAMILY SSF88659 163 238 1.61E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PIRSF PIRSF000770 3 243 7.2E-33 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 17 236 3.9E-82 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 SUPERFAMILY SSF88946 9 89 2.22E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 6 238 64.313 T 11-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Gene3D G3DSA:1.20.140.160 88 237 2.9E-41 T 11-10-2018 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Pfam PF04545 Sigma-70, region 4 184 232 1.1E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 235 4.1E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Pfam PF04539 Sigma-70 region 3 99 141 3.9E-7 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PRINTS PR00046 Major sigma-70 factor signature 44 57 6.7E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PRINTS PR00046 Major sigma-70 factor signature 188 200 6.7E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PRINTS PR00046 Major sigma-70 factor signature 220 231 6.7E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_05205 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PRINTS PR00046 Major sigma-70 factor signature 205 220 6.7E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_15640 ca06b92162bf8ac2ac4e082e9bbd3249 400 SUPERFAMILY SSF51735 1 189 6.61E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_15640 ca06b92162bf8ac2ac4e082e9bbd3249 400 Gene3D G3DSA:3.40.50.720 5 388 3.1E-147 T 11-10-2018 AVL55_15640 ca06b92162bf8ac2ac4e082e9bbd3249 400 Gene3D G3DSA:3.30.360.10 149 345 3.1E-147 T 11-10-2018 AVL55_15640 ca06b92162bf8ac2ac4e082e9bbd3249 400 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 139 386 2.8E-38 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AVL55_15640 ca06b92162bf8ac2ac4e082e9bbd3249 400 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 135 1.7E-31 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AVL55_10960 e44d45b59a4ab45a0dc9e246eee124ce 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 10 120 1.1E-23 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AVL55_10960 e44d45b59a4ab45a0dc9e246eee124ce 127 TIGRFAM TIGR00494 crcB: protein CrcB 11 124 3.5E-30 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AVL55_10960 e44d45b59a4ab45a0dc9e246eee124ce 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 8 126 18.724 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.889 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 5.9E-58 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.5E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.5E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.5E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.5E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.5E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 SUPERFAMILY SSF54919 1 140 1.96E-60 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 Gene3D G3DSA:3.30.70.141 1 143 2.5E-59 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_13790 fc4729d4247d830ebd2baf87ed4d8a98 143 SMART SM00562 3 140 1.3E-88 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 SUPERFAMILY SSF82714 724 806 1.96E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 3.5E-85 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.5E-85 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 3.5E-85 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 3.5E-85 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 3.5E-85 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.5E-85 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.5E-85 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 3.5E-85 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.5E-85 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 SUPERFAMILY SSF82693 38 124 2.88E-18 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 Gene3D G3DSA:1.20.1640.10 518 1025 1.4E-281 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 Gene3D G3DSA:3.30.70.1430 572 669 1.4E-281 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 SUPERFAMILY SSF82693 135 331 9.24E-21 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 Gene3D G3DSA:1.20.1640.10 8 517 1.4E-281 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 Gene3D G3DSA:3.30.70.1320 133 333 1.4E-281 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 SUPERFAMILY SSF82866 809 1031 1.28E-40 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 Gene3D G3DSA:3.30.2090.10 723 811 1.4E-281 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1036 1.0E-294 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 Gene3D G3DSA:3.30.70.1430 38 819 1.4E-281 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 SUPERFAMILY SSF82714 183 273 1.2E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 Gene3D G3DSA:3.30.70.1440 670 868 1.4E-281 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 1.4E-280 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 SUPERFAMILY SSF82693 570 672 9.94E-20 T 11-10-2018 AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 Gene3D G3DSA:3.30.2090.10 179 276 1.4E-281 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_03970 ab57cd049b155e55062c6ad60a65512e 1061 SUPERFAMILY SSF82866 298 499 2.88E-47 T 11-10-2018 AVL55_14490 dc8cdfb27a1c94ddf38a9309ebe95655 677 Gene3D G3DSA:3.40.640.10 185 464 4.6E-86 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_14490 dc8cdfb27a1c94ddf38a9309ebe95655 677 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 407 421 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AVL55_14490 dc8cdfb27a1c94ddf38a9309ebe95655 677 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 612 661 6.7E-10 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AVL55_14490 dc8cdfb27a1c94ddf38a9309ebe95655 677 SUPERFAMILY SSF53383 185 574 1.9E-81 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_14490 dc8cdfb27a1c94ddf38a9309ebe95655 677 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 37 149 2.8E-7 T 11-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AVL55_14490 dc8cdfb27a1c94ddf38a9309ebe95655 677 Gene3D G3DSA:3.90.105.10 614 670 6.0E-17 T 11-10-2018 AVL55_14490 dc8cdfb27a1c94ddf38a9309ebe95655 677 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 185 562 1.3E-85 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AVL55_14490 dc8cdfb27a1c94ddf38a9309ebe95655 677 SUPERFAMILY SSF55904 534 674 1.7E-26 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AVL55_12805 4623836f16175a467a70e09329da8a09 550 Pfam PF00732 GMC oxidoreductase 8 299 9.0E-92 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AVL55_12805 4623836f16175a467a70e09329da8a09 550 Gene3D G3DSA:1.10.1220.110 100 154 5.9E-184 T 11-10-2018 AVL55_12805 4623836f16175a467a70e09329da8a09 550 Pfam PF05199 GMC oxidoreductase 391 529 3.0E-44 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AVL55_12805 4623836f16175a467a70e09329da8a09 550 Gene3D G3DSA:4.10.450.10 41 200 5.9E-184 T 11-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AVL55_12805 4623836f16175a467a70e09329da8a09 550 PIRSF PIRSF000137 2 544 1.5E-154 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AVL55_12805 4623836f16175a467a70e09329da8a09 550 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AVL55_12805 4623836f16175a467a70e09329da8a09 550 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 258 272 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AVL55_12805 4623836f16175a467a70e09329da8a09 550 SUPERFAMILY SSF54373 294 477 1.96E-54 T 11-10-2018 AVL55_12805 4623836f16175a467a70e09329da8a09 550 Gene3D G3DSA:3.50.50.60 8 533 5.9E-184 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12805 4623836f16175a467a70e09329da8a09 550 Gene3D G3DSA:3.30.410.40 155 474 5.9E-184 T 11-10-2018 AVL55_12805 4623836f16175a467a70e09329da8a09 550 SUPERFAMILY SSF51905 7 534 1.62E-86 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 559 621 4.7E-25 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 Gene3D G3DSA:3.30.230.10 216 390 1.3E-53 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 SMART SM00387 27 173 1.4E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR00418 DNA topoisomerase II family signature 31 46 4.5E-58 T 11-10-2018 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR00418 DNA topoisomerase II family signature 66 79 4.5E-58 T 11-10-2018 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 4.5E-58 T 11-10-2018 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 4.5E-58 T 11-10-2018 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 4.5E-58 T 11-10-2018 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR00418 DNA topoisomerase II family signature 109 123 4.5E-58 T 11-10-2018 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 4.5E-58 T 11-10-2018 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR00418 DNA topoisomerase II family signature 563 579 4.5E-58 T 11-10-2018 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 4.5E-58 T 11-10-2018 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 Gene3D G3DSA:3.40.50.670 391 624 9.8E-91 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 SUPERFAMILY SSF55874 4 215 9.32E-67 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 SUPERFAMILY SSF56719 389 622 1.8E-78 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 Pfam PF00204 DNA gyrase B 218 385 6.9E-40 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 629 46.91 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 SMART SM00433 34 625 4.9E-209 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 Pfam PF01751 Toprim domain 414 523 1.2E-12 T 11-10-2018 IPR006171 TOPRIM domain AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 8.4E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 626 0.0 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 Gene3D G3DSA:3.30.565.10 2 215 8.8E-76 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 SUPERFAMILY SSF54211 217 382 3.22E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_02850 0e74bf74dfabab9993ceb8591fddaf7a 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.7E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03895 269f17da315767b25484d65656b9ab46 958 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 687 802 4.8E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03895 269f17da315767b25484d65656b9ab46 958 Gene3D G3DSA:3.40.50.12740 825 958 1.5E-41 T 11-10-2018 AVL55_03895 269f17da315767b25484d65656b9ab46 958 SUPERFAMILY SSF55785 330 421 4.54E-5 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_03895 269f17da315767b25484d65656b9ab46 958 Gene3D G3DSA:1.10.287.130 551 638 5.0E-27 T 11-10-2018 AVL55_03895 269f17da315767b25484d65656b9ab46 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 728 742 4.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03895 269f17da315767b25484d65656b9ab46 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 787 800 4.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03895 269f17da315767b25484d65656b9ab46 958 PRINTS PR00344 Bacterial sensor protein C-terminal signature 763 781 4.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03895 269f17da315767b25484d65656b9ab46 958 SMART SM00388 575 640 1.1E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_03895 269f17da315767b25484d65656b9ab46 958 SMART SM00448 826 942 4.7E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_03895 269f17da315767b25484d65656b9ab46 958 SMART SM00091 439 508 0.0016 T 11-10-2018 IPR000014 PAS domain AVL55_03895 269f17da315767b25484d65656b9ab46 958 SMART SM00091 332 400 4.0 T 11-10-2018 IPR000014 PAS domain AVL55_03895 269f17da315767b25484d65656b9ab46 958 Pfam PF00512 His Kinase A (phospho-acceptor) domain 576 640 1.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_03895 269f17da315767b25484d65656b9ab46 958 SUPERFAMILY SSF55874 629 799 2.62E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03895 269f17da315767b25484d65656b9ab46 958 SUPERFAMILY SSF55785 449 555 1.1E-23 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_03895 269f17da315767b25484d65656b9ab46 958 Pfam PF13426 PAS domain 462 554 1.9E-18 T 11-10-2018 IPR000014 PAS domain AVL55_03895 269f17da315767b25484d65656b9ab46 958 Pfam PF00072 Response regulator receiver domain 828 942 1.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_03895 269f17da315767b25484d65656b9ab46 958 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 444 561 4.0E-18 T 11-10-2018 IPR000014 PAS domain AVL55_03895 269f17da315767b25484d65656b9ab46 958 SUPERFAMILY SSF47384 560 641 2.16E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_03895 269f17da315767b25484d65656b9ab46 958 Gene3D G3DSA:3.30.450.20 438 550 1.4E-37 T 11-10-2018 AVL55_03895 269f17da315767b25484d65656b9ab46 958 Gene3D G3DSA:3.30.450.20 324 437 1.8E-6 T 11-10-2018 AVL55_03895 269f17da315767b25484d65656b9ab46 958 SUPERFAMILY SSF52172 825 947 4.27E-36 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_03895 269f17da315767b25484d65656b9ab46 958 Gene3D G3DSA:3.30.565.10 639 807 1.0E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03895 269f17da315767b25484d65656b9ab46 958 SMART SM00387 687 803 5.4E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03895 269f17da315767b25484d65656b9ab46 958 SMART SM00086 514 555 2.0E-5 T 11-10-2018 IPR001610 PAC motif AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 Pfam PF00158 Sigma-54 interaction domain 207 371 1.8E-59 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 SMART SM00091 80 146 1.1E-5 T 11-10-2018 IPR000014 PAS domain AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 SUPERFAMILY SSF55785 79 133 4.36E-7 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 Gene3D G3DSA:3.30.450.20 82 190 1.6E-23 T 11-10-2018 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 418 427 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 SMART SM00382 226 369 5.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 Gene3D G3DSA:3.40.50.300 193 376 4.4E-60 T 11-10-2018 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 Gene3D G3DSA:3.30.70.260 1 80 2.1E-26 T 11-10-2018 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 2.7E-28 T 11-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 Gene3D G3DSA:1.10.10.60 454 513 2.1E-27 T 11-10-2018 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 SUPERFAMILY SSF52540 206 447 4.06E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 SUPERFAMILY SSF55021 2 68 8.39E-6 T 11-10-2018 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 SUPERFAMILY SSF46689 456 512 6.57E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 Gene3D G3DSA:1.10.8.60 378 452 5.0E-22 T 11-10-2018 AVL55_05420 0827aa97d32adb5d1eb01915b9db2d7c 518 Pfam PF00989 PAS fold 81 128 1.2E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 AVL55_00525 49dc0569733da033c3469f1fc39e16ae 636 Pfam PF13667 ThiC-associated domain 23 103 1.1E-29 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AVL55_00525 49dc0569733da033c3469f1fc39e16ae 636 Pfam PF01964 Radical SAM ThiC family 144 592 1.5E-200 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AVL55_00525 49dc0569733da033c3469f1fc39e16ae 636 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.862 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AVL55_00525 49dc0569733da033c3469f1fc39e16ae 636 Gene3D G3DSA:3.20.20.540 216 527 4.4E-154 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AVL55_00525 49dc0569733da033c3469f1fc39e16ae 636 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 595 4.0E-220 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AVL55_16260 016cc37446f8f337e19d25c049e79a08 356 Pfam PF06114 IrrE N-terminal-like domain 157 272 2.0E-14 T 11-10-2018 IPR010359 IrrE N-terminal-like domain AVL55_16260 016cc37446f8f337e19d25c049e79a08 356 SUPERFAMILY SSF47413 2 65 2.82E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_16260 016cc37446f8f337e19d25c049e79a08 356 Gene3D G3DSA:3.40.390.50 159 233 9.7E-7 T 11-10-2018 AVL55_16260 016cc37446f8f337e19d25c049e79a08 356 Gene3D G3DSA:1.10.260.40 1 64 1.6E-14 T 11-10-2018 AVL55_16260 016cc37446f8f337e19d25c049e79a08 356 SMART SM00530 5 60 1.1E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_16260 016cc37446f8f337e19d25c049e79a08 356 Pfam PF01381 Helix-turn-helix 6 60 2.6E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_04620 c4f65393c62ebca029561f54d4adcb9b 518 Pfam PF00990 Diguanylate cyclase, GGDEF domain 354 508 1.1E-44 T 11-10-2018 IPR000160 GGDEF domain AVL55_04620 c4f65393c62ebca029561f54d4adcb9b 518 SUPERFAMILY SSF55073 358 511 1.8E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_04620 c4f65393c62ebca029561f54d4adcb9b 518 Gene3D G3DSA:3.30.70.270 348 515 1.4E-52 T 11-10-2018 AVL55_04620 c4f65393c62ebca029561f54d4adcb9b 518 SMART SM00267 342 513 3.0E-48 T 11-10-2018 IPR000160 GGDEF domain AVL55_04620 c4f65393c62ebca029561f54d4adcb9b 518 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 352 511 3.4E-46 T 11-10-2018 IPR000160 GGDEF domain AVL55_04925 0d3201adf7c8e20c5e44fed99d845f42 161 Pfam PF03646 FlaG protein 53 158 1.6E-22 T 11-10-2018 IPR005186 FlaG protein AVL55_04925 0d3201adf7c8e20c5e44fed99d845f42 161 Gene3D G3DSA:3.30.160.170 22 147 9.2E-14 T 11-10-2018 IPR035924 FlaG-like superfamily AVL55_04925 0d3201adf7c8e20c5e44fed99d845f42 161 SUPERFAMILY SSF160214 62 160 2.22E-21 T 11-10-2018 IPR035924 FlaG-like superfamily AVL55_13410 77be5154bc2c54fbce2a80610e42b59d 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 212 1.1E-83 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AVL55_13410 77be5154bc2c54fbce2a80610e42b59d 212 PIRSF PIRSF000190 1 212 1.6E-80 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AVL55_13410 77be5154bc2c54fbce2a80610e42b59d 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 4.7E-20 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AVL55_13410 77be5154bc2c54fbce2a80610e42b59d 212 Gene3D G3DSA:2.30.110.10 1 212 4.6E-76 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AVL55_13410 77be5154bc2c54fbce2a80610e42b59d 212 SUPERFAMILY SSF50475 15 212 1.36E-62 T 11-10-2018 AVL55_13410 77be5154bc2c54fbce2a80610e42b59d 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 115 6.9E-21 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AVL55_13410 77be5154bc2c54fbce2a80610e42b59d 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 212 38.138 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AVL55_13410 77be5154bc2c54fbce2a80610e42b59d 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AVL55_07335 4f44d83e85287c12cdba3a47f1da1924 217 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 194 1.3E-55 T 11-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AVL55_07335 4f44d83e85287c12cdba3a47f1da1924 217 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 207 3.1E-72 T 11-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AVL55_07335 4f44d83e85287c12cdba3a47f1da1924 217 Gene3D G3DSA:3.40.50.150 1 213 3.4E-53 T 11-10-2018 AVL55_07335 4f44d83e85287c12cdba3a47f1da1924 217 SUPERFAMILY SSF53335 1 194 5.16E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_07335 4f44d83e85287c12cdba3a47f1da1924 217 PIRSF PIRSF023956 1 217 3.2E-70 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AVL55_07335 4f44d83e85287c12cdba3a47f1da1924 217 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 216 35.658 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AVL55_04335 85e6b72c371e2f5c745941da9322eaa7 331 Pfam PF00072 Response regulator receiver domain 4 114 6.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_04335 85e6b72c371e2f5c745941da9322eaa7 331 SUPERFAMILY SSF103039 133 325 1.22E-42 T 11-10-2018 IPR028976 CheC-like superfamily AVL55_04335 85e6b72c371e2f5c745941da9322eaa7 331 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-28 T 11-10-2018 AVL55_04335 85e6b72c371e2f5c745941da9322eaa7 331 Gene3D G3DSA:3.40.1550.10 132 325 7.1E-35 T 11-10-2018 IPR028976 CheC-like superfamily AVL55_04335 85e6b72c371e2f5c745941da9322eaa7 331 SUPERFAMILY SSF52172 1 151 1.31E-29 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_04335 85e6b72c371e2f5c745941da9322eaa7 331 SMART SM00448 2 114 1.2E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_11745 e5a574152ce1a37f0026b3db081ad090 815 Pfam PF16313 Met-zincin 416 730 6.7E-62 T 11-10-2018 IPR032534 Domain of unknown function DUF4953 AVL55_11745 e5a574152ce1a37f0026b3db081ad090 815 Pfam PF17148 Domain of unknown function (DUF5117) 98 290 5.9E-37 T 11-10-2018 IPR033413 Domain of unknown function DUF5117 AVL55_11745 e5a574152ce1a37f0026b3db081ad090 815 SUPERFAMILY SSF55486 290 493 1.42E-24 T 11-10-2018 AVL55_11745 e5a574152ce1a37f0026b3db081ad090 815 Gene3D G3DSA:3.40.390.10 358 492 1.9E-7 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AVL55_15875 40f931795cb50401a5c07e8ca852b8df 445 SUPERFAMILY SSF103473 15 423 5.36E-34 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_15875 40f931795cb50401a5c07e8ca852b8df 445 Gene3D G3DSA:1.20.1250.20 232 422 8.5E-46 T 11-10-2018 AVL55_15875 40f931795cb50401a5c07e8ca852b8df 445 Gene3D G3DSA:1.20.1250.20 11 227 3.7E-50 T 11-10-2018 AVL55_15875 40f931795cb50401a5c07e8ca852b8df 445 Pfam PF07690 Major Facilitator Superfamily 20 373 8.3E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_15875 40f931795cb50401a5c07e8ca852b8df 445 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 13 415 4.4E-133 T 11-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Pfam PF01627 Hpt domain 951 1029 1.2E-12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 SMART SM00388 430 495 5.0E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 SMART SM00448 803 916 1.8E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Pfam PF00072 Response regulator receiver domain 805 916 2.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 SUPERFAMILY SSF52172 801 922 2.99E-35 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 SUPERFAMILY SSF47384 417 496 9.61E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Pfam PF07696 7TMR-DISM extracellular 2 42 169 3.8E-24 T 11-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Gene3D G3DSA:3.30.565.10 494 660 1.1E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Pfam PF00512 His Kinase A (phospho-acceptor) domain 431 495 6.4E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Gene3D G3DSA:1.10.287.130 393 493 2.9E-26 T 11-10-2018 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Gene3D G3DSA:3.40.50.2300 800 926 2.2E-37 T 11-10-2018 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 541 655 2.1E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 SMART SM00073 942 1036 6.4E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 SUPERFAMILY SSF55874 484 654 6.68E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 635 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 596 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 654 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 610 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Pfam PF07695 7TM diverse intracellular signalling 182 386 2.2E-43 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 SUPERFAMILY SSF47226 899 1031 2.88E-21 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Gene3D G3DSA:1.20.120.160 931 1037 7.4E-27 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 Gene3D G3DSA:2.60.40.2380 36 171 2.7E-16 T 11-10-2018 AVL55_01825 faec48ba2f7e148c703b663aa2becae0 1042 SMART SM00387 541 657 7.9E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_07050 b5333b32d5ae4857bfdc6eb338b79890 372 SUPERFAMILY SSF53335 128 311 5.17E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_07050 b5333b32d5ae4857bfdc6eb338b79890 372 Pfam PF08241 Methyltransferase domain 164 253 4.0E-23 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AVL55_07050 b5333b32d5ae4857bfdc6eb338b79890 372 Gene3D G3DSA:3.40.50.150 128 323 6.2E-33 T 11-10-2018 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 SMART SM01210 330 423 1.2E-55 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 Gene3D G3DSA:3.40.50.20 2 95 1.0E-35 T 11-10-2018 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 SUPERFAMILY SSF52440 1 103 4.17E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 8.3E-31 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 9.0E-34 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 Gene3D G3DSA:3.30.470.20 191 329 1.6E-59 T 11-10-2018 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 SUPERFAMILY SSF56059 104 324 1.06E-67 T 11-10-2018 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.7E-84 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 SMART SM01209 103 296 5.0E-140 T 11-10-2018 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 Gene3D G3DSA:3.30.1490.20 121 190 3.1E-29 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.726 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 5.3E-182 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 Gene3D G3DSA:3.90.600.10 330 430 7.1E-35 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_19265 33b9f45a48b13fe77fee336b74378526 430 SUPERFAMILY SSF51246 329 424 1.88E-33 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AVL55_11275 f840f2b3ffd0657ee37407ad31a9383f 196 Gene3D G3DSA:3.40.50.360 2 196 1.4E-57 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_11275 f840f2b3ffd0657ee37407ad31a9383f 196 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AVL55_11275 f840f2b3ffd0657ee37407ad31a9383f 196 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 192 5.6E-43 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AVL55_11275 f840f2b3ffd0657ee37407ad31a9383f 196 SUPERFAMILY SSF52218 4 192 1.19E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_11275 f840f2b3ffd0657ee37407ad31a9383f 196 Pfam PF03358 NADPH-dependent FMN reductase 11 132 4.4E-9 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AVL55_18510 e23e81335f255eb914402f5a1f2288c2 82 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 3.5E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AVL55_18510 e23e81335f255eb914402f5a1f2288c2 82 Gene3D G3DSA:2.30.30.100 1 81 8.6E-34 T 11-10-2018 AVL55_18510 e23e81335f255eb914402f5a1f2288c2 82 Pfam PF17209 Hfq protein 7 68 2.3E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AVL55_18510 e23e81335f255eb914402f5a1f2288c2 82 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.752 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AVL55_18510 e23e81335f255eb914402f5a1f2288c2 82 SUPERFAMILY SSF50182 7 69 1.85E-24 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_14570 2bf616dde7dcb9409a0bfb038ee51b2f 183 Pfam PF02635 DsrE/DsrF-like family 69 180 1.2E-15 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AVL55_14570 2bf616dde7dcb9409a0bfb038ee51b2f 183 Gene3D G3DSA:3.40.1260.10 54 181 5.1E-8 T 11-10-2018 IPR027396 DsrEFH-like AVL55_14570 2bf616dde7dcb9409a0bfb038ee51b2f 183 SUPERFAMILY SSF75169 56 183 2.02E-19 T 11-10-2018 IPR027396 DsrEFH-like AVL55_12795 12df79fb1c64fce4f0bd8002178c6d39 279 Gene3D G3DSA:3.90.226.10 1 212 5.9E-64 T 11-10-2018 AVL55_12795 12df79fb1c64fce4f0bd8002178c6d39 279 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 262 6.3E-45 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AVL55_12795 12df79fb1c64fce4f0bd8002178c6d39 279 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AVL55_12795 12df79fb1c64fce4f0bd8002178c6d39 279 Gene3D G3DSA:1.10.12.10 213 270 3.1E-20 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AVL55_12795 12df79fb1c64fce4f0bd8002178c6d39 279 SUPERFAMILY SSF52096 1 268 2.57E-74 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 Pfam PF01872 RibD C-terminal domain 146 356 7.0E-47 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 145 359 2.2E-55 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 1 356 5.0E-114 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 Gene3D G3DSA:3.40.140.10 1 139 4.1E-44 T 11-10-2018 AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 99 1.2E-20 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 SUPERFAMILY SSF53927 1 141 1.51E-43 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 PIRSF PIRSF006769 1 361 1.4E-119 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 Gene3D G3DSA:3.40.430.10 140 365 7.4E-65 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 45 87 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AVL55_13355 4d8899a26ae1b33c8273266b6adc3f7d 367 SUPERFAMILY SSF53597 143 357 2.62E-53 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AVL55_15985 daeec4c75d0730147ac6cc30ced693ca 391 Gene3D G3DSA:3.90.1150.10 13 389 4.8E-119 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_15985 daeec4c75d0730147ac6cc30ced693ca 391 SUPERFAMILY SSF53383 7 390 3.86E-83 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_15985 daeec4c75d0730147ac6cc30ced693ca 391 Gene3D G3DSA:3.40.640.10 66 303 4.8E-119 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_15985 daeec4c75d0730147ac6cc30ced693ca 391 Pfam PF00155 Aminotransferase class I and II 52 389 6.7E-35 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_15985 daeec4c75d0730147ac6cc30ced693ca 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 390 3.6E-103 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AVL55_16285 121354b4136112b130499e4815289f45 300 SUPERFAMILY SSF51569 9 299 1.57E-80 T 11-10-2018 AVL55_16285 121354b4136112b130499e4815289f45 300 Pfam PF00274 Fructose-bisphosphate aldolase class-I 58 190 4.5E-7 T 11-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_16285 121354b4136112b130499e4815289f45 300 Gene3D G3DSA:3.20.20.70 5 300 4.5E-114 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_04000 2b2997aa283c76b845ecc989d7a1e6cb 168 Gene3D G3DSA:3.30.70.260 1 76 6.0E-15 T 11-10-2018 AVL55_04000 2b2997aa283c76b845ecc989d7a1e6cb 168 Pfam PF13740 ACT domain 3 68 5.0E-8 T 11-10-2018 AVL55_04000 2b2997aa283c76b845ecc989d7a1e6cb 168 SUPERFAMILY SSF55021 82 166 2.98E-11 T 11-10-2018 AVL55_04000 2b2997aa283c76b845ecc989d7a1e6cb 168 Gene3D G3DSA:3.30.70.260 81 167 7.3E-19 T 11-10-2018 AVL55_04000 2b2997aa283c76b845ecc989d7a1e6cb 168 PIRSF PIRSF028103 1 168 2.8E-34 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AVL55_04000 2b2997aa283c76b845ecc989d7a1e6cb 168 SUPERFAMILY SSF55021 3 68 1.92E-9 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 Gene3D G3DSA:3.40.50.1000 489 756 5.1E-61 T 11-10-2018 IPR023214 HAD superfamily AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 633 796 1.3E-29 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 283 547 1.4E-39 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 Gene3D G3DSA:3.30.70.100 89 160 3.1E-13 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 SUPERFAMILY SSF56784 507 816 2.32E-46 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 SUPERFAMILY SSF55008 91 166 9.29E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 689 705 1.5E-7 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 717 733 1.5E-7 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 748 773 1.5E-7 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 Pfam PF00403 Heavy-metal-associated domain 99 157 1.6E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 89 1.8E-24 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 740 752 1.4E-23 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 1.4E-23 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 674 1.4E-23 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 736 1.4E-23 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 523 1.4E-23 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 Pfam PF00122 E1-E2 ATPase 315 489 2.8E-47 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 511 517 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 Gene3D G3DSA:3.40.1110.10 519 650 5.1E-61 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 731 2.0E-25 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 SUPERFAMILY SSF81665 264 501 1.7E-10 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 SUPERFAMILY SSF81653 318 410 1.44E-22 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 Gene3D G3DSA:2.70.150.20 305 415 2.0E-30 T 11-10-2018 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 249 819 3.0E-153 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_10760 30ec7bb638149d675cb84040868ead1a 822 ProSitePatterns PS01047 Heavy-metal-associated domain. 100 129 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AVL55_00995 4eb049848d187d5b9ed32b6d6ce95caf 121 TIGRFAM TIGR03982 TIGR03982: His-Xaa-Ser system protein, TIGR03982 family 7 121 2.4E-37 T 11-10-2018 IPR023814 Conserved hypothetical protein CHP03982 AVL55_05575 2b5d27a9823137e76a3f5a9a94174a6a 357 Gene3D G3DSA:2.40.30.170 216 336 1.2E-20 T 11-10-2018 AVL55_05575 2b5d27a9823137e76a3f5a9a94174a6a 357 Gene3D G3DSA:1.10.287.470 101 202 6.1E-9 T 11-10-2018 AVL55_05575 2b5d27a9823137e76a3f5a9a94174a6a 357 Gene3D G3DSA:2.40.50.100 46 100 4.4E-11 T 11-10-2018 AVL55_05575 2b5d27a9823137e76a3f5a9a94174a6a 357 SUPERFAMILY SSF111369 45 172 1.31E-14 T 11-10-2018 AVL55_05575 2b5d27a9823137e76a3f5a9a94174a6a 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 273 5.6E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_05575 2b5d27a9823137e76a3f5a9a94174a6a 357 SUPERFAMILY SSF111369 183 256 2.35E-7 T 11-10-2018 AVL55_02310 276972ebee1c0715ae105819a2e4a186 156 Pfam PF01936 NYN domain 4 150 1.8E-38 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type AVL55_02310 276972ebee1c0715ae105819a2e4a186 156 Gene3D G3DSA:3.40.50.1010 2 156 3.2E-50 T 11-10-2018 AVL55_02545 d6f0cb91d5893fce065a14145b47c7c2 324 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AVL55_02545 d6f0cb91d5893fce065a14145b47c7c2 324 SUPERFAMILY SSF48576 5 323 2.88E-99 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AVL55_02545 d6f0cb91d5893fce065a14145b47c7c2 324 Gene3D G3DSA:1.10.600.10 1 324 2.5E-113 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AVL55_02545 d6f0cb91d5893fce065a14145b47c7c2 324 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AVL55_02545 d6f0cb91d5893fce065a14145b47c7c2 324 Pfam PF00348 Polyprenyl synthetase 32 263 4.9E-75 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AVL55_08100 326109db8848c4119461accc86f88d31 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.7E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AVL55_08100 326109db8848c4119461accc86f88d31 65 Pfam PF01632 Ribosomal protein L35 2 62 2.3E-24 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08100 326109db8848c4119461accc86f88d31 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.5E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AVL55_08100 326109db8848c4119461accc86f88d31 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.5E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AVL55_08100 326109db8848c4119461accc86f88d31 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.5E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AVL55_08100 326109db8848c4119461accc86f88d31 65 SUPERFAMILY SSF143034 2 64 3.27E-24 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08100 326109db8848c4119461accc86f88d31 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_08100 326109db8848c4119461accc86f88d31 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.675 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AVL55_08100 326109db8848c4119461accc86f88d31 65 Gene3D G3DSA:2.40.50.530 1 64 2.0E-22 T 11-10-2018 AVL55_00060 3e34105c71a95d9b5e1bdd07c2ede4dd 207 Gene3D G3DSA:1.10.760.10 111 207 3.4E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_00060 3e34105c71a95d9b5e1bdd07c2ede4dd 207 PRINTS PR00605 Class IC cytochrome C signature 81 103 3.5E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AVL55_00060 3e34105c71a95d9b5e1bdd07c2ede4dd 207 PRINTS PR00605 Class IC cytochrome C signature 32 43 3.5E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AVL55_00060 3e34105c71a95d9b5e1bdd07c2ede4dd 207 SUPERFAMILY SSF46626 117 205 1.18E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_00060 3e34105c71a95d9b5e1bdd07c2ede4dd 207 PIRSF PIRSF000005 1 207 8.0E-64 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AVL55_00060 3e34105c71a95d9b5e1bdd07c2ede4dd 207 SUPERFAMILY SSF46626 5 109 4.95E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_00060 3e34105c71a95d9b5e1bdd07c2ede4dd 207 Pfam PF00034 Cytochrome c 29 106 2.5E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_00060 3e34105c71a95d9b5e1bdd07c2ede4dd 207 Pfam PF00034 Cytochrome c 120 205 3.4E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_00060 3e34105c71a95d9b5e1bdd07c2ede4dd 207 Gene3D G3DSA:1.10.760.10 21 108 3.2E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_17525 966803805693c8b94dda8f8341799c0d 59 SUPERFAMILY SSF55129 1 58 4.97E-21 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AVL55_17525 966803805693c8b94dda8f8341799c0d 59 PIRSF PIRSF002211 1 59 2.9E-26 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17525 966803805693c8b94dda8f8341799c0d 59 Gene3D G3DSA:3.30.1390.20 1 58 1.7E-25 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AVL55_17525 966803805693c8b94dda8f8341799c0d 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 11-10-2018 IPR018038 Ribosomal protein L30, conserved site AVL55_17525 966803805693c8b94dda8f8341799c0d 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 20.502 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17525 966803805693c8b94dda8f8341799c0d 59 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 8.2E-20 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AVL55_17525 966803805693c8b94dda8f8341799c0d 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.0E-25 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_14630 70e8f66fa27d2ac41a91c57e65da1c44 341 SUPERFAMILY SSF56176 3 218 7.01E-52 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AVL55_14630 70e8f66fa27d2ac41a91c57e65da1c44 341 SMART SM01092 225 323 3.9E-22 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AVL55_14630 70e8f66fa27d2ac41a91c57e65da1c44 341 Gene3D G3DSA:3.30.390.50 222 326 8.4E-20 T 11-10-2018 AVL55_14630 70e8f66fa27d2ac41a91c57e65da1c44 341 Gene3D G3DSA:3.30.465.10 1 220 1.4E-70 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AVL55_14630 70e8f66fa27d2ac41a91c57e65da1c44 341 SUPERFAMILY SSF55447 223 324 2.49E-22 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AVL55_14630 70e8f66fa27d2ac41a91c57e65da1c44 341 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 226 321 2.7E-14 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AVL55_14630 70e8f66fa27d2ac41a91c57e65da1c44 341 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 21 217 2.6E-41 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AVL55_04780 1f8538dc93d5bb5c1d0798688f9d1408 665 Pfam PF00999 Sodium/hydrogen exchanger family 18 383 7.5E-64 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AVL55_04780 1f8538dc93d5bb5c1d0798688f9d1408 665 Gene3D G3DSA:3.30.70.1450 590 663 2.3E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_04780 1f8538dc93d5bb5c1d0798688f9d1408 665 Pfam PF02080 TrkA-C domain 594 661 1.8E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AVL55_04780 1f8538dc93d5bb5c1d0798688f9d1408 665 Pfam PF02254 TrkA-N domain 417 530 9.7E-22 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AVL55_04780 1f8538dc93d5bb5c1d0798688f9d1408 665 Gene3D G3DSA:1.20.1530.20 12 396 1.1E-82 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AVL55_04780 1f8538dc93d5bb5c1d0798688f9d1408 665 Gene3D G3DSA:3.40.50.720 413 572 4.1E-33 T 11-10-2018 AVL55_04780 1f8538dc93d5bb5c1d0798688f9d1408 665 SUPERFAMILY SSF51735 413 556 1.71E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_04780 1f8538dc93d5bb5c1d0798688f9d1408 665 SUPERFAMILY SSF116726 587 659 1.7E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_02455 1332d4976bbee8e03ee42577fd085378 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 3.4E-22 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AVL55_02455 1332d4976bbee8e03ee42577fd085378 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 6.0E-6 T 11-10-2018 AVL55_02455 1332d4976bbee8e03ee42577fd085378 84 Gene3D G3DSA:3.40.1620.10 1 40 7.5E-8 T 11-10-2018 AVL55_02455 1332d4976bbee8e03ee42577fd085378 84 Gene3D G3DSA:1.10.1220.170 41 84 3.9E-14 T 11-10-2018 AVL55_02455 1332d4976bbee8e03ee42577fd085378 84 SUPERFAMILY SSF143120 1 81 6.8E-24 T 11-10-2018 IPR036165 YefM-like superfamily AVL55_01620 3666235ce891f3d90e755209331803ad 234 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.08 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AVL55_01620 3666235ce891f3d90e755209331803ad 234 SUPERFAMILY SSF54821 108 206 6.15E-40 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01620 3666235ce891f3d90e755209331803ad 234 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01620 3666235ce891f3d90e755209331803ad 234 SMART SM00322 60 125 4.6E-7 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AVL55_01620 3666235ce891f3d90e755209331803ad 234 SUPERFAMILY SSF54814 2 106 1.36E-37 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AVL55_01620 3666235ce891f3d90e755209331803ad 234 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.5E-41 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01620 3666235ce891f3d90e755209331803ad 234 Pfam PF07650 KH domain 39 111 3.0E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01620 3666235ce891f3d90e755209331803ad 234 Gene3D G3DSA:3.30.300.20 17 107 2.1E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AVL55_01620 3666235ce891f3d90e755209331803ad 234 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 6.5E-98 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AVL55_01620 3666235ce891f3d90e755209331803ad 234 Gene3D G3DSA:3.30.1140.32 108 208 5.8E-45 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_07240 f1803c39f9389e54c03e915a4335e88d 224 Pfam PF00072 Response regulator receiver domain 3 111 2.4E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07240 f1803c39f9389e54c03e915a4335e88d 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 1.9E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_07240 f1803c39f9389e54c03e915a4335e88d 224 Gene3D G3DSA:1.10.10.10 123 223 2.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_07240 f1803c39f9389e54c03e915a4335e88d 224 SMART SM00862 145 220 1.1E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_07240 f1803c39f9389e54c03e915a4335e88d 224 Gene3D G3DSA:3.40.50.2300 1 122 6.8E-40 T 11-10-2018 AVL55_07240 f1803c39f9389e54c03e915a4335e88d 224 SMART SM00448 1 112 7.3E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07240 f1803c39f9389e54c03e915a4335e88d 224 SUPERFAMILY SSF52172 1 175 3.95E-39 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_05230 012555edebb7e7498bdedc2ad6a112e6 254 SUPERFAMILY SSF52540 1 253 2.72E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05230 012555edebb7e7498bdedc2ad6a112e6 254 Pfam PF13614 AAA domain 1 180 2.9E-48 T 11-10-2018 IPR025669 AAA domain AVL55_05230 012555edebb7e7498bdedc2ad6a112e6 254 Gene3D G3DSA:3.40.50.300 1 254 3.3E-67 T 11-10-2018 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Pfam PF00512 His Kinase A (phospho-acceptor) domain 531 596 2.6E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Gene3D G3DSA:3.30.565.10 599 754 2.2E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Gene3D G3DSA:3.30.450.40 13 487 1.0E-117 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 SUPERFAMILY SSF47384 516 597 4.51E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Pfam PF00360 Phytochrome region 344 503 6.3E-22 T 11-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Gene3D G3DSA:1.10.287.130 515 598 3.9E-20 T 11-10-2018 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 SUPERFAMILY SSF55785 4 129 6.8E-18 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 SUPERFAMILY SSF55874 586 756 4.58E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Pfam PF08446 PAS fold 14 128 1.8E-7 T 11-10-2018 IPR013654 PAS fold-2 GO:0006355 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 SUPERFAMILY SSF55781 158 324 1.42E-46 T 11-10-2018 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Pfam PF01590 GAF domain 161 317 8.4E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 SMART SM00388 531 597 2.9E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Gene3D G3DSA:3.30.450.270 332 502 1.0E-117 T 11-10-2018 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 SUPERFAMILY SSF55781 311 509 3.34E-28 T 11-10-2018 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Gene3D G3DSA:3.40.50.2300 770 904 9.1E-30 T 11-10-2018 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Pfam PF00072 Response regulator receiver domain 783 898 1.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Gene3D G3DSA:3.30.450.20 18 264 1.0E-117 T 11-10-2018 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 SMART SM00387 643 754 3.5E-42 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 643 752 1.7E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 SUPERFAMILY SSF52172 779 903 4.13E-30 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 708 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 731 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 738 751 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 694 1.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17650 74a9f142cbe2818bde8d43cd617b918c 907 SMART SM00448 781 898 2.9E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 158 171 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 Gene3D G3DSA:3.40.50.300 120 303 1.8E-58 T 11-10-2018 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 SUPERFAMILY SSF46689 343 437 5.08E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 Pfam PF02954 Bacterial regulatory protein, Fis family 396 436 1.7E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 345 354 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 SUPERFAMILY SSF52172 2 178 2.99E-31 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 SMART SM00448 2 113 7.0E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 SUPERFAMILY SSF52540 134 366 5.91E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 SMART SM00382 154 296 3.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.6E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.6E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 Gene3D G3DSA:3.40.50.2300 3 119 9.7E-23 T 11-10-2018 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 Pfam PF00158 Sigma-54 interaction domain 134 299 1.9E-62 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 Pfam PF00072 Response regulator receiver domain 4 112 8.5E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 Gene3D G3DSA:1.10.8.60 304 368 1.3E-21 T 11-10-2018 AVL55_11990 62ca77cc2c3ca22220601f46dd1a19e9 443 Gene3D G3DSA:1.10.10.60 369 439 1.3E-15 T 11-10-2018 AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 SUPERFAMILY SSF46600 189 242 3.92E-14 T 11-10-2018 IPR036876 UVR domain superfamily AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 Gene3D G3DSA:3.30.420.340 376 547 7.9E-48 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 SUPERFAMILY SSF82771 16 99 1.96E-23 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 584 1.7E-210 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 Gene3D G3DSA:3.40.1440.10 5 101 4.2E-33 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 Pfam PF14520 Helix-hairpin-helix domain 552 603 5.9E-7 T 11-10-2018 AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 382 537 2.1E-48 T 11-10-2018 IPR001162 UvrC family homology region AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 Pfam PF01541 GIY-YIG catalytic domain 17 92 2.3E-10 T 11-10-2018 IPR000305 GIY-YIG endonuclease AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 SUPERFAMILY SSF47781 502 604 1.72E-21 T 11-10-2018 IPR010994 RuvA domain 2-like AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 Gene3D G3DSA:1.10.150.20 550 605 2.8E-22 T 11-10-2018 AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 SMART SM00465 16 97 3.8E-22 T 11-10-2018 IPR000305 GIY-YIG endonuclease AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 602 28.541 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 SMART SM00278 551 570 3.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 SMART SM00278 583 602 1.1 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_10855 8b65a3b3e2a38e326d0dbe7dc7565045 605 Pfam PF02151 UvrB/uvrC motif 204 237 9.8E-12 T 11-10-2018 IPR001943 UVR domain GO:0005515 AVL55_11945 a3b7242ecb93e640bbdd8d0aba2b66fe 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 1.1E-29 T 11-10-2018 IPR021250 Protein of unknown function DUF2789 AVL55_11945 a3b7242ecb93e640bbdd8d0aba2b66fe 77 Gene3D G3DSA:1.10.10.1130 1 77 3.4E-28 T 11-10-2018 AVL55_09110 05752f288623a716c08e43bfce3e1660 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 64 5.0E-37 T 11-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 AVL55_09110 05752f288623a716c08e43bfce3e1660 72 PRINTS PR00050 Cold shock protein signature 4 19 6.8E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_09110 05752f288623a716c08e43bfce3e1660 72 PRINTS PR00050 Cold shock protein signature 40 58 6.8E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_09110 05752f288623a716c08e43bfce3e1660 72 PRINTS PR00050 Cold shock protein signature 25 34 6.8E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_09110 05752f288623a716c08e43bfce3e1660 72 SUPERFAMILY SSF50249 1 64 1.78E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_09110 05752f288623a716c08e43bfce3e1660 72 Pfam PF00313 'Cold-shock' DNA-binding domain 4 64 7.1E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_09110 05752f288623a716c08e43bfce3e1660 72 Gene3D G3DSA:2.40.50.140 2 65 2.4E-28 T 11-10-2018 AVL55_09110 05752f288623a716c08e43bfce3e1660 72 PIRSF PIRSF002599 1 71 5.4E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AVL55_09110 05752f288623a716c08e43bfce3e1660 72 SMART SM00357 3 67 1.9E-25 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AVL55_09110 05752f288623a716c08e43bfce3e1660 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site AVL55_08705 77808812b43f327b0dcaefe88b1e7080 224 Gene3D G3DSA:3.40.50.300 1 207 5.8E-62 T 11-10-2018 AVL55_08705 77808812b43f327b0dcaefe88b1e7080 224 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 196 9.8E-58 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AVL55_08705 77808812b43f327b0dcaefe88b1e7080 224 Pfam PF02223 Thymidylate kinase 8 196 9.8E-51 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AVL55_08705 77808812b43f327b0dcaefe88b1e7080 224 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AVL55_08705 77808812b43f327b0dcaefe88b1e7080 224 Hamap MF_00165 Thymidylate kinase [tmk]. 4 204 26.559 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AVL55_08705 77808812b43f327b0dcaefe88b1e7080 224 SUPERFAMILY SSF52540 1 210 2.81E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17430 3a1118ac951a96d8821c2b08a5c8b332 975 SUPERFAMILY SSF69318 568 897 2.62E-14 T 11-10-2018 AVL55_17430 3a1118ac951a96d8821c2b08a5c8b332 975 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 734 795 1.5E-6 T 11-10-2018 AVL55_14430 45a7fb0ecefc07fd65d9cd5ab7e9770a 672 Pfam PF00563 EAL domain 428 658 2.7E-70 T 11-10-2018 IPR001633 EAL domain AVL55_14430 45a7fb0ecefc07fd65d9cd5ab7e9770a 672 Gene3D G3DSA:3.30.70.270 239 415 5.5E-48 T 11-10-2018 AVL55_14430 45a7fb0ecefc07fd65d9cd5ab7e9770a 672 Gene3D G3DSA:3.20.20.450 420 671 6.8E-88 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_14430 45a7fb0ecefc07fd65d9cd5ab7e9770a 672 SUPERFAMILY SSF141868 428 670 1.7E-81 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_14430 45a7fb0ecefc07fd65d9cd5ab7e9770a 672 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 9.5E-40 T 11-10-2018 IPR000160 GGDEF domain AVL55_14430 45a7fb0ecefc07fd65d9cd5ab7e9770a 672 SUPERFAMILY SSF55073 258 413 7.85E-42 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_14430 45a7fb0ecefc07fd65d9cd5ab7e9770a 672 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 410 1.9E-37 T 11-10-2018 IPR000160 GGDEF domain AVL55_14430 45a7fb0ecefc07fd65d9cd5ab7e9770a 672 SMART SM00052 422 663 2.5E-89 T 11-10-2018 IPR001633 EAL domain AVL55_14430 45a7fb0ecefc07fd65d9cd5ab7e9770a 672 SMART SM00267 242 412 3.6E-47 T 11-10-2018 IPR000160 GGDEF domain AVL55_08130 3aae163a77a5a631fa71ca68e4dea940 738 Pfam PF13614 AAA domain 553 694 4.1E-11 T 11-10-2018 IPR025669 AAA domain AVL55_08130 3aae163a77a5a631fa71ca68e4dea940 738 Pfam PF02706 Chain length determinant protein 17 108 2.1E-12 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AVL55_08130 3aae163a77a5a631fa71ca68e4dea940 738 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 719 9.6E-45 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AVL55_08130 3aae163a77a5a631fa71ca68e4dea940 738 SUPERFAMILY SSF52540 542 729 1.13E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08130 3aae163a77a5a631fa71ca68e4dea940 738 Gene3D G3DSA:3.40.50.300 465 736 3.1E-68 T 11-10-2018 AVL55_08130 3aae163a77a5a631fa71ca68e4dea940 738 Pfam PF13807 G-rich domain on putative tyrosine kinase 400 470 5.0E-10 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain AVL55_05665 58921c3155464c4b264af9cca545ee02 139 Pfam PF03203 MerC mercury resistance protein 13 124 3.9E-16 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AVL55_05665 58921c3155464c4b264af9cca545ee02 139 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 25 137 6.0E-58 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AVL55_00325 1e67c97d31072b13a2d26e9019a782b9 103 SMART SM00450 5 100 3.7E-17 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_00325 1e67c97d31072b13a2d26e9019a782b9 103 Gene3D G3DSA:3.40.250.10 1 100 4.4E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_00325 1e67c97d31072b13a2d26e9019a782b9 103 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 103 29.552 T 11-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 AVL55_00325 1e67c97d31072b13a2d26e9019a782b9 103 Pfam PF00581 Rhodanese-like domain 17 96 1.7E-14 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_00325 1e67c97d31072b13a2d26e9019a782b9 103 SUPERFAMILY SSF52821 1 98 5.5E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_11510 d493195374382edce84299d7f6804001 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 2.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_11510 d493195374382edce84299d7f6804001 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 2.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_11510 d493195374382edce84299d7f6804001 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 96 2.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_11510 d493195374382edce84299d7f6804001 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 2.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_11510 d493195374382edce84299d7f6804001 259 Gene3D G3DSA:3.40.50.1820 3 257 5.9E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_11510 d493195374382edce84299d7f6804001 259 Pfam PF12697 Alpha/beta hydrolase family 17 249 2.6E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_11510 d493195374382edce84299d7f6804001 259 SUPERFAMILY SSF53474 3 257 1.01E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_15735 74b8390cef02866e0d8f4e8c61acebec 291 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 4 287 1.1E-129 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AVL55_15735 74b8390cef02866e0d8f4e8c61acebec 291 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AVL55_15735 74b8390cef02866e0d8f4e8c61acebec 291 SUPERFAMILY SSF51621 4 286 2.2E-101 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AVL55_15735 74b8390cef02866e0d8f4e8c61acebec 291 Pfam PF13714 Phosphoenolpyruvate phosphomutase 8 251 2.5E-52 T 11-10-2018 AVL55_15735 74b8390cef02866e0d8f4e8c61acebec 291 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 1 288 49.703 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AVL55_15735 74b8390cef02866e0d8f4e8c61acebec 291 Gene3D G3DSA:3.20.20.60 1 291 5.9E-107 T 11-10-2018 AVL55_04340 9e25e72c78e809f18f5095bac2f15874 170 SMART SM00091 12 78 0.0018 T 11-10-2018 IPR000014 PAS domain AVL55_04340 9e25e72c78e809f18f5095bac2f15874 170 SUPERFAMILY SSF55785 16 125 9.07E-10 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_04340 9e25e72c78e809f18f5095bac2f15874 170 Gene3D G3DSA:3.30.450.20 3 140 5.6E-33 T 11-10-2018 AVL55_04340 9e25e72c78e809f18f5095bac2f15874 170 Pfam PF08448 PAS fold 21 138 7.8E-7 T 11-10-2018 IPR013656 PAS fold-4 AVL55_17935 0c1e2b8e602641b84cfbdf05e9929527 266 SMART SM00962 58 259 3.4E-124 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_17935 0c1e2b8e602641b84cfbdf05e9929527 266 Gene3D G3DSA:1.20.120.140 2 257 5.4E-105 T 11-10-2018 AVL55_17935 0c1e2b8e602641b84cfbdf05e9929527 266 Pfam PF00448 SRP54-type protein, GTPase domain 58 258 9.7E-79 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_17935 0c1e2b8e602641b84cfbdf05e9929527 266 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 1 259 57.474 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AVL55_17935 0c1e2b8e602641b84cfbdf05e9929527 266 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 232 245 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_17935 0c1e2b8e602641b84cfbdf05e9929527 266 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 2 258 3.2E-108 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AVL55_17935 0c1e2b8e602641b84cfbdf05e9929527 266 Gene3D G3DSA:3.40.50.300 51 247 5.4E-105 T 11-10-2018 AVL55_17935 0c1e2b8e602641b84cfbdf05e9929527 266 SMART SM00382 57 258 2.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_17935 0c1e2b8e602641b84cfbdf05e9929527 266 SUPERFAMILY SSF52540 56 259 2.89E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 1.4E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 SUPERFAMILY SSF81923 4 156 3.79E-42 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 SUPERFAMILY SSF52540 546 852 4.09E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.5E-11 T 11-10-2018 IPR004176 Clp, N-terminal AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.0E-13 T 11-10-2018 IPR004176 Clp, N-terminal AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 SMART SM00382 198 343 7.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 SMART SM00382 597 736 1.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.0E-56 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Gene3D G3DSA:3.40.50.300 158 347 1.7E-74 T 11-10-2018 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Gene3D G3DSA:1.10.1780.10 1 148 2.2E-31 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Gene3D G3DSA:1.10.8.60 766 857 4.1E-27 T 11-10-2018 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 2.0E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 SMART SM01086 766 855 3.8E-35 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Gene3D G3DSA:3.40.50.300 550 764 3.0E-90 T 11-10-2018 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 Gene3D G3DSA:3.40.50.300 348 544 3.6E-66 T 11-10-2018 AVL55_13240 81822faf9dcedbc54e06443c55e067b1 858 SUPERFAMILY SSF52540 159 545 8.98E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11505 bb31830d5e99c5d28f888daf4edad96e 132 Pfam PF00816 H-NS histone family 34 125 2.3E-15 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AVL55_11505 bb31830d5e99c5d28f888daf4edad96e 132 Gene3D G3DSA:1.10.287.1050 1 81 2.3E-16 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AVL55_11505 bb31830d5e99c5d28f888daf4edad96e 132 SUPERFAMILY SSF81273 88 131 6.67E-10 T 11-10-2018 AVL55_11505 bb31830d5e99c5d28f888daf4edad96e 132 PIRSF PIRSF002096 1 131 9.4E-43 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AVL55_11505 bb31830d5e99c5d28f888daf4edad96e 132 Gene3D G3DSA:4.10.430.10 88 132 3.1E-18 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AVL55_11505 bb31830d5e99c5d28f888daf4edad96e 132 SUPERFAMILY SSF81273 2 58 3.34E-12 T 11-10-2018 AVL55_11505 bb31830d5e99c5d28f888daf4edad96e 132 SMART SM00528 84 131 1.2E-12 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AVL55_18005 2daea81d38e89a35a1d91aeb9f48bbb4 544 Gene3D G3DSA:3.90.1150.170 45 518 2.3E-96 T 11-10-2018 AVL55_18005 2daea81d38e89a35a1d91aeb9f48bbb4 544 Gene3D G3DSA:3.40.640.10 118 382 2.3E-96 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_18005 2daea81d38e89a35a1d91aeb9f48bbb4 544 SUPERFAMILY SSF53383 18 523 1.52E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_18005 2daea81d38e89a35a1d91aeb9f48bbb4 544 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 60 436 1.2E-46 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AVL55_18005 2daea81d38e89a35a1d91aeb9f48bbb4 544 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 4 521 1.3E-258 T 11-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AVL55_18585 ba0153742dc3328422e8df6f87b6e2e1 461 Pfam PF00772 DnaB-like helicase N terminal domain 17 118 2.5E-38 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AVL55_18585 ba0153742dc3328422e8df6f87b6e2e1 461 SUPERFAMILY SSF48024 15 126 1.01E-39 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AVL55_18585 ba0153742dc3328422e8df6f87b6e2e1 461 Pfam PF03796 DnaB-like helicase C terminal domain 195 451 1.5E-112 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AVL55_18585 ba0153742dc3328422e8df6f87b6e2e1 461 SUPERFAMILY SSF52540 193 444 7.28E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18585 ba0153742dc3328422e8df6f87b6e2e1 461 SMART SM00382 212 418 3.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_18585 ba0153742dc3328422e8df6f87b6e2e1 461 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 17 453 1.1E-175 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AVL55_18585 ba0153742dc3328422e8df6f87b6e2e1 461 Gene3D G3DSA:1.10.860.10 9 173 2.3E-56 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AVL55_18585 ba0153742dc3328422e8df6f87b6e2e1 461 Gene3D G3DSA:3.40.50.300 174 454 8.3E-106 T 11-10-2018 AVL55_19960 a78b16faaf2aba1ab3c0657e9993f9e7 399 SUPERFAMILY SSF109604 149 317 6.52E-36 T 11-10-2018 AVL55_19960 a78b16faaf2aba1ab3c0657e9993f9e7 399 SMART SM00471 152 287 2.0E-9 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_19960 a78b16faaf2aba1ab3c0657e9993f9e7 399 Gene3D G3DSA:1.10.3210.10 3 319 1.2E-73 T 11-10-2018 AVL55_19960 a78b16faaf2aba1ab3c0657e9993f9e7 399 TIGRFAM TIGR00277 HDIG: HDIG domain 156 246 7.9E-9 T 11-10-2018 IPR006675 HDIG domain AVL55_19960 a78b16faaf2aba1ab3c0657e9993f9e7 399 Pfam PF11871 Domain of unknown function (DUF3391) 2 122 4.1E-15 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 AVL55_19960 a78b16faaf2aba1ab3c0657e9993f9e7 399 Pfam PF01966 HD domain 157 277 5.3E-19 T 11-10-2018 IPR006674 HD domain AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 Gene3D G3DSA:3.30.1360.120 1 125 3.6E-39 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 376 1.4E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 15 462 7.1E-109 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 Gene3D G3DSA:3.40.50.300 221 390 5.8E-106 T 11-10-2018 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 SUPERFAMILY SSF52540 76 381 8.36E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 Pfam PF10396 GTP-binding protein TrmE N-terminus 10 124 1.4E-35 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 Pfam PF01926 50S ribosome-binding GTPase 222 340 2.6E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 Gene3D G3DSA:1.20.120.430 126 462 5.8E-106 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 PRINTS PR00449 Transforming protein P21 ras signature 330 343 1.3E-5 T 11-10-2018 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 PRINTS PR00449 Transforming protein P21 ras signature 362 384 1.3E-5 T 11-10-2018 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 PRINTS PR00449 Transforming protein P21 ras signature 221 242 1.3E-5 T 11-10-2018 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 9 462 32.939 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 SUPERFAMILY SSF116878 125 462 2.48E-50 T 11-10-2018 AVL55_20070 b04429e4c9b29e5f2b335a417c2d4069 462 Pfam PF12631 MnmE helical domain 127 459 3.7E-61 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AVL55_17920 793aef2d70790e1b095bcb7758a9aaf1 411 PIRSF PIRSF003180 1 402 1.9E-115 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AVL55_17920 793aef2d70790e1b095bcb7758a9aaf1 411 SUPERFAMILY SSF141868 5 188 6.15E-23 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_17920 793aef2d70790e1b095bcb7758a9aaf1 411 Gene3D G3DSA:3.20.20.450 60 194 7.2E-15 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_17920 793aef2d70790e1b095bcb7758a9aaf1 411 Gene3D G3DSA:1.10.3210.10 195 359 7.6E-20 T 11-10-2018 AVL55_17920 793aef2d70790e1b095bcb7758a9aaf1 411 Pfam PF00563 EAL domain 72 188 6.4E-11 T 11-10-2018 IPR001633 EAL domain AVL55_17920 793aef2d70790e1b095bcb7758a9aaf1 411 Pfam PF08668 HDOD domain 196 317 3.6E-10 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AVL55_17920 793aef2d70790e1b095bcb7758a9aaf1 411 SUPERFAMILY SSF109604 179 397 5.96E-39 T 11-10-2018 AVL55_06400 7a87ce4b6817d2b71af958fe4dab2e96 472 Gene3D G3DSA:3.50.30.30 106 256 3.6E-137 T 11-10-2018 AVL55_06400 7a87ce4b6817d2b71af958fe4dab2e96 472 Gene3D G3DSA:3.40.630.10 53 456 3.6E-137 T 11-10-2018 AVL55_06400 7a87ce4b6817d2b71af958fe4dab2e96 472 Pfam PF02225 PA domain 152 239 3.9E-5 T 11-10-2018 IPR003137 PA domain AVL55_06400 7a87ce4b6817d2b71af958fe4dab2e96 472 SUPERFAMILY SSF53187 226 463 1.91E-54 T 11-10-2018 AVL55_06400 7a87ce4b6817d2b71af958fe4dab2e96 472 Pfam PF04389 Peptidase family M28 267 452 4.9E-27 T 11-10-2018 IPR007484 Peptidase M28 AVL55_13335 c735c710f22090c232eff74aeafd0205 140 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 133 2.4E-42 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AVL55_13335 c735c710f22090c232eff74aeafd0205 140 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 22.095 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AVL55_13335 c735c710f22090c232eff74aeafd0205 140 Gene3D G3DSA:1.10.940.10 1 139 7.4E-47 T 11-10-2018 IPR035926 NusB-like superfamily AVL55_13335 c735c710f22090c232eff74aeafd0205 140 SUPERFAMILY SSF48013 3 137 3.79E-39 T 11-10-2018 IPR035926 NusB-like superfamily AVL55_13335 c735c710f22090c232eff74aeafd0205 140 Pfam PF01029 NusB family 7 132 1.4E-32 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 512 3.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SMART SM00387 397 513 1.7E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 PIRSF PIRSF003182 8 783 4.6E-283 T 11-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 348 6.7E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SMART SM00086 230 272 5.6E-4 T 11-10-2018 IPR001610 PAC motif AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Pfam PF01627 Hpt domain 692 767 3.1E-13 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 158 278 5.8E-17 T 11-10-2018 IPR000014 PAS domain AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Gene3D G3DSA:1.10.287.130 275 351 5.5E-19 T 11-10-2018 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Gene3D G3DSA:1.10.287.970 6 92 9.2E-13 T 11-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SUPERFAMILY SSF47226 668 779 2.49E-26 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Gene3D G3DSA:3.30.565.10 352 514 7.2E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SMART SM00448 528 640 1.5E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Pfam PF08448 PAS fold 165 274 1.2E-17 T 11-10-2018 IPR013656 PAS fold-4 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Pfam PF00072 Response regulator receiver domain 530 639 2.4E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SUPERFAMILY SSF55785 144 270 1.4E-22 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Gene3D G3DSA:3.30.450.20 146 274 3.5E-23 T 11-10-2018 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SMART SM00091 158 224 6.3E-7 T 11-10-2018 IPR000014 PAS domain AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Gene3D G3DSA:1.20.120.160 661 782 4.0E-29 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 Gene3D G3DSA:3.40.50.2300 515 643 1.0E-32 T 11-10-2018 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SUPERFAMILY SSF47384 273 351 1.92E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 1.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 1.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 1.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 1.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SUPERFAMILY SSF52172 526 645 6.97E-30 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SMART SM00388 285 350 2.3E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_15775 93bf7c4b65a1c3b4f555f4ea79c5140c 784 SUPERFAMILY SSF55874 339 514 3.67E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_19535 d24ae5976b342778f50518cd896202ae 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 44.724 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AVL55_19535 d24ae5976b342778f50518cd896202ae 192 Pfam PF01106 NifU-like domain 111 174 6.0E-18 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AVL55_19535 d24ae5976b342778f50518cd896202ae 192 SUPERFAMILY SSF117916 95 185 1.18E-22 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AVL55_19535 d24ae5976b342778f50518cd896202ae 192 SUPERFAMILY SSF89360 1 97 1.04E-22 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AVL55_19535 d24ae5976b342778f50518cd896202ae 192 Gene3D G3DSA:3.30.300.130 101 189 1.9E-18 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AVL55_19535 d24ae5976b342778f50518cd896202ae 192 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 192 3.9E-99 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AVL55_19535 d24ae5976b342778f50518cd896202ae 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 180 3.0E-24 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AVL55_19535 d24ae5976b342778f50518cd896202ae 192 Gene3D G3DSA:2.60.300.12 1 98 3.0E-15 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AVL55_19535 d24ae5976b342778f50518cd896202ae 192 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 4.0E-12 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 PIRSF PIRSF000097 3 277 1.3E-71 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 PRINTS PR00069 Aldo-keto reductase signature 126 143 1.3E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 PRINTS PR00069 Aldo-keto reductase signature 161 190 1.3E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 PRINTS PR00069 Aldo-keto reductase signature 93 111 1.3E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 PRINTS PR00069 Aldo-keto reductase signature 33 57 1.3E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 PRINTS PR00069 Aldo-keto reductase signature 198 222 1.3E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 Pfam PF00248 Aldo/keto reductase family 14 262 2.9E-49 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 SUPERFAMILY SSF51430 6 272 1.17E-82 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 126 143 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AVL55_05565 71b941b0e95d3a33a4cf054ab0c131c6 278 Gene3D G3DSA:3.20.20.100 3 274 6.2E-88 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_02600 b22e64eea8f112e78fca6901a0f6acb7 279 Gene3D G3DSA:2.70.70.10 140 276 1.4E-35 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_02600 b22e64eea8f112e78fca6901a0f6acb7 279 SMART SM00257 38 82 4.0E-10 T 11-10-2018 IPR018392 LysM domain AVL55_02600 b22e64eea8f112e78fca6901a0f6acb7 279 SUPERFAMILY SSF51261 39 275 8.89E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_02600 b22e64eea8f112e78fca6901a0f6acb7 279 Gene3D G3DSA:3.10.350.10 36 81 6.7E-13 T 11-10-2018 IPR036779 LysM domain superfamily AVL55_02600 b22e64eea8f112e78fca6901a0f6acb7 279 Pfam PF01551 Peptidase family M23 178 271 4.3E-28 T 11-10-2018 IPR016047 Peptidase M23 AVL55_02600 b22e64eea8f112e78fca6901a0f6acb7 279 Pfam PF01476 LysM domain 39 81 4.4E-11 T 11-10-2018 IPR018392 LysM domain AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 Pfam PF16750 Sensor domain of 2-component histidine kinase 37 144 1.8E-35 T 11-10-2018 IPR031930 2-component histidine kinase, sensor domain AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 SUPERFAMILY SSF55874 281 440 7.73E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 Gene3D G3DSA:1.10.287.130 177 291 5.0E-26 T 11-10-2018 AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 SUPERFAMILY SSF158472 173 224 1.96E-6 T 11-10-2018 AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 SUPERFAMILY SSF47384 212 289 3.53E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 Gene3D G3DSA:3.30.565.10 295 468 2.8E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 SMART SM00387 335 470 1.1E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 SMART SM00304 173 228 2.5E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 468 1.1E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 290 6.4E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 Gene3D G3DSA:3.30.450.170 25 145 3.5E-36 T 11-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 SMART SM00388 229 291 2.6E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 3.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 3.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18625 1fe5bf890ecfa6e44a2fc7d21c373a6b 476 Pfam PF00672 HAMP domain 173 222 3.4E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_15905 e7ddf3930d1af1da3aeb20cb514a5c12 190 SUPERFAMILY SSF47616 86 180 4.38E-8 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_15905 e7ddf3930d1af1da3aeb20cb514a5c12 190 SUPERFAMILY SSF52833 1 78 2.94E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_15905 e7ddf3930d1af1da3aeb20cb514a5c12 190 Gene3D G3DSA:3.40.30.10 1 77 7.3E-18 T 11-10-2018 AVL55_15905 e7ddf3930d1af1da3aeb20cb514a5c12 190 Gene3D G3DSA:1.20.1050.10 78 180 1.5E-6 T 11-10-2018 AVL55_15905 e7ddf3930d1af1da3aeb20cb514a5c12 190 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 72 1.7E-11 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 SUPERFAMILY SSF51206 8 113 2.05E-9 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 Gene3D G3DSA:3.10.580.10 131 275 1.6E-30 T 11-10-2018 AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 465 604 6.6E-36 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 SUPERFAMILY SSF54631 143 266 3.92E-28 T 11-10-2018 AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 SMART SM00116 155 202 6.4E-6 T 11-10-2018 IPR000644 CBS domain AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 SMART SM00116 219 268 1.4E-7 T 11-10-2018 IPR000644 CBS domain AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 Pfam PF00571 CBS domain 149 201 2.7E-10 T 11-10-2018 IPR000644 CBS domain AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 Pfam PF00571 CBS domain 212 266 1.0E-9 T 11-10-2018 IPR000644 CBS domain AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 Pfam PF03445 Putative nucleotidyltransferase DUF294 294 428 5.5E-36 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AVL55_17165 066861f0ba8e718bd3240f8bd61731d0 609 Gene3D G3DSA:2.60.120.10 2 130 2.3E-7 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 Gene3D G3DSA:3.30.70.3280 390 529 6.0E-51 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 Gene3D G3DSA:3.40.50.300 110 275 1.8E-114 T 11-10-2018 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 174 2.5E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.943 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 528 1.3E-297 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 Gene3D G3DSA:3.40.50.300 72 379 1.8E-114 T 11-10-2018 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 SUPERFAMILY SSF54980 393 468 2.77E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.5E-45 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 SUPERFAMILY SSF52540 9 277 2.7E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 7.6E-11 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 Pfam PF00009 Elongation factor Tu GTP binding domain 12 277 1.3E-45 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06145 0cad8ee2966300c7962e64e6b09fd78c 529 SUPERFAMILY SSF50447 262 393 6.13E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_01395 ac594a625b30bb59b1ebd9f68b1717c6 117 Pfam PF13473 Cupredoxin-like domain 12 116 1.9E-25 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain AVL55_01395 ac594a625b30bb59b1ebd9f68b1717c6 117 SUPERFAMILY SSF49503 15 116 3.86E-13 T 11-10-2018 IPR008972 Cupredoxin AVL55_01395 ac594a625b30bb59b1ebd9f68b1717c6 117 Gene3D G3DSA:2.60.40.420 23 117 1.1E-21 T 11-10-2018 IPR008972 Cupredoxin AVL55_17715 1d154e45ea837f05dc80d5d170499167 84 SUPERFAMILY SSF52172 1 81 9.82E-16 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_17715 1d154e45ea837f05dc80d5d170499167 84 Pfam PF00072 Response regulator receiver domain 1 62 3.6E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17715 1d154e45ea837f05dc80d5d170499167 84 Gene3D G3DSA:3.40.50.2300 1 83 1.0E-16 T 11-10-2018 AVL55_14160 0ffe12b072a96583c162410e70859a39 354 Pfam PF13401 AAA domain 42 170 6.4E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_14160 0ffe12b072a96583c162410e70859a39 354 SUPERFAMILY SSF52540 5 264 1.41E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14160 0ffe12b072a96583c162410e70859a39 354 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 268 8.7E-110 T 11-10-2018 IPR017466 ATPase, secretion system, PEP-CTERM, predicted AVL55_14160 0ffe12b072a96583c162410e70859a39 354 SMART SM00382 42 204 0.0016 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_14160 0ffe12b072a96583c162410e70859a39 354 Gene3D G3DSA:3.40.50.300 26 184 4.4E-12 T 11-10-2018 AVL55_16810 f401af8bd8895a2ec100fc7b44e24af8 587 Pfam PF00691 OmpA family 480 565 1.9E-10 T 11-10-2018 IPR006665 OmpA-like domain AVL55_16810 f401af8bd8895a2ec100fc7b44e24af8 587 SUPERFAMILY SSF103088 468 566 1.15E-14 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_16810 f401af8bd8895a2ec100fc7b44e24af8 587 Gene3D G3DSA:3.30.1330.60 459 579 3.5E-14 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_16810 f401af8bd8895a2ec100fc7b44e24af8 587 PRINTS PR01021 OMPA domain signature 518 533 4.4E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_16810 f401af8bd8895a2ec100fc7b44e24af8 587 PRINTS PR01021 OMPA domain signature 533 549 4.4E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_04630 f580e113d2a2083e1427e2d30378ae35 182 Gene3D G3DSA:3.40.1580.20 1 182 1.4E-65 T 11-10-2018 IPR038228 Syd superfamily AVL55_04630 f580e113d2a2083e1427e2d30378ae35 182 Hamap MF_01104 Protein Syd [syd]. 3 182 32.385 T 11-10-2018 IPR009948 Syd GO:0009898 AVL55_04630 f580e113d2a2083e1427e2d30378ae35 182 Pfam PF07348 Syd protein (SUKH-2) 7 180 4.6E-61 T 11-10-2018 IPR009948 Syd GO:0009898 AVL55_02985 11135a4fff2a48143f1cfe21ac096130 532 Gene3D G3DSA:3.30.70.270 348 530 4.1E-53 T 11-10-2018 AVL55_02985 11135a4fff2a48143f1cfe21ac096130 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 525 5.2E-42 T 11-10-2018 IPR000160 GGDEF domain AVL55_02985 11135a4fff2a48143f1cfe21ac096130 532 SMART SM00267 351 529 5.4E-55 T 11-10-2018 IPR000160 GGDEF domain AVL55_02985 11135a4fff2a48143f1cfe21ac096130 532 SUPERFAMILY SSF55073 367 528 7.3E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_02985 11135a4fff2a48143f1cfe21ac096130 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 528 2.4E-45 T 11-10-2018 IPR000160 GGDEF domain AVL55_00505 87c49c40d0524b880d205118ce2b2dbe 256 SUPERFAMILY SSF110399 1 235 3.27E-79 T 11-10-2018 AVL55_00505 87c49c40d0524b880d205118ce2b2dbe 256 Gene3D G3DSA:3.20.20.70 1 254 1.3E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_00505 87c49c40d0524b880d205118ce2b2dbe 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 41.361 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AVL55_00505 87c49c40d0524b880d205118ce2b2dbe 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 5.5E-106 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 PIRSF PIRSF036480 2 284 1.5E-110 T 11-10-2018 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 SUPERFAMILY SSF55021 4 85 6.34E-15 T 11-10-2018 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 2.6E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 2.6E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 2.6E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 2.6E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 2.6E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 2.6E-55 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 SUPERFAMILY SSF53328 89 283 2.09E-55 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 Pfam PF01842 ACT domain 6 58 1.0E-7 T 11-10-2018 IPR002912 ACT domain AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 45.043 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 Pfam PF00551 Formyl transferase 89 262 2.8E-36 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 Gene3D G3DSA:3.30.70.260 1 87 1.7E-25 T 11-10-2018 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 1.8E-103 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AVL55_01690 a3ebf572581f8831400c36a7e55c4a98 284 Gene3D G3DSA:3.40.50.170 88 284 1.3E-68 T 11-10-2018 AVL55_15440 be8884d5775d66a8ac2fe2e6da473e5e 111 Gene3D G3DSA:3.10.180.10 6 110 2.2E-11 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_15440 be8884d5775d66a8ac2fe2e6da473e5e 111 SUPERFAMILY SSF54593 5 110 3.99E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 SUPERFAMILY SSF58014 44 141 3.4E-29 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 PRINTS PR00773 GrpE protein signature 149 164 4.0E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 PRINTS PR00773 GrpE protein signature 66 82 4.0E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 PRINTS PR00773 GrpE protein signature 176 195 4.0E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 PRINTS PR00773 GrpE protein signature 94 109 4.0E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 Hamap MF_01151 Protein GrpE [grpE]. 9 197 21.907 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 Pfam PF01025 GrpE 37 196 3.8E-54 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 ProSitePatterns PS01071 grpE protein signature. 152 195 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 Gene3D G3DSA:3.90.20.20 32 140 1.8E-32 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 Gene3D G3DSA:2.30.22.10 141 197 1.1E-25 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AVL55_07410 53312bfeabfb4c0b5123a487bfae3637 207 SUPERFAMILY SSF51064 143 198 1.44E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 Pfam PF03099 Biotin/lipoate A/B protein ligase family 91 217 1.3E-19 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 SUPERFAMILY SSF46785 8 62 1.34E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 Gene3D G3DSA:1.10.10.10 4 64 2.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 9 326 30.144 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 Gene3D G3DSA:2.30.30.100 280 328 3.4E-16 T 11-10-2018 AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 Pfam PF08279 HTH domain 10 61 3.8E-10 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 SUPERFAMILY SSF55681 84 278 6.75E-56 T 11-10-2018 AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 Pfam PF02237 Biotin protein ligase C terminal domain 284 326 3.0E-6 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 326 3.2E-57 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 Gene3D G3DSA:3.30.930.10 70 279 3.6E-58 T 11-10-2018 AVL55_18180 7fae4f2560e25d4b69d74b5db2b3f7d0 328 SUPERFAMILY SSF50037 280 326 1.97E-9 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 Pfam PF12848 ABC transporter 224 296 7.2E-13 T 11-10-2018 IPR032781 ABC-transporter extension domain AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 Pfam PF00005 ABC transporter 336 469 4.6E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 Pfam PF16326 ABC transporter C-terminal domain 570 638 1.0E-17 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 Gene3D G3DSA:1.10.287.380 560 643 1.1E-23 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 SMART SM00382 344 514 2.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 SMART SM00382 28 230 4.9E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 Pfam PF00005 ABC transporter 19 185 1.5E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 SUPERFAMILY SSF52540 3 244 5.06E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 Gene3D G3DSA:3.40.50.300 2 279 4.5E-68 T 11-10-2018 AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 SUPERFAMILY SSF52540 312 515 1.39E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_10140 85ae8cec6a5870c1a8dcbfa70b2bf05c 646 Gene3D G3DSA:3.40.50.300 281 552 2.4E-63 T 11-10-2018 AVL55_03940 a5a087da6c3099c00cbb6764cc69824a 139 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 88 99 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AVL55_03940 a5a087da6c3099c00cbb6764cc69824a 139 Pfam PF01219 Prokaryotic diacylglycerol kinase 34 135 1.5E-25 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AVL55_03940 a5a087da6c3099c00cbb6764cc69824a 139 Gene3D G3DSA:1.10.3830.10 20 139 7.4E-31 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AVL55_02100 a11fafeaf4628ab37df7b9e4544c6b2b 291 SUPERFAMILY SSF103481 40 137 3.79E-11 T 11-10-2018 AVL55_02100 a11fafeaf4628ab37df7b9e4544c6b2b 291 SUPERFAMILY SSF103481 185 278 4.45E-12 T 11-10-2018 AVL55_02100 a11fafeaf4628ab37df7b9e4544c6b2b 291 Pfam PF00892 EamA-like transporter family 148 274 1.6E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_02100 a11fafeaf4628ab37df7b9e4544c6b2b 291 Pfam PF00892 EamA-like transporter family 13 137 1.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 SUPERFAMILY SSF51445 25 372 1.93E-86 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 Pfam PF00128 Alpha amylase, catalytic domain 86 312 7.0E-11 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 SMART SM00632 380 467 4.5E-36 T 11-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 PRINTS PR00110 Alpha-amylase signature 70 87 5.9E-31 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 PRINTS PR00110 Alpha-amylase signature 189 200 5.9E-31 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 PRINTS PR00110 Alpha-amylase signature 275 287 5.9E-31 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 PRINTS PR00110 Alpha-amylase signature 102 113 5.9E-31 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 PRINTS PR00110 Alpha-amylase signature 217 235 5.9E-31 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 SUPERFAMILY SSF51011 377 468 1.66E-30 T 11-10-2018 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 383 465 1.5E-14 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 SMART SM00642 27 370 1.1E-85 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 Gene3D G3DSA:3.20.20.80 25 375 6.7E-167 T 11-10-2018 AVL55_02135 79164227d06c54b50d8000a4bcac8e59 664 Gene3D G3DSA:2.60.40.1180 376 468 2.7E-33 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 Gene3D G3DSA:3.30.70.610 374 432 5.6E-74 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 Gene3D G3DSA:3.30.1370.20 433 517 5.6E-74 T 11-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 Gene3D G3DSA:3.30.70.610 267 311 1.9E-121 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 Gene3D G3DSA:3.30.43.10 518 565 5.6E-74 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 Gene3D G3DSA:3.30.43.10 11 103 1.9E-121 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 SUPERFAMILY SSF55103 274 565 2.83E-108 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 Pfam PF01565 FAD binding domain 45 164 2.3E-9 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 Gene3D G3DSA:3.30.465.10 104 266 1.9E-121 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 SUPERFAMILY SSF56176 8 271 1.03E-72 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 Pfam PF09330 D-lactate dehydrogenase, membrane binding 276 565 3.0E-133 T 11-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 PIRSF PIRSF000101 2 567 4.0E-269 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_16490 d9fc55c9172915ed571e8f081a7ecf09 577 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 8 566 57.068 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_06405 6984b8183187e3a369ba9013c352eb77 240 Gene3D G3DSA:1.10.1670.10 23 211 2.3E-62 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AVL55_06405 6984b8183187e3a369ba9013c352eb77 240 PIRSF PIRSF001435 10 218 1.4E-41 T 11-10-2018 AVL55_06405 6984b8183187e3a369ba9013c352eb77 240 SUPERFAMILY SSF48150 14 211 1.51E-56 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AVL55_06405 6984b8183187e3a369ba9013c352eb77 240 Hamap MF_00942 Endonuclease III [nth]. 11 220 32.366 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AVL55_06405 6984b8183187e3a369ba9013c352eb77 240 Gene3D G3DSA:1.10.340.30 32 143 2.3E-62 T 11-10-2018 AVL55_06405 6984b8183187e3a369ba9013c352eb77 240 SMART SM00478 49 196 1.2E-43 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AVL55_06405 6984b8183187e3a369ba9013c352eb77 240 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 45 179 9.6E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AVL55_07745 f70946cfee98d70a7a2d6e7269bf98ea 434 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 157 5.4E-15 T 11-10-2018 IPR000160 GGDEF domain AVL55_07745 f70946cfee98d70a7a2d6e7269bf98ea 434 Pfam PF00563 EAL domain 176 408 2.8E-63 T 11-10-2018 IPR001633 EAL domain AVL55_07745 f70946cfee98d70a7a2d6e7269bf98ea 434 SMART SM00052 169 414 3.6E-86 T 11-10-2018 IPR001633 EAL domain AVL55_07745 f70946cfee98d70a7a2d6e7269bf98ea 434 Gene3D G3DSA:3.30.70.270 1 168 1.4E-26 T 11-10-2018 AVL55_07745 f70946cfee98d70a7a2d6e7269bf98ea 434 Gene3D G3DSA:3.20.20.450 170 428 1.2E-82 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_07745 f70946cfee98d70a7a2d6e7269bf98ea 434 SUPERFAMILY SSF141868 176 421 6.93E-78 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_07745 f70946cfee98d70a7a2d6e7269bf98ea 434 SUPERFAMILY SSF55073 9 157 2.82E-25 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_07745 f70946cfee98d70a7a2d6e7269bf98ea 434 SMART SM00267 1 158 2.0E-14 T 11-10-2018 IPR000160 GGDEF domain AVL55_07745 f70946cfee98d70a7a2d6e7269bf98ea 434 Pfam PF00990 Diguanylate cyclase, GGDEF domain 6 152 1.4E-24 T 11-10-2018 IPR000160 GGDEF domain AVL55_16855 8e4c338a938f158a32ca02689b483e81 270 Pfam PF01370 NAD dependent epimerase/dehydratase family 83 187 3.3E-7 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AVL55_16855 8e4c338a938f158a32ca02689b483e81 270 SUPERFAMILY SSF51735 10 262 1.71E-17 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_16855 8e4c338a938f158a32ca02689b483e81 270 Gene3D G3DSA:3.40.50.720 1 268 1.1E-42 T 11-10-2018 AVL55_11645 ef59a17ca22072808a63958123510508 411 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 140 241 3.4E-19 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AVL55_11645 ef59a17ca22072808a63958123510508 411 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 403 7.4E-37 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_11645 ef59a17ca22072808a63958123510508 411 SUPERFAMILY SSF47203 251 405 3.06E-43 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_11645 ef59a17ca22072808a63958123510508 411 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 136 2.1E-19 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AVL55_11645 ef59a17ca22072808a63958123510508 411 Gene3D G3DSA:2.40.110.10 139 253 1.5E-48 T 11-10-2018 AVL55_11645 ef59a17ca22072808a63958123510508 411 SUPERFAMILY SSF56645 2 266 3.27E-71 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_11645 ef59a17ca22072808a63958123510508 411 Gene3D G3DSA:1.20.140.10 254 410 8.6E-39 T 11-10-2018 AVL55_11645 ef59a17ca22072808a63958123510508 411 Gene3D G3DSA:1.10.540.10 1 138 4.1E-54 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AVL55_14895 0ce0fdf9407037625b0f61329c788c61 203 Gene3D G3DSA:3.40.50.300 5 202 1.5E-49 T 11-10-2018 AVL55_14895 0ce0fdf9407037625b0f61329c788c61 203 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 6 199 7.4E-104 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AVL55_14895 0ce0fdf9407037625b0f61329c788c61 203 SUPERFAMILY SSF52540 3 197 1.67E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14895 0ce0fdf9407037625b0f61329c788c61 203 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 6.6E-39 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AVL55_14895 0ce0fdf9407037625b0f61329c788c61 203 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 46.593 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AVL55_14895 0ce0fdf9407037625b0f61329c788c61 203 PIRSF PIRSF005624 1 202 1.4E-48 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 Gene3D G3DSA:1.10.510.10 324 613 6.8E-37 T 11-10-2018 AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 Pfam PF00069 Protein kinase domain 351 585 2.3E-28 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 SUPERFAMILY SSF81606 18 251 1.96E-34 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 SMART SM00332 9 249 2.1E-7 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 456 468 - T 11-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 SUPERFAMILY SSF56112 321 595 2.16E-44 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 Pfam PF13672 Protein phosphatase 2C 28 206 1.3E-17 T 11-10-2018 AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 Gene3D G3DSA:3.60.40.10 3 252 1.1E-34 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 SMART SM00219 327 591 0.0028 T 11-10-2018 IPR020635 Tyrosine-protein kinase, catalytic domain GO:0004713|GO:0006468 AVL55_07705 309f46b6172c9406d25dc0aaba8f60eb 636 SMART SM00331 23 251 2.4E-4 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_20020 c2cb081d43588912a409c3811c7f2a80 73 PRINTS PR00124 ATP synthase C subunit signature 43 68 3.4E-9 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20020 c2cb081d43588912a409c3811c7f2a80 73 PRINTS PR00124 ATP synthase C subunit signature 5 24 3.4E-9 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20020 c2cb081d43588912a409c3811c7f2a80 73 PRINTS PR00124 ATP synthase C subunit signature 26 41 3.4E-9 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20020 c2cb081d43588912a409c3811c7f2a80 73 SUPERFAMILY SSF81333 2 70 2.62E-18 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AVL55_20020 c2cb081d43588912a409c3811c7f2a80 73 Pfam PF00137 ATP synthase subunit C 4 67 1.9E-11 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AVL55_20020 c2cb081d43588912a409c3811c7f2a80 73 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 14.683 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20020 c2cb081d43588912a409c3811c7f2a80 73 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20020 c2cb081d43588912a409c3811c7f2a80 73 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 14 70 7.7E-31 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AVL55_20020 c2cb081d43588912a409c3811c7f2a80 73 Gene3D G3DSA:1.20.20.10 1 72 4.4E-29 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_18930 73bfecfb31845d889c70104316c9cc7f 415 Gene3D G3DSA:1.10.287.1120 147 410 1.1E-60 T 11-10-2018 AVL55_18930 73bfecfb31845d889c70104316c9cc7f 415 Gene3D G3DSA:3.90.220.20 212 365 1.1E-60 T 11-10-2018 AVL55_18930 73bfecfb31845d889c70104316c9cc7f 415 Pfam PF01420 Type I restriction modification DNA specificity domain 3 179 1.3E-14 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AVL55_18930 73bfecfb31845d889c70104316c9cc7f 415 SUPERFAMILY SSF116734 201 414 6.21E-27 T 11-10-2018 AVL55_18930 73bfecfb31845d889c70104316c9cc7f 415 Gene3D G3DSA:3.90.220.20 3 412 1.1E-60 T 11-10-2018 AVL55_18930 73bfecfb31845d889c70104316c9cc7f 415 SUPERFAMILY SSF116734 2 190 6.87E-33 T 11-10-2018 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 15 181 5.5E-36 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 SUPERFAMILY SSF48179 211 507 3.88E-122 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 Gene3D G3DSA:1.10.1040.10 215 471 1.2E-105 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 Gene3D G3DSA:3.40.50.720 2 214 9.4E-46 T 11-10-2018 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 15 507 2.8E-182 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 SUPERFAMILY SSF51735 14 181 7.07E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 83 112 2.5E-37 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 284 311 2.5E-37 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 14 37 2.5E-37 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 393 415 2.5E-37 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 SMART SM01350 213 506 4.2E-211 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 213 505 1.1E-127 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 PIRSF PIRSF000109 9 513 1.2E-185 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 Gene3D G3DSA:1.20.5.320 472 506 9.1E-18 T 11-10-2018 AVL55_12090 1174902d6c4a8c6009d27f19ad4c8ab6 517 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 288 300 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AVL55_01340 275c5d0b1d6ae0e846365bd71a3bd439 229 SMART SM00448 1 112 1.0E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_01340 275c5d0b1d6ae0e846365bd71a3bd439 229 Gene3D G3DSA:3.40.50.2300 1 124 4.6E-34 T 11-10-2018 AVL55_01340 275c5d0b1d6ae0e846365bd71a3bd439 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 220 5.2E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_01340 275c5d0b1d6ae0e846365bd71a3bd439 229 Gene3D G3DSA:1.10.10.10 125 229 3.3E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_01340 275c5d0b1d6ae0e846365bd71a3bd439 229 SMART SM00862 146 221 1.4E-8 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_01340 275c5d0b1d6ae0e846365bd71a3bd439 229 SUPERFAMILY SSF52172 1 175 5.12E-36 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_01340 275c5d0b1d6ae0e846365bd71a3bd439 229 Pfam PF00072 Response regulator receiver domain 3 112 3.9E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_04815 842d5ff93ed25c904a8c09c4fb684e8a 393 Gene3D G3DSA:3.40.50.10610 124 307 7.2E-45 T 11-10-2018 AVL55_04815 842d5ff93ed25c904a8c09c4fb684e8a 393 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 34 120 3.8E-25 T 11-10-2018 IPR032370 Flagellar assembly protein T, N-terminal AVL55_04815 842d5ff93ed25c904a8c09c4fb684e8a 393 Pfam PF16539 Flagellar assembly protein T, middle domain 125 272 1.1E-36 T 11-10-2018 IPR032386 Flagellar assembly protein T, middle domain AVL55_04815 842d5ff93ed25c904a8c09c4fb684e8a 393 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 316 392 9.7E-13 T 11-10-2018 IPR032388 Flagellar assembly protein T, C-terminal AVL55_04815 842d5ff93ed25c904a8c09c4fb684e8a 393 Gene3D G3DSA:3.30.1660.40 33 123 3.1E-29 T 11-10-2018 IPR038180 FlgT, N-terminal domain superfamily AVL55_04815 842d5ff93ed25c904a8c09c4fb684e8a 393 Gene3D G3DSA:2.40.10.410 308 393 3.6E-11 T 11-10-2018 IPR038165 FlgT, C-terminal domain superfamily AVL55_11915 bf0b1a51deb081ab7045830897cea627 400 Gene3D G3DSA:1.10.443.10 168 397 3.0E-21 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_11915 bf0b1a51deb081ab7045830897cea627 400 Gene3D G3DSA:1.10.150.130 48 167 7.1E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AVL55_11915 bf0b1a51deb081ab7045830897cea627 400 SUPERFAMILY SSF56349 58 393 2.0E-24 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_11915 bf0b1a51deb081ab7045830897cea627 400 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 57 140 1.5E-7 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AVL55_11915 bf0b1a51deb081ab7045830897cea627 400 Pfam PF00589 Phage integrase family 180 344 1.2E-10 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_08610 5bb34651005cd7c69a47a76ced12dfc6 774 PIRSF PIRSF000144 1 767 0.0 T 11-10-2018 AVL55_08610 5bb34651005cd7c69a47a76ced12dfc6 774 Gene3D G3DSA:3.40.50.740 121 516 8.4E-70 T 11-10-2018 AVL55_08610 5bb34651005cd7c69a47a76ced12dfc6 774 SUPERFAMILY SSF53706 48 632 6.67E-148 T 11-10-2018 AVL55_08610 5bb34651005cd7c69a47a76ced12dfc6 774 Pfam PF00384 Molybdopterin oxidoreductase 110 495 2.2E-27 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_08610 5bb34651005cd7c69a47a76ced12dfc6 774 SUPERFAMILY SSF50692 645 765 8.14E-18 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AVL55_08610 5bb34651005cd7c69a47a76ced12dfc6 774 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 1.7E-288 T 11-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AVL55_08610 5bb34651005cd7c69a47a76ced12dfc6 774 Gene3D G3DSA:3.40.228.10 186 413 8.4E-70 T 11-10-2018 AVL55_08610 5bb34651005cd7c69a47a76ced12dfc6 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 736 1.9E-10 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AVL55_11200 467ca9b61bd005ab83ba7fd6cbbc531c 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 21 80 1.4E-11 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AVL55_11200 467ca9b61bd005ab83ba7fd6cbbc531c 90 Gene3D G3DSA:3.10.20.30 2 87 1.9E-16 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_11200 467ca9b61bd005ab83ba7fd6cbbc531c 90 SUPERFAMILY SSF54292 19 88 6.55E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AVL55_11200 467ca9b61bd005ab83ba7fd6cbbc531c 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AVL55_14275 c984c51c97788506e3cec0a1c80c9e85 165 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 70 149 6.2E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_14275 c984c51c97788506e3cec0a1c80c9e85 165 Gene3D G3DSA:1.10.760.10 57 159 1.4E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_14275 c984c51c97788506e3cec0a1c80c9e85 165 SUPERFAMILY SSF46626 7 151 7.74E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_14275 c984c51c97788506e3cec0a1c80c9e85 165 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 11 153 7.5E-38 T 11-10-2018 IPR030991 Cytochrome c-550 PedF AVL55_05425 c8bdc521852c70ff9dd72a6a40ce9063 336 SUPERFAMILY SSF56529 76 334 9.16E-60 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AVL55_05425 c8bdc521852c70ff9dd72a6a40ce9063 336 Gene3D G3DSA:3.90.850.10 1 335 7.2E-146 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AVL55_05425 c8bdc521852c70ff9dd72a6a40ce9063 336 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 332 3.3E-42 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 Gene3D G3DSA:3.40.190.10 90 290 1.4E-53 T 11-10-2018 AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 SUPERFAMILY SSF46785 2 85 8.16E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 Pfam PF03466 LysR substrate binding domain 100 293 3.2E-15 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.3E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 SUPERFAMILY SSF53850 90 294 2.02E-42 T 11-10-2018 AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 Gene3D G3DSA:1.10.10.10 1 89 1.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_08800 7b9fc5b11da6349accdc287d4deac0d6 300 Gene3D G3DSA:3.40.190.10 171 265 1.4E-53 T 11-10-2018 AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 Pfam PF03958 Bacterial type II/III secretion system short domain 113 174 1.6E-8 T 11-10-2018 IPR005644 NolW-like AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 Pfam PF03958 Bacterial type II/III secretion system short domain 253 333 1.7E-16 T 11-10-2018 IPR005644 NolW-like AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 Pfam PF03958 Bacterial type II/III secretion system short domain 178 246 6.9E-15 T 11-10-2018 IPR005644 NolW-like AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 PRINTS PR00811 Bacterial general secretion pathway protein D signature 433 457 3.8E-36 T 11-10-2018 IPR001775 GspD/PilQ family AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 PRINTS PR00811 Bacterial general secretion pathway protein D signature 468 478 3.8E-36 T 11-10-2018 IPR001775 GspD/PilQ family AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 PRINTS PR00811 Bacterial general secretion pathway protein D signature 333 343 3.8E-36 T 11-10-2018 IPR001775 GspD/PilQ family AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 PRINTS PR00811 Bacterial general secretion pathway protein D signature 562 580 3.8E-36 T 11-10-2018 IPR001775 GspD/PilQ family AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 PRINTS PR00811 Bacterial general secretion pathway protein D signature 585 599 3.8E-36 T 11-10-2018 IPR001775 GspD/PilQ family AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 Gene3D G3DSA:3.30.1370.120 176 245 1.1E-20 T 11-10-2018 IPR038591 NolW-like superfamily AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 Gene3D G3DSA:3.30.1370.120 9 173 3.5E-51 T 11-10-2018 IPR038591 NolW-like superfamily AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 543 576 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 Gene3D G3DSA:3.30.1370.120 246 335 5.9E-17 T 11-10-2018 IPR038591 NolW-like superfamily AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 Pfam PF00263 Bacterial type II and III secretion system protein 437 598 1.8E-52 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AVL55_19335 74c0fb0791b78ffe4e4c90934a3dee82 665 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 18 607 5.9E-160 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AVL55_00590 23f5a9401fce8eccf4b3402828ccda84 258 SUPERFAMILY SSF53335 9 256 4.65E-67 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_00590 23f5a9401fce8eccf4b3402828ccda84 258 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 5 256 35.796 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AVL55_00590 23f5a9401fce8eccf4b3402828ccda84 258 Pfam PF04445 Putative SAM-dependent methyltransferase 37 254 1.6E-87 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AVL55_00590 23f5a9401fce8eccf4b3402828ccda84 258 Gene3D G3DSA:3.40.50.150 67 258 1.1E-70 T 11-10-2018 AVL55_13040 1e65db611c2872b536e86018470e766e 270 Gene3D G3DSA:3.20.20.70 1 266 7.4E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_13040 1e65db611c2872b536e86018470e766e 270 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 9.3E-107 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AVL55_13040 1e65db611c2872b536e86018470e766e 270 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 42.696 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AVL55_13040 1e65db611c2872b536e86018470e766e 270 SUPERFAMILY SSF51366 1 256 2.2E-68 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AVL55_13040 1e65db611c2872b536e86018470e766e 270 Pfam PF00977 Histidine biosynthesis protein 5 239 2.4E-75 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AVL55_00375 767855fd662b3460e767943e564954ed 397 Pfam PF13657 HipA N-terminal domain 20 113 1.1E-4 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AVL55_00375 767855fd662b3460e767943e564954ed 397 Pfam PF07804 HipA-like C-terminal domain 160 374 1.5E-44 T 11-10-2018 IPR012893 HipA-like, C-terminal AVL55_00015 757badb6d3379729e62e1234f5f89932 362 ProSitePatterns PS00618 RecF protein signature 2. 301 319 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AVL55_00015 757badb6d3379729e62e1234f5f89932 362 SUPERFAMILY SSF52540 1 338 8.06E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00015 757badb6d3379729e62e1234f5f89932 362 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 345 5.6E-27 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AVL55_00015 757badb6d3379729e62e1234f5f89932 362 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 362 84.169 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AVL55_00015 757badb6d3379729e62e1234f5f89932 362 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 358 1.5E-95 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AVL55_00015 757badb6d3379729e62e1234f5f89932 362 Gene3D G3DSA:3.40.50.300 7 335 3.8E-84 T 11-10-2018 AVL55_00015 757badb6d3379729e62e1234f5f89932 362 Gene3D G3DSA:1.20.1050.90 121 300 3.8E-84 T 11-10-2018 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Gene3D G3DSA:3.30.56.10 401 475 1.8E-27 T 11-10-2018 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 3.2E-24 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.203 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Pfam PF01588 Putative tRNA binding domain 46 145 4.0E-25 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Gene3D G3DSA:3.30.70.380 702 795 7.8E-27 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Pfam PF03483 B3/4 domain 212 385 2.5E-68 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AVL55_08250 cca5453a03659c1969540b48d305b615 795 SMART SM00873 212 385 1.7E-95 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Gene3D G3DSA:3.30.56.10 7 179 5.0E-75 T 11-10-2018 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Gene3D G3DSA:2.40.50.140 39 154 5.0E-75 T 11-10-2018 AVL55_08250 cca5453a03659c1969540b48d305b615 795 SUPERFAMILY SSF50249 35 198 1.66E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_08250 cca5453a03659c1969540b48d305b615 795 SUPERFAMILY SSF56037 197 393 8.63E-74 T 11-10-2018 AVL55_08250 cca5453a03659c1969540b48d305b615 795 SUPERFAMILY SSF46955 404 475 4.49E-20 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_08250 cca5453a03659c1969540b48d305b615 795 SUPERFAMILY SSF55681 467 690 3.28E-48 T 11-10-2018 AVL55_08250 cca5453a03659c1969540b48d305b615 795 SMART SM00874 403 471 8.9E-30 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Gene3D G3DSA:3.50.40.10 197 395 5.7E-78 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AVL55_08250 cca5453a03659c1969540b48d305b615 795 SMART SM00896 701 794 4.6E-36 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Gene3D G3DSA:3.30.930.10 488 692 4.6E-56 T 11-10-2018 AVL55_08250 cca5453a03659c1969540b48d305b615 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.6E-19 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AVL55_08250 cca5453a03659c1969540b48d305b615 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.8E-271 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AVL55_08250 cca5453a03659c1969540b48d305b615 795 SUPERFAMILY SSF54991 697 794 3.4E-27 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AVL55_17615 c81df6dba03d2fe7af7af8c2d3f11f43 187 Gene3D G3DSA:1.20.950.20 1 173 1.3E-10 T 11-10-2018 AVL55_17615 c81df6dba03d2fe7af7af8c2d3f11f43 187 Pfam PF01292 Prokaryotic cytochrome b561 13 183 7.1E-20 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AVL55_17615 c81df6dba03d2fe7af7af8c2d3f11f43 187 SUPERFAMILY SSF81342 8 186 5.18E-28 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 SUPERFAMILY SSF52540 190 495 1.38E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 Gene3D G3DSA:3.40.50.300 188 495 9.4E-54 T 11-10-2018 AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 5.3E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 5.3E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 5.3E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 SMART SM00382 210 388 1.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 135 6.1E-42 T 11-10-2018 AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 289 304 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 388 7.6E-85 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 10 492 2.5E-174 T 11-10-2018 IPR004482 Mg chelatase-related protein AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 Gene3D G3DSA:3.30.230.10 1 164 2.0E-6 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 405 492 3.3E-25 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AVL55_19650 e00fbcdffe5511a5d12b8306769056dd 504 SUPERFAMILY SSF54211 8 169 9.86E-26 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 Gene3D G3DSA:1.10.8.60 317 424 2.3E-41 T 11-10-2018 AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 311 7.7E-50 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 Pfam PF06689 ClpX C4-type zinc finger 14 51 2.1E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 SUPERFAMILY SSF57716 14 49 7.27E-12 T 11-10-2018 AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 Gene3D G3DSA:3.40.50.300 63 316 1.0E-109 T 11-10-2018 AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 SMART SM01086 318 413 8.0E-36 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 416 53.601 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 395 2.2E-17 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 413 6.2E-212 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 SMART SM00994 13 52 1.8E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 SMART SM00382 112 273 7.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 Gene3D G3DSA:3.30.50.30 3 53 1.1E-25 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily AVL55_13640 fc3d0e3a190a94681ef7bb5529e698bf 424 SUPERFAMILY SSF52540 63 404 9.22E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 Gene3D G3DSA:1.20.1580.10 90 492 1.5E-246 T 11-10-2018 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 Gene3D G3DSA:3.40.50.300 617 936 1.3E-142 T 11-10-2018 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.853 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 Gene3D G3DSA:3.30.190.20 130 239 1.5E-246 T 11-10-2018 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 SUPERFAMILY SSF52540 621 911 2.49E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 Gene3D G3DSA:3.40.50.300 6 595 1.5E-246 T 11-10-2018 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 Gene3D G3DSA:1.20.1580.10 692 830 1.3E-142 T 11-10-2018 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 Gene3D G3DSA:1.10.8.280 287 403 1.5E-246 T 11-10-2018 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 SUPERFAMILY SSF52540 3 569 6.64E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00915 3429d13c30a1f9f66eab5eb13a94b051 943 Pfam PF00005 ABC transporter 623 860 8.8E-10 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 Gene3D G3DSA:3.40.47.10 1 255 2.6E-93 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 4.4E-197 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.0E-64 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 SUPERFAMILY SSF53901 215 411 2.34E-71 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 Gene3D G3DSA:3.40.47.10 257 401 1.8E-53 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 SMART SM00825 Beta-ketoacyl synthase 6 412 1.8E-15 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 SUPERFAMILY SSF53901 3 252 2.66E-79 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 PIRSF PIRSF000447 1 412 5.1E-194 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AVL55_08690 00c937eb17ac925e47e4649c62960c2c 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.9E-38 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 135 346 3.0E-74 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 Gene3D G3DSA:2.40.30.170 252 352 8.6E-21 T 11-10-2018 AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 Gene3D G3DSA:1.10.287.470 187 223 2.6E-13 T 11-10-2018 AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 236 418 6.7E-31 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 SUPERFAMILY SSF111369 151 350 4.32E-18 T 11-10-2018 AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 Gene3D G3DSA:2.40.50.100 152 186 2.6E-13 T 11-10-2018 AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 Gene3D G3DSA:2.40.30.170 138 151 2.6E-13 T 11-10-2018 AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 Gene3D G3DSA:2.40.420.20 126 137 2.6E-13 T 11-10-2018 AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 Pfam PF11604 Copper binding periplasmic protein CusF 462 517 1.0E-12 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 Gene3D G3DSA:2.40.420.20 353 441 1.7E-22 T 11-10-2018 AVL55_15305 573bbe12c441b39a625cd484ab89e7d5 581 Gene3D G3DSA:2.40.50.320 442 519 1.0E-9 T 11-10-2018 AVL55_11675 a59d1a4d0948d31e21d25b81f6721b31 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 457 1.3E-155 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AVL55_11675 a59d1a4d0948d31e21d25b81f6721b31 457 Pfam PF04055 Radical SAM superfamily 57 226 5.2E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_11675 a59d1a4d0948d31e21d25b81f6721b31 457 SMART SM00729 52 272 3.9E-43 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AVL55_11675 a59d1a4d0948d31e21d25b81f6721b31 457 Gene3D G3DSA:1.10.10.920 364 457 2.0E-27 T 11-10-2018 AVL55_11675 a59d1a4d0948d31e21d25b81f6721b31 457 SUPERFAMILY SSF102114 11 444 1.11E-118 T 11-10-2018 AVL55_11675 a59d1a4d0948d31e21d25b81f6721b31 457 Pfam PF06969 HemN C-terminal domain 363 430 2.5E-6 T 11-10-2018 IPR010723 HemN, C-terminal AVL55_11675 a59d1a4d0948d31e21d25b81f6721b31 457 Gene3D G3DSA:3.80.30.20 5 361 1.1E-111 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AVL55_11675 a59d1a4d0948d31e21d25b81f6721b31 457 PIRSF PIRSF000167 5 454 1.8E-149 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AVL55_03650 2333467c168cb053837d72680dff510d 284 Gene3D G3DSA:3.40.50.1820 24 282 8.0E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_03650 2333467c168cb053837d72680dff510d 284 SUPERFAMILY SSF53474 29 265 1.66E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_03650 2333467c168cb053837d72680dff510d 284 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 93 260 1.1E-26 T 11-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 300 34.197 T 11-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 196 7.3E-55 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 299 1.4E-27 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 Pfam PF01634 ATP phosphoribosyltransferase 54 215 7.4E-46 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 Gene3D G3DSA:3.30.70.120 227 299 2.9E-32 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 Gene3D G3DSA:3.40.190.10 102 191 3.2E-69 T 11-10-2018 AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 Pfam PF08029 HisG, C-terminal domain 224 297 3.0E-23 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 SUPERFAMILY SSF54913 227 299 2.89E-21 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 SUPERFAMILY SSF53850 6 224 7.76E-66 T 11-10-2018 AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AVL55_13010 f8eb6c27930398912c7ad7cfa0e776a5 300 Gene3D G3DSA:3.40.190.10 7 221 3.2E-69 T 11-10-2018 AVL55_09875 b1ec0090dcfee218b898734b21e9a42c 297 Pfam PF03466 LysR substrate binding domain 90 294 3.5E-35 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_09875 b1ec0090dcfee218b898734b21e9a42c 297 Gene3D G3DSA:1.10.10.10 4 88 1.3E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_09875 b1ec0090dcfee218b898734b21e9a42c 297 SUPERFAMILY SSF53850 91 294 9.95E-39 T 11-10-2018 AVL55_09875 b1ec0090dcfee218b898734b21e9a42c 297 Gene3D G3DSA:3.40.190.290 93 294 2.9E-53 T 11-10-2018 AVL55_09875 b1ec0090dcfee218b898734b21e9a42c 297 SUPERFAMILY SSF46785 4 113 4.17E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_09875 b1ec0090dcfee218b898734b21e9a42c 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.3E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_02630 62f472b95660d48064da862fc378a597 96 Pfam PF04977 Septum formation initiator 14 91 1.3E-24 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AVL55_02630 62f472b95660d48064da862fc378a597 96 Hamap MF_00599 Cell division protein FtsB [ftsB]. 5 93 33.836 T 11-10-2018 IPR023081 Cell division protein FtsB AVL55_15380 79da85697ef88548b4e1db837ec28d6c 242 SUPERFAMILY SSF75217 75 242 4.32E-53 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AVL55_15380 79da85697ef88548b4e1db837ec28d6c 242 PIRSF PIRSF015601 2 241 3.3E-61 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AVL55_15380 79da85697ef88548b4e1db837ec28d6c 242 Gene3D G3DSA:2.40.240.20 1 68 3.3E-22 T 11-10-2018 AVL55_15380 79da85697ef88548b4e1db837ec28d6c 242 SUPERFAMILY SSF88697 2 68 1.47E-15 T 11-10-2018 IPR015947 PUA-like superfamily AVL55_15380 79da85697ef88548b4e1db837ec28d6c 242 Gene3D G3DSA:3.40.1280.10 74 242 1.3E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AVL55_15380 79da85697ef88548b4e1db837ec28d6c 242 Pfam PF04452 RNA methyltransferase 19 237 1.4E-74 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AVL55_15380 79da85697ef88548b4e1db837ec28d6c 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 241 4.0E-71 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AVL55_04880 4b50cfc02f8b6073e0449c9ac4e73269 226 PRINTS PR01008 Flagellar L-ring protein signature 165 181 6.1E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AVL55_04880 4b50cfc02f8b6073e0449c9ac4e73269 226 PRINTS PR01008 Flagellar L-ring protein signature 139 154 6.1E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AVL55_04880 4b50cfc02f8b6073e0449c9ac4e73269 226 PRINTS PR01008 Flagellar L-ring protein signature 186 200 6.1E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AVL55_04880 4b50cfc02f8b6073e0449c9ac4e73269 226 PRINTS PR01008 Flagellar L-ring protein signature 66 78 6.1E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AVL55_04880 4b50cfc02f8b6073e0449c9ac4e73269 226 PRINTS PR01008 Flagellar L-ring protein signature 202 216 6.1E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AVL55_04880 4b50cfc02f8b6073e0449c9ac4e73269 226 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 223 27.242 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AVL55_04880 4b50cfc02f8b6073e0449c9ac4e73269 226 Pfam PF02107 Flagellar L-ring protein 45 225 5.8E-63 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AVL55_18950 42bb697c0881ba7da72615ac412acae8 375 SMART SM00530 9 64 1.5E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_18950 42bb697c0881ba7da72615ac412acae8 375 Pfam PF01381 Helix-turn-helix 13 64 1.4E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_18950 42bb697c0881ba7da72615ac412acae8 375 Gene3D G3DSA:1.10.260.40 8 68 3.8E-12 T 11-10-2018 AVL55_18950 42bb697c0881ba7da72615ac412acae8 375 SUPERFAMILY SSF47413 13 72 1.18E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_10455 2347ed6a55b17a8b3a901cc3369d4717 694 Gene3D G3DSA:3.40.50.300 285 620 1.9E-28 T 11-10-2018 AVL55_10455 2347ed6a55b17a8b3a901cc3369d4717 694 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 267 1.6E-27 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AVL55_10455 2347ed6a55b17a8b3a901cc3369d4717 694 Gene3D G3DSA:3.40.50.300 6 266 7.4E-42 T 11-10-2018 AVL55_10455 2347ed6a55b17a8b3a901cc3369d4717 694 SUPERFAMILY SSF52540 2 619 6.54E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_10455 2347ed6a55b17a8b3a901cc3369d4717 694 Gene3D G3DSA:1.10.486.10 394 543 1.9E-28 T 11-10-2018 AVL55_10455 2347ed6a55b17a8b3a901cc3369d4717 694 Pfam PF13361 UvrD-like helicase C-terminal domain 530 614 3.2E-12 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AVL55_10455 2347ed6a55b17a8b3a901cc3369d4717 694 Gene3D G3DSA:1.10.10.160 104 191 7.4E-42 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AVL55_05160 1c44981319615373366ab81dd05cf13d 135 SUPERFAMILY SSF101801 53 133 2.49E-24 T 11-10-2018 IPR036429 SpoA-like superfamily AVL55_05160 1c44981319615373366ab81dd05cf13d 135 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 126 4.2E-33 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AVL55_05160 1c44981319615373366ab81dd05cf13d 135 Gene3D G3DSA:2.30.330.10 41 135 1.4E-33 T 11-10-2018 IPR036429 SpoA-like superfamily AVL55_05160 1c44981319615373366ab81dd05cf13d 135 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 55 125 7.1E-25 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AVL55_05160 1c44981319615373366ab81dd05cf13d 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 101 116 1.9E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AVL55_05160 1c44981319615373366ab81dd05cf13d 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 88 101 1.9E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AVL55_05160 1c44981319615373366ab81dd05cf13d 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 72 88 1.9E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AVL55_05160 1c44981319615373366ab81dd05cf13d 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 55 71 1.9E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AVL55_13975 0de6067850978e14e476c70f4b23ab9e 731 Pfam PF01274 Malate synthase 18 702 1.2E-158 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AVL55_13975 0de6067850978e14e476c70f4b23ab9e 731 Gene3D G3DSA:2.170.170.11 133 262 2.4E-258 T 11-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AVL55_13975 0de6067850978e14e476c70f4b23ab9e 731 Gene3D G3DSA:3.20.20.360 10 585 2.4E-258 T 11-10-2018 AVL55_13975 0de6067850978e14e476c70f4b23ab9e 731 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 727 0.0 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AVL55_13975 0de6067850978e14e476c70f4b23ab9e 731 Gene3D G3DSA:1.20.1220.12 588 731 1.1E-69 T 11-10-2018 AVL55_13975 0de6067850978e14e476c70f4b23ab9e 731 SUPERFAMILY SSF51645 3 727 6.67E-282 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AVL55_13975 0de6067850978e14e476c70f4b23ab9e 731 Hamap MF_00641 Malate synthase G [glcB]. 1 731 363.481 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AVL55_16890 b5999ff50bad4c69702cc4c195a7e03b 178 SUPERFAMILY SSF52218 8 173 2.26E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_16890 b5999ff50bad4c69702cc4c195a7e03b 178 Pfam PF00258 Flavodoxin 10 169 3.8E-25 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AVL55_16890 b5999ff50bad4c69702cc4c195a7e03b 178 ProSitePatterns PS00201 Flavodoxin signature. 10 26 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AVL55_16890 b5999ff50bad4c69702cc4c195a7e03b 178 TIGRFAM TIGR01752 flav_long: flavodoxin 8 177 3.2E-63 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AVL55_16890 b5999ff50bad4c69702cc4c195a7e03b 178 Gene3D G3DSA:3.40.50.360 6 178 1.2E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_16890 b5999ff50bad4c69702cc4c195a7e03b 178 PIRSF PIRSF038996 5 178 1.9E-57 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AVL55_09230 9693b1e911a7a1520742920be9878e1e 221 Pfam PF01467 Cytidylyltransferase-like 4 179 5.5E-27 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AVL55_09230 9693b1e911a7a1520742920be9878e1e 221 Gene3D G3DSA:3.40.50.620 2 220 1.8E-56 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_09230 9693b1e911a7a1520742920be9878e1e 221 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 4 219 1.2E-37 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AVL55_09230 9693b1e911a7a1520742920be9878e1e 221 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 64 4.8E-7 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AVL55_09230 9693b1e911a7a1520742920be9878e1e 221 SUPERFAMILY SSF52374 3 220 2.61E-43 T 11-10-2018 AVL55_09230 9693b1e911a7a1520742920be9878e1e 221 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 220 24.649 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AVL55_05760 e69934254ca931cb8faf71be6d74caa9 183 SUPERFAMILY SSF46785 115 168 3.53E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 1.0E-272 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 SUPERFAMILY SSF82866 316 516 2.75E-41 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 Gene3D G3DSA:3.30.2090.10 732 820 2.8E-283 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 Gene3D G3DSA:1.20.1640.10 524 1035 2.8E-283 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 2.3E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 PRINTS PR00702 Acriflavin resistance protein family signature 348 371 2.3E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.3E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 2.3E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 2.3E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 SUPERFAMILY SSF82693 144 341 2.49E-12 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 Gene3D G3DSA:1.20.1640.10 13 523 2.8E-283 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 Gene3D G3DSA:3.30.70.1430 42 828 2.8E-283 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 SUPERFAMILY SSF82866 817 1041 1.96E-55 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 SUPERFAMILY SSF82693 43 129 1.94E-21 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 Gene3D G3DSA:3.30.70.1440 678 878 2.8E-283 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 SUPERFAMILY SSF82714 734 818 2.09E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 Gene3D G3DSA:3.30.70.1430 577 677 2.8E-283 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 SUPERFAMILY SSF82714 187 274 1.03E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 SUPERFAMILY SSF82693 577 676 6.02E-8 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1042 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 Gene3D G3DSA:3.30.70.1320 136 344 2.8E-283 T 11-10-2018 AVL55_14695 5948f3fa18d8cdd95e76611c108b33eb 1045 Gene3D G3DSA:3.30.2090.10 183 277 2.8E-283 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 SUPERFAMILY SSF63446 1273 1327 1.7E-7 T 11-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1308 1320 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1278 1290 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 SUPERFAMILY SSF56219 965 1269 1.57E-35 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 Gene3D G3DSA:1.10.1330.10 1274 1329 4.6E-5 T 11-10-2018 AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 Gene3D G3DSA:3.60.10.10 964 1268 2.0E-38 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 Pfam PF04231 Endonuclease I 271 486 2.0E-40 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 SUPERFAMILY SSF54060 266 486 7.53E-50 T 11-10-2018 AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 Pfam PF00932 Lamin Tail Domain 524 634 2.0E-13 T 11-10-2018 IPR001322 Lamin tail domain AVL55_12230 df6cd6b00ba59f491746c69be20ac4f3 1334 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 967 1261 1.3E-11 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AVL55_16050 9271b80e688455dc6d8391917b593a1c 427 Gene3D G3DSA:3.40.190.10 63 362 3.5E-21 T 11-10-2018 AVL55_16050 9271b80e688455dc6d8391917b593a1c 427 SUPERFAMILY SSF53850 40 425 3.32E-47 T 11-10-2018 AVL55_16050 9271b80e688455dc6d8391917b593a1c 427 Pfam PF13416 Bacterial extracellular solute-binding protein 65 336 8.0E-12 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AVL55_16050 9271b80e688455dc6d8391917b593a1c 427 Gene3D G3DSA:3.40.190.10 171 308 3.5E-21 T 11-10-2018 AVL55_19165 2dd38e3ec6427084ff1358afc1aa954a 628 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 23 613 34.255 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AVL55_19165 2dd38e3ec6427084ff1358afc1aa954a 628 Gene3D G3DSA:3.40.30.10 492 614 3.7E-28 T 11-10-2018 AVL55_19165 2dd38e3ec6427084ff1358afc1aa954a 628 Pfam PF13899 Thioredoxin-like 504 585 1.3E-11 T 11-10-2018 AVL55_19165 2dd38e3ec6427084ff1358afc1aa954a 628 SUPERFAMILY SSF52833 494 611 9.16E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_19165 2dd38e3ec6427084ff1358afc1aa954a 628 SUPERFAMILY SSF74863 51 165 1.7E-38 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AVL55_19165 2dd38e3ec6427084ff1358afc1aa954a 628 Gene3D G3DSA:2.60.40.1250 47 179 1.3E-40 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AVL55_19165 2dd38e3ec6427084ff1358afc1aa954a 628 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 216 416 2.1E-17 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AVL55_19165 2dd38e3ec6427084ff1358afc1aa954a 628 Pfam PF11412 Disulphide bond corrector protein DsbC 53 162 8.3E-30 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AVL55_19165 2dd38e3ec6427084ff1358afc1aa954a 628 ProSitePatterns PS00194 Thioredoxin family active site. 521 539 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AVL55_04865 c620cebd70b8112e33c8ce36540222f5 455 SUPERFAMILY SSF117143 80 415 8.76E-70 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AVL55_04865 c620cebd70b8112e33c8ce36540222f5 455 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AVL55_04865 c620cebd70b8112e33c8ce36540222f5 455 Gene3D G3DSA:2.60.98.20 156 336 4.3E-20 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily AVL55_04865 c620cebd70b8112e33c8ce36540222f5 455 Pfam PF07559 Flagellar basal body protein FlaE 182 335 3.3E-29 T 11-10-2018 IPR011491 Flagellar hook protein FlgE AVL55_04865 c620cebd70b8112e33c8ce36540222f5 455 Pfam PF00460 Flagella basal body rod protein 3 33 8.7E-11 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AVL55_04865 c620cebd70b8112e33c8ce36540222f5 455 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 377 454 9.3E-13 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AVL55_04865 c620cebd70b8112e33c8ce36540222f5 455 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 437 4.2E-96 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 Gene3D G3DSA:2.40.37.10 16 564 1.7E-222 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 SUPERFAMILY SSF50621 460 565 1.02E-7 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01180 Arginine decarboxylase signature 69 84 4.1E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01180 Arginine decarboxylase signature 149 164 4.1E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01180 Arginine decarboxylase signature 93 107 4.1E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01180 Arginine decarboxylase signature 326 343 4.1E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01180 Arginine decarboxylase signature 199 221 4.1E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01180 Arginine decarboxylase signature 489 514 4.1E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01180 Arginine decarboxylase signature 175 196 4.1E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01180 Arginine decarboxylase signature 464 485 4.1E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01180 Arginine decarboxylase signature 542 563 4.1E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 SUPERFAMILY SSF51419 70 349 2.99E-64 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 137 1.5E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 1.5E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 1.5E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 101 119 1.5E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 542 555 1.5E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 PIRSF PIRSF001336 1 639 6.3E-248 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 93 346 8.4E-44 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 TIGRFAM TIGR01273 speA: arginine decarboxylase 7 638 4.6E-217 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 Gene3D G3DSA:3.20.20.10 70 351 1.7E-222 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 280 293 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 101 119 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AVL55_19000 f0721740b26a7a3ba6f177ae39759f20 639 Gene3D G3DSA:1.20.58.930 369 460 1.7E-222 T 11-10-2018 AVL55_05310 fa8e75b28e0810d8ae5b8e29fa40925d 691 Gene3D G3DSA:1.10.1380.10 85 475 3.3E-224 T 11-10-2018 AVL55_05310 fa8e75b28e0810d8ae5b8e29fa40925d 691 Gene3D G3DSA:3.40.390.10 55 691 3.3E-224 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AVL55_05310 fa8e75b28e0810d8ae5b8e29fa40925d 691 Pfam PF01431 Peptidase family M13 488 688 7.5E-66 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_05310 fa8e75b28e0810d8ae5b8e29fa40925d 691 Pfam PF05649 Peptidase family M13 59 436 5.0E-94 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AVL55_05310 fa8e75b28e0810d8ae5b8e29fa40925d 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 480 492 2.8E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_05310 fa8e75b28e0810d8ae5b8e29fa40925d 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 498 510 2.8E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_05310 fa8e75b28e0810d8ae5b8e29fa40925d 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 590 601 2.8E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_05310 fa8e75b28e0810d8ae5b8e29fa40925d 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 519 535 2.8E-21 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_05310 fa8e75b28e0810d8ae5b8e29fa40925d 691 SUPERFAMILY SSF55486 49 691 2.05E-197 T 11-10-2018 AVL55_02790 c22e0b7f62249ae4baea0d7eb65fbe18 457 Pfam PF12801 4Fe-4S binding domain 84 127 2.3E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AVL55_02790 c22e0b7f62249ae4baea0d7eb65fbe18 457 Gene3D G3DSA:2.60.40.10 341 451 2.0E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_02790 c22e0b7f62249ae4baea0d7eb65fbe18 457 SUPERFAMILY SSF54862 95 313 4.44E-26 T 11-10-2018 AVL55_02790 c22e0b7f62249ae4baea0d7eb65fbe18 457 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 260 271 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AVL55_02790 c22e0b7f62249ae4baea0d7eb65fbe18 457 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 343 442 7.8E-20 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AVL55_02790 c22e0b7f62249ae4baea0d7eb65fbe18 457 Pfam PF13746 4Fe-4S dicluster domain 209 312 4.5E-39 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AVL55_02790 c22e0b7f62249ae4baea0d7eb65fbe18 457 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 31 439 1.5E-140 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AVL55_09975 e7fd888541e5358667ae1a7ae875875e 234 Gene3D G3DSA:1.10.287.130 17 76 2.2E-19 T 11-10-2018 AVL55_09975 e7fd888541e5358667ae1a7ae875875e 234 SUPERFAMILY SSF47384 14 77 4.71E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_09975 e7fd888541e5358667ae1a7ae875875e 234 Gene3D G3DSA:3.30.565.10 77 234 2.2E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_09975 e7fd888541e5358667ae1a7ae875875e 234 SMART SM00387 124 234 0.0018 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_09975 e7fd888541e5358667ae1a7ae875875e 234 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 125 233 2.5E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_09975 e7fd888541e5358667ae1a7ae875875e 234 PRINTS PR00344 Bacterial sensor protein C-terminal signature 160 174 3.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_09975 e7fd888541e5358667ae1a7ae875875e 234 PRINTS PR00344 Bacterial sensor protein C-terminal signature 191 209 3.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_09975 e7fd888541e5358667ae1a7ae875875e 234 PRINTS PR00344 Bacterial sensor protein C-terminal signature 221 234 3.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_09975 e7fd888541e5358667ae1a7ae875875e 234 SUPERFAMILY SSF55874 70 234 7.15E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_06585 8dda732134e194ab776966f570a4abc2 713 Gene3D G3DSA:3.40.50.720 309 503 9.1E-63 T 11-10-2018 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 624 708 1.1E-5 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 501 594 2.8E-24 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 SUPERFAMILY SSF52096 10 308 3.06E-68 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_06585 8dda732134e194ab776966f570a4abc2 713 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 319 498 1.6E-56 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 Gene3D G3DSA:1.10.1040.50 504 707 5.3E-72 T 11-10-2018 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 Gene3D G3DSA:3.90.226.10 8 308 7.8E-99 T 11-10-2018 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 210 7.1E-44 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 SUPERFAMILY SSF48179 619 712 4.85E-26 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 SUPERFAMILY SSF51735 316 498 3.43E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_06585 8dda732134e194ab776966f570a4abc2 713 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 SUPERFAMILY SSF48179 501 600 1.28E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 11 712 0.0 T 11-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_06585 8dda732134e194ab776966f570a4abc2 713 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 498 523 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_19440 a754044aa689c4808e5421aba029dc8e 184 Gene3D G3DSA:2.40.160.20 27 184 1.5E-8 T 11-10-2018 AVL55_19440 a754044aa689c4808e5421aba029dc8e 184 Pfam PF13505 Outer membrane protein beta-barrel domain 8 171 1.1E-14 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AVL55_19440 a754044aa689c4808e5421aba029dc8e 184 SUPERFAMILY SSF56925 29 146 7.06E-10 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AVL55_05835 a598f9b3dc3866a78a78e69f1d7af5b2 93 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 91 1.5E-15 T 11-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AVL55_05835 a598f9b3dc3866a78a78e69f1d7af5b2 93 Pfam PF07178 TraL protein 5 91 4.1E-29 T 11-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AVL55_12695 914c1c0dafa25462b09377d90d25cad1 149 SUPERFAMILY SSF51261 6 119 1.62E-25 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_12695 914c1c0dafa25462b09377d90d25cad1 149 Pfam PF01551 Peptidase family M23 32 119 6.5E-21 T 11-10-2018 IPR016047 Peptidase M23 AVL55_12695 914c1c0dafa25462b09377d90d25cad1 149 Gene3D G3DSA:2.70.70.10 3 148 9.7E-26 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_18640 01aa1906eca672108b2a52355e01c893 362 Gene3D G3DSA:2.40.50.100 62 201 1.7E-44 T 11-10-2018 AVL55_18640 01aa1906eca672108b2a52355e01c893 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 350 8.1E-52 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_18640 01aa1906eca672108b2a52355e01c893 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 260 4.9E-9 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_18640 01aa1906eca672108b2a52355e01c893 362 Gene3D G3DSA:1.10.287.470 95 169 1.7E-44 T 11-10-2018 AVL55_18640 01aa1906eca672108b2a52355e01c893 362 SUPERFAMILY SSF111369 53 234 1.7E-13 T 11-10-2018 AVL55_18640 01aa1906eca672108b2a52355e01c893 362 Gene3D G3DSA:2.40.30.170 50 277 1.7E-44 T 11-10-2018 AVL55_18640 01aa1906eca672108b2a52355e01c893 362 Gene3D G3DSA:2.40.420.20 38 336 1.7E-44 T 11-10-2018 AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 SUPERFAMILY SSF51735 1 145 7.81E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.6E-45 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 Gene3D G3DSA:3.90.110.10 147 312 1.2E-52 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 PIRSF PIRSF000102 1 300 2.7E-63 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.2E-46 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 SUPERFAMILY SSF56327 146 311 8.2E-42 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 54.373 T 11-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 2.9E-131 T 11-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 11-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AVL55_17090 77c52f172a7aec158ff2a8a51618c6e4 312 Gene3D G3DSA:3.40.50.720 1 146 1.2E-63 T 11-10-2018 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 Gene3D G3DSA:3.40.120.10 324 447 1.1E-30 T 11-10-2018 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 496 543 2.7E-7 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 Gene3D G3DSA:3.30.310.50 449 550 2.6E-33 T 11-10-2018 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 SUPERFAMILY SSF53738 25 240 1.79E-45 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 SUPERFAMILY SSF53738 310 453 7.06E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 184 2.6E-34 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 SUPERFAMILY SSF55957 439 549 1.18E-18 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 SUPERFAMILY SSF53738 214 320 8.12E-9 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 Gene3D G3DSA:3.40.120.10 226 323 9.2E-43 T 11-10-2018 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 326 446 7.8E-27 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 550 6.7E-266 T 11-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 215 319 1.1E-16 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 Gene3D G3DSA:3.40.120.10 12 223 1.3E-71 T 11-10-2018 AVL55_07735 522e59c3b784f7af803c9755559d3378 550 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 145 154 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_20015 ead7d4a203eefbd9d09110c3354f2f63 156 SUPERFAMILY SSF81573 63 121 1.7E-14 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AVL55_20015 ead7d4a203eefbd9d09110c3354f2f63 156 Gene3D G3DSA:1.20.5.620 62 122 2.7E-20 T 11-10-2018 AVL55_20015 ead7d4a203eefbd9d09110c3354f2f63 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 7.1E-53 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AVL55_20015 ead7d4a203eefbd9d09110c3354f2f63 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.1E-37 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AVL55_20015 ead7d4a203eefbd9d09110c3354f2f63 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.189 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 194 209 2.6E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 239 254 2.6E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 340 355 2.6E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 323 2.6E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 359 371 2.6E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 SUPERFAMILY SSF63737 62 256 3.14E-44 T 11-10-2018 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 SMART SM01263 508 647 6.9E-50 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 Pfam PF01433 Peptidase family M1 domain 265 475 5.4E-52 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 SUPERFAMILY SSF55486 263 500 2.08E-67 T 11-10-2018 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 536 641 3.1E-25 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 Gene3D G3DSA:2.60.40.1730 73 255 1.4E-62 T 11-10-2018 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 Gene3D G3DSA:1.10.390.10 353 507 2.0E-50 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 SUPERFAMILY SSF48371 508 641 1.21E-38 T 11-10-2018 IPR016024 Armadillo-type fold AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 Gene3D G3DSA:1.10.1740.60 256 352 3.5E-42 T 11-10-2018 AVL55_04065 98a126dc7052119f285a9a70ef71372d 648 Gene3D G3DSA:1.25.40.320 508 646 1.8E-49 T 11-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Pfam PF01627 Hpt domain 949 1024 4.2E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Pfam PF13426 PAS domain 281 376 1.1E-9 T 11-10-2018 IPR000014 PAS domain AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Gene3D G3DSA:3.30.450.20 267 389 1.3E-25 T 11-10-2018 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Pfam PF08447 PAS fold 423 507 1.7E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Gene3D G3DSA:3.40.50.2300 774 900 2.5E-37 T 11-10-2018 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Pfam PF00512 His Kinase A (phospho-acceptor) domain 535 599 3.8E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 647 756 1.7E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SMART SM00086 472 514 2.3E-6 T 11-10-2018 IPR001610 PAC motif AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SMART SM00086 346 386 72.0 T 11-10-2018 IPR001610 PAC motif AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Pfam PF03707 Bacterial signalling protein N terminal repeat 129 177 3.0E-10 T 11-10-2018 IPR005330 MHYT domain AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Pfam PF03707 Bacterial signalling protein N terminal repeat 66 122 8.5E-17 T 11-10-2018 IPR005330 MHYT domain AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Pfam PF03707 Bacterial signalling protein N terminal repeat 199 249 3.0E-8 T 11-10-2018 IPR005330 MHYT domain AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Gene3D G3DSA:3.30.450.20 396 511 3.9E-21 T 11-10-2018 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SMART SM00387 646 757 2.8E-39 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SUPERFAMILY SSF52172 778 904 8.68E-34 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SMART SM00091 398 470 0.11 T 11-10-2018 IPR000014 PAS domain AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SMART SM00091 270 336 3.5E-9 T 11-10-2018 IPR000014 PAS domain AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SUPERFAMILY SSF55874 588 758 3.41E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Pfam PF00072 Response regulator receiver domain 781 895 1.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SUPERFAMILY SSF47384 518 600 1.22E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 521 6.1E-10 T 11-10-2018 IPR000014 PAS domain AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 393 1.3E-21 T 11-10-2018 IPR000014 PAS domain AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SUPERFAMILY SSF47226 878 1022 8.64E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Gene3D G3DSA:1.10.287.130 512 597 7.1E-26 T 11-10-2018 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Gene3D G3DSA:1.20.120.160 921 1036 1.2E-8 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 710 5.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 754 5.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 717 735 5.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 696 5.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SMART SM00448 779 895 1.0E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 Gene3D G3DSA:3.30.565.10 598 761 2.0E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SMART SM00388 534 599 8.0E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SUPERFAMILY SSF55785 281 395 2.51E-21 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_08840 8146e5b26c72ec2ced83909be4ffec1d 1111 SUPERFAMILY SSF55785 385 512 9.63E-18 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_15520 c580327a1f3d125dcd184b478753c4f7 427 Pfam PF14821 Threonine synthase N terminus 8 78 4.4E-11 T 11-10-2018 IPR029144 Threonine synthase, N-terminal AVL55_15520 c580327a1f3d125dcd184b478753c4f7 427 Gene3D G3DSA:3.40.50.1100 83 392 5.2E-134 T 11-10-2018 AVL55_15520 c580327a1f3d125dcd184b478753c4f7 427 TIGRFAM TIGR00260 thrC: threonine synthase 55 391 1.5E-110 T 11-10-2018 IPR004450 Threonine synthase-like AVL55_15520 c580327a1f3d125dcd184b478753c4f7 427 Gene3D G3DSA:3.40.50.1100 101 399 5.2E-134 T 11-10-2018 AVL55_15520 c580327a1f3d125dcd184b478753c4f7 427 Gene3D G3DSA:3.90.1380.10 1 79 2.4E-24 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily AVL55_15520 c580327a1f3d125dcd184b478753c4f7 427 SUPERFAMILY SSF53686 3 426 2.62E-124 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AVL55_15520 c580327a1f3d125dcd184b478753c4f7 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AVL55_15520 c580327a1f3d125dcd184b478753c4f7 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 367 2.7E-26 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 8 244 2.7E-44 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 Gene3D G3DSA:3.40.50.620 6 282 5.5E-101 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 Gene3D G3DSA:3.40.50.620 80 222 5.5E-101 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 5 265 3.8E-100 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 198 2.6E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 2.6E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 2.6E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 174 184 2.6E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 2.6E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_17980 4243db9e55bfa0bfbdf3d113be737f95 307 SUPERFAMILY SSF52374 5 290 4.5E-76 T 11-10-2018 AVL55_11340 63e43cc8e8672d826be305b2e513a026 290 SUPERFAMILY SSF52540 37 256 1.88E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11340 63e43cc8e8672d826be305b2e513a026 290 Gene3D G3DSA:3.40.50.300 16 289 2.6E-74 T 11-10-2018 AVL55_11340 63e43cc8e8672d826be305b2e513a026 290 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 43 158 6.1E-7 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AVL55_14520 2cd4b4437a7e066de7689ed25dac3a4b 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AVL55_14520 2cd4b4437a7e066de7689ed25dac3a4b 488 Gene3D G3DSA:3.40.605.10 19 477 1.2E-175 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_14520 2cd4b4437a7e066de7689ed25dac3a4b 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AVL55_14520 2cd4b4437a7e066de7689ed25dac3a4b 488 Pfam PF00171 Aldehyde dehydrogenase family 18 477 9.4E-172 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AVL55_14520 2cd4b4437a7e066de7689ed25dac3a4b 488 SUPERFAMILY SSF53720 3 484 1.57E-164 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_14520 2cd4b4437a7e066de7689ed25dac3a4b 488 Gene3D G3DSA:3.40.309.10 255 449 1.2E-175 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 SUPERFAMILY SSF47384 158 244 5.3E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 SMART SM00448 423 533 6.7E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 Gene3D G3DSA:3.30.450.40 14 159 2.1E-13 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 SMART SM00065 26 168 1.4E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 SUPERFAMILY SSF52172 422 538 1.99E-28 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 3.4E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 354 3.4E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 3.4E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 340 3.4E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 Gene3D G3DSA:3.40.50.2300 417 542 9.5E-28 T 11-10-2018 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 SUPERFAMILY SSF55781 28 169 6.28E-26 T 11-10-2018 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 Gene3D G3DSA:3.30.565.10 244 401 1.5E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 398 1.2E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 SMART SM00387 289 399 2.2E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 Pfam PF00512 His Kinase A (phospho-acceptor) domain 174 242 4.2E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 Pfam PF00072 Response regulator receiver domain 425 533 4.3E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 SMART SM00388 173 242 7.1E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 SUPERFAMILY SSF55874 231 397 1.7E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 Gene3D G3DSA:1.10.287.130 160 243 8.0E-21 T 11-10-2018 AVL55_15050 0d0f74a6ce08470e56d042fa9c5da7b3 542 Pfam PF01590 GAF domain 27 154 9.1E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_18440 757fba55c4109caddeb1be446b4d0b2f 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 81 1.9E-18 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_18440 757fba55c4109caddeb1be446b4d0b2f 202 SUPERFAMILY SSF47616 78 201 5.43E-25 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_18440 757fba55c4109caddeb1be446b4d0b2f 202 Gene3D G3DSA:1.20.1050.10 82 197 2.6E-66 T 11-10-2018 AVL55_18440 757fba55c4109caddeb1be446b4d0b2f 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 138 198 1.9E-9 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AVL55_18440 757fba55c4109caddeb1be446b4d0b2f 202 Gene3D G3DSA:3.40.30.10 8 201 2.6E-66 T 11-10-2018 AVL55_18440 757fba55c4109caddeb1be446b4d0b2f 202 SUPERFAMILY SSF52833 1 90 8.9E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 11-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 PRINTS PR00959 Mevalonate kinase family signature 160 179 2.5E-44 T 11-10-2018 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 PRINTS PR00959 Mevalonate kinase family signature 326 343 2.5E-44 T 11-10-2018 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 PRINTS PR00959 Mevalonate kinase family signature 24 48 2.5E-44 T 11-10-2018 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 PRINTS PR00959 Mevalonate kinase family signature 117 139 2.5E-44 T 11-10-2018 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 Pfam PF08544 GHMP kinases C terminal 278 359 9.7E-10 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 119 130 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 Pfam PF10509 Galactokinase galactose-binding signature 9 56 9.8E-23 T 11-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 Gene3D G3DSA:3.30.230.10 3 203 4.0E-65 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 Gene3D G3DSA:3.30.70.890 204 378 3.3E-59 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 SUPERFAMILY SSF54211 6 201 1.75E-62 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 Hamap MF_00246 Galactokinase [galK]. 24 379 41.601 T 11-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 TIGRFAM TIGR00131 gal_kin: galactokinase 6 377 6.7E-128 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 PRINTS PR00473 Galactokinase signature 110 128 1.0E-28 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 PRINTS PR00473 Galactokinase signature 26 44 1.0E-28 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 PRINTS PR00473 Galactokinase signature 261 275 1.0E-28 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 PRINTS PR00473 Galactokinase signature 90 101 1.0E-28 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 SUPERFAMILY SSF55060 203 378 1.47E-49 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 PIRSF PIRSF000530 2 380 1.1E-117 T 11-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AVL55_00950 ca2859378fa2c8a03681ac9bbba2294a 380 Pfam PF00288 GHMP kinases N terminal domain 113 180 4.7E-15 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.2E-21 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 1.2E-22 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Gene3D G3DSA:2.40.50.140 621 692 2.9E-29 T 11-10-2018 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Pfam PF00013 KH domain 555 612 4.4E-9 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Gene3D G3DSA:3.30.1370.10 549 620 1.1E-17 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 SUPERFAMILY SSF50249 609 694 1.29E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 SMART SM00322 551 616 1.4E-10 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 SUPERFAMILY SSF55666 449 548 6.45E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 SUPERFAMILY SSF54211 292 487 1.37E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 SUPERFAMILY SSF54791 554 637 2.01E-17 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 8.9E-12 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Pfam PF03725 3' exoribonuclease family, domain 2 459 528 6.2E-5 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 SUPERFAMILY SSF46915 238 319 7.06E-19 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.297 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 SMART SM00316 619 689 2.0E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 319 6.8E-20 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Gene3D G3DSA:3.30.230.70 232 548 1.1E-116 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 SUPERFAMILY SSF54211 4 143 1.97E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 SUPERFAMILY SSF55666 144 234 8.13E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 PIRSF PIRSF005499 1 703 1.6E-298 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Gene3D G3DSA:3.30.230.70 2 229 4.1E-79 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_09385 f4630c7e755510e345a5474f77b6e4f0 703 Pfam PF00575 S1 RNA binding domain 618 689 5.1E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_17265 d70a27766501e6b7577f75d219514577 395 PIRSF PIRSF500134 346 395 9.6 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AVL55_17265 d70a27766501e6b7577f75d219514577 395 PIRSF PIRSF500134 8 374 3.4E-120 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AVL55_17265 d70a27766501e6b7577f75d219514577 395 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 9 176 4.8E-31 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AVL55_17265 d70a27766501e6b7577f75d219514577 395 SMART SM00984 307 394 5.4E-13 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AVL55_17265 d70a27766501e6b7577f75d219514577 395 Gene3D G3DSA:3.40.50.720 7 200 7.8E-57 T 11-10-2018 AVL55_17265 d70a27766501e6b7577f75d219514577 395 Gene3D G3DSA:3.40.50.720 229 395 7.2E-68 T 11-10-2018 AVL55_17265 d70a27766501e6b7577f75d219514577 395 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 9 380 1.1E-100 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AVL55_17265 d70a27766501e6b7577f75d219514577 395 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 288 9.0E-28 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AVL55_17265 d70a27766501e6b7577f75d219514577 395 SUPERFAMILY SSF48179 198 294 1.14E-30 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_17265 d70a27766501e6b7577f75d219514577 395 SUPERFAMILY SSF51735 9 201 5.21E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_17265 d70a27766501e6b7577f75d219514577 395 Gene3D G3DSA:1.20.5.100 201 228 4.1E-20 T 11-10-2018 AVL55_17265 d70a27766501e6b7577f75d219514577 395 SUPERFAMILY SSF52413 290 394 1.44E-26 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AVL55_17265 d70a27766501e6b7577f75d219514577 395 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 308 374 7.5E-8 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AVL55_17265 d70a27766501e6b7577f75d219514577 395 PIRSF PIRSF000124 8 395 1.7E-134 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AVL55_03300 18734d9ee8bb53560af6565227517100 449 PIRSF PIRSF000726 3 449 6.8E-128 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_03300 18734d9ee8bb53560af6565227517100 449 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_03300 18734d9ee8bb53560af6565227517100 449 SUPERFAMILY SSF55021 376 448 1.24E-12 T 11-10-2018 AVL55_03300 18734d9ee8bb53560af6565227517100 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 5 449 3.4E-122 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_03300 18734d9ee8bb53560af6565227517100 449 SUPERFAMILY SSF53633 7 294 6.68E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_03300 18734d9ee8bb53560af6565227517100 449 SUPERFAMILY SSF55021 298 364 2.09E-12 T 11-10-2018 AVL55_03300 18734d9ee8bb53560af6565227517100 449 Gene3D G3DSA:3.30.70.260 311 383 6.6E-43 T 11-10-2018 AVL55_03300 18734d9ee8bb53560af6565227517100 449 Gene3D G3DSA:3.40.1160.10 7 291 1.2E-98 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_03300 18734d9ee8bb53560af6565227517100 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.3E-126 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_03300 18734d9ee8bb53560af6565227517100 449 Gene3D G3DSA:3.30.70.260 305 446 6.6E-43 T 11-10-2018 AVL55_03300 18734d9ee8bb53560af6565227517100 449 Pfam PF00696 Amino acid kinase family 7 279 8.1E-51 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AVL55_03300 18734d9ee8bb53560af6565227517100 449 Gene3D G3DSA:1.20.120.1320 43 136 1.2E-98 T 11-10-2018 AVL55_02745 af1f327563381ce7259ea4f313169051 728 SUPERFAMILY SSF47384 245 301 3.53E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_02745 af1f327563381ce7259ea4f313169051 728 SMART SM00388 244 307 3.9E-5 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_02745 af1f327563381ce7259ea4f313169051 728 SMART SM00448 482 596 2.1E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02745 af1f327563381ce7259ea4f313169051 728 SMART SM00448 613 724 2.0E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02745 af1f327563381ce7259ea4f313169051 728 Gene3D G3DSA:3.30.565.10 308 470 1.3E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02745 af1f327563381ce7259ea4f313169051 728 SUPERFAMILY SSF55874 306 470 7.6E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02745 af1f327563381ce7259ea4f313169051 728 Gene3D G3DSA:1.10.287.130 227 303 3.2E-10 T 11-10-2018 AVL55_02745 af1f327563381ce7259ea4f313169051 728 Pfam PF00072 Response regulator receiver domain 485 596 1.1E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02745 af1f327563381ce7259ea4f313169051 728 Pfam PF00072 Response regulator receiver domain 615 724 7.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02745 af1f327563381ce7259ea4f313169051 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 1.5E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02745 af1f327563381ce7259ea4f313169051 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 1.5E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02745 af1f327563381ce7259ea4f313169051 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 1.5E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02745 af1f327563381ce7259ea4f313169051 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 1.5E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02745 af1f327563381ce7259ea4f313169051 728 SUPERFAMILY SSF52172 482 601 4.55E-21 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_02745 af1f327563381ce7259ea4f313169051 728 SMART SM00387 353 468 2.5E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_02745 af1f327563381ce7259ea4f313169051 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 467 5.1E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_02745 af1f327563381ce7259ea4f313169051 728 Gene3D G3DSA:3.40.50.2300 475 605 3.2E-18 T 11-10-2018 AVL55_02745 af1f327563381ce7259ea4f313169051 728 Gene3D G3DSA:3.40.50.2300 606 728 1.1E-32 T 11-10-2018 AVL55_02745 af1f327563381ce7259ea4f313169051 728 SUPERFAMILY SSF52172 611 728 1.57E-34 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_02745 af1f327563381ce7259ea4f313169051 728 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 300 8.7E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_00985 4b5240a8c7c0e38bbc19792f45dcda59 366 TIGRFAM TIGR03977 rSAM_pair_HxsC: His-Xaa-Ser system radical SAM maturase HxsC 65 353 2.9E-103 T 11-10-2018 IPR024032 His-Xaa-Ser system radical SAM maturase HxsC AVL55_00985 4b5240a8c7c0e38bbc19792f45dcda59 366 Pfam PF04055 Radical SAM superfamily 93 235 1.4E-8 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_00985 4b5240a8c7c0e38bbc19792f45dcda59 366 SUPERFAMILY SSF102114 91 349 6.41E-24 T 11-10-2018 AVL55_00985 4b5240a8c7c0e38bbc19792f45dcda59 366 Gene3D G3DSA:3.20.20.70 86 364 1.2E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_00985 4b5240a8c7c0e38bbc19792f45dcda59 366 Pfam PF13353 4Fe-4S single cluster domain 92 178 1.3E-4 T 11-10-2018 AVL55_13220 facd0c12c518d5c6447d8d2736d5f483 569 Pfam PF02652 L-lactate permease 8 554 3.7E-109 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AVL55_13220 facd0c12c518d5c6447d8d2736d5f483 569 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 8 557 1.0E-104 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 625 45.17 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 SUPERFAMILY SSF52922 491 621 1.22E-27 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 Gene3D G3DSA:3.40.50.970 317 491 2.4E-65 T 11-10-2018 AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 618 6.5E-286 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 1.3E-37 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.5E-120 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 SMART SM00861 319 483 7.2E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 SUPERFAMILY SSF52518 316 503 1.09E-55 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 SUPERFAMILY SSF52518 7 381 1.23E-78 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 Gene3D G3DSA:3.40.50.920 495 624 5.9E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AVL55_13320 6fdf61d861a236131b1aaea55bb5ce93 626 Pfam PF02780 Transketolase, C-terminal domain 508 616 4.2E-23 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 Pfam PF13186 Iron-sulfur cluster-binding domain 252 317 9.4E-10 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 SUPERFAMILY SSF102114 18 326 1.96E-77 T 11-10-2018 AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 PIRSF PIRSF037420 6 365 2.0E-121 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 Gene3D G3DSA:3.20.20.70 21 303 2.7E-51 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 383 166.093 T 11-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 16 371 3.6E-162 T 11-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 Pfam PF13353 4Fe-4S single cluster domain 29 105 1.0E-6 T 11-10-2018 AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 Pfam PF04055 Radical SAM superfamily 27 180 1.2E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 252 344 1.3E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AVL55_14220 ee2b7dcb2857221742280027886d0bb7 386 SMART SM00729 21 222 2.3E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AVL55_19030 8dc1970111a596785b5f929e6d0bb012 522 Gene3D G3DSA:3.50.50.60 3 518 1.1E-184 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_19030 8dc1970111a596785b5f929e6d0bb012 522 SUPERFAMILY SSF51905 5 443 5.76E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_19030 8dc1970111a596785b5f929e6d0bb012 522 PIRSF PIRSF011396 2 519 2.8E-167 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AVL55_19030 8dc1970111a596785b5f929e6d0bb012 522 Pfam PF04820 Tryptophan halogenase 10 472 8.5E-121 T 11-10-2018 IPR006905 Flavin-dependent halogenase AVL55_19485 932b32e6f49065d711e5f9f53e2e31b9 261 SUPERFAMILY SSF54534 45 251 2.95E-59 T 11-10-2018 AVL55_19485 932b32e6f49065d711e5f9f53e2e31b9 261 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 249 3.7E-26 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AVL55_19485 932b32e6f49065d711e5f9f53e2e31b9 261 Gene3D G3DSA:1.10.287.460 29 148 1.5E-26 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AVL55_19485 932b32e6f49065d711e5f9f53e2e31b9 261 Gene3D G3DSA:3.10.50.40 150 254 4.0E-42 T 11-10-2018 AVL55_19485 932b32e6f49065d711e5f9f53e2e31b9 261 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 38 155 1.7E-29 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AVL55_00835 da96efba98d72e9ff12ae2335f68ea80 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 9.4E-99 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AVL55_00835 da96efba98d72e9ff12ae2335f68ea80 276 Pfam PF01678 Diaminopimelate epimerase 5 125 9.1E-36 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AVL55_00835 da96efba98d72e9ff12ae2335f68ea80 276 Pfam PF01678 Diaminopimelate epimerase 155 269 2.8E-30 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AVL55_00835 da96efba98d72e9ff12ae2335f68ea80 276 SUPERFAMILY SSF54506 3 276 1.23E-54 T 11-10-2018 AVL55_00835 da96efba98d72e9ff12ae2335f68ea80 276 Gene3D G3DSA:3.10.310.10 5 272 4.4E-104 T 11-10-2018 AVL55_00835 da96efba98d72e9ff12ae2335f68ea80 276 Gene3D G3DSA:3.10.310.10 117 263 4.4E-104 T 11-10-2018 AVL55_00835 da96efba98d72e9ff12ae2335f68ea80 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.981 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AVL55_00835 da96efba98d72e9ff12ae2335f68ea80 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AVL55_17105 65155f564f05be5f062cdaa2fe9de373 1006 Gene3D G3DSA:2.170.130.10 113 240 2.3E-6 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_17105 65155f564f05be5f062cdaa2fe9de373 1006 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 109 3.8E-14 T 11-10-2018 AVL55_17105 65155f564f05be5f062cdaa2fe9de373 1006 SUPERFAMILY SSF49464 33 127 2.28E-8 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AVL55_17105 65155f564f05be5f062cdaa2fe9de373 1006 Gene3D G3DSA:2.60.40.1120 33 112 6.3E-5 T 11-10-2018 AVL55_17105 65155f564f05be5f062cdaa2fe9de373 1006 Gene3D G3DSA:2.40.170.20 283 646 8.9E-18 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_17105 65155f564f05be5f062cdaa2fe9de373 1006 SUPERFAMILY SSF56935 114 972 2.72E-59 T 11-10-2018 AVL55_17105 65155f564f05be5f062cdaa2fe9de373 1006 Pfam PF00593 TonB dependent receptor 420 989 1.3E-5 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_14915 c49153b0e9cf74e6c2722bc65a14f7a3 102 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 2.4E-43 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14915 c49153b0e9cf74e6c2722bc65a14f7a3 102 SUPERFAMILY SSF51278 1 101 7.19E-45 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14915 c49153b0e9cf74e6c2722bc65a14f7a3 102 Gene3D G3DSA:2.10.150.10 1 102 6.2E-45 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14915 c49153b0e9cf74e6c2722bc65a14f7a3 102 Pfam PF00699 Urease beta subunit 3 99 1.8E-43 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14915 c49153b0e9cf74e6c2722bc65a14f7a3 102 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 30.258 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_06300 ec1ec191aed077db6d3730414f1e5980 311 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 306 6.6E-88 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AVL55_06300 ec1ec191aed077db6d3730414f1e5980 311 Gene3D G3DSA:3.40.50.150 114 281 2.4E-46 T 11-10-2018 AVL55_06300 ec1ec191aed077db6d3730414f1e5980 311 PIRSF PIRSF037167 1 311 7.0E-134 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AVL55_06300 ec1ec191aed077db6d3730414f1e5980 311 Gene3D G3DSA:1.10.8.10 16 111 1.0E-7 T 11-10-2018 AVL55_06300 ec1ec191aed077db6d3730414f1e5980 311 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 209 215 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AVL55_06300 ec1ec191aed077db6d3730414f1e5980 311 SUPERFAMILY SSF53335 26 270 1.25E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_06300 ec1ec191aed077db6d3730414f1e5980 311 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 14 300 2.2E-127 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AVL55_06300 ec1ec191aed077db6d3730414f1e5980 311 Pfam PF05175 Methyltransferase small domain 138 220 2.0E-15 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AVL55_06300 ec1ec191aed077db6d3730414f1e5980 311 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 7 305 49.875 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AVL55_09005 eac4bb5f79a91e0555fd10efc39a0c9b 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.1E-53 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AVL55_09005 eac4bb5f79a91e0555fd10efc39a0c9b 159 Pfam PF01668 SmpB protein 14 157 2.5E-58 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AVL55_09005 eac4bb5f79a91e0555fd10efc39a0c9b 159 Gene3D G3DSA:2.40.280.10 6 134 1.2E-45 T 11-10-2018 IPR023620 Small protein B AVL55_09005 eac4bb5f79a91e0555fd10efc39a0c9b 159 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site AVL55_09005 eac4bb5f79a91e0555fd10efc39a0c9b 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 3.0E-50 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AVL55_09005 eac4bb5f79a91e0555fd10efc39a0c9b 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 70.289 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AVL55_09005 eac4bb5f79a91e0555fd10efc39a0c9b 159 SUPERFAMILY SSF74982 8 138 2.22E-48 T 11-10-2018 IPR023620 Small protein B AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 SUPERFAMILY SSF55174 5 95 1.27E-13 T 11-10-2018 AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 SUPERFAMILY SSF55120 66 239 1.05E-43 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 235 3.7E-55 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 SMART SM00363 3 60 1.5E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 Pfam PF00849 RNA pseudouridylate synthase 66 202 6.4E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 Gene3D G3DSA:3.10.290.10 1 58 2.7E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 Gene3D G3DSA:3.30.70.580 67 232 2.2E-54 T 11-10-2018 AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 Pfam PF01479 S4 domain 4 47 6.8E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_07310 6f1b850da070b066f8406a7d7702003e 298 Gene3D G3DSA:3.30.70.1560 128 224 2.2E-54 T 11-10-2018 AVL55_08515 bff1371ffb6a04654fcbaeb27a26573e 325 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 324 2.0E-111 T 11-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AVL55_08515 bff1371ffb6a04654fcbaeb27a26573e 325 SUPERFAMILY SSF50129 1 139 3.93E-32 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_08515 bff1371ffb6a04654fcbaeb27a26573e 325 Gene3D G3DSA:3.40.50.720 120 262 2.8E-97 T 11-10-2018 AVL55_08515 bff1371ffb6a04654fcbaeb27a26573e 325 SUPERFAMILY SSF51735 111 285 1.02E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_08515 bff1371ffb6a04654fcbaeb27a26573e 325 Gene3D G3DSA:3.90.180.10 15 323 2.8E-97 T 11-10-2018 AVL55_08515 bff1371ffb6a04654fcbaeb27a26573e 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 86 6.2E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AVL55_08515 bff1371ffb6a04654fcbaeb27a26573e 325 SMART SM00829 11 323 2.1E-30 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_08515 bff1371ffb6a04654fcbaeb27a26573e 325 Pfam PF00107 Zinc-binding dehydrogenase 151 273 3.8E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_13765 40bb6167b06bd99d27321b6fe17db87b 427 Gene3D G3DSA:3.40.50.800 328 424 1.4E-23 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AVL55_13765 40bb6167b06bd99d27321b6fe17db87b 427 Gene3D G3DSA:3.30.930.10 2 322 1.2E-117 T 11-10-2018 AVL55_13765 40bb6167b06bd99d27321b6fe17db87b 427 SUPERFAMILY SSF52954 330 424 1.18E-22 T 11-10-2018 AVL55_13765 40bb6167b06bd99d27321b6fe17db87b 427 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 422 33.375 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AVL55_13765 40bb6167b06bd99d27321b6fe17db87b 427 SUPERFAMILY SSF55681 5 318 4.58E-106 T 11-10-2018 AVL55_13765 40bb6167b06bd99d27321b6fe17db87b 427 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.3E-48 T 11-10-2018 AVL55_13765 40bb6167b06bd99d27321b6fe17db87b 427 Pfam PF03129 Anticodon binding domain 330 422 6.5E-11 T 11-10-2018 IPR004154 Anticodon-binding AVL55_13765 40bb6167b06bd99d27321b6fe17db87b 427 PIRSF PIRSF001549 2 424 3.4E-123 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AVL55_13765 40bb6167b06bd99d27321b6fe17db87b 427 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 408 1.2E-156 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AVL55_11600 80ea2a7aabc53988347b53e389a720da 199 SUPERFAMILY SSF109604 5 186 2.28E-48 T 11-10-2018 AVL55_11600 80ea2a7aabc53988347b53e389a720da 199 SMART SM00471 27 152 3.2E-8 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_11600 80ea2a7aabc53988347b53e389a720da 199 Gene3D G3DSA:1.10.3210.10 2 199 1.9E-84 T 11-10-2018 AVL55_11600 80ea2a7aabc53988347b53e389a720da 199 Pfam PF13023 HD domain 12 170 8.4E-20 T 11-10-2018 IPR006674 HD domain AVL55_11600 80ea2a7aabc53988347b53e389a720da 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 4 196 42.441 T 11-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AVL55_11600 80ea2a7aabc53988347b53e389a720da 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 81 177 1.0E-30 T 11-10-2018 AVL55_16160 06aceb5ed3dead3c1a9c350497ccc7c7 224 SMART SM00862 146 220 7.1E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_16160 06aceb5ed3dead3c1a9c350497ccc7c7 224 Pfam PF00072 Response regulator receiver domain 3 113 3.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16160 06aceb5ed3dead3c1a9c350497ccc7c7 224 Gene3D G3DSA:1.10.10.10 121 223 4.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16160 06aceb5ed3dead3c1a9c350497ccc7c7 224 Gene3D G3DSA:3.40.50.2300 1 120 2.3E-36 T 11-10-2018 AVL55_16160 06aceb5ed3dead3c1a9c350497ccc7c7 224 SMART SM00448 1 113 7.2E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16160 06aceb5ed3dead3c1a9c350497ccc7c7 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 5.4E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_16160 06aceb5ed3dead3c1a9c350497ccc7c7 224 SUPERFAMILY SSF52172 1 181 1.71E-38 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_09240 cec45501f445f768ab3ba8eb747efc5b 178 Pfam PF04390 Lipopolysaccharide-assembly 36 162 4.1E-12 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AVL55_09240 cec45501f445f768ab3ba8eb747efc5b 178 Gene3D G3DSA:3.30.160.150 17 171 2.0E-47 T 11-10-2018 AVL55_09240 cec45501f445f768ab3ba8eb747efc5b 178 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 167 24.878 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AVL55_11460 6a0b3e00b6aac8155f5b4705c87751dc 748 SUPERFAMILY SSF56935 27 747 9.39E-113 T 11-10-2018 AVL55_11460 6a0b3e00b6aac8155f5b4705c87751dc 748 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 160 1.6E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_11460 6a0b3e00b6aac8155f5b4705c87751dc 748 Pfam PF00593 TonB dependent receptor 259 746 3.1E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_11460 6a0b3e00b6aac8155f5b4705c87751dc 748 Gene3D G3DSA:2.40.170.20 42 748 7.3E-138 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_00545 1bed6544443786b84a1b026655d995af 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 235 251 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 SUPERFAMILY SSF53850 8 223 9.01E-87 T 11-10-2018 AVL55_00545 1bed6544443786b84a1b026655d995af 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 9 301 39.641 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 Gene3D G3DSA:3.30.160.40 225 310 1.9E-28 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 Gene3D G3DSA:3.40.190.10 107 206 1.8E-84 T 11-10-2018 AVL55_00545 1bed6544443786b84a1b026655d995af 312 SUPERFAMILY SSF54782 224 311 4.71E-27 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 Gene3D G3DSA:3.40.190.10 10 214 1.8E-84 T 11-10-2018 AVL55_00545 1bed6544443786b84a1b026655d995af 312 PRINTS PR00151 Porphobilinogen deaminase signature 49 69 1.6E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 PRINTS PR00151 Porphobilinogen deaminase signature 147 164 1.6E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 PRINTS PR00151 Porphobilinogen deaminase signature 128 145 1.6E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 PRINTS PR00151 Porphobilinogen deaminase signature 234 251 1.6E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 PRINTS PR00151 Porphobilinogen deaminase signature 80 99 1.6E-50 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 231 299 7.0E-20 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 10 301 1.2E-113 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 10 216 6.0E-79 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00545 1bed6544443786b84a1b026655d995af 312 PIRSF PIRSF001438 1 312 1.7E-122 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_19285 b61df878612f1da00d95464671a60fc0 301 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.5E-69 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AVL55_19285 b61df878612f1da00d95464671a60fc0 301 PRINTS PR00478 Phosphoribulokinase family signature 126 144 4.9E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AVL55_19285 b61df878612f1da00d95464671a60fc0 301 PRINTS PR00478 Phosphoribulokinase family signature 12 29 4.9E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AVL55_19285 b61df878612f1da00d95464671a60fc0 301 PRINTS PR00478 Phosphoribulokinase family signature 182 205 4.9E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AVL55_19285 b61df878612f1da00d95464671a60fc0 301 PRINTS PR00478 Phosphoribulokinase family signature 164 181 4.9E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AVL55_19285 b61df878612f1da00d95464671a60fc0 301 SUPERFAMILY SSF52540 4 286 1.69E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_19285 b61df878612f1da00d95464671a60fc0 301 Gene3D G3DSA:3.40.50.300 1 290 1.2E-112 T 11-10-2018 AVL55_19285 b61df878612f1da00d95464671a60fc0 301 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AVL55_02680 28672d44c5dfb3d1213ce940c7d258f5 246 SMART SM00862 145 219 1.6E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_02680 28672d44c5dfb3d1213ce940c7d258f5 246 Gene3D G3DSA:1.10.10.10 123 241 1.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_02680 28672d44c5dfb3d1213ce940c7d258f5 246 SUPERFAMILY SSF52172 1 124 1.41E-39 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_02680 28672d44c5dfb3d1213ce940c7d258f5 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 3.1E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_02680 28672d44c5dfb3d1213ce940c7d258f5 246 SUPERFAMILY SSF46894 124 219 3.4E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_02680 28672d44c5dfb3d1213ce940c7d258f5 246 Gene3D G3DSA:3.40.50.2300 1 122 8.5E-36 T 11-10-2018 AVL55_02680 28672d44c5dfb3d1213ce940c7d258f5 246 SMART SM00448 2 113 9.1E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02680 28672d44c5dfb3d1213ce940c7d258f5 246 Pfam PF00072 Response regulator receiver domain 4 113 4.3E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16445 b27d3716a621b7cf60f38f263ba58b20 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 9.2E-188 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AVL55_16445 b27d3716a621b7cf60f38f263ba58b20 499 SUPERFAMILY SSF53720 5 483 1.7E-140 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_16445 b27d3716a621b7cf60f38f263ba58b20 499 Gene3D G3DSA:3.40.309.10 249 451 3.4E-142 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AVL55_16445 b27d3716a621b7cf60f38f263ba58b20 499 Gene3D G3DSA:3.40.605.10 23 459 3.4E-142 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_16445 b27d3716a621b7cf60f38f263ba58b20 499 Pfam PF00171 Aldehyde dehydrogenase family 15 478 6.1E-133 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AVL55_18980 de9d877af3d13c5c80611b10f94b3f14 294 SUPERFAMILY SSF103481 38 138 1.28E-15 T 11-10-2018 AVL55_18980 de9d877af3d13c5c80611b10f94b3f14 294 SUPERFAMILY SSF103481 185 280 7.59E-14 T 11-10-2018 AVL55_18980 de9d877af3d13c5c80611b10f94b3f14 294 Pfam PF00892 EamA-like transporter family 149 280 2.1E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_18980 de9d877af3d13c5c80611b10f94b3f14 294 Pfam PF00892 EamA-like transporter family 6 136 1.5E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_14975 13fe2390d695e1712dfb925e8cffca0f 965 Gene3D G3DSA:3.40.640.10 98 357 3.3E-103 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_14975 13fe2390d695e1712dfb925e8cffca0f 965 Gene3D G3DSA:3.40.640.10 529 758 2.0E-60 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_14975 13fe2390d695e1712dfb925e8cffca0f 965 SUPERFAMILY SSF53383 20 442 1.48E-99 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_14975 13fe2390d695e1712dfb925e8cffca0f 965 Pfam PF02347 Glycine cleavage system P-protein 19 442 2.0E-183 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AVL55_14975 13fe2390d695e1712dfb925e8cffca0f 965 Pfam PF02347 Glycine cleavage system P-protein 465 740 3.5E-7 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AVL55_14975 13fe2390d695e1712dfb925e8cffca0f 965 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 956 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AVL55_14975 13fe2390d695e1712dfb925e8cffca0f 965 Gene3D G3DSA:3.90.1150.10 770 908 1.7E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_14975 13fe2390d695e1712dfb925e8cffca0f 965 SUPERFAMILY SSF53383 484 957 6.34E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_14975 13fe2390d695e1712dfb925e8cffca0f 965 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 962 25.529 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Gene3D G3DSA:3.30.70.1430 639 744 5.4E-141 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 SUPERFAMILY SSF82693 41 131 3.4E-20 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Gene3D G3DSA:3.30.2090.10 792 880 5.4E-141 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 SUPERFAMILY SSF82866 294 509 4.45E-42 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Gene3D G3DSA:1.20.1640.10 518 565 6.4E-161 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 9.3E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 9.3E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.3E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.3E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 9.3E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Pfam PF00873 AcrB/AcrD/AcrF family 4 517 1.3E-138 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Pfam PF00873 AcrB/AcrD/AcrF family 584 1097 2.5E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 SUPERFAMILY SSF82866 879 1098 1.57E-53 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Gene3D G3DSA:3.30.70.1440 745 937 5.4E-141 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Gene3D G3DSA:1.20.1640.10 585 1094 5.4E-141 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Gene3D G3DSA:3.30.2090.10 184 276 6.4E-161 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Gene3D G3DSA:1.20.1640.10 10 517 6.4E-161 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Gene3D G3DSA:3.30.70.1430 40 131 6.4E-161 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 SUPERFAMILY SSF82714 188 268 9.02E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 Gene3D G3DSA:3.30.70.1320 132 329 6.4E-161 T 11-10-2018 AVL55_11575 cdb7514549d31c31f720c56a744186a4 1127 SUPERFAMILY SSF82714 793 879 1.29E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_19655 6b5128673bbb0b37037e890c7646118d 288 SUPERFAMILY SSF46785 1 84 6.49E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_19655 6b5128673bbb0b37037e890c7646118d 288 Gene3D G3DSA:3.40.190.10 165 261 2.1E-30 T 11-10-2018 AVL55_19655 6b5128673bbb0b37037e890c7646118d 288 SUPERFAMILY SSF53850 89 284 3.84E-34 T 11-10-2018 AVL55_19655 6b5128673bbb0b37037e890c7646118d 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.8E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_19655 6b5128673bbb0b37037e890c7646118d 288 Gene3D G3DSA:3.40.190.10 90 284 2.1E-30 T 11-10-2018 AVL55_19655 6b5128673bbb0b37037e890c7646118d 288 Pfam PF03466 LysR substrate binding domain 88 284 1.3E-37 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_19655 6b5128673bbb0b37037e890c7646118d 288 Gene3D G3DSA:1.10.10.10 1 83 1.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 SUPERFAMILY SSF52540 4 239 4.47E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 Gene3D G3DSA:3.40.50.300 282 530 7.0E-54 T 11-10-2018 AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 SUPERFAMILY SSF52540 297 523 1.58E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 SMART SM00382 344 512 7.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 SMART SM00382 26 238 2.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 Pfam PF00005 ABC transporter 336 467 1.2E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 Pfam PF00005 ABC transporter 18 184 1.5E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 Gene3D G3DSA:3.40.50.300 2 281 5.6E-55 T 11-10-2018 AVL55_04190 cbb515dc06e039ffc48fe8f1d30152d7 530 Pfam PF12848 ABC transporter 224 306 2.1E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain AVL55_05200 f65847b14182a90f8630b7967a6282f9 288 PIRSF PIRSF003092 2 282 1.4E-82 T 11-10-2018 IPR025501 ATP binding protein MinD AVL55_05200 f65847b14182a90f8630b7967a6282f9 288 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 19 257 5.0E-22 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AVL55_05200 f65847b14182a90f8630b7967a6282f9 288 Gene3D G3DSA:3.40.50.300 18 258 2.4E-60 T 11-10-2018 AVL55_05200 f65847b14182a90f8630b7967a6282f9 288 SUPERFAMILY SSF52540 19 278 4.78E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17370 039ff68e7f97418d9013c0315d0bfa47 217 SUPERFAMILY SSF56784 4 216 1.35E-20 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_17370 039ff68e7f97418d9013c0315d0bfa47 217 Gene3D G3DSA:1.10.150.240 22 95 2.9E-14 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AVL55_17370 039ff68e7f97418d9013c0315d0bfa47 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 189 1.1E-10 T 11-10-2018 AVL55_17370 039ff68e7f97418d9013c0315d0bfa47 217 Gene3D G3DSA:3.40.50.1000 11 189 2.9E-14 T 11-10-2018 IPR023214 HAD superfamily AVL55_12650 01e51d608e2474c6a5b22b30cd60a8cc 404 Gene3D G3DSA:3.40.47.10 1 253 5.1E-63 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_12650 01e51d608e2474c6a5b22b30cd60a8cc 404 Gene3D G3DSA:3.40.47.10 258 402 1.8E-46 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_12650 01e51d608e2474c6a5b22b30cd60a8cc 404 SMART SM00825 Beta-ketoacyl synthase 4 404 3.1E-11 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AVL55_12650 01e51d608e2474c6a5b22b30cd60a8cc 404 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AVL55_12650 01e51d608e2474c6a5b22b30cd60a8cc 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 3.5E-29 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AVL55_12650 01e51d608e2474c6a5b22b30cd60a8cc 404 SUPERFAMILY SSF53901 1 251 6.89E-61 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_12650 01e51d608e2474c6a5b22b30cd60a8cc 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 6.9E-40 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AVL55_12650 01e51d608e2474c6a5b22b30cd60a8cc 404 SUPERFAMILY SSF53901 213 402 6.17E-59 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 Gene3D G3DSA:3.40.50.10490 448 595 1.0E-150 T 11-10-2018 AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 4.4E-261 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 Pfam PF13522 Glutamine amidotransferase domain 54 182 1.3E-20 T 11-10-2018 AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 SUPERFAMILY SSF53697 246 610 4.92E-114 T 11-10-2018 AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.877 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 SUPERFAMILY SSF56235 2 235 5.66E-74 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 Gene3D G3DSA:3.40.50.10490 250 609 1.0E-150 T 11-10-2018 AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 Pfam PF01380 SIS domain 463 592 2.8E-26 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 Pfam PF01380 SIS domain 291 419 1.1E-33 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AVL55_18955 d7580ea23ab6d965abbdc3d1b26ed36e 610 Gene3D G3DSA:3.60.20.10 2 242 1.4E-78 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SMART SM00267 479 667 1.6E-39 T 11-10-2018 IPR000160 GGDEF domain AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 Pfam PF00990 Diguanylate cyclase, GGDEF domain 491 662 9.8E-38 T 11-10-2018 IPR000160 GGDEF domain AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SUPERFAMILY SSF55073 495 665 1.02E-36 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 Gene3D G3DSA:1.25.40.10 29 193 5.6E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 486 664 6.8E-39 T 11-10-2018 IPR000160 GGDEF domain AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 Gene3D G3DSA:1.25.40.10 198 395 4.5E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 Gene3D G3DSA:3.30.70.270 475 666 1.8E-49 T 11-10-2018 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 Pfam PF13424 Tetratricopeptide repeat 111 183 6.4E-8 T 11-10-2018 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SUPERFAMILY SSF48452 194 397 1.44E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SUPERFAMILY SSF48452 42 187 1.9E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SMART SM00028 272 305 42.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SMART SM00028 72 105 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SMART SM00028 112 145 44.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SMART SM00028 192 225 370.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SMART SM00028 152 185 0.91 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_15340 80bebe19bb59eb87a0857f0942b47f26 710 SMART SM00028 232 265 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09560 1908675f0215a42152b97513348de588 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 267 282 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 251 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 199 218 2.8E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 SUPERFAMILY SSF53738 7 122 6.67E-33 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 SUPERFAMILY SSF53738 182 290 7.06E-27 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 Gene3D G3DSA:3.40.120.10 201 283 4.2E-29 T 11-10-2018 AVL55_09560 1908675f0215a42152b97513348de588 486 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 Gene3D G3DSA:3.40.120.10 284 400 1.4E-32 T 11-10-2018 AVL55_09560 1908675f0215a42152b97513348de588 486 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 407 482 3.5E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 SUPERFAMILY SSF55957 403 485 7.67E-18 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 130 2.2E-31 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 Gene3D G3DSA:3.30.310.50 403 485 1.9E-26 T 11-10-2018 AVL55_09560 1908675f0215a42152b97513348de588 486 Gene3D G3DSA:3.40.120.10 4 145 5.4E-49 T 11-10-2018 AVL55_09560 1908675f0215a42152b97513348de588 486 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 292 401 4.3E-23 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 SUPERFAMILY SSF53738 292 396 2.32E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_09560 1908675f0215a42152b97513348de588 486 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 183 287 1.7E-21 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AVL55_18255 0b9ef87ae0403522a8bfadbdd5ae7918 231 SUPERFAMILY SSF56808 6 225 3.14E-82 T 11-10-2018 IPR023674 Ribosomal protein L1-like AVL55_18255 0b9ef87ae0403522a8bfadbdd5ae7918 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_18255 0b9ef87ae0403522a8bfadbdd5ae7918 231 PIRSF PIRSF002155 1 227 4.4E-80 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_18255 0b9ef87ae0403522a8bfadbdd5ae7918 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.378 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AVL55_18255 0b9ef87ae0403522a8bfadbdd5ae7918 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.5E-106 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AVL55_18255 0b9ef87ae0403522a8bfadbdd5ae7918 231 Gene3D G3DSA:3.30.190.20 21 225 3.6E-82 T 11-10-2018 AVL55_18255 0b9ef87ae0403522a8bfadbdd5ae7918 231 Gene3D G3DSA:3.40.50.790 68 159 3.6E-82 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AVL55_18255 0b9ef87ae0403522a8bfadbdd5ae7918 231 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 2.4E-55 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AVL55_13870 25f05999be034d3f1af6a86750ce0d2f 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 6.4E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC AVL55_13870 25f05999be034d3f1af6a86750ce0d2f 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 6.4E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC AVL55_13870 25f05999be034d3f1af6a86750ce0d2f 111 Pfam PF02699 Preprotein translocase subunit 23 100 4.4E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC AVL55_13870 25f05999be034d3f1af6a86750ce0d2f 111 SMART SM01323 19 103 1.2E-38 T 11-10-2018 IPR003849 Preprotein translocase YajC AVL55_13870 25f05999be034d3f1af6a86750ce0d2f 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 103 3.1E-30 T 11-10-2018 IPR003849 Preprotein translocase YajC AVL55_16485 4edfa5de61f6a2c5d62b7f824603694f 377 PIRSF PIRSF000138 2 377 7.6E-121 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AVL55_16485 4edfa5de61f6a2c5d62b7f824603694f 377 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 11-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AVL55_16485 4edfa5de61f6a2c5d62b7f824603694f 377 Gene3D G3DSA:3.20.20.70 2 377 2.4E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_16485 4edfa5de61f6a2c5d62b7f824603694f 377 Pfam PF01070 FMN-dependent dehydrogenase 13 374 2.6E-125 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AVL55_16485 4edfa5de61f6a2c5d62b7f824603694f 377 SUPERFAMILY SSF51395 5 371 5.25E-96 T 11-10-2018 AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 9.7E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 Gene3D G3DSA:3.40.50.12740 8 206 4.8E-51 T 11-10-2018 AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 SMART SM00448 7 121 1.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 SUPERFAMILY SSF52172 8 133 1.85E-28 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.5E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.5E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.5E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 Pfam PF00072 Response regulator receiver domain 9 121 3.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 SUPERFAMILY SSF46894 133 206 9.18E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_15710 6277a9cbc070b87ae6e6abe789cb8d5d 206 SMART SM00421 143 200 6.6E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_15860 61fa07b3ece57b8650618f9068255de8 441 Pfam PF04225 Opacity-associated protein A LysM-like domain 80 155 3.3E-10 T 11-10-2018 IPR007340 Opacity-associated protein A AVL55_15860 61fa07b3ece57b8650618f9068255de8 441 Pfam PF01551 Peptidase family M23 306 400 7.2E-28 T 11-10-2018 IPR016047 Peptidase M23 AVL55_15860 61fa07b3ece57b8650618f9068255de8 441 SUPERFAMILY SSF51261 165 401 6.28E-66 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_15860 61fa07b3ece57b8650618f9068255de8 441 Gene3D G3DSA:3.10.450.350 184 420 1.4E-78 T 11-10-2018 AVL55_15860 61fa07b3ece57b8650618f9068255de8 441 Gene3D G3DSA:2.70.70.10 277 406 1.4E-78 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_15860 61fa07b3ece57b8650618f9068255de8 441 Gene3D G3DSA:3.10.450.350 70 161 4.7E-15 T 11-10-2018 AVL55_15860 61fa07b3ece57b8650618f9068255de8 441 Pfam PF08525 Opacity-associated protein A N-terminal motif 13 40 6.2E-7 T 11-10-2018 IPR013731 Opacity-associated protein A, N-terminal AVL55_11025 1ef63da35b8a4ee2f2c8907d8210b3d9 427 Gene3D G3DSA:3.65.10.10 20 224 7.2E-155 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AVL55_11025 1ef63da35b8a4ee2f2c8907d8210b3d9 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AVL55_11025 1ef63da35b8a4ee2f2c8907d8210b3d9 427 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AVL55_11025 1ef63da35b8a4ee2f2c8907d8210b3d9 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 35.574 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AVL55_11025 1ef63da35b8a4ee2f2c8907d8210b3d9 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 1.2E-146 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AVL55_11025 1ef63da35b8a4ee2f2c8907d8210b3d9 427 Gene3D G3DSA:3.65.10.10 242 418 7.2E-155 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AVL55_11025 1ef63da35b8a4ee2f2c8907d8210b3d9 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 419 6.1E-154 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AVL55_11025 1ef63da35b8a4ee2f2c8907d8210b3d9 427 SUPERFAMILY SSF55205 1 424 2.09E-140 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AVL55_11025 1ef63da35b8a4ee2f2c8907d8210b3d9 427 PIRSF PIRSF000505 2 427 1.5E-156 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AVL55_03100 9611cd432bc815557750fbd80734e126 539 Gene3D G3DSA:1.10.287.950 208 539 7.5E-73 T 11-10-2018 AVL55_03100 9611cd432bc815557750fbd80734e126 539 SMART SM00304 208 262 1.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_03100 9611cd432bc815557750fbd80734e126 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 8.0E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_03100 9611cd432bc815557750fbd80734e126 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 305 334 8.0E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_03100 9611cd432bc815557750fbd80734e126 539 SUPERFAMILY SSF58104 230 539 3.27E-81 T 11-10-2018 AVL55_03100 9611cd432bc815557750fbd80734e126 539 SMART SM00283 277 538 5.6E-81 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_03100 9611cd432bc815557750fbd80734e126 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 504 2.6E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_18495 f22711ca66a0b274a2c723b5f43806f0 293 SUPERFAMILY SSF117892 57 193 8.76E-31 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AVL55_18495 f22711ca66a0b274a2c723b5f43806f0 293 TIGRFAM TIGR01932 hflC: HflC protein 1 155 3.1E-55 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AVL55_18495 f22711ca66a0b274a2c723b5f43806f0 293 TIGRFAM TIGR01932 hflC: HflC protein 149 288 8.8E-55 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AVL55_18495 f22711ca66a0b274a2c723b5f43806f0 293 Gene3D G3DSA:3.30.479.30 54 190 8.8E-24 T 11-10-2018 AVL55_18495 f22711ca66a0b274a2c723b5f43806f0 293 Pfam PF01145 SPFH domain / Band 7 family 23 204 6.3E-34 T 11-10-2018 IPR001107 Band 7 domain AVL55_18495 f22711ca66a0b274a2c723b5f43806f0 293 SMART SM00244 18 188 1.9E-41 T 11-10-2018 IPR001107 Band 7 domain AVL55_18495 f22711ca66a0b274a2c723b5f43806f0 293 PIRSF PIRSF005651 1 293 4.8E-100 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AVL55_09345 1a8d798703f805c1ce5c3c8d1d43268a 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 270 1.1E-42 T 11-10-2018 AVL55_09345 1a8d798703f805c1ce5c3c8d1d43268a 276 SUPERFAMILY SSF56784 3 274 2.29E-50 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_09345 1a8d798703f805c1ce5c3c8d1d43268a 276 Gene3D G3DSA:3.40.50.1000 3 270 1.9E-47 T 11-10-2018 IPR023214 HAD superfamily AVL55_09345 1a8d798703f805c1ce5c3c8d1d43268a 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 242 7.7E-23 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AVL55_09345 1a8d798703f805c1ce5c3c8d1d43268a 276 Gene3D G3DSA:3.30.1240.10 82 201 1.9E-47 T 11-10-2018 AVL55_09345 1a8d798703f805c1ce5c3c8d1d43268a 276 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 11-10-2018 AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 Gene3D G3DSA:3.20.20.450 507 761 2.8E-87 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 SMART SM00267 335 494 1.6E-7 T 11-10-2018 IPR000160 GGDEF domain AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 Gene3D G3DSA:3.30.70.270 343 506 2.3E-20 T 11-10-2018 AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 480 1.2E-14 T 11-10-2018 IPR000160 GGDEF domain AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 344 477 1.7E-14 T 11-10-2018 IPR000160 GGDEF domain AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 SMART SM00304 287 340 5.4E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 Gene3D G3DSA:1.20.1480.50 250 342 4.2E-11 T 11-10-2018 AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 SUPERFAMILY SSF55073 351 492 1.57E-15 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 SUPERFAMILY SSF158472 287 337 3.27E-6 T 11-10-2018 AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 SUPERFAMILY SSF141868 518 760 1.96E-80 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 SMART SM00052 505 752 1.0E-98 T 11-10-2018 IPR001633 EAL domain AVL55_09315 f66ce5f82a13a3453bf6db92c0abcf3e 764 Pfam PF00563 EAL domain 512 747 2.9E-68 T 11-10-2018 IPR001633 EAL domain AVL55_11555 d598648720ab2c0c073340f7c8bfc505 245 Gene3D G3DSA:3.20.20.370 1 245 1.2E-89 T 11-10-2018 AVL55_11555 d598648720ab2c0c073340f7c8bfc505 245 Pfam PF03746 LamB/YcsF family 2 244 4.8E-86 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AVL55_11555 d598648720ab2c0c073340f7c8bfc505 245 SUPERFAMILY SSF88713 1 245 3.26E-83 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AVL55_09595 dcd21603e2c7f5d19ec55bae7a1aafb9 236 Gene3D G3DSA:3.10.20.30 1 104 2.5E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_09595 dcd21603e2c7f5d19ec55bae7a1aafb9 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 109 4.3E-32 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09595 dcd21603e2c7f5d19ec55bae7a1aafb9 236 Gene3D G3DSA:1.10.1060.10 105 236 1.6E-59 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AVL55_09595 dcd21603e2c7f5d19ec55bae7a1aafb9 236 SUPERFAMILY SSF54292 1 104 2.91E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AVL55_09595 dcd21603e2c7f5d19ec55bae7a1aafb9 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AVL55_09595 dcd21603e2c7f5d19ec55bae7a1aafb9 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 7.1E-10 T 11-10-2018 AVL55_09595 dcd21603e2c7f5d19ec55bae7a1aafb9 236 SUPERFAMILY SSF46548 105 233 5.93E-41 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AVL55_09595 dcd21603e2c7f5d19ec55bae7a1aafb9 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 228 9.5E-89 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_02210 f2bf0c8305a4cf325b8a31484136d634 108 PIRSF PIRSF000077 2 108 4.9E-44 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AVL55_02210 f2bf0c8305a4cf325b8a31484136d634 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AVL55_02210 f2bf0c8305a4cf325b8a31484136d634 108 Pfam PF00085 Thioredoxin 5 106 7.1E-34 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AVL55_02210 f2bf0c8305a4cf325b8a31484136d634 108 SUPERFAMILY SSF52833 2 108 1.8E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_02210 f2bf0c8305a4cf325b8a31484136d634 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 11-10-2018 AVL55_02210 f2bf0c8305a4cf325b8a31484136d634 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 11-10-2018 AVL55_02210 f2bf0c8305a4cf325b8a31484136d634 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 11-10-2018 AVL55_02210 f2bf0c8305a4cf325b8a31484136d634 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 5.3E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AVL55_02210 f2bf0c8305a4cf325b8a31484136d634 108 Gene3D G3DSA:3.40.30.10 1 108 5.6E-37 T 11-10-2018 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 403 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 180 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 371 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 126 150 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 280 301 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 413 432 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 218 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 229 248 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 49 74 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 122 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 341 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 463 484 6.0E-96 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 4 649 0.0 T 11-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 58 506 6.8E-133 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 Gene3D G3DSA:1.20.210.10 21 565 9.1E-185 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 282 336 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19115 5b5c7d4bf18d2c68147641c01faa91d7 662 SUPERFAMILY SSF81442 45 560 1.3E-174 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_15275 ac192e1cd1e22920492be858e26efb9b 313 Gene3D G3DSA:1.10.150.170 115 217 9.9E-107 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AVL55_15275 ac192e1cd1e22920492be858e26efb9b 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 312 1.4E-124 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AVL55_15275 ac192e1cd1e22920492be858e26efb9b 313 Pfam PF01795 MraW methylase family 6 312 5.9E-117 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AVL55_15275 ac192e1cd1e22920492be858e26efb9b 313 SUPERFAMILY SSF81799 117 216 2.75E-34 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AVL55_15275 ac192e1cd1e22920492be858e26efb9b 313 SUPERFAMILY SSF53335 9 313 1.17E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_15275 ac192e1cd1e22920492be858e26efb9b 313 Gene3D G3DSA:3.40.50.150 12 312 9.9E-107 T 11-10-2018 AVL55_15275 ac192e1cd1e22920492be858e26efb9b 313 PIRSF PIRSF004486 3 313 7.1E-106 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AVL55_15275 ac192e1cd1e22920492be858e26efb9b 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 313 38.536 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AVL55_17060 7a7beae1d52996a6fea729eacb4f929a 254 SMART SM00900 145 241 2.4E-26 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AVL55_17060 7a7beae1d52996a6fea729eacb4f929a 254 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 251 34.269 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AVL55_17060 7a7beae1d52996a6fea729eacb4f929a 254 Pfam PF04205 FMN-binding domain 145 237 3.5E-13 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AVL55_17060 7a7beae1d52996a6fea729eacb4f929a 254 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 249 2.0E-77 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AVL55_17060 7a7beae1d52996a6fea729eacb4f929a 254 PIRSF PIRSF009437 1 253 1.4E-85 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AVL55_03780 d0995ce11a7cfdb11b17143b0b5cb955 300 Gene3D G3DSA:3.40.1350.10 17 198 2.5E-27 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AVL55_03780 d0995ce11a7cfdb11b17143b0b5cb955 300 SUPERFAMILY SSF52980 29 186 9.65E-16 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AVL55_03780 d0995ce11a7cfdb11b17143b0b5cb955 300 Pfam PF08722 TnsA endonuclease N terminal 81 195 1.4E-11 T 11-10-2018 IPR014833 TnsA endonuclease, N-terminal AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 SUPERFAMILY SSF53732 379 856 4.97E-148 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 Gene3D G3DSA:1.25.40.310 1 160 4.5E-68 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 Pfam PF11791 Aconitate B N-terminal domain 4 156 3.3E-64 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 Gene3D G3DSA:3.20.19.10 162 361 1.6E-72 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 PIRSF PIRSF036687 1 859 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 Pfam PF00330 Aconitase family (aconitate hydratase) 471 818 5.0E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 SUPERFAMILY SSF74778 2 159 3.66E-66 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 SUPERFAMILY SSF52016 164 372 4.32E-68 T 11-10-2018 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 Gene3D G3DSA:3.40.1060.10 385 681 5.1E-150 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 Gene3D G3DSA:3.30.499.10 683 864 1.9E-64 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 Gene3D G3DSA:3.30.499.10 402 529 5.1E-150 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 382 1.0E-93 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_03290 88339c811a54ab7c20f1acd9dea64db6 870 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AVL55_00810 9b813e95f0e2d602f7e7d3731cb14268 268 Pfam PF06426 Serine acetyltransferase, N-terminal 11 113 2.1E-34 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AVL55_00810 9b813e95f0e2d602f7e7d3731cb14268 268 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 203 231 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AVL55_00810 9b813e95f0e2d602f7e7d3731cb14268 268 SUPERFAMILY SSF51161 11 247 6.79E-62 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_00810 9b813e95f0e2d602f7e7d3731cb14268 268 Gene3D G3DSA:1.10.3130.10 3 143 1.2E-48 T 11-10-2018 AVL55_00810 9b813e95f0e2d602f7e7d3731cb14268 268 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 194 228 3.5E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_00810 9b813e95f0e2d602f7e7d3731cb14268 268 SMART SM00971 10 114 1.0E-51 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AVL55_00810 9b813e95f0e2d602f7e7d3731cb14268 268 PIRSF PIRSF000441 76 267 7.0E-60 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AVL55_00810 9b813e95f0e2d602f7e7d3731cb14268 268 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 84 243 7.2E-70 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AVL55_00810 9b813e95f0e2d602f7e7d3731cb14268 268 Gene3D G3DSA:2.160.10.10 144 265 5.7E-36 T 11-10-2018 AVL55_15360 617656e24b6d19ba62db1a27520c727c 374 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 283 372 1.3E-19 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AVL55_15360 617656e24b6d19ba62db1a27520c727c 374 Gene3D G3DSA:3.40.47.10 1 214 4.1E-54 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_15360 617656e24b6d19ba62db1a27520c727c 374 Gene3D G3DSA:3.40.47.10 219 374 1.8E-37 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_15360 617656e24b6d19ba62db1a27520c727c 374 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 151 218 2.7E-15 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AVL55_15360 617656e24b6d19ba62db1a27520c727c 374 SUPERFAMILY SSF53901 3 373 1.44E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_03790 55a737959e75f6edde6218b6fa7939d1 431 SUPERFAMILY SSF52540 118 273 7.58E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_03790 55a737959e75f6edde6218b6fa7939d1 431 Gene3D G3DSA:3.40.50.300 113 288 1.5E-5 T 11-10-2018 AVL55_03790 55a737959e75f6edde6218b6fa7939d1 431 Pfam PF13401 AAA domain 121 273 9.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_14920 941832959580220a3be645a00d9d9f1f 100 Pfam PF00547 Urease, gamma subunit 1 99 2.5E-46 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14920 941832959580220a3be645a00d9d9f1f 100 PIRSF PIRSF001223 1 100 6.1E-49 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14920 941832959580220a3be645a00d9d9f1f 100 Gene3D G3DSA:3.30.280.10 1 100 3.2E-47 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14920 941832959580220a3be645a00d9d9f1f 100 SUPERFAMILY SSF54111 1 99 6.41E-45 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14920 941832959580220a3be645a00d9d9f1f 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.56 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14920 941832959580220a3be645a00d9d9f1f 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.5E-49 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14920 941832959580220a3be645a00d9d9f1f 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 9.0E-39 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Gene3D G3DSA:1.10.287.130 479 576 3.6E-25 T 11-10-2018 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Pfam PF00072 Response regulator receiver domain 924 1042 3.3E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 SMART SM00388 513 578 3.8E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 SUPERFAMILY SSF47384 499 579 4.51E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 SUPERFAMILY SSF47226 1161 1257 2.06E-14 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 SUPERFAMILY SSF103190 54 227 3.14E-41 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Gene3D G3DSA:1.20.120.160 1157 1260 2.5E-12 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Gene3D G3DSA:3.30.450.20 99 228 4.4E-36 T 11-10-2018 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Gene3D G3DSA:3.30.450.20 356 478 5.9E-12 T 11-10-2018 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 SMART SM00387 625 743 3.9E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Gene3D G3DSA:3.40.50.2300 902 1049 3.4E-36 T 11-10-2018 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 SUPERFAMILY SSF55874 567 737 1.57E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 SMART SM00448 921 1042 1.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 SUPERFAMILY SSF52172 919 1046 1.71E-32 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Pfam PF02743 Cache domain 46 289 8.8E-18 T 11-10-2018 IPR033479 Double Cache domain 1 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 680 9.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 PRINTS PR00344 Bacterial sensor protein C-terminal signature 725 738 9.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 694 9.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 PRINTS PR00344 Bacterial sensor protein C-terminal signature 701 719 9.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Gene3D G3DSA:3.30.565.10 577 743 4.8E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 626 739 2.8E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 Pfam PF00512 His Kinase A (phospho-acceptor) domain 514 578 7.7E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_08455 a3d44a89f6e21e6d450faf17d199dffa 1260 SUPERFAMILY SSF55785 376 484 1.74E-9 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 SUPERFAMILY SSF51905 82 442 4.07E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 85 403 2.8E-64 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 PIRSF PIRSF000350 1 546 5.3E-250 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 Gene3D G3DSA:3.50.50.60 230 346 8.8E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 TIGRFAM TIGR02053 MerA: mercury(II) reductase 85 545 4.3E-161 T 11-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 Gene3D G3DSA:3.50.50.60 87 404 8.8E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 SUPERFAMILY SSF55424 418 544 4.3E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 SUPERFAMILY SSF55008 3 66 4.97E-13 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 Gene3D G3DSA:3.30.70.100 1 66 8.2E-13 T 11-10-2018 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 119 129 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 422 528 5.7E-28 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 Pfam PF00403 Heavy-metal-associated domain 4 62 2.9E-8 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 Gene3D G3DSA:3.30.390.30 421 546 4.5E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 PRINTS PR00945 Mercuric reductase class II signature 257 274 2.9E-65 T 11-10-2018 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 PRINTS PR00945 Mercuric reductase class II signature 519 538 2.9E-65 T 11-10-2018 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 PRINTS PR00945 Mercuric reductase class II signature 277 292 2.9E-65 T 11-10-2018 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 PRINTS PR00945 Mercuric reductase class II signature 95 113 2.9E-65 T 11-10-2018 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 PRINTS PR00945 Mercuric reductase class II signature 454 474 2.9E-65 T 11-10-2018 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 PRINTS PR00945 Mercuric reductase class II signature 131 150 2.9E-65 T 11-10-2018 AVL55_12305 44e038c3bf724ad1e553e7b7d57d87b3 546 PRINTS PR00945 Mercuric reductase class II signature 222 239 2.9E-65 T 11-10-2018 AVL55_03400 26ce873110e02d6f35a953a02bc135af 318 Gene3D G3DSA:1.10.287.1080 164 313 9.2E-47 T 11-10-2018 AVL55_03400 26ce873110e02d6f35a953a02bc135af 318 Gene3D G3DSA:1.10.287.1080 7 150 3.9E-46 T 11-10-2018 AVL55_03400 26ce873110e02d6f35a953a02bc135af 318 SUPERFAMILY SSF101386 12 109 1.14E-24 T 11-10-2018 AVL55_03400 26ce873110e02d6f35a953a02bc135af 318 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 202 281 5.7E-6 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AVL55_03400 26ce873110e02d6f35a953a02bc135af 318 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 35 108 1.6E-28 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AVL55_03400 26ce873110e02d6f35a953a02bc135af 318 SUPERFAMILY SSF101386 170 289 6.92E-22 T 11-10-2018 AVL55_03400 26ce873110e02d6f35a953a02bc135af 318 TIGRFAM TIGR00444 mazG: MazG family protein 18 310 4.9E-88 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG AVL55_14625 4f5ca2ecb4bf4d2ec3806f4173697841 169 SUPERFAMILY SSF47741 83 166 2.88E-25 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AVL55_14625 4f5ca2ecb4bf4d2ec3806f4173697841 169 Gene3D G3DSA:3.10.20.30 1 75 2.4E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_14625 4f5ca2ecb4bf4d2ec3806f4173697841 169 Pfam PF01799 [2Fe-2S] binding domain 72 160 5.6E-29 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AVL55_14625 4f5ca2ecb4bf4d2ec3806f4173697841 169 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AVL55_14625 4f5ca2ecb4bf4d2ec3806f4173697841 169 Gene3D G3DSA:1.10.150.120 76 167 6.8E-31 T 11-10-2018 AVL55_14625 4f5ca2ecb4bf4d2ec3806f4173697841 169 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 53 6.6E-8 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AVL55_14625 4f5ca2ecb4bf4d2ec3806f4173697841 169 SUPERFAMILY SSF54292 3 77 3.15E-25 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 TIGRFAM TIGR00492 alr: alanine racemase 3 354 2.2E-102 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 Hamap MF_01201 Alanine racemase. 2 356 32.436 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 SUPERFAMILY SSF51419 9 233 2.91E-57 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 SUPERFAMILY SSF50621 225 355 1.33E-49 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 SMART SM01005 232 356 1.5E-70 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 1.7E-46 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 Gene3D G3DSA:3.20.20.10 11 217 4.6E-121 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 Gene3D G3DSA:2.40.37.10 9 351 4.6E-121 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 7.1E-57 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 PRINTS PR00992 Alanine racemase signature 286 303 4.9E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 PRINTS PR00992 Alanine racemase signature 27 43 4.9E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 PRINTS PR00992 Alanine racemase signature 338 351 4.9E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 PRINTS PR00992 Alanine racemase signature 155 166 4.9E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 PRINTS PR00992 Alanine racemase signature 248 263 4.9E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 PRINTS PR00992 Alanine racemase signature 192 219 4.9E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 PRINTS PR00992 Alanine racemase signature 122 134 4.9E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 PRINTS PR00992 Alanine racemase signature 62 80 4.9E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_02345 7069216e6c466c7beb782ef21f65fd6f 358 PRINTS PR00992 Alanine racemase signature 265 280 4.9E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_14025 53c2c727a389ff2a8524c6e0d1030231 403 Gene3D G3DSA:3.40.50.2000 210 387 9.2E-19 T 11-10-2018 AVL55_14025 53c2c727a389ff2a8524c6e0d1030231 403 Gene3D G3DSA:3.40.50.2000 163 391 9.2E-19 T 11-10-2018 AVL55_14025 53c2c727a389ff2a8524c6e0d1030231 403 SUPERFAMILY SSF53756 6 392 8.16E-28 T 11-10-2018 AVL55_14025 53c2c727a389ff2a8524c6e0d1030231 403 Pfam PF13692 Glycosyl transferases group 1 231 367 5.1E-25 T 11-10-2018 AVL55_14025 53c2c727a389ff2a8524c6e0d1030231 403 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 7 401 1.4E-100 T 11-10-2018 IPR017521 Sugar transferase, PEP-CTERM, Stp1 AVL55_08630 33f1922a73104f7ca853c6f4ceea5b5e 380 Gene3D G3DSA:3.90.1200.10 162 308 3.0E-6 T 11-10-2018 AVL55_08630 33f1922a73104f7ca853c6f4ceea5b5e 380 SMART SM00587 150 313 7.4E-6 T 11-10-2018 IPR015897 CHK kinase-like AVL55_08630 33f1922a73104f7ca853c6f4ceea5b5e 380 Pfam PF02958 Ecdysteroid kinase 216 312 1.2E-13 T 11-10-2018 IPR004119 Protein of unknown function DUF227 AVL55_08630 33f1922a73104f7ca853c6f4ceea5b5e 380 Pfam PF02958 Ecdysteroid kinase 111 185 4.6E-7 T 11-10-2018 IPR004119 Protein of unknown function DUF227 AVL55_08630 33f1922a73104f7ca853c6f4ceea5b5e 380 SUPERFAMILY SSF56112 83 356 1.1E-21 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_04220 7e94f076a11c13a2d6110d5759b4d903 788 Gene3D G3DSA:2.170.130.10 27 163 1.0E-37 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_04220 7e94f076a11c13a2d6110d5759b4d903 788 Gene3D G3DSA:2.40.170.20 169 788 9.4E-120 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_04220 7e94f076a11c13a2d6110d5759b4d903 788 SUPERFAMILY SSF56935 32 788 2.38E-121 T 11-10-2018 AVL55_04220 7e94f076a11c13a2d6110d5759b4d903 788 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 158 3.9E-27 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_04220 7e94f076a11c13a2d6110d5759b4d903 788 Pfam PF00593 TonB dependent receptor 317 786 3.9E-53 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 SUPERFAMILY SSF53623 124 354 1.49E-46 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 Gene3D G3DSA:3.90.190.20 359 491 5.5E-41 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 SUPERFAMILY SSF51984 5 105 2.88E-11 T 11-10-2018 AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 Pfam PF02875 Mur ligase family, glutamate ligase domain 358 421 4.1E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 493 6.6E-115 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 Gene3D G3DSA:3.40.1190.10 119 358 3.0E-46 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 Gene3D G3DSA:3.40.50.720 4 104 1.1E-13 T 11-10-2018 AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 495 31.75 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 Pfam PF08245 Mur ligase middle domain 129 336 2.3E-27 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AVL55_15245 8c95f74a667853f7ec9aeb3a05e2937b 510 SUPERFAMILY SSF53244 358 495 9.77E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 200 215 2.1E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 200 2.1E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 Gene3D G3DSA:2.60.120.10 34 155 2.2E-41 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 SMART SM00100 21 142 5.1E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 Gene3D G3DSA:1.10.10.10 156 236 1.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 SMART SM00419 178 226 2.3E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 Pfam PF13545 Crp-like helix-turn-helix domain 159 231 8.0E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 SUPERFAMILY SSF51206 14 152 1.44E-26 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 SUPERFAMILY SSF46785 157 231 5.02E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_10775 b1bb65458def2e7d7c1ef01b8aea9dd7 245 Pfam PF00027 Cyclic nucleotide-binding domain 42 123 1.5E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AVL55_03545 ae4f07aea33bf118e189ce1d11ecf77c 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.3E-28 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AVL55_03545 ae4f07aea33bf118e189ce1d11ecf77c 95 SUPERFAMILY SSF69754 1 95 3.4E-36 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AVL55_03545 ae4f07aea33bf118e189ce1d11ecf77c 95 Gene3D G3DSA:3.30.160.100 1 95 1.1E-37 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AVL55_03545 ae4f07aea33bf118e189ce1d11ecf77c 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.4E-34 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 Gene3D G3DSA:3.40.50.2300 1011 1146 1.1E-22 T 11-10-2018 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 943 3.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 979 3.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 998 3.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 947 957 3.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 Pfam PF00512 His Kinase A (phospho-acceptor) domain 784 849 2.7E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 Gene3D G3DSA:3.30.565.10 846 999 1.8E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_17180 a9274900130f24acffde316ce64431a5 1147 SUPERFAMILY SSF55874 839 998 1.44E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_17180 a9274900130f24acffde316ce64431a5 1147 SUPERFAMILY SSF52172 1018 1142 9.25E-24 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_17180 a9274900130f24acffde316ce64431a5 1147 Gene3D G3DSA:1.10.287.130 748 845 3.8E-13 T 11-10-2018 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 SUPERFAMILY SSF47384 770 850 2.75E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 SUPERFAMILY SSF55785 606 723 3.02E-5 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_17180 a9274900130f24acffde316ce64431a5 1147 Pfam PF12860 PAS fold 616 729 8.2E-42 T 11-10-2018 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 SMART SM00448 1020 1134 1.4E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 SMART SM00388 784 849 6.4E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 Gene3D G3DSA:3.30.450.20 596 737 1.5E-8 T 11-10-2018 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 894 999 3.1E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_17180 a9274900130f24acffde316ce64431a5 1147 SMART SM00387 893 1001 2.3E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_17180 a9274900130f24acffde316ce64431a5 1147 Pfam PF00072 Response regulator receiver domain 1022 1134 1.9E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17180 a9274900130f24acffde316ce64431a5 1147 Gene3D G3DSA:1.20.1730.10 31 533 9.0E-17 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AVL55_04555 f1b76a3b2ba9a6b9f5796da5a1b61cbc 224 SMART SM00382 30 198 6.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_04555 f1b76a3b2ba9a6b9f5796da5a1b61cbc 224 SUPERFAMILY SSF52540 2 209 2.05E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04555 f1b76a3b2ba9a6b9f5796da5a1b61cbc 224 Pfam PF00005 ABC transporter 22 152 8.0E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_04555 f1b76a3b2ba9a6b9f5796da5a1b61cbc 224 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_04555 f1b76a3b2ba9a6b9f5796da5a1b61cbc 224 Gene3D G3DSA:3.40.50.300 1 223 6.8E-38 T 11-10-2018 AVL55_00005 419186b13ea984cf8af48460100d94c9 552 Pfam PF11638 DnaA N-terminal domain 1 62 1.1E-20 T 11-10-2018 IPR024633 DnaA N-terminal domain AVL55_00005 419186b13ea984cf8af48460100d94c9 552 Gene3D G3DSA:3.40.50.300 206 381 8.5E-49 T 11-10-2018 AVL55_00005 419186b13ea984cf8af48460100d94c9 552 Gene3D G3DSA:1.10.8.60 383 453 2.8E-24 T 11-10-2018 AVL55_00005 419186b13ea984cf8af48460100d94c9 552 Gene3D G3DSA:3.30.300.180 1 106 8.6E-34 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily AVL55_00005 419186b13ea984cf8af48460100d94c9 552 SMART SM00760 460 529 2.1E-44 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AVL55_00005 419186b13ea984cf8af48460100d94c9 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 348 375 6.4E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AVL55_00005 419186b13ea984cf8af48460100d94c9 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 510 529 6.4E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AVL55_00005 419186b13ea984cf8af48460100d94c9 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 314 328 6.4E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AVL55_00005 419186b13ea984cf8af48460100d94c9 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 250 270 6.4E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AVL55_00005 419186b13ea984cf8af48460100d94c9 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 282 296 6.4E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AVL55_00005 419186b13ea984cf8af48460100d94c9 552 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 550 5.0E-184 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AVL55_00005 419186b13ea984cf8af48460100d94c9 552 SUPERFAMILY SSF52540 217 428 1.27E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00005 419186b13ea984cf8af48460100d94c9 552 SUPERFAMILY SSF48295 449 551 3.14E-37 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AVL55_00005 419186b13ea984cf8af48460100d94c9 552 Gene3D G3DSA:1.10.1750.10 459 552 1.8E-38 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AVL55_00005 419186b13ea984cf8af48460100d94c9 552 Pfam PF00308 Bacterial dnaA protein 218 434 1.6E-98 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AVL55_00005 419186b13ea984cf8af48460100d94c9 552 ProSitePatterns PS01008 DnaA protein signature. 510 529 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AVL55_00005 419186b13ea984cf8af48460100d94c9 552 SMART SM00382 249 451 8.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_00005 419186b13ea984cf8af48460100d94c9 552 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 551 34.412 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AVL55_00005 419186b13ea984cf8af48460100d94c9 552 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 461 529 1.7E-31 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.8E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.8E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.8E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.8E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.8E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 Gene3D G3DSA:3.40.50.720 2 249 2.5E-47 T 11-10-2018 AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 Pfam PF00106 short chain dehydrogenase 6 198 1.0E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13585 4673e320ce24cd9d852a3b605bdeda6d 250 SUPERFAMILY SSF51735 4 246 4.45E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_05970 ed5e10ce30d8500bc52da356a185a8ce 374 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 74 161 2.9E-22 T 11-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AVL55_00495 670cb260e0670b6428e897bd2d5663d0 408 Pfam PF06738 Putative threonine/serine exporter 11 252 2.9E-62 T 11-10-2018 IPR010619 Putative threonine/serine exporter AVL55_00495 670cb260e0670b6428e897bd2d5663d0 408 Pfam PF12821 Threonine/Serine exporter, ThrE 275 400 1.1E-12 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE AVL55_02110 af7f746f7d373f6c232d13990e98ee3b 347 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 331 7.0E-86 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AVL55_02110 af7f746f7d373f6c232d13990e98ee3b 347 Gene3D G3DSA:3.40.50.300 102 273 2.2E-48 T 11-10-2018 AVL55_02110 af7f746f7d373f6c232d13990e98ee3b 347 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 338 36.076 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AVL55_02110 af7f746f7d373f6c232d13990e98ee3b 347 Pfam PF03193 RsgA GTPase 99 274 1.8E-55 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AVL55_02110 af7f746f7d373f6c232d13990e98ee3b 347 Gene3D G3DSA:1.10.40.50 274 343 6.1E-23 T 11-10-2018 AVL55_02110 af7f746f7d373f6c232d13990e98ee3b 347 Gene3D G3DSA:2.40.50.140 39 101 1.9E-20 T 11-10-2018 AVL55_02110 af7f746f7d373f6c232d13990e98ee3b 347 SUPERFAMILY SSF52540 113 337 3.44E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SUPERFAMILY SSF55874 530 692 3.8E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Gene3D G3DSA:3.30.450.20 81 201 3.3E-7 T 11-10-2018 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Pfam PF00072 Response regulator receiver domain 723 831 1.4E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SMART SM00448 718 831 8.8E-4 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SMART SM00388 475 539 2.3E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Gene3D G3DSA:3.30.450.20 202 282 5.9E-7 T 11-10-2018 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SUPERFAMILY SSF55785 81 195 3.62E-7 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SMART SM00091 214 284 8.1 T 11-10-2018 IPR000014 PAS domain AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SMART SM00091 94 162 2.9 T 11-10-2018 IPR000014 PAS domain AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SMART SM00091 324 390 0.53 T 11-10-2018 IPR000014 PAS domain AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Gene3D G3DSA:1.10.287.130 462 541 4.8E-9 T 11-10-2018 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Gene3D G3DSA:3.30.565.10 542 702 2.1E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 2.6E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 2.6E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 690 2.6E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 671 2.6E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SUPERFAMILY SSF47384 460 539 1.02E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 584 691 1.4E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SUPERFAMILY SSF55785 203 254 2.97E-6 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Pfam PF08448 PAS fold 331 438 4.8E-15 T 11-10-2018 IPR013656 PAS fold-4 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Gene3D G3DSA:3.30.450.20 316 453 4.8E-16 T 11-10-2018 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Pfam PF13188 PAS domain 94 127 0.058 T 11-10-2018 IPR000014 PAS domain AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Pfam PF13188 PAS domain 215 245 0.0053 T 11-10-2018 IPR000014 PAS domain AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Pfam PF00512 His Kinase A (phospho-acceptor) domain 475 539 4.5E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 Gene3D G3DSA:3.40.50.2300 715 837 9.3E-14 T 11-10-2018 AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SMART SM00387 583 693 2.3E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 321 443 1.2E-7 T 11-10-2018 IPR000014 PAS domain AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SUPERFAMILY SSF55785 309 435 3.84E-12 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_16405 77b5b936962663dc2044b1d8d1f6591c 837 SUPERFAMILY SSF52172 718 835 5.13E-13 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_04960 7c45f28c1f27f20538a63f0b627919cc 356 Gene3D G3DSA:3.20.20.70 8 282 8.5E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_04960 7c45f28c1f27f20538a63f0b627919cc 356 SMART SM00858 297 355 1.6E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AVL55_04960 7c45f28c1f27f20538a63f0b627919cc 356 SUPERFAMILY SSF51569 9 307 1.95E-88 T 11-10-2018 AVL55_04960 7c45f28c1f27f20538a63f0b627919cc 356 Pfam PF03102 NeuB family 42 282 2.8E-89 T 11-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 AVL55_04960 7c45f28c1f27f20538a63f0b627919cc 356 Gene3D G3DSA:3.90.1210.10 298 356 4.3E-17 T 11-10-2018 AVL55_04960 7c45f28c1f27f20538a63f0b627919cc 356 Pfam PF08666 SAF domain 298 354 7.1E-9 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AVL55_04960 7c45f28c1f27f20538a63f0b627919cc 356 SUPERFAMILY SSF51269 294 354 6.75E-15 T 11-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 AVL55_04960 7c45f28c1f27f20538a63f0b627919cc 356 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 21 349 2.1E-149 T 11-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 398 2.0E-126 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 317 9.4E-79 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 SUPERFAMILY SSF52374 8 315 3.99E-96 T 11-10-2018 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 Gene3D G3DSA:1.10.240.10 218 326 1.6E-34 T 11-10-2018 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 48.473 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 8.4E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 8.4E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 8.4E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 8.4E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 SUPERFAMILY SSF55174 320 398 8.77E-19 T 11-10-2018 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 Pfam PF13275 S4 domain 331 370 5.8E-6 T 11-10-2018 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 Gene3D G3DSA:3.40.50.620 5 217 3.6E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_15855 5bd3ed09288fc55e8fdac654048d8853 399 Gene3D G3DSA:3.10.290.10 327 398 2.5E-19 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AVL55_17200 fb44d48da810004f9f81f8a7e1a7593b 144 SUPERFAMILY SSF50630 6 140 1.08E-40 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AVL55_17200 fb44d48da810004f9f81f8a7e1a7593b 144 Pfam PF05618 Putative ATP-dependant zinc protease 6 139 5.9E-32 T 11-10-2018 AVL55_17200 fb44d48da810004f9f81f8a7e1a7593b 144 Gene3D G3DSA:2.40.70.10 3 133 1.7E-33 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AVL55_11355 fdbd5fee56a17e7c83388923a4219925 584 SUPERFAMILY SSF51445 56 542 2.55E-95 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_11355 fdbd5fee56a17e7c83388923a4219925 584 Gene3D G3DSA:3.90.400.10 145 218 9.1E-157 T 11-10-2018 AVL55_11355 fdbd5fee56a17e7c83388923a4219925 584 Pfam PF00128 Alpha amylase, catalytic domain 93 348 7.6E-17 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_11355 fdbd5fee56a17e7c83388923a4219925 584 PIRSF PIRSF003059 7 580 1.6E-175 T 11-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related AVL55_11355 fdbd5fee56a17e7c83388923a4219925 584 Gene3D G3DSA:2.60.40.1180 506 579 2.1E-9 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_11355 fdbd5fee56a17e7c83388923a4219925 584 Gene3D G3DSA:3.20.20.80 63 468 9.1E-157 T 11-10-2018 AVL55_11355 fdbd5fee56a17e7c83388923a4219925 584 SMART SM00642 60 491 2.0E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 SMART SM01230 102 379 6.3E-152 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 8.0E-209 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 9.6E-138 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 95 3.4E-29 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 Gene3D G3DSA:3.30.590.10 105 457 1.5E-147 T 11-10-2018 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 SUPERFAMILY SSF55931 102 468 1.57E-136 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 Gene3D G3DSA:3.10.20.70 2 104 4.6E-38 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AVL55_16000 1ad6e84c158deac2976d96ded54bbbf6 469 SUPERFAMILY SSF54368 3 100 2.62E-33 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AVL55_12070 cd5b400abd8620f8c3335f5ae7b4bbd7 379 Pfam PF00246 Zinc carboxypeptidase 129 341 5.9E-24 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AVL55_12070 cd5b400abd8620f8c3335f5ae7b4bbd7 379 Gene3D G3DSA:2.60.40.3120 1 112 3.2E-43 T 11-10-2018 AVL55_12070 cd5b400abd8620f8c3335f5ae7b4bbd7 379 Gene3D G3DSA:3.40.630.10 113 376 2.7E-70 T 11-10-2018 AVL55_12070 cd5b400abd8620f8c3335f5ae7b4bbd7 379 SMART SM00631 114 354 5.4E-4 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AVL55_12070 cd5b400abd8620f8c3335f5ae7b4bbd7 379 SUPERFAMILY SSF53187 105 373 9.78E-60 T 11-10-2018 AVL55_13130 73fc34fc212b4f3b19a663807509c8d3 283 Gene3D G3DSA:3.20.20.150 3 279 1.4E-85 T 11-10-2018 AVL55_13130 73fc34fc212b4f3b19a663807509c8d3 283 Pfam PF05114 Protein of unknown function (DUF692) 6 267 2.4E-100 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 AVL55_13130 73fc34fc212b4f3b19a663807509c8d3 283 SUPERFAMILY SSF51658 27 250 2.49E-9 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AVL55_15575 bf9d42464c3c83a9670ecda5a20266a6 132 Gene3D G3DSA:3.40.50.2300 3 124 2.8E-28 T 11-10-2018 AVL55_15575 bf9d42464c3c83a9670ecda5a20266a6 132 SMART SM00448 3 115 1.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15575 bf9d42464c3c83a9670ecda5a20266a6 132 SUPERFAMILY SSF52172 3 118 1.42E-30 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_15575 bf9d42464c3c83a9670ecda5a20266a6 132 Pfam PF00072 Response regulator receiver domain 5 115 4.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 SMART SM00267 824 994 4.8E-47 T 11-10-2018 IPR000160 GGDEF domain AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 832 992 1.6E-47 T 11-10-2018 IPR000160 GGDEF domain AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 Gene3D G3DSA:3.30.70.270 828 994 5.9E-52 T 11-10-2018 AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 SUPERFAMILY SSF55073 840 993 2.51E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 Pfam PF07495 Y_Y_Y domain 710 773 4.7E-14 T 11-10-2018 IPR011123 Two component regulator three Y AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 Pfam PF00990 Diguanylate cyclase, GGDEF domain 837 991 1.3E-43 T 11-10-2018 IPR000160 GGDEF domain AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 Gene3D G3DSA:2.130.10.10 402 653 2.4E-31 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 Gene3D G3DSA:2.60.40.10 655 779 4.5E-30 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 Gene3D G3DSA:2.130.10.10 40 346 6.5E-53 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 SUPERFAMILY SSF63829 105 339 1.21E-11 T 11-10-2018 AVL55_08730 bf7b19881306da444fa3aa9af8181231 994 SUPERFAMILY SSF63829 356 540 3.71E-10 T 11-10-2018 AVL55_16630 cbe027dd200fd1d58e4833e887153890 882 Pfam PF00593 TonB dependent receptor 360 875 3.9E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_16630 cbe027dd200fd1d58e4833e887153890 882 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 174 1.1E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_16630 cbe027dd200fd1d58e4833e887153890 882 SUPERFAMILY SSF56935 40 875 8.85E-97 T 11-10-2018 AVL55_16630 cbe027dd200fd1d58e4833e887153890 882 Gene3D G3DSA:2.170.130.10 37 178 8.7E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Gene3D G3DSA:3.30.70.870 288 369 2.4E-34 T 11-10-2018 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Gene3D G3DSA:3.30.70.2570 481 555 2.9E-33 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Pfam PF00009 Elongation factor Tu GTP binding domain 5 183 1.5E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Gene3D G3DSA:3.40.50.300 1 187 3.9E-72 T 11-10-2018 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 SUPERFAMILY SSF54980 294 372 3.6E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 SUPERFAMILY SSF52540 1 207 3.64E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 307.088 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Gene3D G3DSA:3.30.70.3380 370 480 1.2E-41 T 11-10-2018 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 3.7E-49 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Gene3D G3DSA:2.40.30.10 188 287 7.9E-36 T 11-10-2018 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Pfam PF03144 Elongation factor Tu domain 2 207 277 2.7E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 PRINTS PR00315 GTP-binding elongation factor signature 8 21 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 PRINTS PR00315 GTP-binding elongation factor signature 92 103 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 PRINTS PR00315 GTP-binding elongation factor signature 128 137 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 PRINTS PR00315 GTP-binding elongation factor signature 51 59 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 PRINTS PR00315 GTP-binding elongation factor signature 76 86 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 TIGRFAM TIGR01393 lepA: elongation factor 4 5 596 6.8E-302 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 Pfam PF00679 Elongation factor G C-terminus 401 485 2.9E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 SUPERFAMILY SSF50447 167 290 2.06E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 SMART SM00838 400 488 0.0058 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 SUPERFAMILY SSF54980 401 495 3.41E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_13430 0a441d678a5339b88a5c56c9d326ff48 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 178 8.3E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00097 Anthranilate synthase component II signature 8 22 9.5E-34 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00097 Anthranilate synthase component II signature 59 68 9.5E-34 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00097 Anthranilate synthase component II signature 111 119 9.5E-34 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00097 Anthranilate synthase component II signature 178 191 9.5E-34 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00097 Anthranilate synthase component II signature 131 143 9.5E-34 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00097 Anthranilate synthase component II signature 86 97 9.5E-34 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 Gene3D G3DSA:3.40.50.880 7 202 2.8E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 86 102 9.9E-5 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 56 70 9.9E-5 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00096 Glutamine amidotransferase superfamily signature 59 68 1.1E-13 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00096 Glutamine amidotransferase superfamily signature 178 191 1.1E-13 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 PRINTS PR00096 Glutamine amidotransferase superfamily signature 86 97 1.1E-13 T 11-10-2018 AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 Pfam PF00117 Glutamine amidotransferase class-I 10 198 4.7E-43 T 11-10-2018 IPR017926 Glutamine amidotransferase AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 SUPERFAMILY SSF52317 8 201 7.07E-42 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_07280 65baf740bfe2d02457f932f2f28de1a0 210 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 8 198 4.1E-49 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.0E-13 T 11-10-2018 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.0E-13 T 11-10-2018 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 2.0E-13 T 11-10-2018 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 190 1.4E-76 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.7E-35 T 11-10-2018 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.7E-35 T 11-10-2018 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.7E-35 T 11-10-2018 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 5.7E-35 T 11-10-2018 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.7E-35 T 11-10-2018 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.7E-35 T 11-10-2018 AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 2.9E-52 T 11-10-2018 IPR017926 Glutamine amidotransferase AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 SUPERFAMILY SSF52317 2 190 3.06E-51 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_01870 a22ec853386cfa8a3f8b84e0dc126242 191 Gene3D G3DSA:3.40.50.880 1 190 1.2E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 Gene3D G3DSA:3.40.1550.10 43 230 1.1E-54 T 11-10-2018 IPR028976 CheC-like superfamily AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 8.4E-21 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 8.4E-21 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 8.4E-21 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 8.4E-21 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 7.1E-16 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 SUPERFAMILY SSF101801 247 322 7.19E-14 T 11-10-2018 IPR036429 SpoA-like superfamily AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 SUPERFAMILY SSF103039 4 230 5.75E-19 T 11-10-2018 IPR028976 CheC-like superfamily AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.4E-80 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 PIRSF PIRSF002888 1 328 7.5E-93 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AVL55_05155 2dd60f6060f290859d332df73a7ee6ad 352 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 8.4E-115 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AVL55_16240 1eb452d56f8fc00908674283d53c3d35 677 SUPERFAMILY SSF52540 216 382 1.46E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16240 1eb452d56f8fc00908674283d53c3d35 677 SMART SM00382 228 362 2.8E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_16240 1eb452d56f8fc00908674283d53c3d35 677 SMART SM00382 470 599 3.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_16240 1eb452d56f8fc00908674283d53c3d35 677 Gene3D G3DSA:3.40.50.300 181 374 2.9E-20 T 11-10-2018 AVL55_16240 1eb452d56f8fc00908674283d53c3d35 677 SUPERFAMILY SSF52540 464 633 1.03E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16240 1eb452d56f8fc00908674283d53c3d35 677 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 232 245 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AVL55_16240 1eb452d56f8fc00908674283d53c3d35 677 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 475 595 6.9E-28 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_16240 1eb452d56f8fc00908674283d53c3d35 677 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 232 359 8.6E-9 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_16240 1eb452d56f8fc00908674283d53c3d35 677 Gene3D G3DSA:3.40.50.300 437 616 2.1E-36 T 11-10-2018 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 SUPERFAMILY SSF53671 2 302 5.89E-88 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 141 8.4E-42 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 301 1.7E-94 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 298 4.7E-45 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 Gene3D G3DSA:3.40.50.1370 9 297 1.8E-98 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 117 131 4.7E-21 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 44 58 4.7E-21 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 4.7E-21 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 77 90 4.7E-21 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 4.7E-21 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 Gene3D G3DSA:3.40.50.1370 131 288 1.8E-98 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 1.4E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 1.4E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 1.4E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AVL55_02000 c47c5617c85317335d1f1190a9e28db7 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 1.4E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AVL55_09815 45b3ba5b95198bc04fa5184f349912f7 275 Pfam PF00072 Response regulator receiver domain 9 118 2.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_09815 45b3ba5b95198bc04fa5184f349912f7 275 Gene3D G3DSA:3.40.50.2300 1 139 4.5E-36 T 11-10-2018 AVL55_09815 45b3ba5b95198bc04fa5184f349912f7 275 Gene3D G3DSA:2.40.50.40 168 237 4.1E-13 T 11-10-2018 AVL55_09815 45b3ba5b95198bc04fa5184f349912f7 275 SMART SM00448 6 118 3.1E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_09815 45b3ba5b95198bc04fa5184f349912f7 275 SUPERFAMILY SSF52172 8 138 5.98E-34 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_09815 45b3ba5b95198bc04fa5184f349912f7 275 SMART SM00850 177 274 6.2E-32 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AVL55_09815 45b3ba5b95198bc04fa5184f349912f7 275 Pfam PF04397 LytTr DNA-binding domain 178 273 1.1E-22 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AVL55_04435 5807fe57cce55eb72f1085f0181c7a41 543 Pfam PF00117 Glutamine amidotransferase class-I 300 533 1.9E-60 T 11-10-2018 IPR017926 Glutamine amidotransferase AVL55_04435 5807fe57cce55eb72f1085f0181c7a41 543 SUPERFAMILY SSF52317 288 541 2.07E-87 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_04435 5807fe57cce55eb72f1085f0181c7a41 543 Pfam PF06418 CTP synthase N-terminus 4 265 2.3E-123 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AVL55_04435 5807fe57cce55eb72f1085f0181c7a41 543 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.215 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AVL55_04435 5807fe57cce55eb72f1085f0181c7a41 543 Gene3D G3DSA:3.40.50.300 1 284 1.6E-131 T 11-10-2018 AVL55_04435 5807fe57cce55eb72f1085f0181c7a41 543 Gene3D G3DSA:3.40.50.880 285 543 1.1E-105 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_04435 5807fe57cce55eb72f1085f0181c7a41 543 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 2.0E-257 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AVL55_04435 5807fe57cce55eb72f1085f0181c7a41 543 SUPERFAMILY SSF52540 1 268 1.06E-119 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 Pfam PF06490 Flagellar regulatory protein FleQ 4 108 8.2E-24 T 11-10-2018 IPR010518 Flagellar regulatory FleQ AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 Gene3D G3DSA:3.40.50.300 121 301 4.6E-67 T 11-10-2018 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 SUPERFAMILY SSF52540 130 372 4.09E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 Gene3D G3DSA:1.10.10.60 411 484 7.9E-14 T 11-10-2018 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 Gene3D G3DSA:1.10.8.60 302 377 4.3E-22 T 11-10-2018 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 Pfam PF00158 Sigma-54 interaction domain 130 296 1.3E-73 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 SMART SM00382 150 294 1.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 Pfam PF02954 Bacterial regulatory protein, Fis family 439 479 9.7E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 Gene3D G3DSA:3.40.50.2300 1 120 1.4E-6 T 11-10-2018 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 SUPERFAMILY SSF52172 1 174 1.27E-8 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 SUPERFAMILY SSF46689 342 481 2.6E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 462 482 2.7E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_05100 060b2e9831b0e4b91853b7dea89e5d8a 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 462 2.7E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_16465 549ae61c3a34c2d47ee6503e63575188 342 Pfam PF16220 Domain of unknown function (DUF4880) 18 59 5.2E-7 T 11-10-2018 IPR032623 FecR, N-terminal AVL55_16465 549ae61c3a34c2d47ee6503e63575188 342 Pfam PF04773 FecR protein 132 225 2.1E-19 T 11-10-2018 IPR006860 FecR protein AVL55_16465 549ae61c3a34c2d47ee6503e63575188 342 Gene3D G3DSA:2.60.120.1440 112 256 1.3E-25 T 11-10-2018 AVL55_16465 549ae61c3a34c2d47ee6503e63575188 342 PIRSF PIRSF018266 9 342 2.7E-53 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 Gene3D G3DSA:3.20.20.80 449 1010 6.3E-186 T 11-10-2018 AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 Gene3D G3DSA:2.60.40.1180 1015 1091 4.7E-17 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 SUPERFAMILY SSF49452 72 209 1.54E-31 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 Gene3D G3DSA:2.60.40.1110 76 210 5.7E-29 T 11-10-2018 AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 350 434 8.0E-13 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 SUPERFAMILY SSF81296 213 337 1.26E-27 T 11-10-2018 IPR014756 Immunoglobulin E-set AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 Gene3D G3DSA:2.60.40.10 342 448 1.7E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 SUPERFAMILY SSF51445 447 975 6.6E-112 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 Pfam PF11852 Domain of unknown function (DUF3372) 916 1089 1.4E-56 T 11-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 SUPERFAMILY SSF51011 978 1100 9.35E-31 T 11-10-2018 AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 Gene3D G3DSA:2.60.40.1130 223 336 1.2E-25 T 11-10-2018 AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 Pfam PF03714 Bacterial pullanase-associated domain 92 180 2.4E-10 T 11-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AVL55_09635 8516d11acc697948e513ac6ff397ecba 1443 SUPERFAMILY SSF81296 348 452 4.9E-20 T 11-10-2018 IPR014756 Immunoglobulin E-set AVL55_09190 87505824d47930342c284aece8eb36ca 223 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 34 188 1.3E-68 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AVL55_09190 87505824d47930342c284aece8eb36ca 223 SUPERFAMILY SSF55681 11 212 1.74E-66 T 11-10-2018 AVL55_09190 87505824d47930342c284aece8eb36ca 223 Pfam PF03099 Biotin/lipoate A/B protein ligase family 69 166 2.0E-5 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AVL55_09190 87505824d47930342c284aece8eb36ca 223 PIRSF PIRSF016262 9 223 1.3E-57 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AVL55_09190 87505824d47930342c284aece8eb36ca 223 Gene3D G3DSA:3.30.930.10 7 211 5.5E-59 T 11-10-2018 AVL55_09190 87505824d47930342c284aece8eb36ca 223 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 78 93 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AVL55_09190 87505824d47930342c284aece8eb36ca 223 Hamap MF_00013 Octanoyltransferase [lipB]. 12 213 36.139 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AVL55_09190 87505824d47930342c284aece8eb36ca 223 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 82 135 1.0E-15 T 11-10-2018 AVL55_05500 c81553405a807ee57995bce40d92660a 754 Gene3D G3DSA:3.40.50.12320 219 392 1.5E-29 T 11-10-2018 AVL55_05500 c81553405a807ee57995bce40d92660a 754 SUPERFAMILY SSF55729 429 590 4.66E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_05500 c81553405a807ee57995bce40d92660a 754 Pfam PF05127 Helicase 223 401 4.2E-37 T 11-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AVL55_05500 c81553405a807ee57995bce40d92660a 754 Pfam PF08351 Domain of unknown function (DUF1726) 84 167 1.0E-8 T 11-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 AVL55_05500 c81553405a807ee57995bce40d92660a 754 SUPERFAMILY SSF52540 195 348 2.09E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05500 c81553405a807ee57995bce40d92660a 754 Pfam PF13718 GNAT acetyltransferase 2 442 561 7.0E-11 T 11-10-2018 IPR000182 GNAT domain AVL55_05500 c81553405a807ee57995bce40d92660a 754 Gene3D G3DSA:3.40.630.30 408 608 2.0E-50 T 11-10-2018 AVL55_05500 c81553405a807ee57995bce40d92660a 754 Gene3D G3DSA:3.40.50.11040 27 208 5.1E-19 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 Gene3D G3DSA:1.10.246.130 233 337 2.8E-13 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 120 139 6.4E-20 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 337 355 6.4E-20 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 361 379 6.4E-20 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 407 6.4E-20 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 29 54 6.4E-20 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 217 233 6.4E-20 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 265 6.4E-20 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 Pfam PF01019 Gamma-glutamyltranspeptidase 22 518 5.8E-119 T 11-10-2018 AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 SUPERFAMILY SSF56235 6 521 3.67E-139 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_08045 6851d7b3df32f473d624b211ff177cf8 525 Gene3D G3DSA:3.60.20.40 338 521 3.8E-57 T 11-10-2018 AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 PIRSF PIRSF036893 1 180 8.7E-45 T 11-10-2018 IPR022271 Lipocalin, ApoD type AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 11-10-2018 IPR022272 Lipocalin family conserved site AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 Pfam PF08212 Lipocalin-like domain 35 174 5.1E-46 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 PRINTS PR01171 Bacterial lipocalin signature 34 48 3.5E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 PRINTS PR01171 Bacterial lipocalin signature 70 79 3.5E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 PRINTS PR01171 Bacterial lipocalin signature 121 129 3.5E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 PRINTS PR01171 Bacterial lipocalin signature 104 118 3.5E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 PRINTS PR01171 Bacterial lipocalin signature 137 148 3.5E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 PRINTS PR01171 Bacterial lipocalin signature 51 67 3.5E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 PRINTS PR01171 Bacterial lipocalin signature 164 174 3.5E-38 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 Gene3D G3DSA:2.40.128.20 13 176 3.7E-51 T 11-10-2018 IPR012674 Calycin AVL55_18330 eb1f2390a659f470fbce8e28bf042384 180 SUPERFAMILY SSF50814 15 177 2.4E-49 T 11-10-2018 IPR012674 Calycin AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 10 361 6.3E-165 T 11-10-2018 IPR014317 Transcription activator PspF AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 SUPERFAMILY SSF52540 10 248 7.19E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 Pfam PF00158 Sigma-54 interaction domain 11 173 6.6E-59 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 Gene3D G3DSA:1.10.10.60 301 364 1.6E-8 T 11-10-2018 AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 Gene3D G3DSA:1.10.8.60 182 265 8.1E-26 T 11-10-2018 AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 SUPERFAMILY SSF46689 224 363 1.18E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 Gene3D G3DSA:3.40.50.300 1 181 7.2E-58 T 11-10-2018 AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 96 111 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 Pfam PF02954 Bacterial regulatory protein, Fis family 327 361 1.6E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_05395 bd7c67ee00cbb74b6370c190c4577897 373 SMART SM00382 30 177 5.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 SUPERFAMILY SSF46689 14 97 2.82E-23 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 Gene3D G3DSA:1.10.10.60 1 97 2.8E-29 T 11-10-2018 AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 PIRSF PIRSF002097 1 97 4.4E-39 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 Pfam PF02954 Bacterial regulatory protein, Fis family 54 94 8.8E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 60 77 1.7E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 77 97 1.7E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 8 25 3.7E-16 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 41 56 3.7E-16 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 56 68 3.7E-16 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AVL55_19250 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 25 41 3.7E-16 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AVL55_09275 3adf29460f0c3796fb70a5425694edc3 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 5.3E-35 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AVL55_09275 3adf29460f0c3796fb70a5425694edc3 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 4.0E-35 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AVL55_09275 3adf29460f0c3796fb70a5425694edc3 97 Gene3D G3DSA:3.30.110.60 1 97 1.3E-34 T 11-10-2018 IPR035920 YhbY-like superfamily AVL55_09275 3adf29460f0c3796fb70a5425694edc3 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.6E-21 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AVL55_09275 3adf29460f0c3796fb70a5425694edc3 97 SUPERFAMILY SSF75471 1 95 4.19E-30 T 11-10-2018 IPR035920 YhbY-like superfamily AVL55_09275 3adf29460f0c3796fb70a5425694edc3 97 SMART SM01103 3 86 3.1E-42 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 SUPERFAMILY SSF52540 37 580 7.02E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 SUPERFAMILY SSF52540 5 415 4.26E-139 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 SMART SM00490 460 546 7.0E-20 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 Pfam PF00271 Helicase conserved C-terminal domain 437 545 9.4E-18 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 Gene3D G3DSA:4.10.860.10 626 671 2.8E-12 T 11-10-2018 AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 Gene3D G3DSA:3.40.50.300 415 590 2.2E-50 T 11-10-2018 AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 Pfam PF02151 UvrB/uvrC motif 633 666 2.6E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 SMART SM00487 9 425 1.5E-25 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 2.4E-20 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 Gene3D G3DSA:3.40.50.300 1 243 1.3E-77 T 11-10-2018 AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 Pfam PF04851 Type III restriction enzyme, res subunit 13 121 3.6E-9 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 43.804 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 SUPERFAMILY SSF46600 624 667 1.7E-10 T 11-10-2018 IPR036876 UVR domain superfamily AVL55_06455 36765699f06298e2f6f55779f2f1fbf0 671 Gene3D G3DSA:3.40.50.300 266 414 4.7E-52 T 11-10-2018 AVL55_10850 5aee45109dff91c63a2b1c97828a8b91 190 PIRSF PIRSF000847 1 190 4.1E-43 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AVL55_10850 5aee45109dff91c63a2b1c97828a8b91 190 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AVL55_10850 5aee45109dff91c63a2b1c97828a8b91 190 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 183 4.9E-48 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AVL55_10850 5aee45109dff91c63a2b1c97828a8b91 190 Gene3D G3DSA:1.20.120.1760 2 182 2.7E-17 T 11-10-2018 AVL55_10850 5aee45109dff91c63a2b1c97828a8b91 190 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 70 1.5E-16 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AVL55_08590 51722704d63ef6a689e72ffa149d8d3d 279 Pfam PF01457 Leishmanolysin 104 233 8.6E-6 T 11-10-2018 IPR001577 Peptidase M8, leishmanolysin GO:0004222|GO:0006508|GO:0007155|GO:0016020 AVL55_08590 51722704d63ef6a689e72ffa149d8d3d 279 SUPERFAMILY SSF55486 93 231 9.23E-22 T 11-10-2018 AVL55_02535 7d81526ea9e184d949a67147a5d15821 443 Gene3D G3DSA:3.40.350.10 1 157 2.8E-67 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AVL55_02535 7d81526ea9e184d949a67147a5d15821 443 Gene3D G3DSA:3.90.230.10 159 442 2.5E-82 T 11-10-2018 AVL55_02535 7d81526ea9e184d949a67147a5d15821 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AVL55_02535 7d81526ea9e184d949a67147a5d15821 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 59.36 T 11-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 AVL55_02535 7d81526ea9e184d949a67147a5d15821 443 Pfam PF00557 Metallopeptidase family M24 166 429 2.1E-47 T 11-10-2018 IPR000994 Peptidase M24 AVL55_02535 7d81526ea9e184d949a67147a5d15821 443 SUPERFAMILY SSF55920 161 438 4.97E-58 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 PRINTS PR00471 Acetate kinase family signature 199 220 9.3E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 PRINTS PR00471 Acetate kinase family signature 169 182 9.3E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 PRINTS PR00471 Acetate kinase family signature 5 16 9.3E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 PRINTS PR00471 Acetate kinase family signature 318 334 9.3E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 PRINTS PR00471 Acetate kinase family signature 374 386 9.3E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 PRINTS PR00471 Acetate kinase family signature 296 309 9.3E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 Pfam PF00871 Acetokinase family 5 386 6.1E-139 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 Gene3D G3DSA:3.30.420.40 2 191 6.9E-64 T 11-10-2018 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 PIRSF PIRSF000722 1 393 4.1E-132 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 SUPERFAMILY SSF53067 4 191 1.44E-59 T 11-10-2018 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 TIGRFAM TIGR00016 ackA: acetate kinase 2 390 5.2E-142 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 SUPERFAMILY SSF53067 154 390 7.87E-80 T 11-10-2018 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 Gene3D G3DSA:3.30.420.40 194 393 1.0E-72 T 11-10-2018 AVL55_07485 0d4c77564bb7856fb023a4c3f0d51b06 393 Hamap MF_00020 Acetate kinase [ackA]. 1 393 167.56 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AVL55_18055 4fab461963d2b1c261fbc500c803c22e 563 Pfam PF02554 Carbon starvation protein CstA 1 361 1.0E-115 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AVL55_18055 4fab461963d2b1c261fbc500c803c22e 563 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 389 509 1.1E-32 T 11-10-2018 IPR025299 CstA, C-terminal domain AVL55_13035 d68fc1b1f099e88e3232bf321ca6bbf4 245 SUPERFAMILY SSF51366 1 242 8.07E-67 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AVL55_13035 d68fc1b1f099e88e3232bf321ca6bbf4 245 Gene3D G3DSA:3.20.20.70 1 245 1.7E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_13035 d68fc1b1f099e88e3232bf321ca6bbf4 245 Pfam PF00977 Histidine biosynthesis protein 1 234 4.1E-77 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AVL55_13035 d68fc1b1f099e88e3232bf321ca6bbf4 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.176 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AVL55_13035 d68fc1b1f099e88e3232bf321ca6bbf4 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 6.1E-79 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AVL55_02570 f5b9187143c55f4de94146dd4d17f1a3 165 Gene3D G3DSA:1.20.120.400 21 145 3.7E-42 T 11-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 AVL55_02570 f5b9187143c55f4de94146dd4d17f1a3 165 TIGRFAM TIGR02753 sodN: superoxide dismutase, Ni 1 144 1.6E-53 T 11-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 AVL55_02570 f5b9187143c55f4de94146dd4d17f1a3 165 Pfam PF09055 Nickel-containing superoxide dismutase 17 143 1.3E-48 T 11-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 AVL55_02570 f5b9187143c55f4de94146dd4d17f1a3 165 SUPERFAMILY SSF109770 21 144 8.24E-41 T 11-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 AVL55_16840 27056a5eba21efc89f78d4350552df0d 445 Pfam PF00924 Mechanosensitive ion channel 156 405 3.9E-42 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_16840 27056a5eba21efc89f78d4350552df0d 445 SUPERFAMILY SSF50182 193 260 3.6E-11 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_19640 c4cb23d4c20bc7a6cc108c65d5aa2fe0 616 Gene3D G3DSA:3.50.30.80 421 572 6.6E-53 T 11-10-2018 AVL55_19640 c4cb23d4c20bc7a6cc108c65d5aa2fe0 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 609 45.127 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_19640 c4cb23d4c20bc7a6cc108c65d5aa2fe0 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_19640 c4cb23d4c20bc7a6cc108c65d5aa2fe0 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 609 3.2E-258 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_19640 c4cb23d4c20bc7a6cc108c65d5aa2fe0 616 Pfam PF00920 Dehydratase family 34 606 1.9E-219 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_19640 c4cb23d4c20bc7a6cc108c65d5aa2fe0 616 SUPERFAMILY SSF143975 3 420 8.89E-136 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_19640 c4cb23d4c20bc7a6cc108c65d5aa2fe0 616 SUPERFAMILY SSF52016 421 611 3.3E-59 T 11-10-2018 AVL55_19640 c4cb23d4c20bc7a6cc108c65d5aa2fe0 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_08135 883bb6cd8038db07bab2e383651ff80b 246 SUPERFAMILY SSF89550 2 215 3.33E-13 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AVL55_08135 883bb6cd8038db07bab2e383651ff80b 246 Gene3D G3DSA:3.20.20.140 1 245 2.9E-71 T 11-10-2018 AVL55_08135 883bb6cd8038db07bab2e383651ff80b 246 PIRSF PIRSF016557 1 243 1.2E-61 T 11-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 AVL55_08965 3efc074b80c95d6b3640fff74917ac40 248 SUPERFAMILY SSF55073 40 123 4.91E-6 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_08965 3efc074b80c95d6b3640fff74917ac40 248 Gene3D G3DSA:3.30.70.1230 2 136 1.5E-8 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_15615 a78cf75b1bdb1aa4f56adcf69300472d 81 Pfam PF14110 Domain of unknown function (DUF4282) 5 78 3.4E-13 T 11-10-2018 IPR025557 Protein of unknown function DUF4282 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 SUPERFAMILY SSF82693 50 143 1.7E-22 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 6.0E-65 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 6.0E-65 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 6.0E-65 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 6.0E-65 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 6.0E-65 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.0E-65 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 6.0E-65 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 6.0E-65 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 6.0E-65 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 Gene3D G3DSA:3.30.2090.10 707 795 9.7E-276 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 SUPERFAMILY SSF82714 193 270 1.96E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 Gene3D G3DSA:3.30.2090.10 188 274 9.7E-276 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 Gene3D G3DSA:3.30.70.1320 142 330 9.7E-276 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 SUPERFAMILY SSF82693 146 326 1.78E-14 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 Pfam PF00873 AcrB/AcrD/AcrF family 15 1012 8.5E-256 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 Gene3D G3DSA:3.30.70.1440 657 852 9.7E-276 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 Gene3D G3DSA:1.20.1640.10 507 1009 9.7E-276 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 SUPERFAMILY SSF82866 296 493 4.71E-42 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 Gene3D G3DSA:3.30.70.1430 50 803 9.7E-276 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 SUPERFAMILY SSF82714 708 790 4.58E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 SUPERFAMILY SSF82866 816 1016 6.15E-45 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 SUPERFAMILY SSF82693 559 651 1.52E-16 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 Gene3D G3DSA:1.20.1640.10 20 506 9.7E-276 T 11-10-2018 AVL55_06665 be629b80f28de3869f29d5b23690d309 1038 Gene3D G3DSA:3.30.70.1430 561 656 9.7E-276 T 11-10-2018 AVL55_12860 4cbd60666642e44c1f4bdd723d0a39ff 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 510 3.7E-260 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AVL55_12860 4cbd60666642e44c1f4bdd723d0a39ff 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 510 2.2E-251 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AVL55_12860 4cbd60666642e44c1f4bdd723d0a39ff 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 350.083 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AVL55_09965 358f4b590aa4ef4a29b291148e6276e0 294 Gene3D G3DSA:1.10.10.10 3 93 1.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_09965 358f4b590aa4ef4a29b291148e6276e0 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.1E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_09965 358f4b590aa4ef4a29b291148e6276e0 294 Gene3D G3DSA:3.40.190.290 94 293 9.6E-37 T 11-10-2018 AVL55_09965 358f4b590aa4ef4a29b291148e6276e0 294 Pfam PF03466 LysR substrate binding domain 92 292 8.2E-32 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_09965 358f4b590aa4ef4a29b291148e6276e0 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_09965 358f4b590aa4ef4a29b291148e6276e0 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_09965 358f4b590aa4ef4a29b291148e6276e0 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_09965 358f4b590aa4ef4a29b291148e6276e0 294 SUPERFAMILY SSF53850 92 293 8.38E-33 T 11-10-2018 AVL55_09965 358f4b590aa4ef4a29b291148e6276e0 294 SUPERFAMILY SSF46785 4 112 8.86E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 Gene3D G3DSA:2.40.110.10 120 231 1.3E-40 T 11-10-2018 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 Gene3D G3DSA:1.20.140.10 232 383 2.7E-55 T 11-10-2018 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.5E-48 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 SUPERFAMILY SSF56645 1 240 1.44E-77 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 SUPERFAMILY SSF47203 225 379 4.19E-61 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 Gene3D G3DSA:1.10.540.10 1 119 5.7E-35 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 5.8E-28 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 4.8E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 PIRSF PIRSF016578 208 383 1.0E-12 T 11-10-2018 AVL55_09750 1ab5d2d6cc93a4094fffbd92ddba0bd2 384 PIRSF PIRSF016578 5 192 2.0E-13 T 11-10-2018 AVL55_18875 3bcf180dfcf4706997614492646d1966 452 Gene3D G3DSA:2.40.160.60 26 452 6.9E-124 T 11-10-2018 AVL55_18875 3bcf180dfcf4706997614492646d1966 452 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 452 1.1E-111 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AVL55_18875 3bcf180dfcf4706997614492646d1966 452 SUPERFAMILY SSF56935 26 452 2.06E-91 T 11-10-2018 AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 SMART SM00448 179 300 1.8E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 SUPERFAMILY SSF50341 16 157 1.26E-35 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 SUPERFAMILY SSF52172 177 304 1.71E-25 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 Gene3D G3DSA:2.30.30.40 24 147 1.2E-27 T 11-10-2018 AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 Gene3D G3DSA:3.40.50.2300 167 308 8.8E-26 T 11-10-2018 AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 Pfam PF00072 Response regulator receiver domain 181 300 1.0E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 Gene3D G3DSA:2.40.50.180 39 153 1.2E-27 T 11-10-2018 AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 Pfam PF01584 CheW-like domain 21 155 2.5E-34 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 PIRSF PIRSF002867 1 307 1.8E-106 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AVL55_04840 f0cddd2a4689f0952c25a15d3998eb7e 309 SMART SM00260 17 153 2.2E-22 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 4.7E-49 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 SUPERFAMILY SSF52954 466 570 1.96E-30 T 11-10-2018 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 SUPERFAMILY SSF55681 10 481 1.08E-107 T 11-10-2018 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 SUPERFAMILY SSF55826 218 388 6.02E-10 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 3.7E-232 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 Gene3D G3DSA:3.30.930.10 11 468 1.2E-220 T 11-10-2018 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 572 39.105 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 Gene3D G3DSA:3.40.50.800 4 557 1.2E-220 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 Gene3D G3DSA:3.90.960.10 240 392 1.2E-220 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 Pfam PF04073 Aminoacyl-tRNA editing domain 261 381 4.0E-6 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 Pfam PF03129 Anticodon binding domain 478 571 1.3E-20 T 11-10-2018 IPR004154 Anticodon-binding AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.3E-20 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.3E-20 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.3E-20 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AVL55_13700 db7f050af1dd489f5a19c6f2215a3a26 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.3E-20 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AVL55_03430 423f16dce0e641151699c84756b9edb5 223 Gene3D G3DSA:1.20.910.10 3 219 4.4E-60 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AVL55_03430 423f16dce0e641151699c84756b9edb5 223 Pfam PF14518 Iron-containing redox enzyme 39 206 1.3E-27 T 11-10-2018 AVL55_03430 423f16dce0e641151699c84756b9edb5 223 SMART SM01236 73 170 3.9E-8 T 11-10-2018 AVL55_03430 423f16dce0e641151699c84756b9edb5 223 SUPERFAMILY SSF48613 1 214 1.09E-65 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 SUPERFAMILY SSF48452 200 369 2.94E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 SMART SM00028 336 369 0.026 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 SMART SM00028 234 267 0.017 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 SMART SM00028 268 301 370.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 SMART SM00028 200 233 21.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 SMART SM00028 302 335 2.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 Pfam PF14559 Tetratricopeptide repeat 312 380 5.8E-8 T 11-10-2018 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 Gene3D G3DSA:1.25.40.10 290 385 4.3E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 Gene3D G3DSA:1.25.40.10 182 289 3.2E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_17140 8bf07e5f86e5ead065bf8246f82f8ade 385 Pfam PF13181 Tetratricopeptide repeat 235 267 0.0022 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 Gene3D G3DSA:2.30.33.40 1 96 7.3E-37 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.4E-28 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-28 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-28 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.4E-28 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 SMART SM00883 2 95 1.2E-49 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 SUPERFAMILY SSF50129 1 96 6.71E-31 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.515 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AVL55_19150 ca04d43f03550e12557e0c97657c3313 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 2.0E-30 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AVL55_02975 93b47beeb2bfc89b77756f050b250558 328 Gene3D G3DSA:3.40.1030.10 74 325 4.2E-48 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_02975 93b47beeb2bfc89b77756f050b250558 328 SUPERFAMILY SSF47648 10 73 2.88E-15 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_02975 93b47beeb2bfc89b77756f050b250558 328 Pfam PF00591 Glycosyl transferase family, a/b domain 132 253 5.5E-5 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_02975 93b47beeb2bfc89b77756f050b250558 328 SUPERFAMILY SSF52418 80 322 1.16E-47 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_02975 93b47beeb2bfc89b77756f050b250558 328 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 70 8.5E-15 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_02975 93b47beeb2bfc89b77756f050b250558 328 Gene3D G3DSA:1.20.970.10 4 73 2.8E-21 T 11-10-2018 AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 SUPERFAMILY SSF52540 101 617 1.11E-108 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 SMART SM00487 98 283 2.7E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 Gene3D G3DSA:3.40.50.300 47 276 2.6E-76 T 11-10-2018 AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 Gene3D G3DSA:3.40.50.300 277 442 8.6E-58 T 11-10-2018 AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 Pfam PF00270 DEAD/DEAH box helicase 112 257 5.0E-7 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 Gene3D G3DSA:1.20.120.1080 471 580 2.3E-14 T 11-10-2018 AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 65 1327 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 Pfam PF11898 Domain of unknown function (DUF3418) 739 1328 4.6E-201 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 SMART SM00382 116 408 1.6E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 Pfam PF00271 Helicase conserved C-terminal domain 304 425 2.0E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 SMART SM00847 486 587 3.4E-30 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 Pfam PF04408 Helicase associated domain (HA2) 489 584 5.0E-15 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 SMART SM00490 326 426 6.2E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_08495 acf6bee5264b4ec5e287db4f8fc7b79c 1331 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 650 725 6.9E-19 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 AVL55_07620 b278f6d48ba0075e6e99048a0bde9e1f 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AVL55_07620 b278f6d48ba0075e6e99048a0bde9e1f 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 203 313 1.6E-31 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AVL55_07620 b278f6d48ba0075e6e99048a0bde9e1f 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 9.8E-51 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AVL55_07620 b278f6d48ba0075e6e99048a0bde9e1f 315 Gene3D G3DSA:3.40.50.2020 148 290 1.0E-133 T 11-10-2018 AVL55_07620 b278f6d48ba0075e6e99048a0bde9e1f 315 Gene3D G3DSA:3.40.50.2020 7 302 1.0E-133 T 11-10-2018 AVL55_07620 b278f6d48ba0075e6e99048a0bde9e1f 315 SUPERFAMILY SSF53271 69 306 5.7E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AVL55_07620 b278f6d48ba0075e6e99048a0bde9e1f 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.2E-123 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AVL55_07620 b278f6d48ba0075e6e99048a0bde9e1f 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.07 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AVL55_07620 b278f6d48ba0075e6e99048a0bde9e1f 315 SMART SM01400 4 121 2.2E-78 T 11-10-2018 AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 Gene3D G3DSA:1.10.10.10 4 89 9.1E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 SUPERFAMILY SSF46785 2 84 2.58E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 SUPERFAMILY SSF53850 84 267 1.0E-26 T 11-10-2018 AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 Gene3D G3DSA:3.40.190.10 163 254 2.2E-42 T 11-10-2018 AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 Pfam PF03466 LysR substrate binding domain 89 238 8.7E-26 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_14990 8dacd8551e2142bffbd5c46bc578cc5d 282 Gene3D G3DSA:3.40.190.10 96 260 2.2E-42 T 11-10-2018 AVL55_01745 3e512b1bb6a385eda46ebb96f701c7a6 415 ProSitePatterns PS01219 Ammonium transporters signature. 168 193 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AVL55_01745 3e512b1bb6a385eda46ebb96f701c7a6 415 Pfam PF00909 Ammonium Transporter Family 16 407 3.6E-97 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AVL55_01745 3e512b1bb6a385eda46ebb96f701c7a6 415 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 9 410 1.4E-200 T 11-10-2018 IPR019879 Ammonium transporter, marine subtype AVL55_01745 3e512b1bb6a385eda46ebb96f701c7a6 415 SUPERFAMILY SSF111352 10 388 2.62E-100 T 11-10-2018 AVL55_01745 3e512b1bb6a385eda46ebb96f701c7a6 415 Gene3D G3DSA:1.10.3430.10 4 414 5.5E-119 T 11-10-2018 IPR029020 Ammonium/urea transporter AVL55_01215 a68ec5317819005935560a40fd7ad88f 188 Pfam PF00239 Resolvase, N terminal domain 5 140 1.7E-44 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AVL55_01215 a68ec5317819005935560a40fd7ad88f 188 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AVL55_01215 a68ec5317819005935560a40fd7ad88f 188 SUPERFAMILY SSF53041 4 140 1.83E-43 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AVL55_01215 a68ec5317819005935560a40fd7ad88f 188 Gene3D G3DSA:3.40.50.1390 3 130 4.0E-45 T 11-10-2018 AVL55_01215 a68ec5317819005935560a40fd7ad88f 188 ProSitePatterns PS00398 Site-specific recombinases signature 2. 59 71 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AVL55_01215 a68ec5317819005935560a40fd7ad88f 188 SMART SM00857 4 141 3.0E-55 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AVL55_01215 a68ec5317819005935560a40fd7ad88f 188 Pfam PF02796 Helix-turn-helix domain of resolvase 143 187 1.2E-5 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AVL55_06030 92df6928d72e5a62740745d2d21064b3 338 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 5 158 3.9E-42 T 11-10-2018 IPR017482 Putative phage-type endonuclease AVL55_06030 92df6928d72e5a62740745d2d21064b3 338 SUPERFAMILY SSF52980 1 199 9.12E-50 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AVL55_06030 92df6928d72e5a62740745d2d21064b3 338 Pfam PF09588 YqaJ-like viral recombinase domain 13 147 1.0E-20 T 11-10-2018 IPR019080 YqaJ viral recombinase AVL55_06030 92df6928d72e5a62740745d2d21064b3 338 Gene3D G3DSA:3.90.320.10 6 198 3.3E-35 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AVL55_14250 680c9aa89b7809379942b3479f36d6a6 240 SMART SM00382 26 217 3.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_14250 680c9aa89b7809379942b3479f36d6a6 240 Gene3D G3DSA:3.40.50.300 1 239 4.3E-62 T 11-10-2018 AVL55_14250 680c9aa89b7809379942b3479f36d6a6 240 TIGRFAM TIGR03864 PQQ_ABC_ATP: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system 3 234 6.2E-92 T 11-10-2018 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system AVL55_14250 680c9aa89b7809379942b3479f36d6a6 240 Pfam PF00005 ABC transporter 18 160 4.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_14250 680c9aa89b7809379942b3479f36d6a6 240 SUPERFAMILY SSF52540 3 224 4.69E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16355 feea7f27f17ef88fc5755f3e1162a034 362 Gene3D G3DSA:2.40.50.140 279 341 1.1E-7 T 11-10-2018 AVL55_16355 feea7f27f17ef88fc5755f3e1162a034 362 Gene3D G3DSA:3.40.50.300 1 239 4.8E-50 T 11-10-2018 AVL55_16355 feea7f27f17ef88fc5755f3e1162a034 362 SUPERFAMILY SSF50331 238 353 9.92E-17 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AVL55_16355 feea7f27f17ef88fc5755f3e1162a034 362 Gene3D G3DSA:2.40.50.100 241 350 1.1E-7 T 11-10-2018 AVL55_16355 feea7f27f17ef88fc5755f3e1162a034 362 Pfam PF00005 ABC transporter 20 162 4.3E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_16355 feea7f27f17ef88fc5755f3e1162a034 362 SUPERFAMILY SSF52540 3 242 3.25E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07090 0f8d01fcfa4390b2de83521669104310 231 Pfam PF00072 Response regulator receiver domain 5 114 9.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07090 0f8d01fcfa4390b2de83521669104310 231 SUPERFAMILY SSF52172 2 127 3.56E-37 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_07090 0f8d01fcfa4390b2de83521669104310 231 SMART SM00862 149 223 9.0E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_07090 0f8d01fcfa4390b2de83521669104310 231 Gene3D G3DSA:3.40.50.2300 1 124 1.9E-33 T 11-10-2018 AVL55_07090 0f8d01fcfa4390b2de83521669104310 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 2.2E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_07090 0f8d01fcfa4390b2de83521669104310 231 SUPERFAMILY SSF46894 127 224 5.67E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_07090 0f8d01fcfa4390b2de83521669104310 231 SMART SM00448 3 113 4.9E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07090 0f8d01fcfa4390b2de83521669104310 231 Gene3D G3DSA:1.10.10.10 125 226 7.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16495 181fc96cd3b0f5a637d0f1e14bb71e77 225 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16495 181fc96cd3b0f5a637d0f1e14bb71e77 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16495 181fc96cd3b0f5a637d0f1e14bb71e77 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16495 181fc96cd3b0f5a637d0f1e14bb71e77 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16495 181fc96cd3b0f5a637d0f1e14bb71e77 225 Gene3D G3DSA:3.40.50.2300 24 143 3.0E-19 T 11-10-2018 AVL55_16495 181fc96cd3b0f5a637d0f1e14bb71e77 225 Gene3D G3DSA:1.10.10.10 148 216 8.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16495 181fc96cd3b0f5a637d0f1e14bb71e77 225 SMART SM00421 156 213 7.5E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16495 181fc96cd3b0f5a637d0f1e14bb71e77 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 1.4E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16495 181fc96cd3b0f5a637d0f1e14bb71e77 225 SUPERFAMILY SSF46894 147 213 1.43E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_00515 472f0f420c7a4f79f77523586cde5459 264 SUPERFAMILY SSF69572 16 264 1.31E-59 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AVL55_00515 472f0f420c7a4f79f77523586cde5459 264 Gene3D G3DSA:3.40.50.720 19 264 3.6E-62 T 11-10-2018 AVL55_00515 472f0f420c7a4f79f77523586cde5459 264 Pfam PF00899 ThiF family 26 260 1.3E-42 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 SUPERFAMILY SSF51735 2 175 1.98E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 SMART SM00846 2 154 1.6E-74 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 3.7E-56 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 104 1.0E-35 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 336 64.783 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 327 6.5E-167 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 Gene3D G3DSA:3.30.360.10 153 317 8.5E-131 T 11-10-2018 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 PIRSF PIRSF000149 1 336 3.3E-128 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 SUPERFAMILY SSF55347 154 316 1.31E-59 T 11-10-2018 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 2.5E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 2.5E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 2.5E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 2.5E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 2.5E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03925 30b1b907d36775a9503475088b3f66e1 336 Gene3D G3DSA:3.40.50.720 4 327 8.5E-131 T 11-10-2018 AVL55_11700 cd50de424e4a7f41d78316dca4e21b9a 82 Pfam PF02597 ThiS family 5 82 4.2E-18 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AVL55_11700 cd50de424e4a7f41d78316dca4e21b9a 82 Gene3D G3DSA:3.10.20.30 2 82 2.1E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_11700 cd50de424e4a7f41d78316dca4e21b9a 82 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 3 82 3.6E-14 T 11-10-2018 IPR010038 MoaD, archaeal-type AVL55_11700 cd50de424e4a7f41d78316dca4e21b9a 82 SUPERFAMILY SSF54285 1 80 3.36E-19 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Pfam PF00575 S1 RNA binding domain 346 419 2.0E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Pfam PF00575 S1 RNA binding domain 190 245 6.5E-9 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Pfam PF00575 S1 RNA binding domain 260 332 7.2E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Pfam PF00575 S1 RNA binding domain 105 171 9.9E-9 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Pfam PF00575 S1 RNA binding domain 434 505 6.0E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Pfam PF00575 S1 RNA binding domain 19 86 1.8E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Gene3D G3DSA:2.40.50.140 6 97 2.3E-17 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SUPERFAMILY SSF50249 2 112 3.02E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SUPERFAMILY SSF50249 106 184 3.69E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SUPERFAMILY SSF50249 240 344 1.65E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SUPERFAMILY SSF50249 414 521 1.72E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_11015 017edb85693c51956065ba5165d14ae5 541 PIRSF PIRSF002111 1 519 7.4E-202 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Gene3D G3DSA:2.40.50.140 430 513 8.4E-19 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SUPERFAMILY SSF50249 189 262 1.24E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Gene3D G3DSA:2.40.50.140 178 220 2.2E-7 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Gene3D G3DSA:2.40.50.140 98 177 5.0E-6 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Gene3D G3DSA:2.40.50.140 343 429 7.7E-26 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Gene3D G3DSA:2.40.50.140 254 342 1.6E-30 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 Gene3D G3DSA:2.40.50.140 221 253 2.7E-7 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.7E-70 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.7E-70 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 PRINTS PR00681 Ribosomal protein S1 signature 315 333 6.7E-70 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.7E-70 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.7E-70 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.7E-70 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.7E-70 T 11-10-2018 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SUPERFAMILY SSF50249 327 425 6.86E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_11015 017edb85693c51956065ba5165d14ae5 541 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 505 1.5E-210 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SMART SM00316 19 87 6.9E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SMART SM00316 434 505 1.9E-16 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SMART SM00316 103 171 7.8E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SMART SM00316 190 245 1.3E-13 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SMART SM00316 347 419 2.7E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_11015 017edb85693c51956065ba5165d14ae5 541 SMART SM00316 260 332 8.5E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_14870 47f595712e5dfdd51c73f01ac527dbfd 724 Pfam PF13166 AAA domain 12 710 2.3E-132 T 11-10-2018 IPR026866 Protein CR006, P-loop domain AVL55_14870 47f595712e5dfdd51c73f01ac527dbfd 724 Gene3D G3DSA:3.40.50.300 203 598 8.8E-10 T 11-10-2018 AVL55_14870 47f595712e5dfdd51c73f01ac527dbfd 724 SUPERFAMILY SSF52540 2 580 1.12E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14870 47f595712e5dfdd51c73f01ac527dbfd 724 Gene3D G3DSA:3.40.50.300 1 165 1.1E-6 T 11-10-2018 AVL55_18475 5ea15685c17562acb26bf3479a413980 294 Gene3D G3DSA:2.60.130.10 61 258 3.3E-36 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AVL55_18475 5ea15685c17562acb26bf3479a413980 294 SUPERFAMILY SSF49482 93 270 4.45E-33 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AVL55_18475 5ea15685c17562acb26bf3479a413980 294 Pfam PF00775 Dioxygenase 119 235 5.2E-8 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 SMART SM01403 7 101 3.8E-57 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 SUPERFAMILY SSF54999 5 101 5.89E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 Gene3D G3DSA:3.30.70.600 1 103 5.6E-38 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.2E-35 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 9.5E-47 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.185 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 8.3E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 8.3E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 8.3E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01585 606e6d2095dfb9e5b5cda28463815b76 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 PIRSF PIRSF006205 1 394 5.6E-148 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 388 45.615 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 SUPERFAMILY SSF55347 126 270 2.09E-60 T 11-10-2018 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 386 1.7E-154 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 3.1E-36 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 SUPERFAMILY SSF51735 2 150 1.34E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 Gene3D G3DSA:1.10.1740.10 308 392 8.1E-26 T 11-10-2018 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 Gene3D G3DSA:3.40.50.720 1 150 8.2E-52 T 11-10-2018 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 SUPERFAMILY SSF69055 298 390 1.7E-27 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 5.3E-45 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AVL55_04720 e8dcd2aa2cbbbfb99d820be4c6059c32 395 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 235 5.8E-37 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AVL55_04295 35fee265d762d6070a9242b0b305ccfc 221 SUPERFAMILY SSF49299 79 169 2.75E-6 T 11-10-2018 IPR035986 PKD domain superfamily AVL55_04295 35fee265d762d6070a9242b0b305ccfc 221 Pfam PF03160 Calx-beta domain 1 55 2.4E-9 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AVL55_04295 35fee265d762d6070a9242b0b305ccfc 221 Gene3D G3DSA:2.60.40.2030 1 78 7.5E-13 T 11-10-2018 IPR038081 CalX-like domain superfamily AVL55_04295 35fee265d762d6070a9242b0b305ccfc 221 Gene3D G3DSA:2.60.40.10 80 173 2.5E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_04295 35fee265d762d6070a9242b0b305ccfc 221 SUPERFAMILY SSF141072 1 79 3.14E-14 T 11-10-2018 IPR038081 CalX-like domain superfamily AVL55_15455 b6190403d94fb222b596c54c40470e74 181 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 168 179 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AVL55_15455 b6190403d94fb222b596c54c40470e74 181 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 44 179 3.6E-34 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AVL55_15455 b6190403d94fb222b596c54c40470e74 181 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 72 82 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AVL55_15455 b6190403d94fb222b596c54c40470e74 181 Gene3D G3DSA:2.60.40.200 30 181 7.4E-50 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AVL55_15455 b6190403d94fb222b596c54c40470e74 181 SUPERFAMILY SSF49329 39 180 2.09E-48 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Pfam PF00476 DNA polymerase family A 551 928 1.5E-160 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 SUPERFAMILY SSF88723 3 170 2.58E-58 T 11-10-2018 IPR029060 PIN-like domain superfamily AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 SMART SM00279 173 208 4.7E-10 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 SUPERFAMILY SSF53098 334 519 6.4E-58 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Pfam PF01612 3'-5' exonuclease 331 517 2.9E-42 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 ProSitePatterns PS00447 DNA polymerase family A signature. 755 774 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 SMART SM00482 687 894 1.8E-122 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 TIGRFAM TIGR00593 pola: DNA polymerase I 10 930 6.3E-291 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 SMART SM00474 331 518 6.5E-42 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 SUPERFAMILY SSF56672 523 930 1.11E-161 T 11-10-2018 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 5.9E-56 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Gene3D G3DSA:1.10.150.20 174 253 5.3E-95 T 11-10-2018 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 2.1E-26 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 SMART SM00475 5 268 5.6E-122 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Gene3D G3DSA:3.30.70.370 665 926 2.2E-116 T 11-10-2018 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 6.9E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 656 678 6.9E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 694 6.9E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 724 6.9E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 744 6.9E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 755 780 6.9E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 803 6.9E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 825 6.9E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 846 862 6.9E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Gene3D G3DSA:3.30.420.10 328 543 5.8E-69 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Gene3D G3DSA:1.10.150.20 710 853 2.2E-116 T 11-10-2018 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 SUPERFAMILY SSF47807 171 293 4.93E-28 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Gene3D G3DSA:3.40.50.1010 10 284 5.3E-95 T 11-10-2018 AVL55_00070 1529680ada5cecaf5c3eb17952717ad8 930 Gene3D G3DSA:1.20.1060.10 544 659 1.1E-42 T 11-10-2018 AVL55_08945 f53fcbbdcfa6db3e9220db9e3d7bff44 554 SUPERFAMILY SSF52096 101 472 1.42E-33 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_08945 f53fcbbdcfa6db3e9220db9e3d7bff44 554 Gene3D G3DSA:3.90.226.10 254 491 1.6E-64 T 11-10-2018 AVL55_08945 f53fcbbdcfa6db3e9220db9e3d7bff44 554 Pfam PF03572 Peptidase family S41 269 420 2.5E-15 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AVL55_08945 f53fcbbdcfa6db3e9220db9e3d7bff44 554 Gene3D G3DSA:3.30.750.170 99 449 1.6E-64 T 11-10-2018 AVL55_08945 f53fcbbdcfa6db3e9220db9e3d7bff44 554 Gene3D G3DSA:2.30.42.10 150 253 1.6E-64 T 11-10-2018 AVL55_08945 f53fcbbdcfa6db3e9220db9e3d7bff44 554 SUPERFAMILY SSF50156 151 253 1.54E-6 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 SUPERFAMILY SSF49299 679 759 4.45E-20 T 11-10-2018 IPR035986 PKD domain superfamily AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 386 396 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 SMART SM00089 682 760 1.3E-16 T 11-10-2018 IPR022409 PKD/Chitinase domain AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 SMART SM00089 453 548 15.0 T 11-10-2018 IPR022409 PKD/Chitinase domain AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 SUPERFAMILY SSF49785 578 673 4.25E-22 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 Pfam PF00801 PKD domain 690 746 3.6E-13 T 11-10-2018 IPR000601 PKD domain AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 162 173 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 221 231 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 SUPERFAMILY SSF52743 109 436 1.57E-72 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 Gene3D G3DSA:2.60.40.10 676 761 6.5E-26 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 Gene3D G3DSA:3.40.50.200 117 452 1.8E-109 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 PRINTS PR00723 Subtilisin serine protease family (S8) signature 157 176 3.9E-19 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 PRINTS PR00723 Subtilisin serine protease family (S8) signature 385 401 3.9E-19 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 PRINTS PR00723 Subtilisin serine protease family (S8) signature 217 230 3.9E-19 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 Pfam PF01483 Proprotein convertase P-domain 591 669 6.7E-19 T 11-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 Pfam PF00082 Subtilase family 158 422 3.9E-42 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AVL55_16525 7f698f2915c03001f49e62423ff5b9ee 840 Gene3D G3DSA:2.60.120.260 563 675 6.0E-18 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AVL55_01710 287495f945207884788325272af7fbe4 427 Gene3D G3DSA:1.10.8.350 62 227 3.0E-88 T 11-10-2018 AVL55_01710 287495f945207884788325272af7fbe4 427 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 51 347 8.7E-113 T 11-10-2018 IPR011970 Lytic murein transglycosylase AVL55_01710 287495f945207884788325272af7fbe4 427 Pfam PF01471 Putative peptidoglycan binding domain 363 418 2.3E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like AVL55_01710 287495f945207884788325272af7fbe4 427 Gene3D G3DSA:1.10.101.10 360 422 5.6E-11 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AVL55_01710 287495f945207884788325272af7fbe4 427 SUPERFAMILY SSF53955 39 348 9.7E-99 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AVL55_01710 287495f945207884788325272af7fbe4 427 SUPERFAMILY SSF47090 359 420 4.19E-14 T 11-10-2018 IPR036365 PGBD-like superfamily AVL55_01710 287495f945207884788325272af7fbe4 427 Pfam PF13406 Transglycosylase SLT domain 51 343 2.3E-107 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 AVL55_01710 287495f945207884788325272af7fbe4 427 Gene3D G3DSA:1.10.530.10 94 342 3.0E-88 T 11-10-2018 AVL55_14365 120176c1660ddcef1962dd6a80695b2c 722 SUPERFAMILY SSF56935 31 722 1.44E-98 T 11-10-2018 AVL55_14365 120176c1660ddcef1962dd6a80695b2c 722 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 165 3.1E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_14365 120176c1660ddcef1962dd6a80695b2c 722 Gene3D G3DSA:2.170.130.10 64 181 1.5E-17 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_14365 120176c1660ddcef1962dd6a80695b2c 722 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 705 722 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AVL55_14365 120176c1660ddcef1962dd6a80695b2c 722 Gene3D G3DSA:2.40.170.20 182 722 3.8E-78 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_14365 120176c1660ddcef1962dd6a80695b2c 722 Pfam PF00593 TonB dependent receptor 247 721 1.6E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_14365 120176c1660ddcef1962dd6a80695b2c 722 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 74 722 7.0E-100 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AVL55_04205 fca222f4cd4654d2bbf129f548ec468a 367 SUPERFAMILY SSF82689 252 349 4.84E-20 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AVL55_04205 fca222f4cd4654d2bbf129f548ec468a 367 Gene3D G3DSA:3.30.70.100 247 343 2.3E-18 T 11-10-2018 AVL55_04205 fca222f4cd4654d2bbf129f548ec468a 367 Pfam PF00924 Mechanosensitive ion channel 136 339 1.4E-45 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_04205 fca222f4cd4654d2bbf129f548ec468a 367 Gene3D G3DSA:2.30.30.60 193 243 3.7E-11 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_04205 fca222f4cd4654d2bbf129f548ec468a 367 SUPERFAMILY SSF82861 97 176 9.42E-11 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AVL55_04205 fca222f4cd4654d2bbf129f548ec468a 367 SUPERFAMILY SSF50182 178 243 2.71E-16 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 178 586 8.0E-154 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 341 351 6.0E-19 T 11-10-2018 IPR001775 GspD/PilQ family AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 574 588 6.0E-19 T 11-10-2018 IPR001775 GspD/PilQ family AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 424 448 6.0E-19 T 11-10-2018 IPR001775 GspD/PilQ family AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 551 569 6.0E-19 T 11-10-2018 IPR001775 GspD/PilQ family AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 Pfam PF03958 Bacterial type II/III secretion system short domain 278 341 2.7E-13 T 11-10-2018 IPR005644 NolW-like AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 Gene3D G3DSA:2.60.40.3470 47 159 5.0E-13 T 11-10-2018 AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 Gene3D G3DSA:3.30.1370.120 276 337 1.3E-9 T 11-10-2018 IPR038591 NolW-like superfamily AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 Pfam PF00263 Bacterial type II and III secretion system protein 428 586 7.5E-47 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 532 565 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 SMART SM00965 203 251 3.0E-8 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AVL55_01920 ab7de965cc62065805c047b2f465d8cb 590 Gene3D G3DSA:3.55.50.30 160 275 2.8E-41 T 11-10-2018 AVL55_18015 0f32519a0edb825bbe4b620d19cda136 222 Gene3D G3DSA:3.40.50.150 21 218 5.4E-28 T 11-10-2018 AVL55_18015 0f32519a0edb825bbe4b620d19cda136 222 Pfam PF02390 Putative methyltransferase 57 213 5.8E-11 T 11-10-2018 AVL55_18015 0f32519a0edb825bbe4b620d19cda136 222 SUPERFAMILY SSF53335 43 121 1.66E-13 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_17990 40ea672b88bd1a3233c1cd8423408e96 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 136 2.6E-43 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AVL55_17990 40ea672b88bd1a3233c1cd8423408e96 165 Gene3D G3DSA:3.30.70.560 5 161 1.5E-56 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AVL55_17990 40ea672b88bd1a3233c1cd8423408e96 165 SUPERFAMILY SSF55083 5 159 4.71E-52 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AVL55_17990 40ea672b88bd1a3233c1cd8423408e96 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 136 1.2E-37 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AVL55_17990 40ea672b88bd1a3233c1cd8423408e96 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 91 102 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AVL55_07560 d26ef14513fee83a69d450978a014dd1 468 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 90 105 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_07560 d26ef14513fee83a69d450978a014dd1 468 PRINTS PR00175 Sodium/alanine symporter signature 181 199 1.8E-51 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_07560 d26ef14513fee83a69d450978a014dd1 468 PRINTS PR00175 Sodium/alanine symporter signature 209 228 1.8E-51 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_07560 d26ef14513fee83a69d450978a014dd1 468 PRINTS PR00175 Sodium/alanine symporter signature 90 112 1.8E-51 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_07560 d26ef14513fee83a69d450978a014dd1 468 PRINTS PR00175 Sodium/alanine symporter signature 347 369 1.8E-51 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_07560 d26ef14513fee83a69d450978a014dd1 468 PRINTS PR00175 Sodium/alanine symporter signature 408 428 1.8E-51 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_07560 d26ef14513fee83a69d450978a014dd1 468 PRINTS PR00175 Sodium/alanine symporter signature 302 320 1.8E-51 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_07560 d26ef14513fee83a69d450978a014dd1 468 Pfam PF01235 Sodium:alanine symporter family 53 447 1.3E-147 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_07560 d26ef14513fee83a69d450978a014dd1 468 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 439 5.8E-141 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 323 44.782 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 Gene3D G3DSA:3.30.540.10 3 185 5.4E-60 T 11-10-2018 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 PIRSF PIRSF500210 2 325 3.5E-118 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 169 192 1.9E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 195 222 1.9E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 297 322 1.9E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 1.9E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 138 161 1.9E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 1.9E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 184 2.6E-52 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 263 275 - T 11-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 PIRSF PIRSF000904 2 325 7.8E-115 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 SUPERFAMILY SSF56655 3 320 1.31E-109 T 11-10-2018 AVL55_00880 0b9340ee98bcd70b0182b552647ee393 325 Gene3D G3DSA:3.40.190.80 186 323 3.3E-52 T 11-10-2018 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Gene3D G3DSA:3.40.50.300 493 1005 9.9E-232 T 11-10-2018 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Gene3D G3DSA:2.30.30.840 498 556 9.9E-232 T 11-10-2018 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Pfam PF03461 TRCF domain 1024 1115 7.3E-28 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Gene3D G3DSA:3.90.1150.50 1019 1164 8.3E-45 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SUPERFAMILY SSF52540 798 1005 3.7E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SMART SM00487 615 805 4.7E-34 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SUPERFAMILY SSF52540 18 350 9.74E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SUPERFAMILY SSF52540 360 481 1.81E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SUPERFAMILY SSF143517 1011 1161 3.53E-41 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SUPERFAMILY SSF52540 538 798 3.65E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Pfam PF02559 CarD-like/TRCF domain 495 590 2.4E-24 T 11-10-2018 IPR003711 CarD-like/TRCF domain AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SMART SM00982 1023 1123 1.1E-48 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SMART SM00490 841 925 6.8E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1145 27.714 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Gene3D G3DSA:3.40.50.11180 30 344 4.5E-119 T 11-10-2018 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Gene3D G3DSA:3.40.50.11140 365 467 1.7E-11 T 11-10-2018 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 156 1096 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SUPERFAMILY SSF141259 485 561 1.44E-22 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Pfam PF00271 Helicase conserved C-terminal domain 822 924 1.6E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Pfam PF00270 DEAD/DEAH box helicase 620 780 1.1E-20 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Gene3D G3DSA:3.40.50.300 557 796 9.9E-232 T 11-10-2018 AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 SMART SM01058 494 591 5.5E-46 T 11-10-2018 IPR003711 CarD-like/TRCF domain AVL55_08300 f419ee76f097ad86f2ead5456d1f65a9 1165 Gene3D G3DSA:3.30.2060.10 139 224 4.5E-119 T 11-10-2018 AVL55_12920 70b595a01718038a4191302ab5edc932 238 Pfam PF00814 Glycoprotease family 28 192 2.4E-27 T 11-10-2018 IPR000905 Gcp-like domain AVL55_12920 70b595a01718038a4191302ab5edc932 238 Gene3D G3DSA:3.30.420.40 3 229 2.2E-71 T 11-10-2018 AVL55_12920 70b595a01718038a4191302ab5edc932 238 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 226 3.6E-61 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AVL55_12920 70b595a01718038a4191302ab5edc932 238 Gene3D G3DSA:3.30.420.40 94 195 2.2E-71 T 11-10-2018 AVL55_12920 70b595a01718038a4191302ab5edc932 238 SUPERFAMILY SSF53067 112 224 1.64E-19 T 11-10-2018 AVL55_12920 70b595a01718038a4191302ab5edc932 238 SUPERFAMILY SSF53067 1 100 9.5E-29 T 11-10-2018 AVL55_13495 3c0fa1fdc379133e785d93ab630259e7 170 Pfam PF12019 Type II transport protein GspH 33 132 2.4E-13 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AVL55_13495 3c0fa1fdc379133e785d93ab630259e7 170 SUPERFAMILY SSF54523 1 119 1.65E-11 T 11-10-2018 AVL55_13495 3c0fa1fdc379133e785d93ab630259e7 170 Gene3D G3DSA:3.55.40.10 18 158 3.7E-10 T 11-10-2018 AVL55_17825 203345ec24f8285c5fafcaaf9c8bbab2 442 SUPERFAMILY SSF52540 3 440 2.0E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17825 203345ec24f8285c5fafcaaf9c8bbab2 442 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 442 43.331 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AVL55_17825 203345ec24f8285c5fafcaaf9c8bbab2 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 9.4E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_17825 203345ec24f8285c5fafcaaf9c8bbab2 442 Gene3D G3DSA:1.10.8.60 334 439 1.5E-39 T 11-10-2018 AVL55_17825 203345ec24f8285c5fafcaaf9c8bbab2 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 182 328 1.9E-42 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_17825 203345ec24f8285c5fafcaaf9c8bbab2 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 442 2.1E-220 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AVL55_17825 203345ec24f8285c5fafcaaf9c8bbab2 442 SMART SM01086 334 430 3.5E-20 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AVL55_17825 203345ec24f8285c5fafcaaf9c8bbab2 442 SMART SM00382 49 331 3.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_00530 eb24fcd3c6436ede6ce04ed6c648d2a9 391 SUPERFAMILY SSF48452 92 356 3.52E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_00530 eb24fcd3c6436ede6ce04ed6c648d2a9 391 Pfam PF07219 HemY protein N-terminus 29 132 3.5E-23 T 11-10-2018 IPR010817 HemY, N-terminal AVL55_00530 eb24fcd3c6436ede6ce04ed6c648d2a9 391 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 7 385 8.0E-71 T 11-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AVL55_00530 eb24fcd3c6436ede6ce04ed6c648d2a9 391 Gene3D G3DSA:1.25.40.10 153 391 7.0E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_03260 ece811a7488a8bc0cca0f9a171e5550f 408 Pfam PF07995 Glucose / Sorbosone dehydrogenase 86 401 2.4E-77 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AVL55_03260 ece811a7488a8bc0cca0f9a171e5550f 408 SUPERFAMILY SSF50952 89 407 7.06E-25 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AVL55_03260 ece811a7488a8bc0cca0f9a171e5550f 408 Gene3D G3DSA:2.120.10.30 55 406 3.5E-71 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Gene3D G3DSA:3.10.20.310 269 350 7.2E-17 T 11-10-2018 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 825 24.221 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Gene3D G3DSA:3.10.20.310 96 176 5.1E-14 T 11-10-2018 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 PIRSF PIRSF006076 1 825 2.1E-232 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 825 2.0E-261 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Gene3D G3DSA:3.10.20.310 22 95 1.4E-16 T 11-10-2018 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Gene3D G3DSA:3.10.20.310 179 268 2.9E-21 T 11-10-2018 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Gene3D G3DSA:3.10.20.310 351 429 1.3E-19 T 11-10-2018 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Pfam PF01103 Surface antigen 452 825 1.6E-78 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Gene3D G3DSA:2.40.160.50 430 825 1.2E-112 T 11-10-2018 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Pfam PF07244 Surface antigen variable number repeat 180 267 2.4E-14 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Pfam PF07244 Surface antigen variable number repeat 270 348 6.5E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Pfam PF07244 Surface antigen variable number repeat 96 176 3.9E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AVL55_04730 dfd2fec87acad766f05cecbb5073b32b 825 Pfam PF07244 Surface antigen variable number repeat 351 425 2.9E-10 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AVL55_17330 64f32fa18c772b72472b50ec77ecaec6 695 SUPERFAMILY SSF53448 417 665 4.03E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17330 64f32fa18c772b72472b50ec77ecaec6 695 Pfam PF00535 Glycosyl transferase family 2 434 616 5.5E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_17330 64f32fa18c772b72472b50ec77ecaec6 695 Gene3D G3DSA:3.90.550.10 408 664 3.7E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_09630 094ce8229b753a498b6e6498cc41b769 1018 Gene3D G3DSA:2.170.130.10 56 172 3.2E-13 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_09630 094ce8229b753a498b6e6498cc41b769 1018 SUPERFAMILY SSF56935 41 1017 1.25E-76 T 11-10-2018 AVL55_09630 094ce8229b753a498b6e6498cc41b769 1018 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 8.1E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_09630 094ce8229b753a498b6e6498cc41b769 1018 Pfam PF00593 TonB dependent receptor 458 1017 6.6E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_09630 094ce8229b753a498b6e6498cc41b769 1018 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 46 1017 7.2E-174 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 Pfam PF00106 short chain dehydrogenase 8 202 1.4E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 Gene3D G3DSA:3.40.50.720 2 289 2.6E-73 T 11-10-2018 AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 SUPERFAMILY SSF51735 2 256 1.22E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14660 5b8c0eec29f5debf299f8b93832a1cd4 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_16025 a8eb6d9807b4de14fcf18c5a19a3d882 241 SMART SM00563 67 182 2.2E-33 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_16025 a8eb6d9807b4de14fcf18c5a19a3d882 241 Pfam PF01553 Acyltransferase 63 178 6.8E-27 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_16025 a8eb6d9807b4de14fcf18c5a19a3d882 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 178 1.7E-38 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AVL55_16025 a8eb6d9807b4de14fcf18c5a19a3d882 241 SUPERFAMILY SSF69593 13 234 2.88E-40 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 67 92 9.1E-72 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 448 463 9.1E-72 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 284 303 9.1E-72 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 157 176 9.1E-72 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 139 157 9.1E-72 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 383 401 9.1E-72 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 254 270 9.1E-72 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 9.1E-72 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 472 489 9.1E-72 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 383 407 - T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 Gene3D G3DSA:3.60.20.40 385 567 4.1E-65 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 Gene3D G3DSA:1.10.246.130 270 384 5.4E-33 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 47 559 5.1E-161 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 Pfam PF01019 Gamma-glutamyltranspeptidase 60 562 2.4E-166 T 11-10-2018 AVL55_02315 c61fb4abe87bab00e4736621c4be3fd6 572 SUPERFAMILY SSF56235 42 559 6.79E-169 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 Gene3D G3DSA:1.20.1580.10 619 776 2.2E-124 T 11-10-2018 AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 Gene3D G3DSA:3.40.50.300 10 466 3.7E-166 T 11-10-2018 AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 Gene3D G3DSA:1.20.1580.10 95 365 3.7E-166 T 11-10-2018 AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 SUPERFAMILY SSF52540 8 457 7.72E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 Gene3D G3DSA:1.10.8.280 153 277 3.7E-166 T 11-10-2018 AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 ProSitePatterns PS00211 ABC transporters family signature. 735 749 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 ProSitePatterns PS00211 ABC transporters family signature. 365 379 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 Pfam PF00005 ABC transporter 500 765 1.3E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 SUPERFAMILY SSF52540 495 818 7.73E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15535 f75228a768c62d13cc3da2e38e86e6b1 846 Gene3D G3DSA:3.40.50.300 491 841 2.2E-124 T 11-10-2018 AVL55_14740 4c621af159dec72b283648ea8163e256 152 SUPERFAMILY SSF50630 34 134 5.46E-8 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AVL55_14740 4c621af159dec72b283648ea8163e256 152 Pfam PF13650 Aspartyl protease 44 130 5.4E-10 T 11-10-2018 AVL55_14740 4c621af159dec72b283648ea8163e256 152 Gene3D G3DSA:2.40.70.10 22 149 7.5E-19 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AVL55_14740 4c621af159dec72b283648ea8163e256 152 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 54 65 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 Gene3D G3DSA:3.40.50.300 1 207 1.4E-62 T 11-10-2018 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 137 147 2.0E-27 T 11-10-2018 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 4 21 2.0E-27 T 11-10-2018 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 151 162 2.0E-27 T 11-10-2018 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 36 47 2.0E-27 T 11-10-2018 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 81 96 2.0E-27 T 11-10-2018 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 173 186 2.0E-27 T 11-10-2018 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 TIGRFAM TIGR00235 udk: uridine kinase 3 205 3.1E-73 T 11-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 193 3.0E-40 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AVL55_17125 b3f29ad70ee71d3779f3866e64a68439 207 SUPERFAMILY SSF52540 3 199 1.59E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 SUPERFAMILY SSF52540 314 588 2.09E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 Gene3D G3DSA:3.40.50.300 314 490 1.5E-61 T 11-10-2018 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 SUPERFAMILY SSF54211 595 770 2.84E-59 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 PIRSF PIRSF001174 1 774 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 5.0E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 SUPERFAMILY SSF88697 10 201 5.22E-49 T 11-10-2018 IPR015947 PUA-like superfamily AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 Gene3D G3DSA:2.30.130.40 1 117 5.1E-36 T 11-10-2018 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 SMART SM00382 348 492 7.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 Gene3D G3DSA:1.10.8.60 491 584 1.3E-32 T 11-10-2018 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 Gene3D G3DSA:1.20.58.1480 120 245 7.6E-45 T 11-10-2018 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 Gene3D G3DSA:3.30.230.10 585 772 3.1E-85 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 6.7E-55 T 11-10-2018 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 6.7E-55 T 11-10-2018 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 6.7E-55 T 11-10-2018 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 6.7E-55 T 11-10-2018 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 6.7E-55 T 11-10-2018 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 4.7E-99 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 Hamap MF_01973 Lon protease [lon]. 11 772 72.198 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.2E-41 T 11-10-2018 IPR003111 Lon, substrate-binding domain AVL55_13635 95ad33766eebdb15abc716fa13436baa 783 SMART SM00464 10 202 4.6E-78 T 11-10-2018 IPR003111 Lon, substrate-binding domain AVL55_09735 2d8a08097436e62cc97e367024161663 161 Pfam PF00255 Glutathione peroxidase 4 110 4.2E-42 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_09735 2d8a08097436e62cc97e367024161663 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AVL55_09735 2d8a08097436e62cc97e367024161663 161 PIRSF PIRSF000303 1 161 3.8E-65 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_09735 2d8a08097436e62cc97e367024161663 161 PRINTS PR01011 Glutathione peroxidase family signature 56 72 3.9E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_09735 2d8a08097436e62cc97e367024161663 161 PRINTS PR01011 Glutathione peroxidase family signature 122 131 3.9E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_09735 2d8a08097436e62cc97e367024161663 161 PRINTS PR01011 Glutathione peroxidase family signature 21 38 3.9E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_09735 2d8a08097436e62cc97e367024161663 161 SUPERFAMILY SSF52833 7 158 3.85E-62 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_09735 2d8a08097436e62cc97e367024161663 161 Gene3D G3DSA:3.40.30.10 2 161 9.6E-71 T 11-10-2018 AVL55_05365 f6eab65a75a8ab828aaf8441d0a4d75b 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.2E-168 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AVL55_05365 f6eab65a75a8ab828aaf8441d0a4d75b 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 4.0E-158 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AVL55_05365 f6eab65a75a8ab828aaf8441d0a4d75b 376 PIRSF PIRSF015658 1 376 1.8E-175 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 Pfam PF00403 Heavy-metal-associated domain 25 85 1.1E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 Gene3D G3DSA:3.30.70.100 17 94 5.8E-17 T 11-10-2018 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 PRINTS PR00946 Mercury scavenger protein signature 47 62 8.4E-27 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 PRINTS PR00946 Mercury scavenger protein signature 76 90 8.4E-27 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 PRINTS PR00946 Mercury scavenger protein signature 62 76 8.4E-27 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 PRINTS PR00946 Mercury scavenger protein signature 20 31 8.4E-27 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 PRINTS PR00946 Mercury scavenger protein signature 31 47 8.4E-27 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 PRINTS PR00946 Mercury scavenger protein signature 2 20 8.4E-27 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 SUPERFAMILY SSF55008 19 91 2.62E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_05670 245e415088fa3c62b305a119bb9b0cec 94 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 90 1.4E-37 T 11-10-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 Gene3D G3DSA:2.70.150.20 222 334 3.2E-42 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 162 739 1.9E-188 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 Pfam PF00403 Heavy-metal-associated domain 12 66 3.8E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 SUPERFAMILY SSF81653 233 329 9.15E-30 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 566 5.3E-28 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 279 293 5.3E-28 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 665 5.3E-28 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 577 587 5.3E-28 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 649 5.3E-28 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 431 445 5.3E-28 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 Pfam PF00122 E1-E2 ATPase 230 410 1.6E-55 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 Gene3D G3DSA:3.40.1110.10 442 562 4.4E-94 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 SUPERFAMILY SSF55008 4 73 2.62E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 SUPERFAMILY SSF56784 431 736 7.66E-54 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 Gene3D G3DSA:3.30.70.100 8 70 1.7E-15 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 602 618 2.8E-10 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 630 646 2.8E-10 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 661 686 2.8E-10 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 207 707 1.0E-90 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 433 439 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 SUPERFAMILY SSF81665 202 707 6.54E-10 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 Pfam PF00702 haloacid dehalogenase-like hydrolase 428 644 6.7E-41 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 144 740 1.9E-186 T 11-10-2018 AVL55_01390 2c2db4180ee9e64d1bac497acc698af8 747 Gene3D G3DSA:3.40.50.1000 412 682 4.4E-94 T 11-10-2018 IPR023214 HAD superfamily AVL55_19805 6eeaf24e1afe96521a262f9547da39a2 123 SMART SM00530 60 114 0.0068 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_19805 6eeaf24e1afe96521a262f9547da39a2 123 Gene3D G3DSA:1.10.260.40 52 117 2.7E-7 T 11-10-2018 AVL55_19805 6eeaf24e1afe96521a262f9547da39a2 123 SUPERFAMILY SSF47413 48 115 8.44E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_02065 3ca48bb049cd4dc357840eb1d6f5d1a0 169 Gene3D G3DSA:3.10.420.10 14 165 2.8E-59 T 11-10-2018 IPR035958 SecB-like superfamily AVL55_02065 3ca48bb049cd4dc357840eb1d6f5d1a0 169 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 19 155 2.3E-60 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AVL55_02065 3ca48bb049cd4dc357840eb1d6f5d1a0 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 109 131 4.6E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AVL55_02065 3ca48bb049cd4dc357840eb1d6f5d1a0 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 85 105 4.6E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AVL55_02065 3ca48bb049cd4dc357840eb1d6f5d1a0 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 135 153 4.6E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AVL55_02065 3ca48bb049cd4dc357840eb1d6f5d1a0 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 25 42 4.6E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AVL55_02065 3ca48bb049cd4dc357840eb1d6f5d1a0 169 Pfam PF02556 Preprotein translocase subunit SecB 17 155 1.6E-57 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AVL55_02065 3ca48bb049cd4dc357840eb1d6f5d1a0 169 Hamap MF_00821 Protein-export protein SecB [secB]. 1 157 33.78 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AVL55_02065 3ca48bb049cd4dc357840eb1d6f5d1a0 169 SUPERFAMILY SSF54611 13 152 1.0E-53 T 11-10-2018 IPR035958 SecB-like superfamily AVL55_03050 6fb823e1c16a86ade602c44fdce7d575 586 SUPERFAMILY SSF47203 286 462 6.93E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_03050 6fb823e1c16a86ade602c44fdce7d575 586 Gene3D G3DSA:2.40.110.10 160 285 2.4E-28 T 11-10-2018 AVL55_03050 6fb823e1c16a86ade602c44fdce7d575 586 Gene3D G3DSA:1.20.140.10 286 455 2.6E-43 T 11-10-2018 AVL55_03050 6fb823e1c16a86ade602c44fdce7d575 586 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 449 1.8E-18 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_03050 6fb823e1c16a86ade602c44fdce7d575 586 SUPERFAMILY SSF56645 34 291 1.7E-53 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_03050 6fb823e1c16a86ade602c44fdce7d575 586 Gene3D G3DSA:1.10.540.10 23 159 2.4E-12 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AVL55_03050 6fb823e1c16a86ade602c44fdce7d575 586 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 1.7E-8 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AVL55_03050 6fb823e1c16a86ade602c44fdce7d575 586 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 487 578 6.6E-11 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AVL55_03050 6fb823e1c16a86ade602c44fdce7d575 586 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 6.5E-17 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 SUPERFAMILY SSF46894 153 213 2.48E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 SUPERFAMILY SSF52172 2 132 3.13E-25 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_07395 404e52ba209c5db7d7f8922510119105 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 5.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 5.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 5.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 Gene3D G3DSA:3.40.50.12740 3 219 9.1E-48 T 11-10-2018 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 211 4.8E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 SMART SM00421 158 215 2.2E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 Pfam PF00072 Response regulator receiver domain 5 116 1.4E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 SMART SM00448 3 116 7.5E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07395 404e52ba209c5db7d7f8922510119105 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 175 202 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 SMART SM00421 146 203 1.0E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 8.9E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 SUPERFAMILY SSF46894 142 211 4.42E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 SUPERFAMILY SSF52172 2 131 1.05E-32 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.9E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.9E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.9E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 Pfam PF00072 Response regulator receiver domain 4 115 6.3E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 SMART SM00448 2 115 6.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_10860 77e1540ee0a446ac10d1ca8a94c85697 214 Gene3D G3DSA:3.40.50.12740 2 209 1.2E-58 T 11-10-2018 AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 Gene3D G3DSA:3.40.1190.20 232 499 9.4E-85 T 11-10-2018 IPR029056 Ribokinase-like AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 Gene3D G3DSA:3.40.50.10260 10 222 9.5E-57 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 231 498 22.474 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 SUPERFAMILY SSF53613 240 498 6.24E-72 T 11-10-2018 IPR029056 Ribokinase-like AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 18 216 1.4E-41 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 241 497 2.0E-67 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 16 217 22.486 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 437 447 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 SUPERFAMILY SSF64153 13 253 1.23E-56 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 PIRSF PIRSF017184 12 499 3.3E-131 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 Pfam PF03853 YjeF-related protein N-terminus 37 196 1.6E-37 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AVL55_18535 6f7b46296a419c9444f32e2540b0c540 499 Pfam PF01256 Carbohydrate kinase 255 492 1.8E-58 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AVL55_03190 c297d38d6a8e08b421b222698fb7fa5b 229 SUPERFAMILY SSF52172 2 128 1.15E-42 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_03190 c297d38d6a8e08b421b222698fb7fa5b 229 Gene3D G3DSA:3.40.50.2300 1 127 4.8E-38 T 11-10-2018 AVL55_03190 c297d38d6a8e08b421b222698fb7fa5b 229 SMART SM00448 3 116 1.0E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_03190 c297d38d6a8e08b421b222698fb7fa5b 229 Pfam PF00072 Response regulator receiver domain 5 117 9.5E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_03190 c297d38d6a8e08b421b222698fb7fa5b 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 4.1E-111 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AVL55_03190 c297d38d6a8e08b421b222698fb7fa5b 229 SMART SM00862 150 225 1.0E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_03190 c297d38d6a8e08b421b222698fb7fa5b 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 5.6E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_03190 c297d38d6a8e08b421b222698fb7fa5b 229 Gene3D G3DSA:1.10.10.10 128 229 2.1E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_03190 c297d38d6a8e08b421b222698fb7fa5b 229 SUPERFAMILY SSF46894 127 226 1.81E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_19025 8213e8d3a15611207d9620d4763f1679 968 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 36 968 5.7E-203 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AVL55_19025 8213e8d3a15611207d9620d4763f1679 968 Pfam PF00593 TonB dependent receptor 492 965 6.4E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_19025 8213e8d3a15611207d9620d4763f1679 968 SUPERFAMILY SSF56935 23 968 3.0E-92 T 11-10-2018 AVL55_19025 8213e8d3a15611207d9620d4763f1679 968 Gene3D G3DSA:2.170.130.10 38 161 1.2E-17 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_19025 8213e8d3a15611207d9620d4763f1679 968 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 156 1.7E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_06540 d788e125c024c37c461832f69d68e509 185 SUPERFAMILY SSF88946 7 111 2.98E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_06540 d788e125c024c37c461832f69d68e509 185 SUPERFAMILY SSF88659 116 174 1.81E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_06540 d788e125c024c37c461832f69d68e509 185 Pfam PF08281 Sigma-70, region 4 117 169 1.5E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_06540 d788e125c024c37c461832f69d68e509 185 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 48 79 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_06540 d788e125c024c37c461832f69d68e509 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 173 1.0E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_06540 d788e125c024c37c461832f69d68e509 185 Pfam PF04542 Sigma-70 region 2 26 92 1.5E-14 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_06540 d788e125c024c37c461832f69d68e509 185 Gene3D G3DSA:1.10.1740.10 3 88 4.2E-19 T 11-10-2018 AVL55_06540 d788e125c024c37c461832f69d68e509 185 Gene3D G3DSA:1.10.10.10 112 176 1.6E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_18965 4007ae6a1430f61c3f37508055554bb8 346 SUPERFAMILY SSF51735 5 165 2.73E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_18965 4007ae6a1430f61c3f37508055554bb8 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 131 217 6.7E-15 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AVL55_18965 4007ae6a1430f61c3f37508055554bb8 346 SUPERFAMILY SSF55347 127 278 4.74E-29 T 11-10-2018 AVL55_18965 4007ae6a1430f61c3f37508055554bb8 346 Gene3D G3DSA:3.40.50.720 3 316 1.7E-110 T 11-10-2018 AVL55_18965 4007ae6a1430f61c3f37508055554bb8 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 4.7E-20 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AVL55_18965 4007ae6a1430f61c3f37508055554bb8 346 Gene3D G3DSA:3.30.360.10 124 330 1.7E-110 T 11-10-2018 AVL55_01485 b58bfeca37585e8bbd4932f7a5c083a6 384 Gene3D G3DSA:3.40.50.720 9 351 1.8E-116 T 11-10-2018 AVL55_01485 b58bfeca37585e8bbd4932f7a5c083a6 384 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 131 9.7E-17 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AVL55_01485 b58bfeca37585e8bbd4932f7a5c083a6 384 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 148 236 5.0E-5 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AVL55_01485 b58bfeca37585e8bbd4932f7a5c083a6 384 SUPERFAMILY SSF51735 3 167 1.71E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_01485 b58bfeca37585e8bbd4932f7a5c083a6 384 SUPERFAMILY SSF55347 142 316 2.29E-33 T 11-10-2018 AVL55_01485 b58bfeca37585e8bbd4932f7a5c083a6 384 Gene3D G3DSA:3.30.360.10 141 375 1.8E-116 T 11-10-2018 AVL55_02845 147cff2cea0449f15b7f30cc2a900066 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 191 1.5E-51 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AVL55_02845 147cff2cea0449f15b7f30cc2a900066 193 SUPERFAMILY SSF53474 4 192 2.48E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_02845 147cff2cea0449f15b7f30cc2a900066 193 Gene3D G3DSA:3.40.50.1820 1 193 1.0E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 SUPERFAMILY SSF50998 63 418 2.75E-13 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Pfam PF07494 Two component regulator propeller 49 71 0.0048 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Pfam PF07494 Two component regulator propeller 378 400 5.8E-4 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Pfam PF07494 Two component regulator propeller 93 113 0.011 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Gene3D G3DSA:2.60.40.10 690 808 4.7E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Gene3D G3DSA:3.30.450.20 840 964 2.1E-12 T 11-10-2018 AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Gene3D G3DSA:3.20.20.450 1277 1531 1.6E-84 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 SUPERFAMILY SSF141868 1278 1523 8.76E-81 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 SMART SM00267 1091 1263 8.0E-65 T 11-10-2018 IPR000160 GGDEF domain AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 SUPERFAMILY SSF55073 1107 1265 1.18E-50 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Gene3D G3DSA:2.130.10.10 369 687 4.9E-48 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Pfam PF08447 PAS fold 875 959 1.3E-9 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 SUPERFAMILY SSF55785 878 966 9.14E-8 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Pfam PF00563 EAL domain 1279 1512 5.9E-67 T 11-10-2018 IPR001633 EAL domain AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Gene3D G3DSA:2.130.10.10 39 360 2.7E-42 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1100 1261 2.3E-43 T 11-10-2018 IPR000160 GGDEF domain AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1102 1259 6.6E-51 T 11-10-2018 IPR000160 GGDEF domain AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 SMART SM00052 1273 1517 1.3E-92 T 11-10-2018 IPR001633 EAL domain AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 SUPERFAMILY SSF55785 985 1098 5.23E-7 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Gene3D G3DSA:3.30.70.270 1097 1276 3.7E-65 T 11-10-2018 AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 Gene3D G3DSA:3.30.450.20 969 1094 1.5E-10 T 11-10-2018 AVL55_06180 9f6822c018461094dcc1775562a561e9 1533 SUPERFAMILY SSF63829 339 640 1.96E-12 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 Gene3D G3DSA:1.20.1640.10 17 511 2.4E-275 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 6.5E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 6.5E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 6.5E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.5E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 6.5E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 Gene3D G3DSA:3.30.70.1440 670 865 2.4E-275 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 SUPERFAMILY SSF82714 727 803 1.14E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 Gene3D G3DSA:1.20.1640.10 512 1022 2.4E-275 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 Gene3D G3DSA:3.30.2090.10 717 804 2.4E-275 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 SUPERFAMILY SSF82714 185 268 2.22E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 Pfam PF00873 AcrB/AcrD/AcrF family 12 1025 4.3E-171 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 Gene3D G3DSA:3.30.2090.10 181 272 2.4E-275 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 Gene3D G3DSA:3.30.70.1430 47 812 2.4E-275 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 SUPERFAMILY SSF82693 143 327 1.41E-14 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 Gene3D G3DSA:3.30.70.1430 569 669 2.4E-275 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 Gene3D G3DSA:3.30.70.1320 140 329 2.4E-275 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 SUPERFAMILY SSF82866 802 1027 9.16E-44 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 SUPERFAMILY SSF82693 47 139 4.39E-17 T 11-10-2018 AVL55_11475 d0d747ab922c85030ecfc8666b409e8c 1044 SUPERFAMILY SSF82866 294 493 9.42E-35 T 11-10-2018 AVL55_06935 d2590efe213029ea98393ddebe5b8c02 139 SMART SM00116 10 57 6.2E-7 T 11-10-2018 IPR000644 CBS domain AVL55_06935 d2590efe213029ea98393ddebe5b8c02 139 SMART SM00116 84 132 2.1E-7 T 11-10-2018 IPR000644 CBS domain AVL55_06935 d2590efe213029ea98393ddebe5b8c02 139 Pfam PF00571 CBS domain 4 56 5.6E-11 T 11-10-2018 IPR000644 CBS domain AVL55_06935 d2590efe213029ea98393ddebe5b8c02 139 Pfam PF00571 CBS domain 78 131 3.6E-14 T 11-10-2018 IPR000644 CBS domain AVL55_06935 d2590efe213029ea98393ddebe5b8c02 139 SUPERFAMILY SSF54631 1 133 1.11E-30 T 11-10-2018 AVL55_06935 d2590efe213029ea98393ddebe5b8c02 139 Gene3D G3DSA:3.10.580.10 1 139 1.3E-33 T 11-10-2018 AVL55_14940 f31d5ed443f0630f33a2957d28061459 371 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 24 338 1.2E-132 T 11-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC AVL55_14940 f31d5ed443f0630f33a2957d28061459 371 Pfam PF02653 Branched-chain amino acid transport system / permease component 31 327 1.6E-41 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AVL55_20035 34dd0fc22212e6e33701565d321d1d5e 292 SMART SM00470 40 130 1.9E-37 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AVL55_20035 34dd0fc22212e6e33701565d321d1d5e 292 Gene3D G3DSA:1.10.10.2830 117 230 3.1E-35 T 11-10-2018 AVL55_20035 34dd0fc22212e6e33701565d321d1d5e 292 Gene3D G3DSA:3.90.1530.30 53 116 1.5E-27 T 11-10-2018 AVL55_20035 34dd0fc22212e6e33701565d321d1d5e 292 SUPERFAMILY SSF110849 39 175 7.85E-36 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AVL55_20035 34dd0fc22212e6e33701565d321d1d5e 292 Pfam PF02195 ParB-like nuclease domain 42 130 7.7E-30 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AVL55_20035 34dd0fc22212e6e33701565d321d1d5e 292 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 210 6.3E-60 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AVL55_04120 f3665cf58378a628e83b3fc52565c070 1245 Gene3D G3DSA:3.40.50.300 1 309 1.2E-46 T 11-10-2018 AVL55_04120 f3665cf58378a628e83b3fc52565c070 1245 SUPERFAMILY SSF52540 1 281 2.47E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04120 f3665cf58378a628e83b3fc52565c070 1245 SUPERFAMILY SSF52540 1 1231 3.48E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04120 f3665cf58378a628e83b3fc52565c070 1245 Pfam PF13476 AAA domain 6 231 1.5E-27 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain AVL55_04120 f3665cf58378a628e83b3fc52565c070 1245 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1135 1199 7.5E-15 T 11-10-2018 AVL55_04120 f3665cf58378a628e83b3fc52565c070 1245 Gene3D G3DSA:3.40.50.300 967 1237 5.4E-27 T 11-10-2018 AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 Gene3D G3DSA:3.90.45.10 1 167 2.6E-65 T 11-10-2018 IPR036821 Peptide deformylase superfamily AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 9.1E-59 T 11-10-2018 IPR023635 Peptide deformylase AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 PRINTS PR01576 Peptide deformylase signature 33 62 4.0E-38 T 11-10-2018 IPR023635 Peptide deformylase AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 PRINTS PR01576 Peptide deformylase signature 120 149 4.0E-38 T 11-10-2018 IPR023635 Peptide deformylase AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 PRINTS PR01576 Peptide deformylase signature 89 100 4.0E-38 T 11-10-2018 IPR023635 Peptide deformylase AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 PRINTS PR01576 Peptide deformylase signature 101 119 4.0E-38 T 11-10-2018 IPR023635 Peptide deformylase AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 PIRSF PIRSF004749 1 168 3.0E-57 T 11-10-2018 IPR023635 Peptide deformylase AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 SUPERFAMILY SSF56420 2 164 4.06E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.147 T 11-10-2018 IPR023635 Peptide deformylase AVL55_00100 c626bd721cf8d6ea451f3585245ee42f 169 Pfam PF01327 Polypeptide deformylase 5 152 3.0E-51 T 11-10-2018 IPR023635 Peptide deformylase AVL55_16155 41b1d7ca0b0f8a3d9a9cdba608129eb2 794 Pfam PF07715 TonB-dependent Receptor Plug Domain 131 241 1.8E-4 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_16155 41b1d7ca0b0f8a3d9a9cdba608129eb2 794 Pfam PF00593 TonB dependent receptor 356 759 6.2E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_16155 41b1d7ca0b0f8a3d9a9cdba608129eb2 794 Gene3D G3DSA:2.60.40.1120 34 115 6.6E-10 T 11-10-2018 AVL55_16155 41b1d7ca0b0f8a3d9a9cdba608129eb2 794 Pfam PF13620 Carboxypeptidase regulatory-like domain 34 113 9.0E-12 T 11-10-2018 AVL55_16155 41b1d7ca0b0f8a3d9a9cdba608129eb2 794 SUPERFAMILY SSF56935 119 758 4.27E-55 T 11-10-2018 AVL55_16155 41b1d7ca0b0f8a3d9a9cdba608129eb2 794 Gene3D G3DSA:2.40.170.20 308 768 1.0E-44 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_16155 41b1d7ca0b0f8a3d9a9cdba608129eb2 794 SUPERFAMILY SSF49464 36 118 5.89E-8 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AVL55_19080 24136af15c1799aba2ab52c67c8dc254 368 Gene3D G3DSA:3.55.50.30 293 367 8.7E-7 T 11-10-2018 AVL55_19080 24136af15c1799aba2ab52c67c8dc254 368 Pfam PF16344 Domain of unknown function (DUF4974) 276 363 1.2E-7 T 11-10-2018 IPR032508 Protein FecR, C-terminal AVL55_19080 24136af15c1799aba2ab52c67c8dc254 368 Gene3D G3DSA:2.60.120.1440 125 279 2.3E-22 T 11-10-2018 AVL55_19080 24136af15c1799aba2ab52c67c8dc254 368 Pfam PF16220 Domain of unknown function (DUF4880) 30 69 1.9E-6 T 11-10-2018 IPR032623 FecR, N-terminal AVL55_19080 24136af15c1799aba2ab52c67c8dc254 368 PIRSF PIRSF018266 20 368 2.9E-63 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AVL55_19080 24136af15c1799aba2ab52c67c8dc254 368 Pfam PF04773 FecR protein 146 236 6.4E-20 T 11-10-2018 IPR006860 FecR protein AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 Gene3D G3DSA:3.30.365.10 142 774 1.7E-264 T 11-10-2018 AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 165 708 1.9E-188 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 Gene3D G3DSA:3.30.365.10 191 285 1.7E-264 T 11-10-2018 AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 SUPERFAMILY SSF56003 144 777 4.19E-183 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 Gene3D G3DSA:3.90.1170.50 20 141 1.7E-264 T 11-10-2018 AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 SUPERFAMILY SSF54665 10 140 3.14E-32 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 SMART SM01008 34 141 1.4E-34 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 Gene3D G3DSA:3.30.365.10 155 410 1.7E-264 T 11-10-2018 AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 20 779 0.0 T 11-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 34 138 3.4E-20 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AVL55_07950 55d3f1a95fe6433d7221ac4479b4600a 788 Gene3D G3DSA:3.30.365.10 462 610 1.7E-264 T 11-10-2018 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 6.5E-28 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 6.5E-28 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 6.5E-28 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 6.5E-28 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 SUPERFAMILY SSF51419 26 283 3.49E-80 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 Gene3D G3DSA:3.20.20.10 34 276 8.1E-146 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 282 370 5.7E-25 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 413 40.759 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 5.0E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 5.0E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 5.0E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 5.0E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 5.0E-27 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 Gene3D G3DSA:2.40.37.10 16 409 8.1E-146 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 241 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 SUPERFAMILY SSF50621 256 413 1.28E-51 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 281 3.4E-74 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AVL55_00840 f5087f938734c46e493b3425902cb2cb 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 412 2.1E-159 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_18245 9dc8ee48c2a1d25d0bd8677c8f7503c9 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 2.9E-47 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18245 9dc8ee48c2a1d25d0bd8677c8f7503c9 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 1.5E-15 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18245 9dc8ee48c2a1d25d0bd8677c8f7503c9 125 Gene3D G3DSA:3.30.1390.10 55 125 2.1E-32 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AVL55_18245 9dc8ee48c2a1d25d0bd8677c8f7503c9 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 125 25.266 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18245 9dc8ee48c2a1d25d0bd8677c8f7503c9 125 Gene3D G3DSA:1.20.5.710 2 54 3.1E-20 T 11-10-2018 AVL55_18245 9dc8ee48c2a1d25d0bd8677c8f7503c9 125 SUPERFAMILY SSF54736 54 125 7.5E-26 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AVL55_18245 9dc8ee48c2a1d25d0bd8677c8f7503c9 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 106 3.0E-17 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18245 9dc8ee48c2a1d25d0bd8677c8f7503c9 125 SUPERFAMILY SSF48300 4 61 3.79E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18245 9dc8ee48c2a1d25d0bd8677c8f7503c9 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 1.7E-31 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 Pfam PF00158 Sigma-54 interaction domain 121 287 5.4E-64 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 SUPERFAMILY SSF52540 121 359 3.3E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 Pfam PF02954 Bacterial regulatory protein, Fis family 380 420 4.2E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 SMART SM00382 141 284 3.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 329 338 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 Gene3D G3DSA:1.10.10.60 380 423 1.7E-10 T 11-10-2018 AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 SUPERFAMILY SSF46689 330 423 1.97E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 Pfam PF08448 PAS fold 3 106 1.2E-5 T 11-10-2018 IPR013656 PAS fold-4 AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 145 158 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 Gene3D G3DSA:3.40.50.300 110 291 7.5E-62 T 11-10-2018 AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 Gene3D G3DSA:1.10.8.60 292 365 2.6E-19 T 11-10-2018 AVL55_18735 a6fe80dc1aa56397e919584e519025ac 426 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 207 222 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 PIRSF PIRSF000188 1 352 9.8E-139 T 11-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 2.4E-14 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 180 200 2.4E-14 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 290 301 2.4E-14 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 Gene3D G3DSA:3.40.50.10860 11 348 5.1E-134 T 11-10-2018 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 SMART SM00839 149 352 8.5E-71 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 221 341 2.7E-12 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 SUPERFAMILY SSF53223 4 140 8.64E-41 T 11-10-2018 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 133 3.7E-26 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 Gene3D G3DSA:3.40.50.720 134 341 5.1E-134 T 11-10-2018 AVL55_05440 6ccc690e443302ccff80b0a935f69714 352 SUPERFAMILY SSF51735 150 348 3.87E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_18615 494778f858c6cdcf46bd392875146bde 370 SMART SM00849 108 315 0.0028 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_18615 494778f858c6cdcf46bd392875146bde 370 Pfam PF12706 Beta-lactamase superfamily domain 122 325 7.1E-32 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_18615 494778f858c6cdcf46bd392875146bde 370 PIRSF PIRSF038896 3 370 1.3E-60 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AVL55_18615 494778f858c6cdcf46bd392875146bde 370 SUPERFAMILY SSF56281 103 330 1.06E-27 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_18615 494778f858c6cdcf46bd392875146bde 370 Gene3D G3DSA:3.60.15.10 80 370 1.4E-64 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_01730 52f9912525f8caa8a67b873a542d5e97 239 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 191 233 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AVL55_01730 52f9912525f8caa8a67b873a542d5e97 239 SUPERFAMILY SSF46689 137 188 7.62E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_01730 52f9912525f8caa8a67b873a542d5e97 239 Pfam PF12833 Helix-turn-helix domain 160 238 8.5E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_01730 52f9912525f8caa8a67b873a542d5e97 239 SUPERFAMILY SSF51182 20 73 8.89E-5 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_01730 52f9912525f8caa8a67b873a542d5e97 239 SUPERFAMILY SSF46689 190 238 1.08E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_01730 52f9912525f8caa8a67b873a542d5e97 239 SMART SM00342 154 237 3.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_01730 52f9912525f8caa8a67b873a542d5e97 239 Gene3D G3DSA:1.10.10.60 135 239 1.2E-22 T 11-10-2018 AVL55_00485 72041cfb7c00ad6c4d15df497b3399fb 461 Pfam PF04317 YcjX-like family, DUF463 33 458 1.4E-77 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AVL55_13560 b9a936984fe7789c9fc8a70c983cb1ac 182 TIGRFAM TIGR00077 lspA: signal peptidase II 4 163 6.5E-48 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_13560 b9a936984fe7789c9fc8a70c983cb1ac 182 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 4.2E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_13560 b9a936984fe7789c9fc8a70c983cb1ac 182 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 4.2E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_13560 b9a936984fe7789c9fc8a70c983cb1ac 182 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 4.2E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_13560 b9a936984fe7789c9fc8a70c983cb1ac 182 Pfam PF01252 Signal peptidase (SPase) II 16 156 7.3E-43 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_13560 b9a936984fe7789c9fc8a70c983cb1ac 182 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 18.035 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_13560 b9a936984fe7789c9fc8a70c983cb1ac 182 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_12435 d8c1e84dbf761b601990d1fbba137f3c 279 SUPERFAMILY SSF82861 26 108 3.79E-16 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AVL55_12435 d8c1e84dbf761b601990d1fbba137f3c 279 Pfam PF00924 Mechanosensitive ion channel 69 264 7.1E-51 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_12435 d8c1e84dbf761b601990d1fbba137f3c 279 Gene3D G3DSA:2.30.30.60 125 173 3.9E-20 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_12435 d8c1e84dbf761b601990d1fbba137f3c 279 SUPERFAMILY SSF82689 178 275 9.55E-33 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AVL55_12435 d8c1e84dbf761b601990d1fbba137f3c 279 SUPERFAMILY SSF50182 110 175 7.19E-17 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_12435 d8c1e84dbf761b601990d1fbba137f3c 279 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 139 173 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AVL55_12435 d8c1e84dbf761b601990d1fbba137f3c 279 Gene3D G3DSA:3.30.70.100 177 268 8.1E-27 T 11-10-2018 AVL55_09745 323f5f51789c6244786ab7448932f12a 511 Gene3D G3DSA:3.40.50.2300 1 99 4.3E-12 T 11-10-2018 AVL55_09745 323f5f51789c6244786ab7448932f12a 511 Pfam PF00072 Response regulator receiver domain 6 97 2.0E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_09745 323f5f51789c6244786ab7448932f12a 511 SUPERFAMILY SSF52172 5 119 2.49E-14 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_09745 323f5f51789c6244786ab7448932f12a 511 SUPERFAMILY SSF48452 140 456 1.9E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_09745 323f5f51789c6244786ab7448932f12a 511 Gene3D G3DSA:1.25.40.10 100 476 2.4E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 48 490 3.6E-153 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 268 322 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 86 109 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 186 204 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 399 418 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 449 470 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 39 64 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 113 137 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 215 234 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 312 327 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 156 168 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 371 389 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 266 287 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 336 357 4.1E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 40 544 6.1E-214 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 Gene3D G3DSA:1.20.210.10 27 545 4.1E-218 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19610 ea46ca0df9f7b5917fcde72606fda876 545 SUPERFAMILY SSF81442 36 544 7.85E-194 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_04415 38c8b9c3b8e01c385511182a90a5d59f 365 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 361 49.677 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AVL55_04415 38c8b9c3b8e01c385511182a90a5d59f 365 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 357 3.2E-155 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AVL55_04415 38c8b9c3b8e01c385511182a90a5d59f 365 Gene3D G3DSA:3.40.718.10 1 364 6.5E-155 T 11-10-2018 AVL55_04415 38c8b9c3b8e01c385511182a90a5d59f 365 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 357 1.8E-130 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AVL55_04415 38c8b9c3b8e01c385511182a90a5d59f 365 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AVL55_04415 38c8b9c3b8e01c385511182a90a5d59f 365 SUPERFAMILY SSF53659 3 361 2.52E-121 T 11-10-2018 AVL55_04415 38c8b9c3b8e01c385511182a90a5d59f 365 SMART SM01329 5 357 6.0E-198 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.5E-35 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 328 1.4E-134 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 SUPERFAMILY SSF55307 204 320 5.49E-41 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 Gene3D G3DSA:3.30.1330.20 221 327 1.8E-33 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 Gene3D G3DSA:3.40.50.1440 4 220 3.2E-80 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 SUPERFAMILY SSF52490 14 205 1.22E-69 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 SMART SM00864 13 205 4.0E-113 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 6.2E-41 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 SMART SM00865 207 325 5.4E-54 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.7E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.7E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.7E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.7E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 354 37.724 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AVL55_15210 372c1a24c98fc6ae97ae1707b60bad90 388 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AVL55_01085 abe1c0ac0787856b36a8f44acbb60804 488 SUPERFAMILY SSF50249 39 127 8.0E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_01085 abe1c0ac0787856b36a8f44acbb60804 488 Gene3D G3DSA:2.40.50.140 30 127 8.7E-31 T 11-10-2018 AVL55_01085 abe1c0ac0787856b36a8f44acbb60804 488 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 425 3.1E-163 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AVL55_01085 abe1c0ac0787856b36a8f44acbb60804 488 SMART SM00316 37 122 1.5E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_01085 abe1c0ac0787856b36a8f44acbb60804 488 Pfam PF00575 S1 RNA binding domain 38 109 9.3E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_01085 abe1c0ac0787856b36a8f44acbb60804 488 Pfam PF10150 Ribonuclease E/G family 124 392 1.3E-100 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AVL55_01085 abe1c0ac0787856b36a8f44acbb60804 488 Gene3D G3DSA:3.40.1260.20 402 487 1.7E-6 T 11-10-2018 AVL55_14260 f3175e4e14efa7b43101fbb0852b48c2 477 Gene3D G3DSA:3.40.50.2300 217 411 4.1E-5 T 11-10-2018 AVL55_14260 f3175e4e14efa7b43101fbb0852b48c2 477 Gene3D G3DSA:3.40.50.2300 240 354 4.1E-5 T 11-10-2018 AVL55_14260 f3175e4e14efa7b43101fbb0852b48c2 477 SUPERFAMILY SSF53822 212 441 8.41E-15 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 Gene3D G3DSA:1.10.150.120 89 192 4.1E-34 T 11-10-2018 AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 366 466 1.5E-22 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 SUPERFAMILY SSF54292 2 89 1.05E-16 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 Gene3D G3DSA:3.10.20.30 1 88 3.3E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 466 5.5E-165 T 11-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 75 9.9E-6 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 194 357 2.9E-47 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 PIRSF PIRSF036557 1 480 1.5E-166 T 11-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 SUPERFAMILY SSF47741 94 188 9.03E-36 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 SUPERFAMILY SSF56176 193 357 1.2E-47 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 SUPERFAMILY SSF55447 362 468 4.84E-24 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 Gene3D G3DSA:3.30.390.50 365 468 4.3E-22 T 11-10-2018 AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 SMART SM01092 365 467 9.5E-21 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 Gene3D G3DSA:3.30.465.10 194 358 1.2E-50 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AVL55_07955 f6e96dbca740ab7d8fab1abba012fce7 481 Pfam PF01799 [2Fe-2S] binding domain 86 157 2.0E-31 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AVL55_04625 d2295e9ec220c44d4f03ea4117f0639d 286 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 286 148.292 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AVL55_04625 d2295e9ec220c44d4f03ea4117f0639d 286 Gene3D G3DSA:3.30.1130.10 26 144 1.0E-41 T 11-10-2018 AVL55_04625 d2295e9ec220c44d4f03ea4117f0639d 286 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 26 136 4.1E-46 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AVL55_04625 d2295e9ec220c44d4f03ea4117f0639d 286 PIRSF PIRSF004750 11 286 1.6E-121 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AVL55_04625 d2295e9ec220c44d4f03ea4117f0639d 286 Pfam PF14489 QueF-like protein 200 275 4.2E-28 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AVL55_04625 d2295e9ec220c44d4f03ea4117f0639d 286 Gene3D G3DSA:3.30.1130.10 149 286 7.9E-59 T 11-10-2018 AVL55_04625 d2295e9ec220c44d4f03ea4117f0639d 286 SUPERFAMILY SSF55620 146 270 3.63E-10 T 11-10-2018 AVL55_04625 d2295e9ec220c44d4f03ea4117f0639d 286 TIGRFAM TIGR03138 QueF: queuine synthase 16 286 2.8E-123 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 511 541 - T 11-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 476 500 1.3E-56 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 534 554 1.3E-56 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 609 631 1.3E-56 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 523 1.3E-56 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 450 468 1.3E-56 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 605 1.3E-56 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 SUPERFAMILY SSF53474 418 679 2.07E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 Pfam PF00326 Prolyl oligopeptidase family 466 680 8.0E-63 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 8 407 6.3E-108 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 SUPERFAMILY SSF50993 3 410 5.49E-92 T 11-10-2018 AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 Gene3D G3DSA:3.40.50.1820 18 675 2.9E-251 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_11470 dad841f4502bf69cd4c5f801e086b201 680 Gene3D G3DSA:2.130.10.120 74 410 2.9E-251 T 11-10-2018 AVL55_14635 9c70912c1e811c08862bdc7047b6f428 737 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 175 675 1.4E-94 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AVL55_14635 9c70912c1e811c08862bdc7047b6f428 737 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 129 2.7E-17 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AVL55_14635 9c70912c1e811c08862bdc7047b6f428 737 SMART SM01008 23 136 1.4E-16 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AVL55_14635 9c70912c1e811c08862bdc7047b6f428 737 Gene3D G3DSA:3.30.365.10 176 385 5.0E-42 T 11-10-2018 AVL55_14635 9c70912c1e811c08862bdc7047b6f428 737 SUPERFAMILY SSF56003 174 734 3.01E-131 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AVL55_14635 9c70912c1e811c08862bdc7047b6f428 737 SUPERFAMILY SSF54665 4 131 4.45E-28 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AVL55_14635 9c70912c1e811c08862bdc7047b6f428 737 Gene3D G3DSA:3.30.365.10 187 279 5.0E-42 T 11-10-2018 AVL55_14635 9c70912c1e811c08862bdc7047b6f428 737 Gene3D G3DSA:3.30.365.20 404 737 2.1E-78 T 11-10-2018 AVL55_14635 9c70912c1e811c08862bdc7047b6f428 737 Gene3D G3DSA:3.90.1170.50 1 134 1.1E-24 T 11-10-2018 AVL55_08675 be1df0b26cf03b62a91ac31d7c42ba5b 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 2.1E-36 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AVL55_08675 be1df0b26cf03b62a91ac31d7c42ba5b 309 SUPERFAMILY SSF55048 128 198 2.88E-15 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AVL55_08675 be1df0b26cf03b62a91ac31d7c42ba5b 309 Gene3D G3DSA:3.40.366.10 7 285 3.7E-101 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AVL55_08675 be1df0b26cf03b62a91ac31d7c42ba5b 309 PIRSF PIRSF000446 1 309 3.8E-124 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AVL55_08675 be1df0b26cf03b62a91ac31d7c42ba5b 309 Pfam PF00698 Acyl transferase domain 7 284 7.3E-36 T 11-10-2018 IPR014043 Acyl transferase AVL55_08675 be1df0b26cf03b62a91ac31d7c42ba5b 309 SUPERFAMILY SSF52151 4 307 6.8E-79 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AVL55_08675 be1df0b26cf03b62a91ac31d7c42ba5b 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.2E-116 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AVL55_08675 be1df0b26cf03b62a91ac31d7c42ba5b 309 Gene3D G3DSA:3.30.70.250 124 198 3.7E-101 T 11-10-2018 AVL55_00470 d938d5b3b5f98683a996c73a48d2a68d 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 239 2.8E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AVL55_00470 d938d5b3b5f98683a996c73a48d2a68d 406 Gene3D G3DSA:1.10.540.10 1 136 4.7E-48 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AVL55_00470 d938d5b3b5f98683a996c73a48d2a68d 406 Gene3D G3DSA:1.20.140.10 252 406 3.7E-39 T 11-10-2018 AVL55_00470 d938d5b3b5f98683a996c73a48d2a68d 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 1.3E-32 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_00470 d938d5b3b5f98683a996c73a48d2a68d 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 134 2.5E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AVL55_00470 d938d5b3b5f98683a996c73a48d2a68d 406 Gene3D G3DSA:2.40.110.10 137 251 2.6E-38 T 11-10-2018 AVL55_00470 d938d5b3b5f98683a996c73a48d2a68d 406 SUPERFAMILY SSF56645 18 264 4.71E-62 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_00470 d938d5b3b5f98683a996c73a48d2a68d 406 SUPERFAMILY SSF47203 250 405 2.74E-44 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_20025 eacb26cca391eea2deec878047608828 277 ProSitePatterns PS00449 ATP synthase a subunit signature. 214 223 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20025 eacb26cca391eea2deec878047608828 277 Pfam PF00119 ATP synthase A chain 48 271 2.0E-52 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20025 eacb26cca391eea2deec878047608828 277 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 277 15.514 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20025 eacb26cca391eea2deec878047608828 277 Gene3D G3DSA:1.20.120.220 95 277 5.6E-54 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20025 eacb26cca391eea2deec878047608828 277 SUPERFAMILY SSF81336 96 271 7.06E-40 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20025 eacb26cca391eea2deec878047608828 277 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 271 1.1E-40 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_14445 473d78c02ba7637239ec2ee7ed4118f6 341 Gene3D G3DSA:1.10.260.40 1 64 2.3E-16 T 11-10-2018 AVL55_14445 473d78c02ba7637239ec2ee7ed4118f6 341 Gene3D G3DSA:3.40.50.2300 66 181 4.2E-18 T 11-10-2018 AVL55_14445 473d78c02ba7637239ec2ee7ed4118f6 341 SUPERFAMILY SSF47413 5 64 1.25E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_14445 473d78c02ba7637239ec2ee7ed4118f6 341 SUPERFAMILY SSF53822 64 329 1.52E-35 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_14445 473d78c02ba7637239ec2ee7ed4118f6 341 Pfam PF13377 Periplasmic binding protein-like domain 204 332 7.1E-21 T 11-10-2018 AVL55_14445 473d78c02ba7637239ec2ee7ed4118f6 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 1.3E-8 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_14445 473d78c02ba7637239ec2ee7ed4118f6 341 SMART SM00354 5 76 5.2E-12 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_14445 473d78c02ba7637239ec2ee7ed4118f6 341 Gene3D G3DSA:3.40.50.2300 195 320 4.0E-24 T 11-10-2018 AVL55_12530 a8f95ade161b0b93956775ee637a2b70 195 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 184 1.7E-28 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AVL55_12530 a8f95ade161b0b93956775ee637a2b70 195 PIRSF PIRSF011489 1 191 1.5E-47 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AVL55_08245 645db4a9551be4c6add56a20e2a17d86 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 5.0E-106 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AVL55_08245 645db4a9551be4c6add56a20e2a17d86 326 Gene3D G3DSA:3.30.930.10 6 326 2.7E-126 T 11-10-2018 AVL55_08245 645db4a9551be4c6add56a20e2a17d86 326 SUPERFAMILY SSF46589 13 98 1.36E-21 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AVL55_08245 645db4a9551be4c6add56a20e2a17d86 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 86 3.9E-24 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AVL55_08245 645db4a9551be4c6add56a20e2a17d86 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 163 325 5.3E-81 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AVL55_08245 645db4a9551be4c6add56a20e2a17d86 326 SUPERFAMILY SSF55681 91 326 8.16E-84 T 11-10-2018 AVL55_08245 645db4a9551be4c6add56a20e2a17d86 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 48.5 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AVL55_15105 5065a98c02b254184b00045cd9ca49ae 425 Gene3D G3DSA:2.40.30.170 52 301 5.8E-92 T 11-10-2018 AVL55_15105 5065a98c02b254184b00045cd9ca49ae 425 Gene3D G3DSA:1.10.287.470 100 173 5.8E-92 T 11-10-2018 AVL55_15105 5065a98c02b254184b00045cd9ca49ae 425 SUPERFAMILY SSF111369 55 296 1.83E-63 T 11-10-2018 AVL55_15105 5065a98c02b254184b00045cd9ca49ae 425 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 371 8.2E-79 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_15105 5065a98c02b254184b00045cd9ca49ae 425 Gene3D G3DSA:2.40.50.100 65 208 5.8E-92 T 11-10-2018 AVL55_15105 5065a98c02b254184b00045cd9ca49ae 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 291 2.8E-20 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_15105 5065a98c02b254184b00045cd9ca49ae 425 Gene3D G3DSA:2.40.420.20 302 370 5.8E-92 T 11-10-2018 AVL55_18185 69a5a009a5562fe890615e53fb6785c2 344 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 344 70.925 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_18185 69a5a009a5562fe890615e53fb6785c2 344 SUPERFAMILY SSF56176 4 193 3.15E-39 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AVL55_18185 69a5a009a5562fe890615e53fb6785c2 344 Gene3D G3DSA:3.30.43.10 3 68 1.8E-14 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AVL55_18185 69a5a009a5562fe890615e53fb6785c2 344 SUPERFAMILY SSF56194 200 338 4.97E-39 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_18185 69a5a009a5562fe890615e53fb6785c2 344 Gene3D G3DSA:3.90.78.10 217 343 8.2E-39 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_18185 69a5a009a5562fe890615e53fb6785c2 344 Pfam PF01565 FAD binding domain 37 147 1.5E-17 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AVL55_18185 69a5a009a5562fe890615e53fb6785c2 344 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 204 335 8.0E-31 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_18185 69a5a009a5562fe890615e53fb6785c2 344 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 4 337 2.7E-71 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_18185 69a5a009a5562fe890615e53fb6785c2 344 Gene3D G3DSA:3.30.465.10 69 216 3.7E-53 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Gene3D G3DSA:1.10.150.20 434 493 1.3E-20 T 11-10-2018 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Gene3D G3DSA:2.40.50.140 138 201 4.7E-18 T 11-10-2018 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 345 1.3E-123 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Pfam PF00575 S1 RNA binding domain 135 197 1.2E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 SUPERFAMILY SSF50249 135 202 1.65E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 SUPERFAMILY SSF47794 432 494 3.3E-15 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Pfam PF13184 NusA-like KH domain 233 300 3.1E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Pfam PF08529 NusA N-terminal domain 4 127 5.7E-33 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 SUPERFAMILY SSF54814 203 281 2.09E-29 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Gene3D G3DSA:3.30.300.20 202 280 8.1E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 SMART SM00316 136 203 7.6E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 SUPERFAMILY SSF69705 1 128 2.22E-36 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Gene3D G3DSA:3.30.1480.10 1 132 7.0E-40 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Gene3D G3DSA:3.30.300.20 281 347 1.8E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 SUPERFAMILY SSF54814 282 346 2.88E-15 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 491 9.4E-15 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 368 417 9.8E-22 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Pfam PF14520 Helix-hairpin-helix domain 435 489 1.6E-5 T 11-10-2018 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 413 28.673 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 Gene3D G3DSA:1.10.150.20 356 424 4.6E-27 T 11-10-2018 AVL55_08855 409eb9209900b2bc1f02f648c0ae9517 498 SUPERFAMILY SSF47794 357 419 8.16E-17 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AVL55_16915 99bf8ede9dee4835e5ba6ebab5d366e8 272 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 1 272 46.252 T 11-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 AVL55_16915 99bf8ede9dee4835e5ba6ebab5d366e8 272 Pfam PF01170 Putative RNA methylase family UPF0020 32 126 2.0E-6 T 11-10-2018 IPR000241 Putative RNA methylase domain AVL55_16915 99bf8ede9dee4835e5ba6ebab5d366e8 272 SUPERFAMILY SSF53335 7 181 1.74E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_16915 99bf8ede9dee4835e5ba6ebab5d366e8 272 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AVL55_16915 99bf8ede9dee4835e5ba6ebab5d366e8 272 Gene3D G3DSA:3.40.50.150 1 267 5.9E-54 T 11-10-2018 AVL55_20085 52e6d0415296249ddde79dd954916b9a 119 Gene3D G3DSA:3.30.230.10 2 118 4.9E-38 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_20085 52e6d0415296249ddde79dd954916b9a 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AVL55_20085 52e6d0415296249ddde79dd954916b9a 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 38 107 7.0E-22 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AVL55_20085 52e6d0415296249ddde79dd954916b9a 119 Pfam PF00825 Ribonuclease P 6 112 1.9E-28 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AVL55_20085 52e6d0415296249ddde79dd954916b9a 119 SUPERFAMILY SSF54211 6 114 3.79E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_20085 52e6d0415296249ddde79dd954916b9a 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 7.4E-27 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AVL55_20085 52e6d0415296249ddde79dd954916b9a 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 16.67 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AVL55_05560 0d855c91bc536721e02a251a984b9a1e 302 SUPERFAMILY SSF51679 41 301 2.94E-49 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AVL55_05560 0d855c91bc536721e02a251a984b9a1e 302 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 6 300 1.3E-97 T 11-10-2018 IPR020020 Luciferase-type oxidoreductase AVL55_05560 0d855c91bc536721e02a251a984b9a1e 302 Gene3D G3DSA:3.20.20.30 3 302 4.7E-70 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AVL55_05560 0d855c91bc536721e02a251a984b9a1e 302 Pfam PF00296 Luciferase-like monooxygenase 36 232 7.0E-29 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 Pfam PF04055 Radical SAM superfamily 175 352 6.3E-31 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 Gene3D G3DSA:3.40.50.12160 37 164 2.1E-30 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 SMART SM00729 169 394 1.9E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 173 193 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 SUPERFAMILY SSF102114 133 399 8.76E-55 T 11-10-2018 AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 Gene3D G3DSA:2.40.50.140 409 477 2.1E-15 T 11-10-2018 AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 38 466 7.8E-180 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 Pfam PF00919 Uncharacterized protein family UPF0004 38 129 9.0E-22 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 Gene3D G3DSA:3.80.30.20 167 408 1.6E-74 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 37 469 61.813 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AVL55_09525 db9975409463c7ba14c3be21337fb3a0 482 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 39 466 2.2E-103 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AVL55_02995 df5245d7a52a3ec35ff2a50b33e9e2e6 469 Pfam PF13379 NMT1-like family 44 323 2.6E-105 T 11-10-2018 AVL55_02995 df5245d7a52a3ec35ff2a50b33e9e2e6 469 Gene3D G3DSA:3.40.190.10 135 452 1.6E-139 T 11-10-2018 AVL55_02995 df5245d7a52a3ec35ff2a50b33e9e2e6 469 SUPERFAMILY SSF53850 46 310 1.3E-17 T 11-10-2018 AVL55_02995 df5245d7a52a3ec35ff2a50b33e9e2e6 469 Gene3D G3DSA:3.40.190.10 50 447 1.6E-139 T 11-10-2018 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 Pfam PF00072 Response regulator receiver domain 3 114 2.9E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.7E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.7E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.7E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 SMART SM00448 1 114 5.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 SUPERFAMILY SSF46894 138 204 1.12E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 Gene3D G3DSA:3.40.50.12740 1 203 4.0E-49 T 11-10-2018 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 SMART SM00421 140 197 7.1E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 1.9E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16530 c5330dae92f697e2c336ef1baba77415 218 SUPERFAMILY SSF52172 1 126 7.68E-25 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 Pfam PF13437 HlyD family secretion protein 209 317 1.5E-13 T 11-10-2018 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 Gene3D G3DSA:1.10.287.470 179 209 2.7E-16 T 11-10-2018 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 Pfam PF13533 Biotin-lipoyl like 45 89 1.2E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 Gene3D G3DSA:1.10.287.470 116 171 3.7E-5 T 11-10-2018 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 SUPERFAMILY SSF111369 179 259 3.27E-8 T 11-10-2018 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 Gene3D G3DSA:2.40.30.170 245 318 2.7E-16 T 11-10-2018 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 323 338 2.1E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 54 74 2.1E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 Gene3D G3DSA:2.40.50.100 210 244 2.7E-16 T 11-10-2018 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 Gene3D G3DSA:2.40.50.100 42 75 8.7E-15 T 11-10-2018 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 Gene3D G3DSA:1.10.287.470 76 115 8.7E-15 T 11-10-2018 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 SUPERFAMILY SSF111369 112 172 2.62E-6 T 11-10-2018 AVL55_04225 0af10920ae1b3438f7785de6b5fac6b0 350 SUPERFAMILY SSF111369 36 108 7.06E-8 T 11-10-2018 AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 244 1.4E-27 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 SMART SM00062 28 247 5.0E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 SMART SM00267 299 466 5.7E-13 T 11-10-2018 IPR000160 GGDEF domain AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 SUPERFAMILY SSF53850 29 246 5.43E-39 T 11-10-2018 AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 SUPERFAMILY SSF55073 316 465 9.42E-23 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 Gene3D G3DSA:3.40.190.10 112 206 3.0E-51 T 11-10-2018 AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 Gene3D G3DSA:3.30.70.270 296 465 1.1E-27 T 11-10-2018 AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 307 466 2.3E-23 T 11-10-2018 IPR000160 GGDEF domain AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 Gene3D G3DSA:3.40.190.10 25 243 3.0E-51 T 11-10-2018 AVL55_08440 2f459c674ef05736f353fdafe3ab26a0 467 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 459 3.5E-19 T 11-10-2018 IPR000160 GGDEF domain AVL55_12115 95eb737f27dee0c5c5dfe32612f670d4 283 SUPERFAMILY SSF74650 7 280 3.45E-59 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AVL55_12115 95eb737f27dee0c5c5dfe32612f670d4 283 Pfam PF01263 Aldose 1-epimerase 22 279 3.9E-34 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AVL55_12115 95eb737f27dee0c5c5dfe32612f670d4 283 PIRSF PIRSF016020 1 283 2.1E-49 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AVL55_12115 95eb737f27dee0c5c5dfe32612f670d4 283 Gene3D G3DSA:2.70.98.10 3 282 8.1E-72 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AVL55_04560 c61864924448321033dcd220df0de82d 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 178 197 6.5E-15 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_04560 c61864924448321033dcd220df0de82d 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 198 217 6.5E-15 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_04560 c61864924448321033dcd220df0de82d 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 141 165 6.5E-15 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_04560 c61864924448321033dcd220df0de82d 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 33 54 6.5E-15 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_04560 c61864924448321033dcd220df0de82d 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 107 132 6.5E-15 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_04560 c61864924448321033dcd220df0de82d 259 Pfam PF01061 ABC-2 type transporter 15 221 1.5E-20 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AVL55_04560 c61864924448321033dcd220df0de82d 259 PIRSF PIRSF006648 3 256 1.5E-14 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_18660 2c61c7edad369e362ba7d39707c03a9c 133 SUPERFAMILY SSF54995 1 104 6.54E-37 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18660 2c61c7edad369e362ba7d39707c03a9c 133 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.102 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AVL55_18660 2c61c7edad369e362ba7d39707c03a9c 133 Pfam PF01250 Ribosomal protein S6 3 91 3.3E-26 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18660 2c61c7edad369e362ba7d39707c03a9c 133 Gene3D G3DSA:3.30.70.60 1 92 1.3E-31 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AVL55_18660 2c61c7edad369e362ba7d39707c03a9c 133 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 4.0E-34 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 Gene3D G3DSA:3.50.50.60 233 358 4.1E-79 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 SUPERFAMILY SSF50022 1 102 6.81E-24 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 Pfam PF14759 Reductase C-terminal 443 504 8.0E-6 T 11-10-2018 IPR028202 Reductase, C-terminal AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 145 1.2E-7 T 11-10-2018 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 290 1.2E-7 T 11-10-2018 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 390 397 1.2E-7 T 11-10-2018 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 123 418 1.0E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 Gene3D G3DSA:2.102.10.10 2 111 2.3E-24 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 SUPERFAMILY SSF55424 436 501 1.02E-14 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 Pfam PF00355 Rieske [2Fe-2S] domain 7 88 1.8E-14 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 SUPERFAMILY SSF51905 119 312 1.79E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 SUPERFAMILY SSF51905 265 429 6.69E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 220 238 1.0E-11 T 11-10-2018 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 124 143 1.0E-11 T 11-10-2018 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 367 1.0E-11 T 11-10-2018 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 375 397 1.0E-11 T 11-10-2018 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 283 1.0E-11 T 11-10-2018 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 Gene3D G3DSA:3.30.390.30 443 518 5.0E-8 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_16560 455745121afb5d26a77bc38fe1483c47 521 Gene3D G3DSA:3.50.50.60 124 426 4.1E-79 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_07125 26a757aedd1cb69cf784209d3a6ce5e1 322 Pfam PF04055 Radical SAM superfamily 16 175 1.3E-24 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_07125 26a757aedd1cb69cf784209d3a6ce5e1 322 SMART SM00729 11 216 2.4E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AVL55_07125 26a757aedd1cb69cf784209d3a6ce5e1 322 Pfam PF13353 4Fe-4S single cluster domain 18 120 3.7E-9 T 11-10-2018 AVL55_07125 26a757aedd1cb69cf784209d3a6ce5e1 322 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 322 1.4E-98 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_07125 26a757aedd1cb69cf784209d3a6ce5e1 322 SUPERFAMILY SSF102114 4 275 3.27E-68 T 11-10-2018 AVL55_07125 26a757aedd1cb69cf784209d3a6ce5e1 322 Pfam PF06463 Molybdenum Cofactor Synthesis C 181 305 1.5E-32 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_07125 26a757aedd1cb69cf784209d3a6ce5e1 322 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 2 322 35.265 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_07125 26a757aedd1cb69cf784209d3a6ce5e1 322 Gene3D G3DSA:3.20.20.70 1 322 1.2E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07125 26a757aedd1cb69cf784209d3a6ce5e1 322 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 SUPERFAMILY SSF55347 615 798 7.85E-51 T 11-10-2018 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 Pfam PF00742 Homoserine dehydrogenase 615 811 4.2E-49 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 SUPERFAMILY SSF55021 306 381 1.26E-20 T 11-10-2018 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 SUPERFAMILY SSF55021 383 475 8.01E-23 T 11-10-2018 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 Gene3D G3DSA:3.30.360.10 626 796 3.5E-119 T 11-10-2018 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 Gene3D G3DSA:1.20.120.1320 41 142 5.0E-80 T 11-10-2018 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 SUPERFAMILY SSF53633 1 298 2.09E-70 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.1E-122 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 SUPERFAMILY SSF51735 464 637 7.88E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 661 683 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 607 7.1E-25 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 Gene3D G3DSA:3.40.1160.10 3 295 5.0E-80 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 Pfam PF01842 ACT domain 324 380 6.3E-8 T 11-10-2018 IPR002912 ACT domain AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 Gene3D G3DSA:3.40.50.720 466 812 3.5E-119 T 11-10-2018 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 Gene3D G3DSA:3.30.2130.10 304 464 2.4E-48 T 11-10-2018 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 Pfam PF00696 Amino acid kinase family 2 284 4.0E-42 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AVL55_15530 72ec3efa55718fefd61490f905a4286c 821 PIRSF PIRSF000727 1 818 0.0 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 Pfam PF00702 haloacid dehalogenase-like hydrolase 397 614 5.3E-42 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 168 701 6.6E-129 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 403 409 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 250 264 2.7E-29 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 549 559 2.7E-29 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 635 2.7E-29 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 527 538 2.7E-29 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 600 619 2.7E-29 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 401 415 2.7E-29 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 Gene3D G3DSA:3.40.50.1000 382 652 5.0E-85 T 11-10-2018 IPR023214 HAD superfamily AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 149 487 4.3E-102 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 SUPERFAMILY SSF56784 399 700 1.46E-49 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 Pfam PF00403 Heavy-metal-associated domain 2 61 1.2E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 SUPERFAMILY SSF81665 152 694 1.06E-17 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 SUPERFAMILY SSF81653 204 300 3.27E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00941 Cadmium-transporting ATPase signature 184 204 9.6E-16 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00941 Cadmium-transporting ATPase signature 1 10 9.6E-16 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00941 Cadmium-transporting ATPase signature 285 299 9.6E-16 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00941 Cadmium-transporting ATPase signature 266 282 9.6E-16 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 PRINTS PR00941 Cadmium-transporting ATPase signature 12 33 9.6E-16 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 ProSitePatterns PS01047 Heavy-metal-associated domain. 3 32 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 Gene3D G3DSA:3.30.70.100 1 65 5.5E-15 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 Gene3D G3DSA:3.40.1110.10 412 534 5.0E-85 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 172 679 1.6E-85 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 149 702 2.3E-186 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 Pfam PF00122 E1-E2 ATPase 200 380 2.3E-53 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 Gene3D G3DSA:2.70.150.20 193 305 3.9E-36 T 11-10-2018 AVL55_05910 9b232f867f94e9827e2c0ee1b8dd63f5 729 SUPERFAMILY SSF55008 1 64 6.81E-14 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_18110 32df40b06ba82e2c56e4575eb1d44330 128 Pfam PF01618 MotA/TolQ/ExbB proton channel family 38 125 1.8E-15 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 163 4.4E-78 T 11-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 227 240 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 SUPERFAMILY SSF56784 3 159 1.76E-40 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 Gene3D G3DSA:3.30.230.40 256 356 2.6E-33 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 3 356 49.927 T 11-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 197 338 5.8E-63 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 146 1.5E-47 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 168 356 36.162 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 Gene3D G3DSA:3.40.50.1000 1 163 8.7E-47 T 11-10-2018 IPR023214 HAD superfamily AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 Pfam PF08645 Polynucleotide kinase 3 phosphatase 7 132 3.3E-6 T 11-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 SUPERFAMILY SSF54211 253 343 3.67E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 150 4.5E-27 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 SUPERFAMILY SSF54211 168 252 3.67E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_13025 bcccf4ec5ab57d82059d33806777b4d0 356 Gene3D G3DSA:3.30.230.40 164 255 7.2E-36 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 Gene3D G3DSA:1.10.40.30 403 457 4.9E-18 T 11-10-2018 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 Pfam PF10415 Fumarase C C-terminus 403 455 9.3E-18 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 Gene3D G3DSA:1.20.200.10 134 400 2.6E-92 T 11-10-2018 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 SUPERFAMILY SSF48557 2 451 4.86E-132 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 457 71.621 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 Pfam PF00206 Lyase 12 337 2.9E-90 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 3.5E-28 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 3.5E-28 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 3.5E-28 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 3.5E-28 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.3E-6 T 11-10-2018 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.3E-6 T 11-10-2018 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.3E-6 T 11-10-2018 AVL55_15935 71c58ac24124eaa725cf9e6601d4606b 457 Gene3D G3DSA:1.10.275.10 5 133 3.8E-52 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AVL55_07065 6ad16111baca298978ad8b1aed40943d 158 SUPERFAMILY SSF52788 3 152 4.84E-52 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AVL55_07065 6ad16111baca298978ad8b1aed40943d 158 SMART SM00226 5 151 1.9E-54 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AVL55_07065 6ad16111baca298978ad8b1aed40943d 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 82 97 8.9E-25 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AVL55_07065 6ad16111baca298978ad8b1aed40943d 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 8.9E-25 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AVL55_07065 6ad16111baca298978ad8b1aed40943d 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 8.9E-25 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AVL55_07065 6ad16111baca298978ad8b1aed40943d 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 48 64 8.9E-25 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AVL55_07065 6ad16111baca298978ad8b1aed40943d 158 Gene3D G3DSA:3.40.50.2300 5 158 5.7E-59 T 11-10-2018 AVL55_07065 6ad16111baca298978ad8b1aed40943d 158 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 148 3.5E-43 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AVL55_08295 07ae0345a0cd9c0da31241b9547c1d99 583 Pfam PF10972 Peptidoglycan-binding protein, CsiV 13 576 3.1E-53 T 11-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV AVL55_08560 83ca07035eb877fe0f4f0bf01995c336 408 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 407 3.1E-118 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AVL55_08560 83ca07035eb877fe0f4f0bf01995c336 408 Pfam PF12704 MacB-like periplasmic core domain 27 207 3.2E-7 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AVL55_08560 83ca07035eb877fe0f4f0bf01995c336 408 Pfam PF02687 FtsX-like permease family 297 403 1.8E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 251 2.4E-75 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 SUPERFAMILY SSF53067 254 490 5.38E-79 T 11-10-2018 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 Gene3D G3DSA:3.30.420.40 253 492 2.1E-86 T 11-10-2018 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 SUPERFAMILY SSF53067 4 254 4.97E-91 T 11-10-2018 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 448 6.0E-57 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 Gene3D G3DSA:3.30.420.40 1 252 2.3E-103 T 11-10-2018 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 Hamap MF_00186 Glycerol kinase [glpK]. 2 494 53.351 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 490 3.2E-218 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AVL55_01035 1eddb47f83790098b136f68bb455af24 494 PIRSF PIRSF000538 2 493 2.2E-169 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 112 3.0E-31 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 681 2.2E-249 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 Gene3D G3DSA:3.30.870.10 323 503 7.9E-67 T 11-10-2018 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 Gene3D G3DSA:1.20.58.310 9 112 1.8E-32 T 11-10-2018 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 SUPERFAMILY SSF56024 504 686 1.05E-68 T 11-10-2018 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 SUPERFAMILY SSF56024 320 499 6.59E-51 T 11-10-2018 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 SUPERFAMILY SSF140356 6 109 3.4E-29 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 Gene3D G3DSA:3.30.1840.10 113 311 1.0E-60 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 SUPERFAMILY SSF143724 110 316 5.49E-56 T 11-10-2018 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 Pfam PF02503 Polyphosphate kinase middle domain 122 322 2.6E-38 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 Gene3D G3DSA:3.30.870.10 504 690 5.1E-74 T 11-10-2018 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 685 26.381 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 Pfam PF13090 Polyphosphate kinase C-terminal domain 334 680 5.8E-141 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AVL55_03995 064f8eaf819600203d3be641a1d640c5 690 PIRSF PIRSF015589 1 689 9.7E-236 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AVL55_16640 8c4fbf99e92aead57d280a8d5c82a008 391 Gene3D G3DSA:3.40.640.10 65 287 3.0E-80 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_16640 8c4fbf99e92aead57d280a8d5c82a008 391 Pfam PF00155 Aminotransferase class I and II 51 376 2.4E-43 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_16640 8c4fbf99e92aead57d280a8d5c82a008 391 SUPERFAMILY SSF53383 46 381 4.21E-64 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_16640 8c4fbf99e92aead57d280a8d5c82a008 391 Gene3D G3DSA:3.90.1150.10 49 367 3.0E-80 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_00355 791ced1e519d558335e7f01bb2dfa0f2 671 Gene3D G3DSA:1.10.486.10 377 540 3.2E-121 T 11-10-2018 AVL55_00355 791ced1e519d558335e7f01bb2dfa0f2 671 Gene3D G3DSA:1.10.10.160 108 181 3.8E-93 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AVL55_00355 791ced1e519d558335e7f01bb2dfa0f2 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.1E-73 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AVL55_00355 791ced1e519d558335e7f01bb2dfa0f2 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 39.353 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AVL55_00355 791ced1e519d558335e7f01bb2dfa0f2 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AVL55_00355 791ced1e519d558335e7f01bb2dfa0f2 671 Gene3D G3DSA:3.40.50.300 275 633 3.2E-121 T 11-10-2018 AVL55_00355 791ced1e519d558335e7f01bb2dfa0f2 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 614 4.1E-68 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AVL55_00355 791ced1e519d558335e7f01bb2dfa0f2 671 SUPERFAMILY SSF52540 1 640 2.79E-158 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00355 791ced1e519d558335e7f01bb2dfa0f2 671 Gene3D G3DSA:3.40.50.300 4 266 3.8E-93 T 11-10-2018 AVL55_03215 c97b1e6e241007afdf66071dafaa0092 882 SUPERFAMILY SSF56935 39 882 5.86E-66 T 11-10-2018 AVL55_03215 c97b1e6e241007afdf66071dafaa0092 882 Gene3D G3DSA:2.40.170.20 323 882 4.8E-26 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_03215 c97b1e6e241007afdf66071dafaa0092 882 Gene3D G3DSA:2.170.130.10 29 164 4.0E-7 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_03215 c97b1e6e241007afdf66071dafaa0092 882 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 152 1.3E-6 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_03215 c97b1e6e241007afdf66071dafaa0092 882 Pfam PF00593 TonB dependent receptor 424 854 5.7E-19 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 SUPERFAMILY SSF53448 2 249 1.15E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.484 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 315 347 8.6E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 297 1.2E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 Pfam PF12804 MobA-like NTP transferase domain 5 126 9.3E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 Gene3D G3DSA:2.160.10.10 225 452 1.6E-67 T 11-10-2018 AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 425 1.3E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 SUPERFAMILY SSF51161 252 435 5.61E-50 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 Gene3D G3DSA:3.90.550.10 2 224 8.5E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_18970 955bbab56ab8e1e0c284759a876811e4 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 7.5E-195 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AVL55_13475 63e5ae69dba379e978ae27d026007e66 348 Gene3D G3DSA:2.40.30.160 210 327 3.6E-33 T 11-10-2018 AVL55_13475 63e5ae69dba379e978ae27d026007e66 348 Gene3D G3DSA:3.30.70.1400 22 106 1.5E-18 T 11-10-2018 AVL55_13475 63e5ae69dba379e978ae27d026007e66 348 SUPERFAMILY SSF101790 256 337 8.5E-18 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AVL55_13475 63e5ae69dba379e978ae27d026007e66 348 Pfam PF01571 Aminomethyltransferase folate-binding domain 19 112 7.3E-8 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AVL55_13475 63e5ae69dba379e978ae27d026007e66 348 PIRSF PIRSF006487 12 296 2.7E-10 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AVL55_13475 63e5ae69dba379e978ae27d026007e66 348 SUPERFAMILY SSF103025 10 255 3.53E-41 T 11-10-2018 AVL55_13475 63e5ae69dba379e978ae27d026007e66 348 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 201 264 5.4E-21 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 Gene3D G3DSA:1.10.579.10 289 474 6.4E-85 T 11-10-2018 AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 PRINTS PR00147 DNA photolyase signature 320 336 9.9E-22 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 PRINTS PR00147 DNA photolyase signature 340 358 9.9E-22 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 PRINTS PR00147 DNA photolyase signature 379 393 9.9E-22 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 PRINTS PR00147 DNA photolyase signature 138 154 9.9E-22 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 Gene3D G3DSA:3.40.50.620 7 201 6.1E-88 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 SUPERFAMILY SSF48173 190 473 3.79E-115 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 SUPERFAMILY SSF52425 5 172 5.23E-55 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 320 332 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 Gene3D G3DSA:1.25.40.80 129 282 6.1E-88 T 11-10-2018 AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 Pfam PF00875 DNA photolyase 6 160 4.0E-44 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AVL55_10670 08c6f1e537f53afba749bdcb18fb0f77 474 Pfam PF03441 FAD binding domain of DNA photolyase 271 470 3.5E-89 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AVL55_14200 f0322377baa7ff793af39384e624ff31 749 Pfam PF09317 Domain of unknown function (DUF1974) 444 726 3.3E-79 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AVL55_14200 f0322377baa7ff793af39384e624ff31 749 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 70 162 4.6E-13 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AVL55_14200 f0322377baa7ff793af39384e624ff31 749 Gene3D G3DSA:1.10.540.10 53 165 7.9E-91 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AVL55_14200 f0322377baa7ff793af39384e624ff31 749 Gene3D G3DSA:2.40.110.10 166 289 7.9E-91 T 11-10-2018 AVL55_14200 f0322377baa7ff793af39384e624ff31 749 Gene3D G3DSA:1.20.140.10 290 435 7.9E-91 T 11-10-2018 AVL55_14200 f0322377baa7ff793af39384e624ff31 749 SUPERFAMILY SSF47203 290 445 5.8E-23 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_14200 f0322377baa7ff793af39384e624ff31 749 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 434 6.4E-13 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_14200 f0322377baa7ff793af39384e624ff31 749 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 167 267 1.5E-10 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AVL55_14200 f0322377baa7ff793af39384e624ff31 749 SUPERFAMILY SSF56645 48 285 8.25E-46 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 4.7E-71 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 4.7E-71 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.7E-71 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.7E-71 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 4.7E-71 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.7E-71 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 4.7E-71 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 4.7E-71 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 4.7E-71 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 Gene3D G3DSA:3.30.390.30 344 465 2.5E-45 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.2E-61 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 452 9.4E-38 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 2.0E-39 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 2.0E-39 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.0E-39 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.0E-39 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.0E-39 T 11-10-2018 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 PIRSF PIRSF000350 1 466 1.3E-88 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 SUPERFAMILY SSF55424 341 463 4.12E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 Gene3D G3DSA:3.50.50.60 149 269 4.6E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15115 1aba8675ff5850672b831c868855ab95 473 SUPERFAMILY SSF51905 7 379 4.41E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15115 1aba8675ff5850672b831c868855ab95 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 454 4.9E-151 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AVL55_15115 1aba8675ff5850672b831c868855ab95 473 Gene3D G3DSA:3.50.50.60 8 330 4.6E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_13300 f24bad84ed81c11083afcf68937467b7 309 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 3.7E-18 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain AVL55_13300 f24bad84ed81c11083afcf68937467b7 309 Pfam PF00691 OmpA family 188 287 1.3E-14 T 11-10-2018 IPR006665 OmpA-like domain AVL55_13300 f24bad84ed81c11083afcf68937467b7 309 SUPERFAMILY SSF103088 175 293 9.16E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_13300 f24bad84ed81c11083afcf68937467b7 309 Gene3D G3DSA:3.30.1330.60 146 295 4.5E-43 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_03985 749a4da243902636f4667408de0aff6c 708 Pfam PF00326 Prolyl oligopeptidase family 489 695 3.3E-45 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_03985 749a4da243902636f4667408de0aff6c 708 Gene3D G3DSA:2.120.10.30 175 387 2.7E-28 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_03985 749a4da243902636f4667408de0aff6c 708 Gene3D G3DSA:3.40.50.1820 397 698 4.1E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_03985 749a4da243902636f4667408de0aff6c 708 Gene3D G3DSA:2.140.10.30 44 174 3.9E-9 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AVL55_03985 749a4da243902636f4667408de0aff6c 708 Pfam PF07676 WD40-like Beta Propeller Repeat 103 138 4.2E-9 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_03985 749a4da243902636f4667408de0aff6c 708 Pfam PF07676 WD40-like Beta Propeller Repeat 157 171 0.0042 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_03985 749a4da243902636f4667408de0aff6c 708 SUPERFAMILY SSF82171 58 427 4.45E-50 T 11-10-2018 AVL55_03985 749a4da243902636f4667408de0aff6c 708 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 218 305 1.7E-9 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AVL55_03985 749a4da243902636f4667408de0aff6c 708 SUPERFAMILY SSF53474 443 695 5.36E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 5.0E-237 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.6E-85 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 SUPERFAMILY SSF56059 83 346 9.02E-71 T 11-10-2018 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 Gene3D G3DSA:3.30.1490.20 131 203 2.1E-155 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 SUPERFAMILY SSF51246 331 444 2.09E-43 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 SMART SM00878 336 441 4.5E-63 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.7E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 5.8E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 SUPERFAMILY SSF52440 1 113 1.29E-45 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 Gene3D G3DSA:3.40.50.20 1 85 1.8E-34 T 11-10-2018 AVL55_19185 aaf8500e6b54920f05c9edca5037845d 447 Gene3D G3DSA:3.30.470.20 87 432 2.1E-155 T 11-10-2018 AVL55_14905 c71abb9f0983216e25c147858696f657 154 SMART SM00988 1 65 1.6E-15 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal AVL55_14905 c71abb9f0983216e25c147858696f657 154 Pfam PF02814 UreE urease accessory protein, N-terminal domain 12 65 2.5E-10 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal AVL55_14905 c71abb9f0983216e25c147858696f657 154 PIRSF PIRSF036402 3 153 8.1E-35 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AVL55_14905 c71abb9f0983216e25c147858696f657 154 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 152 6.7E-26 T 11-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 AVL55_14905 c71abb9f0983216e25c147858696f657 154 Gene3D G3DSA:2.60.260.20 1 69 1.4E-16 T 11-10-2018 AVL55_14905 c71abb9f0983216e25c147858696f657 154 SUPERFAMILY SSF69287 1 67 4.58E-12 T 11-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily AVL55_14905 c71abb9f0983216e25c147858696f657 154 Hamap MF_00822 Urease accessory protein UreE [ureE]. 6 139 21.49 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AVL55_14905 c71abb9f0983216e25c147858696f657 154 SUPERFAMILY SSF69737 72 138 6.93E-19 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 AVL55_14905 c71abb9f0983216e25c147858696f657 154 Gene3D G3DSA:3.30.70.790 72 142 5.5E-27 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 AVL55_03340 4dadbeb0398b0971b509bc56a4a5db37 750 Pfam PF03968 OstA-like protein 59 187 9.5E-11 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AVL55_03340 4dadbeb0398b0971b509bc56a4a5db37 750 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 728 19.812 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AVL55_03340 4dadbeb0398b0971b509bc56a4a5db37 750 Pfam PF04453 Organic solvent tolerance protein 299 659 1.8E-93 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 SMART SM00962 100 296 5.0E-115 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.1E-74 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 SUPERFAMILY SSF52540 42 352 2.41E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.7E-21 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 Gene3D G3DSA:1.20.120.140 4 305 1.4E-122 T 11-10-2018 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.178 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 SMART SM00963 1 86 1.4E-34 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 Gene3D G3DSA:3.40.50.300 90 285 1.4E-122 T 11-10-2018 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 Pfam PF02978 Signal peptide binding domain 329 427 1.2E-34 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.8E-176 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 SMART SM00382 99 247 2.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 Gene3D G3DSA:1.10.260.30 328 451 5.8E-45 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AVL55_06630 1729886cca1d7146d32d9d826a421cc0 479 SUPERFAMILY SSF47446 298 431 2.62E-46 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AVL55_02215 b4094c5882a05efc905370e56f080965 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 7.9E-22 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_02215 b4094c5882a05efc905370e56f080965 421 Gene3D G3DSA:1.10.720.10 1 47 1.1E-23 T 11-10-2018 AVL55_02215 b4094c5882a05efc905370e56f080965 421 SUPERFAMILY SSF68912 1 46 3.92E-13 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AVL55_02215 b4094c5882a05efc905370e56f080965 421 SMART SM00959 5 47 1.8E-19 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AVL55_02215 b4094c5882a05efc905370e56f080965 421 SMART SM00382 170 355 6.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_02215 b4094c5882a05efc905370e56f080965 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 4.0E-218 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AVL55_02215 b4094c5882a05efc905370e56f080965 421 Gene3D G3DSA:3.40.50.300 130 417 6.2E-132 T 11-10-2018 AVL55_02215 b4094c5882a05efc905370e56f080965 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.12 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AVL55_02215 b4094c5882a05efc905370e56f080965 421 Gene3D G3DSA:2.40.50.140 48 117 2.5E-34 T 11-10-2018 AVL55_02215 b4094c5882a05efc905370e56f080965 421 SMART SM00357 52 118 8.5E-17 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AVL55_02215 b4094c5882a05efc905370e56f080965 421 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.3E-31 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AVL55_02215 b4094c5882a05efc905370e56f080965 421 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.3E-18 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AVL55_02215 b4094c5882a05efc905370e56f080965 421 SUPERFAMILY SSF50249 48 125 9.71E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_02215 b4094c5882a05efc905370e56f080965 421 SUPERFAMILY SSF52540 90 371 1.11E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07555 309f53abfe67da82e602cfebf565c173 218 Pfam PF12973 ChrR Cupin-like domain 126 211 1.3E-32 T 11-10-2018 IPR025979 ChrR-like cupin domain AVL55_07555 309f53abfe67da82e602cfebf565c173 218 Pfam PF12973 ChrR Cupin-like domain 18 108 2.9E-40 T 11-10-2018 IPR025979 ChrR-like cupin domain AVL55_07555 309f53abfe67da82e602cfebf565c173 218 SUPERFAMILY SSF51182 2 128 3.13E-34 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_07555 309f53abfe67da82e602cfebf565c173 218 Gene3D G3DSA:2.60.120.10 1 158 4.0E-63 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_07555 309f53abfe67da82e602cfebf565c173 218 SUPERFAMILY SSF51182 118 216 6.61E-26 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_00075 626e36f7c12b9d888bf205ca255aa765 217 Pfam PF01965 DJ-1/PfpI family 13 190 2.7E-6 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AVL55_00075 626e36f7c12b9d888bf205ca255aa765 217 SUPERFAMILY SSF52317 1 216 8.62E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_00075 626e36f7c12b9d888bf205ca255aa765 217 PIRSF PIRSF006320 1 217 8.4E-102 T 11-10-2018 IPR026041 Glyoxalase ElbB AVL55_00075 626e36f7c12b9d888bf205ca255aa765 217 Gene3D G3DSA:3.40.50.880 1 217 9.2E-87 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 Gene3D G3DSA:3.40.50.300 217 415 1.5E-61 T 11-10-2018 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 Pfam PF00270 DEAD/DEAH box helicase 35 193 3.1E-23 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 23 470 1.8E-171 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 22 607 2.4E-244 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 Pfam PF16124 RecQ zinc-binding 349 410 3.6E-14 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 Pfam PF00271 Helicase conserved C-terminal domain 236 336 6.6E-21 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 SMART SM00341 535 613 2.2E-16 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 SUPERFAMILY SSF47819 535 611 7.41E-25 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 SMART SM00490 256 337 8.2E-28 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 Pfam PF00570 HRDC domain 540 605 3.3E-21 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 SUPERFAMILY SSF52540 72 358 3.01E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 Pfam PF09382 RQC domain 412 521 8.9E-34 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 Gene3D G3DSA:1.10.10.10 416 530 7.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 SMART SM00956 417 520 5.3E-45 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 SMART SM00487 29 225 4.1E-34 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 Gene3D G3DSA:1.10.150.80 531 613 3.6E-25 T 11-10-2018 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 Gene3D G3DSA:3.40.50.300 11 215 1.9E-80 T 11-10-2018 AVL55_00780 aefcc7d3af64d6836f0adf7f185971a7 613 SUPERFAMILY SSF46785 408 529 7.62E-39 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.0E-12 T 11-10-2018 AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 5.0E-12 T 11-10-2018 AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.0E-12 T 11-10-2018 AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 5.0E-12 T 11-10-2018 AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 SUPERFAMILY SSF51905 2 339 1.95E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 334 6.8E-63 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-5 T 11-10-2018 AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.1E-5 T 11-10-2018 AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.1E-5 T 11-10-2018 AVL55_18855 02a7d8a7037c5c0deb1d4c1ce53948d1 430 Gene3D G3DSA:3.50.50.100 1 411 8.4E-114 T 11-10-2018 AVL55_08875 4437f6e1cf123996fc1425935c133338 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.461 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08875 4437f6e1cf123996fc1425935c133338 89 Pfam PF00312 Ribosomal protein S15 9 88 1.1E-36 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_08875 4437f6e1cf123996fc1425935c133338 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_08875 4437f6e1cf123996fc1425935c133338 89 SMART SM01387 8 88 7.3E-51 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_08875 4437f6e1cf123996fc1425935c133338 89 Gene3D G3DSA:1.10.287.10 2 89 1.9E-35 T 11-10-2018 AVL55_08875 4437f6e1cf123996fc1425935c133338 89 SUPERFAMILY SSF47060 3 89 6.18E-35 T 11-10-2018 IPR009068 S15/NS1, RNA-binding AVL55_08875 4437f6e1cf123996fc1425935c133338 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.5E-38 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08875 4437f6e1cf123996fc1425935c133338 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 6.0E-37 T 11-10-2018 AVL55_16625 7536edfce079429a75313582e27d6f4e 326 Pfam PF03466 LysR substrate binding domain 88 288 6.9E-22 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_16625 7536edfce079429a75313582e27d6f4e 326 Gene3D G3DSA:1.10.10.10 1 92 3.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16625 7536edfce079429a75313582e27d6f4e 326 SUPERFAMILY SSF46785 3 86 2.37E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_16625 7536edfce079429a75313582e27d6f4e 326 Gene3D G3DSA:3.40.190.10 93 284 2.5E-24 T 11-10-2018 AVL55_16625 7536edfce079429a75313582e27d6f4e 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_16625 7536edfce079429a75313582e27d6f4e 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_16625 7536edfce079429a75313582e27d6f4e 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_16625 7536edfce079429a75313582e27d6f4e 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_16625 7536edfce079429a75313582e27d6f4e 326 Gene3D G3DSA:3.40.190.10 165 275 2.5E-24 T 11-10-2018 AVL55_16625 7536edfce079429a75313582e27d6f4e 326 SUPERFAMILY SSF53850 90 303 3.54E-22 T 11-10-2018 AVL55_00895 cc83ccf6e61233b28167a2ff9781472f 310 PIRSF PIRSF001365 176 310 4.0E-9 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_00895 cc83ccf6e61233b28167a2ff9781472f 310 PIRSF PIRSF001365 1 171 5.3E-35 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_00895 cc83ccf6e61233b28167a2ff9781472f 310 SMART SM01130 1 308 3.9E-53 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_00895 cc83ccf6e61233b28167a2ff9781472f 310 Gene3D G3DSA:3.20.20.70 1 309 6.1E-69 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_00895 cc83ccf6e61233b28167a2ff9781472f 310 SUPERFAMILY SSF51569 2 307 2.51E-55 T 11-10-2018 AVL55_00895 cc83ccf6e61233b28167a2ff9781472f 310 Pfam PF00701 Dihydrodipicolinate synthetase family 2 306 2.0E-28 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_00895 cc83ccf6e61233b28167a2ff9781472f 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 1.3E-5 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_00895 cc83ccf6e61233b28167a2ff9781472f 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 1.3E-5 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_00895 cc83ccf6e61233b28167a2ff9781472f 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 1.3E-5 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_02515 593f7358b6776f86bd874c7da4e15d0c 322 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 1.5E-140 T 11-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 AVL55_02515 593f7358b6776f86bd874c7da4e15d0c 322 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 5 87 9.8E-24 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AVL55_02515 593f7358b6776f86bd874c7da4e15d0c 322 Pfam PF00589 Phage integrase family 105 307 9.2E-41 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_02515 593f7358b6776f86bd874c7da4e15d0c 322 SUPERFAMILY SSF56349 101 316 1.06E-43 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_02515 593f7358b6776f86bd874c7da4e15d0c 322 Gene3D G3DSA:1.10.443.10 95 310 3.1E-67 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_02515 593f7358b6776f86bd874c7da4e15d0c 322 Gene3D G3DSA:1.10.150.130 1 94 1.0E-26 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 Pfam PF00483 Nucleotidyl transferase 18 281 1.2E-64 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 Gene3D G3DSA:3.90.550.10 6 291 9.7E-87 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 17 388 7.8E-152 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 108 116 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 SUPERFAMILY SSF53448 14 384 4.46E-76 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 415 49.234 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 SUPERFAMILY SSF51161 302 412 7.76E-17 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_08375 131d59a07e6210a8d44e810cfb2e4803 428 Gene3D G3DSA:2.160.10.10 292 418 5.8E-37 T 11-10-2018 AVL55_20065 0044733f748c6b57fb3710924ea77377 145 SUPERFAMILY SSF52218 5 141 4.4E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_20065 0044733f748c6b57fb3710924ea77377 145 Gene3D G3DSA:3.40.50.360 3 144 6.4E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_20065 0044733f748c6b57fb3710924ea77377 145 Pfam PF00258 Flavodoxin 7 137 3.6E-22 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AVL55_00330 2e5e168ac8dadbf221a3ab675d7dabba 287 Gene3D G3DSA:1.20.1540.10 96 281 4.3E-47 T 11-10-2018 IPR035952 Rhomboid-like superfamily AVL55_00330 2e5e168ac8dadbf221a3ab675d7dabba 287 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 5 77 4.1E-16 T 11-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AVL55_00330 2e5e168ac8dadbf221a3ab675d7dabba 287 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 5 278 2.1E-83 T 11-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AVL55_00330 2e5e168ac8dadbf221a3ab675d7dabba 287 SUPERFAMILY SSF144091 98 279 4.45E-36 T 11-10-2018 AVL55_00330 2e5e168ac8dadbf221a3ab675d7dabba 287 Pfam PF01694 Rhomboid family 137 280 7.4E-24 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AVL55_07960 a98b84f6c83f94129d8d35f609806423 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 8.9E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_07960 a98b84f6c83f94129d8d35f609806423 214 Gene3D G3DSA:1.10.357.10 66 205 1.5E-43 T 11-10-2018 AVL55_07960 a98b84f6c83f94129d8d35f609806423 214 SUPERFAMILY SSF48498 83 206 1.48E-34 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AVL55_07960 a98b84f6c83f94129d8d35f609806423 214 Pfam PF08362 YcdC-like protein, C-terminal region 66 206 1.7E-47 T 11-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AVL55_07960 a98b84f6c83f94129d8d35f609806423 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 4.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_07960 a98b84f6c83f94129d8d35f609806423 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 4.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_07960 a98b84f6c83f94129d8d35f609806423 214 Gene3D G3DSA:1.10.10.60 14 65 1.0E-19 T 11-10-2018 AVL55_07960 a98b84f6c83f94129d8d35f609806423 214 SUPERFAMILY SSF46689 13 86 4.34E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_07825 a2821504d70e6781e4f0fb2c6b042de6 142 SUPERFAMILY SSF46785 3 140 6.04E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_07825 a2821504d70e6781e4f0fb2c6b042de6 142 SMART SM00347 24 130 5.8E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_07825 a2821504d70e6781e4f0fb2c6b042de6 142 Gene3D G3DSA:1.10.10.10 1 141 5.4E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_07825 a2821504d70e6781e4f0fb2c6b042de6 142 Pfam PF12802 MarR family 30 94 6.4E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_13750 3487faaa414a3df71274851d823873b0 481 SUPERFAMILY SSF52540 4 186 6.72E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13750 3487faaa414a3df71274851d823873b0 481 Hamap MF_00195 GTPase Der [der]. 2 452 39.168 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AVL55_13750 3487faaa414a3df71274851d823873b0 481 Gene3D G3DSA:3.30.300.20 369 451 1.4E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AVL55_13750 3487faaa414a3df71274851d823873b0 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 193 359 3.6E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_13750 3487faaa414a3df71274851d823873b0 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 154 2.5E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_13750 3487faaa414a3df71274851d823873b0 481 SMART SM00382 1 170 1.1 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13750 3487faaa414a3df71274851d823873b0 481 SMART SM00382 192 339 0.4 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13750 3487faaa414a3df71274851d823873b0 481 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 449 3.2E-180 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AVL55_13750 3487faaa414a3df71274851d823873b0 481 Gene3D G3DSA:3.40.50.300 189 365 5.9E-49 T 11-10-2018 AVL55_13750 3487faaa414a3df71274851d823873b0 481 Gene3D G3DSA:3.40.50.300 2 159 7.2E-43 T 11-10-2018 AVL55_13750 3487faaa414a3df71274851d823873b0 481 SUPERFAMILY SSF52540 137 455 1.39E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13750 3487faaa414a3df71274851d823873b0 481 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 369 449 2.2E-26 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AVL55_13750 3487faaa414a3df71274851d823873b0 481 PIRSF PIRSF006485 1 457 1.6E-180 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AVL55_13750 3487faaa414a3df71274851d823873b0 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.2E-11 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_13750 3487faaa414a3df71274851d823873b0 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.2E-11 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_13750 3487faaa414a3df71274851d823873b0 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 2.2E-11 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_13750 3487faaa414a3df71274851d823873b0 481 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.6E-28 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_13750 3487faaa414a3df71274851d823873b0 481 Pfam PF01926 50S ribosome-binding GTPase 196 313 2.4E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_09450 d93cc3473592688a0274dd94acb7acc9 149 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 19 118 1.9E-14 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AVL55_09450 d93cc3473592688a0274dd94acb7acc9 149 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 22 146 4.3E-43 T 11-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 AVL55_09450 d93cc3473592688a0274dd94acb7acc9 149 SUPERFAMILY SSF53927 20 147 6.86E-42 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AVL55_09450 d93cc3473592688a0274dd94acb7acc9 149 Gene3D G3DSA:3.40.140.10 11 149 7.6E-49 T 11-10-2018 AVL55_09450 d93cc3473592688a0274dd94acb7acc9 149 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 110 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AVL55_13920 cf2c7d14c0a88abf54ab6ab7ac47768e 388 SUPERFAMILY SSF56059 1 386 3.88E-88 T 11-10-2018 AVL55_13920 cf2c7d14c0a88abf54ab6ab7ac47768e 388 Gene3D G3DSA:3.30.1490.330 264 345 1.0E-21 T 11-10-2018 AVL55_13920 cf2c7d14c0a88abf54ab6ab7ac47768e 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 387 2.8E-154 T 11-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AVL55_13920 cf2c7d14c0a88abf54ab6ab7ac47768e 388 SUPERFAMILY SSF52440 174 280 4.89E-38 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AVL55_04360 1b4d1c3877a76a0d50a3588d0266b197 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 370 6.4E-128 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 AVL55_04360 1b4d1c3877a76a0d50a3588d0266b197 379 Gene3D G3DSA:3.80.30.20 1 293 2.1E-97 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AVL55_04360 1b4d1c3877a76a0d50a3588d0266b197 379 Pfam PF04055 Radical SAM superfamily 10 174 3.0E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_04360 1b4d1c3877a76a0d50a3588d0266b197 379 SMART SM00729 5 221 2.8E-48 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AVL55_04360 1b4d1c3877a76a0d50a3588d0266b197 379 SUPERFAMILY SSF102114 2 378 9.94E-111 T 11-10-2018 AVL55_04360 1b4d1c3877a76a0d50a3588d0266b197 379 Pfam PF06969 HemN C-terminal domain 304 368 1.0E-13 T 11-10-2018 IPR010723 HemN, C-terminal AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 Gene3D G3DSA:3.30.70.330 387 459 7.9E-21 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 Pfam PF00271 Helicase conserved C-terminal domain 231 337 3.2E-25 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 Gene3D G3DSA:3.40.50.300 211 368 6.4E-42 T 11-10-2018 AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 Pfam PF00270 DEAD/DEAH box helicase 29 194 1.5E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 SMART SM00490 256 337 3.5E-26 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 Pfam PF03880 DbpA RNA binding domain 389 457 3.8E-22 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 Gene3D G3DSA:3.40.50.300 1 210 8.5E-75 T 11-10-2018 AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 SMART SM00487 23 220 1.0E-61 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 SUPERFAMILY SSF52540 144 362 1.08E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 SUPERFAMILY SSF52540 4 208 3.32E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18315 78df75f08946d1f8bc02936d531cdcd8 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 Gene3D G3DSA:1.20.58.1490 1 93 2.5E-32 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 PRINTS PR00605 Class IC cytochrome C signature 289 311 1.6E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 PRINTS PR00605 Class IC cytochrome C signature 245 256 1.6E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 Gene3D G3DSA:1.10.760.10 205 291 1.9E-74 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 SUPERFAMILY SSF46626 233 316 6.4E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 PIRSF PIRSF000006 1 317 9.1E-103 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 82 5.2E-23 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 SUPERFAMILY SSF46626 55 233 3.87E-31 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 Gene3D G3DSA:1.10.760.10 126 314 1.9E-74 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 316 1.1E-63 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 237 311 1.4E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_10750 f6e019d0c2ba24ac079874bae0818877 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 149 224 9.8E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19840 57e0437add3255021c707fe1bb014a30 417 Gene3D G3DSA:3.90.120.10 289 378 1.0E-96 T 11-10-2018 AVL55_19840 57e0437add3255021c707fe1bb014a30 417 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 98 412 2.7E-96 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AVL55_19840 57e0437add3255021c707fe1bb014a30 417 SUPERFAMILY SSF53335 96 414 8.31E-86 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_19840 57e0437add3255021c707fe1bb014a30 417 Gene3D G3DSA:3.40.50.150 97 406 1.0E-96 T 11-10-2018 AVL55_19840 57e0437add3255021c707fe1bb014a30 417 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 394 412 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AVL55_19840 57e0437add3255021c707fe1bb014a30 417 Pfam PF00145 C-5 cytosine-specific DNA methylase 96 412 1.3E-93 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AVL55_19840 57e0437add3255021c707fe1bb014a30 417 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 157 169 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 AVL55_19840 57e0437add3255021c707fe1bb014a30 417 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 261 274 7.1E-18 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AVL55_19840 57e0437add3255021c707fe1bb014a30 417 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 196 210 7.1E-18 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AVL55_19840 57e0437add3255021c707fe1bb014a30 417 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 97 113 7.1E-18 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AVL55_18935 b2c79dbef9744fcb621a1799a2af55ec 713 Gene3D G3DSA:3.40.50.150 153 455 3.1E-78 T 11-10-2018 AVL55_18935 b2c79dbef9744fcb621a1799a2af55ec 713 Pfam PF02384 N-6 DNA Methylase 153 428 3.4E-71 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AVL55_18935 b2c79dbef9744fcb621a1799a2af55ec 713 SUPERFAMILY SSF53335 10 712 4.57E-103 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_18935 b2c79dbef9744fcb621a1799a2af55ec 713 Gene3D G3DSA:1.20.1260.30 2 145 1.4E-9 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AVL55_18935 b2c79dbef9744fcb621a1799a2af55ec 713 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 176 192 4.1E-16 T 11-10-2018 AVL55_18935 b2c79dbef9744fcb621a1799a2af55ec 713 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 317 341 4.1E-16 T 11-10-2018 AVL55_18935 b2c79dbef9744fcb621a1799a2af55ec 713 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 276 288 4.1E-16 T 11-10-2018 AVL55_18935 b2c79dbef9744fcb621a1799a2af55ec 713 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 199 213 4.1E-16 T 11-10-2018 AVL55_18935 b2c79dbef9744fcb621a1799a2af55ec 713 Pfam PF12161 HsdM N-terminal domain 10 139 2.1E-10 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Pfam PF00679 Elongation factor G C-terminus 607 693 9.9E-29 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 112.934 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Gene3D G3DSA:3.30.70.240 611 682 7.2E-93 T 11-10-2018 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.2E-65 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.0E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.0E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.0E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.0E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 SUPERFAMILY SSF52540 6 288 3.17E-107 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18220 32248079a4c6b7a930d435a400609d68 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.9E-35 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Gene3D G3DSA:3.30.70.870 440 490 3.2E-26 T 11-10-2018 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 SUPERFAMILY SSF54980 409 487 2.84E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Gene3D G3DSA:3.30.230.10 491 695 7.2E-93 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Pfam PF14492 Elongation Factor G, domain II 411 484 5.7E-35 T 11-10-2018 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 SUPERFAMILY SSF54211 486 606 3.03E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Gene3D G3DSA:2.40.30.10 300 423 5.5E-51 T 11-10-2018 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 SUPERFAMILY SSF50447 271 411 1.13E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_18220 32248079a4c6b7a930d435a400609d68 700 SMART SM00838 607 695 2.4E-55 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Gene3D G3DSA:3.40.50.300 2 299 3.9E-116 T 11-10-2018 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 SMART SM00889 487 605 2.5E-79 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AVL55_18220 32248079a4c6b7a930d435a400609d68 700 SUPERFAMILY SSF54980 610 698 1.29E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Pfam PF03764 Elongation factor G, domain IV 486 605 2.3E-50 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AVL55_18220 32248079a4c6b7a930d435a400609d68 700 Pfam PF03144 Elongation factor Tu domain 2 331 398 6.4E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AVL55_03555 7656850d84a1cc83d3c7ea1ff8d94880 241 Pfam PF00005 ABC transporter 20 166 2.7E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_03555 7656850d84a1cc83d3c7ea1ff8d94880 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_03555 7656850d84a1cc83d3c7ea1ff8d94880 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 4.6E-124 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AVL55_03555 7656850d84a1cc83d3c7ea1ff8d94880 241 Gene3D G3DSA:3.40.50.300 2 241 3.0E-71 T 11-10-2018 AVL55_03555 7656850d84a1cc83d3c7ea1ff8d94880 241 SUPERFAMILY SSF52540 4 237 4.55E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_03555 7656850d84a1cc83d3c7ea1ff8d94880 241 SMART SM00382 28 231 3.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_03555 7656850d84a1cc83d3c7ea1ff8d94880 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 7.9E-7 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AVL55_11375 5ceb54f9981b576cceba5e3447d1ed41 239 SUPERFAMILY SSF53448 8 235 4.41E-14 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_11375 5ceb54f9981b576cceba5e3447d1ed41 239 Gene3D G3DSA:3.90.550.10 5 238 3.7E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_11375 5ceb54f9981b576cceba5e3447d1ed41 239 Pfam PF12804 MobA-like NTP transferase domain 11 209 5.0E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase AVL55_16815 9a04d27675e52916ec43500944812cd5 161 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 2.5E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_16815 9a04d27675e52916ec43500944812cd5 161 SMART SM00175 5 159 6.5E-11 T 11-10-2018 AVL55_16815 9a04d27675e52916ec43500944812cd5 161 SMART SM00173 1 160 8.1E-8 T 11-10-2018 AVL55_16815 9a04d27675e52916ec43500944812cd5 161 Gene3D G3DSA:3.40.50.300 2 160 1.0E-42 T 11-10-2018 AVL55_16815 9a04d27675e52916ec43500944812cd5 161 SUPERFAMILY SSF52540 4 159 4.62E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16815 9a04d27675e52916ec43500944812cd5 161 PRINTS PR00449 Transforming protein P21 ras signature 45 67 6.9E-23 T 11-10-2018 AVL55_16815 9a04d27675e52916ec43500944812cd5 161 PRINTS PR00449 Transforming protein P21 ras signature 27 43 6.9E-23 T 11-10-2018 AVL55_16815 9a04d27675e52916ec43500944812cd5 161 PRINTS PR00449 Transforming protein P21 ras signature 106 119 6.9E-23 T 11-10-2018 AVL55_16815 9a04d27675e52916ec43500944812cd5 161 PRINTS PR00449 Transforming protein P21 ras signature 140 161 6.9E-23 T 11-10-2018 AVL55_16815 9a04d27675e52916ec43500944812cd5 161 PRINTS PR00449 Transforming protein P21 ras signature 4 25 6.9E-23 T 11-10-2018 AVL55_16815 9a04d27675e52916ec43500944812cd5 161 Pfam PF00071 Ras family 5 159 1.4E-29 T 11-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 AVL55_17635 30476e9a4d1659d0bd6291228f1051c5 231 Gene3D G3DSA:3.40.50.80 101 231 1.2E-28 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_17635 30476e9a4d1659d0bd6291228f1051c5 231 SUPERFAMILY SSF63380 4 97 2.69E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_17635 30476e9a4d1659d0bd6291228f1051c5 231 Gene3D G3DSA:2.40.30.10 2 98 1.2E-20 T 11-10-2018 AVL55_17635 30476e9a4d1659d0bd6291228f1051c5 231 Pfam PF00175 Oxidoreductase NAD-binding domain 107 210 1.2E-21 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AVL55_17635 30476e9a4d1659d0bd6291228f1051c5 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 2.7E-10 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_17635 30476e9a4d1659d0bd6291228f1051c5 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 2.7E-10 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_17635 30476e9a4d1659d0bd6291228f1051c5 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 131 140 2.7E-10 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_17635 30476e9a4d1659d0bd6291228f1051c5 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 106 125 2.7E-10 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_17635 30476e9a4d1659d0bd6291228f1051c5 231 SUPERFAMILY SSF52343 102 229 8.12E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_10135 becd11f06a913c3844de16ac282a7627 77 Gene3D G3DSA:3.40.30.10 1 77 7.7E-17 T 11-10-2018 AVL55_10135 becd11f06a913c3844de16ac282a7627 77 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 77 1.1E-12 T 11-10-2018 IPR008554 Glutaredoxin-like AVL55_10135 becd11f06a913c3844de16ac282a7627 77 SUPERFAMILY SSF52833 1 77 1.17E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_01760 b575eee6ec255dd446d94b2701854f51 450 Pfam PF05787 Bacterial protein of unknown function (DUF839) 36 137 1.1E-11 T 11-10-2018 IPR008557 Protein of unknown function DUF839 AVL55_01760 b575eee6ec255dd446d94b2701854f51 450 Pfam PF05787 Bacterial protein of unknown function (DUF839) 145 437 7.6E-57 T 11-10-2018 IPR008557 Protein of unknown function DUF839 AVL55_01760 b575eee6ec255dd446d94b2701854f51 450 SUPERFAMILY SSF63829 181 432 1.34E-12 T 11-10-2018 AVL55_19780 c320b74f67fdc4a8516591e25b4d06af 86 SUPERFAMILY SSF64307 6 83 1.06E-23 T 11-10-2018 IPR036868 TusA-like domain superfamily AVL55_19780 c320b74f67fdc4a8516591e25b4d06af 86 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 7 85 26.867 T 11-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AVL55_19780 c320b74f67fdc4a8516591e25b4d06af 86 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 16 40 - T 11-10-2018 IPR001455 TusA-like domain AVL55_19780 c320b74f67fdc4a8516591e25b4d06af 86 Pfam PF01206 Sulfurtransferase TusA 15 83 2.5E-22 T 11-10-2018 IPR001455 TusA-like domain AVL55_19780 c320b74f67fdc4a8516591e25b4d06af 86 Gene3D G3DSA:3.30.110.40 5 85 9.6E-28 T 11-10-2018 IPR036868 TusA-like domain superfamily AVL55_07320 1f7cbf0c1dbed93992e93b24d9052e34 190 Pfam PF12464 Maltose acetyltransferase 6 57 3.3E-15 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AVL55_07320 1f7cbf0c1dbed93992e93b24d9052e34 190 SMART SM01266 4 58 9.6E-20 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AVL55_07320 1f7cbf0c1dbed93992e93b24d9052e34 190 SUPERFAMILY SSF51161 2 185 3.6E-52 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_07320 1f7cbf0c1dbed93992e93b24d9052e34 190 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 6.5E-12 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_07320 1f7cbf0c1dbed93992e93b24d9052e34 190 Gene3D G3DSA:2.160.10.10 1 185 9.9E-69 T 11-10-2018 AVL55_03990 289a91aea74d6018d715d76bb9fd80ba 520 Gene3D G3DSA:1.10.3210.10 318 517 2.4E-62 T 11-10-2018 AVL55_03990 289a91aea74d6018d715d76bb9fd80ba 520 SUPERFAMILY SSF109604 321 509 4.24E-48 T 11-10-2018 AVL55_03990 289a91aea74d6018d715d76bb9fd80ba 520 Gene3D G3DSA:3.30.420.40 20 311 6.0E-89 T 11-10-2018 AVL55_03990 289a91aea74d6018d715d76bb9fd80ba 520 SUPERFAMILY SSF53067 19 138 2.42E-36 T 11-10-2018 AVL55_03990 289a91aea74d6018d715d76bb9fd80ba 520 Gene3D G3DSA:3.30.420.150 123 303 6.0E-89 T 11-10-2018 AVL55_03990 289a91aea74d6018d715d76bb9fd80ba 520 PIRSF PIRSF001267 10 511 8.7E-184 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AVL55_03990 289a91aea74d6018d715d76bb9fd80ba 520 SUPERFAMILY SSF53067 143 319 3.2E-46 T 11-10-2018 AVL55_03990 289a91aea74d6018d715d76bb9fd80ba 520 Pfam PF02541 Ppx/GppA phosphatase family 32 315 1.9E-80 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AVL55_03990 289a91aea74d6018d715d76bb9fd80ba 520 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 19 314 2.6E-99 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AVL55_02980 6398124d14fdd1b6112ab121453ae39a 505 Gene3D G3DSA:3.90.780.10 305 503 6.6E-50 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AVL55_02980 6398124d14fdd1b6112ab121453ae39a 505 Gene3D G3DSA:3.60.21.10 34 303 6.7E-25 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AVL55_02980 6398124d14fdd1b6112ab121453ae39a 505 Pfam PF02872 5'-nucleotidase, C-terminal domain 310 461 2.1E-40 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AVL55_02980 6398124d14fdd1b6112ab121453ae39a 505 PRINTS PR01607 Apyrase family signature 362 385 2.1E-8 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AVL55_02980 6398124d14fdd1b6112ab121453ae39a 505 PRINTS PR01607 Apyrase family signature 435 454 2.1E-8 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AVL55_02980 6398124d14fdd1b6112ab121453ae39a 505 SUPERFAMILY SSF55816 302 499 2.88E-49 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AVL55_02980 6398124d14fdd1b6112ab121453ae39a 505 SUPERFAMILY SSF56300 35 213 1.26E-24 T 11-10-2018 AVL55_13530 9251ab8a6d052c37f953f162b8725f64 1356 Pfam PF05567 Neisseria PilC beta-propeller domain 869 1089 1.5E-21 T 11-10-2018 IPR008707 PilC beta-propeller domain AVL55_13530 9251ab8a6d052c37f953f162b8725f64 1356 SUPERFAMILY SSF53300 42 105 7.79E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_13530 9251ab8a6d052c37f953f162b8725f64 1356 SUPERFAMILY SSF53300 460 684 3.87E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_13530 9251ab8a6d052c37f953f162b8725f64 1356 Gene3D G3DSA:3.40.50.410 41 178 3.2E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_13530 9251ab8a6d052c37f953f162b8725f64 1356 SUPERFAMILY SSF50998 849 1173 1.7E-12 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AVL55_13530 9251ab8a6d052c37f953f162b8725f64 1356 Gene3D G3DSA:2.130.10.10 825 1158 5.0E-10 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_05185 b4582b7504b7f73cdf1fb13719a19cb4 374 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 345 9.1E-115 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AVL55_05185 b4582b7504b7f73cdf1fb13719a19cb4 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 270 285 1.6E-35 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AVL55_05185 b4582b7504b7f73cdf1fb13719a19cb4 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 300 321 1.6E-35 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AVL55_05185 b4582b7504b7f73cdf1fb13719a19cb4 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 1.6E-35 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AVL55_05185 b4582b7504b7f73cdf1fb13719a19cb4 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 1.6E-35 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AVL55_05185 b4582b7504b7f73cdf1fb13719a19cb4 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 1.6E-35 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AVL55_05185 b4582b7504b7f73cdf1fb13719a19cb4 374 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 351 1.8E-118 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AVL55_05185 b4582b7504b7f73cdf1fb13719a19cb4 374 Gene3D G3DSA:3.40.1690.10 215 356 6.3E-54 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AVL55_05185 b4582b7504b7f73cdf1fb13719a19cb4 374 SUPERFAMILY SSF160544 249 352 1.96E-37 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AVL55_09795 e3d6cecc93052a94942ea8ddb3340258 608 Gene3D G3DSA:2.30.42.10 507 608 1.2E-15 T 11-10-2018 AVL55_09795 e3d6cecc93052a94942ea8ddb3340258 608 Gene3D G3DSA:2.60.40.3650 4 192 4.3E-50 T 11-10-2018 AVL55_09795 e3d6cecc93052a94942ea8ddb3340258 608 SUPERFAMILY SSF50156 512 583 1.33E-9 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AVL55_09795 e3d6cecc93052a94942ea8ddb3340258 608 Pfam PF13180 PDZ domain 508 584 1.9E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_09795 e3d6cecc93052a94942ea8ddb3340258 608 Pfam PF05299 M61 glycyl aminopeptidase 289 405 9.1E-44 T 11-10-2018 IPR007963 Peptidase M61, catalytic domain AVL55_09795 e3d6cecc93052a94942ea8ddb3340258 608 SUPERFAMILY SSF55486 200 437 4.32E-11 T 11-10-2018 AVL55_09795 e3d6cecc93052a94942ea8ddb3340258 608 SMART SM00228 507 575 1.8E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_09795 e3d6cecc93052a94942ea8ddb3340258 608 PIRSF PIRSF016493 1 608 7.3E-176 T 11-10-2018 IPR024191 Peptidase M61 AVL55_09795 e3d6cecc93052a94942ea8ddb3340258 608 Gene3D G3DSA:1.10.390.60 195 470 8.0E-97 T 11-10-2018 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 Pfam PF00809 Pterin binding enzyme 12 250 4.0E-61 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 SUPERFAMILY SSF56507 553 872 1.83E-127 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 Gene3D G3DSA:3.20.20.20 2 295 2.0E-134 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 Gene3D G3DSA:1.10.1240.10 299 387 4.8E-41 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 Pfam PF02310 B12 binding domain 399 493 2.4E-20 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 587 858 1.8E-125 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 SMART SM01018 307 390 9.8E-46 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 SUPERFAMILY SSF47644 302 389 8.11E-30 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 Pfam PF02607 B12 binding domain 310 382 3.7E-26 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 Gene3D G3DSA:3.40.50.280 394 546 3.2E-57 T 11-10-2018 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 SUPERFAMILY SSF51717 8 282 2.88E-94 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 Gene3D G3DSA:1.10.288.10 586 742 3.7E-143 T 11-10-2018 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 TIGRFAM TIGR02082 metH: methionine synthase 5 842 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 SUPERFAMILY SSF52242 393 545 3.4E-48 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 Gene3D G3DSA:3.10.196.10 559 872 3.7E-143 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_05260 922d39cb24e6b12bada6e69ecac369c9 874 PIRSF PIRSF000381 2 845 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 SUPERFAMILY SSF48557 3 449 3.77E-135 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 452 2.2E-189 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 39.841 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.2E-26 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.2E-26 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.2E-26 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.2E-26 T 11-10-2018 IPR000362 Fumarate lyase family AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 Pfam PF00206 Lyase 6 301 4.2E-82 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 Gene3D G3DSA:1.10.275.10 1 107 2.4E-33 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 5.8E-22 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.5E-67 T 11-10-2018 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.5E-67 T 11-10-2018 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.5E-67 T 11-10-2018 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.5E-67 T 11-10-2018 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.5E-67 T 11-10-2018 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.5E-67 T 11-10-2018 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 Gene3D G3DSA:1.20.200.10 108 445 3.8E-141 T 11-10-2018 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 Gene3D G3DSA:1.10.40.30 363 433 3.8E-141 T 11-10-2018 AVL55_01990 c653634624cf35285e40ccfa6a3cd12f 460 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AVL55_15865 33db3380d5d9e56cc33be362cc748de8 400 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 3 398 1.0E-136 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AVL55_15865 33db3380d5d9e56cc33be362cc748de8 400 SUPERFAMILY SSF53067 3 350 1.17E-21 T 11-10-2018 AVL55_15865 33db3380d5d9e56cc33be362cc748de8 400 Gene3D G3DSA:3.30.420.40 9 394 2.6E-127 T 11-10-2018 AVL55_15865 33db3380d5d9e56cc33be362cc748de8 400 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 399 39.575 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AVL55_15865 33db3380d5d9e56cc33be362cc748de8 400 Gene3D G3DSA:3.30.420.40 154 359 2.6E-127 T 11-10-2018 AVL55_03035 7dd092af1d1db030a8512f1d5660429c 476 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 475 2.9E-164 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AVL55_03035 7dd092af1d1db030a8512f1d5660429c 476 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 475 1.2E-28 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AVL55_03035 7dd092af1d1db030a8512f1d5660429c 476 Pfam PF12801 4Fe-4S binding domain 96 138 3.0E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AVL55_03035 7dd092af1d1db030a8512f1d5660429c 476 SUPERFAMILY SSF54862 106 361 1.4E-28 T 11-10-2018 AVL55_03035 7dd092af1d1db030a8512f1d5660429c 476 Pfam PF13746 4Fe-4S dicluster domain 220 329 4.5E-46 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AVL55_03035 7dd092af1d1db030a8512f1d5660429c 476 Gene3D G3DSA:2.60.40.10 359 475 1.1E-34 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_03035 7dd092af1d1db030a8512f1d5660429c 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 276 287 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AVL55_04015 ce64153f1be399eb571e8aaed2410e5d 268 SMART SM00382 46 240 5.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_04015 ce64153f1be399eb571e8aaed2410e5d 268 Pfam PF00005 ABC transporter 37 193 5.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_04015 ce64153f1be399eb571e8aaed2410e5d 268 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_04015 ce64153f1be399eb571e8aaed2410e5d 268 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 22 268 2.8E-117 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AVL55_04015 ce64153f1be399eb571e8aaed2410e5d 268 Gene3D G3DSA:3.40.50.300 17 265 7.4E-68 T 11-10-2018 AVL55_04015 ce64153f1be399eb571e8aaed2410e5d 268 SUPERFAMILY SSF52540 19 255 1.3E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15325 ed5f948abe1ec4d66e5019fdcd50d955 246 Pfam PF00462 Glutaredoxin 177 235 1.0E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AVL55_15325 ed5f948abe1ec4d66e5019fdcd50d955 246 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 168 246 1.5E-36 T 11-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 AVL55_15325 ed5f948abe1ec4d66e5019fdcd50d955 246 PRINTS PR00160 Glutaredoxin signature 177 195 9.4E-15 T 11-10-2018 IPR014025 Glutaredoxin subgroup AVL55_15325 ed5f948abe1ec4d66e5019fdcd50d955 246 PRINTS PR00160 Glutaredoxin signature 218 231 9.4E-15 T 11-10-2018 IPR014025 Glutaredoxin subgroup AVL55_15325 ed5f948abe1ec4d66e5019fdcd50d955 246 PRINTS PR00160 Glutaredoxin signature 232 245 9.4E-15 T 11-10-2018 IPR014025 Glutaredoxin subgroup AVL55_15325 ed5f948abe1ec4d66e5019fdcd50d955 246 Pfam PF08534 Redoxin 9 164 1.2E-32 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AVL55_15325 ed5f948abe1ec4d66e5019fdcd50d955 246 SUPERFAMILY SSF52833 8 244 3.72E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_15325 ed5f948abe1ec4d66e5019fdcd50d955 246 Gene3D G3DSA:3.40.30.10 8 169 4.0E-61 T 11-10-2018 AVL55_15325 ed5f948abe1ec4d66e5019fdcd50d955 246 Gene3D G3DSA:3.40.30.10 176 246 3.3E-24 T 11-10-2018 AVL55_11705 4d9c686749a94921b2ee9a8e56ba740e 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 151 3.3E-60 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_11705 4d9c686749a94921b2ee9a8e56ba740e 159 SUPERFAMILY SSF55040 11 155 4.84E-58 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_11705 4d9c686749a94921b2ee9a8e56ba740e 159 Gene3D G3DSA:3.30.70.640 1 159 8.8E-66 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_11705 4d9c686749a94921b2ee9a8e56ba740e 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 33.538 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_11705 4d9c686749a94921b2ee9a8e56ba740e 159 Pfam PF01967 MoaC family 15 150 1.3E-52 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_04860 cf77888d26bc3df059db08c71e85cf58 228 Gene3D G3DSA:2.30.30.910 88 221 9.5E-35 T 11-10-2018 AVL55_04860 cf77888d26bc3df059db08c71e85cf58 228 Gene3D G3DSA:2.60.40.4070 104 191 9.5E-35 T 11-10-2018 AVL55_04860 cf77888d26bc3df059db08c71e85cf58 228 Pfam PF13860 FlgD Ig-like domain 117 180 2.9E-17 T 11-10-2018 IPR025965 FlgD Ig-like domain AVL55_04860 cf77888d26bc3df059db08c71e85cf58 228 Pfam PF03963 Flagellar hook capping protein - N-terminal region 17 79 2.5E-20 T 11-10-2018 IPR005648 Flagellar hook capping protein AVL55_04860 cf77888d26bc3df059db08c71e85cf58 228 Pfam PF13861 FlgD Tudor-like domain 87 223 2.9E-15 T 11-10-2018 IPR025963 FlgD Tudor-like domain AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 5.1E-243 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 SUPERFAMILY SSF55186 63 241 1.7E-65 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Pfam PF03129 Anticodon binding domain 541 630 5.2E-23 T 11-10-2018 IPR004154 Anticodon-binding AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Gene3D G3DSA:3.30.54.20 130 187 6.5E-64 T 11-10-2018 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 SMART SM00863 170 219 2.4E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 SUPERFAMILY SSF55681 243 525 1.77E-98 T 11-10-2018 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 8.0E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Gene3D G3DSA:3.40.50.800 532 638 2.5E-31 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 SUPERFAMILY SSF52954 530 632 1.96E-31 T 11-10-2018 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.9E-55 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.9E-55 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.9E-55 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.9E-55 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.9E-55 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 SUPERFAMILY SSF81271 3 61 3.27E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.376 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Gene3D G3DSA:3.30.980.10 69 222 6.5E-64 T 11-10-2018 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 528 1.1E-48 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Gene3D G3DSA:3.10.20.30 3 62 7.2E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Pfam PF02824 TGS domain 4 61 6.8E-11 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AVL55_08090 cdf1e551c953792b6a6adbcfc5597f94 638 Gene3D G3DSA:3.30.930.10 223 531 4.5E-130 T 11-10-2018 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 Gene3D G3DSA:3.40.50.2300 1006 1153 4.2E-29 T 11-10-2018 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 SUPERFAMILY SSF46689 1227 1275 1.84E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 SMART SM00387 893 1001 7.4E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1227 1268 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 Pfam PF12833 Helix-turn-helix domain 1197 1273 3.0E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 896 999 3.8E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 Gene3D G3DSA:1.10.10.60 1175 1273 1.9E-16 T 11-10-2018 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 Pfam PF00512 His Kinase A (phospho-acceptor) domain 787 841 1.7E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 Gene3D G3DSA:1.10.287.130 776 843 1.1E-10 T 11-10-2018 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 SMART SM00448 1022 1134 1.0E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 SUPERFAMILY SSF52172 1020 1150 1.12E-29 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 SMART SM00342 1190 1272 1.0E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 PRINTS PR00344 Bacterial sensor protein C-terminal signature 948 958 5.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 PRINTS PR00344 Bacterial sensor protein C-terminal signature 930 944 5.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 998 5.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 979 5.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 SUPERFAMILY SSF69322 47 319 1.31E-5 T 11-10-2018 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 SUPERFAMILY SSF47384 778 841 1.0E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 Gene3D G3DSA:2.130.10.10 41 285 1.2E-11 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 Pfam PF00072 Response regulator receiver domain 1025 1134 4.2E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 Gene3D G3DSA:3.30.565.10 860 1003 2.7E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_01465 a5666f596b65be3607e0e8dda9455044 1280 SUPERFAMILY SSF55874 865 1000 7.86E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 SUPERFAMILY SSF47384 515 593 5.3E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Gene3D G3DSA:3.30.565.10 593 753 2.4E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 SUPERFAMILY SSF55785 4 125 1.41E-20 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 SUPERFAMILY SSF52172 769 883 4.13E-20 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Gene3D G3DSA:3.40.50.2300 754 884 9.0E-21 T 11-10-2018 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Pfam PF01590 GAF domain 155 303 1.8E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 638 749 2.4E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 SMART SM00388 527 592 5.0E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 675 689 9.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 728 9.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 735 748 9.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Gene3D G3DSA:1.10.287.130 517 592 4.8E-17 T 11-10-2018 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 SUPERFAMILY SSF55781 307 504 7.63E-29 T 11-10-2018 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 SMART SM00387 638 751 6.0E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Gene3D G3DSA:3.30.450.20 17 259 5.2E-123 T 11-10-2018 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Pfam PF08446 PAS fold 13 125 2.9E-10 T 11-10-2018 IPR013654 PAS fold-2 GO:0006355 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Pfam PF00072 Response regulator receiver domain 772 882 2.9E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 SMART SM00448 770 883 3.0E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Pfam PF00512 His Kinase A (phospho-acceptor) domain 528 591 7.7E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Gene3D G3DSA:3.30.450.40 13 483 5.2E-123 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Gene3D G3DSA:3.30.450.270 327 500 5.2E-123 T 11-10-2018 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 SUPERFAMILY SSF55874 581 749 2.49E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 SUPERFAMILY SSF55781 144 318 2.64E-47 T 11-10-2018 AVL55_16145 67103411847f4e9b4bd8b257f391fad9 884 Pfam PF00360 Phytochrome region 339 506 7.4E-25 T 11-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 AVL55_10195 9fb4cc9eedcad05a06bd0155b7d068df 307 SUPERFAMILY SSF52540 19 301 1.88E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_10195 9fb4cc9eedcad05a06bd0155b7d068df 307 Pfam PF13614 AAA domain 11 212 2.1E-20 T 11-10-2018 IPR025669 AAA domain AVL55_10195 9fb4cc9eedcad05a06bd0155b7d068df 307 Gene3D G3DSA:3.40.50.300 3 303 6.7E-40 T 11-10-2018 AVL55_05680 fa628a3cc2d0f927f3680a99fb79d7fc 123 Gene3D G3DSA:1.10.1660.10 1 119 2.9E-28 T 11-10-2018 AVL55_05680 fa628a3cc2d0f927f3680a99fb79d7fc 123 Pfam PF13411 MerR HTH family regulatory protein 2 63 1.8E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05680 fa628a3cc2d0f927f3680a99fb79d7fc 123 SUPERFAMILY SSF46955 2 120 1.03E-26 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_05680 fa628a3cc2d0f927f3680a99fb79d7fc 123 SMART SM00422 2 66 1.1E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05680 fa628a3cc2d0f927f3680a99fb79d7fc 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 33 53 4.7E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05680 fa628a3cc2d0f927f3680a99fb79d7fc 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 22 4.7E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05680 fa628a3cc2d0f927f3680a99fb79d7fc 123 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 1 120 8.2E-56 T 11-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 AVL55_14010 2f7204b5a0fb8648f84c7753ad207454 203 Pfam PF02698 DUF218 domain 60 193 5.1E-16 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AVL55_10115 310042ef683ccb46e8ccd7c0375caf84 772 Gene3D G3DSA:1.20.1640.10 204 392 8.2E-7 T 11-10-2018 AVL55_10115 310042ef683ccb46e8ccd7c0375caf84 772 Gene3D G3DSA:1.20.1640.10 586 771 2.6E-13 T 11-10-2018 AVL55_10115 310042ef683ccb46e8ccd7c0375caf84 772 SUPERFAMILY SSF82866 181 377 1.44E-26 T 11-10-2018 AVL55_10115 310042ef683ccb46e8ccd7c0375caf84 772 SUPERFAMILY SSF82866 567 765 8.37E-32 T 11-10-2018 AVL55_10115 310042ef683ccb46e8ccd7c0375caf84 772 Pfam PF03176 MMPL family 143 411 4.8E-11 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AVL55_10115 310042ef683ccb46e8ccd7c0375caf84 772 Pfam PF03176 MMPL family 467 762 1.5E-16 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AVL55_06740 d4fc72fd842c299d570b1ea807740039 110 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 9 110 1.0E-35 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AVL55_06740 d4fc72fd842c299d570b1ea807740039 110 PIRSF PIRSF037511 1 110 1.0E-31 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AVL55_06740 d4fc72fd842c299d570b1ea807740039 110 Pfam PF01253 Translation initiation factor SUI1 34 104 7.1E-17 T 11-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AVL55_06740 d4fc72fd842c299d570b1ea807740039 110 Gene3D G3DSA:3.30.780.10 30 110 9.9E-31 T 11-10-2018 AVL55_06740 d4fc72fd842c299d570b1ea807740039 110 SUPERFAMILY SSF55159 7 106 1.01E-22 T 11-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 Gene3D G3DSA:3.40.50.12740 1 207 5.8E-50 T 11-10-2018 AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 SMART SM00448 1 114 1.5E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 SUPERFAMILY SSF46894 143 207 9.18E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 SMART SM00421 144 201 3.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 8.3E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 Pfam PF00072 Response regulator receiver domain 3 114 6.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 SUPERFAMILY SSF52172 1 127 2.99E-29 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 3.7E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 3.7E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_06175 a03b8f19e563d2fe30c67e008c334e94 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 3.7E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_05580 9f450368d204cd8fab389af6bfa44f8f 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AVL55_05580 9f450368d204cd8fab389af6bfa44f8f 151 Gene3D G3DSA:1.10.10.10 10 149 2.2E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_05580 9f450368d204cd8fab389af6bfa44f8f 151 Pfam PF01047 MarR family 35 93 5.1E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_05580 9f450368d204cd8fab389af6bfa44f8f 151 SUPERFAMILY SSF46785 8 144 1.79E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_05580 9f450368d204cd8fab389af6bfa44f8f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.7E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_05580 9f450368d204cd8fab389af6bfa44f8f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.7E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_05580 9f450368d204cd8fab389af6bfa44f8f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 2.7E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_05580 9f450368d204cd8fab389af6bfa44f8f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.7E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_05580 9f450368d204cd8fab389af6bfa44f8f 151 SMART SM00347 28 129 4.4E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_03690 d8f986c38adf5dbe0e32b2a82eead66a 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AVL55_03690 d8f986c38adf5dbe0e32b2a82eead66a 184 Pfam PF00255 Glutathione peroxidase 32 136 7.6E-27 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_03690 d8f986c38adf5dbe0e32b2a82eead66a 184 Gene3D G3DSA:3.40.30.10 21 184 2.8E-46 T 11-10-2018 AVL55_03690 d8f986c38adf5dbe0e32b2a82eead66a 184 PRINTS PR01011 Glutathione peroxidase family signature 48 65 9.3E-12 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_03690 d8f986c38adf5dbe0e32b2a82eead66a 184 PRINTS PR01011 Glutathione peroxidase family signature 143 152 9.3E-12 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_03690 d8f986c38adf5dbe0e32b2a82eead66a 184 PRINTS PR01011 Glutathione peroxidase family signature 83 99 9.3E-12 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_03690 d8f986c38adf5dbe0e32b2a82eead66a 184 SUPERFAMILY SSF52833 37 182 2.13E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_03690 d8f986c38adf5dbe0e32b2a82eead66a 184 PIRSF PIRSF000303 1 184 2.0E-54 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AVL55_02735 cde53dc22fe74e587bffd16ff814d1d6 356 Gene3D G3DSA:3.40.1550.10 152 349 8.2E-39 T 11-10-2018 IPR028976 CheC-like superfamily AVL55_02735 cde53dc22fe74e587bffd16ff814d1d6 356 SUPERFAMILY SSF103039 153 343 5.84E-42 T 11-10-2018 IPR028976 CheC-like superfamily AVL55_02735 cde53dc22fe74e587bffd16ff814d1d6 356 SMART SM00448 3 115 1.6E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02735 cde53dc22fe74e587bffd16ff814d1d6 356 SUPERFAMILY SSF52172 4 118 3.56E-30 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_02735 cde53dc22fe74e587bffd16ff814d1d6 356 Gene3D G3DSA:3.40.50.2300 2 143 2.0E-29 T 11-10-2018 AVL55_02735 cde53dc22fe74e587bffd16ff814d1d6 356 Pfam PF00072 Response regulator receiver domain 5 114 3.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.3E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.3E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.3E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 1.3E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 1.3E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 460 32.346 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 SUPERFAMILY SSF48163 298 460 7.06E-44 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 Gene3D G3DSA:1.10.10.350 366 468 1.1E-21 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 SUPERFAMILY SSF52374 3 297 8.85E-115 T 11-10-2018 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 Gene3D G3DSA:3.40.50.620 1 313 6.6E-137 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 2.6E-112 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AVL55_07155 5e7c066ee1a2032a967c567bc7f02fcd 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 463 4.9E-189 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 Pfam PF00270 DEAD/DEAH box helicase 23 194 3.1E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 SMART SM00490 253 341 1.1E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 SMART SM00487 17 213 9.4E-21 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 354 3.0E-73 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 SUPERFAMILY SSF53271 572 697 7.74E-18 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 Gene3D G3DSA:3.40.50.2020 566 704 1.3E-11 T 11-10-2018 AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 Pfam PF00156 Phosphoribosyl transferase domain 610 691 1.4E-6 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 Gene3D G3DSA:3.40.50.300 3 206 3.0E-53 T 11-10-2018 AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 143 152 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 Pfam PF00271 Helicase conserved C-terminal domain 242 340 4.6E-11 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_18925 ef4ddf58b06354f3910cb05bd85b0981 704 SUPERFAMILY SSF52540 67 357 2.48E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08465 cd374c11fda8bd3a9226dda1b565dd81 139 SUPERFAMILY SSF54631 1 127 1.07E-30 T 11-10-2018 AVL55_08465 cd374c11fda8bd3a9226dda1b565dd81 139 Pfam PF00571 CBS domain 6 57 8.4E-8 T 11-10-2018 IPR000644 CBS domain AVL55_08465 cd374c11fda8bd3a9226dda1b565dd81 139 Pfam PF00571 CBS domain 73 128 1.0E-9 T 11-10-2018 IPR000644 CBS domain AVL55_08465 cd374c11fda8bd3a9226dda1b565dd81 139 Gene3D G3DSA:3.10.580.10 1 133 2.5E-28 T 11-10-2018 AVL55_08465 cd374c11fda8bd3a9226dda1b565dd81 139 SMART SM00116 13 61 1.7 T 11-10-2018 IPR000644 CBS domain AVL55_08465 cd374c11fda8bd3a9226dda1b565dd81 139 SMART SM00116 80 128 0.03 T 11-10-2018 IPR000644 CBS domain AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 Pfam PF00800 Prephenate dehydratase 106 287 4.5E-55 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 SMART SM00830 10 90 7.3E-27 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 88 5.9E-25 T 11-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 Gene3D G3DSA:3.40.190.10 189 274 5.3E-49 T 11-10-2018 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 SUPERFAMILY SSF48600 5 91 1.07E-22 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 SUPERFAMILY SSF55021 280 377 5.41E-26 T 11-10-2018 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 PIRSF PIRSF001500 1 380 3.7E-127 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 Gene3D G3DSA:3.40.190.10 109 283 5.3E-49 T 11-10-2018 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 Pfam PF01817 Chorismate mutase type II 10 87 1.0E-18 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 SUPERFAMILY SSF53850 105 290 1.3E-50 T 11-10-2018 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 Gene3D G3DSA:1.20.59.10 1 108 5.6E-32 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AVL55_06730 9557a4c57e3813c100d3f4407a0a5e4d 393 Gene3D G3DSA:3.30.70.260 291 379 1.3E-26 T 11-10-2018 AVL55_17500 7f86084f41014dcdbe3aa99cdff43b52 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 1.4E-54 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17500 7f86084f41014dcdbe3aa99cdff43b52 130 SUPERFAMILY SSF53137 18 130 3.6E-47 T 11-10-2018 AVL55_17500 7f86084f41014dcdbe3aa99cdff43b52 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.74 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AVL55_17500 7f86084f41014dcdbe3aa99cdff43b52 130 Pfam PF00411 Ribosomal protein S11 20 129 2.2E-50 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AVL55_17500 7f86084f41014dcdbe3aa99cdff43b52 130 Gene3D G3DSA:3.30.420.80 1 130 4.5E-56 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_17500 7f86084f41014dcdbe3aa99cdff43b52 130 PIRSF PIRSF002131 1 130 7.9E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AVL55_17500 7f86084f41014dcdbe3aa99cdff43b52 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site AVL55_12655 14417aa04aaa755f2e46d7eb68df71af 687 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 272 683 1.4E-98 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AVL55_12655 14417aa04aaa755f2e46d7eb68df71af 687 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 240 3.7E-42 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 AVL55_12655 14417aa04aaa755f2e46d7eb68df71af 687 Pfam PF01266 FAD dependent oxidoreductase 272 653 3.5E-29 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AVL55_12655 14417aa04aaa755f2e46d7eb68df71af 687 Gene3D G3DSA:3.30.9.10 362 591 7.8E-114 T 11-10-2018 AVL55_12655 14417aa04aaa755f2e46d7eb68df71af 687 Gene3D G3DSA:3.50.50.60 272 681 7.8E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12655 14417aa04aaa755f2e46d7eb68df71af 687 Gene3D G3DSA:3.40.50.150 6 252 5.6E-101 T 11-10-2018 AVL55_12655 14417aa04aaa755f2e46d7eb68df71af 687 SUPERFAMILY SSF51905 272 557 1.81E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12655 14417aa04aaa755f2e46d7eb68df71af 687 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 4 679 24.698 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 Gene3D G3DSA:3.30.830.10 616 874 2.3E-90 T 11-10-2018 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 SUPERFAMILY SSF63411 234 467 1.3E-61 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 SUPERFAMILY SSF63411 701 915 1.83E-39 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 Gene3D G3DSA:3.30.830.10 4 231 3.2E-70 T 11-10-2018 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 Gene3D G3DSA:3.30.830.10 468 847 2.3E-90 T 11-10-2018 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 SUPERFAMILY SSF63411 11 226 1.18E-46 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 Pfam PF00675 Insulinase (Peptidase family M16) 22 154 1.4E-30 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 41 64 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 SUPERFAMILY SSF63411 468 690 1.31E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 1.6E-52 T 11-10-2018 IPR032632 Peptidase M16, middle/third domain AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 Gene3D G3DSA:3.30.830.10 237 466 3.4E-59 T 11-10-2018 AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 Pfam PF05193 Peptidase M16 inactive domain 183 350 1.4E-14 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AVL55_06605 4f1f7c2d35b74862f3367dcde7d2678f 915 Pfam PF05193 Peptidase M16 inactive domain 645 803 6.7E-6 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AVL55_01980 6ce8eb879d74bd65a43a5e8a97f9a441 298 PIRSF PIRSF037442 8 296 1.6E-75 T 11-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AVL55_01980 6ce8eb879d74bd65a43a5e8a97f9a441 298 Pfam PF12146 Serine aminopeptidase, S33 39 129 4.2E-12 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AVL55_01980 6ce8eb879d74bd65a43a5e8a97f9a441 298 Gene3D G3DSA:3.40.50.1820 12 297 4.8E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_01980 6ce8eb879d74bd65a43a5e8a97f9a441 298 SUPERFAMILY SSF53474 15 297 1.8E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 SUPERFAMILY SSF53067 101 313 1.55E-42 T 11-10-2018 AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 5.3E-127 T 11-10-2018 IPR017861 Kae1/TsaD family AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 Gene3D G3DSA:3.30.420.40 129 297 3.1E-132 T 11-10-2018 AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.4E-51 T 11-10-2018 IPR017861 Kae1/TsaD family AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 Gene3D G3DSA:3.30.420.40 3 319 3.1E-132 T 11-10-2018 AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 8.7E-137 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 SUPERFAMILY SSF53067 3 123 6.47E-32 T 11-10-2018 AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 65.139 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AVL55_03125 a2450c308d0539ab35e4a8b8489e9fc4 341 Pfam PF00814 Glycoprotease family 24 311 1.3E-104 T 11-10-2018 IPR000905 Gcp-like domain AVL55_07740 fbb024554fc5186c5725f6f1cfee3248 825 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 16 818 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AVL55_07740 fbb024554fc5186c5725f6f1cfee3248 825 Pfam PF00343 Carbohydrate phosphorylase 104 818 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AVL55_07740 fbb024554fc5186c5725f6f1cfee3248 825 PIRSF PIRSF000460 2 825 2.3E-227 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AVL55_07740 fbb024554fc5186c5725f6f1cfee3248 825 Gene3D G3DSA:3.40.50.2000 484 811 0.0 T 11-10-2018 AVL55_07740 fbb024554fc5186c5725f6f1cfee3248 825 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 662 674 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AVL55_07740 fbb024554fc5186c5725f6f1cfee3248 825 SUPERFAMILY SSF53756 14 823 0.0 T 11-10-2018 AVL55_07740 fbb024554fc5186c5725f6f1cfee3248 825 Gene3D G3DSA:3.40.50.2000 25 818 0.0 T 11-10-2018 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 PIRSF PIRSF002162 1 177 1.1E-42 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 Pfam PF00347 Ribosomal protein L6 13 82 2.8E-16 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 Pfam PF00347 Ribosomal protein L6 91 164 1.0E-21 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 6.7E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 6.7E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 6.7E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 Gene3D G3DSA:3.90.930.12 83 177 1.5E-41 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.202 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 Gene3D G3DSA:3.90.930.12 1 82 5.3E-26 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.2E-74 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 SUPERFAMILY SSF56053 83 177 6.94E-39 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17540 7ef358962ffb0608e5026cd0eaa6b902 177 SUPERFAMILY SSF56053 1 82 1.76E-20 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 PRINTS PR00083 Histidinol dehydrogenase signature 319 344 1.3E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 PRINTS PR00083 Histidinol dehydrogenase signature 31 55 1.3E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 PRINTS PR00083 Histidinol dehydrogenase signature 251 270 1.3E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 PRINTS PR00083 Histidinol dehydrogenase signature 360 378 1.3E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 1.3E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 1.3E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 PRINTS PR00083 Histidinol dehydrogenase signature 132 158 1.3E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 1.3E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 Gene3D G3DSA:3.40.50.1980 28 231 5.7E-119 T 11-10-2018 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 Pfam PF00815 Histidinol dehydrogenase 22 426 2.1E-164 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 229 261 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 SUPERFAMILY SSF53720 3 426 7.26E-87 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 PIRSF PIRSF000099 1 429 6.2E-161 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 31 425 3.7E-160 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 Gene3D G3DSA:3.40.50.1980 233 348 5.7E-119 T 11-10-2018 AVL55_13015 04e642573cd31365efe6bbc95775e954 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 426 39.737 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AVL55_09055 9e85ce923d54f68bb67aba2f74cc652d 168 SUPERFAMILY SSF47741 72 158 5.5E-31 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AVL55_09055 9e85ce923d54f68bb67aba2f74cc652d 168 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 54 1.7E-6 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AVL55_09055 9e85ce923d54f68bb67aba2f74cc652d 168 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AVL55_09055 9e85ce923d54f68bb67aba2f74cc652d 168 Pfam PF01799 [2Fe-2S] binding domain 72 144 1.4E-28 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AVL55_09055 9e85ce923d54f68bb67aba2f74cc652d 168 Gene3D G3DSA:1.10.150.120 74 166 1.9E-26 T 11-10-2018 AVL55_09055 9e85ce923d54f68bb67aba2f74cc652d 168 SUPERFAMILY SSF54292 2 77 1.09E-25 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AVL55_09055 9e85ce923d54f68bb67aba2f74cc652d 168 Gene3D G3DSA:3.10.20.30 1 73 5.1E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_03265 85eee1ce67907842f58c641546515833 936 Pfam PF00330 Aconitase family (aconitate hydratase) 411 894 8.4E-61 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_03265 85eee1ce67907842f58c641546515833 936 SUPERFAMILY SSF52016 169 394 3.92E-31 T 11-10-2018 AVL55_03265 85eee1ce67907842f58c641546515833 936 Pfam PF11791 Aconitate B N-terminal domain 6 163 5.2E-43 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_03265 85eee1ce67907842f58c641546515833 936 Gene3D G3DSA:3.30.499.10 732 820 4.3E-8 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AVL55_03265 85eee1ce67907842f58c641546515833 936 Gene3D G3DSA:3.30.499.10 833 921 1.5E-17 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AVL55_03265 85eee1ce67907842f58c641546515833 936 Pfam PF06434 Aconitate hydratase 2 N-terminus 177 406 1.3E-61 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_03265 85eee1ce67907842f58c641546515833 936 SUPERFAMILY SSF53732 402 914 1.16E-72 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AVL55_03265 85eee1ce67907842f58c641546515833 936 Gene3D G3DSA:3.30.499.10 430 567 1.2E-114 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AVL55_03265 85eee1ce67907842f58c641546515833 936 SUPERFAMILY SSF74778 3 167 7.19E-42 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_03265 85eee1ce67907842f58c641546515833 936 Gene3D G3DSA:3.20.19.10 169 385 1.3E-32 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AVL55_03265 85eee1ce67907842f58c641546515833 936 Gene3D G3DSA:3.40.1060.10 425 717 1.2E-114 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AVL55_03265 85eee1ce67907842f58c641546515833 936 Gene3D G3DSA:1.25.40.310 3 168 8.7E-50 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AVL55_08330 4b1ef47cc67466f6a0f7d564a4db2028 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 4.2E-18 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AVL55_08330 4b1ef47cc67466f6a0f7d564a4db2028 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AVL55_08330 4b1ef47cc67466f6a0f7d564a4db2028 269 SUPERFAMILY SSF56219 1 268 1.83E-86 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_08330 4b1ef47cc67466f6a0f7d564a4db2028 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 6.9E-88 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AVL55_08330 4b1ef47cc67466f6a0f7d564a4db2028 269 Gene3D G3DSA:3.60.10.10 1 269 2.7E-78 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_08330 4b1ef47cc67466f6a0f7d564a4db2028 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.1E-99 T 11-10-2018 AVL55_17680 a48581cad7cf70ce4c7ca75e1e6e7deb 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 11-10-2018 IPR019844 Cold-shock conserved site AVL55_17680 a48581cad7cf70ce4c7ca75e1e6e7deb 69 Pfam PF00313 'Cold-shock' DNA-binding domain 4 68 2.0E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_17680 a48581cad7cf70ce4c7ca75e1e6e7deb 69 PIRSF PIRSF002599 1 69 4.4E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AVL55_17680 a48581cad7cf70ce4c7ca75e1e6e7deb 69 PRINTS PR00050 Cold shock protein signature 42 60 6.3E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_17680 a48581cad7cf70ce4c7ca75e1e6e7deb 69 PRINTS PR00050 Cold shock protein signature 27 36 6.3E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_17680 a48581cad7cf70ce4c7ca75e1e6e7deb 69 PRINTS PR00050 Cold shock protein signature 6 21 6.3E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_17680 a48581cad7cf70ce4c7ca75e1e6e7deb 69 SUPERFAMILY SSF50249 3 68 2.03E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_17680 a48581cad7cf70ce4c7ca75e1e6e7deb 69 SMART SM00357 5 69 1.4E-30 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AVL55_17680 a48581cad7cf70ce4c7ca75e1e6e7deb 69 Gene3D G3DSA:2.40.50.140 1 69 3.1E-31 T 11-10-2018 AVL55_18555 c574b317b645fa9c9a83a0eff3767070 276 SUPERFAMILY SSF55811 100 256 4.87E-41 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_18555 c574b317b645fa9c9a83a0eff3767070 276 ProSitePatterns PS00893 Nudix box signature. 180 201 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AVL55_18555 c574b317b645fa9c9a83a0eff3767070 276 Pfam PF00293 NUDIX domain 152 256 3.3E-19 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AVL55_18555 c574b317b645fa9c9a83a0eff3767070 276 SUPERFAMILY SSF55811 12 116 1.42E-10 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_18555 c574b317b645fa9c9a83a0eff3767070 276 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 113 144 1.1E-12 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AVL55_18555 c574b317b645fa9c9a83a0eff3767070 276 Gene3D G3DSA:3.90.79.20 3 145 4.2E-26 T 11-10-2018 AVL55_18555 c574b317b645fa9c9a83a0eff3767070 276 Gene3D G3DSA:3.90.79.10 146 273 7.0E-41 T 11-10-2018 AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 353 3.0E-87 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 Gene3D G3DSA:3.50.50.60 8 349 7.1E-79 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 321 337 6.6E-12 T 11-10-2018 AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 321 6.6E-12 T 11-10-2018 AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 6.6E-12 T 11-10-2018 AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 173 188 6.6E-12 T 11-10-2018 AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 Gene3D G3DSA:3.30.9.50 100 295 7.1E-79 T 11-10-2018 AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 320 333 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 Pfam PF01494 FAD binding domain 7 365 9.8E-20 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AVL55_15020 833a73148d2a394cc070ccb7cad4d10f 448 SUPERFAMILY SSF51905 7 427 2.82E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12495 0d9691858ee97c5e19b062fa91dbcb74 589 Gene3D G3DSA:3.30.479.30 71 190 4.9E-24 T 11-10-2018 AVL55_12495 0d9691858ee97c5e19b062fa91dbcb74 589 Pfam PF15975 Flotillin 418 540 1.0E-32 T 11-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 AVL55_12495 0d9691858ee97c5e19b062fa91dbcb74 589 SUPERFAMILY SSF117892 62 203 5.23E-21 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AVL55_12495 0d9691858ee97c5e19b062fa91dbcb74 589 SMART SM00244 31 200 9.2E-4 T 11-10-2018 IPR001107 Band 7 domain AVL55_12495 0d9691858ee97c5e19b062fa91dbcb74 589 Pfam PF01145 SPFH domain / Band 7 family 44 217 7.6E-18 T 11-10-2018 IPR001107 Band 7 domain AVL55_02710 5058dddb7abcc9aee4fa508198497bc4 180 PRINTS PR00502 NUDIX hydrolase family signature 47 62 8.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AVL55_02710 5058dddb7abcc9aee4fa508198497bc4 180 PRINTS PR00502 NUDIX hydrolase family signature 33 47 8.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AVL55_02710 5058dddb7abcc9aee4fa508198497bc4 180 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AVL55_02710 5058dddb7abcc9aee4fa508198497bc4 180 SUPERFAMILY SSF55811 7 154 5.15E-31 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_02710 5058dddb7abcc9aee4fa508198497bc4 180 Gene3D G3DSA:3.90.79.10 1 160 9.6E-48 T 11-10-2018 AVL55_02710 5058dddb7abcc9aee4fa508198497bc4 180 Pfam PF00293 NUDIX domain 7 146 6.8E-26 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AVL55_02710 5058dddb7abcc9aee4fa508198497bc4 180 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.583 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH AVL55_06575 a8572062d1c406f38571106d912ed280 318 Gene3D G3DSA:3.40.50.300 1 202 1.5E-48 T 11-10-2018 AVL55_06575 a8572062d1c406f38571106d912ed280 318 PIRSF PIRSF002849 1 318 1.1E-125 T 11-10-2018 AVL55_06575 a8572062d1c406f38571106d912ed280 318 SUPERFAMILY SSF52540 6 290 9.94E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06575 a8572062d1c406f38571106d912ed280 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 4.9E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AVL55_06575 a8572062d1c406f38571106d912ed280 318 Gene3D G3DSA:1.10.8.300 203 315 1.6E-34 T 11-10-2018 AVL55_09995 d4cb053852c669cc72c8360199c0a44f 479 Pfam PF04715 Anthranilate synthase component I, N terminal region 36 174 7.1E-21 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_09995 d4cb053852c669cc72c8360199c0a44f 479 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 130 469 9.8E-108 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AVL55_09995 d4cb053852c669cc72c8360199c0a44f 479 PRINTS PR00095 Anthranilate synthase component I signature 408 422 1.3E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_09995 d4cb053852c669cc72c8360199c0a44f 479 PRINTS PR00095 Anthranilate synthase component I signature 423 437 1.3E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_09995 d4cb053852c669cc72c8360199c0a44f 479 PRINTS PR00095 Anthranilate synthase component I signature 314 327 1.3E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_09995 d4cb053852c669cc72c8360199c0a44f 479 PRINTS PR00095 Anthranilate synthase component I signature 328 341 1.3E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AVL55_09995 d4cb053852c669cc72c8360199c0a44f 479 SUPERFAMILY SSF56322 34 475 4.32E-130 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AVL55_09995 d4cb053852c669cc72c8360199c0a44f 479 Gene3D G3DSA:3.60.120.10 20 476 1.9E-154 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AVL55_09995 d4cb053852c669cc72c8360199c0a44f 479 Pfam PF00425 chorismate binding enzyme 213 466 7.8E-93 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AVL55_00620 f641a70dab10781d213fc58bd0863268 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 2.1E-8 T 11-10-2018 AVL55_00620 f641a70dab10781d213fc58bd0863268 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.1E-8 T 11-10-2018 AVL55_00620 f641a70dab10781d213fc58bd0863268 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 2.1E-8 T 11-10-2018 AVL55_00620 f641a70dab10781d213fc58bd0863268 393 Pfam PF03486 HI0933-like protein 5 391 7.2E-152 T 11-10-2018 AVL55_00620 f641a70dab10781d213fc58bd0863268 393 Gene3D G3DSA:1.10.8.260 261 321 1.6E-127 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily AVL55_00620 f641a70dab10781d213fc58bd0863268 393 SUPERFAMILY SSF51905 4 393 3.04E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_00620 f641a70dab10781d213fc58bd0863268 393 Gene3D G3DSA:2.40.30.10 188 338 1.6E-127 T 11-10-2018 AVL55_00620 f641a70dab10781d213fc58bd0863268 393 Gene3D G3DSA:3.50.50.60 6 390 1.6E-127 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_00620 f641a70dab10781d213fc58bd0863268 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 1.7E-6 T 11-10-2018 AVL55_00620 f641a70dab10781d213fc58bd0863268 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.7E-6 T 11-10-2018 AVL55_00620 f641a70dab10781d213fc58bd0863268 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.7E-6 T 11-10-2018 AVL55_00620 f641a70dab10781d213fc58bd0863268 393 SUPERFAMILY SSF160996 190 337 1.44E-41 T 11-10-2018 AVL55_00620 f641a70dab10781d213fc58bd0863268 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 391 7.9E-131 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 Gene3D G3DSA:3.40.50.720 130 305 1.3E-137 T 11-10-2018 AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 1.6E-83 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 SUPERFAMILY SSF52283 1 360 5.02E-67 T 11-10-2018 AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 SUPERFAMILY SSF51735 137 303 3.94E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 7.7E-7 T 11-10-2018 AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 7.7E-7 T 11-10-2018 AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 SMART SM01002 149 297 1.3E-90 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 Gene3D G3DSA:3.40.50.720 3 353 1.3E-137 T 11-10-2018 AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 SMART SM01003 4 137 3.4E-80 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 374 1.1E-154 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.6E-48 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AVL55_10985 40f4bf707125d3f17649b13eaf7b53f4 377 PIRSF PIRSF000183 1 375 2.5E-153 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 SUPERFAMILY SSF46548 340 450 3.66E-21 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 Gene3D G3DSA:3.40.50.11540 149 296 4.9E-11 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 Gene3D G3DSA:1.10.1060.10 369 450 2.2E-11 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 Pfam PF13375 RnfC Barrel sandwich hybrid domain 19 120 3.1E-32 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 Pfam PF10531 SLBB domain 300 350 1.2E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 735 224.238 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 422 433 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 Pfam PF12838 4Fe-4S dicluster domain 383 435 1.5E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 SUPERFAMILY SSF142019 99 307 2.22E-62 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 18 451 2.4E-182 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AVL55_06425 bdd2fd53a0238c88ef9b90a6a366bb75 990 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 145 287 4.8E-47 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_18465 1e48e546180ae23561a983c620c2ffa6 476 Pfam PF00171 Aldehyde dehydrogenase family 19 468 9.0E-146 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AVL55_18465 1e48e546180ae23561a983c620c2ffa6 476 Gene3D G3DSA:3.40.309.10 252 440 1.5E-158 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AVL55_18465 1e48e546180ae23561a983c620c2ffa6 476 Gene3D G3DSA:3.40.605.10 27 461 1.5E-158 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_18465 1e48e546180ae23561a983c620c2ffa6 476 SUPERFAMILY SSF53720 7 472 6.15E-139 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_18465 1e48e546180ae23561a983c620c2ffa6 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 Gene3D G3DSA:3.30.565.10 381 542 1.1E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 540 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 485 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 499 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 520 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 432 540 2.6E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 Pfam PF00512 His Kinase A (phospho-acceptor) domain 304 379 1.2E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 SMART SM00387 430 543 1.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 Gene3D G3DSA:1.10.287.130 279 380 2.9E-19 T 11-10-2018 AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 SUPERFAMILY SSF47384 298 381 6.28E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_01135 f9d1f24bc21a4a52fa56e959b5da122b 548 SUPERFAMILY SSF55874 391 542 8.64E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 SUPERFAMILY SSF63882 6 175 4.97E-51 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 252 285 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 Pfam PF03454 MoeA C-terminal region (domain IV) 318 389 8.9E-18 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 SUPERFAMILY SSF53218 176 318 1.96E-37 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 Pfam PF00994 Probable molybdopterin binding domain 179 315 3.4E-19 T 11-10-2018 IPR001453 MoaB/Mog domain AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 Gene3D G3DSA:2.170.190.11 49 140 7.0E-127 T 11-10-2018 AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 SMART SM00852 179 316 6.1E-34 T 11-10-2018 IPR001453 MoaB/Mog domain AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 Gene3D G3DSA:3.90.105.10 25 173 7.0E-127 T 11-10-2018 AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 SUPERFAMILY SSF63867 317 389 1.19E-20 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 175 311 3.1E-27 T 11-10-2018 IPR001453 MoaB/Mog domain AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 Gene3D G3DSA:2.40.340.10 320 384 7.0E-127 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 Pfam PF03453 MoeA N-terminal region (domain I and II) 7 166 1.3E-45 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AVL55_11365 06c6c90140dcf1ddb9fd667c89d3d2af 391 Gene3D G3DSA:3.40.980.10 174 319 7.0E-127 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AVL55_06810 016ff102be2c952207e628d96783d28b 206 Pfam PF07499 RuvA, C-terminal domain 161 204 3.8E-13 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AVL55_06810 016ff102be2c952207e628d96783d28b 206 Gene3D G3DSA:1.10.150.20 67 139 1.0E-25 T 11-10-2018 AVL55_06810 016ff102be2c952207e628d96783d28b 206 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 1.9E-58 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AVL55_06810 016ff102be2c952207e628d96783d28b 206 Gene3D G3DSA:1.10.8.10 159 206 1.2E-18 T 11-10-2018 AVL55_06810 016ff102be2c952207e628d96783d28b 206 Pfam PF14520 Helix-hairpin-helix domain 72 130 7.1E-17 T 11-10-2018 AVL55_06810 016ff102be2c952207e628d96783d28b 206 SUPERFAMILY SSF46929 160 204 1.44E-10 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily AVL55_06810 016ff102be2c952207e628d96783d28b 206 Gene3D G3DSA:2.40.50.140 1 66 3.8E-28 T 11-10-2018 AVL55_06810 016ff102be2c952207e628d96783d28b 206 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 206 31.176 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AVL55_06810 016ff102be2c952207e628d96783d28b 206 SMART SM00278 73 92 85.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_06810 016ff102be2c952207e628d96783d28b 206 SMART SM00278 108 127 0.08 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_06810 016ff102be2c952207e628d96783d28b 206 Pfam PF01330 RuvA N terminal domain 1 62 2.8E-22 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AVL55_06810 016ff102be2c952207e628d96783d28b 206 SUPERFAMILY SSF50249 1 63 7.42E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_06810 016ff102be2c952207e628d96783d28b 206 SUPERFAMILY SSF47781 66 135 2.61E-20 T 11-10-2018 IPR010994 RuvA domain 2-like AVL55_02840 5fc39fb4d618c3a5fa624eff9914b8a1 267 Gene3D G3DSA:3.60.21.10 1 267 9.6E-51 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AVL55_02840 5fc39fb4d618c3a5fa624eff9914b8a1 267 SUPERFAMILY SSF56300 2 267 5.11E-40 T 11-10-2018 AVL55_02840 5fc39fb4d618c3a5fa624eff9914b8a1 267 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 219 267 5.0E-5 T 11-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AVL55_02840 5fc39fb4d618c3a5fa624eff9914b8a1 267 Pfam PF00149 Calcineurin-like phosphoesterase 3 212 8.5E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AVL55_01145 5a4b6b4d0167318850b1b4c859f52640 360 SUPERFAMILY SSF53335 193 339 2.76E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_01145 5a4b6b4d0167318850b1b4c859f52640 360 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 289 295 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AVL55_01145 5a4b6b4d0167318850b1b4c859f52640 360 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 3 360 38.967 T 11-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 AVL55_01145 5a4b6b4d0167318850b1b4c859f52640 360 Pfam PF05175 Methyltransferase small domain 191 357 9.4E-51 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AVL55_01145 5a4b6b4d0167318850b1b4c859f52640 360 Gene3D G3DSA:3.40.50.150 180 360 3.0E-39 T 11-10-2018 AVL55_01145 5a4b6b4d0167318850b1b4c859f52640 360 Gene3D G3DSA:3.40.50.150 1 175 1.5E-34 T 11-10-2018 AVL55_01145 5a4b6b4d0167318850b1b4c859f52640 360 Pfam PF08468 Methyltransferase small domain N-terminal 7 179 3.5E-29 T 11-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 AVL55_15910 c6d0964f4194f8bfacc82cdd6329a577 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AVL55_15910 c6d0964f4194f8bfacc82cdd6329a577 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 7.5E-20 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AVL55_15910 c6d0964f4194f8bfacc82cdd6329a577 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 114 6.3E-38 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AVL55_15910 c6d0964f4194f8bfacc82cdd6329a577 114 SUPERFAMILY SSF89360 8 103 1.44E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AVL55_15910 c6d0964f4194f8bfacc82cdd6329a577 114 Gene3D G3DSA:2.60.300.12 8 114 3.0E-33 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AVL55_15910 c6d0964f4194f8bfacc82cdd6329a577 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.116 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AVL55_18785 4d0ce8273577ae7df1031d02934fc404 867 SUPERFAMILY SSF82866 646 865 6.93E-32 T 11-10-2018 AVL55_18785 4d0ce8273577ae7df1031d02934fc404 867 Pfam PF03176 MMPL family 169 391 4.9E-14 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AVL55_18785 4d0ce8273577ae7df1031d02934fc404 867 Pfam PF03176 MMPL family 642 863 7.0E-19 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AVL55_18785 4d0ce8273577ae7df1031d02934fc404 867 SUPERFAMILY SSF82866 177 387 3.14E-28 T 11-10-2018 AVL55_18785 4d0ce8273577ae7df1031d02934fc404 867 Gene3D G3DSA:1.20.1640.10 694 866 1.2E-10 T 11-10-2018 AVL55_18785 4d0ce8273577ae7df1031d02934fc404 867 Gene3D G3DSA:1.20.1640.10 193 400 1.8E-14 T 11-10-2018 AVL55_02410 d2cd0f5c2b5dec107dd5136eeb21d231 151 SUPERFAMILY SSF55729 1 150 1.5E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_02410 d2cd0f5c2b5dec107dd5136eeb21d231 151 Pfam PF00583 Acetyltransferase (GNAT) family 32 129 8.2E-10 T 11-10-2018 IPR000182 GNAT domain AVL55_02410 d2cd0f5c2b5dec107dd5136eeb21d231 151 Gene3D G3DSA:3.40.630.30 1 151 3.4E-35 T 11-10-2018 AVL55_13350 95b545b2ad29697323f036374f36ad41 220 SUPERFAMILY SSF63380 1 92 4.76E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_13350 95b545b2ad29697323f036374f36ad41 220 PIRSF PIRSF000498 1 212 2.5E-78 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13350 95b545b2ad29697323f036374f36ad41 220 Pfam PF00677 Lumazine binding domain 3 87 5.2E-20 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13350 95b545b2ad29697323f036374f36ad41 220 Pfam PF00677 Lumazine binding domain 100 184 1.5E-24 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13350 95b545b2ad29697323f036374f36ad41 220 Gene3D G3DSA:2.40.30.20 102 204 2.2E-36 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_13350 95b545b2ad29697323f036374f36ad41 220 Gene3D G3DSA:2.40.30.20 1 89 9.0E-26 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_13350 95b545b2ad29697323f036374f36ad41 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 4.7E-68 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13350 95b545b2ad29697323f036374f36ad41 220 SUPERFAMILY SSF63380 93 194 3.83E-34 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_10040 82af054205640a80707d902d05960ed4 286 SUPERFAMILY SSF54637 4 112 2.11E-40 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_10040 82af054205640a80707d902d05960ed4 286 SUPERFAMILY SSF54637 114 283 3.07E-53 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_10040 82af054205640a80707d902d05960ed4 286 Pfam PF13622 Thioesterase-like superfamily 24 281 1.5E-62 T 11-10-2018 AVL55_10040 82af054205640a80707d902d05960ed4 286 Gene3D G3DSA:3.10.129.90 3 284 2.7E-100 T 11-10-2018 AVL55_10040 82af054205640a80707d902d05960ed4 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 10 282 6.8E-90 T 11-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 AVL55_08070 60fd11412d7a0c29ef6012adc3a6b349 416 SUPERFAMILY SSF82689 219 317 1.83E-21 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AVL55_08070 60fd11412d7a0c29ef6012adc3a6b349 416 SUPERFAMILY SSF50182 151 217 2.16E-16 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_08070 60fd11412d7a0c29ef6012adc3a6b349 416 Pfam PF00924 Mechanosensitive ion channel 109 308 1.2E-42 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_08070 60fd11412d7a0c29ef6012adc3a6b349 416 Gene3D G3DSA:2.30.30.60 167 217 9.7E-12 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_08070 60fd11412d7a0c29ef6012adc3a6b349 416 Gene3D G3DSA:3.30.70.100 218 311 1.5E-20 T 11-10-2018 AVL55_04125 19bdf35c3c8efccf6e0592ea29329b4d 473 Pfam PF03572 Peptidase family S41 246 452 6.7E-18 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AVL55_04125 19bdf35c3c8efccf6e0592ea29329b4d 473 SMART SM00245 257 454 0.0022 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AVL55_04125 19bdf35c3c8efccf6e0592ea29329b4d 473 SUPERFAMILY SSF52096 228 456 5.47E-26 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_17365 accdb90f4f2d29a45dd4a1c3d0bb5729 249 Gene3D G3DSA:3.90.550.10 1 244 3.8E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17365 accdb90f4f2d29a45dd4a1c3d0bb5729 249 Pfam PF02348 Cytidylyltransferase 8 215 8.2E-34 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AVL55_17365 accdb90f4f2d29a45dd4a1c3d0bb5729 249 SUPERFAMILY SSF53448 9 242 1.64E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_11515 37d64eda3e5c8cd2654ddf012ba61c72 72 Pfam PF10981 Protein of unknown function (DUF2788) 17 67 1.4E-19 T 11-10-2018 IPR021249 Protein of unknown function DUF2788 AVL55_12800 f347963f63a19f4c1e002bfb1f717085 203 SUPERFAMILY SSF46689 7 78 8.98E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_12800 f347963f63a19f4c1e002bfb1f717085 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 2.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_12800 f347963f63a19f4c1e002bfb1f717085 203 Pfam PF13305 WHG domain 92 178 2.3E-14 T 11-10-2018 IPR025996 WHG domain AVL55_12800 f347963f63a19f4c1e002bfb1f717085 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 9.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_12800 f347963f63a19f4c1e002bfb1f717085 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 9.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_12800 f347963f63a19f4c1e002bfb1f717085 203 SUPERFAMILY SSF48498 89 196 7.31E-20 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AVL55_12800 f347963f63a19f4c1e002bfb1f717085 203 Gene3D G3DSA:1.10.357.10 2 201 2.4E-53 T 11-10-2018 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 667 3.5E-10 T 11-10-2018 IPR001357 BRCT domain AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SMART SM00532 7 454 5.9E-269 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SMART SM00278 550 569 80.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SMART SM00278 486 505 230.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SMART SM00278 518 537 200.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SMART SM00278 452 471 760.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SUPERFAMILY SSF56091 5 322 1.87E-117 T 11-10-2018 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 119 148 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SUPERFAMILY SSF52113 598 674 1.08E-17 T 11-10-2018 IPR036420 BRCT domain superfamily AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 413 440 4.8E-10 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 15 668 4.0E-261 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 PIRSF PIRSF001604 1 678 1.3E-251 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 337 352 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Hamap MF_01588 DNA ligase [ligA]. 6 673 52.888 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SUPERFAMILY SSF50249 324 405 3.43E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Gene3D G3DSA:1.10.287.610 5 72 3.1E-24 T 11-10-2018 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SUPERFAMILY SSF47781 410 589 7.04E-60 T 11-10-2018 IPR010994 RuvA domain 2-like AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Gene3D G3DSA:3.30.470.90 73 323 6.5E-98 T 11-10-2018 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Gene3D G3DSA:1.10.150.20 438 511 8.6E-29 T 11-10-2018 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Gene3D G3DSA:2.20.70.80 397 437 6.0E-17 T 11-10-2018 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Gene3D G3DSA:2.40.50.140 324 396 1.3E-34 T 11-10-2018 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 328 404 5.0E-35 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Gene3D G3DSA:3.40.50.10190 591 676 1.0E-24 T 11-10-2018 IPR036420 BRCT domain superfamily AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Pfam PF12826 Helix-hairpin-helix motif 516 579 2.0E-23 T 11-10-2018 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 324 5.8E-128 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 Gene3D G3DSA:1.10.150.20 512 590 3.0E-30 T 11-10-2018 AVL55_09480 730ca85ba57a71e528b4eea876e688f6 678 SMART SM00292 599 676 9.2E-10 T 11-10-2018 IPR001357 BRCT domain AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 SUPERFAMILY SSF50104 2 63 2.31E-20 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 SUPERFAMILY SSF50249 130 187 1.23E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 Gene3D G3DSA:2.40.50.140 66 129 4.5E-28 T 11-10-2018 AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 PIRSF PIRSF005901 2 188 2.8E-65 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.0E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 1.7E-78 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 SMART SM00841 131 186 2.3E-33 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 6.7E-26 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 Gene3D G3DSA:2.30.30.30 1 64 1.2E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 SMART SM01185 69 123 1.1E-24 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 1.0E-24 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 SUPERFAMILY SSF50249 69 128 8.57E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 Gene3D G3DSA:2.40.50.140 130 188 3.9E-28 T 11-10-2018 AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AVL55_02885 e64aa9bd9bc4f90e7f963d15871b67ba 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.458 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AVL55_16635 70f092dba7891ce25e0a479fbde4126d 273 Pfam PF01925 Sulfite exporter TauE/SafE 13 267 1.2E-40 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 SUPERFAMILY SSF52540 3 301 3.55E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.757 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 SUPERFAMILY SSF81271 279 363 2.62E-36 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 Gene3D G3DSA:1.10.150.300 113 200 2.2E-152 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 Gene3D G3DSA:3.10.20.30 48 361 2.2E-152 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.4E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 PIRSF PIRSF006641 1 363 2.8E-157 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.8E-39 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 Gene3D G3DSA:3.40.50.300 4 278 2.2E-152 T 11-10-2018 AVL55_07595 4939e650ec58f78f710ccb956f501da2 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 6.4E-168 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 Pfam PF08264 Anticodon-binding domain of tRNA 687 842 2.1E-25 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 SUPERFAMILY SSF52374 4 651 1.54E-139 T 11-10-2018 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 Gene3D G3DSA:3.40.50.620 25 632 1.1E-240 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 SUPERFAMILY SSF50677 203 407 6.38E-56 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 Gene3D G3DSA:3.90.740.10 195 412 1.1E-240 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 643 2.1E-213 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 SUPERFAMILY SSF47323 655 930 3.11E-71 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 Gene3D G3DSA:1.10.730.20 643 930 4.2E-86 T 11-10-2018 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 930 21.291 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 1.2E-288 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 Pfam PF06827 Zinc finger found in FPG and IleRS 899 927 3.7E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 405 420 2.7E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 530 543 2.7E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.7E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 564 573 2.7E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AVL55_13565 d68d78fd737540d4863ebb5514c3e58f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 2.7E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AVL55_04595 6e40cda6f641e1adcc7129c34cecb9d1 104 Pfam PF12836 Helix-hairpin-helix motif 39 101 9.3E-23 T 11-10-2018 AVL55_04595 6e40cda6f641e1adcc7129c34cecb9d1 104 SUPERFAMILY SSF47781 32 98 8.34E-25 T 11-10-2018 IPR010994 RuvA domain 2-like AVL55_04595 6e40cda6f641e1adcc7129c34cecb9d1 104 Gene3D G3DSA:1.10.150.280 31 102 8.2E-23 T 11-10-2018 AVL55_04595 6e40cda6f641e1adcc7129c34cecb9d1 104 SMART SM00278 81 100 4.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_04595 6e40cda6f641e1adcc7129c34cecb9d1 104 SMART SM00278 51 70 0.39 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AVL55_04595 6e40cda6f641e1adcc7129c34cecb9d1 104 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 99 4.9E-20 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 Gene3D G3DSA:3.40.50.720 1 254 3.0E-88 T 11-10-2018 AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.7E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.7E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.7E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.7E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 2.7E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.7E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 253 3.3E-69 T 11-10-2018 AVL55_11445 c7e868fd71f7d5302a285712c48790e7 255 SUPERFAMILY SSF51735 8 254 1.0E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_19380 c1dce44fb16a049cd87be87910d17453 159 Pfam PF04612 Type II secretion system (T2SS), protein M 1 157 1.7E-45 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AVL55_19380 c1dce44fb16a049cd87be87910d17453 159 SUPERFAMILY SSF103054 82 157 8.11E-22 T 11-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily AVL55_19380 c1dce44fb16a049cd87be87910d17453 159 Gene3D G3DSA:3.30.1360.100 82 159 7.8E-24 T 11-10-2018 AVL55_19380 c1dce44fb16a049cd87be87910d17453 159 PIRSF PIRSF006291 1 159 6.5E-49 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AVL55_07665 ad3a7af5d13baa7c52d505dc90335925 284 Gene3D G3DSA:3.20.20.70 2 282 2.0E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07665 ad3a7af5d13baa7c52d505dc90335925 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 20 274 2.8E-114 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AVL55_07665 ad3a7af5d13baa7c52d505dc90335925 284 SUPERFAMILY SSF51569 5 277 1.1E-100 T 11-10-2018 AVL55_07665 ad3a7af5d13baa7c52d505dc90335925 284 Pfam PF00793 DAHP synthetase I family 17 273 1.3E-65 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AVL55_07665 ad3a7af5d13baa7c52d505dc90335925 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 15 276 49.225 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AVL55_08450 ac2b2432e2f51ab6ac9428083316d236 476 Gene3D G3DSA:3.30.420.10 2 196 4.4E-70 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_08450 ac2b2432e2f51ab6ac9428083316d236 476 Gene3D G3DSA:2.30.30.450 209 349 1.8E-43 T 11-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily AVL55_08450 ac2b2432e2f51ab6ac9428083316d236 476 SMART SM00479 5 198 0.0042 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_08450 ac2b2432e2f51ab6ac9428083316d236 476 Gene3D G3DSA:1.20.1280.70 356 416 2.1E-15 T 11-10-2018 AVL55_08450 ac2b2432e2f51ab6ac9428083316d236 476 Pfam PF00929 Exonuclease 7 188 2.6E-24 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_08450 ac2b2432e2f51ab6ac9428083316d236 476 PIRSF PIRSF000977 1 476 6.5E-185 T 11-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AVL55_08450 ac2b2432e2f51ab6ac9428083316d236 476 SUPERFAMILY SSF53098 5 476 3.64E-123 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_08450 ac2b2432e2f51ab6ac9428083316d236 476 Pfam PF08411 Exonuclease C-terminal 207 474 8.7E-87 T 11-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 SMART SM00926 13 67 6.0E-14 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 Pfam PF01568 Molydopterin dinucleotide binding domain 629 745 2.1E-23 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 Gene3D G3DSA:3.40.228.10 160 358 3.8E-97 T 11-10-2018 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 Pfam PF00384 Molybdopterin oxidoreductase 70 505 1.7E-38 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 SUPERFAMILY SSF53706 15 519 5.76E-119 T 11-10-2018 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 Gene3D G3DSA:3.40.50.740 96 507 3.8E-97 T 11-10-2018 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 Gene3D G3DSA:2.20.25.90 7 72 3.6E-16 T 11-10-2018 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 Gene3D G3DSA:2.40.40.20 615 755 2.1E-30 T 11-10-2018 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 61 9.5E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_17730 ca05bba0752aea9cd5cac3b73faf17ae 755 SUPERFAMILY SSF50692 624 754 6.33E-32 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AVL55_01150 0affd9c8379d62adcc24e14402e4aa68 239 Pfam PF02390 Putative methyltransferase 64 233 1.1E-60 T 11-10-2018 AVL55_01150 0affd9c8379d62adcc24e14402e4aa68 239 SUPERFAMILY SSF53335 16 237 5.27E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_01150 0affd9c8379d62adcc24e14402e4aa68 239 Gene3D G3DSA:3.40.50.150 30 239 2.3E-70 T 11-10-2018 AVL55_01150 0affd9c8379d62adcc24e14402e4aa68 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 48 238 2.8E-69 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AVL55_01150 0affd9c8379d62adcc24e14402e4aa68 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.726 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AVL55_05380 b7ce9d6c8cac89e471861fe13d14c8c1 297 SUPERFAMILY SSF161098 90 278 6.54E-24 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_05380 b7ce9d6c8cac89e471861fe13d14c8c1 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 7.1E-13 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AVL55_05380 b7ce9d6c8cac89e471861fe13d14c8c1 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 296 1.6E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_05380 b7ce9d6c8cac89e471861fe13d14c8c1 297 Gene3D G3DSA:1.10.3720.10 86 294 6.6E-19 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_03030 dea56cca25fc78ea675c8edb29ec9c12 327 Gene3D G3DSA:1.20.1270.170 151 308 2.3E-124 T 11-10-2018 AVL55_03030 dea56cca25fc78ea675c8edb29ec9c12 327 Pfam PF01636 Phosphotransferase enzyme family 34 257 1.5E-39 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AVL55_03030 dea56cca25fc78ea675c8edb29ec9c12 327 Gene3D G3DSA:1.10.510.10 58 259 2.3E-124 T 11-10-2018 AVL55_03030 dea56cca25fc78ea675c8edb29ec9c12 327 SUPERFAMILY SSF56112 4 324 2.17E-84 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_03030 dea56cca25fc78ea675c8edb29ec9c12 327 Hamap MF_01497 Stress response kinase A [srkA]. 2 319 47.609 T 11-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AVL55_03030 dea56cca25fc78ea675c8edb29ec9c12 327 Gene3D G3DSA:3.30.200.70 11 110 2.3E-124 T 11-10-2018 AVL55_08200 a180212d1a4e029447ad67af342bc686 420 SUPERFAMILY SSF53756 20 403 9.03E-59 T 11-10-2018 AVL55_08200 a180212d1a4e029447ad67af342bc686 420 Gene3D G3DSA:3.40.50.2000 207 392 1.6E-54 T 11-10-2018 AVL55_08200 a180212d1a4e029447ad67af342bc686 420 Gene3D G3DSA:3.40.50.2000 103 401 1.6E-54 T 11-10-2018 AVL55_08200 a180212d1a4e029447ad67af342bc686 420 Pfam PF00534 Glycosyl transferases group 1 212 384 8.6E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_15330 43b1e8e2964b074fa86f6fb6540b1fe8 231 Gene3D G3DSA:3.40.50.300 1 212 8.9E-46 T 11-10-2018 AVL55_15330 43b1e8e2964b074fa86f6fb6540b1fe8 231 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 181 1.4E-12 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AVL55_15330 43b1e8e2964b074fa86f6fb6540b1fe8 231 PIRSF PIRSF009320 1 219 6.6E-38 T 11-10-2018 AVL55_15330 43b1e8e2964b074fa86f6fb6540b1fe8 231 SUPERFAMILY SSF52540 1 212 8.89E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11290 df906dea1f21c9aeb78d1d0c89485f1d 245 Gene3D G3DSA:3.40.50.300 1 174 7.1E-27 T 11-10-2018 AVL55_11290 df906dea1f21c9aeb78d1d0c89485f1d 245 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 2 242 2.2E-64 T 11-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AVL55_11290 df906dea1f21c9aeb78d1d0c89485f1d 245 Pfam PF00308 Bacterial dnaA protein 58 226 6.8E-13 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AVL55_11290 df906dea1f21c9aeb78d1d0c89485f1d 245 SUPERFAMILY SSF52540 11 222 1.16E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11290 df906dea1f21c9aeb78d1d0c89485f1d 245 Gene3D G3DSA:1.10.8.60 177 244 8.7E-19 T 11-10-2018 AVL55_19705 be6e06a2eb2f6df44bcc65bfcca9e853 338 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 244 260 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AVL55_19705 be6e06a2eb2f6df44bcc65bfcca9e853 338 SUPERFAMILY SSF51735 124 308 1.49E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_19705 be6e06a2eb2f6df44bcc65bfcca9e853 338 Gene3D G3DSA:3.40.50.720 49 330 1.0E-99 T 11-10-2018 AVL55_19705 be6e06a2eb2f6df44bcc65bfcca9e853 338 Gene3D G3DSA:3.40.50.720 120 306 1.0E-99 T 11-10-2018 AVL55_19705 be6e06a2eb2f6df44bcc65bfcca9e853 338 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 131 307 1.8E-50 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AVL55_19705 be6e06a2eb2f6df44bcc65bfcca9e853 338 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 45 324 1.8E-19 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AVL55_19705 be6e06a2eb2f6df44bcc65bfcca9e853 338 SUPERFAMILY SSF52283 47 159 3.97E-25 T 11-10-2018 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Gene3D G3DSA:3.90.740.10 200 236 7.0E-6 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Gene3D G3DSA:3.40.50.620 3 199 9.0E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 905 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 PRINTS PR00986 Valyl-tRNA synthetase signature 474 492 4.4E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 4.4E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 PRINTS PR00986 Valyl-tRNA synthetase signature 343 356 4.4E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 PRINTS PR00986 Valyl-tRNA synthetase signature 443 464 4.4E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 PRINTS PR00986 Valyl-tRNA synthetase signature 227 244 4.4E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 SUPERFAMILY SSF47323 610 872 1.12E-68 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Gene3D G3DSA:3.40.50.620 310 523 8.9E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 SUPERFAMILY SSF50677 187 339 1.05E-65 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Pfam PF08264 Anticodon-binding domain of tRNA 642 797 1.3E-43 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 13 599 2.8E-217 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 857 921 1.4E-15 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Gene3D G3DSA:1.10.287.380 850 922 1.5E-18 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 SUPERFAMILY SSF52374 1 609 1.25E-136 T 11-10-2018 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Gene3D G3DSA:3.90.740.10 237 308 1.1E-9 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 SUPERFAMILY SSF46589 857 921 3.35E-16 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Gene3D G3DSA:1.10.730.10 547 790 1.3E-70 T 11-10-2018 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_16060 bf8b0fda4bdda5fb87c79e8a34d67c24 924 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 922 16.277 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AVL55_15585 cc14ab0b660c397854b74d15f76ec9b1 226 SMART SM00862 146 221 3.3E-29 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_15585 cc14ab0b660c397854b74d15f76ec9b1 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.1E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_15585 cc14ab0b660c397854b74d15f76ec9b1 226 SUPERFAMILY SSF52172 1 181 4.55E-36 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_15585 cc14ab0b660c397854b74d15f76ec9b1 226 Gene3D G3DSA:1.10.10.10 118 224 2.0E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_15585 cc14ab0b660c397854b74d15f76ec9b1 226 Pfam PF00072 Response regulator receiver domain 3 113 1.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15585 cc14ab0b660c397854b74d15f76ec9b1 226 SMART SM00448 1 112 5.5E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15585 cc14ab0b660c397854b74d15f76ec9b1 226 Gene3D G3DSA:3.40.50.2300 1 117 1.0E-34 T 11-10-2018 AVL55_19425 9aaed210181e31faf2a8b8101355f84a 194 Pfam PF04264 YceI-like domain 26 192 1.1E-14 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AVL55_19425 9aaed210181e31faf2a8b8101355f84a 194 PIRSF PIRSF029811 1 194 1.9E-58 T 11-10-2018 IPR027016 Uncharacterised protein with YceI domain AVL55_19425 9aaed210181e31faf2a8b8101355f84a 194 Gene3D G3DSA:2.40.128.110 22 194 8.0E-52 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AVL55_19425 9aaed210181e31faf2a8b8101355f84a 194 SUPERFAMILY SSF101874 22 193 1.83E-24 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AVL55_19425 9aaed210181e31faf2a8b8101355f84a 194 SMART SM00867 25 193 3.2E-20 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AVL55_03720 9ed7f7354d274453cf493ea08d7484bc 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.9E-30 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AVL55_03720 9ed7f7354d274453cf493ea08d7484bc 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.9E-30 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AVL55_03720 9ed7f7354d274453cf493ea08d7484bc 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.9E-30 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AVL55_03720 9ed7f7354d274453cf493ea08d7484bc 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.9E-30 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AVL55_03720 9ed7f7354d274453cf493ea08d7484bc 396 SUPERFAMILY SSF53383 3 393 1.41E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_03720 9ed7f7354d274453cf493ea08d7484bc 396 Gene3D G3DSA:3.40.640.10 60 300 1.2E-150 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_03720 9ed7f7354d274453cf493ea08d7484bc 396 Gene3D G3DSA:3.90.1150.10 6 392 1.2E-150 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_03720 9ed7f7354d274453cf493ea08d7484bc 396 Pfam PF00155 Aminotransferase class I and II 27 392 1.1E-72 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_03720 9ed7f7354d274453cf493ea08d7484bc 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AVL55_09410 ffe22993dc05fa81d3f5a93b7990b966 134 Pfam PF01124 MAPEG family 13 128 1.1E-14 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AVL55_09410 ffe22993dc05fa81d3f5a93b7990b966 134 Gene3D G3DSA:1.20.120.550 4 132 2.3E-10 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AVL55_09410 ffe22993dc05fa81d3f5a93b7990b966 134 SUPERFAMILY SSF161084 6 125 2.62E-20 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AVL55_19925 bd13d2d6f4c24509af856ec6e5690f5c 1003 Pfam PF00593 TonB dependent receptor 455 1002 4.9E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_19925 bd13d2d6f4c24509af856ec6e5690f5c 1003 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 42 1003 4.9E-197 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AVL55_19925 bd13d2d6f4c24509af856ec6e5690f5c 1003 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 166 3.5E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_19925 bd13d2d6f4c24509af856ec6e5690f5c 1003 Gene3D G3DSA:2.170.130.10 31 176 4.4E-18 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_19925 bd13d2d6f4c24509af856ec6e5690f5c 1003 SUPERFAMILY SSF56935 31 1003 1.44E-86 T 11-10-2018 AVL55_04370 ff4ece682ff1b6d3bea73b10f6778af2 408 Gene3D G3DSA:3.40.50.300 216 385 1.9E-51 T 11-10-2018 AVL55_04370 ff4ece682ff1b6d3bea73b10f6778af2 408 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 1 408 49.78 T 11-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AVL55_04370 ff4ece682ff1b6d3bea73b10f6778af2 408 Pfam PF00271 Helicase conserved C-terminal domain 233 340 8.0E-33 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_04370 ff4ece682ff1b6d3bea73b10f6778af2 408 Gene3D G3DSA:3.40.50.300 1 209 1.2E-69 T 11-10-2018 AVL55_04370 ff4ece682ff1b6d3bea73b10f6778af2 408 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.8E-43 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_04370 ff4ece682ff1b6d3bea73b10f6778af2 408 SMART SM00490 259 340 2.8E-33 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_04370 ff4ece682ff1b6d3bea73b10f6778af2 408 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AVL55_04370 ff4ece682ff1b6d3bea73b10f6778af2 408 SUPERFAMILY SSF52540 74 357 1.28E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04370 ff4ece682ff1b6d3bea73b10f6778af2 408 SMART SM00487 20 222 3.4E-54 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_09000 13c4e65e9dc482a58ca0bb5ecc613f6b 407 SUPERFAMILY SSF51395 4 350 1.4E-100 T 11-10-2018 AVL55_09000 13c4e65e9dc482a58ca0bb5ecc613f6b 407 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 342 9.3E-54 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AVL55_09000 13c4e65e9dc482a58ca0bb5ecc613f6b 407 Gene3D G3DSA:3.20.20.70 5 354 1.3E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07035 505dc92985e7ecdc4d8d1f491e578e9f 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_07035 505dc92985e7ecdc4d8d1f491e578e9f 421 PIRSF PIRSF000521 175 421 2.2E-22 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_07035 505dc92985e7ecdc4d8d1f491e578e9f 421 PIRSF PIRSF000521 25 155 7.7E-8 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_07035 505dc92985e7ecdc4d8d1f491e578e9f 421 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 11 420 3.6E-183 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AVL55_07035 505dc92985e7ecdc4d8d1f491e578e9f 421 Pfam PF00202 Aminotransferase class-III 25 419 2.3E-127 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_07035 505dc92985e7ecdc4d8d1f491e578e9f 421 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 421 47.762 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AVL55_07035 505dc92985e7ecdc4d8d1f491e578e9f 421 Gene3D G3DSA:3.40.640.10 59 329 5.5E-168 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_07035 505dc92985e7ecdc4d8d1f491e578e9f 421 Gene3D G3DSA:3.90.1150.10 8 414 5.5E-168 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_07035 505dc92985e7ecdc4d8d1f491e578e9f 421 SUPERFAMILY SSF53383 4 421 4.63E-128 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_04790 899a7e28980cf9731e651ae92edbd540 207 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 47 188 44.809 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AVL55_04790 899a7e28980cf9731e651ae92edbd540 207 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 92 129 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AVL55_04790 899a7e28980cf9731e651ae92edbd540 207 SUPERFAMILY SSF53927 28 192 1.04E-55 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AVL55_04790 899a7e28980cf9731e651ae92edbd540 207 Pfam PF14437 MafB19-like deaminase 45 188 6.8E-34 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AVL55_04790 899a7e28980cf9731e651ae92edbd540 207 Gene3D G3DSA:3.40.140.10 36 201 2.1E-61 T 11-10-2018 AVL55_03880 5c2694e7c660664d1fc6fa07ec639feb 824 SUPERFAMILY SSF56935 52 823 4.27E-95 T 11-10-2018 AVL55_03880 5c2694e7c660664d1fc6fa07ec639feb 824 Pfam PF00593 TonB dependent receptor 335 821 6.2E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_03880 5c2694e7c660664d1fc6fa07ec639feb 824 Gene3D G3DSA:2.40.170.20 71 824 2.3E-110 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_03880 5c2694e7c660664d1fc6fa07ec639feb 824 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 190 9.1E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_13770 ef0b9eaccf8f1c53e424940a476ba1dc 372 PIRSF PIRSF004640 1 364 2.3E-148 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AVL55_13770 ef0b9eaccf8f1c53e424940a476ba1dc 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 35.414 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AVL55_13770 ef0b9eaccf8f1c53e424940a476ba1dc 372 SUPERFAMILY SSF56014 265 354 4.22E-14 T 11-10-2018 AVL55_13770 ef0b9eaccf8f1c53e424940a476ba1dc 372 Gene3D G3DSA:3.30.413.10 262 362 1.9E-25 T 11-10-2018 AVL55_13770 ef0b9eaccf8f1c53e424940a476ba1dc 372 Pfam PF04551 GcpE protein 13 354 2.9E-135 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AVL55_13770 ef0b9eaccf8f1c53e424940a476ba1dc 372 SUPERFAMILY SSF51604 40 139 8.83E-8 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AVL55_13770 ef0b9eaccf8f1c53e424940a476ba1dc 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 1.2E-130 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AVL55_13770 ef0b9eaccf8f1c53e424940a476ba1dc 372 Gene3D G3DSA:3.20.20.20 1 261 5.9E-108 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_18290 a68ae68a3000d22b23fd9503017e5020 613 Pfam PF00664 ABC transporter transmembrane region 44 308 1.8E-22 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AVL55_18290 a68ae68a3000d22b23fd9503017e5020 613 Gene3D G3DSA:1.20.1560.10 25 336 5.2E-26 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_18290 a68ae68a3000d22b23fd9503017e5020 613 SUPERFAMILY SSF52540 354 605 5.83E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18290 a68ae68a3000d22b23fd9503017e5020 613 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_18290 a68ae68a3000d22b23fd9503017e5020 613 Pfam PF00005 ABC transporter 382 535 2.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_18290 a68ae68a3000d22b23fd9503017e5020 613 SUPERFAMILY SSF90123 30 342 3.92E-53 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_18290 a68ae68a3000d22b23fd9503017e5020 613 Gene3D G3DSA:3.40.50.300 354 606 8.1E-98 T 11-10-2018 AVL55_18290 a68ae68a3000d22b23fd9503017e5020 613 SMART SM00382 390 581 7.7E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_16425 10e00fe081edf176977cceaad45ecfde 225 SUPERFAMILY SSF52172 1 126 3.84E-26 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_16425 10e00fe081edf176977cceaad45ecfde 225 SMART SM00448 1 114 9.3E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16425 10e00fe081edf176977cceaad45ecfde 225 Pfam PF00072 Response regulator receiver domain 3 114 1.7E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16425 10e00fe081edf176977cceaad45ecfde 225 SUPERFAMILY SSF46894 139 191 1.16E-10 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_16425 10e00fe081edf176977cceaad45ecfde 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 191 9.5E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16425 10e00fe081edf176977cceaad45ecfde 225 Gene3D G3DSA:3.40.50.12740 1 206 4.5E-43 T 11-10-2018 AVL55_16425 10e00fe081edf176977cceaad45ecfde 225 SMART SM00421 144 201 0.0036 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 Gene3D G3DSA:3.20.20.70 1 277 1.2E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 Gene3D G3DSA:3.30.160.270 394 501 2.6E-12 T 11-10-2018 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 SMART SM00917 369 501 6.4E-36 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 42.474 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 Pfam PF00682 HMGL-like 4 273 9.3E-98 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 SUPERFAMILY SSF110921 389 499 1.06E-24 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 1.1E-233 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 500 4.6E-32 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 Gene3D G3DSA:1.10.238.260 280 393 7.6E-33 T 11-10-2018 AVL55_04420 9142fd01df4bf71ebe88b7aa465065bd 519 SUPERFAMILY SSF51569 1 291 3.66E-100 T 11-10-2018 AVL55_08325 e86ca3795045c3b6c934ca164714d3d2 213 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 5 200 4.6E-14 T 11-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 AVL55_08325 e86ca3795045c3b6c934ca164714d3d2 213 Gene3D G3DSA:1.10.1760.20 3 200 6.0E-6 T 11-10-2018 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 Gene3D G3DSA:3.50.50.60 12 372 1.5E-135 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 16 33 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 Pfam PF01266 FAD dependent oxidoreductase 12 330 7.8E-53 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 SUPERFAMILY SSF54373 232 325 4.71E-8 T 11-10-2018 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 Gene3D G3DSA:3.30.9.10 89 326 1.5E-135 T 11-10-2018 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 Gene3D G3DSA:1.10.8.870 398 466 1.7E-22 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 SUPERFAMILY SSF51905 9 375 4.37E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 387 491 2.9E-12 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 11 23 1.1E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 85 97 1.1E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 1.1E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 353 365 1.1E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 24 34 1.1E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_01045 223c4168205baaf7a5d0fd2a560c3b18 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 52 1.1E-27 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AVL55_08890 2d85a86ae8617f121add41377b70efde 518 Gene3D G3DSA:3.60.110.10 229 513 1.8E-58 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AVL55_08890 2d85a86ae8617f121add41377b70efde 518 SUPERFAMILY SSF56317 230 497 7.98E-61 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AVL55_08890 2d85a86ae8617f121add41377b70efde 518 Gene3D G3DSA:3.40.630.30 8 223 1.1E-52 T 11-10-2018 AVL55_08890 2d85a86ae8617f121add41377b70efde 518 SUPERFAMILY SSF55729 17 151 1.72E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_08890 2d85a86ae8617f121add41377b70efde 518 Pfam PF00795 Carbon-nitrogen hydrolase 234 491 8.5E-36 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AVL55_08890 2d85a86ae8617f121add41377b70efde 518 Pfam PF00583 Acetyltransferase (GNAT) family 56 151 1.9E-7 T 11-10-2018 IPR000182 GNAT domain AVL55_13260 8954fc1e5b5fc5006a6ef1c73bfb6d6b 247 SUPERFAMILY SSF51182 140 231 8.07E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_13260 8954fc1e5b5fc5006a6ef1c73bfb6d6b 247 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 5 243 2.3E-46 T 11-10-2018 IPR012807 Anti-sigma factor ChrR, putative AVL55_13260 8954fc1e5b5fc5006a6ef1c73bfb6d6b 247 Gene3D G3DSA:2.60.120.10 135 226 4.9E-21 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_13260 8954fc1e5b5fc5006a6ef1c73bfb6d6b 247 Gene3D G3DSA:1.10.10.1320 1 134 1.7E-12 T 11-10-2018 AVL55_13260 8954fc1e5b5fc5006a6ef1c73bfb6d6b 247 Pfam PF12973 ChrR Cupin-like domain 141 221 2.5E-12 T 11-10-2018 IPR025979 ChrR-like cupin domain AVL55_01345 865c928a14058c34da4fae9e8865cf5b 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 471 1.4E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_01345 865c928a14058c34da4fae9e8865cf5b 479 Gene3D G3DSA:1.10.287.130 207 323 9.2E-8 T 11-10-2018 AVL55_01345 865c928a14058c34da4fae9e8865cf5b 479 Gene3D G3DSA:3.30.565.10 327 477 1.2E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_01345 865c928a14058c34da4fae9e8865cf5b 479 SMART SM00387 363 476 6.8E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_01345 865c928a14058c34da4fae9e8865cf5b 479 SUPERFAMILY SSF55874 330 473 1.31E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_01345 865c928a14058c34da4fae9e8865cf5b 479 SUPERFAMILY SSF47384 241 320 3.73E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_13625 16f3c21adcf16086546a92eb4ad896ff 630 Pfam PF13616 PPIC-type PPIASE domain 267 366 3.3E-30 T 11-10-2018 AVL55_13625 16f3c21adcf16086546a92eb4ad896ff 630 SUPERFAMILY SSF109998 41 242 2.98E-36 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AVL55_13625 16f3c21adcf16086546a92eb4ad896ff 630 Pfam PF13624 SurA N-terminal domain 1 165 4.7E-48 T 11-10-2018 AVL55_13625 16f3c21adcf16086546a92eb4ad896ff 630 SUPERFAMILY SSF54534 266 369 1.9E-29 T 11-10-2018 AVL55_13625 16f3c21adcf16086546a92eb4ad896ff 630 Gene3D G3DSA:3.10.50.40 264 388 1.4E-36 T 11-10-2018 AVL55_13625 16f3c21adcf16086546a92eb4ad896ff 630 Gene3D G3DSA:1.10.4030.30 40 200 1.6E-18 T 11-10-2018 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 Pfam PF00012 Hsp70 protein 4 602 1.9E-263 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 SUPERFAMILY SSF100920 384 540 1.83E-61 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 Gene3D G3DSA:3.90.640.10 229 316 2.4E-167 T 11-10-2018 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 3.7E-288 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 Gene3D G3DSA:2.60.34.10 383 523 4.1E-65 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 SUPERFAMILY SSF100934 534 606 3.33E-6 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 Gene3D G3DSA:1.20.1270.10 524 607 9.5E-28 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 36.586 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 Gene3D G3DSA:3.30.420.40 180 366 2.4E-167 T 11-10-2018 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 SUPERFAMILY SSF53067 187 382 3.75E-67 T 11-10-2018 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 Gene3D G3DSA:3.30.420.40 5 379 2.4E-167 T 11-10-2018 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.2E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 SUPERFAMILY SSF53067 4 184 6.48E-66 T 11-10-2018 AVL55_07415 7ea42f1d3f194dfe90afb6b44a1444cf 642 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 SUPERFAMILY SSF51011 621 723 6.47E-26 T 11-10-2018 AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 PIRSF PIRSF000463 2 726 6.0E-272 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 SMART SM00642 245 608 2.8E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 SUPERFAMILY SSF81296 128 221 4.72E-24 T 11-10-2018 IPR014756 Immunoglobulin E-set AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 Gene3D G3DSA:2.60.40.1180 621 726 4.6E-30 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 SUPERFAMILY SSF51445 235 619 8.37E-112 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 93 725 41.895 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 Gene3D G3DSA:2.60.40.10 2 216 3.1E-46 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 110 721 1.4E-252 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 SUPERFAMILY SSF81296 13 95 9.97E-7 T 11-10-2018 IPR014756 Immunoglobulin E-set AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 Pfam PF00128 Alpha amylase, catalytic domain 273 344 4.4E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 128 200 1.6E-18 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 Gene3D G3DSA:3.20.20.80 219 620 3.4E-165 T 11-10-2018 AVL55_12100 ce545600a0db15a32a298a4ed3515177 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 626 723 7.3E-16 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AVL55_05415 104f26500c2664527b5083a69ec0c848 266 Gene3D G3DSA:1.10.800.10 1 266 4.5E-100 T 11-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 AVL55_05415 104f26500c2664527b5083a69ec0c848 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 139 158 2.9E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AVL55_05415 104f26500c2664527b5083a69ec0c848 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 211 230 2.9E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AVL55_05415 104f26500c2664527b5083a69ec0c848 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 75 97 2.9E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AVL55_05415 104f26500c2664527b5083a69ec0c848 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 179 197 2.9E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AVL55_05415 104f26500c2664527b5083a69ec0c848 266 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 256 2.7E-102 T 11-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AVL55_05415 104f26500c2664527b5083a69ec0c848 266 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 118 129 - T 11-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AVL55_05415 104f26500c2664527b5083a69ec0c848 266 SUPERFAMILY SSF56534 4 248 1.16E-97 T 11-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily AVL55_05415 104f26500c2664527b5083a69ec0c848 266 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 7 231 1.1E-49 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 SUPERFAMILY SSF52172 8 142 3.84E-18 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_07135 5083689b637f5c280b0895193e48dd40 540 Gene3D G3DSA:3.40.50.2300 4 138 9.3E-18 T 11-10-2018 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 Gene3D G3DSA:1.25.40.10 139 319 2.1E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 SMART SM00448 9 125 5.9E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 SUPERFAMILY SSF48452 168 484 9.96E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 SMART SM00028 448 481 3.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 SMART SM00028 390 423 420.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 SMART SM00028 235 268 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 SMART SM00028 168 201 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 Pfam PF00072 Response regulator receiver domain 12 125 5.9E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07135 5083689b637f5c280b0895193e48dd40 540 Gene3D G3DSA:1.25.40.10 328 534 1.2E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 SUPERFAMILY SSF48452 37 322 2.62E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 SMART SM00028 43 76 3.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 SMART SM00028 350 383 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 SMART SM00028 177 210 40.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 SMART SM00028 77 110 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 SMART SM00028 279 312 6.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 SMART SM00028 245 278 64.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 Pfam PF13432 Tetratricopeptide repeat 250 309 1.4E-7 T 11-10-2018 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 Pfam PF13432 Tetratricopeptide repeat 150 210 3.3E-4 T 11-10-2018 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 Pfam PF13469 Sulfotransferase family 418 604 1.4E-41 T 11-10-2018 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 Gene3D G3DSA:1.25.40.10 148 405 9.7E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 Gene3D G3DSA:3.40.50.300 406 652 2.8E-59 T 11-10-2018 AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 SUPERFAMILY SSF52540 400 639 1.37E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09035 a876064f48b485514ff20d31ff08a7b5 652 Gene3D G3DSA:1.25.40.10 4 140 1.0E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_11320 22032e0b1e93ccd9b0dd0496b4753c4e 237 Gene3D G3DSA:3.40.33.10 46 185 3.3E-14 T 11-10-2018 IPR035940 CAP superfamily AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 SUPERFAMILY SSF63411 539 742 3.5E-42 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 Gene3D G3DSA:3.30.830.10 63 286 6.2E-62 T 11-10-2018 AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 Gene3D G3DSA:3.30.830.10 293 486 1.5E-31 T 11-10-2018 AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 Pfam PF00675 Insulinase (Peptidase family M16) 77 169 3.3E-15 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 Pfam PF00675 Insulinase (Peptidase family M16) 562 676 1.1E-10 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 SUPERFAMILY SSF63411 301 482 1.32E-28 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 Gene3D G3DSA:3.30.830.10 544 750 1.6E-39 T 11-10-2018 AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 Gene3D G3DSA:3.30.830.10 759 956 7.4E-36 T 11-10-2018 AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 Pfam PF05193 Peptidase M16 inactive domain 706 876 2.9E-20 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 Pfam PF05193 Peptidase M16 inactive domain 235 411 1.8E-28 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 SUPERFAMILY SSF63411 765 969 1.1E-38 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_13055 5a99b7e1865627e4153effa86f246a0c 971 SUPERFAMILY SSF63411 65 279 2.79E-50 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_04725 6c8c6a82a1773fb98a9b1d89a063d5e1 450 Pfam PF02163 Peptidase family M50 10 436 1.1E-84 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AVL55_04725 6c8c6a82a1773fb98a9b1d89a063d5e1 450 Gene3D G3DSA:2.30.42.10 221 307 1.0E-19 T 11-10-2018 AVL55_04725 6c8c6a82a1773fb98a9b1d89a063d5e1 450 Gene3D G3DSA:2.30.42.10 126 219 3.4E-27 T 11-10-2018 AVL55_04725 6c8c6a82a1773fb98a9b1d89a063d5e1 450 SUPERFAMILY SSF50156 88 184 3.15E-14 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AVL55_04725 6c8c6a82a1773fb98a9b1d89a063d5e1 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 449 6.7E-136 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AVL55_04725 6c8c6a82a1773fb98a9b1d89a063d5e1 450 Pfam PF13180 PDZ domain 220 287 1.4E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_04725 6c8c6a82a1773fb98a9b1d89a063d5e1 450 SUPERFAMILY SSF50156 198 288 6.18E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AVL55_04725 6c8c6a82a1773fb98a9b1d89a063d5e1 450 SMART SM00228 115 186 6.6E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_04725 6c8c6a82a1773fb98a9b1d89a063d5e1 450 SMART SM00228 190 279 1.2E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_17190 c6584684fa5f7a3f59bbd862dc8e9bbb 301 Gene3D G3DSA:3.30.470.80 182 299 7.8E-43 T 11-10-2018 AVL55_17190 c6584684fa5f7a3f59bbd862dc8e9bbb 301 SUPERFAMILY SSF56059 98 288 2.57E-49 T 11-10-2018 AVL55_17190 c6584684fa5f7a3f59bbd862dc8e9bbb 301 Gene3D G3DSA:3.30.1490.20 115 181 3.0E-27 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_17190 c6584684fa5f7a3f59bbd862dc8e9bbb 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 6.0E-67 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AVL55_17190 c6584684fa5f7a3f59bbd862dc8e9bbb 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 51.972 T 11-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AVL55_17190 c6584684fa5f7a3f59bbd862dc8e9bbb 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 1.9E-83 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AVL55_17190 c6584684fa5f7a3f59bbd862dc8e9bbb 301 Gene3D G3DSA:3.40.50.20 1 114 1.0E-38 T 11-10-2018 AVL55_06305 501d2a1682e514a6dc8cd0b5ce061f2e 365 PIRSF PIRSF001456 3 362 3.5E-142 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AVL55_06305 501d2a1682e514a6dc8cd0b5ce061f2e 365 Pfam PF01264 Chorismate synthase 10 345 4.4E-141 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AVL55_06305 501d2a1682e514a6dc8cd0b5ce061f2e 365 SUPERFAMILY SSF103263 4 352 3.01E-147 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AVL55_06305 501d2a1682e514a6dc8cd0b5ce061f2e 365 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.466 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AVL55_06305 501d2a1682e514a6dc8cd0b5ce061f2e 365 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AVL55_06305 501d2a1682e514a6dc8cd0b5ce061f2e 365 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AVL55_06305 501d2a1682e514a6dc8cd0b5ce061f2e 365 Gene3D G3DSA:3.60.150.10 1 363 4.7E-156 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AVL55_06305 501d2a1682e514a6dc8cd0b5ce061f2e 365 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 3.0E-142 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 Pfam PF00122 E1-E2 ATPase 309 489 2.7E-56 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 ProSitePatterns PS01047 Heavy-metal-associated domain. 87 116 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 SUPERFAMILY SSF81653 312 408 2.09E-29 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 Gene3D G3DSA:2.70.150.20 301 413 8.4E-41 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 Gene3D G3DSA:3.30.70.100 9 79 2.6E-19 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 Gene3D G3DSA:3.30.70.100 80 154 2.5E-21 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 SUPERFAMILY SSF55008 81 150 3.14E-21 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 16 78 1.8E-11 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 83 143 8.1E-10 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 SUPERFAMILY SSF56784 508 816 5.67E-61 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 223 819 9.0E-178 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 512 518 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 744 3.1E-28 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 358 372 3.1E-28 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 524 3.1E-28 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 645 3.1E-28 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 709 728 3.1E-28 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 666 3.1E-28 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 Pfam PF00702 haloacid dehalogenase-like hydrolase 507 723 1.7E-43 T 11-10-2018 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 Gene3D G3DSA:3.40.1110.10 521 641 1.1E-90 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 241 818 9.6E-186 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 ProSitePatterns PS01047 Heavy-metal-associated domain. 20 49 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 681 697 1.4E-9 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 709 725 1.4E-9 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 740 765 1.4E-9 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 587 605 1.4E-9 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 Gene3D G3DSA:3.40.50.1000 491 761 1.1E-90 T 11-10-2018 IPR023214 HAD superfamily AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 SUPERFAMILY SSF81665 258 786 6.28E-13 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 SUPERFAMILY SSF55008 11 81 1.15E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 Pfam PF00403 Heavy-metal-associated domain 85 142 1.1E-15 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 Pfam PF00403 Heavy-metal-associated domain 18 77 1.4E-14 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AVL55_05865 486e7c76c4312c8f583744d3b63cbacf 831 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 280 787 6.5E-94 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_09185 1a3ebbf52983425f4312e9ecbe258e15 320 SUPERFAMILY SSF102114 50 313 4.71E-67 T 11-10-2018 AVL55_09185 1a3ebbf52983425f4312e9ecbe258e15 320 Gene3D G3DSA:3.20.20.70 45 287 5.0E-21 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_09185 1a3ebbf52983425f4312e9ecbe258e15 320 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 72 5.7E-9 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AVL55_09185 1a3ebbf52983425f4312e9ecbe258e15 320 TIGRFAM TIGR00510 lipA: lipoyl synthase 22 319 2.7E-143 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AVL55_09185 1a3ebbf52983425f4312e9ecbe258e15 320 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 154.184 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AVL55_09185 1a3ebbf52983425f4312e9ecbe258e15 320 Pfam PF04055 Radical SAM superfamily 90 250 5.9E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_09185 1a3ebbf52983425f4312e9ecbe258e15 320 SMART SM00729 83 291 1.6E-13 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AVL55_09185 1a3ebbf52983425f4312e9ecbe258e15 320 PIRSF PIRSF005963 1 320 2.4E-131 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 Gene3D G3DSA:3.20.20.450 553 806 8.4E-94 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 SMART SM00052 550 796 3.2E-102 T 11-10-2018 IPR001633 EAL domain AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 533 1.1E-47 T 11-10-2018 IPR000160 GGDEF domain AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 SMART SM00267 368 540 3.8E-58 T 11-10-2018 IPR000160 GGDEF domain AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 Pfam PF00563 EAL domain 556 791 1.6E-73 T 11-10-2018 IPR001633 EAL domain AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 Gene3D G3DSA:3.30.70.270 373 552 3.1E-57 T 11-10-2018 AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 Pfam PF14827 Double sensory domain of two-component sensor kinase 48 273 4.9E-15 T 11-10-2018 IPR029150 Double Cache domain 3 AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 538 3.7E-44 T 11-10-2018 IPR000160 GGDEF domain AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 SUPERFAMILY SSF141868 557 804 9.29E-87 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_00310 a25c730d6d10346b98dd461b8c53eace 814 SUPERFAMILY SSF55073 384 541 3.37E-46 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_13440 066cd1548b03fcf0b14e1d812a616586 394 Gene3D G3DSA:2.50.20.10 97 282 2.2E-50 T 11-10-2018 AVL55_13440 066cd1548b03fcf0b14e1d812a616586 394 Gene3D G3DSA:3.30.200.100 293 391 2.3E-23 T 11-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily AVL55_13440 066cd1548b03fcf0b14e1d812a616586 394 Pfam PF03888 MucB/RseB N-terminal domain 98 274 3.7E-52 T 11-10-2018 IPR033434 MucB/RseB, N-terminal AVL55_13440 066cd1548b03fcf0b14e1d812a616586 394 Pfam PF17188 MucB/RseB C-terminal domain 291 386 7.6E-23 T 11-10-2018 IPR033436 MucB/RseB, C-terminal AVL55_04700 4ccb6a3a754ec19d26b878cbff8064ea 245 SUPERFAMILY SSF53633 8 240 6.81E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_04700 4ccb6a3a754ec19d26b878cbff8064ea 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 3.9E-102 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AVL55_04700 4ccb6a3a754ec19d26b878cbff8064ea 245 Gene3D G3DSA:3.40.1160.10 4 244 1.8E-75 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_04700 4ccb6a3a754ec19d26b878cbff8064ea 245 Pfam PF00696 Amino acid kinase family 11 219 2.9E-27 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AVL55_04700 4ccb6a3a754ec19d26b878cbff8064ea 245 PIRSF PIRSF005650 4 245 2.7E-89 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AVL55_04700 4ccb6a3a754ec19d26b878cbff8064ea 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.86 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 1.8E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.8E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.8E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.8E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.8E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.8E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 SUPERFAMILY SSF51735 21 262 8.12E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 9.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 9.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 9.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 Gene3D G3DSA:3.40.50.720 2 263 2.9E-71 T 11-10-2018 AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 261 4.0E-55 T 11-10-2018 AVL55_03055 d172583a16b447b9482252dbaf86aa84 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 Pfam PF00271 Helicase conserved C-terminal domain 476 585 1.4E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 Pfam PF00270 DEAD/DEAH box helicase 270 428 2.0E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 SUPERFAMILY SSF52540 200 450 1.35E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 SUPERFAMILY SSF52540 449 651 1.05E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 661 8.4E-230 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 Gene3D G3DSA:2.40.50.140 45 138 6.9E-12 T 11-10-2018 AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 SMART SM00490 332 410 1.1 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 SMART SM00490 502 586 1.1E-20 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 Gene3D G3DSA:3.40.50.300 206 447 6.0E-83 T 11-10-2018 AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 Gene3D G3DSA:3.40.50.300 454 627 2.9E-51 T 11-10-2018 AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 Pfam PF17191 RecG wedge domain 9 169 2.8E-22 T 11-10-2018 IPR033454 RecG, wedge domain AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 SUPERFAMILY SSF50249 6 171 5.14E-41 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_00585 e69bc5cca00507dde95f32c9b873e4e7 690 SMART SM00487 262 456 4.9E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 Gene3D G3DSA:3.30.465.10 100 261 8.8E-71 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 SUPERFAMILY SSF56176 5 266 4.67E-66 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 Gene3D G3DSA:3.30.70.610 262 342 6.4E-17 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 Gene3D G3DSA:3.30.70.610 366 429 6.3E-14 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 Gene3D G3DSA:3.30.1370.20 430 514 4.1E-39 T 11-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 Pfam PF01565 FAD binding domain 41 177 4.4E-8 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 SUPERFAMILY SSF55103 269 560 5.89E-102 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 563 56.464 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 Gene3D G3DSA:3.30.43.10 2 95 1.1E-11 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 PIRSF PIRSF000101 1 565 4.7E-264 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_13215 aa3e0bfa37832710cf7476961c6129fd 575 Pfam PF09330 D-lactate dehydrogenase, membrane binding 271 561 2.0E-131 T 11-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 Gene3D G3DSA:3.10.50.30 77 158 3.8E-29 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 27.021 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 SUPERFAMILY SSF46557 3 78 7.19E-27 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 50.48 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 PIRSF PIRSF006092 1 157 3.1E-45 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.6E-25 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 2.6E-21 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 SUPERFAMILY SSF54534 80 155 5.36E-19 T 11-10-2018 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 Gene3D G3DSA:1.10.287.180 1 76 4.6E-31 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AVL55_19495 b9f3d30ae0ed3e6d237929c23def8c56 161 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 155 1.5E-75 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AVL55_06485 51f000d386ab48aa8da009f64afc95e9 555 SUPERFAMILY SSF52025 145 248 1.96E-6 T 11-10-2018 AVL55_06485 51f000d386ab48aa8da009f64afc95e9 555 Pfam PF02225 PA domain 147 238 2.4E-7 T 11-10-2018 IPR003137 PA domain AVL55_06485 51f000d386ab48aa8da009f64afc95e9 555 Pfam PF04389 Peptidase family M28 312 526 7.1E-46 T 11-10-2018 IPR007484 Peptidase M28 AVL55_06485 51f000d386ab48aa8da009f64afc95e9 555 SUPERFAMILY SSF53187 46 540 5.34E-67 T 11-10-2018 AVL55_06485 51f000d386ab48aa8da009f64afc95e9 555 Gene3D G3DSA:3.40.630.10 69 512 1.0E-53 T 11-10-2018 AVL55_06485 51f000d386ab48aa8da009f64afc95e9 555 Gene3D G3DSA:3.50.30.30 113 302 1.0E-53 T 11-10-2018 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.2E-53 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 Pfam PF00453 Ribosomal protein L20 3 109 6.5E-50 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 11-10-2018 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 Gene3D G3DSA:1.10.1900.20 56 118 7.7E-30 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 Gene3D G3DSA:1.10.720.90 2 55 9.0E-24 T 11-10-2018 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.084 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08105 ec5c4ad40b35955af5a63fb4c6cf5115 118 SUPERFAMILY SSF74731 3 117 1.18E-50 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01555 35355e69a06048577530bc49acd04786 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 AVL55_01555 35355e69a06048577530bc49acd04786 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.836 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AVL55_01555 35355e69a06048577530bc49acd04786 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 128 209 7.3E-5 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AVL55_01555 35355e69a06048577530bc49acd04786 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 126 2.9E-32 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AVL55_01555 35355e69a06048577530bc49acd04786 248 Gene3D G3DSA:3.40.50.1240 2 248 1.9E-92 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AVL55_01555 35355e69a06048577530bc49acd04786 248 PIRSF PIRSF000709 3 112 5.2E-7 T 11-10-2018 AVL55_01555 35355e69a06048577530bc49acd04786 248 PIRSF PIRSF000709 146 243 0.36 T 11-10-2018 AVL55_01555 35355e69a06048577530bc49acd04786 248 SMART SM00855 3 189 2.3E-28 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AVL55_01555 35355e69a06048577530bc49acd04786 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 1.2E-119 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AVL55_01555 35355e69a06048577530bc49acd04786 248 SUPERFAMILY SSF53254 1 245 5.27E-81 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AVL55_15410 d03aae663591d56f7a2acc827317eaf7 347 Pfam PF00437 Type II/IV secretion system protein 12 269 8.2E-51 T 11-10-2018 IPR001482 Type II/IV secretion system protein AVL55_15410 d03aae663591d56f7a2acc827317eaf7 347 Gene3D G3DSA:3.40.50.300 101 347 1.0E-105 T 11-10-2018 AVL55_15410 d03aae663591d56f7a2acc827317eaf7 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AVL55_15410 d03aae663591d56f7a2acc827317eaf7 347 SUPERFAMILY SSF52540 5 334 4.88E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15410 d03aae663591d56f7a2acc827317eaf7 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 4.4E-154 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AVL55_15410 d03aae663591d56f7a2acc827317eaf7 347 Gene3D G3DSA:3.30.450.90 1 100 4.9E-35 T 11-10-2018 AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 Gene3D G3DSA:3.10.580.10 135 262 7.8E-38 T 11-10-2018 AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 SUPERFAMILY SSF158791 11 136 7.32E-29 T 11-10-2018 AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 SMART SM00924 36 139 2.5E-34 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 Pfam PF01769 Divalent cation transporter 326 444 8.8E-23 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 SUPERFAMILY SSF54631 138 278 5.43E-31 T 11-10-2018 AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 Pfam PF03448 MgtE intracellular N domain 36 137 1.5E-23 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 SUPERFAMILY SSF161093 280 451 6.28E-45 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 17 451 2.2E-92 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 Gene3D G3DSA:1.10.357.20 277 452 3.5E-46 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 Pfam PF00571 CBS domain 203 257 5.0E-6 T 11-10-2018 IPR000644 CBS domain AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 Pfam PF00571 CBS domain 142 197 5.4E-5 T 11-10-2018 IPR000644 CBS domain AVL55_03525 64e5fb28934c10ce7dcbf5f29b8bb3d9 452 Gene3D G3DSA:1.25.60.10 8 134 6.7E-19 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily AVL55_19070 c16da043f731c8af231a4f5c3c1f0d6f 1028 SMART SM00965 56 107 4.4E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AVL55_19070 c16da043f731c8af231a4f5c3c1f0d6f 1028 Gene3D G3DSA:2.170.130.10 132 269 1.4E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_19070 c16da043f731c8af231a4f5c3c1f0d6f 1028 Pfam PF07715 TonB-dependent Receptor Plug Domain 163 265 2.6E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_19070 c16da043f731c8af231a4f5c3c1f0d6f 1028 SUPERFAMILY SSF56935 139 1028 3.66E-69 T 11-10-2018 AVL55_19070 c16da043f731c8af231a4f5c3c1f0d6f 1028 Gene3D G3DSA:3.55.50.30 32 116 1.8E-17 T 11-10-2018 AVL55_19070 c16da043f731c8af231a4f5c3c1f0d6f 1028 Gene3D G3DSA:2.40.170.20 538 1027 2.0E-31 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_19070 c16da043f731c8af231a4f5c3c1f0d6f 1028 Pfam PF00593 TonB dependent receptor 569 1026 1.6E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_19070 c16da043f731c8af231a4f5c3c1f0d6f 1028 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 145 1027 1.3E-180 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AVL55_14055 56793e7e1554fa909f0c93896dd6180f 632 Gene3D G3DSA:3.60.20.10 5 186 9.3E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_14055 56793e7e1554fa909f0c93896dd6180f 632 SUPERFAMILY SSF56235 1 223 8.23E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_14055 56793e7e1554fa909f0c93896dd6180f 632 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 557 6.8E-161 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AVL55_14055 56793e7e1554fa909f0c93896dd6180f 632 PIRSF PIRSF001589 1 632 1.8E-170 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AVL55_14055 56793e7e1554fa909f0c93896dd6180f 632 Pfam PF00733 Asparagine synthase 240 622 2.4E-95 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AVL55_14055 56793e7e1554fa909f0c93896dd6180f 632 SUPERFAMILY SSF52402 233 617 2.79E-77 T 11-10-2018 AVL55_14055 56793e7e1554fa909f0c93896dd6180f 632 Pfam PF13537 Glutamine amidotransferase domain 47 167 2.0E-51 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AVL55_16410 ded76220303e0b59daf8aee7b52b1d40 396 Pfam PF08495 FIST N domain 52 248 4.2E-29 T 11-10-2018 IPR013702 FIST domain, N-terminal AVL55_16410 ded76220303e0b59daf8aee7b52b1d40 396 Pfam PF10442 FIST C domain 250 380 3.0E-15 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AVL55_16410 ded76220303e0b59daf8aee7b52b1d40 396 SMART SM01204 250 381 1.2E-30 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AVL55_16410 ded76220303e0b59daf8aee7b52b1d40 396 SMART SM00897 48 249 7.3E-43 T 11-10-2018 IPR013702 FIST domain, N-terminal AVL55_12210 2c2c9406ab1035c2aedcf32e4fd58aa6 84 Gene3D G3DSA:3.40.50.2300 1 65 1.1E-13 T 11-10-2018 AVL55_12210 2c2c9406ab1035c2aedcf32e4fd58aa6 84 Pfam PF13377 Periplasmic binding protein-like domain 6 44 3.1E-12 T 11-10-2018 AVL55_12210 2c2c9406ab1035c2aedcf32e4fd58aa6 84 SUPERFAMILY SSF53822 2 43 1.79E-13 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_05240 a9dbf9ab37dbfff56dc45d69a8e3e241 163 Pfam PF01584 CheW-like domain 19 155 4.0E-42 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_05240 a9dbf9ab37dbfff56dc45d69a8e3e241 163 SMART SM00260 15 152 3.4E-51 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_05240 a9dbf9ab37dbfff56dc45d69a8e3e241 163 SUPERFAMILY SSF50341 12 158 5.49E-44 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AVL55_05240 a9dbf9ab37dbfff56dc45d69a8e3e241 163 Gene3D G3DSA:2.40.50.180 38 147 3.4E-43 T 11-10-2018 AVL55_05240 a9dbf9ab37dbfff56dc45d69a8e3e241 163 Gene3D G3DSA:2.30.30.40 21 146 3.4E-43 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 SUPERFAMILY SSF82693 137 329 1.13E-24 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 SUPERFAMILY SSF82714 720 807 6.02E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 Gene3D G3DSA:3.30.2090.10 719 807 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 SUPERFAMILY SSF82866 295 496 1.7E-47 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 Gene3D G3DSA:3.30.70.1320 132 331 0.0 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 Gene3D G3DSA:1.20.1640.10 8 511 0.0 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 SUPERFAMILY SSF82693 38 132 3.31E-26 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 Pfam PF00873 AcrB/AcrD/AcrF family 1 1023 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 SUPERFAMILY SSF82866 829 1024 5.1E-46 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 SUPERFAMILY SSF82714 182 271 2.35E-24 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 2.4E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 2.4E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 2.4E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.4E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.4E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 2.4E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 2.4E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 2.4E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.4E-105 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 Gene3D G3DSA:3.30.2090.10 178 274 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 Gene3D G3DSA:1.20.1640.10 512 1020 0.0 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 SUPERFAMILY SSF82693 670 854 6.02E-29 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 Gene3D G3DSA:3.30.70.1430 38 815 0.0 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1030 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 SUPERFAMILY SSF82693 564 667 6.28E-28 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 Gene3D G3DSA:3.30.70.1430 566 666 0.0 T 11-10-2018 AVL55_00715 eaa4dd8a025a2bb4946f6d575ae7d113 1032 Gene3D G3DSA:3.30.70.1440 667 863 0.0 T 11-10-2018 AVL55_15460 2d8a2e13082fe6a075061f1eed3d7985 144 SUPERFAMILY SSF82784 7 142 4.19E-35 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AVL55_15460 2d8a2e13082fe6a075061f1eed3d7985 144 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 1.1E-57 T 11-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AVL55_15460 2d8a2e13082fe6a075061f1eed3d7985 144 Gene3D G3DSA:3.30.300.20 1 142 5.0E-41 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AVL55_15460 2d8a2e13082fe6a075061f1eed3d7985 144 Pfam PF02566 OsmC-like protein 42 139 1.4E-20 T 11-10-2018 IPR003718 OsmC/Ohr family AVL55_06970 ff26c9b8fbd295522a64e29e261be573 382 Gene3D G3DSA:1.10.287.470 103 177 1.6E-43 T 11-10-2018 AVL55_06970 ff26c9b8fbd295522a64e29e261be573 382 Pfam PF13533 Biotin-lipoyl like 66 117 2.1E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AVL55_06970 ff26c9b8fbd295522a64e29e261be573 382 Gene3D G3DSA:2.40.420.20 304 367 1.6E-43 T 11-10-2018 AVL55_06970 ff26c9b8fbd295522a64e29e261be573 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 369 1.2E-38 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_06970 ff26c9b8fbd295522a64e29e261be573 382 Gene3D G3DSA:2.40.30.170 54 303 1.6E-43 T 11-10-2018 AVL55_06970 ff26c9b8fbd295522a64e29e261be573 382 SUPERFAMILY SSF111369 57 277 2.22E-22 T 11-10-2018 AVL55_06970 ff26c9b8fbd295522a64e29e261be573 382 Pfam PF13437 HlyD family secretion protein 180 283 2.3E-11 T 11-10-2018 AVL55_06970 ff26c9b8fbd295522a64e29e261be573 382 Gene3D G3DSA:2.40.50.100 66 211 1.6E-43 T 11-10-2018 AVL55_06945 10ead3610e26fa9011c6054728f07990 360 Gene3D G3DSA:2.40.30.170 47 273 3.6E-59 T 11-10-2018 AVL55_06945 10ead3610e26fa9011c6054728f07990 360 Gene3D G3DSA:2.40.420.20 40 353 3.6E-59 T 11-10-2018 AVL55_06945 10ead3610e26fa9011c6054728f07990 360 Pfam PF13437 HlyD family secretion protein 160 263 8.2E-8 T 11-10-2018 AVL55_06945 10ead3610e26fa9011c6054728f07990 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 354 1.5E-54 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_06945 10ead3610e26fa9011c6054728f07990 360 Gene3D G3DSA:2.40.50.100 62 194 3.6E-59 T 11-10-2018 AVL55_06945 10ead3610e26fa9011c6054728f07990 360 Gene3D G3DSA:1.10.287.470 96 155 3.6E-59 T 11-10-2018 AVL55_06945 10ead3610e26fa9011c6054728f07990 360 SUPERFAMILY SSF111369 53 229 2.88E-28 T 11-10-2018 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 11-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 11-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 567 3.0E-293 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 Gene3D G3DSA:3.20.20.140 129 567 7.2E-298 T 11-10-2018 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 3.5E-54 T 11-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 SUPERFAMILY SSF51338 422 477 7.77E-7 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 Gene3D G3DSA:2.30.40.10 4 480 7.2E-298 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 SUPERFAMILY SSF51556 129 567 1.29E-200 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 SUPERFAMILY SSF51338 2 176 1.9E-61 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 5.3E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 5.3E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 5.3E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 5.3E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 Pfam PF01979 Amidohydrolase family 125 454 8.6E-82 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AVL55_14910 0ce8d3fb968e9a803141835d1cb91d97 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.928 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AVL55_19605 0b40a7d687ad737efb6d142cfd3ffd2d 195 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 171 5.5E-49 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19605 0b40a7d687ad737efb6d142cfd3ffd2d 195 SUPERFAMILY SSF110111 52 174 1.7E-42 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19605 0b40a7d687ad737efb6d142cfd3ffd2d 195 PIRSF PIRSF005413 1 186 2.2E-64 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19605 0b40a7d687ad737efb6d142cfd3ffd2d 195 Gene3D G3DSA:2.60.370.10 52 184 6.1E-42 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_08895 fd3b689adba9e4b76b50c328d5253453 223 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 119 210 2.3E-19 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AVL55_08895 fd3b689adba9e4b76b50c328d5253453 223 Gene3D G3DSA:2.60.120.620 18 214 3.6E-46 T 11-10-2018 AVL55_08895 fd3b689adba9e4b76b50c328d5253453 223 SMART SM00702 34 210 6.5E-16 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AVL55_03570 f3d4e2a22a7a0209db62534386f4cb11 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 20 171 2.2E-47 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AVL55_03570 f3d4e2a22a7a0209db62534386f4cb11 182 SUPERFAMILY SSF56784 16 175 3.6E-39 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_03570 f3d4e2a22a7a0209db62534386f4cb11 182 Gene3D G3DSA:3.40.50.1000 1 182 4.2E-53 T 11-10-2018 IPR023214 HAD superfamily AVL55_03570 f3d4e2a22a7a0209db62534386f4cb11 182 PIRSF PIRSF006118 7 181 7.0E-63 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AVL55_03570 f3d4e2a22a7a0209db62534386f4cb11 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 87 152 7.6E-11 T 11-10-2018 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.3E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.3E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.3E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 PIRSF PIRSF002144 1 91 1.8E-31 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 Pfam PF00203 Ribosomal protein S19 3 83 6.9E-36 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 SUPERFAMILY SSF54570 3 83 9.94E-35 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.461 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 Gene3D G3DSA:3.30.860.10 1 91 9.1E-42 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01610 d2351d151089aa42144cc3ecb7ebdb0e 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 3.0E-45 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AVL55_17950 cf9225bd69bcf8f85c901186c99b664e 192 Gene3D G3DSA:1.20.1590.10 2 192 5.4E-66 T 11-10-2018 IPR023381 YP001051499.1-like domain superfamily AVL55_17950 cf9225bd69bcf8f85c901186c99b664e 192 Pfam PF04222 Protein of unknown function (DUF416) 8 191 5.7E-61 T 11-10-2018 IPR007338 Protein of unknown function DUF416 AVL55_08865 499e1864307ff7955cf1ef4dbacfbeec 133 SUPERFAMILY SSF89919 3 115 3.14E-29 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AVL55_08865 499e1864307ff7955cf1ef4dbacfbeec 133 Pfam PF02033 Ribosome-binding factor A 7 112 1.7E-28 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AVL55_08865 499e1864307ff7955cf1ef4dbacfbeec 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 113 24.642 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AVL55_08865 499e1864307ff7955cf1ef4dbacfbeec 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AVL55_08865 499e1864307ff7955cf1ef4dbacfbeec 133 Gene3D G3DSA:3.30.300.20 1 108 2.3E-32 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AVL55_08865 499e1864307ff7955cf1ef4dbacfbeec 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 4.5E-32 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AVL55_08865 499e1864307ff7955cf1ef4dbacfbeec 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 3.0E-21 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AVL55_17985 70093d529e0782d132944641882f49dd 439 SUPERFAMILY SSF81891 169 403 3.4E-48 T 11-10-2018 AVL55_17985 70093d529e0782d132944641882f49dd 439 Gene3D G3DSA:1.10.3090.10 167 415 3.1E-93 T 11-10-2018 AVL55_17985 70093d529e0782d132944641882f49dd 439 SUPERFAMILY SSF81301 6 165 3.81E-37 T 11-10-2018 AVL55_17985 70093d529e0782d132944641882f49dd 439 Pfam PF01743 Poly A polymerase head domain 32 167 3.2E-35 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AVL55_17985 70093d529e0782d132944641882f49dd 439 Pfam PF12626 Polymerase A arginine-rich C-terminus 312 431 8.0E-39 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AVL55_17985 70093d529e0782d132944641882f49dd 439 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 1 433 36.137 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AVL55_17985 70093d529e0782d132944641882f49dd 439 Gene3D G3DSA:3.30.460.10 1 164 8.3E-58 T 11-10-2018 AVL55_17985 70093d529e0782d132944641882f49dd 439 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 2 433 8.9E-159 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AVL55_17985 70093d529e0782d132944641882f49dd 439 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 195 257 1.3E-21 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 SUPERFAMILY SSF89550 4 247 1.45E-12 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 275 715 7.6E-181 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 Pfam PF14579 Helix-hairpin-helix motif 788 877 2.4E-26 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 SMART SM00481 1 58 6.3E-11 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 Gene3D G3DSA:3.20.20.140 1 254 6.4E-82 T 11-10-2018 AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 Gene3D G3DSA:1.10.10.1600 417 494 2.8E-34 T 11-10-2018 AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 1 1010 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 Gene3D G3DSA:1.10.150.870 759 866 4.4E-5 T 11-10-2018 AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 Pfam PF02811 PHP domain 1 155 5.9E-38 T 11-10-2018 IPR004013 PHP domain GO:0003824 AVL55_04760 340e9f0f978f3b7f9148ced02ac920c4 1139 Gene3D G3DSA:2.40.50.140 967 1053 3.6E-6 T 11-10-2018 AVL55_18250 11ec2c09a25857d2c5da725713520a82 172 SUPERFAMILY SSF160369 6 171 8.24E-47 T 11-10-2018 AVL55_18250 11ec2c09a25857d2c5da725713520a82 172 Pfam PF00466 Ribosomal protein L10 6 99 3.0E-23 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AVL55_18250 11ec2c09a25857d2c5da725713520a82 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 24.423 T 11-10-2018 IPR022973 Ribosomal protein L10 AVL55_18250 11ec2c09a25857d2c5da725713520a82 172 Gene3D G3DSA:3.30.70.1730 6 134 7.4E-28 T 11-10-2018 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 Pfam PF00890 FAD binding domain 9 405 2.3E-119 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 SUPERFAMILY SSF51905 4 436 4.76E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 Gene3D G3DSA:1.20.58.100 431 549 1.3E-37 T 11-10-2018 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 SUPERFAMILY SSF46977 454 590 2.22E-44 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 Gene3D G3DSA:3.90.700.10 246 350 5.8E-171 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 PIRSF PIRSF000171 1 582 2.9E-49 T 11-10-2018 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 590 2.9E-239 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 Gene3D G3DSA:4.10.80.40 550 590 2.7E-22 T 11-10-2018 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 590 2.8E-34 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 SUPERFAMILY SSF56425 236 356 1.79E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 Gene3D G3DSA:3.50.50.60 9 416 5.8E-171 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09590 a54056bed96039f8d1c86d8c04034816 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 590 4.4E-274 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 200 216 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 173 2.0E-22 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 Gene3D G3DSA:1.10.1670.10 15 219 2.5E-86 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 274 4.9E-114 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 SUPERFAMILY SSF48150 8 233 6.6E-77 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 Pfam PF14815 NUDIX domain 242 352 2.3E-20 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 SMART SM00478 43 198 4.0E-48 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 SUPERFAMILY SSF55811 228 354 3.69E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 Gene3D G3DSA:3.90.79.10 232 355 1.3E-14 T 11-10-2018 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 200 216 3.0E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 Pfam PF00633 Helix-hairpin-helix motif 103 131 2.1E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 Gene3D G3DSA:1.10.340.30 25 136 2.5E-86 T 11-10-2018 AVL55_01160 1a18c12d69f586c607415f068c1575fd 355 SMART SM00525 199 219 2.5E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 Gene3D G3DSA:3.40.50.20 3 96 3.0E-28 T 11-10-2018 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 Gene3D G3DSA:3.30.1490.20 123 192 4.6E-74 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 Gene3D G3DSA:3.30.470.20 97 309 4.6E-74 T 11-10-2018 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 16 313 6.2E-101 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 257 285 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 PIRSF PIRSF039102 54 322 5.3E-83 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 PIRSF PIRSF039102 12 57 8.0E-8 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 SUPERFAMILY SSF56059 108 312 2.65E-52 T 11-10-2018 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 Pfam PF07478 D-ala D-ala ligase C-terminus 115 311 7.6E-61 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 Pfam PF01820 D-ala D-ala ligase N-terminus 16 98 1.2E-15 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 15 315 33.641 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 SUPERFAMILY SSF52440 16 108 1.06E-26 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AVL55_15225 5bf7f007846dc9190cfbbe0932415f2f 322 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 75 86 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_10990 41b630d915fa703a3dd65078048c9e84 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 5.6E-61 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_10990 41b630d915fa703a3dd65078048c9e84 232 SMART SM00934 5 226 1.3E-96 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_10990 41b630d915fa703a3dd65078048c9e84 232 SUPERFAMILY SSF51366 2 230 4.71E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AVL55_10990 41b630d915fa703a3dd65078048c9e84 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_10990 41b630d915fa703a3dd65078048c9e84 232 Gene3D G3DSA:3.20.20.70 1 230 8.3E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_10990 41b630d915fa703a3dd65078048c9e84 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 2.0E-54 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_10990 41b630d915fa703a3dd65078048c9e84 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 39.185 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_00345 78ba30e00f0bc7a46c0c0abbeaf2dacc 285 Gene3D G3DSA:1.10.357.140 20 164 5.1E-42 T 11-10-2018 AVL55_00345 78ba30e00f0bc7a46c0c0abbeaf2dacc 285 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 5 282 2.7E-101 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AVL55_00345 78ba30e00f0bc7a46c0c0abbeaf2dacc 285 Gene3D G3DSA:1.20.120.1780 165 285 3.1E-13 T 11-10-2018 AVL55_00345 78ba30e00f0bc7a46c0c0abbeaf2dacc 285 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 283 28.75 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AVL55_00345 78ba30e00f0bc7a46c0c0abbeaf2dacc 285 Pfam PF01040 UbiA prenyltransferase family 23 264 1.1E-64 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AVL55_10575 9d5cf869f3a46f9e4e5fad2e1c15a355 218 SUPERFAMILY SSF55729 16 189 1.12E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_10575 9d5cf869f3a46f9e4e5fad2e1c15a355 218 Gene3D G3DSA:3.40.630.30 19 193 6.0E-28 T 11-10-2018 AVL55_10575 9d5cf869f3a46f9e4e5fad2e1c15a355 218 Pfam PF13444 Acetyltransferase (GNAT) domain 33 125 2.7E-11 T 11-10-2018 AVL55_03175 66569dc6388d13f5baea28012c69c11b 187 Pfam PF01381 Helix-turn-helix 20 71 1.3E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_03175 66569dc6388d13f5baea28012c69c11b 187 Gene3D G3DSA:2.60.120.10 95 187 6.0E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_03175 66569dc6388d13f5baea28012c69c11b 187 SUPERFAMILY SSF47413 13 79 2.41E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_03175 66569dc6388d13f5baea28012c69c11b 187 SMART SM00530 18 73 1.8E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_03175 66569dc6388d13f5baea28012c69c11b 187 SUPERFAMILY SSF51182 58 186 1.26E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_03175 66569dc6388d13f5baea28012c69c11b 187 Gene3D G3DSA:1.10.260.40 6 89 1.8E-19 T 11-10-2018 AVL55_19060 21a9bd90a660dfadff3ed1520b7833e2 775 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 150 1.5E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_19060 21a9bd90a660dfadff3ed1520b7833e2 775 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 32 775 1.3E-104 T 11-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AVL55_19060 21a9bd90a660dfadff3ed1520b7833e2 775 SUPERFAMILY SSF56935 39 775 3.87E-85 T 11-10-2018 AVL55_19060 21a9bd90a660dfadff3ed1520b7833e2 775 Pfam PF00593 TonB dependent receptor 260 774 2.3E-46 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_19060 21a9bd90a660dfadff3ed1520b7833e2 775 Gene3D G3DSA:2.40.170.20 170 775 2.0E-100 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_19060 21a9bd90a660dfadff3ed1520b7833e2 775 Gene3D G3DSA:2.170.130.10 38 165 2.0E-23 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 SUPERFAMILY SSF47323 669 866 3.74E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 578 1.2E-8 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 625 661 4.6E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 172 2.0E-27 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Gene3D G3DSA:1.10.730.10 9 798 0.0 T 11-10-2018 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Gene3D G3DSA:3.90.740.10 228 420 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 SUPERFAMILY SSF50677 227 421 1.47E-51 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 SUPERFAMILY SSF52374 5 675 1.49E-146 T 11-10-2018 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Gene3D G3DSA:3.10.330.110 573 635 0.0 T 11-10-2018 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Gene3D G3DSA:3.10.20.590 806 866 5.1E-24 T 11-10-2018 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Gene3D G3DSA:3.40.50.620 34 572 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 1.3E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 563 573 1.3E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 1.3E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 491 509 1.3E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 1.3E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 530 552 1.3E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 1.3E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 866 23.798 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Pfam PF08264 Anticodon-binding domain of tRNA 707 829 4.1E-19 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 866 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AVL55_09245 8fb7e029d4a23506c57aea832c8e0586 867 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 223 410 3.3E-76 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AVL55_15000 eefa8de80e0e17616aff6d79b45eb33c 429 Gene3D G3DSA:3.90.230.10 190 420 1.1E-61 T 11-10-2018 AVL55_15000 eefa8de80e0e17616aff6d79b45eb33c 429 SUPERFAMILY SSF55920 190 417 5.23E-58 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AVL55_15000 eefa8de80e0e17616aff6d79b45eb33c 429 Gene3D G3DSA:3.40.350.10 25 189 6.1E-45 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AVL55_15000 eefa8de80e0e17616aff6d79b45eb33c 429 Pfam PF01321 Creatinase/Prolidase N-terminal domain 57 190 3.6E-19 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AVL55_15000 eefa8de80e0e17616aff6d79b45eb33c 429 Pfam PF00557 Metallopeptidase family M24 199 404 1.8E-46 T 11-10-2018 IPR000994 Peptidase M24 AVL55_15000 eefa8de80e0e17616aff6d79b45eb33c 429 SUPERFAMILY SSF53092 41 189 2.09E-26 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 Pfam PF00183 Hsp90 protein 223 637 8.1E-134 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 SUPERFAMILY SSF54211 242 497 8.34E-101 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 Gene3D G3DSA:1.20.120.790 504 637 5.1E-43 T 11-10-2018 IPR037196 HSP90, C-terminal domain AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 Gene3D G3DSA:3.40.50.11260 409 498 1.3E-34 T 11-10-2018 AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 186 9.1E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 Gene3D G3DSA:3.30.230.80 241 408 6.7E-72 T 11-10-2018 AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 PIRSF PIRSF002583 2 640 1.3E-223 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 636 32.812 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 Gene3D G3DSA:3.30.565.10 4 218 5.0E-79 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 SUPERFAMILY SSF110942 524 636 3.27E-34 T 11-10-2018 IPR037196 HSP90, C-terminal domain AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 PRINTS PR00775 90kDa heat shock protein signature 175 192 3.0E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.0E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.0E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.0E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.0E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 PRINTS PR00775 90kDa heat shock protein signature 193 211 3.0E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.0E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 SUPERFAMILY SSF55874 8 218 1.96E-69 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_13085 a93e6bfc81a09984f7d3f084c339e178 640 SMART SM00387 30 187 4.8E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_02070 390dd7c4ae7b7b33cc110ef7a6609969 86 PRINTS PR00160 Glutaredoxin signature 61 74 3.0E-15 T 11-10-2018 IPR014025 Glutaredoxin subgroup AVL55_02070 390dd7c4ae7b7b33cc110ef7a6609969 86 PRINTS PR00160 Glutaredoxin signature 4 22 3.0E-15 T 11-10-2018 IPR014025 Glutaredoxin subgroup AVL55_02070 390dd7c4ae7b7b33cc110ef7a6609969 86 PRINTS PR00160 Glutaredoxin signature 47 60 3.0E-15 T 11-10-2018 IPR014025 Glutaredoxin subgroup AVL55_02070 390dd7c4ae7b7b33cc110ef7a6609969 86 SUPERFAMILY SSF52833 1 84 5.32E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_02070 390dd7c4ae7b7b33cc110ef7a6609969 86 Gene3D G3DSA:3.40.30.10 1 84 4.2E-27 T 11-10-2018 AVL55_02070 390dd7c4ae7b7b33cc110ef7a6609969 86 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AVL55_02070 390dd7c4ae7b7b33cc110ef7a6609969 86 Pfam PF00462 Glutaredoxin 4 64 3.5E-21 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AVL55_02070 390dd7c4ae7b7b33cc110ef7a6609969 86 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 4.1E-35 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 Gene3D G3DSA:1.20.140.10 242 389 6.1E-47 T 11-10-2018 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 SUPERFAMILY SSF47203 234 387 2.26E-47 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 2.6E-43 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 8.2E-36 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 Gene3D G3DSA:1.10.540.10 2 127 8.0E-46 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 Gene3D G3DSA:2.40.110.10 128 241 9.6E-47 T 11-10-2018 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 PIRSF PIRSF016578 135 389 2.9E-10 T 11-10-2018 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 PIRSF PIRSF016578 15 100 0.044 T 11-10-2018 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 SUPERFAMILY SSF56645 6 249 2.75E-86 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_08415 6b205b26d755d80f799288f863a08efc 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 3.1E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AVL55_13695 819c382bd27ceefc8089d8a4056ed0d2 239 Pfam PF01980 Uncharacterised protein family UPF0066 24 145 6.4E-36 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AVL55_13695 819c382bd27ceefc8089d8a4056ed0d2 239 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 5 150 6.4E-41 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AVL55_13695 819c382bd27ceefc8089d8a4056ed0d2 239 Gene3D G3DSA:3.30.2310.10 150 234 1.9E-16 T 11-10-2018 AVL55_13695 819c382bd27ceefc8089d8a4056ed0d2 239 Gene3D G3DSA:2.40.30.70 23 149 6.1E-43 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily AVL55_13695 819c382bd27ceefc8089d8a4056ed0d2 239 SUPERFAMILY SSF118196 6 233 7.59E-69 T 11-10-2018 IPR036413 YaeB-like superfamily AVL55_06510 92c35632c879693341fb60602809fb38 263 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AVL55_06510 92c35632c879693341fb60602809fb38 263 Gene3D G3DSA:3.30.540.10 4 154 5.9E-48 T 11-10-2018 AVL55_06510 92c35632c879693341fb60602809fb38 263 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 9 262 1.3E-87 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AVL55_06510 92c35632c879693341fb60602809fb38 263 Gene3D G3DSA:3.40.190.80 155 263 3.0E-33 T 11-10-2018 AVL55_06510 92c35632c879693341fb60602809fb38 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 9.3E-7 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_06510 92c35632c879693341fb60602809fb38 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 9.3E-7 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_06510 92c35632c879693341fb60602809fb38 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 9.3E-7 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_06510 92c35632c879693341fb60602809fb38 263 Pfam PF00459 Inositol monophosphatase family 14 245 6.5E-48 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_06510 92c35632c879693341fb60602809fb38 263 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 8 263 39.364 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AVL55_06510 92c35632c879693341fb60602809fb38 263 SUPERFAMILY SSF56655 5 250 1.13E-67 T 11-10-2018 AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 Gene3D G3DSA:3.40.50.300 2 266 1.7E-62 T 11-10-2018 AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 Gene3D G3DSA:3.40.50.300 267 467 1.0E-46 T 11-10-2018 AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 SUPERFAMILY SSF52540 4 244 5.33E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 SMART SM00382 29 222 1.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 SMART SM00382 290 464 2.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 Pfam PF00005 ABC transporter 282 416 7.4E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 ProSitePatterns PS00211 ABC transporters family signature. 388 402 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 Pfam PF00005 ABC transporter 21 174 2.4E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_14655 a2b0912f65412126d15f69863be3b7e0 471 SUPERFAMILY SSF52540 259 462 3.83E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05815 418e3f364916ea90a94df8b023193440 108 SMART SM00671 52 87 2.2E-8 T 11-10-2018 IPR006597 Sel1-like repeat AVL55_05815 418e3f364916ea90a94df8b023193440 108 Pfam PF08238 Sel1 repeat 56 87 2.6E-6 T 11-10-2018 IPR006597 Sel1-like repeat AVL55_05815 418e3f364916ea90a94df8b023193440 108 Pfam PF08238 Sel1 repeat 24 51 0.019 T 11-10-2018 IPR006597 Sel1-like repeat AVL55_05815 418e3f364916ea90a94df8b023193440 108 SUPERFAMILY SSF81901 27 94 1.57E-15 T 11-10-2018 AVL55_05815 418e3f364916ea90a94df8b023193440 108 Gene3D G3DSA:1.25.40.10 22 106 1.4E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13900 2ff3f64b32987abbf32ac6a3f7890f82 341 Gene3D G3DSA:1.10.287.70 5 98 6.7E-15 T 11-10-2018 AVL55_13900 2ff3f64b32987abbf32ac6a3f7890f82 341 SUPERFAMILY SSF81324 12 124 4.45E-19 T 11-10-2018 AVL55_13900 2ff3f64b32987abbf32ac6a3f7890f82 341 Pfam PF07885 Ion channel 20 92 3.9E-12 T 11-10-2018 IPR013099 Potassium channel domain AVL55_13900 2ff3f64b32987abbf32ac6a3f7890f82 341 Gene3D G3DSA:3.40.50.720 101 225 5.5E-10 T 11-10-2018 AVL55_13900 2ff3f64b32987abbf32ac6a3f7890f82 341 SUPERFAMILY SSF51735 111 234 1.38E-7 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_19180 eabb56df27267bcc803f1349ee79abcb 154 Pfam PF00364 Biotin-requiring enzyme 80 153 3.2E-24 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_19180 eabb56df27267bcc803f1349ee79abcb 154 SUPERFAMILY SSF51230 78 154 3.93E-25 T 11-10-2018 IPR011053 Single hybrid motif AVL55_19180 eabb56df27267bcc803f1349ee79abcb 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.7E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AVL55_19180 eabb56df27267bcc803f1349ee79abcb 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.7E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AVL55_19180 eabb56df27267bcc803f1349ee79abcb 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.7E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AVL55_19180 eabb56df27267bcc803f1349ee79abcb 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_19180 eabb56df27267bcc803f1349ee79abcb 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 3.5E-58 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AVL55_19180 eabb56df27267bcc803f1349ee79abcb 154 Gene3D G3DSA:2.40.50.100 76 154 3.7E-30 T 11-10-2018 AVL55_09530 4ebd914e0da9880741f4a340bf3b21f7 156 Pfam PF11143 Protein of unknown function (DUF2919) 6 150 2.9E-31 T 11-10-2018 IPR021318 Protein of unknown function DUF2919 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 SUPERFAMILY SSF81593 846 973 1.33E-25 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Gene3D G3DSA:1.20.120.330 306 461 5.3E-50 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Gene3D G3DSA:1.10.4050.10 12 131 6.8E-7 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 SUPERFAMILY SSF81301 551 841 2.52E-80 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 38 974 17.932 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 SUPERFAMILY SSF81593 308 457 2.59E-38 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Gene3D G3DSA:3.30.460.10 135 305 8.3E-62 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Gene3D G3DSA:1.20.120.1510 472 586 2.4E-26 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Gene3D G3DSA:3.30.460.100 587 840 4.2E-82 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Gene3D G3DSA:1.20.120.330 841 974 1.1E-35 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Pfam PF08335 GlnD PII-uridylyltransferase 856 951 6.1E-10 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Pfam PF08335 GlnD PII-uridylyltransferase 318 456 8.3E-41 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 SUPERFAMILY SSF81301 40 307 2.62E-73 T 11-10-2018 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 42 295 4.4E-78 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AVL55_14175 709f5d4da6cbd916e1af33cb704a3739 977 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 577 832 5.8E-81 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 372 2.1E-146 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 191 205 1.1E-40 T 11-10-2018 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 261 277 1.1E-40 T 11-10-2018 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 303 314 1.1E-40 T 11-10-2018 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 295 1.1E-40 T 11-10-2018 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 230 244 1.1E-40 T 11-10-2018 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 Pfam PF00117 Glutamine amidotransferase class-I 194 369 4.2E-49 T 11-10-2018 IPR017926 Glutamine amidotransferase AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 SUPERFAMILY SSF52021 4 139 2.48E-56 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 SUPERFAMILY SSF52317 154 375 3.01E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 7.9E-53 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 SMART SM01097 3 133 2.0E-90 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 233 242 9.7E-11 T 11-10-2018 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 272 9.7E-11 T 11-10-2018 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 346 359 9.7E-11 T 11-10-2018 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 Gene3D G3DSA:3.40.50.880 152 375 1.8E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 375 48.551 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07450 f5fda5fbf085ec7f7c09ade2b48c513a 376 Gene3D G3DSA:3.50.30.20 2 151 6.7E-60 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_14395 89e6cfd7c45eaa15ff08be124581872f 59 Pfam PF01527 Transposase 2 50 9.3E-6 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AVL55_14395 89e6cfd7c45eaa15ff08be124581872f 59 SUPERFAMILY SSF48295 2 50 2.14E-8 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AVL55_13970 94324c79012af68920e780aefacdb8f1 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_13970 94324c79012af68920e780aefacdb8f1 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_13970 94324c79012af68920e780aefacdb8f1 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_13970 94324c79012af68920e780aefacdb8f1 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 9.8E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_13970 94324c79012af68920e780aefacdb8f1 314 Gene3D G3DSA:3.40.190.10 90 304 3.3E-58 T 11-10-2018 AVL55_13970 94324c79012af68920e780aefacdb8f1 314 Gene3D G3DSA:3.40.190.10 170 279 3.3E-58 T 11-10-2018 AVL55_13970 94324c79012af68920e780aefacdb8f1 314 Gene3D G3DSA:1.10.10.10 1 87 2.4E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_13970 94324c79012af68920e780aefacdb8f1 314 SUPERFAMILY SSF46785 2 83 7.35E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_13970 94324c79012af68920e780aefacdb8f1 314 Pfam PF03466 LysR substrate binding domain 97 304 3.0E-15 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_13970 94324c79012af68920e780aefacdb8f1 314 SUPERFAMILY SSF53850 90 307 8.32E-37 T 11-10-2018 AVL55_06785 3307ee6c2fba183198dc8092d4530970 161 SUPERFAMILY SSF55781 23 154 1.53E-20 T 11-10-2018 AVL55_06785 3307ee6c2fba183198dc8092d4530970 161 Gene3D G3DSA:3.30.450.40 8 157 5.6E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_06785 3307ee6c2fba183198dc8092d4530970 161 Pfam PF01590 GAF domain 24 151 7.6E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_15565 a27abc2429ce413f07e2a3f9e1fe71f7 227 SUPERFAMILY SSF52218 17 213 2.21E-62 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_15565 a27abc2429ce413f07e2a3f9e1fe71f7 227 Gene3D G3DSA:3.40.50.360 4 227 9.3E-76 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_15565 a27abc2429ce413f07e2a3f9e1fe71f7 227 Pfam PF03358 NADPH-dependent FMN reductase 21 164 5.5E-29 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AVL55_15565 a27abc2429ce413f07e2a3f9e1fe71f7 227 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 13 213 1.0E-117 T 11-10-2018 IPR014063 Arsenate resistance ArsH AVL55_10265 75ab761b3f2b014183d7ae7451206d5b 430 SUPERFAMILY SSF46785 144 241 2.04E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_10265 75ab761b3f2b014183d7ae7451206d5b 430 Pfam PF01051 Initiator Replication protein 63 236 3.2E-19 T 11-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 AVL55_10265 75ab761b3f2b014183d7ae7451206d5b 430 Gene3D G3DSA:1.10.10.10 156 244 7.0E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_12940 f315f3424f10221e1e8fc43154b03b9a 306 Gene3D G3DSA:1.20.1510.10 10 215 1.0E-24 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_12940 f315f3424f10221e1e8fc43154b03b9a 306 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 274 1.8E-24 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AVL55_12940 f315f3424f10221e1e8fc43154b03b9a 306 SUPERFAMILY SSF161111 10 214 7.85E-33 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_12940 f315f3424f10221e1e8fc43154b03b9a 306 Pfam PF01545 Cation efflux family 14 213 3.5E-32 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AVL55_15590 c852a008701509ccfaa51f431d361376 466 Gene3D G3DSA:3.30.565.10 318 466 6.2E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_15590 c852a008701509ccfaa51f431d361376 466 Gene3D G3DSA:1.10.287.130 203 312 5.8E-16 T 11-10-2018 AVL55_15590 c852a008701509ccfaa51f431d361376 466 SMART SM00387 355 466 3.4E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_15590 c852a008701509ccfaa51f431d361376 466 SMART SM00388 253 311 3.7E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_15590 c852a008701509ccfaa51f431d361376 466 SUPERFAMILY SSF55874 300 464 5.76E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_15590 c852a008701509ccfaa51f431d361376 466 SUPERFAMILY SSF47384 236 310 5.1E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_15590 c852a008701509ccfaa51f431d361376 466 SMART SM00304 198 252 2.3E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_15590 c852a008701509ccfaa51f431d361376 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 464 2.0E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_15590 c852a008701509ccfaa51f431d361376 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 4.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15590 c852a008701509ccfaa51f431d361376 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 4.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 Gene3D G3DSA:2.120.10.90 504 750 2.3E-9 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 Gene3D G3DSA:1.10.268.10 373 458 2.8E-176 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 682 8.5E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 746 0.0 T 11-10-2018 AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 SUPERFAMILY SSF56719 35 487 2.22E-153 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 Gene3D G3DSA:3.30.1360.40 242 335 2.8E-176 T 11-10-2018 AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 SUPERFAMILY SSF101904 501 749 9.81E-49 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 Gene3D G3DSA:3.90.199.10 36 487 2.8E-176 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 SMART SM00434 15 465 2.4E-227 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.339 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_01830 38da81a7ee7c76861c26fb0592f52db6 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 471 4.0E-132 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 PIRSF PIRSF000161 1 267 2.2E-84 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 264 9.6E-87 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 SUPERFAMILY SSF55347 126 235 3.05E-34 T 11-10-2018 AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 SUPERFAMILY SSF51735 1 265 2.11E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 149 166 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 7.3E-35 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 Gene3D G3DSA:3.40.50.720 2 263 2.6E-96 T 11-10-2018 AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 Gene3D G3DSA:3.30.360.10 126 233 2.6E-96 T 11-10-2018 AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 263 4.3E-42 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_07445 e3988fdee89c3e0042ee90694aa529b6 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 264 33.362 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 SUPERFAMILY SSF46785 1 111 1.51E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 SUPERFAMILY SSF53850 89 287 1.41E-36 T 11-10-2018 AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 Gene3D G3DSA:3.40.190.10 90 289 2.0E-68 T 11-10-2018 AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 Pfam PF03466 LysR substrate binding domain 88 290 3.7E-35 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 Gene3D G3DSA:3.40.190.10 163 268 2.0E-68 T 11-10-2018 AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.9E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_05280 a443a8664396ebbc07d4120d29b32ee6 295 Gene3D G3DSA:1.10.10.10 1 89 4.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_07220 8f88d3193285175b1feaeabcd0fcf006 298 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 6.5E-18 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 AVL55_07220 8f88d3193285175b1feaeabcd0fcf006 298 SUPERFAMILY SSF51735 2 297 7.41E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_07220 8f88d3193285175b1feaeabcd0fcf006 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 1.2E-106 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 AVL55_07220 8f88d3193285175b1feaeabcd0fcf006 298 Gene3D G3DSA:3.40.50.720 1 286 5.1E-70 T 11-10-2018 AVL55_07220 8f88d3193285175b1feaeabcd0fcf006 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 1.0E-15 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 50 247 1.2E-82 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 Pfam PF00813 FliP family 50 243 1.8E-80 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 224 236 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 176 191 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 237 247 6.7E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 118 132 6.7E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 146 158 6.7E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 106 118 6.7E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 169 181 6.7E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 46 55 6.7E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 221 246 2.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 197 218 2.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 176 196 2.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 67 87 2.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 48 67 2.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AVL55_05170 33576a20de7bfce8d1da42f160bd57ee 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 106 2.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 Pfam PF07705 CARDB 133 244 3.9E-13 T 11-10-2018 IPR011635 CARDB domain AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 Gene3D G3DSA:2.60.40.10 121 255 1.5E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 Gene3D G3DSA:4.10.1080.10 905 1006 1.2E-15 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 Gene3D G3DSA:3.40.50.1820 455 660 2.6E-11 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 SUPERFAMILY SSF69318 962 1267 4.19E-11 T 11-10-2018 AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 SUPERFAMILY SSF53474 550 703 1.43E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 SUPERFAMILY SSF103647 917 1005 4.71E-13 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 SUPERFAMILY SSF69318 1192 1437 1.57E-10 T 11-10-2018 AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 Pfam PF02412 Thrombospondin type 3 repeat 1008 1029 0.034 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 Pfam PF02412 Thrombospondin type 3 repeat 949 971 4.0E-5 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AVL55_17380 26f64194a323875213d4c6d2af88ff5f 1447 Pfam PF02412 Thrombospondin type 3 repeat 926 947 0.0041 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 SUPERFAMILY SSF88659 165 239 3.84E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 326 39.42 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 Pfam PF04545 Sigma-70, region 4 260 313 4.9E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 SUPERFAMILY SSF88659 222 320 1.53E-25 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 Pfam PF04539 Sigma-70 region 3 172 247 7.2E-23 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 Gene3D G3DSA:1.10.10.10 243 317 9.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 Gene3D G3DSA:1.10.601.10 14 161 1.1E-45 T 11-10-2018 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 PRINTS PR00046 Major sigma-70 factor signature 264 276 9.6E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 PRINTS PR00046 Major sigma-70 factor signature 285 300 9.6E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 PRINTS PR00046 Major sigma-70 factor signature 300 311 9.6E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 PRINTS PR00046 Major sigma-70 factor signature 116 129 9.6E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 PRINTS PR00046 Major sigma-70 factor signature 140 148 9.6E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 Gene3D G3DSA:1.10.10.10 165 240 2.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 Pfam PF04542 Sigma-70 region 2 93 161 2.0E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 Pfam PF00140 Sigma-70 factor, region 1.2 54 84 5.6E-10 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 326 1.2E-138 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 89 315 9.5E-37 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 SUPERFAMILY SSF88946 54 162 3.14E-44 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 116 129 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_02595 64db1e7527ef5015bea26f50a18da839 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 285 311 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_10950 c1a07b00d11183326ff8b4da6b3d3d69 87 Gene3D G3DSA:3.40.50.1820 3 87 1.6E-10 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_10950 c1a07b00d11183326ff8b4da6b3d3d69 87 Pfam PF00326 Prolyl oligopeptidase family 33 86 4.5E-8 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_10950 c1a07b00d11183326ff8b4da6b3d3d69 87 SUPERFAMILY SSF53474 31 87 1.77E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_19445 f0aefdba56ceaaf6b1c38c135a62d21b 78 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 61 4.0E-16 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AVL55_19445 f0aefdba56ceaaf6b1c38c135a62d21b 78 SUPERFAMILY SSF118001 1 71 1.02E-25 T 11-10-2018 IPR036685 YehU-like superfamily AVL55_19445 f0aefdba56ceaaf6b1c38c135a62d21b 78 Gene3D G3DSA:1.10.10.610 1 76 7.6E-25 T 11-10-2018 IPR036685 YehU-like superfamily AVL55_19445 f0aefdba56ceaaf6b1c38c135a62d21b 78 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 3.5E-30 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AVL55_19445 f0aefdba56ceaaf6b1c38c135a62d21b 78 PIRSF PIRSF006169 1 76 7.0E-31 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AVL55_00935 502505c6a45a64709912e59c622104b4 333 Gene3D G3DSA:3.40.50.2300 63 305 4.0E-65 T 11-10-2018 AVL55_00935 502505c6a45a64709912e59c622104b4 333 Gene3D G3DSA:1.10.260.40 1 60 4.7E-25 T 11-10-2018 AVL55_00935 502505c6a45a64709912e59c622104b4 333 SMART SM00354 1 71 2.2E-31 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_00935 502505c6a45a64709912e59c622104b4 333 SUPERFAMILY SSF53822 61 330 8.34E-70 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_00935 502505c6a45a64709912e59c622104b4 333 Pfam PF13377 Periplasmic binding protein-like domain 169 329 6.9E-29 T 11-10-2018 AVL55_00935 502505c6a45a64709912e59c622104b4 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.0E-7 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_00935 502505c6a45a64709912e59c622104b4 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.0E-7 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_00935 502505c6a45a64709912e59c622104b4 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AVL55_00935 502505c6a45a64709912e59c622104b4 333 Gene3D G3DSA:3.40.50.2300 160 289 4.0E-65 T 11-10-2018 AVL55_00935 502505c6a45a64709912e59c622104b4 333 SUPERFAMILY SSF47413 1 59 1.29E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_00935 502505c6a45a64709912e59c622104b4 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.9E-21 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_13775 0f3c291f2fd746fd4fae3f9cccbc075f 345 SMART SM00530 25 86 2.2E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_13775 0f3c291f2fd746fd4fae3f9cccbc075f 345 Gene3D G3DSA:1.10.260.40 10 120 3.6E-23 T 11-10-2018 AVL55_13775 0f3c291f2fd746fd4fae3f9cccbc075f 345 Pfam PF13413 Helix-turn-helix domain 25 86 2.4E-15 T 11-10-2018 AVL55_13775 0f3c291f2fd746fd4fae3f9cccbc075f 345 Pfam PF13464 Domain of unknown function (DUF4115) 271 343 3.9E-21 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 AVL55_13775 0f3c291f2fd746fd4fae3f9cccbc075f 345 SUPERFAMILY SSF47413 22 87 2.95E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_19235 824e8793ae41f8597f12e839373ca191 253 SMART SM00062 21 240 5.3E-12 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_19235 824e8793ae41f8597f12e839373ca191 253 Gene3D G3DSA:3.40.190.10 31 237 4.2E-23 T 11-10-2018 AVL55_19235 824e8793ae41f8597f12e839373ca191 253 Gene3D G3DSA:3.40.190.10 102 201 4.2E-23 T 11-10-2018 AVL55_19235 824e8793ae41f8597f12e839373ca191 253 SUPERFAMILY SSF53850 22 237 1.75E-32 T 11-10-2018 AVL55_19235 824e8793ae41f8597f12e839373ca191 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 237 2.7E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Gene3D G3DSA:2.40.270.10 791 833 7.0E-7 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Gene3D G3DSA:2.40.270.10 1036 1242 9.1E-89 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Gene3D G3DSA:2.40.50.100 715 789 2.3E-32 T 11-10-2018 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1341 3.2E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 11-10-2018 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 592 657 1.2E-21 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 514 581 4.1E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Gene3D G3DSA:3.90.1110.10 307 439 1.9E-35 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1064 1076 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Gene3D G3DSA:3.90.1100.10 440 628 6.6E-70 T 11-10-2018 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 718 1264 8.3E-158 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.302 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Pfam PF04563 RNA polymerase beta subunit 26 501 7.4E-54 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 152 225 3.8E-7 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 357 455 4.5E-16 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Gene3D G3DSA:3.90.1100.10 18 173 4.8E-57 T 11-10-2018 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Gene3D G3DSA:3.90.1100.10 647 714 6.1E-21 T 11-10-2018 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 SUPERFAMILY SSF64484 11 1340 0.0 T 11-10-2018 AVL55_18240 4a7034e4a873f6b045bf1c25e3986e26 1342 Gene3D G3DSA:2.40.50.150 834 954 1.1E-43 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_09205 fdbeb102de300c7e1ef22d6e9ebc71c2 340 Gene3D G3DSA:2.40.40.10 109 203 7.7E-37 T 11-10-2018 IPR036908 RlpA-like domain superfamily AVL55_09205 fdbeb102de300c7e1ef22d6e9ebc71c2 340 Pfam PF03330 Lytic transglycolase 110 198 5.0E-26 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AVL55_09205 fdbeb102de300c7e1ef22d6e9ebc71c2 340 Pfam PF05036 Sporulation related domain 268 336 1.1E-7 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AVL55_09205 fdbeb102de300c7e1ef22d6e9ebc71c2 340 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 112 326 1.4E-48 T 11-10-2018 IPR012997 Rare lipoprotein A AVL55_09205 fdbeb102de300c7e1ef22d6e9ebc71c2 340 SUPERFAMILY SSF110997 266 335 6.28E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AVL55_09205 fdbeb102de300c7e1ef22d6e9ebc71c2 340 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 7 202 24.353 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AVL55_09205 fdbeb102de300c7e1ef22d6e9ebc71c2 340 SUPERFAMILY SSF50685 106 200 6.59E-10 T 11-10-2018 IPR036908 RlpA-like domain superfamily AVL55_03595 23906989c2aee4c295ed4bfce2610ff8 157 Pfam PF02470 MlaD protein 38 117 3.4E-19 T 11-10-2018 IPR003399 Mce/MlaD AVL55_03595 23906989c2aee4c295ed4bfce2610ff8 157 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 151 3.0E-53 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AVL55_15730 a6e48d9191b401411483936b387591a8 220 SUPERFAMILY SSF46785 9 101 1.34E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_15730 a6e48d9191b401411483936b387591a8 220 Gene3D G3DSA:1.20.120.530 71 219 1.3E-30 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AVL55_15730 a6e48d9191b401411483936b387591a8 220 Pfam PF07729 FCD domain 83 206 1.0E-25 T 11-10-2018 IPR011711 GntR, C-terminal AVL55_15730 a6e48d9191b401411483936b387591a8 220 SUPERFAMILY SSF48008 78 214 2.33E-29 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AVL55_15730 a6e48d9191b401411483936b387591a8 220 SMART SM00895 83 208 2.4E-24 T 11-10-2018 IPR011711 GntR, C-terminal AVL55_15730 a6e48d9191b401411483936b387591a8 220 SMART SM00345 15 73 1.3E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_15730 a6e48d9191b401411483936b387591a8 220 Gene3D G3DSA:1.10.10.10 4 70 1.4E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_15730 a6e48d9191b401411483936b387591a8 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 73 1.7E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_02930 3c16d8b85e430f6f6653aa2e99d80f4e 230 SUPERFAMILY SSF48317 26 224 7.59E-34 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AVL55_02930 3c16d8b85e430f6f6653aa2e99d80f4e 230 Pfam PF01569 PAP2 superfamily 102 222 2.9E-25 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AVL55_02930 3c16d8b85e430f6f6653aa2e99d80f4e 230 Gene3D G3DSA:1.20.144.10 133 229 1.4E-19 T 11-10-2018 AVL55_02930 3c16d8b85e430f6f6653aa2e99d80f4e 230 Gene3D G3DSA:1.20.144.10 25 132 5.5E-7 T 11-10-2018 AVL55_02930 3c16d8b85e430f6f6653aa2e99d80f4e 230 SMART SM00014 100 215 8.4E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 450 7.4E-72 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 SUPERFAMILY SSF51735 202 451 3.31E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 SMART SM00839 204 450 8.4E-67 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 Gene3D G3DSA:1.10.285.10 396 451 1.0E-7 T 11-10-2018 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 PIRSF PIRSF000185 20 451 9.1E-110 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 2.1E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 2.1E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 2.1E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 2.1E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 Gene3D G3DSA:1.10.285.10 8 384 2.8E-152 T 11-10-2018 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 185 4.2E-50 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 Gene3D G3DSA:3.40.50.720 209 373 2.8E-152 T 11-10-2018 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 SUPERFAMILY SSF53223 7 196 1.38E-68 T 11-10-2018 AVL55_09325 d8aa45e2b4e9da8a1f1a152beee6153d 451 Gene3D G3DSA:3.40.50.10860 55 190 2.8E-152 T 11-10-2018 AVL55_04235 fb48b82368f19f078763091c3a07ad15 373 PRINTS PR00164 ABC-2 type transport system membrane protein signature 255 279 2.3E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_04235 fb48b82368f19f078763091c3a07ad15 373 PRINTS PR00164 ABC-2 type transport system membrane protein signature 292 311 2.3E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_04235 fb48b82368f19f078763091c3a07ad15 373 PRINTS PR00164 ABC-2 type transport system membrane protein signature 312 331 2.3E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_04235 fb48b82368f19f078763091c3a07ad15 373 Pfam PF12698 ABC-2 family transporter protein 24 362 3.4E-32 T 11-10-2018 AVL55_01805 1b34adf3c54285ee936a30859bbd695a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.6E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_01805 1b34adf3c54285ee936a30859bbd695a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.6E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_01805 1b34adf3c54285ee936a30859bbd695a 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 2.8E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_01805 1b34adf3c54285ee936a30859bbd695a 215 Gene3D G3DSA:1.10.357.10 1 205 8.2E-45 T 11-10-2018 AVL55_01805 1b34adf3c54285ee936a30859bbd695a 215 SUPERFAMILY SSF46689 8 82 2.49E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_03565 094de820d49bd662a321eaafeb7fb752 192 Gene3D G3DSA:2.60.450.10 65 192 9.8E-42 T 11-10-2018 AVL55_03565 094de820d49bd662a321eaafeb7fb752 192 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 15 188 1.1E-46 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AVL55_03565 094de820d49bd662a321eaafeb7fb752 192 PIRSF PIRSF028513 6 192 1.6E-60 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AVL55_03565 094de820d49bd662a321eaafeb7fb752 192 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 16 188 1.0E-41 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AVL55_03565 094de820d49bd662a321eaafeb7fb752 192 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 7 191 25.065 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Gene3D G3DSA:3.30.70.940 3 125 3.4E-46 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Gene3D G3DSA:2.30.30.30 126 182 9.7E-25 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 PRINTS PR00338 Transcription termination factor NUSG signature 141 156 1.0E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 PRINTS PR00338 Transcription termination factor NUSG signature 159 175 1.0E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 PRINTS PR00338 Transcription termination factor NUSG signature 63 75 1.0E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 SMART SM00738 8 117 1.3E-46 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 11 182 6.3E-69 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Pfam PF02357 Transcription termination factor nusG 9 114 1.6E-25 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 8 183 24.31 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 SUPERFAMILY SSF50104 127 182 2.21E-18 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 ProSitePatterns PS01014 Transcription termination factor nusG signature. 166 175 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Pfam PF00467 KOW motif 132 162 2.0E-8 T 11-10-2018 IPR005824 KOW AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 SMART SM00739 129 156 7.7E-7 T 11-10-2018 IPR005824 KOW AVL55_18275 9bfb56e7c4e38d412ae7bd48bfb49af7 183 SUPERFAMILY SSF82679 8 119 2.22E-38 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AVL55_17790 b8f25cac649e8c0c4b79b745d0725cc0 417 Pfam PF13437 HlyD family secretion protein 265 374 1.0E-12 T 11-10-2018 AVL55_17790 b8f25cac649e8c0c4b79b745d0725cc0 417 SUPERFAMILY SSF56954 124 233 2.62E-5 T 11-10-2018 AVL55_17790 b8f25cac649e8c0c4b79b745d0725cc0 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 400 417 3.3E-17 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AVL55_17790 b8f25cac649e8c0c4b79b745d0725cc0 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 334 3.3E-17 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AVL55_17790 b8f25cac649e8c0c4b79b745d0725cc0 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.3E-17 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AVL55_17790 b8f25cac649e8c0c4b79b745d0725cc0 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 400 3.3E-17 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AVL55_17790 b8f25cac649e8c0c4b79b745d0725cc0 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 277 298 3.3E-17 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AVL55_03250 44c6b28beee1222f15352d321358c5cc 522 SUPERFAMILY SSF56801 7 521 5.76E-139 T 11-10-2018 AVL55_03250 44c6b28beee1222f15352d321358c5cc 522 Pfam PF00501 AMP-binding enzyme 18 431 5.1E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AVL55_03250 44c6b28beee1222f15352d321358c5cc 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 11-10-2018 IPR020845 AMP-binding, conserved site AVL55_03250 44c6b28beee1222f15352d321358c5cc 522 Gene3D G3DSA:3.30.300.310 428 522 1.4E-32 T 11-10-2018 AVL55_03250 44c6b28beee1222f15352d321358c5cc 522 Gene3D G3DSA:3.40.50.12780 2 427 7.1E-107 T 11-10-2018 AVL55_03250 44c6b28beee1222f15352d321358c5cc 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 513 2.5E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AVL55_18815 9c7cf26aadf022a77470a35e55bc7d88 138 SUPERFAMILY SSF75620 8 113 5.89E-12 T 11-10-2018 AVL55_18815 9c7cf26aadf022a77470a35e55bc7d88 138 Pfam PF00472 RF-1 domain 9 133 8.1E-22 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AVL55_18815 9c7cf26aadf022a77470a35e55bc7d88 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 22 38 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AVL55_18815 9c7cf26aadf022a77470a35e55bc7d88 138 Gene3D G3DSA:3.30.160.20 3 137 1.1E-37 T 11-10-2018 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 SUPERFAMILY SSF51905 2 314 1.4E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.7E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.7E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.7E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.7E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.7E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.7E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.7E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.7E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.7E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 6.9E-40 T 11-10-2018 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.9E-40 T 11-10-2018 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.9E-40 T 11-10-2018 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.9E-40 T 11-10-2018 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 6.9E-40 T 11-10-2018 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 8.8E-51 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 1.7E-123 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 Gene3D G3DSA:3.50.50.60 118 244 1.4E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_09140 a00413bfee9810684c06fcf7d9fd9973 321 Gene3D G3DSA:3.50.50.60 9 312 1.4E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 SMART SM00342 229 312 1.4E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 Gene3D G3DSA:1.10.10.60 263 316 1.3E-15 T 11-10-2018 AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 SUPERFAMILY SSF46689 213 263 3.94E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 Gene3D G3DSA:3.40.50.880 11 199 1.2E-30 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 312 1.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 296 1.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 SUPERFAMILY SSF46689 265 315 3.58E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 Pfam PF12833 Helix-turn-helix domain 235 314 2.1E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 SUPERFAMILY SSF52317 16 192 1.87E-24 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 266 308 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 Gene3D G3DSA:1.10.10.60 212 262 7.4E-12 T 11-10-2018 AVL55_12720 01a0f0aaefbc8e757b79d41a1912a47d 318 Pfam PF01965 DJ-1/PfpI family 68 174 3.2E-8 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AVL55_11630 12a7d76b8754d3cf185ac243142649fc 213 Gene3D G3DSA:3.10.450.50 99 210 4.5E-22 T 11-10-2018 AVL55_11630 12a7d76b8754d3cf185ac243142649fc 213 SUPERFAMILY SSF54427 139 181 2.85E-9 T 11-10-2018 IPR032710 NTF2-like domain superfamily AVL55_11630 12a7d76b8754d3cf185ac243142649fc 213 SUPERFAMILY SSF54427 23 82 2.63E-14 T 11-10-2018 IPR032710 NTF2-like domain superfamily AVL55_11630 12a7d76b8754d3cf185ac243142649fc 213 Pfam PF02810 SEC-C motif 192 209 9.4E-9 T 11-10-2018 IPR004027 SEC-C motif AVL55_11630 12a7d76b8754d3cf185ac243142649fc 213 SUPERFAMILY SSF103642 189 209 7.36E-7 T 11-10-2018 AVL55_11630 12a7d76b8754d3cf185ac243142649fc 213 Gene3D G3DSA:3.10.450.50 1 98 7.5E-21 T 11-10-2018 AVL55_03285 09537c6686dbde62204857258d7c1e2a 317 SUPERFAMILY SSF50249 205 310 6.85E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_03285 09537c6686dbde62204857258d7c1e2a 317 Gene3D G3DSA:3.30.1490.70 182 232 1.4E-17 T 11-10-2018 AVL55_03285 09537c6686dbde62204857258d7c1e2a 317 Pfam PF14743 DNA ligase OB-like domain 245 310 3.9E-28 T 11-10-2018 IPR029319 DNA ligase, OB-like domain AVL55_03285 09537c6686dbde62204857258d7c1e2a 317 Pfam PF01068 ATP dependent DNA ligase domain 32 231 1.4E-10 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AVL55_03285 09537c6686dbde62204857258d7c1e2a 317 SUPERFAMILY SSF56091 31 231 2.68E-36 T 11-10-2018 AVL55_03285 09537c6686dbde62204857258d7c1e2a 317 Gene3D G3DSA:3.30.470.30 57 181 6.0E-26 T 11-10-2018 AVL55_03285 09537c6686dbde62204857258d7c1e2a 317 Gene3D G3DSA:2.40.50.140 235 315 6.9E-9 T 11-10-2018 AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 Gene3D G3DSA:2.40.160.20 26 173 1.6E-7 T 11-10-2018 AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 Pfam PF02412 Thrombospondin type 3 repeat 182 200 0.0032 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 Pfam PF02412 Thrombospondin type 3 repeat 243 261 0.011 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 Pfam PF02412 Thrombospondin type 3 repeat 210 230 0.0017 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 Gene3D G3DSA:3.30.1330.60 272 391 2.3E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 Gene3D G3DSA:4.10.1080.10 175 261 2.1E-7 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 SUPERFAMILY SSF103647 180 263 4.05E-24 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 SUPERFAMILY SSF103088 256 388 2.88E-28 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 PRINTS PR01021 OMPA domain signature 317 332 2.7E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 PRINTS PR01021 OMPA domain signature 332 348 2.7E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_18580 c615c320fa564bbaaf99136c9f8223bc 398 Pfam PF00691 OmpA family 287 382 9.8E-18 T 11-10-2018 IPR006665 OmpA-like domain AVL55_16595 a108f3c3303f063dc1fe7d15f4db46f2 441 Gene3D G3DSA:3.30.70.100 322 423 1.7E-17 T 11-10-2018 AVL55_16595 a108f3c3303f063dc1fe7d15f4db46f2 441 SUPERFAMILY SSF50182 255 321 3.27E-14 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_16595 a108f3c3303f063dc1fe7d15f4db46f2 441 Pfam PF00924 Mechanosensitive ion channel 212 419 5.8E-46 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_16595 a108f3c3303f063dc1fe7d15f4db46f2 441 SUPERFAMILY SSF82689 324 430 5.1E-22 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AVL55_16595 a108f3c3303f063dc1fe7d15f4db46f2 441 Gene3D G3DSA:2.30.30.60 271 320 4.7E-11 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_16595 a108f3c3303f063dc1fe7d15f4db46f2 441 SUPERFAMILY SSF82861 172 253 5.23E-11 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AVL55_08815 4bd1960307110e6ec7a9c619db541234 328 SUPERFAMILY SSF82689 184 282 5.36E-24 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AVL55_08815 4bd1960307110e6ec7a9c619db541234 328 SUPERFAMILY SSF50182 116 181 6.54E-15 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_08815 4bd1960307110e6ec7a9c619db541234 328 Gene3D G3DSA:2.30.30.60 131 180 2.2E-12 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_08815 4bd1960307110e6ec7a9c619db541234 328 SUPERFAMILY SSF82861 28 114 1.7E-11 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AVL55_08815 4bd1960307110e6ec7a9c619db541234 328 Gene3D G3DSA:3.30.70.100 184 277 4.0E-22 T 11-10-2018 AVL55_08815 4bd1960307110e6ec7a9c619db541234 328 Pfam PF00924 Mechanosensitive ion channel 71 271 5.8E-47 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_09700 6d27e49ce515e61fa923b3c2f96722be 840 Gene3D G3DSA:1.10.439.10 56 224 1.9E-51 T 11-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 AVL55_09700 6d27e49ce515e61fa923b3c2f96722be 840 Gene3D G3DSA:2.30.120.10 334 410 5.8E-178 T 11-10-2018 AVL55_09700 6d27e49ce515e61fa923b3c2f96722be 840 Gene3D G3DSA:1.10.1400.10 551 762 5.8E-178 T 11-10-2018 AVL55_09700 6d27e49ce515e61fa923b3c2f96722be 840 Pfam PF01804 Penicillin amidase 63 828 7.7E-128 T 11-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AVL55_09700 6d27e49ce515e61fa923b3c2f96722be 840 Gene3D G3DSA:3.60.20.10 258 827 5.8E-178 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_09700 6d27e49ce515e61fa923b3c2f96722be 840 SUPERFAMILY SSF56235 57 837 2.16E-151 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_18500 748144499500f85a89fd7c537b90f152 383 SMART SM00244 71 231 6.4E-40 T 11-10-2018 IPR001107 Band 7 domain AVL55_18500 748144499500f85a89fd7c537b90f152 383 SUPERFAMILY SSF117892 104 236 2.48E-21 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AVL55_18500 748144499500f85a89fd7c537b90f152 383 Gene3D G3DSA:3.30.479.30 100 233 1.2E-18 T 11-10-2018 AVL55_18500 748144499500f85a89fd7c537b90f152 383 PRINTS PR00721 Stomatin signature 78 100 3.9E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AVL55_18500 748144499500f85a89fd7c537b90f152 383 PRINTS PR00721 Stomatin signature 125 146 3.9E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AVL55_18500 748144499500f85a89fd7c537b90f152 383 PRINTS PR00721 Stomatin signature 207 225 3.9E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AVL55_18500 748144499500f85a89fd7c537b90f152 383 TIGRFAM TIGR01933 hflK: HflK protein 73 333 9.9E-110 T 11-10-2018 IPR010201 HflK GO:0016021 AVL55_18500 748144499500f85a89fd7c537b90f152 383 Pfam PF01145 SPFH domain / Band 7 family 75 246 6.1E-26 T 11-10-2018 IPR001107 Band 7 domain AVL55_18500 748144499500f85a89fd7c537b90f152 383 Pfam PF12221 Bacterial membrane protein N terminal 1 43 4.2E-11 T 11-10-2018 IPR020980 Menbrane protein HflK, N-terminal AVL55_05605 2242e669835587f259167215f080fe3d 106 Pfam PF01381 Helix-turn-helix 12 63 4.5E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_05605 2242e669835587f259167215f080fe3d 106 SMART SM00530 11 66 4.5E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_05605 2242e669835587f259167215f080fe3d 106 Gene3D G3DSA:1.10.260.40 2 73 2.3E-16 T 11-10-2018 AVL55_05605 2242e669835587f259167215f080fe3d 106 SUPERFAMILY SSF47413 4 63 2.79E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_04155 58664e5adc24ac81bfeca8ab1aa16d01 527 Pfam PF00221 Aromatic amino acid lyase 23 489 3.6E-184 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AVL55_04155 58664e5adc24ac81bfeca8ab1aa16d01 527 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 15 523 43.897 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04155 58664e5adc24ac81bfeca8ab1aa16d01 527 Gene3D G3DSA:1.10.275.10 14 209 9.6E-69 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AVL55_04155 58664e5adc24ac81bfeca8ab1aa16d01 527 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 151 167 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AVL55_04155 58664e5adc24ac81bfeca8ab1aa16d01 527 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 18 522 1.0E-211 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04155 58664e5adc24ac81bfeca8ab1aa16d01 527 SUPERFAMILY SSF48557 19 518 6.44E-191 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AVL55_04155 58664e5adc24ac81bfeca8ab1aa16d01 527 Gene3D G3DSA:1.20.200.10 210 526 5.9E-120 T 11-10-2018 AVL55_02205 e6feaefd94a4706a8003f5ad97cd45d6 430 SMART SM00490 270 351 5.5E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_02205 e6feaefd94a4706a8003f5ad97cd45d6 430 Pfam PF00270 DEAD/DEAH box helicase 32 207 2.8E-44 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_02205 e6feaefd94a4706a8003f5ad97cd45d6 430 SMART SM00487 27 234 1.0E-51 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_02205 e6feaefd94a4706a8003f5ad97cd45d6 430 Gene3D G3DSA:3.40.50.300 2 222 6.9E-70 T 11-10-2018 AVL55_02205 e6feaefd94a4706a8003f5ad97cd45d6 430 Gene3D G3DSA:3.40.50.300 225 386 3.8E-48 T 11-10-2018 AVL55_02205 e6feaefd94a4706a8003f5ad97cd45d6 430 Pfam PF00271 Helicase conserved C-terminal domain 242 351 4.3E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_02205 e6feaefd94a4706a8003f5ad97cd45d6 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AVL55_02205 e6feaefd94a4706a8003f5ad97cd45d6 430 SUPERFAMILY SSF52540 83 363 1.99E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02205 e6feaefd94a4706a8003f5ad97cd45d6 430 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 7 389 50.678 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AVL55_11230 03ae699c36a5c960e8a99ffc61dbe107 237 SUPERFAMILY SSF56104 3 233 3.6E-79 T 11-10-2018 AVL55_11230 03ae699c36a5c960e8a99ffc61dbe107 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 30.936 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_11230 03ae699c36a5c960e8a99ffc61dbe107 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_11230 03ae699c36a5c960e8a99ffc61dbe107 237 Pfam PF01259 SAICAR synthetase 7 232 2.1E-64 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_11230 03ae699c36a5c960e8a99ffc61dbe107 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_11230 03ae699c36a5c960e8a99ffc61dbe107 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 6.6E-79 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AVL55_11230 03ae699c36a5c960e8a99ffc61dbe107 237 Gene3D G3DSA:3.30.200.20 7 232 1.4E-91 T 11-10-2018 AVL55_11230 03ae699c36a5c960e8a99ffc61dbe107 237 Gene3D G3DSA:3.30.470.20 85 221 1.4E-91 T 11-10-2018 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 482 515 0.0098 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 516 549 260.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 618 651 230.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 857 890 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 202 235 0.0045 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 32 65 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 824 856 300.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 168 201 29.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 550 583 53.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 312 345 230.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 891 924 30.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 720 753 0.063 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SMART SM00028 236 269 300.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 Pfam PF14559 Tetratricopeptide repeat 870 933 4.6E-7 T 11-10-2018 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 Pfam PF14559 Tetratricopeptide repeat 213 272 4.7E-9 T 11-10-2018 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SUPERFAMILY SSF48452 308 633 3.8E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SUPERFAMILY SSF48452 136 272 2.6E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 Gene3D G3DSA:1.25.40.10 31 103 5.7E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 Pfam PF13181 Tetratricopeptide repeat 482 513 0.0013 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 Pfam PF13181 Tetratricopeptide repeat 722 751 1.1E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 Gene3D G3DSA:1.25.40.10 106 276 5.4E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 15 918 1.1E-115 T 11-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 Gene3D G3DSA:1.25.40.10 639 936 5.5E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SUPERFAMILY SSF48452 36 118 1.52E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 Pfam PF13432 Tetratricopeptide repeat 325 380 0.016 T 11-10-2018 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SUPERFAMILY SSF48452 640 760 1.59E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 Gene3D G3DSA:1.25.40.10 278 638 3.6E-39 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13210 32377cd636836ce719551fd5f32bfac6 937 SUPERFAMILY SSF81901 720 919 2.01E-18 T 11-10-2018 AVL55_13860 c6c2104776d72e92638661d67d46941f 313 SUPERFAMILY SSF82866 72 290 8.37E-42 T 11-10-2018 AVL55_13860 c6c2104776d72e92638661d67d46941f 313 Pfam PF07549 SecD/SecF GG Motif 32 58 2.8E-9 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AVL55_13860 c6c2104776d72e92638661d67d46941f 313 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 283 4.1E-84 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AVL55_13860 c6c2104776d72e92638661d67d46941f 313 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 2.1E-54 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_13860 c6c2104776d72e92638661d67d46941f 313 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 28.011 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AVL55_13860 c6c2104776d72e92638661d67d46941f 313 Pfam PF02355 Protein export membrane protein 109 290 4.4E-68 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AVL55_13860 c6c2104776d72e92638661d67d46941f 313 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 3.9E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_13860 c6c2104776d72e92638661d67d46941f 313 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 3.9E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_13860 c6c2104776d72e92638661d67d46941f 313 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 3.9E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_13860 c6c2104776d72e92638661d67d46941f 313 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 3.9E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_13860 c6c2104776d72e92638661d67d46941f 313 Gene3D G3DSA:1.20.1640.10 96 296 7.0E-14 T 11-10-2018 AVL55_19820 32b0db882ae00cb6565b26b44ba10796 346 SMART SM00506 1 132 3.3E-27 T 11-10-2018 IPR002589 Macro domain AVL55_19820 32b0db882ae00cb6565b26b44ba10796 346 SUPERFAMILY SSF52949 1 149 1.21E-45 T 11-10-2018 AVL55_19820 32b0db882ae00cb6565b26b44ba10796 346 Gene3D G3DSA:3.40.220.10 1 148 1.9E-42 T 11-10-2018 AVL55_19820 32b0db882ae00cb6565b26b44ba10796 346 Pfam PF01661 Macro domain 18 130 1.2E-23 T 11-10-2018 IPR002589 Macro domain AVL55_05085 67ac3ce33c5caa93647c7b4509aec2ce 375 Gene3D G3DSA:3.90.1150.10 254 374 4.6E-26 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_05085 67ac3ce33c5caa93647c7b4509aec2ce 375 Gene3D G3DSA:3.40.640.10 1 251 3.0E-87 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_05085 67ac3ce33c5caa93647c7b4509aec2ce 375 SUPERFAMILY SSF53383 14 372 4.68E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_05085 67ac3ce33c5caa93647c7b4509aec2ce 375 PIRSF PIRSF000390 2 374 1.2E-93 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AVL55_05085 67ac3ce33c5caa93647c7b4509aec2ce 375 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 370 2.8E-106 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AVL55_06670 23c167caa4a6cb5b41477d4923f1f322 344 Gene3D G3DSA:2.40.420.20 266 333 3.9E-62 T 11-10-2018 AVL55_06670 23c167caa4a6cb5b41477d4923f1f322 344 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 334 5.7E-60 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_06670 23c167caa4a6cb5b41477d4923f1f322 344 SUPERFAMILY SSF111369 43 260 5.75E-35 T 11-10-2018 AVL55_06670 23c167caa4a6cb5b41477d4923f1f322 344 Gene3D G3DSA:2.40.30.170 43 265 3.9E-62 T 11-10-2018 AVL55_06670 23c167caa4a6cb5b41477d4923f1f322 344 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 254 3.3E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_06670 23c167caa4a6cb5b41477d4923f1f322 344 Gene3D G3DSA:1.10.287.470 90 149 3.9E-62 T 11-10-2018 AVL55_06670 23c167caa4a6cb5b41477d4923f1f322 344 Gene3D G3DSA:2.40.50.100 55 183 3.9E-62 T 11-10-2018 AVL55_10875 cc4d21b8a1c5c20dd922612370bb7e40 703 Gene3D G3DSA:3.40.50.150 457 644 4.5E-23 T 11-10-2018 AVL55_10875 cc4d21b8a1c5c20dd922612370bb7e40 703 SUPERFAMILY SSF53335 462 669 1.22E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_10875 cc4d21b8a1c5c20dd922612370bb7e40 703 Pfam PF13847 Methyltransferase domain 500 636 3.3E-10 T 11-10-2018 IPR025714 Methyltransferase domain AVL55_10875 cc4d21b8a1c5c20dd922612370bb7e40 703 SUPERFAMILY SSF56436 206 447 2.29E-50 T 11-10-2018 IPR016187 C-type lectin fold AVL55_10875 cc4d21b8a1c5c20dd922612370bb7e40 703 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 459 701 4.9E-101 T 11-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain AVL55_10875 cc4d21b8a1c5c20dd922612370bb7e40 703 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 6 446 1.3E-203 T 11-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase AVL55_10875 cc4d21b8a1c5c20dd922612370bb7e40 703 Pfam PF12867 DinB superfamily 30 160 4.9E-8 T 11-10-2018 IPR024775 DinB-like domain AVL55_10875 cc4d21b8a1c5c20dd922612370bb7e40 703 Pfam PF03781 Sulfatase-modifying factor enzyme 1 217 446 6.0E-25 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AVL55_10875 cc4d21b8a1c5c20dd922612370bb7e40 703 Gene3D G3DSA:3.90.1580.10 181 456 7.9E-22 T 11-10-2018 AVL55_14120 cf29c9cdb719faae6692b6c9129d36d3 382 Pfam PF13439 Glycosyltransferase Family 4 16 183 7.8E-11 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AVL55_14120 cf29c9cdb719faae6692b6c9129d36d3 382 SUPERFAMILY SSF53756 1 373 9.07E-64 T 11-10-2018 AVL55_14120 cf29c9cdb719faae6692b6c9129d36d3 382 Gene3D G3DSA:3.40.50.2000 180 350 1.2E-86 T 11-10-2018 AVL55_14120 cf29c9cdb719faae6692b6c9129d36d3 382 Pfam PF00534 Glycosyl transferases group 1 191 365 1.9E-37 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_14120 cf29c9cdb719faae6692b6c9129d36d3 382 Gene3D G3DSA:3.40.50.2000 5 179 1.2E-86 T 11-10-2018 AVL55_05040 0116332a2e04055e360c2dca8d96f09d 381 Gene3D G3DSA:3.40.640.10 1 254 5.2E-89 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_05040 0116332a2e04055e360c2dca8d96f09d 381 SUPERFAMILY SSF53383 6 380 1.08E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_05040 0116332a2e04055e360c2dca8d96f09d 381 Gene3D G3DSA:3.90.1150.10 255 381 4.7E-29 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_05040 0116332a2e04055e360c2dca8d96f09d 381 PIRSF PIRSF000390 1 381 3.0E-107 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AVL55_05040 0116332a2e04055e360c2dca8d96f09d 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 377 4.4E-116 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AVL55_00805 994685e788cc1f6c889ba81985856550 723 SUPERFAMILY SSF52540 6 643 1.82E-179 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00805 994685e788cc1f6c889ba81985856550 723 Gene3D G3DSA:1.10.486.10 383 539 1.5E-127 T 11-10-2018 AVL55_00805 994685e788cc1f6c889ba81985856550 723 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 7.7E-76 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AVL55_00805 994685e788cc1f6c889ba81985856550 723 Gene3D G3DSA:1.10.10.160 114 187 8.2E-102 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AVL55_00805 994685e788cc1f6c889ba81985856550 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 2.4E-78 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AVL55_00805 994685e788cc1f6c889ba81985856550 723 Gene3D G3DSA:3.40.50.300 282 637 1.5E-127 T 11-10-2018 AVL55_00805 994685e788cc1f6c889ba81985856550 723 Gene3D G3DSA:3.40.50.300 10 273 8.2E-102 T 11-10-2018 AVL55_00805 994685e788cc1f6c889ba81985856550 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 721 0.0 T 11-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AVL55_14040 8f0558896d217df07077990d30eb4f9a 369 Pfam PF00534 Glycosyl transferases group 1 179 339 4.4E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_14040 8f0558896d217df07077990d30eb4f9a 369 Pfam PF13439 Glycosyltransferase Family 4 14 171 1.9E-24 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AVL55_14040 8f0558896d217df07077990d30eb4f9a 369 Gene3D G3DSA:3.40.50.2000 168 346 6.2E-66 T 11-10-2018 AVL55_14040 8f0558896d217df07077990d30eb4f9a 369 SUPERFAMILY SSF53756 6 364 8.64E-70 T 11-10-2018 AVL55_14040 8f0558896d217df07077990d30eb4f9a 369 Gene3D G3DSA:3.40.50.2000 14 355 6.2E-66 T 11-10-2018 AVL55_18650 435d3d8aeefac477f22b76367dac9d60 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18650 435d3d8aeefac477f22b76367dac9d60 150 Gene3D G3DSA:3.40.5.10 1 50 5.5E-23 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18650 435d3d8aeefac477f22b76367dac9d60 150 Gene3D G3DSA:3.10.430.100 61 149 8.4E-29 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AVL55_18650 435d3d8aeefac477f22b76367dac9d60 150 SUPERFAMILY SSF55658 1 57 6.1E-18 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AVL55_18650 435d3d8aeefac477f22b76367dac9d60 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.9E-20 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18650 435d3d8aeefac477f22b76367dac9d60 150 SUPERFAMILY SSF55653 60 148 2.75E-24 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AVL55_18650 435d3d8aeefac477f22b76367dac9d60 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.146 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18650 435d3d8aeefac477f22b76367dac9d60 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.1E-52 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18650 435d3d8aeefac477f22b76367dac9d60 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 8.1E-24 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 SMART SM00870 4 322 9.2E-134 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 Gene3D G3DSA:3.40.50.40 208 335 6.2E-44 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 83 93 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 Gene3D G3DSA:3.40.50.1170 1 207 1.4E-86 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 PRINTS PR00139 Asparaginase/glutaminase family signature 259 277 6.5E-13 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 PRINTS PR00139 Asparaginase/glutaminase family signature 82 100 6.5E-13 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 6.5E-13 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 PIRSF PIRSF001220 1 333 9.2E-91 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 Pfam PF00710 Asparaginase, N-terminal 4 189 2.9E-65 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 334 1.6E-107 T 11-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 SUPERFAMILY SSF53774 2 334 2.62E-109 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AVL55_09180 79d1c3bc598ccf771523b98e097de22a 335 PIRSF PIRSF500176 1 331 1.6E-107 T 11-10-2018 AVL55_13815 a6c1e9732e7d213e551a692cf1f8dcd3 418 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 402 2.5E-67 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AVL55_13815 a6c1e9732e7d213e551a692cf1f8dcd3 418 Pfam PF01458 Uncharacterized protein family (UPF0051) 166 387 9.3E-57 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AVL55_13815 a6c1e9732e7d213e551a692cf1f8dcd3 418 SUPERFAMILY SSF101960 14 412 1.02E-87 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 Gene3D G3DSA:3.40.190.10 164 264 4.0E-47 T 11-10-2018 AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 9.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 SUPERFAMILY SSF46785 5 89 1.09E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 SUPERFAMILY SSF53850 93 293 1.98E-29 T 11-10-2018 AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 Gene3D G3DSA:3.40.190.10 94 292 4.0E-47 T 11-10-2018 AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 Pfam PF03466 LysR substrate binding domain 93 289 7.3E-30 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_04035 dd69eda6ae9c70e4eb67a15efcc6a3c7 302 Gene3D G3DSA:1.10.10.10 2 88 1.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_03710 e8d068a00bce7bf4694cb78a4c7165cb 211 Pfam PF01553 Acyltransferase 45 164 2.2E-15 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_03710 e8d068a00bce7bf4694cb78a4c7165cb 211 SMART SM00563 57 169 1.5E-17 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_03710 e8d068a00bce7bf4694cb78a4c7165cb 211 SUPERFAMILY SSF69593 29 170 6.54E-21 T 11-10-2018 AVL55_09135 708669c0554b4ea958a5a6a85f4d1859 248 Gene3D G3DSA:2.30.210.20 4 61 4.2E-25 T 11-10-2018 AVL55_09135 708669c0554b4ea958a5a6a85f4d1859 248 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 210 1.1E-70 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AVL55_09135 708669c0554b4ea958a5a6a85f4d1859 248 SUPERFAMILY SSF55729 3 224 4.45E-85 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_09135 708669c0554b4ea958a5a6a85f4d1859 248 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 222 5.6E-63 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AVL55_09135 708669c0554b4ea958a5a6a85f4d1859 248 Gene3D G3DSA:3.40.630.70 62 241 1.6E-61 T 11-10-2018 AVL55_09135 708669c0554b4ea958a5a6a85f4d1859 248 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 248 87.513 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 SUPERFAMILY SSF52313 6 231 1.7E-97 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 Gene3D G3DSA:1.10.287.610 103 150 2.0E-94 T 11-10-2018 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 Gene3D G3DSA:3.40.50.10490 8 219 2.0E-94 T 11-10-2018 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.6E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.6E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.6E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.6E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.6E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.6E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.7E-108 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 42.171 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_04690 15b55b650216e5f71449c9ca3856b700 243 Pfam PF00318 Ribosomal protein S2 9 224 3.4E-96 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18325 64447d49b17dddc87a214523c670f7a9 348 PIRSF PIRSF001237 1 345 2.1E-141 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_18325 64447d49b17dddc87a214523c670f7a9 348 Pfam PF01979 Amidohydrolase family 11 301 2.5E-13 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AVL55_18325 64447d49b17dddc87a214523c670f7a9 348 Gene3D G3DSA:3.20.20.140 2 344 2.3E-106 T 11-10-2018 AVL55_18325 64447d49b17dddc87a214523c670f7a9 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_18325 64447d49b17dddc87a214523c670f7a9 348 Hamap MF_00219 Dihydroorotase [pyrC]. 2 343 45.191 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_18325 64447d49b17dddc87a214523c670f7a9 348 SUPERFAMILY SSF51556 1 342 3.6E-143 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_18325 64447d49b17dddc87a214523c670f7a9 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_18325 64447d49b17dddc87a214523c670f7a9 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 9.8E-134 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_12260 4bd8226b8f40e8f4a8fbe7d55bc0dba0 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 357 1.5E-90 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AVL55_12260 4bd8226b8f40e8f4a8fbe7d55bc0dba0 384 Gene3D G3DSA:3.40.50.1970 1 181 1.4E-50 T 11-10-2018 AVL55_12260 4bd8226b8f40e8f4a8fbe7d55bc0dba0 384 Gene3D G3DSA:1.20.1090.10 182 383 1.1E-44 T 11-10-2018 AVL55_12260 4bd8226b8f40e8f4a8fbe7d55bc0dba0 384 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 261 281 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AVL55_12260 4bd8226b8f40e8f4a8fbe7d55bc0dba0 384 SUPERFAMILY SSF56796 2 364 6.28E-106 T 11-10-2018 AVL55_00575 9b4e195cc9cd5bd46461c2832bd96655 128 Pfam PF01042 Endoribonuclease L-PSP 9 124 3.0E-41 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AVL55_00575 9b4e195cc9cd5bd46461c2832bd96655 128 Gene3D G3DSA:3.30.1330.40 1 126 8.8E-49 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AVL55_00575 9b4e195cc9cd5bd46461c2832bd96655 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 1.4E-50 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AVL55_00575 9b4e195cc9cd5bd46461c2832bd96655 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 AVL55_00575 9b4e195cc9cd5bd46461c2832bd96655 128 SUPERFAMILY SSF55298 1 127 1.15E-44 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AVL55_11660 ee9d8213a82921343a4094159d050273 330 Pfam PF13478 XdhC Rossmann domain 176 316 4.0E-21 T 11-10-2018 IPR027051 XdhC Rossmann domain AVL55_11660 ee9d8213a82921343a4094159d050273 330 Gene3D G3DSA:3.40.50.720 175 329 6.5E-28 T 11-10-2018 AVL55_11660 ee9d8213a82921343a4094159d050273 330 Pfam PF02625 XdhC and CoxI family 18 80 4.8E-14 T 11-10-2018 IPR003777 XdhC- CoxI AVL55_03020 4385f3f631f193ce0219e4d5cb2cf395 210 PIRSF PIRSF001488 1 210 1.2E-50 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AVL55_03020 4385f3f631f193ce0219e4d5cb2cf395 210 ProSitePatterns PS00194 Thioredoxin family active site. 46 64 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AVL55_03020 4385f3f631f193ce0219e4d5cb2cf395 210 Gene3D G3DSA:3.40.30.10 23 209 6.9E-48 T 11-10-2018 AVL55_03020 4385f3f631f193ce0219e4d5cb2cf395 210 Pfam PF01323 DSBA-like thioredoxin domain 46 186 1.2E-18 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AVL55_03020 4385f3f631f193ce0219e4d5cb2cf395 210 SUPERFAMILY SSF52833 27 203 4.32E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_11635 2f7afb6568dd520dbfcd7edae5958ff2 324 Pfam PF00107 Zinc-binding dehydrogenase 151 282 8.6E-36 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_11635 2f7afb6568dd520dbfcd7edae5958ff2 324 SUPERFAMILY SSF51735 115 274 8.85E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_11635 2f7afb6568dd520dbfcd7edae5958ff2 324 SMART SM00829 10 322 5.6E-41 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_11635 2f7afb6568dd520dbfcd7edae5958ff2 324 SUPERFAMILY SSF50129 1 140 3.5E-40 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_11635 2f7afb6568dd520dbfcd7edae5958ff2 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 4.9E-11 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AVL55_11635 2f7afb6568dd520dbfcd7edae5958ff2 324 Gene3D G3DSA:3.90.180.10 13 318 4.6E-103 T 11-10-2018 AVL55_11635 2f7afb6568dd520dbfcd7edae5958ff2 324 Gene3D G3DSA:3.40.50.720 123 267 4.6E-103 T 11-10-2018 AVL55_07375 567e6e0a9fbded5fa9b0479fb305d03a 356 Pfam PF10503 Esterase PHB depolymerase 246 338 5.7E-6 T 11-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AVL55_07375 567e6e0a9fbded5fa9b0479fb305d03a 356 Pfam PF00326 Prolyl oligopeptidase family 41 193 7.3E-6 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_07375 567e6e0a9fbded5fa9b0479fb305d03a 356 Gene3D G3DSA:3.40.50.1820 32 169 3.9E-13 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_07375 567e6e0a9fbded5fa9b0479fb305d03a 356 SUPERFAMILY SSF53474 39 342 2.08E-74 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_07375 567e6e0a9fbded5fa9b0479fb305d03a 356 Gene3D G3DSA:3.40.50.1820 221 351 1.2E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_03700 d22ade40a771b858d7874bdc396db333 821 Pfam PF07452 CHRD domain 587 698 4.5E-24 T 11-10-2018 IPR010895 CHRD AVL55_03700 d22ade40a771b858d7874bdc396db333 821 Pfam PF07452 CHRD domain 712 816 2.8E-24 T 11-10-2018 IPR010895 CHRD AVL55_03700 d22ade40a771b858d7874bdc396db333 821 Pfam PF07452 CHRD domain 469 578 1.8E-28 T 11-10-2018 IPR010895 CHRD AVL55_03700 d22ade40a771b858d7874bdc396db333 821 Pfam PF14344 Domain of unknown function (DUF4397) 352 453 1.7E-12 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 AVL55_03700 d22ade40a771b858d7874bdc396db333 821 Pfam PF14344 Domain of unknown function (DUF4397) 38 158 5.2E-21 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 AVL55_03700 d22ade40a771b858d7874bdc396db333 821 Pfam PF14344 Domain of unknown function (DUF4397) 253 369 1.1E-21 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 AVL55_03700 d22ade40a771b858d7874bdc396db333 821 SMART SM00754 586 700 1.4E-19 T 11-10-2018 IPR010895 CHRD AVL55_03700 d22ade40a771b858d7874bdc396db333 821 SMART SM00754 466 580 3.4E-22 T 11-10-2018 IPR010895 CHRD AVL55_03700 d22ade40a771b858d7874bdc396db333 821 SMART SM00754 704 818 6.9E-35 T 11-10-2018 IPR010895 CHRD AVL55_16115 62d8e8dc76b063dbb78417dbb2198ea0 168 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 54 118 3.0E-4 T 11-10-2018 IPR010221 VCBS repeat AVL55_16115 62d8e8dc76b063dbb78417dbb2198ea0 168 Gene3D G3DSA:2.60.40.10 34 123 8.1E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_12135 21ba3262de5b196bb340c8681a63d0ec 230 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 12 224 1.0E-55 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AVL55_12135 21ba3262de5b196bb340c8681a63d0ec 230 Gene3D G3DSA:3.40.50.1360 2 230 4.0E-69 T 11-10-2018 AVL55_12135 21ba3262de5b196bb340c8681a63d0ec 230 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 227 7.5E-57 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AVL55_12135 21ba3262de5b196bb340c8681a63d0ec 230 SUPERFAMILY SSF100950 5 227 4.07E-54 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 364 7.5E-119 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 4.5E-37 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 4.5E-37 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 4.5E-37 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 4.5E-37 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 SUPERFAMILY SSF88697 275 364 4.2E-21 T 11-10-2018 IPR015947 PUA-like superfamily AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 Gene3D G3DSA:3.40.1160.10 3 262 5.5E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 SMART SM00359 275 357 4.9E-15 T 11-10-2018 IPR002478 PUA domain GO:0003723 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 Pfam PF00696 Amino acid kinase family 8 233 5.0E-36 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 SUPERFAMILY SSF53633 7 253 2.09E-59 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 ProSitePatterns PS00902 Glutamate 5-kinase signature. 205 222 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 Pfam PF01472 PUA domain 275 348 1.9E-18 T 11-10-2018 IPR002478 PUA domain GO:0003723 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 PIRSF PIRSF000729 3 366 8.6E-122 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 261 32.782 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AVL55_19715 5f350bec3fc7526ab6a884b54009a5bc 366 Gene3D G3DSA:2.30.130.10 264 365 5.1E-31 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.9E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.9E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.9E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.9E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.9E-25 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.3E-53 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 6.5E-58 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 Gene3D G3DSA:1.10.520.20 2 106 5.9E-37 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 SUPERFAMILY SSF47928 3 105 3.79E-24 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20010 36f6dfcba59524ceb761ac0ba3020834 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.673 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 Gene3D G3DSA:3.30.565.10 421 576 2.9E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 SUPERFAMILY SSF47384 322 374 3.92E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 Gene3D G3DSA:1.10.287.130 313 415 4.0E-19 T 11-10-2018 AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 SMART SM00387 463 575 1.7E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 SUPERFAMILY SSF55874 425 572 2.49E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 467 573 3.0E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 572 3.0E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 552 3.0E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 517 3.0E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03185 06d17974218372a6a8d99a3b4e33b42a 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 531 3.0E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17245 7142ee2753499a53e59bb1383f45b448 220 Pfam PF01797 Transposase IS200 like 14 123 4.6E-16 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AVL55_17245 7142ee2753499a53e59bb1383f45b448 220 SMART SM01321 9 125 5.7E-39 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AVL55_17245 7142ee2753499a53e59bb1383f45b448 220 SUPERFAMILY SSF143422 3 128 8.5E-32 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AVL55_17245 7142ee2753499a53e59bb1383f45b448 220 Gene3D G3DSA:3.30.70.1290 1 159 1.7E-40 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AVL55_08195 44967bf80d108854f376136c37d598e2 309 Gene3D G3DSA:3.30.465.10 75 200 2.0E-28 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AVL55_08195 44967bf80d108854f376136c37d598e2 309 SUPERFAMILY SSF56176 6 195 1.68E-30 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AVL55_08195 44967bf80d108854f376136c37d598e2 309 Pfam PF01565 FAD binding domain 20 147 2.1E-13 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AVL55_08195 44967bf80d108854f376136c37d598e2 309 SUPERFAMILY SSF56194 187 293 1.7E-28 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_08195 44967bf80d108854f376136c37d598e2 309 Gene3D G3DSA:3.90.78.10 202 301 1.4E-27 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_08195 44967bf80d108854f376136c37d598e2 309 Gene3D G3DSA:3.30.43.10 1 74 4.0E-17 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AVL55_08195 44967bf80d108854f376136c37d598e2 309 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 309 66.023 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_08195 44967bf80d108854f376136c37d598e2 309 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 12 289 6.2E-53 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_08195 44967bf80d108854f376136c37d598e2 309 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 186 289 1.1E-22 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_02565 33d91728243d6f17154f330195272758 95 Pfam PF00717 Peptidase S24-like 6 59 2.2E-8 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AVL55_02565 33d91728243d6f17154f330195272758 95 SUPERFAMILY SSF51306 2 76 7.98E-10 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AVL55_02565 33d91728243d6f17154f330195272758 95 Gene3D G3DSA:2.10.109.10 1 95 3.2E-8 T 11-10-2018 AVL55_11530 49efd399406346763ea0b75d01426bad 668 SUPERFAMILY SSF58104 359 668 3.66E-68 T 11-10-2018 AVL55_11530 49efd399406346763ea0b75d01426bad 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 466 632 1.2E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_11530 49efd399406346763ea0b75d01426bad 668 SMART SM00283 406 667 6.7E-57 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_11530 49efd399406346763ea0b75d01426bad 668 SMART SM00304 339 391 1.3E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_11530 49efd399406346763ea0b75d01426bad 668 Gene3D G3DSA:1.10.287.950 338 668 5.3E-66 T 11-10-2018 AVL55_11530 49efd399406346763ea0b75d01426bad 668 Pfam PF00672 HAMP domain 339 388 2.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_04020 9966bc9053daa94b805d871990332c32 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 221 2.6E-60 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AVL55_04020 9966bc9053daa94b805d871990332c32 238 Gene3D G3DSA:1.20.58.220 1 118 5.6E-36 T 11-10-2018 IPR038078 PhoU-like domain superfamily AVL55_04020 9966bc9053daa94b805d871990332c32 238 Gene3D G3DSA:1.20.58.220 123 236 1.5E-25 T 11-10-2018 IPR038078 PhoU-like domain superfamily AVL55_04020 9966bc9053daa94b805d871990332c32 238 Pfam PF01895 PhoU domain 131 213 4.5E-14 T 11-10-2018 IPR026022 PhoU domain AVL55_04020 9966bc9053daa94b805d871990332c32 238 Pfam PF01895 PhoU domain 26 112 3.4E-18 T 11-10-2018 IPR026022 PhoU domain AVL55_04020 9966bc9053daa94b805d871990332c32 238 PIRSF PIRSF003107 7 227 4.8E-60 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AVL55_04020 9966bc9053daa94b805d871990332c32 238 SUPERFAMILY SSF109755 13 233 1.26E-62 T 11-10-2018 AVL55_03090 f4c592e42f1a819aaed7f928f7dc9535 134 SUPERFAMILY SSF53850 14 132 1.37E-16 T 11-10-2018 AVL55_03090 f4c592e42f1a819aaed7f928f7dc9535 134 Gene3D G3DSA:3.40.190.10 18 133 5.7E-12 T 11-10-2018 AVL55_19630 9fb16cc3ad8c2d1adfd932f19115fbd7 817 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 13 807 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AVL55_19630 9fb16cc3ad8c2d1adfd932f19115fbd7 817 SMART SM00563 303 430 1.8E-28 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_19630 9fb16cc3ad8c2d1adfd932f19115fbd7 817 SUPERFAMILY SSF69593 244 490 4.32E-28 T 11-10-2018 AVL55_19630 9fb16cc3ad8c2d1adfd932f19115fbd7 817 PIRSF PIRSF500064 3 817 6.7E-267 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AVL55_19630 9fb16cc3ad8c2d1adfd932f19115fbd7 817 PIRSF PIRSF000437 19 817 4.0E-257 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AVL55_19630 9fb16cc3ad8c2d1adfd932f19115fbd7 817 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 816 26.673 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AVL55_19630 9fb16cc3ad8c2d1adfd932f19115fbd7 817 Pfam PF01553 Acyltransferase 295 427 5.3E-24 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_17000 0a5820558fa31edab226cbd490f1ad6f 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 445 6.8E-129 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AVL55_17000 0a5820558fa31edab226cbd490f1ad6f 446 Pfam PF02447 GntP family permease 7 444 3.2E-138 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AVL55_17000 0a5820558fa31edab226cbd490f1ad6f 446 PIRSF PIRSF002746 2 446 8.2E-150 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AVL55_17110 0aaacb65c11f6aad7e59fd09904b1d1c 1037 Pfam PF13620 Carboxypeptidase regulatory-like domain 35 113 3.2E-10 T 11-10-2018 AVL55_17110 0aaacb65c11f6aad7e59fd09904b1d1c 1037 Gene3D G3DSA:2.170.130.10 114 243 2.7E-5 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_17110 0aaacb65c11f6aad7e59fd09904b1d1c 1037 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 237 3.2E-5 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_17110 0aaacb65c11f6aad7e59fd09904b1d1c 1037 SUPERFAMILY SSF56935 119 979 8.7E-48 T 11-10-2018 AVL55_17110 0aaacb65c11f6aad7e59fd09904b1d1c 1037 Gene3D G3DSA:2.40.170.20 280 660 6.5E-16 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_02725 36d43d1bcca950a85fd8c6f7701c6512 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AVL55_02725 36d43d1bcca950a85fd8c6f7701c6512 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 11 261 19.976 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AVL55_02725 36d43d1bcca950a85fd8c6f7701c6512 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 1.0E-81 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AVL55_02725 36d43d1bcca950a85fd8c6f7701c6512 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 255 8.1E-82 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AVL55_12535 5ed7ae5333ee848e4236e0a22a5a91e3 260 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 12 254 1.3E-102 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AVL55_12535 5ed7ae5333ee848e4236e0a22a5a91e3 260 Gene3D G3DSA:1.20.1260.10 109 260 5.1E-51 T 11-10-2018 IPR012347 Ferritin-like AVL55_12535 5ed7ae5333ee848e4236e0a22a5a91e3 260 Gene3D G3DSA:1.20.1260.10 9 75 1.9E-16 T 11-10-2018 IPR012347 Ferritin-like AVL55_12535 5ed7ae5333ee848e4236e0a22a5a91e3 260 SUPERFAMILY SSF47240 13 257 5.18E-70 T 11-10-2018 IPR009078 Ferritin-like superfamily AVL55_12535 5ed7ae5333ee848e4236e0a22a5a91e3 260 PIRSF PIRSF020736 4 259 3.0E-87 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 SUPERFAMILY SSF64518 1 282 1.19E-91 T 11-10-2018 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 Gene3D G3DSA:1.20.58.1830 5 33 1.3E-73 T 11-10-2018 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 Gene3D G3DSA:1.20.58.1830 248 282 2.1E-42 T 11-10-2018 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 Gene3D G3DSA:1.20.1330.10 45 174 1.3E-73 T 11-10-2018 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 Gene3D G3DSA:1.20.1330.10 191 242 2.1E-42 T 11-10-2018 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 Pfam PF00700 Bacterial flagellin C-terminal helical region 198 282 3.4E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.8E-38 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 PRINTS PR00207 Flagellin signature 76 95 7.7E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 PRINTS PR00207 Flagellin signature 37 54 7.7E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_04920 4743af8108b570754a8e62f646a70f27 283 PRINTS PR00207 Flagellin signature 111 134 7.7E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_14645 e11135460e01948056eccd7537191636 327 Gene3D G3DSA:1.10.3720.10 95 313 7.2E-19 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_14645 e11135460e01948056eccd7537191636 327 SUPERFAMILY SSF161098 98 305 4.14E-13 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_14645 e11135460e01948056eccd7537191636 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 320 6.1E-33 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_09435 1c37b8a1ee66dd3e91e4fdd5024fdf4a 230 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 151 226 2.2E-20 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AVL55_09435 1c37b8a1ee66dd3e91e4fdd5024fdf4a 230 SUPERFAMILY SSF74653 143 223 4.32E-25 T 11-10-2018 AVL55_09435 1c37b8a1ee66dd3e91e4fdd5024fdf4a 230 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 151 228 6.3E-19 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AVL55_09435 1c37b8a1ee66dd3e91e4fdd5024fdf4a 230 Gene3D G3DSA:3.30.1150.10 129 229 3.5E-28 T 11-10-2018 AVL55_09435 1c37b8a1ee66dd3e91e4fdd5024fdf4a 230 PRINTS PR01374 Gram-negative bacterial tonB protein signature 185 202 1.1E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_09435 1c37b8a1ee66dd3e91e4fdd5024fdf4a 230 PRINTS PR01374 Gram-negative bacterial tonB protein signature 145 166 1.1E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_09435 1c37b8a1ee66dd3e91e4fdd5024fdf4a 230 PRINTS PR01374 Gram-negative bacterial tonB protein signature 166 184 1.1E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 SUPERFAMILY SSF63380 108 275 4.77E-34 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 Gene3D G3DSA:3.40.50.80 278 396 3.1E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 4 410 62.052 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 Pfam PF00970 Oxidoreductase FAD-binding domain 205 269 8.6E-10 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 PIRSF PIRSF000044 1 410 6.3E-217 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 SUPERFAMILY SSF52343 262 406 3.4E-37 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 Pfam PF00175 Oxidoreductase NAD-binding domain 280 388 3.7E-18 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 SUPERFAMILY SSF54292 38 125 5.54E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 Gene3D G3DSA:2.40.30.10 129 267 5.9E-50 T 11-10-2018 AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 6 410 1.6E-224 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 Gene3D G3DSA:3.10.20.30 37 128 1.8E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_17045 35370ad7c2340d750f95f786f0af0377 410 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 117 2.0E-9 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AVL55_07910 12ff1f8ac34f28a9034b81ca5bd94398 119 Pfam PF01638 HxlR-like helix-turn-helix 31 118 9.8E-25 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AVL55_07910 12ff1f8ac34f28a9034b81ca5bd94398 119 Gene3D G3DSA:1.10.10.10 4 119 7.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_07910 12ff1f8ac34f28a9034b81ca5bd94398 119 SUPERFAMILY SSF46785 17 117 3.24E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_19565 e1a8bc1d3710ee6389f14e15e5a15781 195 SUPERFAMILY SSF55729 1 181 1.06E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_19565 e1a8bc1d3710ee6389f14e15e5a15781 195 Gene3D G3DSA:3.40.630.30 4 188 1.0E-28 T 11-10-2018 AVL55_19565 e1a8bc1d3710ee6389f14e15e5a15781 195 Pfam PF00583 Acetyltransferase (GNAT) family 59 179 1.2E-11 T 11-10-2018 IPR000182 GNAT domain AVL55_19010 e7c0e2862a8bce8cd6c8de1f8d59faad 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 9 457 1.6E-179 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AVL55_19010 e7c0e2862a8bce8cd6c8de1f8d59faad 462 Gene3D G3DSA:3.40.50.1220 278 460 1.4E-80 T 11-10-2018 AVL55_19010 e7c0e2862a8bce8cd6c8de1f8d59faad 462 SUPERFAMILY SSF52467 286 460 6.8E-68 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AVL55_19010 e7c0e2862a8bce8cd6c8de1f8d59faad 462 PIRSF PIRSF000204 4 461 4.0E-173 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AVL55_02860 69be6297bfe65998c3224235348df33e 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 202 5.9E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_02860 69be6297bfe65998c3224235348df33e 233 Gene3D G3DSA:3.40.50.1000 22 219 4.4E-48 T 11-10-2018 IPR023214 HAD superfamily AVL55_02860 69be6297bfe65998c3224235348df33e 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 2.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_02860 69be6297bfe65998c3224235348df33e 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 116 129 2.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_02860 69be6297bfe65998c3224235348df33e 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 19 30 2.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_02860 69be6297bfe65998c3224235348df33e 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 163 2.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_02860 69be6297bfe65998c3224235348df33e 233 Gene3D G3DSA:1.10.150.240 32 103 4.4E-48 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AVL55_02860 69be6297bfe65998c3224235348df33e 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 202 6.3E-30 T 11-10-2018 AVL55_02860 69be6297bfe65998c3224235348df33e 233 SUPERFAMILY SSF56784 20 228 2.59E-43 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 354 413 5.0E-14 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 Gene3D G3DSA:2.40.50.180 624 687 1.1E-33 T 11-10-2018 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 SUPERFAMILY SSF55874 416 599 5.63E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 Gene3D G3DSA:2.30.30.40 601 728 1.1E-33 T 11-10-2018 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 Gene3D G3DSA:3.30.565.10 414 600 3.4E-56 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 SMART SM00387 458 601 4.8E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 SUPERFAMILY SSF50341 600 732 4.84E-28 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 SMART SM00260 593 732 6.9E-33 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 SUPERFAMILY SSF47226 6 125 3.4E-31 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 Gene3D G3DSA:1.10.287.560 353 413 9.1E-20 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 SMART SM01231 353 413 2.5E-18 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 517 9.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 579 9.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 9.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 598 9.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 Pfam PF01584 CheW-like domain 607 734 5.1E-23 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 SUPERFAMILY SSF47384 354 414 1.33E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 Gene3D G3DSA:1.20.120.160 2 140 3.0E-37 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 SMART SM00073 6 103 3.7E-23 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 Pfam PF01627 Hpt domain 8 103 1.3E-18 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_05220 ff4aa0aecc51c14d636aa8aeccdccd35 741 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 461 600 1.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_04770 be2ea14f460eb551253965002c6edc02 441 Pfam PF01171 PP-loop family 31 210 3.1E-53 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AVL55_04770 be2ea14f460eb551253965002c6edc02 441 Pfam PF11734 TilS substrate C-terminal domain 367 418 4.1E-8 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AVL55_04770 be2ea14f460eb551253965002c6edc02 441 SUPERFAMILY SSF52402 30 240 2.0E-56 T 11-10-2018 AVL55_04770 be2ea14f460eb551253965002c6edc02 441 Pfam PF09179 TilS substrate binding domain 261 324 2.4E-14 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AVL55_04770 be2ea14f460eb551253965002c6edc02 441 SUPERFAMILY SSF82829 246 326 1.83E-15 T 11-10-2018 AVL55_04770 be2ea14f460eb551253965002c6edc02 441 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 13 320 22.759 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AVL55_04770 be2ea14f460eb551253965002c6edc02 441 Gene3D G3DSA:3.40.50.620 23 242 1.8E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_04770 be2ea14f460eb551253965002c6edc02 441 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 31 213 1.3E-53 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AVL55_04770 be2ea14f460eb551253965002c6edc02 441 SUPERFAMILY SSF56037 341 419 3.14E-8 T 11-10-2018 AVL55_04770 be2ea14f460eb551253965002c6edc02 441 Gene3D G3DSA:1.20.59.20 245 327 1.5E-14 T 11-10-2018 AVL55_07730 49dd4dd9c1aeb15b7db4e93984949935 261 SUPERFAMILY SSF47598 1 33 3.33E-12 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AVL55_07730 49dd4dd9c1aeb15b7db4e93984949935 261 SUPERFAMILY SSF82808 144 254 4.84E-36 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AVL55_07730 49dd4dd9c1aeb15b7db4e93984949935 261 Pfam PF03925 SeqA protein C-terminal domain 150 253 2.1E-34 T 11-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AVL55_07730 49dd4dd9c1aeb15b7db4e93984949935 261 Gene3D G3DSA:1.20.1380.10 142 255 5.4E-40 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AVL55_07730 49dd4dd9c1aeb15b7db4e93984949935 261 Pfam PF17206 SeqA protein N-terminal domain 1 33 1.2E-20 T 11-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AVL55_07730 49dd4dd9c1aeb15b7db4e93984949935 261 Gene3D G3DSA:1.10.1220.10 1 38 4.6E-22 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AVL55_13120 c49339628dfaabf1d12ef30c5052e2a8 178 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 6 175 37.219 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AVL55_13120 c49339628dfaabf1d12ef30c5052e2a8 178 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 6 174 3.0E-68 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AVL55_13120 c49339628dfaabf1d12ef30c5052e2a8 178 SUPERFAMILY SSF53271 6 175 8.88E-50 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AVL55_13120 c49339628dfaabf1d12ef30c5052e2a8 178 Gene3D G3DSA:3.40.50.2020 2 178 1.7E-63 T 11-10-2018 AVL55_13120 c49339628dfaabf1d12ef30c5052e2a8 178 Pfam PF00156 Phosphoribosyl transferase domain 28 144 2.2E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AVL55_18960 b349eee2eb5c6dacc2e347d82536dc55 270 SUPERFAMILY SSF100950 93 245 4.03E-24 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_18960 b349eee2eb5c6dacc2e347d82536dc55 270 Pfam PF08220 DeoR-like helix-turn-helix domain 10 61 8.6E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AVL55_18960 b349eee2eb5c6dacc2e347d82536dc55 270 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 60 7.4E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AVL55_18960 b349eee2eb5c6dacc2e347d82536dc55 270 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 42 7.4E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AVL55_18960 b349eee2eb5c6dacc2e347d82536dc55 270 ProSitePatterns PS00894 DeoR-type HTH domain signature. 10 44 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AVL55_18960 b349eee2eb5c6dacc2e347d82536dc55 270 SMART SM01134 85 246 1.8E-45 T 11-10-2018 AVL55_18960 b349eee2eb5c6dacc2e347d82536dc55 270 SMART SM00420 10 62 8.2E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AVL55_18960 b349eee2eb5c6dacc2e347d82536dc55 270 SUPERFAMILY SSF46785 7 69 9.58E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_18960 b349eee2eb5c6dacc2e347d82536dc55 270 Pfam PF00455 DeoR C terminal sensor domain 93 245 6.2E-38 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AVL55_16515 36a7c8fc3466d4bceef513a7b60d2aee 481 Pfam PF07012 Curlin associated repeat 175 209 1.7E-6 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AVL55_16515 36a7c8fc3466d4bceef513a7b60d2aee 481 Pfam PF07012 Curlin associated repeat 288 321 1.6E-6 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AVL55_16515 36a7c8fc3466d4bceef513a7b60d2aee 481 Pfam PF07012 Curlin associated repeat 336 373 1.8E-4 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AVL55_16515 36a7c8fc3466d4bceef513a7b60d2aee 481 Pfam PF07012 Curlin associated repeat 391 421 2.3E-4 T 11-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AVL55_17255 d76987ebeb9000c6ae25d0505aa59a5c 468 Gene3D G3DSA:2.60.120.10 342 453 4.7E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_17255 d76987ebeb9000c6ae25d0505aa59a5c 468 SUPERFAMILY SSF51182 181 465 3.09E-88 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_17255 d76987ebeb9000c6ae25d0505aa59a5c 468 Pfam PF01050 Mannose-6-phosphate isomerase 311 461 5.8E-74 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AVL55_17255 d76987ebeb9000c6ae25d0505aa59a5c 468 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 465 8.1E-226 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AVL55_17255 d76987ebeb9000c6ae25d0505aa59a5c 468 Pfam PF00483 Nucleotidyl transferase 2 282 2.9E-71 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AVL55_17255 d76987ebeb9000c6ae25d0505aa59a5c 468 Gene3D G3DSA:3.90.550.10 1 341 1.3E-121 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17255 d76987ebeb9000c6ae25d0505aa59a5c 468 SUPERFAMILY SSF53448 1 276 5.41E-73 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.877 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 Gene3D G3DSA:3.30.300.10 5 233 3.6E-178 T 11-10-2018 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 1.1E-195 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 SUPERFAMILY SSF55973 4 109 1.06E-47 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 Gene3D G3DSA:3.30.300.10 103 372 3.6E-178 T 11-10-2018 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 Gene3D G3DSA:3.30.300.10 11 270 3.6E-178 T 11-10-2018 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 SUPERFAMILY SSF55973 233 379 2.83E-70 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 SUPERFAMILY SSF55973 111 232 1.2E-52 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 4.9E-45 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.3E-43 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 5.1E-69 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_03915 caa83f0e959503b883fbf8e445ecbbbd 381 PIRSF PIRSF000497 1 381 1.4E-173 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 117 3.9E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 31.362 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 Pfam PF01245 Ribosomal protein L19 8 117 5.0E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 Gene3D G3DSA:2.30.30.790 1 119 3.9E-14 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 SUPERFAMILY SSF50104 6 118 2.91E-46 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 PIRSF PIRSF002191 1 119 9.1E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 PRINTS PR00061 Ribosomal protein L19 signature 8 37 2.7E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 PRINTS PR00061 Ribosomal protein L19 signature 38 67 2.7E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06705 1e6fc2ae671d3b0f14ccdd590ff7997d 119 PRINTS PR00061 Ribosomal protein L19 signature 92 117 2.7E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 SUPERFAMILY SSF101386 116 205 7.66E-25 T 11-10-2018 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 Gene3D G3DSA:3.10.20.400 3 98 1.2E-34 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 117 200 2.0E-29 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 118 203 6.2E-16 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 106 8.0E-18 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 107 2.7E-31 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 114 200 18.766 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 9 205 36.856 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 Gene3D G3DSA:1.10.287.1080 114 205 5.3E-29 T 11-10-2018 AVL55_13045 5b51e48e873b228cee108f2ad91a5d5d 205 SUPERFAMILY SSF141734 9 120 7.72E-45 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 SMART SM00955 260 588 2.4E-183 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 SMART SM00316 639 722 1.4E-15 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 Pfam PF00575 S1 RNA binding domain 639 719 9.6E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 SUPERFAMILY SSF50249 641 720 5.72E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 Gene3D G3DSA:2.40.50.140 69 148 1.7E-16 T 11-10-2018 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 SUPERFAMILY SSF50249 67 147 1.55E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 Hamap MF_01895 Ribonuclease R [rnr]. 38 722 55.98 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 Pfam PF00773 RNB domain 260 587 6.8E-109 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 SUPERFAMILY SSF50249 187 640 1.35E-147 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 Pfam PF08206 Ribonuclease B OB domain 87 141 4.5E-18 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 721 1.4E-270 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 SMART SM00357 86 145 3.6E-9 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 Gene3D G3DSA:2.40.50.140 642 765 1.5E-22 T 11-10-2018 AVL55_17585 a1c28a875cca98566aecdbdf03f32d56 805 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 72 719 4.7E-253 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 8 25 4.9E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 Gene3D G3DSA:3.30.365.10 605 751 2.5E-36 T 11-10-2018 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 SUPERFAMILY SSF56003 323 747 1.86E-109 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 Gene3D G3DSA:3.30.365.10 352 443 2.2E-47 T 11-10-2018 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 Gene3D G3DSA:3.90.1170.50 180 290 5.9E-9 T 11-10-2018 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 SMART SM01008 211 300 1.9E-16 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 SUPERFAMILY SSF56003 49 244 5.93E-33 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 47 194 1.8E-14 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 619 701 1.5E-14 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 320 602 4.3E-31 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 Gene3D G3DSA:3.30.365.10 47 179 8.9E-21 T 11-10-2018 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 Gene3D G3DSA:3.30.365.10 328 548 2.2E-47 T 11-10-2018 AVL55_09050 a0db3136a4290688ba8b425e9b666f99 753 PIRSF PIRSF036389 1 753 1.9E-228 T 11-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AVL55_19600 07fdb4fbfdff3b5b40a27d2321bb9488 297 SUPERFAMILY SSF81452 8 297 3.03E-77 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19600 07fdb4fbfdff3b5b40a27d2321bb9488 297 Gene3D G3DSA:1.10.287.70 4 81 3.3E-17 T 11-10-2018 AVL55_19600 07fdb4fbfdff3b5b40a27d2321bb9488 297 Pfam PF00510 Cytochrome c oxidase subunit III 13 296 3.0E-48 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19600 07fdb4fbfdff3b5b40a27d2321bb9488 297 Gene3D G3DSA:1.20.120.80 82 297 5.0E-63 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_18605 ccf9b62a7f690fad40014c7a8308b9a4 191 SUPERFAMILY SSF88946 16 114 1.67E-28 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_18605 ccf9b62a7f690fad40014c7a8308b9a4 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 184 1.4E-24 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_18605 ccf9b62a7f690fad40014c7a8308b9a4 191 Gene3D G3DSA:1.10.1740.10 15 128 1.1E-30 T 11-10-2018 AVL55_18605 ccf9b62a7f690fad40014c7a8308b9a4 191 Pfam PF04542 Sigma-70 region 2 38 104 9.2E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_18605 ccf9b62a7f690fad40014c7a8308b9a4 191 Pfam PF08281 Sigma-70, region 4 132 182 1.4E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_18605 ccf9b62a7f690fad40014c7a8308b9a4 191 Gene3D G3DSA:1.10.10.10 129 187 9.0E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_18605 ccf9b62a7f690fad40014c7a8308b9a4 191 SUPERFAMILY SSF88659 130 186 5.01E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_06370 712dc97a5edc19fc996c7140a53c5810 211 TIGRFAM TIGR01298 RNaseT: ribonuclease T 8 206 1.8E-97 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AVL55_06370 712dc97a5edc19fc996c7140a53c5810 211 SUPERFAMILY SSF53098 7 205 2.63E-58 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_06370 712dc97a5edc19fc996c7140a53c5810 211 Hamap MF_00157 Ribonuclease T [rnt]. 1 211 107.962 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AVL55_06370 712dc97a5edc19fc996c7140a53c5810 211 Pfam PF00929 Exonuclease 18 192 1.1E-37 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_06370 712dc97a5edc19fc996c7140a53c5810 211 Gene3D G3DSA:3.30.420.10 7 210 3.7E-55 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_06370 712dc97a5edc19fc996c7140a53c5810 211 SMART SM00479 16 201 1.2E-30 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_06675 cfcceaabadb81f61e13c5fd3846d0b01 602 SUPERFAMILY SSF52540 359 600 4.33E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06675 cfcceaabadb81f61e13c5fd3846d0b01 602 Gene3D G3DSA:3.40.50.300 354 601 1.3E-90 T 11-10-2018 AVL55_06675 cfcceaabadb81f61e13c5fd3846d0b01 602 Pfam PF00664 ABC transporter transmembrane region 31 293 9.2E-54 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AVL55_06675 cfcceaabadb81f61e13c5fd3846d0b01 602 Gene3D G3DSA:1.20.1560.10 10 336 6.8E-80 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_06675 cfcceaabadb81f61e13c5fd3846d0b01 602 SMART SM00382 389 575 2.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_06675 cfcceaabadb81f61e13c5fd3846d0b01 602 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_06675 cfcceaabadb81f61e13c5fd3846d0b01 602 SUPERFAMILY SSF90123 16 327 3.14E-72 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_06675 cfcceaabadb81f61e13c5fd3846d0b01 602 Pfam PF00005 ABC transporter 381 529 2.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_03390 f7af00236b4fd0db451e4ce663c99bb9 486 Gene3D G3DSA:2.40.50.140 39 125 5.0E-19 T 11-10-2018 AVL55_03390 f7af00236b4fd0db451e4ce663c99bb9 486 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 63 476 6.1E-90 T 11-10-2018 AVL55_03390 f7af00236b4fd0db451e4ce663c99bb9 486 SUPERFAMILY SSF53335 114 483 9.65E-66 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_03390 f7af00236b4fd0db451e4ce663c99bb9 486 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 415 445 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AVL55_03390 f7af00236b4fd0db451e4ce663c99bb9 486 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 137 483 8.7E-22 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AVL55_03390 f7af00236b4fd0db451e4ce663c99bb9 486 Gene3D G3DSA:3.40.50.150 126 478 2.4E-94 T 11-10-2018 AVL55_03390 f7af00236b4fd0db451e4ce663c99bb9 486 Gene3D G3DSA:3.40.1350.30 173 316 2.4E-94 T 11-10-2018 AVL55_03390 f7af00236b4fd0db451e4ce663c99bb9 486 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 57 484 54.92 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AVL55_03390 f7af00236b4fd0db451e4ce663c99bb9 486 SUPERFAMILY SSF50249 51 104 2.74E-6 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_14815 19576524fbcb294cd83be307a24ca052 301 Gene3D G3DSA:3.40.190.10 100 291 2.0E-33 T 11-10-2018 AVL55_14815 19576524fbcb294cd83be307a24ca052 301 Gene3D G3DSA:1.10.10.10 5 95 1.5E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_14815 19576524fbcb294cd83be307a24ca052 301 SUPERFAMILY SSF53850 88 296 8.32E-26 T 11-10-2018 AVL55_14815 19576524fbcb294cd83be307a24ca052 301 Pfam PF03466 LysR substrate binding domain 87 295 2.8E-24 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_14815 19576524fbcb294cd83be307a24ca052 301 SUPERFAMILY SSF46785 2 85 2.63E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_14815 19576524fbcb294cd83be307a24ca052 301 Gene3D G3DSA:3.40.190.10 159 265 2.0E-33 T 11-10-2018 AVL55_14815 19576524fbcb294cd83be307a24ca052 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.8E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_14815 19576524fbcb294cd83be307a24ca052 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.3E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_14815 19576524fbcb294cd83be307a24ca052 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.3E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_14815 19576524fbcb294cd83be307a24ca052 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.3E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Gene3D G3DSA:3.40.50.2300 1069 1206 1.7E-8 T 11-10-2018 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Gene3D G3DSA:2.60.40.10 645 769 7.1E-30 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SMART SM00388 834 899 3.0E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SUPERFAMILY SSF63829 200 499 5.89E-16 T 11-10-2018 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SUPERFAMILY SSF47384 820 900 1.43E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 947 1058 6.2E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SUPERFAMILY SSF55874 888 1060 4.71E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Gene3D G3DSA:3.40.50.12740 1248 1376 1.6E-41 T 11-10-2018 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Gene3D G3DSA:3.30.565.10 898 1068 3.8E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Gene3D G3DSA:2.130.10.10 1 247 3.4E-56 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SUPERFAMILY SSF52172 1249 1374 7.12E-38 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SUPERFAMILY SSF63829 388 632 9.48E-16 T 11-10-2018 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Gene3D G3DSA:1.10.287.130 799 897 7.1E-30 T 11-10-2018 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Gene3D G3DSA:2.130.10.10 524 642 1.6E-24 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Gene3D G3DSA:2.130.10.10 289 523 3.4E-28 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SUPERFAMILY SSF50998 22 267 4.79E-12 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SMART SM00387 946 1063 1.2E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Pfam PF00512 His Kinase A (phospho-acceptor) domain 835 899 4.2E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Pfam PF00072 Response regulator receiver domain 1251 1369 2.8E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SUPERFAMILY SSF52172 1078 1207 2.99E-11 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1006 1016 8.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 988 1002 8.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1023 1041 8.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1047 1060 8.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Pfam PF07495 Y_Y_Y domain 693 756 5.8E-19 T 11-10-2018 IPR011123 Two component regulator three Y AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Pfam PF07494 Two component regulator propeller 475 497 0.0062 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Pfam PF07494 Two component regulator propeller 16 35 7.8E-4 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 Pfam PF07494 Two component regulator propeller 108 131 7.2E-4 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SMART SM00448 1249 1369 3.5E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12740 2ae2abc1ddd13596c6812aef76f3245d 1377 SMART SM00448 1079 1200 0.19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12500 772374c7d36d6450414bbf30f41db532 498 Gene3D G3DSA:3.20.20.80 9 421 7.1E-128 T 11-10-2018 AVL55_12500 772374c7d36d6450414bbf30f41db532 498 SUPERFAMILY SSF51445 4 440 3.05E-75 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_12500 772374c7d36d6450414bbf30f41db532 498 SMART SM00642 8 437 1.0E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_12500 772374c7d36d6450414bbf30f41db532 498 Gene3D G3DSA:3.90.400.10 90 180 7.1E-128 T 11-10-2018 AVL55_12500 772374c7d36d6450414bbf30f41db532 498 PIRSF PIRSF003059 1 496 1.4E-150 T 11-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related AVL55_12500 772374c7d36d6450414bbf30f41db532 498 Pfam PF00128 Alpha amylase, catalytic domain 36 231 1.2E-10 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_12500 772374c7d36d6450414bbf30f41db532 498 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 481 5.1E-129 T 11-10-2018 IPR022527 Sucrose phosphorylase GO:0004645|GO:0044262 AVL55_08035 da559f773dcadaf98c1c6a7c6808fadf 422 PIRSF PIRSF000524 12 417 1.7E-104 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AVL55_08035 da559f773dcadaf98c1c6a7c6808fadf 422 Pfam PF00266 Aminotransferase class-V 44 220 4.1E-25 T 11-10-2018 IPR000192 Aminotransferase class V domain AVL55_08035 da559f773dcadaf98c1c6a7c6808fadf 422 Gene3D G3DSA:3.90.1150.10 18 387 8.3E-136 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_08035 da559f773dcadaf98c1c6a7c6808fadf 422 SUPERFAMILY SSF53383 8 392 5.21E-92 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_08035 da559f773dcadaf98c1c6a7c6808fadf 422 Gene3D G3DSA:3.40.640.10 29 290 8.3E-136 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 SUPERFAMILY SSF81271 389 455 1.09E-22 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 SUPERFAMILY SSF55021 653 724 4.23E-11 T 11-10-2018 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 SUPERFAMILY SSF109604 46 199 3.14E-41 T 11-10-2018 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 Gene3D G3DSA:3.30.460.10 201 333 1.2E-47 T 11-10-2018 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 Gene3D G3DSA:3.10.20.30 390 463 3.8E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 Pfam PF02824 TGS domain 396 455 1.1E-20 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 SMART SM00954 243 353 3.6E-63 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 Pfam PF13328 HD domain 45 183 4.9E-36 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 50 724 6.3E-184 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 Gene3D G3DSA:1.10.3210.10 46 199 1.2E-38 T 11-10-2018 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 SUPERFAMILY SSF81301 188 400 2.94E-62 T 11-10-2018 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 Pfam PF13291 ACT domain 648 724 1.5E-18 T 11-10-2018 IPR002912 ACT domain AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 Pfam PF04607 Region found in RelA / SpoT proteins 243 352 3.7E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AVL55_03395 08f18f4ff299ddcf89fafbdcc6b43abf 727 Gene3D G3DSA:3.30.70.260 648 727 1.1E-16 T 11-10-2018 AVL55_03520 ef6bef769b7ae7120384726ffe67d7fc 154 SUPERFAMILY SSF101738 1 109 6.28E-42 T 11-10-2018 IPR036760 SspB-like superfamily AVL55_03520 ef6bef769b7ae7120384726ffe67d7fc 154 PIRSF PIRSF005276 1 154 2.8E-51 T 11-10-2018 IPR007481 Stringent starvation protein B AVL55_03520 ef6bef769b7ae7120384726ffe67d7fc 154 Pfam PF04386 Stringent starvation protein B 4 154 2.9E-37 T 11-10-2018 IPR007481 Stringent starvation protein B AVL55_03520 ef6bef769b7ae7120384726ffe67d7fc 154 Gene3D G3DSA:2.30.30.220 1 123 4.3E-48 T 11-10-2018 IPR036760 SspB-like superfamily AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 SMART SM00729 147 367 2.4E-59 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 Gene3D G3DSA:3.80.30.20 145 377 6.1E-80 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.0E-202 T 11-10-2018 AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 SUPERFAMILY SSF102114 129 372 4.32E-61 T 11-10-2018 AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 Pfam PF01938 TRAM domain 379 440 2.7E-20 T 11-10-2018 IPR002792 TRAM domain AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 Gene3D G3DSA:3.40.50.12160 3 134 2.5E-34 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 9.1E-153 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 Pfam PF04055 Radical SAM superfamily 151 325 1.1E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.1E-30 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AVL55_07520 14b00881ecd8e99271bd8c087922f910 477 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 74.027 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AVL55_17435 01c207849856532e0696661da4cd2245 1569 SUPERFAMILY SSF52058 826 1102 3.23E-31 T 11-10-2018 AVL55_17435 01c207849856532e0696661da4cd2245 1569 SUPERFAMILY SSF49478 32 96 1.92E-9 T 11-10-2018 AVL55_17435 01c207849856532e0696661da4cd2245 1569 Pfam PF12799 Leucine Rich repeats (2 copies) 1063 1102 2.1E-8 T 11-10-2018 IPR025875 Leucine rich repeat 4 AVL55_17435 01c207849856532e0696661da4cd2245 1569 SUPERFAMILY SSF103647 1120 1154 2.09E-5 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AVL55_17435 01c207849856532e0696661da4cd2245 1569 Pfam PF13620 Carboxypeptidase regulatory-like domain 39 98 1.9E-9 T 11-10-2018 AVL55_17435 01c207849856532e0696661da4cd2245 1569 Gene3D G3DSA:2.60.40.10 26 100 1.6E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_17435 01c207849856532e0696661da4cd2245 1569 Gene3D G3DSA:3.80.10.10 806 983 3.6E-15 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AVL55_17435 01c207849856532e0696661da4cd2245 1569 SUPERFAMILY SSF69318 1326 1554 3.53E-8 T 11-10-2018 AVL55_17435 01c207849856532e0696661da4cd2245 1569 Gene3D G3DSA:3.80.10.10 984 1115 9.5E-21 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AVL55_17435 01c207849856532e0696661da4cd2245 1569 Gene3D G3DSA:4.10.1080.10 1116 1195 8.0E-6 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AVL55_17435 01c207849856532e0696661da4cd2245 1569 SUPERFAMILY SSF49464 118 172 1.06E-5 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AVL55_11680 b719c12d4b6cd63cb437ef78204401a3 413 Pfam PF00005 ABC transporter 20 138 6.0E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_11680 b719c12d4b6cd63cb437ef78204401a3 413 SMART SM00382 20 189 7.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_11680 b719c12d4b6cd63cb437ef78204401a3 413 SUPERFAMILY SSF52540 11 201 3.0E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11680 b719c12d4b6cd63cb437ef78204401a3 413 Gene3D G3DSA:3.40.50.300 3 209 1.3E-45 T 11-10-2018 AVL55_11680 b719c12d4b6cd63cb437ef78204401a3 413 ProSitePatterns PS00211 ABC transporters family signature. 112 126 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_16540 ceaf46e2ff4122a512843101f7f98d8e 272 SUPERFAMILY SSF52833 54 161 7.0E-6 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_16540 ceaf46e2ff4122a512843101f7f98d8e 272 Gene3D G3DSA:3.40.30.10 37 165 3.7E-13 T 11-10-2018 AVL55_16540 ceaf46e2ff4122a512843101f7f98d8e 272 Pfam PF13899 Thioredoxin-like 50 135 1.2E-9 T 11-10-2018 AVL55_17735 7c5161e581cff8a6a74595097f8f48fa 705 Gene3D G3DSA:2.170.130.10 21 149 4.7E-23 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_17735 7c5161e581cff8a6a74595097f8f48fa 705 Pfam PF00593 TonB dependent receptor 237 704 2.0E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_17735 7c5161e581cff8a6a74595097f8f48fa 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 144 4.0E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_17735 7c5161e581cff8a6a74595097f8f48fa 705 Gene3D G3DSA:2.40.170.20 160 705 8.6E-65 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_17735 7c5161e581cff8a6a74595097f8f48fa 705 SUPERFAMILY SSF56935 25 705 6.47E-91 T 11-10-2018 AVL55_03685 98d8cf6133a9da77e662d1eaa3c2dc6f 831 Pfam PF00326 Prolyl oligopeptidase family 636 831 4.7E-40 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_03685 98d8cf6133a9da77e662d1eaa3c2dc6f 831 Gene3D G3DSA:2.140.10.30 255 570 1.6E-25 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AVL55_03685 98d8cf6133a9da77e662d1eaa3c2dc6f 831 Gene3D G3DSA:3.40.50.1820 576 831 2.4E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_03685 98d8cf6133a9da77e662d1eaa3c2dc6f 831 SUPERFAMILY SSF53474 587 831 2.85E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_03685 98d8cf6133a9da77e662d1eaa3c2dc6f 831 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 383 543 6.4E-21 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AVL55_03685 98d8cf6133a9da77e662d1eaa3c2dc6f 831 SUPERFAMILY SSF82171 60 573 1.27E-35 T 11-10-2018 AVL55_04175 3b7dda02eb30879b0a6873367ee7812f 291 SUPERFAMILY SSF53067 3 111 1.3E-20 T 11-10-2018 AVL55_04175 3b7dda02eb30879b0a6873367ee7812f 291 SUPERFAMILY SSF53067 114 285 1.68E-36 T 11-10-2018 AVL55_04175 3b7dda02eb30879b0a6873367ee7812f 291 Gene3D G3DSA:3.30.420.40 5 114 3.9E-68 T 11-10-2018 AVL55_04175 3b7dda02eb30879b0a6873367ee7812f 291 Gene3D G3DSA:3.30.420.40 115 263 3.9E-68 T 11-10-2018 AVL55_04175 3b7dda02eb30879b0a6873367ee7812f 291 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 268 6.7E-19 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AVL55_10725 c9576511b8919689554ff8b898729355 155 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 PRINTS PR00601 Bacterioferritin signature 129 150 1.5E-47 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 PRINTS PR00601 Bacterioferritin signature 107 127 1.5E-47 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 PRINTS PR00601 Bacterioferritin signature 23 43 1.5E-47 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 PRINTS PR00601 Bacterioferritin signature 44 64 1.5E-47 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 PRINTS PR00601 Bacterioferritin signature 3 22 1.5E-47 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 PRINTS PR00601 Bacterioferritin signature 65 85 1.5E-47 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 PRINTS PR00601 Bacterioferritin signature 86 106 1.5E-47 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 SUPERFAMILY SSF47240 1 155 2.92E-45 T 11-10-2018 IPR009078 Ferritin-like superfamily AVL55_10725 c9576511b8919689554ff8b898729355 155 Pfam PF00210 Ferritin-like domain 8 144 3.8E-37 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 9.7E-49 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10725 c9576511b8919689554ff8b898729355 155 Gene3D G3DSA:1.20.1260.10 1 155 1.5E-59 T 11-10-2018 IPR012347 Ferritin-like AVL55_10725 c9576511b8919689554ff8b898729355 155 PIRSF PIRSF002560 1 155 1.7E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_08595 3131c2425a02cbbc47f1e6bda728d45d 303 SUPERFAMILY SSF53850 89 292 2.17E-30 T 11-10-2018 AVL55_08595 3131c2425a02cbbc47f1e6bda728d45d 303 Gene3D G3DSA:3.40.190.290 91 294 4.6E-33 T 11-10-2018 AVL55_08595 3131c2425a02cbbc47f1e6bda728d45d 303 Gene3D G3DSA:1.10.10.10 1 84 4.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_08595 3131c2425a02cbbc47f1e6bda728d45d 303 SUPERFAMILY SSF46785 1 85 2.73E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_08595 3131c2425a02cbbc47f1e6bda728d45d 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_08595 3131c2425a02cbbc47f1e6bda728d45d 303 Pfam PF03466 LysR substrate binding domain 88 289 4.8E-30 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_08595 3131c2425a02cbbc47f1e6bda728d45d 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_08595 3131c2425a02cbbc47f1e6bda728d45d 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_08595 3131c2425a02cbbc47f1e6bda728d45d 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_16460 09633e4e7472e2386f749d3c0260b60d 202 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 192 9.0E-16 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_16460 09633e4e7472e2386f749d3c0260b60d 202 Gene3D G3DSA:1.10.10.10 118 201 2.5E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16460 09633e4e7472e2386f749d3c0260b60d 202 SUPERFAMILY SSF88946 37 115 2.39E-8 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_16460 09633e4e7472e2386f749d3c0260b60d 202 SUPERFAMILY SSF88659 129 196 2.06E-8 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_16460 09633e4e7472e2386f749d3c0260b60d 202 Pfam PF04542 Sigma-70 region 2 50 109 2.9E-4 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_16460 09633e4e7472e2386f749d3c0260b60d 202 Pfam PF08281 Sigma-70, region 4 142 187 4.5E-6 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_11640 34945697395fe60051d2a7d0a00cf26f 352 Gene3D G3DSA:3.30.200.20 11 112 9.1E-35 T 11-10-2018 AVL55_11640 34945697395fe60051d2a7d0a00cf26f 352 SUPERFAMILY SSF56112 15 342 2.04E-61 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_11640 34945697395fe60051d2a7d0a00cf26f 352 Gene3D G3DSA:3.90.1200.10 113 352 1.6E-87 T 11-10-2018 AVL55_11640 34945697395fe60051d2a7d0a00cf26f 352 Pfam PF01636 Phosphotransferase enzyme family 35 259 4.0E-53 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AVL55_03375 5f26c753c717b6fd2a39e9f577777673 237 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 149 5.8E-29 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AVL55_03375 5f26c753c717b6fd2a39e9f577777673 237 SUPERFAMILY SSF57863 86 157 5.23E-7 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger AVL55_03375 5f26c753c717b6fd2a39e9f577777673 237 Gene3D G3DSA:2.40.50.140 3 77 3.2E-31 T 11-10-2018 AVL55_03375 5f26c753c717b6fd2a39e9f577777673 237 Pfam PF02565 Recombination protein O C terminal 84 230 1.4E-11 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AVL55_03375 5f26c753c717b6fd2a39e9f577777673 237 SUPERFAMILY SSF50249 3 77 6.17E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_03375 5f26c753c717b6fd2a39e9f577777673 237 Hamap MF_00201 DNA repair protein RecO [recO]. 2 235 18.694 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AVL55_03375 5f26c753c717b6fd2a39e9f577777673 237 Gene3D G3DSA:1.20.1440.120 80 236 1.3E-38 T 11-10-2018 AVL55_03375 5f26c753c717b6fd2a39e9f577777673 237 Pfam PF11967 Recombination protein O N terminal 1 78 7.9E-25 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AVL55_04135 e1a0185fff49687fa497efa47c09b746 322 Gene3D G3DSA:3.40.800.10 1 322 2.1E-100 T 11-10-2018 AVL55_04135 e1a0185fff49687fa497efa47c09b746 322 Hamap MF_00737 Formimidoylglutamase [hutG]. 3 316 37.297 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AVL55_04135 e1a0185fff49687fa497efa47c09b746 322 SUPERFAMILY SSF52768 4 316 1.67E-70 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AVL55_04135 e1a0185fff49687fa497efa47c09b746 322 Pfam PF00491 Arginase family 38 314 1.7E-51 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AVL55_04135 e1a0185fff49687fa497efa47c09b746 322 PIRSF PIRSF036979 16 321 1.8E-28 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AVL55_04135 e1a0185fff49687fa497efa47c09b746 322 TIGRFAM TIGR01227 hutG: formimidoylglutamase 4 315 1.9E-91 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AVL55_07040 105515ed2c7626b9c0c1e4af42935b43 374 PIRSF PIRSF001619 2 330 5.4E-138 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AVL55_07040 105515ed2c7626b9c0c1e4af42935b43 374 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 321 1.5E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AVL55_07040 105515ed2c7626b9c0c1e4af42935b43 374 Pfam PF04055 Radical SAM superfamily 61 214 1.8E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_07040 105515ed2c7626b9c0c1e4af42935b43 374 SMART SM00876 231 323 2.3E-46 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AVL55_07040 105515ed2c7626b9c0c1e4af42935b43 374 TIGRFAM TIGR00433 bioB: biotin synthase 26 321 1.2E-125 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AVL55_07040 105515ed2c7626b9c0c1e4af42935b43 374 Gene3D G3DSA:3.20.20.70 15 326 1.1E-131 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07040 105515ed2c7626b9c0c1e4af42935b43 374 SUPERFAMILY SSF102114 16 321 1.57E-92 T 11-10-2018 AVL55_07040 105515ed2c7626b9c0c1e4af42935b43 374 Hamap MF_01694 Biotin synthase [bioB]. 16 324 42.504 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AVL55_07040 105515ed2c7626b9c0c1e4af42935b43 374 SMART SM00729 54 266 1.9E-37 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AVL55_13405 ff5ee2649ad8988f09e80d67c9fd6906 273 SUPERFAMILY SSF51556 2 268 1.25E-60 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_13405 ff5ee2649ad8988f09e80d67c9fd6906 273 Gene3D G3DSA:3.20.20.140 1 268 2.2E-66 T 11-10-2018 AVL55_13405 ff5ee2649ad8988f09e80d67c9fd6906 273 PIRSF PIRSF005902 1 269 5.5E-54 T 11-10-2018 IPR001130 TatD family GO:0016788 AVL55_13405 ff5ee2649ad8988f09e80d67c9fd6906 273 Pfam PF01026 TatD related DNase 2 265 2.5E-53 T 11-10-2018 IPR001130 TatD family GO:0016788 AVL55_13405 ff5ee2649ad8988f09e80d67c9fd6906 273 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 1 9 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AVL55_06800 faf781f86fe77a3e171e09772327e624 146 Gene3D G3DSA:3.90.79.10 1 144 4.3E-36 T 11-10-2018 AVL55_06800 faf781f86fe77a3e171e09772327e624 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 5.5E-18 T 11-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AVL55_06800 faf781f86fe77a3e171e09772327e624 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 70 89 5.5E-18 T 11-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AVL55_06800 faf781f86fe77a3e171e09772327e624 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 98 119 5.5E-18 T 11-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AVL55_06800 faf781f86fe77a3e171e09772327e624 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 125 138 5.5E-18 T 11-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AVL55_06800 faf781f86fe77a3e171e09772327e624 146 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AVL55_06800 faf781f86fe77a3e171e09772327e624 146 Pfam PF00293 NUDIX domain 5 137 1.5E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AVL55_06800 faf781f86fe77a3e171e09772327e624 146 SUPERFAMILY SSF55811 3 141 6.23E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_00645 939b31db22dc4b009fbd9d0a0d40ca63 444 Gene3D G3DSA:1.20.1600.10 25 426 1.3E-39 T 11-10-2018 AVL55_00645 939b31db22dc4b009fbd9d0a0d40ca63 444 Pfam PF02321 Outer membrane efflux protein 43 220 3.7E-10 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_00645 939b31db22dc4b009fbd9d0a0d40ca63 444 Pfam PF02321 Outer membrane efflux protein 247 423 4.6E-9 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_00645 939b31db22dc4b009fbd9d0a0d40ca63 444 SUPERFAMILY SSF56954 17 425 3.66E-54 T 11-10-2018 AVL55_06350 ddc78ceeb209374010ec481e996652eb 351 Gene3D G3DSA:3.55.50.30 273 347 1.5E-8 T 11-10-2018 AVL55_06350 ddc78ceeb209374010ec481e996652eb 351 PIRSF PIRSF018266 5 347 4.1E-71 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AVL55_06350 ddc78ceeb209374010ec481e996652eb 351 Pfam PF16344 Domain of unknown function (DUF4974) 247 340 1.3E-10 T 11-10-2018 IPR032508 Protein FecR, C-terminal AVL55_06350 ddc78ceeb209374010ec481e996652eb 351 Pfam PF04773 FecR protein 124 216 1.5E-19 T 11-10-2018 IPR006860 FecR protein AVL55_06350 ddc78ceeb209374010ec481e996652eb 351 Gene3D G3DSA:2.60.120.1440 105 265 1.3E-27 T 11-10-2018 AVL55_07865 56d555188f765642f0276dcdf5d031ed 340 Gene3D G3DSA:3.60.15.10 64 325 3.6E-80 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_07865 56d555188f765642f0276dcdf5d031ed 340 Pfam PF12706 Beta-lactamase superfamily domain 89 284 8.4E-47 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_07865 56d555188f765642f0276dcdf5d031ed 340 PIRSF PIRSF038896 8 336 1.1E-93 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AVL55_07865 56d555188f765642f0276dcdf5d031ed 340 SUPERFAMILY SSF56281 74 302 8.26E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_12875 b068c52b9e9310e8101c56b9f1251270 164 PIRSF PIRSF006173 1 160 3.9E-52 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AVL55_12875 b068c52b9e9310e8101c56b9f1251270 164 Pfam PF03692 Putative zinc- or iron-chelating domain 23 103 5.9E-8 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AVL55_14840 3820077267a851eb65247d07ceb94cac 373 Pfam PF00107 Zinc-binding dehydrogenase 181 262 5.9E-8 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_14840 3820077267a851eb65247d07ceb94cac 373 Gene3D G3DSA:3.90.180.10 6 371 1.5E-150 T 11-10-2018 AVL55_14840 3820077267a851eb65247d07ceb94cac 373 SUPERFAMILY SSF51735 144 270 7.04E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_14840 3820077267a851eb65247d07ceb94cac 373 Gene3D G3DSA:3.40.50.720 150 337 1.5E-150 T 11-10-2018 AVL55_14840 3820077267a851eb65247d07ceb94cac 373 SUPERFAMILY SSF50129 16 182 2.98E-22 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.7E-87 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 SMART SM00363 96 160 2.1E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.97 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 Pfam PF01479 S4 domain 96 143 2.3E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 Gene3D G3DSA:3.10.290.10 95 191 1.8E-81 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 Gene3D G3DSA:1.10.1050.10 6 206 1.8E-81 T 11-10-2018 AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.4E-33 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 SUPERFAMILY SSF55174 3 206 1.7E-74 T 11-10-2018 AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17495 b02054c0e861081b087366f16f80f1ea 206 SMART SM01390 3 95 4.5E-52 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AVL55_00675 770da6973b88a496b2cc3f1ffc7ea021 223 Gene3D G3DSA:2.40.160.20 23 223 3.6E-69 T 11-10-2018 AVL55_00675 770da6973b88a496b2cc3f1ffc7ea021 223 SUPERFAMILY SSF56925 24 223 2.28E-28 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AVL55_00675 770da6973b88a496b2cc3f1ffc7ea021 223 Pfam PF03922 OmpW family 24 223 3.4E-56 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AVL55_01210 7c243fbc9d45b3044d1f70227a82c07a 250 SUPERFAMILY SSF47240 29 247 1.96E-33 T 11-10-2018 IPR009078 Ferritin-like superfamily AVL55_01210 7c243fbc9d45b3044d1f70227a82c07a 250 Gene3D G3DSA:1.20.1260.10 19 249 1.8E-52 T 11-10-2018 IPR012347 Ferritin-like AVL55_01210 7c243fbc9d45b3044d1f70227a82c07a 250 Pfam PF05138 Phenylacetic acid catabolic protein 27 245 4.3E-18 T 11-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 Pfam PF00512 His Kinase A (phospho-acceptor) domain 153 218 3.9E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 Gene3D G3DSA:3.30.565.10 221 374 8.6E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 SUPERFAMILY SSF55874 208 367 1.7E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 Gene3D G3DSA:3.30.450.20 39 140 1.4E-6 T 11-10-2018 AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 SUPERFAMILY SSF47384 143 218 7.46E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 SUPERFAMILY SSF55785 48 131 9.52E-9 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 SMART SM00387 262 368 3.0E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 SMART SM00388 153 219 1.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 Pfam PF13188 PAS domain 47 101 4.7E-6 T 11-10-2018 IPR000014 PAS domain AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 266 365 7.8E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 365 1.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 346 1.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 313 1.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 327 1.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_05105 1c1725179f052665250bd90b9e1238b4 380 Gene3D G3DSA:1.10.287.130 141 216 1.9E-13 T 11-10-2018 AVL55_16710 7f874b2f3edc6a64ee05fa1009cd401a 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_16710 7f874b2f3edc6a64ee05fa1009cd401a 198 Gene3D G3DSA:1.10.10.60 1 51 1.2E-22 T 11-10-2018 AVL55_16710 7f874b2f3edc6a64ee05fa1009cd401a 198 SUPERFAMILY SSF46689 10 68 2.88E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_16710 7f874b2f3edc6a64ee05fa1009cd401a 198 Gene3D G3DSA:1.10.357.10 52 197 6.1E-35 T 11-10-2018 AVL55_16710 7f874b2f3edc6a64ee05fa1009cd401a 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AVL55_17710 caa71f6db39a598665e4ba24e11d6638 186 SUPERFAMILY SSF52172 68 185 5.41E-27 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_17710 caa71f6db39a598665e4ba24e11d6638 186 SUPERFAMILY SSF46955 3 54 1.28E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_17710 caa71f6db39a598665e4ba24e11d6638 186 Pfam PF12728 Helix-turn-helix domain 4 54 5.1E-8 T 11-10-2018 AVL55_17710 caa71f6db39a598665e4ba24e11d6638 186 SMART SM00448 68 180 7.3E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17710 caa71f6db39a598665e4ba24e11d6638 186 Pfam PF00072 Response regulator receiver domain 70 180 7.8E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17710 caa71f6db39a598665e4ba24e11d6638 186 Gene3D G3DSA:3.40.50.2300 65 186 4.2E-26 T 11-10-2018 AVL55_17710 caa71f6db39a598665e4ba24e11d6638 186 Gene3D G3DSA:1.10.1660.10 2 53 1.7E-5 T 11-10-2018 AVL55_18795 cc833f91a8c28429f9dbae92dbfdf57f 257 Gene3D G3DSA:2.40.30.10 1 117 2.8E-26 T 11-10-2018 AVL55_18795 cc833f91a8c28429f9dbae92dbfdf57f 257 Pfam PF04954 Siderophore-interacting protein 125 235 2.6E-28 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AVL55_18795 cc833f91a8c28429f9dbae92dbfdf57f 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 11 117 1.0E-22 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AVL55_18795 cc833f91a8c28429f9dbae92dbfdf57f 257 Gene3D G3DSA:3.40.50.80 119 256 3.0E-40 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_18795 cc833f91a8c28429f9dbae92dbfdf57f 257 SUPERFAMILY SSF63380 4 115 2.51E-11 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_09465 2e090ed75551b684ac0f1e3e89328bd0 245 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 2 243 27.506 T 11-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AVL55_09465 2e090ed75551b684ac0f1e3e89328bd0 245 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 225 2.8E-36 T 11-10-2018 AVL55_12355 4f5d1034242821e281765b31386c16a9 135 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 5.5E-62 T 11-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 AVL55_12355 4f5d1034242821e281765b31386c16a9 135 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12355 4f5d1034242821e281765b31386c16a9 135 SMART SM00422 1 70 3.3E-26 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12355 4f5d1034242821e281765b31386c16a9 135 SUPERFAMILY SSF46955 1 119 5.49E-35 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_12355 4f5d1034242821e281765b31386c16a9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.3E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12355 4f5d1034242821e281765b31386c16a9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.3E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12355 4f5d1034242821e281765b31386c16a9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.3E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12355 4f5d1034242821e281765b31386c16a9 135 Pfam PF09278 MerR, DNA binding 47 108 5.3E-19 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AVL55_12355 4f5d1034242821e281765b31386c16a9 135 Gene3D G3DSA:1.10.1660.10 1 125 2.8E-33 T 11-10-2018 AVL55_17175 cb642d9ffae17e0c55ddf27386b27edb 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.5E-35 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted AVL55_17175 cb642d9ffae17e0c55ddf27386b27edb 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 5.1E-34 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted AVL55_09440 0e756ed497cb77dcabb35b40a68bdf59 200 Gene3D G3DSA:1.10.10.10 137 199 1.9E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_09440 0e756ed497cb77dcabb35b40a68bdf59 200 Pfam PF08281 Sigma-70, region 4 145 190 6.3E-8 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_09440 0e756ed497cb77dcabb35b40a68bdf59 200 Pfam PF04542 Sigma-70 region 2 53 106 5.6E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_09440 0e756ed497cb77dcabb35b40a68bdf59 200 SUPERFAMILY SSF88946 22 109 6.67E-18 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_09440 0e756ed497cb77dcabb35b40a68bdf59 200 SUPERFAMILY SSF88659 143 199 2.4E-10 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_09440 0e756ed497cb77dcabb35b40a68bdf59 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 197 3.2E-22 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_09440 0e756ed497cb77dcabb35b40a68bdf59 200 Gene3D G3DSA:1.10.1740.10 17 103 1.7E-16 T 11-10-2018 AVL55_00055 c1e914d7b615d92b1b61d90ea23831db 215 Pfam PF13489 Methyltransferase domain 80 202 3.9E-15 T 11-10-2018 AVL55_00055 c1e914d7b615d92b1b61d90ea23831db 215 SUPERFAMILY SSF53335 56 203 9.73E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_00055 c1e914d7b615d92b1b61d90ea23831db 215 Gene3D G3DSA:3.40.50.150 42 205 1.8E-9 T 11-10-2018 AVL55_05300 61247a2492c0d2fda763a6d472760e3c 807 SUPERFAMILY SSF56935 24 807 3.05E-77 T 11-10-2018 AVL55_05300 61247a2492c0d2fda763a6d472760e3c 807 Gene3D G3DSA:2.170.130.10 48 171 2.2E-12 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_05300 61247a2492c0d2fda763a6d472760e3c 807 Pfam PF00593 TonB dependent receptor 405 805 1.0E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_05300 61247a2492c0d2fda763a6d472760e3c 807 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 790 807 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AVL55_05300 61247a2492c0d2fda763a6d472760e3c 807 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 150 6.3E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_17550 5c0e1bfda0154ac4c82dde40dfdefd39 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.2E-27 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17550 5c0e1bfda0154ac4c82dde40dfdefd39 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.314 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AVL55_17550 5c0e1bfda0154ac4c82dde40dfdefd39 101 Gene3D G3DSA:4.10.830.10 41 101 7.2E-24 T 11-10-2018 AVL55_17550 5c0e1bfda0154ac4c82dde40dfdefd39 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17550 5c0e1bfda0154ac4c82dde40dfdefd39 101 SUPERFAMILY SSF57716 2 101 2.49E-39 T 11-10-2018 AVL55_12515 d76cf6434d0dd6c82d4decd0609b6f54 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 1.1E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AVL55_12515 d76cf6434d0dd6c82d4decd0609b6f54 337 Gene3D G3DSA:3.90.180.10 23 334 7.2E-98 T 11-10-2018 AVL55_12515 d76cf6434d0dd6c82d4decd0609b6f54 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 2.8E-156 T 11-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AVL55_12515 d76cf6434d0dd6c82d4decd0609b6f54 337 SMART SM00829 11 334 2.7E-10 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_12515 d76cf6434d0dd6c82d4decd0609b6f54 337 SUPERFAMILY SSF51735 117 285 1.17E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_12515 d76cf6434d0dd6c82d4decd0609b6f54 337 SUPERFAMILY SSF50129 12 144 2.28E-32 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_12515 d76cf6434d0dd6c82d4decd0609b6f54 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AVL55_12515 d76cf6434d0dd6c82d4decd0609b6f54 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 5.6E-20 T 11-10-2018 AVL55_12515 d76cf6434d0dd6c82d4decd0609b6f54 337 Gene3D G3DSA:3.40.50.720 128 273 7.2E-98 T 11-10-2018 AVL55_01865 c749f627b9d595da616b30cb72144fdd 388 SUPERFAMILY SSF109604 105 292 2.51E-20 T 11-10-2018 AVL55_01865 c749f627b9d595da616b30cb72144fdd 388 Gene3D G3DSA:1.10.3210.10 89 375 4.0E-30 T 11-10-2018 AVL55_01865 c749f627b9d595da616b30cb72144fdd 388 Pfam PF08668 HDOD domain 105 267 3.8E-13 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AVL55_03675 ed4301f9cc136f785ab63c5682f45ebd 286 SUPERFAMILY SSF52096 33 279 6.59E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_03675 ed4301f9cc136f785ab63c5682f45ebd 286 Gene3D G3DSA:3.90.226.10 23 227 2.5E-58 T 11-10-2018 AVL55_03675 ed4301f9cc136f785ab63c5682f45ebd 286 Gene3D G3DSA:1.10.12.10 229 283 2.5E-5 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AVL55_03675 ed4301f9cc136f785ab63c5682f45ebd 286 Pfam PF00378 Enoyl-CoA hydratase/isomerase 40 280 2.6E-45 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 SUPERFAMILY SSF52518 3 183 1.63E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 2.7E-45 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 1.0E-56 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 Gene3D G3DSA:3.40.50.970 365 565 2.3E-63 T 11-10-2018 AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 565 4.6E-259 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 Gene3D G3DSA:3.40.50.970 1 178 7.5E-70 T 11-10-2018 AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 Gene3D G3DSA:3.40.50.1220 189 360 4.6E-61 T 11-10-2018 AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 SUPERFAMILY SSF52467 189 362 3.27E-63 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 542 1.1E-47 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AVL55_02150 cf20ffbe8cc66d3c6455c7dcbf93fefb 572 SUPERFAMILY SSF52518 372 565 5.53E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_02820 ff811b76083badd4eb1c5f2aef7c8387 284 Gene3D G3DSA:1.20.120.350 7 121 1.6E-25 T 11-10-2018 IPR027359 Voltage-dependent channel domain superfamily AVL55_02820 ff811b76083badd4eb1c5f2aef7c8387 284 Pfam PF00520 Ion transport protein 16 234 3.2E-41 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AVL55_02820 ff811b76083badd4eb1c5f2aef7c8387 284 Gene3D G3DSA:1.10.287.70 122 233 1.2E-31 T 11-10-2018 AVL55_02820 ff811b76083badd4eb1c5f2aef7c8387 284 SUPERFAMILY SSF81324 17 232 1.49E-30 T 11-10-2018 AVL55_09370 d66893213ce27e5a816ec9023d71ade4 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 39.325 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AVL55_09370 d66893213ce27e5a816ec9023d71ade4 415 Gene3D G3DSA:3.40.605.10 10 411 2.6E-151 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_09370 d66893213ce27e5a816ec9023d71ade4 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 4.5E-134 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AVL55_09370 d66893213ce27e5a816ec9023d71ade4 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AVL55_09370 d66893213ce27e5a816ec9023d71ade4 415 PIRSF PIRSF000151 1 415 2.7E-164 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AVL55_09370 d66893213ce27e5a816ec9023d71ade4 415 Pfam PF00171 Aldehyde dehydrogenase family 6 282 1.6E-18 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AVL55_09370 d66893213ce27e5a816ec9023d71ade4 415 Gene3D G3DSA:3.40.309.10 224 372 2.6E-151 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AVL55_09370 d66893213ce27e5a816ec9023d71ade4 415 SUPERFAMILY SSF53720 4 414 2.09E-112 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 8.9E-63 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 Gene3D G3DSA:2.40.10.170 1 76 8.3E-27 T 11-10-2018 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 56.489 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 SUPERFAMILY SSF47917 346 460 4.45E-55 T 11-10-2018 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 SUPERFAMILY SSF50615 2 76 2.88E-23 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 SMART SM00382 143 328 0.0026 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_19995 da5e63863fc632162d30e341860b1aad 461 Gene3D G3DSA:3.40.50.300 77 345 4.4E-111 T 11-10-2018 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 74 1.0E-17 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 Gene3D G3DSA:1.10.1140.10 346 461 2.0E-59 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 3.3E-257 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AVL55_19995 da5e63863fc632162d30e341860b1aad 461 SUPERFAMILY SSF52540 79 349 3.44E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_19995 da5e63863fc632162d30e341860b1aad 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_17415 f31f278c778d166471c7b6b350360662 1592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 197 208 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AVL55_17415 f31f278c778d166471c7b6b350360662 1592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 240 250 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AVL55_17415 f31f278c778d166471c7b6b350360662 1592 Pfam PF00082 Subtilase family 192 455 3.1E-57 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AVL55_17415 f31f278c778d166471c7b6b350360662 1592 Gene3D G3DSA:3.40.50.200 159 467 2.6E-94 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_17415 f31f278c778d166471c7b6b350360662 1592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 236 249 1.4E-21 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_17415 f31f278c778d166471c7b6b350360662 1592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 406 422 1.4E-21 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_17415 f31f278c778d166471c7b6b350360662 1592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 192 211 1.4E-21 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_17415 f31f278c778d166471c7b6b350360662 1592 SUPERFAMILY SSF52743 168 465 1.44E-87 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_17415 f31f278c778d166471c7b6b350360662 1592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 407 417 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AVL55_17415 f31f278c778d166471c7b6b350360662 1592 SUPERFAMILY SSF69318 1290 1577 9.81E-9 T 11-10-2018 AVL55_00660 6db858be80be82a462a58f92497822c7 129 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_00660 6db858be80be82a462a58f92497822c7 129 SMART SM00422 1 70 7.3E-24 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_00660 6db858be80be82a462a58f92497822c7 129 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 126 4.8E-48 T 11-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 AVL55_00660 6db858be80be82a462a58f92497822c7 129 Gene3D G3DSA:1.10.1660.10 1 126 4.0E-33 T 11-10-2018 AVL55_00660 6db858be80be82a462a58f92497822c7 129 SUPERFAMILY SSF46955 1 126 2.64E-32 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_00660 6db858be80be82a462a58f92497822c7 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 9.8E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_00660 6db858be80be82a462a58f92497822c7 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 9.8E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_00660 6db858be80be82a462a58f92497822c7 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 9.8E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_00660 6db858be80be82a462a58f92497822c7 129 Pfam PF13411 MerR HTH family regulatory protein 1 69 1.5E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 Gene3D G3DSA:1.10.530.10 166 305 5.1E-43 T 11-10-2018 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 172 308 4.4E-21 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 PRINTS PR01002 Flagellar protein FlgJ signature 205 226 3.3E-29 T 11-10-2018 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 PRINTS PR01002 Flagellar protein FlgJ signature 185 203 3.3E-29 T 11-10-2018 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 PRINTS PR01002 Flagellar protein FlgJ signature 292 310 3.3E-29 T 11-10-2018 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 PRINTS PR01002 Flagellar protein FlgJ signature 227 248 3.3E-29 T 11-10-2018 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 PRINTS PR01002 Flagellar protein FlgJ signature 32 55 3.3E-29 T 11-10-2018 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 PRINTS PR01002 Flagellar protein FlgJ signature 249 270 3.3E-29 T 11-10-2018 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 Pfam PF10135 Rod binding protein 54 105 1.0E-16 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal AVL55_04890 71d48d985d90985f000f01e973c144f2 316 SMART SM00047 156 312 8.3E-33 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 16 309 3.3E-89 T 11-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AVL55_04890 71d48d985d90985f000f01e973c144f2 316 Gene3D G3DSA:2.10.70.40 200 252 5.1E-43 T 11-10-2018 AVL55_17080 838b51da15d443c04e37c8729e9c022b 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 4 107 1.8E-25 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AVL55_17080 838b51da15d443c04e37c8729e9c022b 206 SUPERFAMILY SSF54534 6 204 9.04E-57 T 11-10-2018 AVL55_17080 838b51da15d443c04e37c8729e9c022b 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 202 4.8E-28 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AVL55_17080 838b51da15d443c04e37c8729e9c022b 206 Gene3D G3DSA:3.10.50.40 67 205 3.7E-53 T 11-10-2018 AVL55_17080 838b51da15d443c04e37c8729e9c022b 206 Gene3D G3DSA:1.10.287.460 3 66 4.9E-20 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AVL55_14035 6fbcbfc7ebd84b1de6c5e0aefaee9f21 305 SUPERFAMILY SSF53448 2 214 1.06E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_14035 6fbcbfc7ebd84b1de6c5e0aefaee9f21 305 Gene3D G3DSA:3.90.550.10 1 190 8.2E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_14035 6fbcbfc7ebd84b1de6c5e0aefaee9f21 305 Pfam PF00535 Glycosyl transferase family 2 2 116 1.5E-13 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_02990 359abef1bf44631539a085676352a2f0 438 SUPERFAMILY SSF58104 236 435 8.63E-53 T 11-10-2018 AVL55_02990 359abef1bf44631539a085676352a2f0 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 35 131 2.8E-10 T 11-10-2018 IPR000014 PAS domain AVL55_02990 359abef1bf44631539a085676352a2f0 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 263 5.8E-14 T 11-10-2018 IPR000014 PAS domain AVL55_02990 359abef1bf44631539a085676352a2f0 438 SMART SM00283 230 435 1.4E-20 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_02990 359abef1bf44631539a085676352a2f0 438 Pfam PF13426 PAS domain 36 125 2.3E-6 T 11-10-2018 IPR000014 PAS domain AVL55_02990 359abef1bf44631539a085676352a2f0 438 Pfam PF13426 PAS domain 158 252 1.4E-11 T 11-10-2018 IPR000014 PAS domain AVL55_02990 359abef1bf44631539a085676352a2f0 438 SMART SM00086 95 137 340.0 T 11-10-2018 IPR001610 PAC motif AVL55_02990 359abef1bf44631539a085676352a2f0 438 SMART SM00086 217 259 0.018 T 11-10-2018 IPR001610 PAC motif AVL55_02990 359abef1bf44631539a085676352a2f0 438 Gene3D G3DSA:3.30.450.20 129 254 1.4E-19 T 11-10-2018 AVL55_02990 359abef1bf44631539a085676352a2f0 438 Gene3D G3DSA:3.30.450.20 7 128 7.6E-13 T 11-10-2018 AVL55_02990 359abef1bf44631539a085676352a2f0 438 SUPERFAMILY SSF55785 34 127 9.07E-14 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_02990 359abef1bf44631539a085676352a2f0 438 SMART SM00091 20 90 14.0 T 11-10-2018 IPR000014 PAS domain AVL55_02990 359abef1bf44631539a085676352a2f0 438 SMART SM00091 142 212 0.54 T 11-10-2018 IPR000014 PAS domain AVL55_02990 359abef1bf44631539a085676352a2f0 438 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 276 433 1.8E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_02990 359abef1bf44631539a085676352a2f0 438 Gene3D G3DSA:1.10.287.950 256 438 1.9E-43 T 11-10-2018 AVL55_02990 359abef1bf44631539a085676352a2f0 438 SUPERFAMILY SSF55785 155 259 4.54E-22 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_15975 3093684909d61a55cb67b401b2ae2fc8 233 Pfam PF03695 Uncharacterised protein family (UPF0149) 26 199 1.0E-9 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AVL55_05985 e7bb5022816d74ba504f00d5e06c2a15 558 SUPERFAMILY SSF52540 11 524 6.43E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05985 e7bb5022816d74ba504f00d5e06c2a15 558 Pfam PF13245 AAA domain 22 202 8.2E-22 T 11-10-2018 AVL55_05985 e7bb5022816d74ba504f00d5e06c2a15 558 Gene3D G3DSA:3.40.50.300 11 226 1.7E-40 T 11-10-2018 AVL55_05985 e7bb5022816d74ba504f00d5e06c2a15 558 Pfam PF13361 UvrD-like helicase C-terminal domain 444 522 1.1E-11 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AVL55_05985 e7bb5022816d74ba504f00d5e06c2a15 558 Pfam PF13361 UvrD-like helicase C-terminal domain 226 377 1.5E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AVL55_05985 e7bb5022816d74ba504f00d5e06c2a15 558 Gene3D G3DSA:3.40.50.300 228 526 5.8E-29 T 11-10-2018 AVL55_05985 e7bb5022816d74ba504f00d5e06c2a15 558 Gene3D G3DSA:1.10.486.10 333 462 5.8E-29 T 11-10-2018 AVL55_10945 c9e4e00ece35d5f699e45a145cffe390 241 Pfam PF02586 SOS response associated peptidase (SRAP) 85 217 9.9E-10 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) AVL55_10945 c9e4e00ece35d5f699e45a145cffe390 241 SUPERFAMILY SSF143081 33 193 1.57E-18 T 11-10-2018 IPR036590 SOS response associated peptidase-like AVL55_10945 c9e4e00ece35d5f699e45a145cffe390 241 Gene3D G3DSA:3.90.1680.10 25 226 5.8E-10 T 11-10-2018 IPR036590 SOS response associated peptidase-like AVL55_16470 3e55aa695c8a2a0859651b09cff169ab 836 Pfam PF07660 Secretin and TonB N terminus short domain 58 106 2.0E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AVL55_16470 3e55aa695c8a2a0859651b09cff169ab 836 Pfam PF00593 TonB dependent receptor 365 834 3.2E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_16470 3e55aa695c8a2a0859651b09cff169ab 836 Gene3D G3DSA:3.55.50.30 26 133 1.5E-15 T 11-10-2018 AVL55_16470 3e55aa695c8a2a0859651b09cff169ab 836 Gene3D G3DSA:2.40.170.20 134 836 1.4E-120 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_16470 3e55aa695c8a2a0859651b09cff169ab 836 SUPERFAMILY SSF56935 123 836 2.09E-114 T 11-10-2018 AVL55_16470 3e55aa695c8a2a0859651b09cff169ab 836 Pfam PF07715 TonB-dependent Receptor Plug Domain 139 249 1.9E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_16470 3e55aa695c8a2a0859651b09cff169ab 836 SMART SM00965 56 107 2.8E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AVL55_03490 9f199f32b0ccdd1d79d97de4892eea8f 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 9.8E-67 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_03490 9f199f32b0ccdd1d79d97de4892eea8f 142 PIRSF PIRSF002181 1 142 8.7E-53 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AVL55_03490 9f199f32b0ccdd1d79d97de4892eea8f 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AVL55_03490 9f199f32b0ccdd1d79d97de4892eea8f 142 Pfam PF00572 Ribosomal protein L13 15 138 3.4E-59 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AVL55_03490 9f199f32b0ccdd1d79d97de4892eea8f 142 SUPERFAMILY SSF52161 1 140 5.63E-62 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_03490 9f199f32b0ccdd1d79d97de4892eea8f 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.217 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AVL55_03490 9f199f32b0ccdd1d79d97de4892eea8f 142 Gene3D G3DSA:3.90.1180.10 1 142 2.3E-66 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 Gene3D G3DSA:3.30.930.10 2 243 6.4E-118 T 11-10-2018 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 Pfam PF02272 DHHA1 domain 723 861 1.0E-30 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.4E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 1.4E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 273 289 1.4E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 1.4E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 297 310 1.4E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 Pfam PF01411 tRNA synthetases class II (A) 8 544 7.7E-231 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 SUPERFAMILY SSF101353 247 454 1.22E-60 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 Gene3D G3DSA:3.30.54.20 614 667 4.9E-52 T 11-10-2018 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 844 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 SUPERFAMILY SSF55186 542 701 4.97E-53 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 865 200.77 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 643 686 1.1E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 SUPERFAMILY SSF50447 446 542 6.36E-17 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 SMART SM00863 643 686 5.6E-24 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 Gene3D G3DSA:3.10.310.40 754 862 5.4E-32 T 11-10-2018 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 Gene3D G3DSA:2.40.30.130 452 542 1.8E-12 T 11-10-2018 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 SUPERFAMILY SSF55681 4 246 6.71E-111 T 11-10-2018 AVL55_05325 eb513a2c99a0eea66c1eb7963f0fefc5 865 Gene3D G3DSA:3.30.980.10 552 687 4.9E-52 T 11-10-2018 AVL55_07010 cc664d2cc438e641d1abb975021542bb 322 Gene3D G3DSA:1.20.1420.30 35 309 1.2E-86 T 11-10-2018 AVL55_07010 cc664d2cc438e641d1abb975021542bb 322 Pfam PF01699 Sodium/calcium exchanger protein 6 144 7.5E-23 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AVL55_07010 cc664d2cc438e641d1abb975021542bb 322 Pfam PF01699 Sodium/calcium exchanger protein 174 317 3.2E-34 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AVL55_07010 cc664d2cc438e641d1abb975021542bb 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 312 4.3E-71 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AVL55_07010 cc664d2cc438e641d1abb975021542bb 322 Gene3D G3DSA:1.20.58.1130 9 205 1.2E-86 T 11-10-2018 AVL55_10245 1295453ef345ddbccde4cffb5c4c45a3 356 SUPERFAMILY SSF53335 75 273 1.36E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_10245 1295453ef345ddbccde4cffb5c4c45a3 356 Gene3D G3DSA:3.40.50.150 84 285 5.0E-23 T 11-10-2018 AVL55_10245 1295453ef345ddbccde4cffb5c4c45a3 356 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 109 123 4.7E-9 T 11-10-2018 AVL55_10245 1295453ef345ddbccde4cffb5c4c45a3 356 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 170 182 4.7E-9 T 11-10-2018 AVL55_10245 1295453ef345ddbccde4cffb5c4c45a3 356 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 206 4.7E-9 T 11-10-2018 AVL55_10245 1295453ef345ddbccde4cffb5c4c45a3 356 Pfam PF05175 Methyltransferase small domain 108 205 2.6E-5 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AVL55_11265 45661c2f7ea03f4d107879260df06be6 170 Gene3D G3DSA:3.40.30.10 36 168 2.5E-25 T 11-10-2018 AVL55_11265 45661c2f7ea03f4d107879260df06be6 170 Pfam PF00578 AhpC/TSA family 43 146 4.4E-10 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_11265 45661c2f7ea03f4d107879260df06be6 170 ProSitePatterns PS00194 Thioredoxin family active site. 59 77 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AVL55_11265 45661c2f7ea03f4d107879260df06be6 170 SUPERFAMILY SSF52833 40 164 1.23E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_16230 014ca004922917ca1b6e016c411fe0f1 135 Pfam PF10980 Protein of unknown function (DUF2787) 30 133 4.3E-39 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AVL55_16230 014ca004922917ca1b6e016c411fe0f1 135 Gene3D G3DSA:3.10.450.430 2 135 4.2E-44 T 11-10-2018 AVL55_09165 61dfa124275ea7c0678e6dd3defc7fe0 203 Pfam PF07681 DoxX 20 104 1.0E-20 T 11-10-2018 IPR032808 DoxX family AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 Pfam PF00072 Response regulator receiver domain 126 234 4.3E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 Pfam PF00072 Response regulator receiver domain 4 105 3.2E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 Gene3D G3DSA:3.40.50.2300 122 255 8.2E-32 T 11-10-2018 AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 408 3.3E-36 T 11-10-2018 IPR000160 GGDEF domain AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 404 1.6E-34 T 11-10-2018 IPR000160 GGDEF domain AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 Gene3D G3DSA:3.40.50.2300 1 121 2.9E-15 T 11-10-2018 AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 SUPERFAMILY SSF55073 260 409 3.77E-33 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 SMART SM00448 124 238 1.2E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 SMART SM00448 2 118 1.5E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 Gene3D G3DSA:3.30.70.270 256 416 7.3E-40 T 11-10-2018 AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 SMART SM00267 244 409 1.2E-41 T 11-10-2018 IPR000160 GGDEF domain AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 SUPERFAMILY SSF52172 125 257 3.13E-33 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_15755 ddbd0e0483c4d90ec65fc8c98e69467f 418 SUPERFAMILY SSF52172 1 109 6.69E-17 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 Gene3D G3DSA:3.40.50.150 235 437 1.7E-67 T 11-10-2018 AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 SUPERFAMILY SSF48013 11 153 1.7E-26 T 11-10-2018 IPR035926 NusB-like superfamily AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 Pfam PF01189 16S rRNA methyltransferase RsmB/F 244 434 4.8E-68 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 Gene3D G3DSA:3.30.70.1170 177 234 1.4E-11 T 11-10-2018 AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 18 437 3.5E-127 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 321 332 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 Pfam PF01029 NusB family 17 132 6.5E-17 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 Gene3D G3DSA:1.10.940.10 6 143 4.8E-36 T 11-10-2018 IPR035926 NusB-like superfamily AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 SUPERFAMILY SSF53335 143 436 1.41E-69 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 372 388 3.3E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 255 265 3.3E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 322 334 3.3E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 226 240 3.3E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AVL55_00090 3f96162de4dc84884ff7d5c8bcbff50a 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 419 436 3.3E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AVL55_13330 c979a31ac1fec1393a02628923d4bb4f 321 SUPERFAMILY SSF55326 3 136 2.44E-34 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AVL55_13330 c979a31ac1fec1393a02628923d4bb4f 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 135 1.2E-23 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AVL55_13330 c979a31ac1fec1393a02628923d4bb4f 321 SUPERFAMILY SSF56042 142 304 1.64E-41 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AVL55_13330 c979a31ac1fec1393a02628923d4bb4f 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 319 2.1E-110 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AVL55_13330 c979a31ac1fec1393a02628923d4bb4f 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 297 9.7E-10 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AVL55_13330 c979a31ac1fec1393a02628923d4bb4f 321 PIRSF PIRSF005303 1 320 1.2E-92 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AVL55_13330 c979a31ac1fec1393a02628923d4bb4f 321 Gene3D G3DSA:3.90.650.10 143 320 2.6E-54 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AVL55_13330 c979a31ac1fec1393a02628923d4bb4f 321 Gene3D G3DSA:3.30.1330.10 1 141 7.3E-46 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AVL55_13330 c979a31ac1fec1393a02628923d4bb4f 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 320 28.581 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.1E-155 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Gene3D G3DSA:3.90.199.10 33 520 1.7E-234 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.4E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 3.9E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 763 808 6.3E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.3E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 813 858 2.1E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 691 707 0.13 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 730 756 6.2E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 859 0.0 T 11-10-2018 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 SMART SM00434 11 498 1.0E-299 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Gene3D G3DSA:3.30.1360.40 236 332 1.7E-234 T 11-10-2018 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Gene3D G3DSA:1.10.268.10 369 492 1.7E-234 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 SUPERFAMILY SSF56719 30 520 5.36E-184 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Gene3D G3DSA:2.120.10.90 534 860 5.1E-125 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 860 24.658 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_11035 a01c01e0f4e54dfe70b8764c03caab93 904 SUPERFAMILY SSF101904 532 869 1.83E-107 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 75 227 1.1E-44 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 Gene3D G3DSA:3.10.290.10 2 60 2.2E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 SUPERFAMILY SSF55174 8 59 9.42E-14 T 11-10-2018 AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 Gene3D G3DSA:3.30.70.580 72 230 6.2E-54 T 11-10-2018 AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 Pfam PF00849 RNA pseudouridylate synthase 71 196 6.5E-15 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 Gene3D G3DSA:3.30.70.1560 136 209 6.2E-54 T 11-10-2018 AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 SUPERFAMILY SSF55120 68 232 8.63E-39 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 Pfam PF01479 S4 domain 8 52 1.4E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_08880 49b5c4e1f3e0c74f9e8495b8e7ac0c5a 252 SMART SM00363 7 64 2.1E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.1E-34 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 Gene3D G3DSA:3.10.150.10 248 366 2.5E-41 T 11-10-2018 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 SUPERFAMILY SSF55979 245 366 2.9E-38 T 11-10-2018 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 SUPERFAMILY SSF55979 1 118 7.39E-30 T 11-10-2018 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 7.0E-38 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 PIRSF PIRSF000804 1 366 7.7E-122 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 Gene3D G3DSA:3.10.150.10 1 123 4.6E-42 T 11-10-2018 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 SUPERFAMILY SSF55979 125 244 2.22E-29 T 11-10-2018 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.0E-112 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 Gene3D G3DSA:3.10.150.10 125 247 2.4E-36 T 11-10-2018 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.8E-41 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AVL55_00010 8cb1ed45be8d9ca66f6f6ff07db336b4 366 SMART SM00480 17 362 9.2E-152 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AVL55_09235 1a57456a5b57cfe79e1817a9a2169934 342 Gene3D G3DSA:1.10.8.60 142 211 9.8E-22 T 11-10-2018 AVL55_09235 1a57456a5b57cfe79e1817a9a2169934 342 Gene3D G3DSA:1.20.272.10 213 339 1.1E-30 T 11-10-2018 AVL55_09235 1a57456a5b57cfe79e1817a9a2169934 342 Gene3D G3DSA:3.40.50.300 1 139 8.4E-47 T 11-10-2018 AVL55_09235 1a57456a5b57cfe79e1817a9a2169934 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 5.3E-28 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AVL55_09235 1a57456a5b57cfe79e1817a9a2169934 342 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 2.4E-14 T 11-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_09235 1a57456a5b57cfe79e1817a9a2169934 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 327 1.4E-76 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AVL55_09235 1a57456a5b57cfe79e1817a9a2169934 342 SUPERFAMILY SSF48019 211 332 1.08E-26 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AVL55_09235 1a57456a5b57cfe79e1817a9a2169934 342 SUPERFAMILY SSF52540 1 209 4.46E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05195 2035e246b53d989ff25a3d4653d26b3e 469 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 345 5.0E-80 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AVL55_05195 2035e246b53d989ff25a3d4653d26b3e 469 Gene3D G3DSA:3.40.50.300 253 438 2.1E-58 T 11-10-2018 AVL55_05195 2035e246b53d989ff25a3d4653d26b3e 469 SUPERFAMILY SSF52540 259 447 1.39E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05195 2035e246b53d989ff25a3d4653d26b3e 469 SMART SM00382 256 394 4.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_05195 2035e246b53d989ff25a3d4653d26b3e 469 Pfam PF00448 SRP54-type protein, GTPase domain 260 447 1.3E-42 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_05195 2035e246b53d989ff25a3d4653d26b3e 469 SMART SM00962 257 450 3.1E-58 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AVL55_05195 2035e246b53d989ff25a3d4653d26b3e 469 Gene3D G3DSA:1.20.120.1380 231 441 2.1E-58 T 11-10-2018 AVL55_10015 54bb09b0d90d8f0375834621fe4d5635 395 SUPERFAMILY SSF52518 26 388 8.66E-112 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_10015 54bb09b0d90d8f0375834621fe4d5635 395 Gene3D G3DSA:3.40.50.970 4 392 8.0E-143 T 11-10-2018 AVL55_10015 54bb09b0d90d8f0375834621fe4d5635 395 Pfam PF00676 Dehydrogenase E1 component 58 350 7.0E-97 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AVL55_04200 e89419160eb9eec3bd2e44cb1b0eb121 309 Pfam PF13529 Peptidase_C39 like family 48 158 1.2E-7 T 11-10-2018 IPR039564 Peptidase C39-like AVL55_04200 e89419160eb9eec3bd2e44cb1b0eb121 309 Gene3D G3DSA:1.25.40.10 195 308 5.2E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_04200 e89419160eb9eec3bd2e44cb1b0eb121 309 Gene3D G3DSA:3.90.70.10 54 194 3.0E-14 T 11-10-2018 AVL55_04200 e89419160eb9eec3bd2e44cb1b0eb121 309 SUPERFAMILY SSF48452 200 304 5.69E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_05210 1c16a78db10d0e9bb120ddba764e3a50 127 Pfam PF00072 Response regulator receiver domain 7 119 7.0E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_05210 1c16a78db10d0e9bb120ddba764e3a50 127 SUPERFAMILY SSF52172 4 125 3.56E-38 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_05210 1c16a78db10d0e9bb120ddba764e3a50 127 Gene3D G3DSA:3.40.50.2300 1 126 7.6E-41 T 11-10-2018 AVL55_05210 1c16a78db10d0e9bb120ddba764e3a50 127 SMART SM00448 5 119 2.2E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_13305 333c37beb681e3ac387d0b8682971bdc 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 210 2.6E-23 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AVL55_13305 333c37beb681e3ac387d0b8682971bdc 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site AVL55_16045 05aee18fbf412183a097e2ba759a0c3f 282 Gene3D G3DSA:3.30.479.30 83 217 2.8E-8 T 11-10-2018 AVL55_16045 05aee18fbf412183a097e2ba759a0c3f 282 Pfam PF01145 SPFH domain / Band 7 family 53 225 2.4E-23 T 11-10-2018 IPR001107 Band 7 domain AVL55_16045 05aee18fbf412183a097e2ba759a0c3f 282 SMART SM00244 49 215 2.2E-9 T 11-10-2018 IPR001107 Band 7 domain AVL55_16045 05aee18fbf412183a097e2ba759a0c3f 282 SUPERFAMILY SSF117892 88 217 1.7E-12 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AVL55_11245 bc309e814d5c9556eb6ebd3523dd9f77 187 Gene3D G3DSA:3.30.70.260 89 174 4.5E-11 T 11-10-2018 AVL55_11245 bc309e814d5c9556eb6ebd3523dd9f77 187 PIRSF PIRSF028103 2 176 1.8E-38 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AVL55_11245 bc309e814d5c9556eb6ebd3523dd9f77 187 SUPERFAMILY SSF55021 92 170 9.51E-12 T 11-10-2018 AVL55_11245 bc309e814d5c9556eb6ebd3523dd9f77 187 SUPERFAMILY SSF55021 2 84 3.72E-14 T 11-10-2018 AVL55_11245 bc309e814d5c9556eb6ebd3523dd9f77 187 Pfam PF13740 ACT domain 4 78 6.2E-19 T 11-10-2018 AVL55_11245 bc309e814d5c9556eb6ebd3523dd9f77 187 Gene3D G3DSA:3.30.70.260 2 86 4.4E-18 T 11-10-2018 AVL55_11690 24a688945fff738be5b7b2ecab1f30f3 412 SUPERFAMILY SSF53850 82 333 8.8E-38 T 11-10-2018 AVL55_11690 24a688945fff738be5b7b2ecab1f30f3 412 Gene3D G3DSA:3.40.190.10 204 296 1.2E-20 T 11-10-2018 AVL55_11690 24a688945fff738be5b7b2ecab1f30f3 412 Pfam PF13531 Bacterial extracellular solute-binding protein 84 333 3.4E-30 T 11-10-2018 AVL55_11690 24a688945fff738be5b7b2ecab1f30f3 412 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 89 174 5.4E-20 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AVL55_11690 24a688945fff738be5b7b2ecab1f30f3 412 Gene3D G3DSA:3.40.190.10 80 203 1.6E-23 T 11-10-2018 AVL55_14165 34881a770b48b1b4d0960f07141a69ae 115 Pfam PF01541 GIY-YIG catalytic domain 21 93 1.9E-13 T 11-10-2018 IPR000305 GIY-YIG endonuclease AVL55_14165 34881a770b48b1b4d0960f07141a69ae 115 Gene3D G3DSA:3.40.1440.10 15 114 7.2E-23 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AVL55_14165 34881a770b48b1b4d0960f07141a69ae 115 SUPERFAMILY SSF82771 21 96 2.22E-8 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AVL55_14165 34881a770b48b1b4d0960f07141a69ae 115 SMART SM00465 20 100 0.0078 T 11-10-2018 IPR000305 GIY-YIG endonuclease AVL55_11450 fe8a7a0e093eb0c4f00fe411a4580d87 600 Gene3D G3DSA:1.10.540.10 17 158 3.8E-7 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AVL55_11450 fe8a7a0e093eb0c4f00fe411a4580d87 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 592 2.1E-25 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AVL55_11450 fe8a7a0e093eb0c4f00fe411a4580d87 600 SUPERFAMILY SSF47203 288 464 1.16E-39 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_11450 fe8a7a0e093eb0c4f00fe411a4580d87 600 Gene3D G3DSA:1.20.140.10 290 457 3.6E-40 T 11-10-2018 AVL55_11450 fe8a7a0e093eb0c4f00fe411a4580d87 600 SUPERFAMILY SSF56645 36 294 2.75E-46 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_11450 fe8a7a0e093eb0c4f00fe411a4580d87 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 2.0E-9 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AVL55_11450 fe8a7a0e093eb0c4f00fe411a4580d87 600 Gene3D G3DSA:2.40.110.10 160 289 1.9E-25 T 11-10-2018 AVL55_11450 fe8a7a0e093eb0c4f00fe411a4580d87 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 7.8E-16 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AVL55_11450 fe8a7a0e093eb0c4f00fe411a4580d87 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 452 3.2E-18 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_15405 cee55470f2e7707e2e27de5f3534c36f 370 SUPERFAMILY SSF52540 2 335 1.08E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15405 cee55470f2e7707e2e27de5f3534c36f 370 Gene3D G3DSA:3.40.50.300 100 354 8.1E-89 T 11-10-2018 AVL55_15405 cee55470f2e7707e2e27de5f3534c36f 370 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 343 5.7E-129 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AVL55_15405 cee55470f2e7707e2e27de5f3534c36f 370 SMART SM00382 121 246 2.2E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_15405 cee55470f2e7707e2e27de5f3534c36f 370 Gene3D G3DSA:3.30.450.90 1 98 1.9E-25 T 11-10-2018 AVL55_15405 cee55470f2e7707e2e27de5f3534c36f 370 Pfam PF00437 Type II/IV secretion system protein 11 268 4.8E-39 T 11-10-2018 IPR001482 Type II/IV secretion system protein AVL55_08670 da570c5828f1d56b38f3987763e935c6 321 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 321 3.1E-34 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AVL55_08670 da570c5828f1d56b38f3987763e935c6 321 Gene3D G3DSA:3.40.47.10 2 321 4.7E-120 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08670 da570c5828f1d56b38f3987763e935c6 321 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 321 66.132 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AVL55_08670 da570c5828f1d56b38f3987763e935c6 321 SUPERFAMILY SSF53901 3 321 9.66E-72 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08670 da570c5828f1d56b38f3987763e935c6 321 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 321 6.7E-134 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AVL55_08670 da570c5828f1d56b38f3987763e935c6 321 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 185 1.7E-28 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AVL55_03070 17549cffd43173bdbe7f70cb5da6822e 255 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 201 1.6E-40 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AVL55_03070 17549cffd43173bdbe7f70cb5da6822e 255 SUPERFAMILY SSF53639 16 222 3.14E-55 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AVL55_03070 17549cffd43173bdbe7f70cb5da6822e 255 SMART SM01007 22 201 2.3E-52 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AVL55_03070 17549cffd43173bdbe7f70cb5da6822e 255 Gene3D G3DSA:3.40.225.10 8 255 9.3E-67 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AVL55_19350 a688e0cdf9b3584fd125e3c395d4b6be 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 8 139 1.9E-49 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AVL55_19350 a688e0cdf9b3584fd125e3c395d4b6be 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19350 a688e0cdf9b3584fd125e3c395d4b6be 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 2.4E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19350 a688e0cdf9b3584fd125e3c395d4b6be 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 5.7E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19350 a688e0cdf9b3584fd125e3c395d4b6be 145 Gene3D G3DSA:3.30.700.10 23 138 9.2E-35 T 11-10-2018 AVL55_19350 a688e0cdf9b3584fd125e3c395d4b6be 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 1.9E-17 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AVL55_19350 a688e0cdf9b3584fd125e3c395d4b6be 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 1.9E-17 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AVL55_19350 a688e0cdf9b3584fd125e3c395d4b6be 145 SUPERFAMILY SSF54523 35 140 4.71E-37 T 11-10-2018 AVL55_19350 a688e0cdf9b3584fd125e3c395d4b6be 145 Pfam PF08334 Type II secretion system (T2SS), protein G 32 138 2.0E-35 T 11-10-2018 IPR013545 Type II secretion system protein G AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 SMART SM00387 687 798 2.6E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 SMART SM00448 817 931 4.3E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 SUPERFAMILY SSF47384 561 642 5.69E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 Gene3D G3DSA:3.40.50.12740 816 937 8.8E-34 T 11-10-2018 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 688 797 5.2E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 Gene3D G3DSA:3.30.565.10 639 804 3.7E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 SUPERFAMILY SSF103190 251 358 9.42E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 Gene3D G3DSA:3.30.450.20 202 355 2.8E-17 T 11-10-2018 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 Pfam PF02743 Cache domain 206 388 2.5E-14 T 11-10-2018 IPR033479 Double Cache domain 1 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 SUPERFAMILY SSF55874 629 800 2.75E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 758 776 1.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 751 1.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 737 1.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 782 795 1.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 Gene3D G3DSA:1.10.287.130 540 638 4.4E-26 T 11-10-2018 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 Pfam PF00512 His Kinase A (phospho-acceptor) domain 575 640 1.2E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 Pfam PF00072 Response regulator receiver domain 819 929 2.2E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 SMART SM00388 575 640 4.4E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_02225 846d284ac5ef4bccb68965ad0ac11167 938 SUPERFAMILY SSF52172 815 935 3.7E-31 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_15900 02b3c9f77a363746cf79e2722c598510 330 SUPERFAMILY SSF51735 115 296 4.79E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_15900 02b3c9f77a363746cf79e2722c598510 330 Gene3D G3DSA:3.40.50.720 58 322 1.3E-91 T 11-10-2018 AVL55_15900 02b3c9f77a363746cf79e2722c598510 330 Gene3D G3DSA:3.40.50.720 113 299 1.3E-91 T 11-10-2018 AVL55_15900 02b3c9f77a363746cf79e2722c598510 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 295 4.1E-46 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AVL55_09545 5ce197c3b443dbf5d205165f3fa31022 321 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 151 2.0E-22 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_09545 5ce197c3b443dbf5d205165f3fa31022 321 PIRSF PIRSF015753 5 317 8.7E-140 T 11-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 AVL55_09545 5ce197c3b443dbf5d205165f3fa31022 321 Pfam PF13410 Glutathione S-transferase, C-terminal domain 197 268 3.7E-12 T 11-10-2018 AVL55_09545 5ce197c3b443dbf5d205165f3fa31022 321 SUPERFAMILY SSF47616 172 317 2.23E-36 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_09545 5ce197c3b443dbf5d205165f3fa31022 321 Gene3D G3DSA:3.40.30.130 6 171 3.8E-65 T 11-10-2018 AVL55_09545 5ce197c3b443dbf5d205165f3fa31022 321 SUPERFAMILY SSF52833 33 154 4.38E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_09545 5ce197c3b443dbf5d205165f3fa31022 321 Gene3D G3DSA:1.20.1050.10 172 321 3.6E-72 T 11-10-2018 AVL55_00240 8114afded8ecb4c3213cea4a743c50d7 409 Gene3D G3DSA:3.40.50.1950 1 188 8.5E-62 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AVL55_00240 8114afded8ecb4c3213cea4a743c50d7 409 SUPERFAMILY SSF52507 4 177 9.03E-62 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AVL55_00240 8114afded8ecb4c3213cea4a743c50d7 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 193 375 2.2E-71 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AVL55_00240 8114afded8ecb4c3213cea4a743c50d7 409 SUPERFAMILY SSF102645 192 403 1.44E-77 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AVL55_00240 8114afded8ecb4c3213cea4a743c50d7 409 Pfam PF02441 Flavoprotein 6 178 2.7E-48 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AVL55_00240 8114afded8ecb4c3213cea4a743c50d7 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 399 6.2E-146 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AVL55_00240 8114afded8ecb4c3213cea4a743c50d7 409 Gene3D G3DSA:3.40.50.10300 189 409 2.5E-80 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AVL55_13620 8925db47105fa887ff8c2040fdcac974 392 SUPERFAMILY SSF55031 189 295 6.8E-23 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AVL55_13620 8925db47105fa887ff8c2040fdcac974 392 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 17 386 2.4E-119 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AVL55_13620 8925db47105fa887ff8c2040fdcac974 392 SUPERFAMILY SSF53187 21 386 2.36E-56 T 11-10-2018 AVL55_13620 8925db47105fa887ff8c2040fdcac974 392 Gene3D G3DSA:3.30.70.360 189 302 2.2E-109 T 11-10-2018 AVL55_13620 8925db47105fa887ff8c2040fdcac974 392 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 12 390 43.904 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AVL55_13620 8925db47105fa887ff8c2040fdcac974 392 Gene3D G3DSA:3.40.630.10 19 377 2.2E-109 T 11-10-2018 AVL55_13620 8925db47105fa887ff8c2040fdcac974 392 Pfam PF07687 Peptidase dimerisation domain 185 287 3.3E-20 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AVL55_13620 8925db47105fa887ff8c2040fdcac974 392 Pfam PF01546 Peptidase family M20/M25/M40 72 385 6.0E-38 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AVL55_14680 b35827d288a3bb09d2fc17267c1de29f 386 SUPERFAMILY SSF103473 17 382 3.79E-34 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_14680 b35827d288a3bb09d2fc17267c1de29f 386 Gene3D G3DSA:1.20.1250.20 13 193 1.1E-13 T 11-10-2018 AVL55_14680 b35827d288a3bb09d2fc17267c1de29f 386 Pfam PF07690 Major Facilitator Superfamily 18 343 5.2E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_14680 b35827d288a3bb09d2fc17267c1de29f 386 Gene3D G3DSA:1.20.1250.20 202 382 5.1E-9 T 11-10-2018 AVL55_16165 d3faaf2cd6f2524a81ea69bcae1b501e 411 SMART SM00388 209 274 2.2E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16165 d3faaf2cd6f2524a81ea69bcae1b501e 411 SUPERFAMILY SSF55874 279 402 1.64E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16165 d3faaf2cd6f2524a81ea69bcae1b501e 411 Gene3D G3DSA:1.10.287.130 154 274 1.5E-18 T 11-10-2018 AVL55_16165 d3faaf2cd6f2524a81ea69bcae1b501e 411 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 271 1.0E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16165 d3faaf2cd6f2524a81ea69bcae1b501e 411 SUPERFAMILY SSF47384 192 271 7.65E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_16165 d3faaf2cd6f2524a81ea69bcae1b501e 411 Gene3D G3DSA:3.30.565.10 275 406 4.2E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18350 edfb18ad23c7d88e8c057320c88667bc 422 SUPERFAMILY SSF103473 8 411 1.7E-54 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_18350 edfb18ad23c7d88e8c057320c88667bc 422 Pfam PF07690 Major Facilitator Superfamily 17 367 6.3E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_18350 edfb18ad23c7d88e8c057320c88667bc 422 Gene3D G3DSA:1.20.1250.20 204 405 4.8E-29 T 11-10-2018 AVL55_18350 edfb18ad23c7d88e8c057320c88667bc 422 Gene3D G3DSA:1.20.1250.20 10 197 8.7E-32 T 11-10-2018 AVL55_18350 edfb18ad23c7d88e8c057320c88667bc 422 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AVL55_08550 de2409137ec618304d0985a382867c6a 517 SUPERFAMILY SSF141868 273 513 5.1E-62 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_08550 de2409137ec618304d0985a382867c6a 517 Pfam PF12792 CSS motif domain associated with EAL 42 194 1.2E-20 T 11-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AVL55_08550 de2409137ec618304d0985a382867c6a 517 SMART SM00052 267 508 1.3E-60 T 11-10-2018 IPR001633 EAL domain AVL55_08550 de2409137ec618304d0985a382867c6a 517 Gene3D G3DSA:3.20.20.450 265 516 7.4E-65 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_08550 de2409137ec618304d0985a382867c6a 517 Pfam PF00563 EAL domain 274 503 5.1E-50 T 11-10-2018 IPR001633 EAL domain AVL55_15670 9ed7aaa92d5b82c8edc45cfd53cb8a65 113 Pfam PF02021 Uncharacterised protein family UPF0102 9 101 3.4E-25 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AVL55_15670 9ed7aaa92d5b82c8edc45cfd53cb8a65 113 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 111 1.5E-21 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AVL55_15670 9ed7aaa92d5b82c8edc45cfd53cb8a65 113 Gene3D G3DSA:3.40.1350.10 8 113 1.1E-26 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AVL55_15670 9ed7aaa92d5b82c8edc45cfd53cb8a65 113 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 113 18.161 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AVL55_15670 9ed7aaa92d5b82c8edc45cfd53cb8a65 113 SUPERFAMILY SSF52980 8 109 1.61E-21 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AVL55_15945 025a0031adcbae4743cf28dd67d5f00b 149 SUPERFAMILY SSF49503 22 147 9.93E-45 T 11-10-2018 IPR008972 Cupredoxin AVL55_15945 025a0031adcbae4743cf28dd67d5f00b 149 Gene3D G3DSA:2.60.40.420 21 148 8.4E-42 T 11-10-2018 IPR008972 Cupredoxin AVL55_15945 025a0031adcbae4743cf28dd67d5f00b 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 22 147 1.7E-27 T 11-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AVL55_15945 025a0031adcbae4743cf28dd67d5f00b 149 TIGRFAM TIGR02695 azurin: azurin 23 147 1.6E-59 T 11-10-2018 IPR014068 Azurin AVL55_15945 025a0031adcbae4743cf28dd67d5f00b 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 25 147 5.0E-41 T 11-10-2018 AVL55_13450 4dfdffbe11bdc833bbc06ad08b0756f4 192 Pfam PF08281 Sigma-70, region 4 135 181 4.3E-16 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_13450 4dfdffbe11bdc833bbc06ad08b0756f4 192 SUPERFAMILY SSF88659 124 186 3.55E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_13450 4dfdffbe11bdc833bbc06ad08b0756f4 192 Gene3D G3DSA:1.10.10.10 122 191 2.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_13450 4dfdffbe11bdc833bbc06ad08b0756f4 192 Gene3D G3DSA:1.10.1740.10 1 121 3.6E-44 T 11-10-2018 AVL55_13450 4dfdffbe11bdc833bbc06ad08b0756f4 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 3.2E-98 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_13450 4dfdffbe11bdc833bbc06ad08b0756f4 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 184 2.5E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_13450 4dfdffbe11bdc833bbc06ad08b0756f4 192 SUPERFAMILY SSF88946 2 108 1.04E-31 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_13450 4dfdffbe11bdc833bbc06ad08b0756f4 192 Pfam PF04542 Sigma-70 region 2 25 92 1.9E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 SMART SM00388 258 323 5.0E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 6.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 6.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 442 6.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 6.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 Gene3D G3DSA:1.10.8.500 199 246 8.9E-6 T 11-10-2018 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 Gene3D G3DSA:1.10.287.130 247 323 4.2E-24 T 11-10-2018 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 Pfam PF00072 Response regulator receiver domain 516 628 4.8E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 SUPERFAMILY SSF47384 244 323 7.46E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 SMART SM00304 198 250 9.4E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 SMART SM00448 514 628 2.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 Gene3D G3DSA:3.40.50.2300 494 637 2.1E-36 T 11-10-2018 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 Gene3D G3DSA:3.30.565.10 324 493 4.5E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 SUPERFAMILY SSF158472 200 248 2.75E-6 T 11-10-2018 AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 SUPERFAMILY SSF55874 312 484 4.32E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 486 6.5E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 SUPERFAMILY SSF52172 512 632 1.31E-32 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 SMART SM00387 370 489 1.3E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_18890 bcecaacf86264b22b94944e0cd6084bb 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 323 1.2E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_00940 ec91ad7de578b82b6b540888aef61b29 339 Pfam PF01263 Aldose 1-epimerase 19 336 1.0E-80 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AVL55_00940 ec91ad7de578b82b6b540888aef61b29 339 PIRSF PIRSF005096 1 339 2.1E-110 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AVL55_00940 ec91ad7de578b82b6b540888aef61b29 339 Gene3D G3DSA:2.70.98.10 8 339 4.3E-111 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AVL55_00940 ec91ad7de578b82b6b540888aef61b29 339 SUPERFAMILY SSF74650 5 338 8.79E-103 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AVL55_14095 e30d694d1f8d86f5c033a5ad7ee98b93 253 Gene3D G3DSA:3.40.50.300 51 241 7.9E-6 T 11-10-2018 AVL55_14095 e30d694d1f8d86f5c033a5ad7ee98b93 253 Pfam PF03567 Sulfotransferase family 57 228 2.7E-12 T 11-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 AVL55_14095 e30d694d1f8d86f5c033a5ad7ee98b93 253 SUPERFAMILY SSF52540 53 242 4.09E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18860 b66648afc2ecfeea86e8fce9908835e3 689 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 154 1.7E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_18860 b66648afc2ecfeea86e8fce9908835e3 689 Gene3D G3DSA:2.170.130.10 25 159 1.8E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_18860 b66648afc2ecfeea86e8fce9908835e3 689 Gene3D G3DSA:2.40.170.20 182 688 4.4E-67 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_18860 b66648afc2ecfeea86e8fce9908835e3 689 Pfam PF00593 TonB dependent receptor 190 688 7.2E-45 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_18860 b66648afc2ecfeea86e8fce9908835e3 689 SUPERFAMILY SSF56935 20 688 1.03E-94 T 11-10-2018 AVL55_06525 6e2ea57c5828ce92c2ab5f62b8b65df3 501 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 5 496 3.9E-207 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AVL55_06525 6e2ea57c5828ce92c2ab5f62b8b65df3 501 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AVL55_06525 6e2ea57c5828ce92c2ab5f62b8b65df3 501 Pfam PF00474 Sodium:solute symporter family 34 437 7.9E-101 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_06525 6e2ea57c5828ce92c2ab5f62b8b65df3 501 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 437 6.7E-90 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_06525 6e2ea57c5828ce92c2ab5f62b8b65df3 501 Gene3D G3DSA:1.20.1730.10 5 497 6.7E-91 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 SUPERFAMILY SSF49478 29 88 3.73E-7 T 11-10-2018 AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 SUPERFAMILY SSF52058 840 928 1.81E-9 T 11-10-2018 AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 Pfam PF13620 Carboxypeptidase regulatory-like domain 118 177 4.0E-8 T 11-10-2018 AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 Pfam PF13620 Carboxypeptidase regulatory-like domain 492 554 3.2E-8 T 11-10-2018 AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 Gene3D G3DSA:3.80.10.10 953 1191 2.5E-26 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 SUPERFAMILY SSF49464 118 196 2.9E-6 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 SUPERFAMILY SSF52058 907 1195 3.15E-30 T 11-10-2018 AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 SUPERFAMILY SSF103647 686 753 9.94E-7 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 SUPERFAMILY SSF69318 1263 1555 6.47E-13 T 11-10-2018 AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 SUPERFAMILY SSF49464 493 547 1.06E-6 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 Gene3D G3DSA:2.60.40.10 22 101 4.6E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 Gene3D G3DSA:3.80.10.10 815 952 2.4E-16 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AVL55_17410 1830d24b301473033f4bc54e4f8095f5 1680 Gene3D G3DSA:2.60.40.1120 492 580 3.2E-5 T 11-10-2018 AVL55_04210 64c6c1de582d1f1b4a2080e876dc6b53 191 Gene3D G3DSA:2.40.160.20 22 166 3.2E-8 T 11-10-2018 AVL55_04210 64c6c1de582d1f1b4a2080e876dc6b53 191 SUPERFAMILY SSF56925 29 191 3.49E-11 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AVL55_04210 64c6c1de582d1f1b4a2080e876dc6b53 191 Pfam PF13505 Outer membrane protein beta-barrel domain 10 174 2.6E-11 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AVL55_09710 748fb4cde7c6f47b516457d037c5727d 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 7.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_09710 748fb4cde7c6f47b516457d037c5727d 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 7.6E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_09710 748fb4cde7c6f47b516457d037c5727d 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 1.4E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_09710 748fb4cde7c6f47b516457d037c5727d 207 SUPERFAMILY SSF48498 81 205 4.0E-40 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AVL55_09710 748fb4cde7c6f47b516457d037c5727d 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AVL55_09710 748fb4cde7c6f47b516457d037c5727d 207 Gene3D G3DSA:1.10.357.10 2 207 9.7E-61 T 11-10-2018 AVL55_09710 748fb4cde7c6f47b516457d037c5727d 207 SUPERFAMILY SSF46689 3 77 9.23E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_09515 456506690fde57aed8dc8353dd60b7da 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 43.13 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AVL55_09515 456506690fde57aed8dc8353dd60b7da 249 Pfam PF02348 Cytidylyltransferase 5 222 1.4E-61 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AVL55_09515 456506690fde57aed8dc8353dd60b7da 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 242 3.4E-99 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AVL55_09515 456506690fde57aed8dc8353dd60b7da 249 Gene3D G3DSA:3.90.550.10 1 249 1.9E-88 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_09515 456506690fde57aed8dc8353dd60b7da 249 SUPERFAMILY SSF53448 3 244 2.7E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_07305 8fbc60764543f569831565f9660d30ed 197 SUPERFAMILY SSF46785 4 86 2.02E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_07305 8fbc60764543f569831565f9660d30ed 197 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 171 9.7E-53 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AVL55_07305 8fbc60764543f569831565f9660d30ed 197 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 9 176 3.1E-33 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AVL55_07305 8fbc60764543f569831565f9660d30ed 197 Gene3D G3DSA:1.10.10.10 86 183 1.9E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_07305 8fbc60764543f569831565f9660d30ed 197 Gene3D G3DSA:1.10.10.10 3 85 7.9E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_07305 8fbc60764543f569831565f9660d30ed 197 PIRSF PIRSF019345 1 194 1.5E-60 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AVL55_07305 8fbc60764543f569831565f9660d30ed 197 SUPERFAMILY SSF46785 89 162 1.7E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_14810 64057c8f583392b8daf2e84342ca930e 721 SUPERFAMILY SSF55486 51 713 4.81E-180 T 11-10-2018 AVL55_14810 64057c8f583392b8daf2e84342ca930e 721 Pfam PF01432 Peptidase family M3 268 713 3.9E-134 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AVL55_14810 64057c8f583392b8daf2e84342ca930e 721 Gene3D G3DSA:1.10.1370.10 184 648 9.4E-242 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AVL55_14810 64057c8f583392b8daf2e84342ca930e 721 Gene3D G3DSA:1.10.1370.40 73 710 9.4E-242 T 11-10-2018 AVL55_08460 1d51fbeac533ea50e8fbc0934c7ec90a 355 SUPERFAMILY SSF56235 47 353 1.08E-92 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_08460 1d51fbeac533ea50e8fbc0934c7ec90a 355 Gene3D G3DSA:3.60.20.30 221 355 3.3E-50 T 11-10-2018 AVL55_08460 1d51fbeac533ea50e8fbc0934c7ec90a 355 Pfam PF01112 Asparaginase 48 353 5.2E-113 T 11-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 Gene3D G3DSA:3.30.2090.10 182 272 1.4E-252 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 SUPERFAMILY SSF82693 48 139 1.52E-15 T 11-10-2018 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 PRINTS PR00702 Acriflavin resistance protein family signature 18 42 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 SUPERFAMILY SSF82866 794 1020 4.58E-47 T 11-10-2018 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 SUPERFAMILY SSF82714 721 795 1.16E-8 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 Gene3D G3DSA:3.30.70.1430 561 660 1.4E-252 T 11-10-2018 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 Pfam PF00873 AcrB/AcrD/AcrF family 12 1018 2.8E-156 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 Gene3D G3DSA:1.20.1640.10 18 503 1.4E-252 T 11-10-2018 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 Gene3D G3DSA:1.20.1640.10 504 1015 1.4E-252 T 11-10-2018 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 Gene3D G3DSA:3.30.70.1430 48 805 1.4E-252 T 11-10-2018 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 Gene3D G3DSA:3.30.70.1440 661 858 1.4E-252 T 11-10-2018 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 Gene3D G3DSA:3.30.2090.10 710 797 1.4E-252 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 SUPERFAMILY SSF82714 187 268 1.44E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 SUPERFAMILY SSF82866 295 490 3.66E-38 T 11-10-2018 AVL55_06965 f134befa383db51f66c10e5bc5a6af3b 1059 Gene3D G3DSA:3.30.70.1320 141 329 1.4E-252 T 11-10-2018 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 SUPERFAMILY SSF51735 1 112 5.66E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_02805 05b2582c571da815cf8df65c084f5619 460 SUPERFAMILY SSF75615 114 208 1.44E-22 T 11-10-2018 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 Gene3D G3DSA:3.30.160.110 113 148 4.9E-17 T 11-10-2018 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 Hamap MF_01646 Siroheme synthase [cysG]. 1 460 49.55 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 Gene3D G3DSA:3.30.950.10 334 460 6.9E-49 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 218 453 2.3E-96 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 220 428 8.0E-52 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 Gene3D G3DSA:3.40.50.720 1 112 1.6E-34 T 11-10-2018 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 298 331 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 PIRSF PIRSF036426 1 460 2.9E-192 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 Gene3D G3DSA:1.10.8.210 149 208 1.6E-6 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 Pfam PF13241 Putative NAD(P)-binding 6 115 1.1E-27 T 11-10-2018 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 SUPERFAMILY SSF53790 216 459 6.54E-84 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 Gene3D G3DSA:3.40.1010.10 209 333 1.0E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 5.6E-18 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AVL55_02805 05b2582c571da815cf8df65c084f5619 460 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 2.2E-64 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AVL55_20045 0097b847ac8f317bfb7b1aa68eb6fcec 211 PIRSF PIRSF003078 4 211 7.4E-63 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AVL55_20045 0097b847ac8f317bfb7b1aa68eb6fcec 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 210 2.5E-57 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AVL55_20045 0097b847ac8f317bfb7b1aa68eb6fcec 211 Gene3D G3DSA:3.40.50.150 9 211 9.5E-71 T 11-10-2018 AVL55_20045 0097b847ac8f317bfb7b1aa68eb6fcec 211 Pfam PF02527 rRNA small subunit methyltransferase G 26 206 2.7E-62 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AVL55_20045 0097b847ac8f317bfb7b1aa68eb6fcec 211 SUPERFAMILY SSF53335 10 210 1.01E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_20045 0097b847ac8f317bfb7b1aa68eb6fcec 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 19 207 28.061 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AVL55_16985 fab567f321ab7a0f5df61337653dc787 79 Pfam PF09905 DNA-binding protein VF530 5 67 1.8E-35 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AVL55_16985 fab567f321ab7a0f5df61337653dc787 79 Gene3D G3DSA:1.10.720.30 13 71 9.4E-31 T 11-10-2018 IPR036361 SAP domain superfamily AVL55_00275 09de6254121640785b517234e6668121 51 Pfam PF00471 Ribosomal protein L33 4 49 3.8E-18 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_00275 09de6254121640785b517234e6668121 51 Gene3D G3DSA:2.20.28.120 1 51 8.9E-29 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_00275 09de6254121640785b517234e6668121 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_00275 09de6254121640785b517234e6668121 51 SUPERFAMILY SSF57829 1 49 2.2E-19 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AVL55_00275 09de6254121640785b517234e6668121 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.977 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_00275 09de6254121640785b517234e6668121 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 1.1E-23 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 Gene3D G3DSA:1.10.540.10 10 159 4.3E-17 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 SUPERFAMILY SSF47203 286 474 4.03E-48 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 466 592 1.3E-34 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 157 7.2E-13 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 7.3E-15 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 Gene3D G3DSA:1.20.140.10 287 460 2.9E-42 T 11-10-2018 AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 SUPERFAMILY SSF56645 39 278 3.01E-56 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 Gene3D G3DSA:2.40.110.10 160 286 6.1E-28 T 11-10-2018 AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 447 4.1E-18 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_08775 0728383d13b41de5dfd5f47cd2158987 599 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 2.2E-5 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AVL55_12600 5251c8f5331c0b4c1c5d57e4fe89f0db 229 SMART SM00100 13 134 3.3E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AVL55_12600 5251c8f5331c0b4c1c5d57e4fe89f0db 229 Gene3D G3DSA:2.60.120.10 5 142 1.1E-28 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_12600 5251c8f5331c0b4c1c5d57e4fe89f0db 229 SUPERFAMILY SSF51206 7 141 1.83E-32 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AVL55_12600 5251c8f5331c0b4c1c5d57e4fe89f0db 229 Pfam PF00027 Cyclic nucleotide-binding domain 32 119 3.3E-18 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AVL55_12600 5251c8f5331c0b4c1c5d57e4fe89f0db 229 SUPERFAMILY SSF46785 150 228 1.01E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_12600 5251c8f5331c0b4c1c5d57e4fe89f0db 229 Pfam PF13545 Crp-like helix-turn-helix domain 153 222 4.2E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AVL55_12600 5251c8f5331c0b4c1c5d57e4fe89f0db 229 Gene3D G3DSA:1.10.10.10 149 225 1.2E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_12600 5251c8f5331c0b4c1c5d57e4fe89f0db 229 SMART SM00419 170 218 1.6E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AVL55_11685 5b0f63408729b21fcdcebe0cea81ad27 231 SUPERFAMILY SSF161098 7 221 1.31E-43 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_11685 5b0f63408729b21fcdcebe0cea81ad27 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 16 221 1.7E-65 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AVL55_11685 5b0f63408729b21fcdcebe0cea81ad27 231 Gene3D G3DSA:1.10.3720.10 1 226 1.4E-48 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_11685 5b0f63408729b21fcdcebe0cea81ad27 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 2.7E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_16480 014a612610a25ea4c8442dcc82d1892d 299 Gene3D G3DSA:3.40.190.10 90 288 6.3E-58 T 11-10-2018 AVL55_16480 014a612610a25ea4c8442dcc82d1892d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.6E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_16480 014a612610a25ea4c8442dcc82d1892d 299 Pfam PF03466 LysR substrate binding domain 87 291 4.9E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_16480 014a612610a25ea4c8442dcc82d1892d 299 SUPERFAMILY SSF46785 4 87 6.3E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_16480 014a612610a25ea4c8442dcc82d1892d 299 Gene3D G3DSA:3.40.190.10 162 263 6.3E-58 T 11-10-2018 AVL55_16480 014a612610a25ea4c8442dcc82d1892d 299 SUPERFAMILY SSF53850 88 292 2.9E-42 T 11-10-2018 AVL55_16480 014a612610a25ea4c8442dcc82d1892d 299 Gene3D G3DSA:1.10.10.10 1 88 2.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_01080 69a05c00febf1b73cfa8705aa7937b72 196 PIRSF PIRSF006305 1 195 2.8E-51 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AVL55_01080 69a05c00febf1b73cfa8705aa7937b72 196 Gene3D G3DSA:3.90.950.10 1 196 6.8E-65 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AVL55_01080 69a05c00febf1b73cfa8705aa7937b72 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 189 1.1E-51 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AVL55_01080 69a05c00febf1b73cfa8705aa7937b72 196 Pfam PF02545 Maf-like protein 5 191 4.5E-55 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AVL55_01080 69a05c00febf1b73cfa8705aa7937b72 196 Hamap MF_00528 Septum formation protein Maf [maf]. 4 196 31.189 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AVL55_01080 69a05c00febf1b73cfa8705aa7937b72 196 SUPERFAMILY SSF52972 2 191 1.05E-58 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 Gene3D G3DSA:1.10.287.130 187 306 6.3E-15 T 11-10-2018 AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 458 6.5E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 SMART SM00388 243 311 1.5E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 306 8.9E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 Gene3D G3DSA:3.30.565.10 317 465 2.4E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.5E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.5E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.5E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 SUPERFAMILY SSF47384 230 305 2.35E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 SUPERFAMILY SSF55874 315 460 5.24E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_06770 1e77e69f3aff3a177c42401671aac6d9 465 SMART SM00387 352 464 2.2E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Gene3D G3DSA:2.40.50.100 1137 1200 1.2E-63 T 11-10-2018 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1025 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.0E-19 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 SMART SM00663 235 514 1.7E-182 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Gene3D G3DSA:1.10.132.30 641 790 1.4E-66 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Gene3D G3DSA:2.40.50.100 1023 1112 1.7E-10 T 11-10-2018 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Gene3D G3DSA:1.10.1790.20 1121 1299 1.2E-63 T 11-10-2018 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 4.1E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 383 1.7E-7 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Gene3D G3DSA:1.10.274.100 490 640 9.7E-41 T 11-10-2018 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1301 6.4E-78 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Gene3D G3DSA:1.10.40.90 374 416 1.9E-21 T 11-10-2018 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 SUPERFAMILY SSF64484 16 1356 0.0 T 11-10-2018 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-29 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Gene3D G3DSA:1.10.150.390 1301 1363 9.1E-29 T 11-10-2018 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 6.6E-87 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Gene3D G3DSA:2.40.50.100 948 1022 8.4E-28 T 11-10-2018 AVL55_18235 5dfaacfaa3420149c2f096205b192f18 1390 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1361 18.988 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_19570 a7b1a47d8b71c51ce2dbc723003de13f 214 Pfam PF02630 SCO1/SenC 42 186 6.1E-32 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19570 a7b1a47d8b71c51ce2dbc723003de13f 214 SUPERFAMILY SSF52833 43 195 1.44E-43 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_19570 a7b1a47d8b71c51ce2dbc723003de13f 214 Gene3D G3DSA:3.40.30.10 30 207 7.7E-43 T 11-10-2018 AVL55_08355 8733e24ad0672e4598493b7380af93c5 281 Pfam PF08668 HDOD domain 15 205 1.7E-50 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AVL55_08355 8733e24ad0672e4598493b7380af93c5 281 SUPERFAMILY SSF109604 3 259 5.1E-56 T 11-10-2018 AVL55_08355 8733e24ad0672e4598493b7380af93c5 281 Gene3D G3DSA:1.10.3210.10 1 269 2.0E-59 T 11-10-2018 AVL55_11490 a33ad27f46f275820f1ae1ad6d8cccc5 308 PIRSF PIRSF000089 1 308 4.7E-108 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AVL55_11490 a33ad27f46f275820f1ae1ad6d8cccc5 308 SUPERFAMILY SSF52467 188 306 3.23E-48 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AVL55_11490 a33ad27f46f275820f1ae1ad6d8cccc5 308 SUPERFAMILY SSF52402 2 183 1.05E-58 T 11-10-2018 AVL55_11490 a33ad27f46f275820f1ae1ad6d8cccc5 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 2.9E-36 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AVL55_11490 a33ad27f46f275820f1ae1ad6d8cccc5 308 Gene3D G3DSA:3.40.50.620 2 182 8.6E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_11490 a33ad27f46f275820f1ae1ad6d8cccc5 308 Pfam PF01012 Electron transfer flavoprotein domain 3 168 3.2E-40 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AVL55_11490 a33ad27f46f275820f1ae1ad6d8cccc5 308 Gene3D G3DSA:3.40.50.1220 183 308 3.9E-58 T 11-10-2018 AVL55_11490 a33ad27f46f275820f1ae1ad6d8cccc5 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AVL55_11490 a33ad27f46f275820f1ae1ad6d8cccc5 308 SMART SM00893 3 181 2.6E-54 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 Pfam PF13181 Tetratricopeptide repeat 105 134 0.073 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 Pfam PF13432 Tetratricopeptide repeat 358 416 4.1E-4 T 11-10-2018 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 SMART SM00028 141 174 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 SMART SM00028 353 386 500.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 SMART SM00028 389 422 77.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 SMART SM00028 103 136 0.076 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 Gene3D G3DSA:1.25.40.10 178 440 2.7E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 SUPERFAMILY SSF48452 101 206 1.52E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 SUPERFAMILY SSF81901 184 425 1.46E-8 T 11-10-2018 AVL55_03245 8fa84d56e7e3eddbce59ee00e54c3bca 449 Gene3D G3DSA:1.25.40.10 31 175 2.6E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_09960 e24f01d277229ee9a4191f958aee6167 235 Gene3D G3DSA:3.40.1080.10 2 228 1.5E-95 T 11-10-2018 AVL55_09960 e24f01d277229ee9a4191f958aee6167 235 Pfam PF01144 Coenzyme A transferase 10 218 1.6E-71 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AVL55_09960 e24f01d277229ee9a4191f958aee6167 235 SUPERFAMILY SSF100950 4 226 7.33E-86 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_09960 e24f01d277229ee9a4191f958aee6167 235 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AVL55_09960 e24f01d277229ee9a4191f958aee6167 235 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 218 2.9E-72 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AVL55_09960 e24f01d277229ee9a4191f958aee6167 235 SMART SM00882 8 219 2.1E-85 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AVL55_05645 918d124d5cdf4b398433345ad1087011 277 SUPERFAMILY SSF50182 106 172 5.56E-18 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_05645 918d124d5cdf4b398433345ad1087011 277 Gene3D G3DSA:2.30.30.60 122 171 1.3E-17 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_05645 918d124d5cdf4b398433345ad1087011 277 Gene3D G3DSA:3.30.70.100 172 265 1.9E-25 T 11-10-2018 AVL55_05645 918d124d5cdf4b398433345ad1087011 277 SUPERFAMILY SSF82861 20 105 4.71E-17 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AVL55_05645 918d124d5cdf4b398433345ad1087011 277 SUPERFAMILY SSF82689 173 272 1.06E-30 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AVL55_05645 918d124d5cdf4b398433345ad1087011 277 Pfam PF00924 Mechanosensitive ion channel 64 260 7.5E-55 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_12620 88b5ac9b79ec248f1fee8079f19cff57 202 SUPERFAMILY SSF49482 49 164 3.14E-16 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AVL55_12620 88b5ac9b79ec248f1fee8079f19cff57 202 Gene3D G3DSA:2.60.130.10 38 201 3.4E-18 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AVL55_12620 88b5ac9b79ec248f1fee8079f19cff57 202 Pfam PF00775 Dioxygenase 50 136 6.7E-12 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AVL55_13250 d183cd000a0637ec363e1ed95abb7886 327 Pfam PF01479 S4 domain 22 61 9.5E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_13250 d183cd000a0637ec363e1ed95abb7886 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_13250 d183cd000a0637ec363e1ed95abb7886 327 SMART SM00363 21 86 3.5E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_13250 d183cd000a0637ec363e1ed95abb7886 327 Gene3D G3DSA:3.10.290.10 6 77 8.9E-18 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AVL55_13250 d183cd000a0637ec363e1ed95abb7886 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 315 3.7E-105 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_13250 d183cd000a0637ec363e1ed95abb7886 327 SUPERFAMILY SSF55120 82 319 1.71E-80 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_13250 d183cd000a0637ec363e1ed95abb7886 327 Pfam PF00849 RNA pseudouridylate synthase 95 245 8.9E-33 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_13250 d183cd000a0637ec363e1ed95abb7886 327 SUPERFAMILY SSF55174 21 73 3.7E-10 T 11-10-2018 AVL55_13250 d183cd000a0637ec363e1ed95abb7886 327 Gene3D G3DSA:3.30.2350.10 87 319 6.4E-74 T 11-10-2018 AVL55_12180 13e2f7894e8c04c9ac27f28ca137e343 327 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 110 313 1.7E-14 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AVL55_12180 13e2f7894e8c04c9ac27f28ca137e343 327 SUPERFAMILY SSF56219 102 321 1.07E-29 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_12180 13e2f7894e8c04c9ac27f28ca137e343 327 Gene3D G3DSA:3.60.10.10 102 324 2.1E-22 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_12400 20845aa565a654b0b47ad141864877d2 321 SUPERFAMILY SSF56349 21 310 8.24E-47 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_12400 20845aa565a654b0b47ad141864877d2 321 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 10 91 3.2E-18 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AVL55_12400 20845aa565a654b0b47ad141864877d2 321 Gene3D G3DSA:1.10.150.130 7 94 6.8E-21 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AVL55_12400 20845aa565a654b0b47ad141864877d2 321 TIGRFAM TIGR02249 integrase_gron: integron integrase 11 321 8.4E-105 T 11-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 AVL55_12400 20845aa565a654b0b47ad141864877d2 321 Gene3D G3DSA:1.10.443.10 99 312 4.7E-58 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_12400 20845aa565a654b0b47ad141864877d2 321 Pfam PF00589 Phage integrase family 109 310 2.2E-38 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 Pfam PF12848 ABC transporter 230 304 2.2E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 Gene3D G3DSA:3.40.50.300 286 555 1.3E-75 T 11-10-2018 AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 Gene3D G3DSA:3.40.50.300 1 285 4.6E-84 T 11-10-2018 AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 3.3E-294 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 Pfam PF00005 ABC transporter 22 191 9.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 SUPERFAMILY SSF52540 12 243 1.43E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 SUPERFAMILY SSF52540 303 528 4.48E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 SMART SM00382 348 521 4.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 SMART SM00382 31 236 6.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13375 a8ac5a964ad18dfacf05cbf5ffca9789 555 Pfam PF00005 ABC transporter 340 473 1.3E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_11190 caabd4f800ecb2b69be2ba68fa417fda 476 Pfam PF00589 Phage integrase family 353 441 1.8E-8 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_11190 caabd4f800ecb2b69be2ba68fa417fda 476 SUPERFAMILY SSF56349 205 447 1.36E-19 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 Gene3D G3DSA:3.30.70.1430 40 800 1.0E-239 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 Pfam PF00873 AcrB/AcrD/AcrF family 3 1005 4.8E-155 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 SUPERFAMILY SSF82714 708 784 7.98E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 Gene3D G3DSA:3.30.70.1440 651 850 1.0E-239 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 SUPERFAMILY SSF82693 136 325 2.62E-19 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 Gene3D G3DSA:3.30.2090.10 179 271 1.0E-239 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 Gene3D G3DSA:1.20.1640.10 10 502 1.0E-239 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 SUPERFAMILY SSF82866 293 492 6.15E-34 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 Gene3D G3DSA:3.30.2090.10 702 792 1.0E-239 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 Gene3D G3DSA:3.30.70.1320 136 328 1.0E-239 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 Gene3D G3DSA:3.30.70.1430 552 650 1.0E-239 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 SUPERFAMILY SSF82693 40 135 2.09E-20 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 SUPERFAMILY SSF82714 184 266 2.62E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 Gene3D G3DSA:1.20.1640.10 503 1002 1.0E-239 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 SUPERFAMILY SSF82866 791 1008 1.7E-44 T 11-10-2018 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 6.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 6.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_06940 16dcff6df22386807d8a6e3e85d9c95e 1013 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_18020 4079cde21d0ad2bf20ae7b70b91daec5 264 Pfam PF01061 ABC-2 type transporter 17 226 9.1E-41 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AVL55_18020 4079cde21d0ad2bf20ae7b70b91daec5 264 PRINTS PR00164 ABC-2 type transport system membrane protein signature 147 171 3.9E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_18020 4079cde21d0ad2bf20ae7b70b91daec5 264 PRINTS PR00164 ABC-2 type transport system membrane protein signature 66 88 3.9E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_18020 4079cde21d0ad2bf20ae7b70b91daec5 264 PRINTS PR00164 ABC-2 type transport system membrane protein signature 184 203 3.9E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_18020 4079cde21d0ad2bf20ae7b70b91daec5 264 PRINTS PR00164 ABC-2 type transport system membrane protein signature 110 135 3.9E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_18020 4079cde21d0ad2bf20ae7b70b91daec5 264 PIRSF PIRSF006648 3 260 3.0E-25 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_03425 90df144bcea70b3276415d5421801324 281 Pfam PF00106 short chain dehydrogenase 8 188 2.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03425 90df144bcea70b3276415d5421801324 281 SUPERFAMILY SSF51735 2 254 2.53E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_03425 90df144bcea70b3276415d5421801324 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03425 90df144bcea70b3276415d5421801324 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03425 90df144bcea70b3276415d5421801324 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 3.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03425 90df144bcea70b3276415d5421801324 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 3.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03425 90df144bcea70b3276415d5421801324 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.8E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03425 90df144bcea70b3276415d5421801324 281 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 161 0.0058 T 11-10-2018 AVL55_03425 90df144bcea70b3276415d5421801324 281 Gene3D G3DSA:3.40.50.720 2 257 8.1E-53 T 11-10-2018 AVL55_03425 90df144bcea70b3276415d5421801324 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_03425 90df144bcea70b3276415d5421801324 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 3.9E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03425 90df144bcea70b3276415d5421801324 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.9E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03425 90df144bcea70b3276415d5421801324 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.9E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13950 5faec5244c30b46de7bdf3f16128b34b 302 TIGRFAM TIGR03814 Gln_ase: glutaminase A 5 302 9.3E-125 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AVL55_13950 5faec5244c30b46de7bdf3f16128b34b 302 Gene3D G3DSA:3.40.710.10 1 302 5.2E-109 T 11-10-2018 AVL55_13950 5faec5244c30b46de7bdf3f16128b34b 302 SUPERFAMILY SSF56601 3 302 2.1E-108 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AVL55_13950 5faec5244c30b46de7bdf3f16128b34b 302 Hamap MF_00313 Glutaminase [glsA]. 1 302 44.809 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AVL55_13950 5faec5244c30b46de7bdf3f16128b34b 302 Pfam PF04960 Glutaminase 19 302 1.1E-110 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AVL55_15915 b42974e495f02f1db23364dc59e67cb7 277 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 27 246 6.9E-78 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related AVL55_15915 b42974e495f02f1db23364dc59e67cb7 277 Gene3D G3DSA:3.40.50.300 6 266 3.4E-92 T 11-10-2018 AVL55_15915 b42974e495f02f1db23364dc59e67cb7 277 PIRSF PIRSF028756 3 275 5.8E-74 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AVL55_15915 b42974e495f02f1db23364dc59e67cb7 277 SUPERFAMILY SSF52540 57 247 2.45E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_19155 fdb870af0715ae2a4826f8654e9ff633 174 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 1.4E-36 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AVL55_11970 ad3f7803fed3a3501442bd25af534b9b 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 53 2.8E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_11970 ad3f7803fed3a3501442bd25af534b9b 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.8E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_11970 ad3f7803fed3a3501442bd25af534b9b 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 2.8E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_11970 ad3f7803fed3a3501442bd25af534b9b 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 2.8E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_11970 ad3f7803fed3a3501442bd25af534b9b 103 Pfam PF01022 Bacterial regulatory protein, arsR family 28 72 7.4E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_11970 ad3f7803fed3a3501442bd25af534b9b 103 SUPERFAMILY SSF46785 16 102 1.36E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_11970 ad3f7803fed3a3501442bd25af534b9b 103 Gene3D G3DSA:1.10.10.10 8 103 1.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_11970 ad3f7803fed3a3501442bd25af534b9b 103 SMART SM00418 21 99 3.4E-23 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_07610 b88097c4566677433c908f648f2cec82 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 168 195 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AVL55_07610 b88097c4566677433c908f648f2cec82 333 Gene3D G3DSA:3.40.50.720 149 303 1.4E-122 T 11-10-2018 AVL55_07610 b88097c4566677433c908f648f2cec82 333 SUPERFAMILY SSF51735 139 301 6.2E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_07610 b88097c4566677433c908f648f2cec82 333 Pfam PF00107 Zinc-binding dehydrogenase 175 297 3.0E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_07610 b88097c4566677433c908f648f2cec82 333 Gene3D G3DSA:3.90.180.10 11 331 1.4E-122 T 11-10-2018 AVL55_07610 b88097c4566677433c908f648f2cec82 333 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AVL55_07610 b88097c4566677433c908f648f2cec82 333 SUPERFAMILY SSF50129 4 163 1.79E-45 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_07610 b88097c4566677433c908f648f2cec82 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 134 1.6E-29 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AVL55_07610 b88097c4566677433c908f648f2cec82 333 SMART SM00829 12 331 8.4E-8 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_18355 c0bbebaf0f6151085f078fc8195ebd48 649 Pfam PF16657 Maltogenic Amylase, C-terminal domain 571 645 9.5E-8 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal AVL55_18355 c0bbebaf0f6151085f078fc8195ebd48 649 SUPERFAMILY SSF51445 19 567 1.02E-111 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_18355 c0bbebaf0f6151085f078fc8195ebd48 649 Gene3D G3DSA:3.90.400.10 186 261 2.6E-196 T 11-10-2018 AVL55_18355 c0bbebaf0f6151085f078fc8195ebd48 649 Gene3D G3DSA:3.20.20.80 99 563 2.6E-196 T 11-10-2018 AVL55_18355 c0bbebaf0f6151085f078fc8195ebd48 649 SMART SM00642 97 560 2.8E-23 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_18355 c0bbebaf0f6151085f078fc8195ebd48 649 SUPERFAMILY SSF51011 574 646 3.21E-10 T 11-10-2018 AVL55_18355 c0bbebaf0f6151085f078fc8195ebd48 649 Pfam PF00128 Alpha amylase, catalytic domain 112 315 1.3E-36 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_18355 c0bbebaf0f6151085f078fc8195ebd48 649 Gene3D G3DSA:1.10.1740.10 9 96 2.1E-19 T 11-10-2018 AVL55_18355 c0bbebaf0f6151085f078fc8195ebd48 649 Gene3D G3DSA:2.60.40.1180 573 647 1.7E-18 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_08470 e29d9b143354205d9e9667cc310f1d18 764 Gene3D G3DSA:2.120.10.30 150 307 1.0E-9 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_08470 e29d9b143354205d9e9667cc310f1d18 764 Pfam PF02333 Phytase 421 754 2.4E-63 T 11-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 AVL55_08470 e29d9b143354205d9e9667cc310f1d18 764 SUPERFAMILY SSF50956 158 296 8.63E-16 T 11-10-2018 AVL55_08470 e29d9b143354205d9e9667cc310f1d18 764 SUPERFAMILY SSF50956 427 751 4.84E-62 T 11-10-2018 AVL55_08470 e29d9b143354205d9e9667cc310f1d18 764 Gene3D G3DSA:2.120.10.30 421 763 1.7E-106 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 129 140 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 240 255 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 128 141 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 569 598 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 701 727 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 378 398 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 527 547 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 181 197 1.4E-66 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 Pfam PF00311 Phosphoenolpyruvate carboxylase 124 873 2.3E-270 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 Gene3D G3DSA:1.20.1440.90 297 381 6.1E-23 T 11-10-2018 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 SUPERFAMILY SSF51621 11 873 1.73E-300 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 873 17.473 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_17085 b46b226e37815a12778e1b5e7e751842 873 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 529 541 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AVL55_00425 376ed50022985fdfa1f85b1c196f0932 62 SUPERFAMILY SSF46785 17 61 7.18E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_18540 22d117794e5a2cb2f33e06d55016c389 380 Pfam PF13484 4Fe-4S double cluster binding domain 195 258 9.0E-20 T 11-10-2018 AVL55_18540 22d117794e5a2cb2f33e06d55016c389 380 SUPERFAMILY SSF46548 141 258 4.34E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AVL55_18540 22d117794e5a2cb2f33e06d55016c389 380 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 16 350 1.3E-154 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AVL55_18540 22d117794e5a2cb2f33e06d55016c389 380 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AVL55_18540 22d117794e5a2cb2f33e06d55016c389 380 Pfam PF08331 Domain of unknown function (DUF1730) 64 142 1.7E-24 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AVL55_18540 22d117794e5a2cb2f33e06d55016c389 380 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 9 317 50.558 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AVL55_07095 7cd9a8c9159b69b6c328c7f81cb471da 218 Gene3D G3DSA:3.40.50.720 1 137 6.4E-32 T 11-10-2018 AVL55_07095 7cd9a8c9159b69b6c328c7f81cb471da 218 SUPERFAMILY SSF51735 3 133 7.09E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_07095 7cd9a8c9159b69b6c328c7f81cb471da 218 Pfam PF02254 TrkA-N domain 6 119 5.7E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AVL55_07095 7cd9a8c9159b69b6c328c7f81cb471da 218 SUPERFAMILY SSF116726 131 212 1.44E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_07095 7cd9a8c9159b69b6c328c7f81cb471da 218 Gene3D G3DSA:3.30.70.1450 138 213 2.1E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_09580 aab7f9dd2b9c7adc00f0f6aa9b8c4169 124 Gene3D G3DSA:1.20.1300.10 1 124 9.3E-41 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09580 aab7f9dd2b9c7adc00f0f6aa9b8c4169 124 PIRSF PIRSF000178 1 124 2.0E-29 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09580 aab7f9dd2b9c7adc00f0f6aa9b8c4169 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09580 aab7f9dd2b9c7adc00f0f6aa9b8c4169 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 121 7.8E-40 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09580 aab7f9dd2b9c7adc00f0f6aa9b8c4169 124 SUPERFAMILY SSF81343 2 124 1.18E-33 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09580 aab7f9dd2b9c7adc00f0f6aa9b8c4169 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09580 aab7f9dd2b9c7adc00f0f6aa9b8c4169 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 119 5.9E-30 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 217 497 5.0E-43 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 4.9E-37 T 11-10-2018 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 4.9E-37 T 11-10-2018 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 4.9E-37 T 11-10-2018 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 4.9E-37 T 11-10-2018 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 218 237 4.9E-37 T 11-10-2018 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 SUPERFAMILY SSF51905 217 513 1.57E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 Pfam PF13192 Thioredoxin domain 122 198 3.1E-11 T 11-10-2018 IPR012336 Thioredoxin-like fold AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 279 4.3E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 4.3E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 249 264 4.3E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 4.3E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 4.3E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 217 239 4.3E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 4.3E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 4.3E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 4.3E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 Gene3D G3DSA:3.40.30.80 1 201 7.5E-59 T 11-10-2018 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 PIRSF PIRSF000238 1 520 2.3E-212 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 SUPERFAMILY SSF52833 2 102 8.83E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 SUPERFAMILY SSF52833 106 197 8.53E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 Gene3D G3DSA:3.50.50.60 217 507 1.1E-103 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 Gene3D G3DSA:3.50.50.60 326 449 1.1E-103 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_08920 963f9d0f65b8011163d6a38352f5ba52 529 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 2 516 2.6E-230 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AVL55_17025 2996e1b616e44b848513ee9624454965 357 SUPERFAMILY SSF100879 241 354 5.18E-25 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_17025 2996e1b616e44b848513ee9624454965 357 Hamap MF_01113 DNA polymerase IV [dinB]. 1 352 37.163 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AVL55_17025 2996e1b616e44b848513ee9624454965 357 SUPERFAMILY SSF56672 1 233 4.71E-92 T 11-10-2018 AVL55_17025 2996e1b616e44b848513ee9624454965 357 Gene3D G3DSA:2.30.40.20 21 73 3.5E-62 T 11-10-2018 AVL55_17025 2996e1b616e44b848513ee9624454965 357 Gene3D G3DSA:3.30.1490.100 237 354 1.4E-26 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_17025 2996e1b616e44b848513ee9624454965 357 Gene3D G3DSA:1.10.150.20 176 229 1.5E-17 T 11-10-2018 AVL55_17025 2996e1b616e44b848513ee9624454965 357 Pfam PF00817 impB/mucB/samB family 7 154 4.9E-48 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_17025 2996e1b616e44b848513ee9624454965 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 348 2.2E-9 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_17025 2996e1b616e44b848513ee9624454965 357 Gene3D G3DSA:3.30.70.270 4 164 3.5E-62 T 11-10-2018 AVL55_17025 2996e1b616e44b848513ee9624454965 357 Pfam PF11798 IMS family HHH motif 166 197 1.1E-7 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AVL55_01575 e8d8f6d530f4cedf481f9134970d4eea 164 Gene3D G3DSA:1.25.40.10 34 136 3.1E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_01575 e8d8f6d530f4cedf481f9134970d4eea 164 SUPERFAMILY SSF81901 36 101 2.22E-12 T 11-10-2018 AVL55_01575 e8d8f6d530f4cedf481f9134970d4eea 164 SMART SM00671 67 102 6.1E-4 T 11-10-2018 IPR006597 Sel1-like repeat AVL55_02635 beb9714b06463f851f7887bb2abfa226 571 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 14 521 3.2E-103 T 11-10-2018 IPR019934 Conserved hypothetical protein CHP03545 AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 Gene3D G3DSA:3.40.50.970 1 178 1.6E-62 T 11-10-2018 AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 524 1.0E-36 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.6E-55 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 Gene3D G3DSA:3.40.50.1220 180 328 1.2E-35 T 11-10-2018 AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 318 6.9E-31 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 SUPERFAMILY SSF52518 355 540 1.45E-56 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 SUPERFAMILY SSF52518 1 177 1.45E-49 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 SUPERFAMILY SSF52467 178 361 1.66E-39 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AVL55_18470 1321ed5d4770f74b65df659242af75dc 546 Gene3D G3DSA:3.40.50.970 335 540 1.2E-52 T 11-10-2018 AVL55_08825 79d50bf5b8e89626e268cd8257fa1bf7 100 SUPERFAMILY SSF55248 1 99 2.88E-32 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AVL55_08825 79d50bf5b8e89626e268cd8257fa1bf7 100 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 100 22.964 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AVL55_08825 79d50bf5b8e89626e268cd8257fa1bf7 100 Gene3D G3DSA:3.30.1360.20 1 100 1.7E-33 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AVL55_08825 79d50bf5b8e89626e268cd8257fa1bf7 100 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 98 2.1E-30 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AVL55_16935 1cab414b0a908c395b4a8f9ac3391174 108 Pfam PF00563 EAL domain 1 92 7.4E-29 T 11-10-2018 IPR001633 EAL domain AVL55_16935 1cab414b0a908c395b4a8f9ac3391174 108 Gene3D G3DSA:3.20.20.450 1 100 3.0E-36 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_16935 1cab414b0a908c395b4a8f9ac3391174 108 SUPERFAMILY SSF141868 1 104 9.55E-35 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 3.1E-186 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 SUPERFAMILY SSF51735 6 187 3.41E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 2.9E-118 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 165 193 6.1E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 326 352 6.1E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 235 251 6.1E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 141 154 6.1E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 217 234 6.1E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 185 1.7E-54 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 Gene3D G3DSA:3.40.50.720 12 438 4.0E-169 T 11-10-2018 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 PIRSF PIRSF000110 1 492 2.5E-174 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 Gene3D G3DSA:3.30.360.10 175 476 4.0E-169 T 11-10-2018 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 175 181 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 SUPERFAMILY SSF55347 175 489 1.05E-114 T 11-10-2018 AVL55_12140 238b529e90ea69b68e0766cf75f4f5bd 497 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 490 86.136 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AVL55_17655 9546e0071031f0a98d5256bedbcede03 185 Pfam PF12802 MarR family 22 72 8.6E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_17655 9546e0071031f0a98d5256bedbcede03 185 PIRSF PIRSF006707 1 176 9.1E-47 T 11-10-2018 IPR026282 DNA-binding protein, MJ1563 type AVL55_17655 9546e0071031f0a98d5256bedbcede03 185 SUPERFAMILY SSF46785 6 145 5.77E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_17655 9546e0071031f0a98d5256bedbcede03 185 Gene3D G3DSA:1.10.10.10 6 84 4.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_12150 794910723f7c1dde4ea25704924fc337 478 SUPERFAMILY SSF51621 2 342 2.28E-86 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 SUPERFAMILY SSF50800 71 166 1.67E-24 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AVL55_12150 794910723f7c1dde4ea25704924fc337 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 475 6.4E-28 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 Gene3D G3DSA:3.40.1380.20 339 473 1.9E-152 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 5.4E-127 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 Gene3D G3DSA:2.40.33.10 71 169 1.9E-152 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 477 2.2E-164 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 Gene3D G3DSA:3.20.20.60 3 338 1.9E-152 T 11-10-2018 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 SUPERFAMILY SSF52935 326 477 4.84E-35 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 3.6E-51 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 PRINTS PR01050 Pyruvate kinase family signature 187 201 3.6E-51 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 PRINTS PR01050 Pyruvate kinase family signature 297 315 3.6E-51 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 PRINTS PR01050 Pyruvate kinase family signature 220 246 3.6E-51 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 PRINTS PR01050 Pyruvate kinase family signature 316 332 3.6E-51 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 PRINTS PR01050 Pyruvate kinase family signature 247 271 3.6E-51 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_12150 794910723f7c1dde4ea25704924fc337 478 PRINTS PR01050 Pyruvate kinase family signature 272 296 3.6E-51 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AVL55_08665 bd851fba87c18da44fdbbea0f218e69d 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 336 4.2E-110 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AVL55_08665 bd851fba87c18da44fdbbea0f218e69d 341 SUPERFAMILY SSF53659 4 337 1.07E-106 T 11-10-2018 AVL55_08665 bd851fba87c18da44fdbbea0f218e69d 341 Gene3D G3DSA:3.40.718.10 2 340 2.2E-126 T 11-10-2018 AVL55_08665 bd851fba87c18da44fdbbea0f218e69d 341 Pfam PF02504 Fatty acid synthesis protein 5 324 3.9E-104 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AVL55_08665 bd851fba87c18da44fdbbea0f218e69d 341 PIRSF PIRSF002465 2 340 1.5E-123 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AVL55_08665 bd851fba87c18da44fdbbea0f218e69d 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 341 135.213 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AVL55_19205 8eccd81bd94ba07326be4895836ab4bb 711 Pfam PF00929 Exonuclease 544 698 4.5E-37 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_19205 8eccd81bd94ba07326be4895836ab4bb 711 SUPERFAMILY SSF53098 540 703 6.56E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_19205 8eccd81bd94ba07326be4895836ab4bb 711 SMART SM00990 449 535 5.1E-14 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AVL55_19205 8eccd81bd94ba07326be4895836ab4bb 711 Gene3D G3DSA:3.40.1350.10 459 536 6.7E-7 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AVL55_19205 8eccd81bd94ba07326be4895836ab4bb 711 Gene3D G3DSA:3.30.420.10 537 706 5.6E-50 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_19205 8eccd81bd94ba07326be4895836ab4bb 711 Pfam PF08774 VRR-NUC domain 469 535 4.7E-9 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AVL55_19205 8eccd81bd94ba07326be4895836ab4bb 711 SMART SM00479 542 707 5.6E-47 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_19205 8eccd81bd94ba07326be4895836ab4bb 711 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 543 704 6.5E-37 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 SUPERFAMILY SSF69864 175 400 1.7E-85 T 11-10-2018 AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 SUPERFAMILY SSF52402 5 169 3.09E-48 T 11-10-2018 AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 Gene3D G3DSA:3.40.50.620 7 175 3.2E-147 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 Gene3D G3DSA:1.20.5.470 366 402 8.6E-8 T 11-10-2018 AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 400 51.627 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 Gene3D G3DSA:3.90.1260.10 66 355 3.2E-147 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 395 4.6E-141 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AVL55_01995 8e2ff1def3bcf24ca865f066534db1c6 403 Pfam PF00764 Arginosuccinate synthase 8 394 5.6E-150 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AVL55_03530 42930463603a10b2adab022933e62ed9 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 5.5E-12 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AVL55_03530 42930463603a10b2adab022933e62ed9 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 5.5E-12 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AVL55_03530 42930463603a10b2adab022933e62ed9 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 5.5E-12 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AVL55_03530 42930463603a10b2adab022933e62ed9 90 Gene3D G3DSA:3.30.1340.10 3 89 2.0E-29 T 11-10-2018 IPR035895 HPr-like superfamily AVL55_03530 42930463603a10b2adab022933e62ed9 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 83 4.0E-27 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AVL55_03530 42930463603a10b2adab022933e62ed9 90 Pfam PF00381 PTS HPr component phosphorylation site 4 83 4.8E-27 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AVL55_03530 42930463603a10b2adab022933e62ed9 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AVL55_03530 42930463603a10b2adab022933e62ed9 90 SUPERFAMILY SSF55594 4 89 4.71E-27 T 11-10-2018 IPR035895 HPr-like superfamily AVL55_00270 519c6a45e2cb8a136d021f2c66fee88d 78 SUPERFAMILY SSF143800 2 77 7.85E-30 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_00270 519c6a45e2cb8a136d021f2c66fee88d 78 Gene3D G3DSA:2.30.170.40 2 78 4.4E-33 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_00270 519c6a45e2cb8a136d021f2c66fee88d 78 Pfam PF00830 Ribosomal L28 family 3 62 3.1E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_00270 519c6a45e2cb8a136d021f2c66fee88d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.1E-27 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_00270 519c6a45e2cb8a136d021f2c66fee88d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.586 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17555 d4e3248df10e93ab6ebb54a389989b68 179 Pfam PF00281 Ribosomal protein L5 24 80 1.3E-27 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17555 d4e3248df10e93ab6ebb54a389989b68 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.1E-41 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17555 d4e3248df10e93ab6ebb54a389989b68 179 Gene3D G3DSA:3.30.1440.10 1 179 8.5E-81 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17555 d4e3248df10e93ab6ebb54a389989b68 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.689 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17555 d4e3248df10e93ab6ebb54a389989b68 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17555 d4e3248df10e93ab6ebb54a389989b68 179 SUPERFAMILY SSF55282 4 179 2.12E-79 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17555 d4e3248df10e93ab6ebb54a389989b68 179 PIRSF PIRSF002161 1 179 8.4E-67 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 Gene3D G3DSA:3.50.50.60 4 317 1.6E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.5E-65 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 1.5E-65 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.5E-65 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 1.5E-65 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 1.5E-65 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 1.5E-65 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 1.5E-65 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.5E-65 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.5E-65 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PIRSF PIRSF000350 1 445 6.8E-87 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.1E-26 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 1.1E-26 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.1E-26 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.1E-26 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 1.1E-26 T 11-10-2018 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 Gene3D G3DSA:3.50.50.60 143 260 1.6E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 448 2.3E-213 T 11-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 448 1.8E-33 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 1.6E-66 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 Gene3D G3DSA:3.30.390.30 337 449 2.9E-47 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 SUPERFAMILY SSF51905 1 358 1.23E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_17725 f4835253d85c75bb8c3f168e56138f42 449 SUPERFAMILY SSF55424 335 448 3.09E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AVL55_11825 d25cb53b3502e7a2b5a08d2ffef25787 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 107 4.0E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AVL55_11825 d25cb53b3502e7a2b5a08d2ffef25787 126 Gene3D G3DSA:3.10.180.10 1 109 1.1E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_11825 d25cb53b3502e7a2b5a08d2ffef25787 126 SUPERFAMILY SSF54593 1 122 9.93E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_07785 79be073f8b0f4dc1de4a9ed95c054ba5 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.189 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AVL55_07785 79be073f8b0f4dc1de4a9ed95c054ba5 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 1.2E-43 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AVL55_07785 79be073f8b0f4dc1de4a9ed95c054ba5 378 SUPERFAMILY SSF53187 4 376 9.43E-63 T 11-10-2018 AVL55_07785 79be073f8b0f4dc1de4a9ed95c054ba5 378 Pfam PF07687 Peptidase dimerisation domain 177 284 1.6E-22 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AVL55_07785 79be073f8b0f4dc1de4a9ed95c054ba5 378 SUPERFAMILY SSF55031 181 291 7.03E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AVL55_07785 79be073f8b0f4dc1de4a9ed95c054ba5 378 Gene3D G3DSA:3.30.70.360 181 294 3.0E-125 T 11-10-2018 AVL55_07785 79be073f8b0f4dc1de4a9ed95c054ba5 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 1.3E-166 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AVL55_07785 79be073f8b0f4dc1de4a9ed95c054ba5 378 Gene3D G3DSA:3.40.630.10 10 364 3.0E-125 T 11-10-2018 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 144 173 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 Gene3D G3DSA:3.30.559.10 319 563 2.3E-81 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 SUPERFAMILY SSF51230 1 87 1.57E-24 T 11-10-2018 IPR011053 Single hybrid motif AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 Pfam PF02817 e3 binding domain 259 294 8.0E-17 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 SUPERFAMILY SSF51230 120 206 2.36E-23 T 11-10-2018 IPR011053 Single hybrid motif AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 Gene3D G3DSA:4.10.320.10 255 299 1.1E-17 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 Pfam PF00364 Biotin-requiring enzyme 4 75 2.0E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 Pfam PF00364 Biotin-requiring enzyme 121 192 2.0E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 SUPERFAMILY SSF52777 327 563 8.9E-72 T 11-10-2018 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 SUPERFAMILY SSF47005 256 297 1.57E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 Gene3D G3DSA:2.40.50.100 2 103 2.7E-22 T 11-10-2018 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 Gene3D G3DSA:2.40.50.100 113 220 3.9E-21 T 11-10-2018 AVL55_10025 8b777e6a9850e719be76bb326cc9f1f6 566 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 334 563 1.3E-78 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 SMART SM01274 79 259 1.4E-105 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 SUPERFAMILY SSF51735 269 560 4.14E-94 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 2 563 68.747 T 11-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 PIRSF PIRSF000106 1 561 2.9E-226 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 PRINTS PR00072 Malic enzyme signature 265 281 3.4E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 PRINTS PR00072 Malic enzyme signature 296 312 3.4E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 PRINTS PR00072 Malic enzyme signature 406 422 3.4E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 PRINTS PR00072 Malic enzyme signature 85 109 3.4E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 PRINTS PR00072 Malic enzyme signature 145 174 3.4E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 PRINTS PR00072 Malic enzyme signature 181 203 3.4E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 PRINTS PR00072 Malic enzyme signature 240 258 3.4E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 Gene3D G3DSA:3.40.50.720 267 562 1.2E-105 T 11-10-2018 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 SUPERFAMILY SSF53223 5 268 3.02E-110 T 11-10-2018 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 Pfam PF03949 Malic enzyme, NAD binding domain 269 528 6.6E-100 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 ProSitePatterns PS00331 Malic enzymes signature. 265 281 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 Gene3D G3DSA:3.40.50.10380 13 266 1.7E-114 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 SMART SM00919 269 529 2.6E-124 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AVL55_01950 3af98ad8649d4e8945659dcfd062ef1f 563 Pfam PF00390 Malic enzyme, N-terminal domain 79 259 1.2E-77 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AVL55_14505 c059f31327c098244b44bc0aed89e49b 218 Gene3D G3DSA:3.90.226.10 2 218 2.8E-57 T 11-10-2018 AVL55_14505 c059f31327c098244b44bc0aed89e49b 218 SUPERFAMILY SSF52096 7 212 2.49E-41 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_14505 c059f31327c098244b44bc0aed89e49b 218 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 212 6.5E-37 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AVL55_15365 5269c1a2558f54bd9d386335c8b8d318 600 SUPERFAMILY SSF63825 73 306 2.17E-9 T 11-10-2018 AVL55_15365 5269c1a2558f54bd9d386335c8b8d318 600 Gene3D G3DSA:2.130.10.10 67 321 3.4E-8 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_15365 5269c1a2558f54bd9d386335c8b8d318 600 Gene3D G3DSA:1.20.5.320 24 66 5.6E-7 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 SUPERFAMILY SSF81653 222 318 4.32E-28 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 133 729 1.8E-185 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 Gene3D G3DSA:3.30.70.100 1 60 3.9E-15 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00943 Copper-transporting ATPase signature 37 57 3.2E-10 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00943 Copper-transporting ATPase signature 208 226 3.2E-10 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00943 Copper-transporting ATPase signature 136 155 3.2E-10 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00943 Copper-transporting ATPase signature 403 418 3.2E-10 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00943 Copper-transporting ATPase signature 596 613 3.2E-10 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00943 Copper-transporting ATPase signature 341 355 3.2E-10 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 SUPERFAMILY SSF55008 1 64 8.51E-15 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 422 428 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 191 698 2.0E-91 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 Gene3D G3DSA:2.70.150.20 211 323 6.6E-41 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 Pfam PF00403 Heavy-metal-associated domain 1 55 4.8E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 SUPERFAMILY SSF56784 420 725 4.56E-59 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 Pfam PF00122 E1-E2 ATPase 219 399 4.6E-56 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 151 728 1.3E-188 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 SUPERFAMILY SSF81665 167 700 1.96E-10 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 Gene3D G3DSA:3.40.50.1000 401 671 1.2E-93 T 11-10-2018 IPR023214 HAD superfamily AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 Gene3D G3DSA:3.40.1110.10 431 551 1.2E-93 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 Pfam PF00702 haloacid dehalogenase-like hydrolase 416 633 3.2E-42 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 544 555 7.5E-28 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 619 638 7.5E-28 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 566 576 7.5E-28 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 268 282 7.5E-28 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 654 7.5E-28 T 11-10-2018 AVL55_01245 78abb3a8e041ff9f1592ba39d38bcc15 736 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 420 434 7.5E-28 T 11-10-2018 AVL55_00150 d5ab35328bafe7693e8518a9d8e9817d 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 9.0E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_00150 d5ab35328bafe7693e8518a9d8e9817d 180 SUPERFAMILY SSF51161 7 177 1.05E-42 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_00150 d5ab35328bafe7693e8518a9d8e9817d 180 Gene3D G3DSA:2.160.10.10 1 180 1.6E-51 T 11-10-2018 AVL55_04660 ba12e3e78758a9047d47c24e4aa8d4cd 99 Gene3D G3DSA:1.20.1440.40 1 96 2.6E-21 T 11-10-2018 IPR036814 YqcC-like superfamily AVL55_04660 ba12e3e78758a9047d47c24e4aa8d4cd 99 Pfam PF04287 tRNA pseudouridine synthase C 1 92 7.3E-20 T 11-10-2018 IPR023376 YqcC-like domain AVL55_04660 ba12e3e78758a9047d47c24e4aa8d4cd 99 SUPERFAMILY SSF158452 1 96 9.81E-22 T 11-10-2018 IPR036814 YqcC-like superfamily AVL55_14945 81700c704d636a7a6aee3167f73722c7 556 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 266 553 3.5E-127 T 11-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type AVL55_14945 81700c704d636a7a6aee3167f73722c7 556 Pfam PF02653 Branched-chain amino acid transport system / permease component 268 539 7.7E-51 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AVL55_02400 8be733aa0fffede02edc42594864a140 285 Gene3D G3DSA:1.10.10.10 4 93 1.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_02400 8be733aa0fffede02edc42594864a140 285 Pfam PF03466 LysR substrate binding domain 89 249 3.0E-22 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_02400 8be733aa0fffede02edc42594864a140 285 Gene3D G3DSA:3.40.190.10 163 256 1.9E-45 T 11-10-2018 AVL55_02400 8be733aa0fffede02edc42594864a140 285 SUPERFAMILY SSF46785 4 112 8.55E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_02400 8be733aa0fffede02edc42594864a140 285 Gene3D G3DSA:3.40.190.10 96 261 1.9E-45 T 11-10-2018 AVL55_02400 8be733aa0fffede02edc42594864a140 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 2.3E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_02400 8be733aa0fffede02edc42594864a140 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_02400 8be733aa0fffede02edc42594864a140 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_02400 8be733aa0fffede02edc42594864a140 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_02400 8be733aa0fffede02edc42594864a140 285 SUPERFAMILY SSF53850 89 284 3.26E-21 T 11-10-2018 AVL55_02905 c54a5a507fcb7cf497864f7022fa51ea 172 SUPERFAMILY SSF55729 7 161 2.34E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_02905 c54a5a507fcb7cf497864f7022fa51ea 172 Pfam PF13302 Acetyltransferase (GNAT) domain 13 150 2.0E-18 T 11-10-2018 IPR000182 GNAT domain AVL55_02905 c54a5a507fcb7cf497864f7022fa51ea 172 Gene3D G3DSA:3.40.630.30 1 165 2.7E-29 T 11-10-2018 AVL55_11330 60fab090d4666f35a55e8f1dc41e55d9 243 Pfam PF13649 Methyltransferase domain 60 158 1.3E-11 T 11-10-2018 AVL55_11330 60fab090d4666f35a55e8f1dc41e55d9 243 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 242 1.5E-93 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AVL55_11330 60fab090d4666f35a55e8f1dc41e55d9 243 Gene3D G3DSA:3.40.50.150 18 243 1.3E-55 T 11-10-2018 AVL55_11330 60fab090d4666f35a55e8f1dc41e55d9 243 PIRSF PIRSF006325 1 243 5.1E-97 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AVL55_11330 60fab090d4666f35a55e8f1dc41e55d9 243 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 38.836 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AVL55_11330 60fab090d4666f35a55e8f1dc41e55d9 243 SUPERFAMILY SSF53335 19 242 7.84E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_18365 f81d477d72cefe1f849004ff0abf7f2f 227 SUPERFAMILY SSF55620 23 226 2.0E-69 T 11-10-2018 AVL55_18365 f81d477d72cefe1f849004ff0abf7f2f 227 Gene3D G3DSA:1.10.286.10 11 97 6.7E-32 T 11-10-2018 AVL55_18365 f81d477d72cefe1f849004ff0abf7f2f 227 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 47 227 30.051 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AVL55_18365 f81d477d72cefe1f849004ff0abf7f2f 227 Gene3D G3DSA:3.30.1130.10 98 227 5.0E-47 T 11-10-2018 AVL55_18365 f81d477d72cefe1f849004ff0abf7f2f 227 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 157 167 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AVL55_18365 f81d477d72cefe1f849004ff0abf7f2f 227 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 51 226 1.6E-72 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AVL55_18365 f81d477d72cefe1f849004ff0abf7f2f 227 Pfam PF01227 GTP cyclohydrolase I 51 226 3.3E-58 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AVL55_06910 2e0cba867665b2c64353d06d48f9a8b9 119 Gene3D G3DSA:3.10.180.10 1 118 2.2E-13 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_06910 2e0cba867665b2c64353d06d48f9a8b9 119 SUPERFAMILY SSF54593 5 115 1.41E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 Gene3D G3DSA:3.30.70.1320 135 334 0.0 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 Gene3D G3DSA:3.30.70.1430 578 679 0.0 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 SUPERFAMILY SSF82693 40 133 8.63E-26 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 SUPERFAMILY SSF82714 733 818 8.11E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 Gene3D G3DSA:1.20.1640.10 10 523 0.0 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 SUPERFAMILY SSF82866 842 1037 2.09E-45 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 SUPERFAMILY SSF82714 185 274 2.75E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 Gene3D G3DSA:3.30.70.1430 40 828 0.0 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.3E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 1.3E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.3E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.3E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.3E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.3E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 1.3E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1050 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 Gene3D G3DSA:1.20.1640.10 524 1034 0.0 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 Gene3D G3DSA:3.30.70.1440 680 877 0.0 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 Gene3D G3DSA:3.30.2090.10 732 820 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 SUPERFAMILY SSF82866 298 498 1.96E-50 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 Pfam PF00873 AcrB/AcrD/AcrF family 4 1038 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 SUPERFAMILY SSF82693 683 868 4.45E-29 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 SUPERFAMILY SSF82693 137 332 9.16E-26 T 11-10-2018 AVL55_05920 ccb975c98e3c86fb771dd2487a1e1233 1063 SUPERFAMILY SSF82693 576 682 1.15E-29 T 11-10-2018 AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 3.5E-64 T 11-10-2018 AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.7E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.7E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.7E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.7E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.7E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.7E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 Gene3D G3DSA:3.40.50.720 1 252 1.2E-78 T 11-10-2018 AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 SUPERFAMILY SSF51735 9 252 1.78E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11440 134b55de3796c97cd8e10c7e4cbb20f3 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 SUPERFAMILY SSF55785 141 245 1.39E-12 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 Gene3D G3DSA:3.30.70.270 256 421 3.4E-43 T 11-10-2018 AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 122 1.0E-25 T 11-10-2018 IPR000014 PAS domain AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 251 6.3E-8 T 11-10-2018 IPR000014 PAS domain AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 413 3.3E-36 T 11-10-2018 IPR000160 GGDEF domain AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 Pfam PF08447 PAS fold 23 109 7.5E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 Pfam PF08447 PAS fold 154 237 2.8E-11 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 Gene3D G3DSA:3.30.450.20 124 242 3.5E-17 T 11-10-2018 AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 SUPERFAMILY SSF55785 8 117 1.24E-22 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 Gene3D G3DSA:3.30.450.20 1 123 2.2E-23 T 11-10-2018 AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 SMART SM00267 251 420 1.9E-32 T 11-10-2018 IPR000160 GGDEF domain AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 414 4.0E-37 T 11-10-2018 IPR000160 GGDEF domain AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 SMART SM00091 127 198 5.4 T 11-10-2018 IPR000014 PAS domain AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 SMART SM00091 1 66 0.67 T 11-10-2018 IPR000014 PAS domain AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 SUPERFAMILY SSF55073 267 414 1.49E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 SMART SM00086 202 244 0.3 T 11-10-2018 IPR001610 PAC motif AVL55_07920 d6301b232cf8948bd925af37a6f2a98f 425 SMART SM00086 73 115 1.3E-9 T 11-10-2018 IPR001610 PAC motif AVL55_03080 3949a928526ee552dc4f309383375f86 349 SUPERFAMILY SSF111369 55 272 2.09E-42 T 11-10-2018 AVL55_03080 3949a928526ee552dc4f309383375f86 349 Gene3D G3DSA:2.40.420.20 277 344 6.6E-73 T 11-10-2018 AVL55_03080 3949a928526ee552dc4f309383375f86 349 Gene3D G3DSA:2.40.30.170 53 276 6.6E-73 T 11-10-2018 AVL55_03080 3949a928526ee552dc4f309383375f86 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 266 4.8E-31 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_03080 3949a928526ee552dc4f309383375f86 349 Gene3D G3DSA:2.40.50.100 66 194 6.6E-73 T 11-10-2018 AVL55_03080 3949a928526ee552dc4f309383375f86 349 Gene3D G3DSA:1.10.287.470 101 160 6.6E-73 T 11-10-2018 AVL55_03080 3949a928526ee552dc4f309383375f86 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 346 7.0E-80 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_07690 b20fd2649501a2f16d2d4e681632b167 365 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 3 360 75.893 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AVL55_07690 b20fd2649501a2f16d2d4e681632b167 365 Pfam PF01728 FtsJ-like methyltransferase 191 250 4.2E-5 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AVL55_07690 b20fd2649501a2f16d2d4e681632b167 365 Gene3D G3DSA:3.30.70.2810 3 81 1.1E-21 T 11-10-2018 AVL55_07690 b20fd2649501a2f16d2d4e681632b167 365 SUPERFAMILY SSF53335 189 287 1.47E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_07690 b20fd2649501a2f16d2d4e681632b167 365 PIRSF PIRSF028774 3 365 5.5E-131 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AVL55_07690 b20fd2649501a2f16d2d4e681632b167 365 Gene3D G3DSA:3.30.2300.20 82 180 2.5E-32 T 11-10-2018 AVL55_07690 b20fd2649501a2f16d2d4e681632b167 365 Gene3D G3DSA:3.40.50.150 181 361 3.3E-49 T 11-10-2018 AVL55_11595 9df9e704936c5efd18a6b020ad5c061e 406 Gene3D G3DSA:3.90.1150.10 22 398 3.3E-141 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_11595 9df9e704936c5efd18a6b020ad5c061e 406 Gene3D G3DSA:3.40.640.10 53 294 3.3E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_11595 9df9e704936c5efd18a6b020ad5c061e 406 SUPERFAMILY SSF53383 7 401 2.63E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_11595 9df9e704936c5efd18a6b020ad5c061e 406 Pfam PF00155 Aminotransferase class I and II 36 381 5.4E-55 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 SUPERFAMILY SSF88697 276 345 9.23E-9 T 11-10-2018 IPR015947 PUA-like superfamily AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 SUPERFAMILY SSF53633 7 256 2.49E-59 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 1.8E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 1.8E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 1.8E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 1.8E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 Gene3D G3DSA:2.30.130.10 265 364 1.3E-10 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 PIRSF PIRSF000729 2 367 2.3E-99 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 353 3.5E-96 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 Gene3D G3DSA:3.40.1160.10 2 263 1.0E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 258 31.229 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AVL55_09365 e3b2fdbb2aa454ff0036ac33e045b0ba 369 Pfam PF00696 Amino acid kinase family 7 234 9.2E-39 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 Pfam PF00158 Sigma-54 interaction domain 143 309 2.6E-72 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 Gene3D G3DSA:3.40.50.300 134 313 3.2E-67 T 11-10-2018 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 Gene3D G3DSA:1.10.10.60 395 448 1.3E-11 T 11-10-2018 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 SMART SM00382 163 306 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 Gene3D G3DSA:1.10.8.60 314 381 8.1E-23 T 11-10-2018 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 5 446 1.1E-210 T 11-10-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 SMART SM00448 3 117 7.3E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 Pfam PF00072 Response regulator receiver domain 5 114 6.4E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 SUPERFAMILY SSF52540 143 384 6.69E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 SUPERFAMILY SSF46689 356 446 1.33E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 Pfam PF02954 Bacterial regulatory protein, Fis family 405 443 1.1E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 SUPERFAMILY SSF52172 4 188 5.98E-30 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_15350 95a8fb344729053f97dd8949ee1b7fb4 453 Gene3D G3DSA:3.40.50.2300 2 133 9.2E-22 T 11-10-2018 AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 SUPERFAMILY SSF51735 2 229 5.62E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 206 1.6E-4 T 11-10-2018 AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 Pfam PF00106 short chain dehydrogenase 7 198 2.8E-59 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 Gene3D G3DSA:3.40.50.720 1 240 1.1E-74 T 11-10-2018 AVL55_11205 9b6d094e8d646736c57b3929abcc7f8b 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_13820 3aa003f338d102e5378dd2e7ea49b3fa 253 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 242 7.7E-108 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 AVL55_13820 3aa003f338d102e5378dd2e7ea49b3fa 253 SUPERFAMILY SSF52540 2 229 3.79E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13820 3aa003f338d102e5378dd2e7ea49b3fa 253 SMART SM00382 26 229 2.7E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13820 3aa003f338d102e5378dd2e7ea49b3fa 253 Gene3D G3DSA:3.40.50.300 1 247 1.6E-59 T 11-10-2018 AVL55_13820 3aa003f338d102e5378dd2e7ea49b3fa 253 Pfam PF00005 ABC transporter 18 172 4.3E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_06355 4006a38e77b760bfd8c827827d779f58 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 156 277 8.4E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_06355 4006a38e77b760bfd8c827827d779f58 977 Gene3D G3DSA:2.170.130.10 137 281 3.0E-28 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_06355 4006a38e77b760bfd8c827827d779f58 977 Gene3D G3DSA:3.55.50.30 41 114 1.3E-16 T 11-10-2018 AVL55_06355 4006a38e77b760bfd8c827827d779f58 977 SUPERFAMILY SSF56935 141 976 2.42E-94 T 11-10-2018 AVL55_06355 4006a38e77b760bfd8c827827d779f58 977 Pfam PF00593 TonB dependent receptor 483 975 4.2E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_06355 4006a38e77b760bfd8c827827d779f58 977 Gene3D G3DSA:2.40.170.20 440 949 3.3E-50 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_06355 4006a38e77b760bfd8c827827d779f58 977 SMART SM00965 65 116 3.8E-6 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AVL55_13525 aa67f0d8395aa99239997afc5ef1e391 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 8.7E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_13525 aa67f0d8395aa99239997afc5ef1e391 154 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 31 121 1.3E-13 T 11-10-2018 IPR031982 Type IV minor pilin ComP AVL55_13525 aa67f0d8395aa99239997afc5ef1e391 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 3.9E-8 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AVL55_13525 aa67f0d8395aa99239997afc5ef1e391 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 3.9E-8 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AVL55_13525 aa67f0d8395aa99239997afc5ef1e391 154 Gene3D G3DSA:3.30.700.10 10 154 2.8E-21 T 11-10-2018 AVL55_13525 aa67f0d8395aa99239997afc5ef1e391 154 ProSitePatterns PS00018 EF-hand calcium-binding domain. 138 150 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AVL55_13525 aa67f0d8395aa99239997afc5ef1e391 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_13525 aa67f0d8395aa99239997afc5ef1e391 154 SUPERFAMILY SSF54523 10 140 3.61E-20 T 11-10-2018 AVL55_13525 aa67f0d8395aa99239997afc5ef1e391 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 6.6E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19395 649d76bc0a86e461b6299cd987d4f713 351 SMART SM00849 89 303 0.0021 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_19395 649d76bc0a86e461b6299cd987d4f713 351 SUPERFAMILY SSF56281 74 347 3.38E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_19395 649d76bc0a86e461b6299cd987d4f713 351 Pfam PF12706 Beta-lactamase superfamily domain 102 313 2.9E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_19395 649d76bc0a86e461b6299cd987d4f713 351 Gene3D G3DSA:3.60.15.10 73 351 9.1E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_13315 be06f0691e14af8bbd7ac499fc9f9044 296 SUPERFAMILY SSF48576 1 275 1.44E-80 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AVL55_13315 be06f0691e14af8bbd7ac499fc9f9044 296 Gene3D G3DSA:1.10.600.10 2 296 6.5E-88 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AVL55_13315 be06f0691e14af8bbd7ac499fc9f9044 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AVL55_13315 be06f0691e14af8bbd7ac499fc9f9044 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AVL55_13315 be06f0691e14af8bbd7ac499fc9f9044 296 Pfam PF00348 Polyprenyl synthetase 31 268 1.3E-53 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.7E-32 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 Gene3D G3DSA:3.40.50.720 153 286 1.1E-120 T 11-10-2018 AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.1E-28 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 SUPERFAMILY SSF51735 141 305 5.17E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 SUPERFAMILY SSF50129 1 173 9.13E-54 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 4 340 6.8E-176 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.582 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 Gene3D G3DSA:3.90.180.10 20 328 1.1E-120 T 11-10-2018 AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 SMART SM00829 12 338 2.4E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_00320 14d813b46c05c018ba0879dcde4917d6 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 Gene3D G3DSA:2.40.50.140 1 106 9.0E-34 T 11-10-2018 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 Gene3D G3DSA:3.30.930.10 116 579 4.5E-195 T 11-10-2018 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 SUPERFAMILY SSF55261 288 419 3.92E-48 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 5.6E-17 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 582 33.451 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 5.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 516 530 5.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 5.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 472 488 5.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 Gene3D G3DSA:3.30.1360.30 271 420 4.5E-195 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 SUPERFAMILY SSF55681 108 580 9.59E-105 T 11-10-2018 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 4.7E-257 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 556 2.5E-108 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 SUPERFAMILY SSF50249 1 105 9.14E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_06795 e63ffe48c080e0b4247184f2b1913497 586 Pfam PF02938 GAD domain 307 406 1.4E-31 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AVL55_16225 d08f874f40afb9322ce0e67fb785a44d 103 Gene3D G3DSA:3.40.970.10 17 70 1.3E-15 T 11-10-2018 IPR037056 Ribonuclease H1, N-terminal domain superfamily AVL55_16225 d08f874f40afb9322ce0e67fb785a44d 103 SUPERFAMILY SSF55658 21 63 5.23E-12 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AVL55_16225 d08f874f40afb9322ce0e67fb785a44d 103 Pfam PF01693 Caulimovirus viroplasmin 21 61 5.5E-17 T 11-10-2018 IPR011320 Ribonuclease H1, N-terminal AVL55_11550 8dc22ae598045014917b10d4fc263e2e 246 Gene3D G3DSA:2.40.100.10 106 244 8.7E-47 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_11550 8dc22ae598045014917b10d4fc263e2e 246 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 51 231 1.3E-43 T 11-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AVL55_11550 8dc22ae598045014917b10d4fc263e2e 246 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 9 212 2.0E-51 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AVL55_11550 8dc22ae598045014917b10d4fc263e2e 246 SUPERFAMILY SSF50891 107 238 9.1E-37 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_11550 8dc22ae598045014917b10d4fc263e2e 246 SUPERFAMILY SSF160467 9 112 1.15E-11 T 11-10-2018 AVL55_11550 8dc22ae598045014917b10d4fc263e2e 246 SMART SM00796 8 222 2.0E-50 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AVL55_11550 8dc22ae598045014917b10d4fc263e2e 246 Gene3D G3DSA:3.30.1360.40 9 91 1.1E-12 T 11-10-2018 AVL55_07130 823b639262712b3c261f92206ab9964b 175 SUPERFAMILY SSF55729 6 159 9.33E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_07130 823b639262712b3c261f92206ab9964b 175 Pfam PF13302 Acetyltransferase (GNAT) domain 9 154 1.2E-24 T 11-10-2018 IPR000182 GNAT domain AVL55_07130 823b639262712b3c261f92206ab9964b 175 Gene3D G3DSA:3.40.630.30 2 174 1.6E-27 T 11-10-2018 AVL55_13365 6527df991f477cd9abaa1b7f2eab95b7 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 418 52.826 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AVL55_13365 6527df991f477cd9abaa1b7f2eab95b7 418 Gene3D G3DSA:3.90.1150.10 10 395 6.0E-186 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_13365 6527df991f477cd9abaa1b7f2eab95b7 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AVL55_13365 6527df991f477cd9abaa1b7f2eab95b7 418 Pfam PF00464 Serine hydroxymethyltransferase 9 387 7.1E-185 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AVL55_13365 6527df991f477cd9abaa1b7f2eab95b7 418 Gene3D G3DSA:3.40.640.10 37 290 6.0E-186 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_13365 6527df991f477cd9abaa1b7f2eab95b7 418 SUPERFAMILY SSF53383 6 417 1.03E-181 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_13365 6527df991f477cd9abaa1b7f2eab95b7 418 PIRSF PIRSF000412 1 418 6.7E-169 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 Pfam PF00672 HAMP domain 306 355 2.2E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 SMART SM00283 374 635 1.0E-69 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 SUPERFAMILY SSF58104 327 636 1.31E-73 T 11-10-2018 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 Gene3D G3DSA:1.10.287.950 305 636 3.1E-72 T 11-10-2018 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 Gene3D G3DSA:3.30.450.20 165 287 1.2E-22 T 11-10-2018 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 282 302 1.1E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 549 578 1.1E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 501 530 1.1E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 499 1.1E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 Pfam PF02743 Cache domain 44 267 7.4E-18 T 11-10-2018 IPR033479 Double Cache domain 1 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 601 6.0E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_01665 4250b60644407b14723089cbf1eaf1b8 636 SMART SM00304 305 359 6.9E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 Pfam PF00248 Aldo/keto reductase family 7 251 9.4E-50 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 PRINTS PR00069 Aldo-keto reductase signature 26 50 3.9E-47 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 PRINTS PR00069 Aldo-keto reductase signature 187 211 3.9E-47 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 PRINTS PR00069 Aldo-keto reductase signature 150 179 3.9E-47 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 PRINTS PR00069 Aldo-keto reductase signature 82 100 3.9E-47 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 PRINTS PR00069 Aldo-keto reductase signature 115 132 3.9E-47 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 SUPERFAMILY SSF51430 3 262 1.83E-80 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 PIRSF PIRSF000097 1 267 8.7E-66 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 Gene3D G3DSA:3.20.20.100 1 263 1.2E-88 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_07315 42e4a3a3945dd3ecbe9c23945772f798 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 30 47 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AVL55_16580 bbfbbc5fa6f59c1a96b7e4040015802d 232 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 30 225 2.2E-51 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16580 bbfbbc5fa6f59c1a96b7e4040015802d 232 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 138 213 3.1E-18 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16580 bbfbbc5fa6f59c1a96b7e4040015802d 232 SUPERFAMILY SSF49503 114 228 2.54E-45 T 11-10-2018 IPR008972 Cupredoxin AVL55_16580 bbfbbc5fa6f59c1a96b7e4040015802d 232 Gene3D G3DSA:2.60.40.2600 113 232 2.2E-48 T 11-10-2018 AVL55_16580 bbfbbc5fa6f59c1a96b7e4040015802d 232 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 161 209 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_00555 9a7ff86bba7dbdb4f57dc252ba372d94 223 SUPERFAMILY SSF53474 11 222 8.61E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_00555 9a7ff86bba7dbdb4f57dc252ba372d94 223 Gene3D G3DSA:3.40.50.1820 2 223 3.0E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_00555 9a7ff86bba7dbdb4f57dc252ba372d94 223 Pfam PF02230 Phospholipase/Carboxylesterase 12 221 2.2E-56 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AVL55_08285 3aba303ec553fab913fed9746fc60cf9 336 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 335 45.339 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AVL55_08285 3aba303ec553fab913fed9746fc60cf9 336 Gene3D G3DSA:3.20.20.300 1 326 4.0E-107 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AVL55_08285 3aba303ec553fab913fed9746fc60cf9 336 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 11 284 2.0E-73 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AVL55_08285 3aba303ec553fab913fed9746fc60cf9 336 SUPERFAMILY SSF51445 4 283 6.0E-76 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_12475 1d4128215f0e8a675fae399fa4c74fbc 527 Pfam PF00245 Alkaline phosphatase 54 524 1.9E-119 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12475 1d4128215f0e8a675fae399fa4c74fbc 527 SUPERFAMILY SSF53649 38 524 1.32E-150 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AVL55_12475 1d4128215f0e8a675fae399fa4c74fbc 527 PRINTS PR00113 Alkaline phosphatase signature 54 74 4.1E-41 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12475 1d4128215f0e8a675fae399fa4c74fbc 527 PRINTS PR00113 Alkaline phosphatase signature 110 125 4.1E-41 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12475 1d4128215f0e8a675fae399fa4c74fbc 527 PRINTS PR00113 Alkaline phosphatase signature 157 177 4.1E-41 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12475 1d4128215f0e8a675fae399fa4c74fbc 527 PRINTS PR00113 Alkaline phosphatase signature 322 351 4.1E-41 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12475 1d4128215f0e8a675fae399fa4c74fbc 527 Gene3D G3DSA:3.40.720.10 24 527 2.1E-177 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AVL55_12475 1d4128215f0e8a675fae399fa4c74fbc 527 SMART SM00098 55 525 6.4E-146 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_03745 3afa911b67066406df982a17f7de19b1 1106 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 2 229 2.0E-31 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AVL55_03745 3afa911b67066406df982a17f7de19b1 1106 Gene3D G3DSA:3.40.50.300 289 512 1.1E-41 T 11-10-2018 AVL55_03745 3afa911b67066406df982a17f7de19b1 1106 Gene3D G3DSA:3.90.1570.50 84 283 1.3E-17 T 11-10-2018 AVL55_03745 3afa911b67066406df982a17f7de19b1 1106 Pfam PF04851 Type III restriction enzyme, res subunit 290 492 4.1E-17 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AVL55_03745 3afa911b67066406df982a17f7de19b1 1106 SUPERFAMILY SSF52540 254 499 3.83E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_03745 3afa911b67066406df982a17f7de19b1 1106 SMART SM00487 286 518 5.6E-7 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_03745 3afa911b67066406df982a17f7de19b1 1106 Gene3D G3DSA:3.40.50.300 521 778 2.6E-39 T 11-10-2018 AVL55_03745 3afa911b67066406df982a17f7de19b1 1106 Pfam PF11867 Domain of unknown function (DUF3387) 779 995 3.0E-8 T 11-10-2018 IPR021810 Protein of unknown function DUF3387 AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 Gene3D G3DSA:3.40.50.720 1 245 1.4E-86 T 11-10-2018 AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 2.1E-4 T 11-10-2018 AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 244 4.3E-103 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.8E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.8E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.8E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.8E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.8E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.8E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 3.6E-69 T 11-10-2018 AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 SUPERFAMILY SSF51735 5 245 1.3E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.8E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.8E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08680 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.8E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_17535 12be8f6e8b0b16cd0fffe05a8f8ce1fb 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.2E-42 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17535 12be8f6e8b0b16cd0fffe05a8f8ce1fb 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.133 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17535 12be8f6e8b0b16cd0fffe05a8f8ce1fb 117 SUPERFAMILY SSF53137 3 115 5.01E-53 T 11-10-2018 AVL55_17535 12be8f6e8b0b16cd0fffe05a8f8ce1fb 117 Gene3D G3DSA:3.30.420.100 1 117 4.3E-45 T 11-10-2018 AVL55_17535 12be8f6e8b0b16cd0fffe05a8f8ce1fb 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 3.8E-43 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 PRINTS PR00148 Enolase signature 37 51 2.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 PRINTS PR00148 Enolase signature 165 178 2.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 PRINTS PR00148 Enolase signature 367 384 2.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 PRINTS PR00148 Enolase signature 315 326 2.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 PRINTS PR00148 Enolase signature 338 352 2.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 PRINTS PR00148 Enolase signature 107 123 2.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 Gene3D G3DSA:3.20.20.120 128 430 1.5E-136 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 SMART SM01192 143 429 6.8E-220 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 Pfam PF03952 Enolase, N-terminal domain 4 134 1.6E-59 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 Hamap MF_00318 Enolase [eno]. 2 415 44.773 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 SUPERFAMILY SSF54826 3 138 8.31E-57 T 11-10-2018 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 SUPERFAMILY SSF51604 143 426 2.26E-129 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 PIRSF PIRSF001400 1 429 1.5E-194 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 SMART SM01193 4 134 1.3E-92 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 ProSitePatterns PS00164 Enolase signature. 338 351 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 Gene3D G3DSA:3.30.390.10 1 127 2.2E-57 T 11-10-2018 IPR029017 Enolase-like, N-terminal AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 428 7.7E-140 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_04430 3cbd82aeb4a15f0d39e4ee44f66d685b 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 2.5E-207 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AVL55_03515 76ab3a5bab17fcbe1ade4aa681118930 210 SUPERFAMILY SSF52833 7 90 4.07E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_03515 76ab3a5bab17fcbe1ade4aa681118930 210 SUPERFAMILY SSF47616 82 205 7.67E-26 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_03515 76ab3a5bab17fcbe1ade4aa681118930 210 Gene3D G3DSA:3.40.30.10 11 200 9.7E-80 T 11-10-2018 AVL55_03515 76ab3a5bab17fcbe1ade4aa681118930 210 Gene3D G3DSA:1.20.1050.10 89 192 9.7E-80 T 11-10-2018 AVL55_03515 76ab3a5bab17fcbe1ade4aa681118930 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 192 2.7E-11 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AVL55_03515 76ab3a5bab17fcbe1ade4aa681118930 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 7.7E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 Gene3D G3DSA:3.40.50.300 94 382 2.5E-130 T 11-10-2018 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.106 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.2E-13 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 9.3E-254 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 Gene3D G3DSA:1.20.150.20 383 513 6.0E-47 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 Gene3D G3DSA:2.40.30.20 1 93 3.3E-30 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 SUPERFAMILY SSF52540 96 381 1.95E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 SUPERFAMILY SSF47917 383 511 1.07E-45 T 11-10-2018 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.4E-44 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.2E-72 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_20005 b39183d771959d3eef584c6b4b96fad3 513 SUPERFAMILY SSF50615 10 94 4.32E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_17700 4bfd0743247a0399c03e380514ed550b 233 SUPERFAMILY SSF48150 42 188 9.89E-39 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AVL55_17700 4bfd0743247a0399c03e380514ed550b 233 Pfam PF03352 Methyladenine glycosylase 46 141 5.3E-16 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AVL55_17700 4bfd0743247a0399c03e380514ed550b 233 Gene3D G3DSA:1.10.340.30 39 168 4.5E-19 T 11-10-2018 AVL55_02190 78ab931b689daf947fa9438f389e4d3e 632 SMART SM00267 452 626 7.1E-64 T 11-10-2018 IPR000160 GGDEF domain AVL55_02190 78ab931b689daf947fa9438f389e4d3e 632 SUPERFAMILY SSF55073 468 624 1.18E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_02190 78ab931b689daf947fa9438f389e4d3e 632 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 622 1.0E-43 T 11-10-2018 IPR000160 GGDEF domain AVL55_02190 78ab931b689daf947fa9438f389e4d3e 632 Pfam PF07696 7TMR-DISM extracellular 2 45 179 2.8E-21 T 11-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AVL55_02190 78ab931b689daf947fa9438f389e4d3e 632 Gene3D G3DSA:3.30.70.270 449 625 2.2E-55 T 11-10-2018 AVL55_02190 78ab931b689daf947fa9438f389e4d3e 632 Pfam PF07695 7TM diverse intracellular signalling 191 392 1.8E-36 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AVL55_02190 78ab931b689daf947fa9438f389e4d3e 632 Gene3D G3DSA:2.60.40.2380 39 187 1.0E-16 T 11-10-2018 AVL55_02190 78ab931b689daf947fa9438f389e4d3e 632 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 459 624 5.4E-49 T 11-10-2018 IPR000160 GGDEF domain AVL55_03765 e226a6a103c5e6300c651eb39cceb31c 441 SUPERFAMILY SSF116734 7 209 4.41E-28 T 11-10-2018 AVL55_03765 e226a6a103c5e6300c651eb39cceb31c 441 Gene3D G3DSA:3.90.220.20 244 393 1.7E-63 T 11-10-2018 AVL55_03765 e226a6a103c5e6300c651eb39cceb31c 441 Gene3D G3DSA:3.90.220.20 8 440 1.7E-63 T 11-10-2018 AVL55_03765 e226a6a103c5e6300c651eb39cceb31c 441 Pfam PF01420 Type I restriction modification DNA specificity domain 240 424 2.2E-12 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AVL55_03765 e226a6a103c5e6300c651eb39cceb31c 441 Pfam PF01420 Type I restriction modification DNA specificity domain 8 183 7.9E-10 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AVL55_03765 e226a6a103c5e6300c651eb39cceb31c 441 SUPERFAMILY SSF116734 227 440 7.19E-40 T 11-10-2018 AVL55_03765 e226a6a103c5e6300c651eb39cceb31c 441 Gene3D G3DSA:1.10.287.1120 159 436 1.7E-63 T 11-10-2018 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 Gene3D G3DSA:3.90.190.20 316 456 8.8E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 Gene3D G3DSA:3.40.1390.10 1 82 2.5E-22 T 11-10-2018 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 SUPERFAMILY SSF63418 1 96 1.83E-23 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 SUPERFAMILY SSF53623 103 312 7.72E-54 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 453 33.004 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 451 4.8E-137 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 SUPERFAMILY SSF53244 317 451 3.02E-33 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 Pfam PF01225 Mur ligase family, catalytic domain 26 93 7.3E-9 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 391 1.7E-13 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 Pfam PF08245 Mur ligase middle domain 107 296 2.5E-48 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AVL55_15255 8f0e3eb6f3e10d7d28f28067160bc9a4 469 Gene3D G3DSA:3.40.1190.10 83 315 5.8E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_08185 cb8a053af79168a278e6a82f2bb5a0e5 288 SUPERFAMILY SSF53448 5 205 2.57E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_08185 cb8a053af79168a278e6a82f2bb5a0e5 288 Pfam PF00535 Glycosyl transferase family 2 6 118 1.5E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_08185 cb8a053af79168a278e6a82f2bb5a0e5 288 Gene3D G3DSA:3.90.550.10 2 246 8.8E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_07905 953c7d816576dc8801b1c6b0b979a9f0 163 Gene3D G3DSA:1.10.150.120 76 151 1.3E-23 T 11-10-2018 AVL55_07905 953c7d816576dc8801b1c6b0b979a9f0 163 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 58 2.6E-6 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AVL55_07905 953c7d816576dc8801b1c6b0b979a9f0 163 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AVL55_07905 953c7d816576dc8801b1c6b0b979a9f0 163 Gene3D G3DSA:3.10.20.30 1 75 5.8E-25 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_07905 953c7d816576dc8801b1c6b0b979a9f0 163 SUPERFAMILY SSF47741 76 146 4.45E-28 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AVL55_07905 953c7d816576dc8801b1c6b0b979a9f0 163 Pfam PF01799 [2Fe-2S] binding domain 72 142 1.7E-24 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AVL55_07905 953c7d816576dc8801b1c6b0b979a9f0 163 SUPERFAMILY SSF54292 2 77 1.97E-22 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 150 8.1E-63 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 199 208 1.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 155 168 1.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 136 152 1.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 171 184 1.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 90 101 1.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 115 133 1.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 SUPERFAMILY SSF52096 6 317 5.33E-102 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 318 50.169 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 1.2E-160 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04765 65280a94db61ff1bd534e52fdb9d2811 318 Gene3D G3DSA:3.90.226.10 2 317 1.6E-116 T 11-10-2018 AVL55_12900 5a864a3fddc3c9151fd98c77a48ce128 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 11-10-2018 IPR020845 AMP-binding, conserved site AVL55_12900 5a864a3fddc3c9151fd98c77a48ce128 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 542 4.6E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AVL55_12900 5a864a3fddc3c9151fd98c77a48ce128 550 SUPERFAMILY SSF56801 21 550 1.57E-149 T 11-10-2018 AVL55_12900 5a864a3fddc3c9151fd98c77a48ce128 550 Gene3D G3DSA:3.30.300.310 456 550 3.2E-30 T 11-10-2018 AVL55_12900 5a864a3fddc3c9151fd98c77a48ce128 550 Gene3D G3DSA:3.40.50.12780 12 455 1.6E-119 T 11-10-2018 AVL55_12900 5a864a3fddc3c9151fd98c77a48ce128 550 Pfam PF00501 AMP-binding enzyme 29 459 4.3E-112 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AVL55_10975 4037a20cc6ea3b043653456bd88b3cbb 930 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 9 179 8.3E-38 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region AVL55_10975 4037a20cc6ea3b043653456bd88b3cbb 930 SUPERFAMILY SSF52540 517 828 5.65E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_10975 4037a20cc6ea3b043653456bd88b3cbb 930 SUPERFAMILY SSF46785 862 927 1.9E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_10975 4037a20cc6ea3b043653456bd88b3cbb 930 Gene3D G3DSA:3.30.980.40 436 540 8.1E-34 T 11-10-2018 AVL55_10975 4037a20cc6ea3b043653456bd88b3cbb 930 Gene3D G3DSA:3.40.50.300 541 843 2.1E-122 T 11-10-2018 AVL55_10975 4037a20cc6ea3b043653456bd88b3cbb 930 Gene3D G3DSA:1.10.10.10 866 929 5.9E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_10975 4037a20cc6ea3b043653456bd88b3cbb 930 Pfam PF09397 Ftsk gamma domain 864 924 7.1E-26 T 11-10-2018 IPR018541 FtsK gamma domain AVL55_10975 4037a20cc6ea3b043653456bd88b3cbb 930 SMART SM00843 862 927 2.5E-39 T 11-10-2018 IPR018541 FtsK gamma domain AVL55_10975 4037a20cc6ea3b043653456bd88b3cbb 930 Pfam PF01580 FtsK/SpoIIIE family 544 757 8.8E-71 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 388 39.933 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 Pfam PF00162 Phosphoglycerate kinase 6 378 1.7E-146 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PIRSF PIRSF000724 1 391 3.0E-141 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 1.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 1.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 1.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 Gene3D G3DSA:3.40.50.1260 8 386 2.3E-156 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 Gene3D G3DSA:3.40.50.1260 165 378 2.3E-156 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 SUPERFAMILY SSF53748 4 388 4.12E-149 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03930 8be43cb30cd0a581f971d1b72e2f6fcf 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 SUPERFAMILY SSF53092 1 175 1.62E-44 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 128 1.2E-33 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 Gene3D G3DSA:3.40.350.10 2 172 1.7E-49 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 SUPERFAMILY SSF55920 176 437 6.28E-86 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 SMART SM01011 2 138 9.8E-47 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 Pfam PF00557 Metallopeptidase family M24 182 413 8.6E-67 T 11-10-2018 IPR000994 Peptidase M24 AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 PRINTS PR00599 Methionine aminopeptidase-1 signature 372 384 1.5E-5 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 PRINTS PR00599 Methionine aminopeptidase-1 signature 254 270 1.5E-5 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AVL55_15025 a0f681d59236de75969e6d670fa63a7e 439 Gene3D G3DSA:3.90.230.10 173 439 1.2E-101 T 11-10-2018 AVL55_19405 ab9718e312dc3440b4e3e120843a65f9 181 SUPERFAMILY SSF52972 5 179 1.09E-50 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AVL55_19405 ab9718e312dc3440b4e3e120843a65f9 181 Pfam PF01931 Protein of unknown function DUF84 9 173 1.7E-51 T 11-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AVL55_19405 ab9718e312dc3440b4e3e120843a65f9 181 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 179 1.1E-34 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase AVL55_19405 ab9718e312dc3440b4e3e120843a65f9 181 Gene3D G3DSA:3.90.950.10 1 181 1.7E-50 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 4 332 41.686 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 Gene3D G3DSA:3.40.50.620 7 330 2.9E-140 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 Gene3D G3DSA:1.10.240.10 187 299 2.9E-140 T 11-10-2018 AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 SUPERFAMILY SSF52374 6 331 1.31E-99 T 11-10-2018 AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 331 1.7E-114 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 Pfam PF00579 tRNA synthetases class I (W and Y) 4 286 7.7E-82 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.8E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 17 33 2.8E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 143 164 2.8E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AVL55_01875 36fb06e8e7e24d99363b2be14f7b58bc 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 196 206 2.8E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AVL55_13825 2a0421a3af52d34a11c139fcf9449b81 478 SUPERFAMILY SSF101960 33 475 2.35E-140 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AVL55_13825 2a0421a3af52d34a11c139fcf9449b81 478 Pfam PF01458 Uncharacterized protein family (UPF0051) 217 449 2.1E-66 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AVL55_13825 2a0421a3af52d34a11c139fcf9449b81 478 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 12 469 7.8E-196 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AVL55_06835 a90f99533decf880a109cab1c90982ca 297 Pfam PF06519 TolA C-terminal 202 295 9.2E-32 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AVL55_06835 a90f99533decf880a109cab1c90982ca 297 SUPERFAMILY SSF74653 211 296 3.34E-20 T 11-10-2018 AVL55_06835 a90f99533decf880a109cab1c90982ca 297 Gene3D G3DSA:3.30.1150.10 200 296 1.8E-29 T 11-10-2018 AVL55_06835 a90f99533decf880a109cab1c90982ca 297 TIGRFAM TIGR02794 tolA_full: protein TolA 95 296 3.3E-38 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AVL55_05790 0d1f8925f11132c6a1992ef45c0da616 607 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 6 600 3.7E-225 T 11-10-2018 IPR022458 Conjugative coupling factor TraG/TraD AVL55_05790 0d1f8925f11132c6a1992ef45c0da616 607 Gene3D G3DSA:3.40.50.300 386 605 2.6E-27 T 11-10-2018 AVL55_05790 0d1f8925f11132c6a1992ef45c0da616 607 Gene3D G3DSA:3.40.50.300 105 288 1.7E-13 T 11-10-2018 AVL55_05790 0d1f8925f11132c6a1992ef45c0da616 607 Pfam PF12696 TraM recognition site of TraD and TraG 452 578 2.6E-12 T 11-10-2018 IPR032689 TraD/TraG, TraM recognition site AVL55_05790 0d1f8925f11132c6a1992ef45c0da616 607 SUPERFAMILY SSF52540 130 594 1.88E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05790 0d1f8925f11132c6a1992ef45c0da616 607 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 154 288 6.6E-10 T 11-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AVL55_04365 2042debc696e37a15743d33db13cf97c 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 6 193 3.2E-64 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AVL55_04365 2042debc696e37a15743d33db13cf97c 200 Pfam PF01725 Ham1 family 7 192 2.0E-57 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AVL55_04365 2042debc696e37a15743d33db13cf97c 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 5 197 49.171 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 AVL55_04365 2042debc696e37a15743d33db13cf97c 200 Gene3D G3DSA:3.90.950.10 1 198 7.1E-77 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AVL55_04365 2042debc696e37a15743d33db13cf97c 200 SUPERFAMILY SSF52972 5 195 1.18E-71 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AVL55_02155 687e9acc65c8faee6a61dc1f1a9f3e7c 165 SUPERFAMILY SSF55021 79 163 3.07E-24 T 11-10-2018 AVL55_02155 687e9acc65c8faee6a61dc1f1a9f3e7c 165 SUPERFAMILY SSF55021 2 76 4.58E-22 T 11-10-2018 AVL55_02155 687e9acc65c8faee6a61dc1f1a9f3e7c 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-33 T 11-10-2018 AVL55_02155 687e9acc65c8faee6a61dc1f1a9f3e7c 165 Pfam PF13710 ACT domain 11 73 1.7E-16 T 11-10-2018 AVL55_02155 687e9acc65c8faee6a61dc1f1a9f3e7c 165 Pfam PF10369 Small subunit of acetolactate synthase 84 159 3.1E-23 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AVL55_02155 687e9acc65c8faee6a61dc1f1a9f3e7c 165 Gene3D G3DSA:3.30.70.260 1 78 8.8E-34 T 11-10-2018 AVL55_02155 687e9acc65c8faee6a61dc1f1a9f3e7c 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 160 7.9E-59 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AVL55_02155 687e9acc65c8faee6a61dc1f1a9f3e7c 165 Gene3D G3DSA:3.30.70.1150 80 158 1.9E-25 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AVL55_02220 65f3a49de968f01ff0167cdcbb34a584 432 Pfam PF01546 Peptidase family M20/M25/M40 95 424 1.8E-31 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AVL55_02220 65f3a49de968f01ff0167cdcbb34a584 432 Gene3D G3DSA:3.40.630.10 37 412 1.1E-134 T 11-10-2018 AVL55_02220 65f3a49de968f01ff0167cdcbb34a584 432 Gene3D G3DSA:3.30.70.360 218 335 1.1E-134 T 11-10-2018 AVL55_02220 65f3a49de968f01ff0167cdcbb34a584 432 Pfam PF07687 Peptidase dimerisation domain 223 318 4.3E-11 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AVL55_02220 65f3a49de968f01ff0167cdcbb34a584 432 SUPERFAMILY SSF53187 27 430 1.69E-85 T 11-10-2018 AVL55_02220 65f3a49de968f01ff0167cdcbb34a584 432 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 38 417 4.4E-108 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AVL55_02220 65f3a49de968f01ff0167cdcbb34a584 432 SUPERFAMILY SSF55031 221 327 4.84E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AVL55_02220 65f3a49de968f01ff0167cdcbb34a584 432 PIRSF PIRSF005962 21 432 1.3E-119 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AVL55_00200 741bc13c442d930851f50aff8446a4db 1029 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 973 6.3E-157 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00200 741bc13c442d930851f50aff8446a4db 1029 SUPERFAMILY SSF89550 10 67 5.89E-6 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AVL55_00200 741bc13c442d930851f50aff8446a4db 1029 Pfam PF14579 Helix-hairpin-helix motif 770 855 8.2E-16 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00200 741bc13c442d930851f50aff8446a4db 1029 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1029 12.811 T 11-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_00200 741bc13c442d930851f50aff8446a4db 1029 Pfam PF01336 OB-fold nucleic acid binding domain 938 1010 1.2E-6 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AVL55_00200 741bc13c442d930851f50aff8446a4db 1029 SMART SM00481 4 65 0.0014 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AVL55_00200 741bc13c442d930851f50aff8446a4db 1029 Gene3D G3DSA:3.20.20.140 1 247 3.1E-35 T 11-10-2018 AVL55_00200 741bc13c442d930851f50aff8446a4db 1029 Pfam PF02811 PHP domain 8 99 2.7E-8 T 11-10-2018 IPR004013 PHP domain GO:0003824 AVL55_00200 741bc13c442d930851f50aff8446a4db 1029 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 695 7.0E-144 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_02175 d1950e139727d3fea83b3d16a6ca48f5 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 83 101 5.5E-48 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AVL55_02175 d1950e139727d3fea83b3d16a6ca48f5 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 6 33 5.5E-48 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AVL55_02175 d1950e139727d3fea83b3d16a6ca48f5 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 101 127 5.5E-48 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AVL55_02175 d1950e139727d3fea83b3d16a6ca48f5 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 152 180 5.5E-48 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AVL55_02175 d1950e139727d3fea83b3d16a6ca48f5 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 237 15.967 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AVL55_02175 d1950e139727d3fea83b3d16a6ca48f5 251 ProSitePatterns PS01218 TatC family signature. 152 171 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AVL55_02175 d1950e139727d3fea83b3d16a6ca48f5 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 219 2.4E-64 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AVL55_02175 d1950e139727d3fea83b3d16a6ca48f5 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 7 224 3.3E-73 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AVL55_07930 3cdb2ef8f2aaf0a477526f11b78c8034 430 Pfam PF01979 Amidohydrolase family 63 421 1.1E-58 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AVL55_07930 3cdb2ef8f2aaf0a477526f11b78c8034 430 SUPERFAMILY SSF51338 21 80 1.51E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_07930 3cdb2ef8f2aaf0a477526f11b78c8034 430 Gene3D G3DSA:3.20.20.140 66 383 9.8E-165 T 11-10-2018 AVL55_07930 3cdb2ef8f2aaf0a477526f11b78c8034 430 Gene3D G3DSA:2.30.40.10 5 419 9.8E-165 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_07930 3cdb2ef8f2aaf0a477526f11b78c8034 430 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 23 421 2.8E-163 T 11-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 AVL55_07930 3cdb2ef8f2aaf0a477526f11b78c8034 430 SUPERFAMILY SSF51556 65 368 4.81E-91 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_03850 943f087b8d1baf058fa7a2d435f92815 633 SMART SM00052 375 622 1.5E-82 T 11-10-2018 IPR001633 EAL domain AVL55_03850 943f087b8d1baf058fa7a2d435f92815 633 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 193 362 3.1E-37 T 11-10-2018 IPR000160 GGDEF domain AVL55_03850 943f087b8d1baf058fa7a2d435f92815 633 SMART SM00267 185 365 1.8E-53 T 11-10-2018 IPR000160 GGDEF domain AVL55_03850 943f087b8d1baf058fa7a2d435f92815 633 SUPERFAMILY SSF55073 201 367 4.0E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_03850 943f087b8d1baf058fa7a2d435f92815 633 SUPERFAMILY SSF141868 380 629 8.63E-74 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_03850 943f087b8d1baf058fa7a2d435f92815 633 Pfam PF00563 EAL domain 383 617 9.9E-63 T 11-10-2018 IPR001633 EAL domain AVL55_03850 943f087b8d1baf058fa7a2d435f92815 633 Gene3D G3DSA:3.30.70.270 191 376 1.6E-52 T 11-10-2018 AVL55_03850 943f087b8d1baf058fa7a2d435f92815 633 Pfam PF00990 Diguanylate cyclase, GGDEF domain 196 360 4.4E-43 T 11-10-2018 IPR000160 GGDEF domain AVL55_03850 943f087b8d1baf058fa7a2d435f92815 633 Gene3D G3DSA:3.20.20.450 377 632 4.3E-80 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_17580 6b5a53e65365592bfc4075a23d215d7d 246 SUPERFAMILY SSF55315 2 78 2.59E-18 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AVL55_17580 6b5a53e65365592bfc4075a23d215d7d 246 Gene3D G3DSA:3.40.1280.10 80 245 1.2E-63 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AVL55_17580 6b5a53e65365592bfc4075a23d215d7d 246 SUPERFAMILY SSF75217 70 244 1.11E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AVL55_17580 6b5a53e65365592bfc4075a23d215d7d 246 Pfam PF00588 SpoU rRNA Methylase family 98 238 5.0E-41 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AVL55_17580 6b5a53e65365592bfc4075a23d215d7d 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 80 1.0E-16 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AVL55_17580 6b5a53e65365592bfc4075a23d215d7d 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 244 6.6E-82 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AVL55_17580 6b5a53e65365592bfc4075a23d215d7d 246 Gene3D G3DSA:3.30.1330.30 1 78 5.2E-26 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AVL55_17580 6b5a53e65365592bfc4075a23d215d7d 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 43.739 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AVL55_17580 6b5a53e65365592bfc4075a23d215d7d 246 SMART SM00967 6 82 3.2E-16 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 Pfam PF01464 Transglycosylase SLT domain 145 250 6.2E-24 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 Pfam PF01476 LysM domain 443 486 5.6E-15 T 11-10-2018 IPR018392 LysM domain AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 Pfam PF01476 LysM domain 501 543 6.7E-13 T 11-10-2018 IPR018392 LysM domain AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 Pfam PF01476 LysM domain 369 411 1.3E-11 T 11-10-2018 IPR018392 LysM domain AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 SUPERFAMILY SSF54106 441 486 1.24E-12 T 11-10-2018 AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 Gene3D G3DSA:3.10.350.10 497 546 2.2E-15 T 11-10-2018 IPR036779 LysM domain superfamily AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 SMART SM00257 442 486 1.0E-15 T 11-10-2018 IPR018392 LysM domain AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 SMART SM00257 368 411 6.7E-14 T 11-10-2018 IPR018392 LysM domain AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 SMART SM00257 500 544 3.3E-12 T 11-10-2018 IPR018392 LysM domain AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 Gene3D G3DSA:3.10.350.10 429 494 1.4E-17 T 11-10-2018 IPR036779 LysM domain superfamily AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 Gene3D G3DSA:3.10.350.10 356 418 1.9E-14 T 11-10-2018 IPR036779 LysM domain superfamily AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 SUPERFAMILY SSF54106 499 545 1.44E-10 T 11-10-2018 AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 157 185 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 SUPERFAMILY SSF53955 136 285 1.58E-44 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 SUPERFAMILY SSF54106 366 411 1.57E-10 T 11-10-2018 AVL55_12450 524f0e79bf97fd6b22d53edd60e38a71 554 Gene3D G3DSA:1.10.530.10 132 286 1.8E-32 T 11-10-2018 AVL55_06155 aca6b26055693024dd5cc7382abf3cde 188 Pfam PF03358 NADPH-dependent FMN reductase 2 153 1.1E-40 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AVL55_06155 aca6b26055693024dd5cc7382abf3cde 188 SUPERFAMILY SSF52218 3 182 5.76E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_06155 aca6b26055693024dd5cc7382abf3cde 188 Gene3D G3DSA:3.40.50.360 1 188 1.4E-52 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_10905 c71d3dcae96b384404fe9fd3fffc66a9 488 Pfam PF11840 Protein of unknown function (DUF3360) 3 483 3.6E-248 T 11-10-2018 IPR021794 Protein of unknown function DUF3360 AVL55_15095 ae992c780cad1814c9f6901aa125148f 236 Gene3D G3DSA:3.30.70.2970 50 166 1.3E-9 T 11-10-2018 AVL55_15095 ae992c780cad1814c9f6901aa125148f 236 Gene3D G3DSA:3.30.110.170 40 208 1.3E-9 T 11-10-2018 AVL55_15095 ae992c780cad1814c9f6901aa125148f 236 Pfam PF04402 Protein of unknown function (DUF541) 38 210 3.9E-17 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AVL55_15095 ae992c780cad1814c9f6901aa125148f 236 PIRSF PIRSF029033 1 236 7.6E-95 T 11-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AVL55_02615 c1c462cf26b59af43fd8b03de697fc1b 361 SUPERFAMILY SSF55120 7 352 2.01E-91 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_02615 c1c462cf26b59af43fd8b03de697fc1b 361 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 15 247 2.4E-59 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_02615 c1c462cf26b59af43fd8b03de697fc1b 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 11 173 1.3E-39 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_02615 c1c462cf26b59af43fd8b03de697fc1b 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 199 350 1.0E-20 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_02615 c1c462cf26b59af43fd8b03de697fc1b 361 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 7 356 25.763 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_02615 c1c462cf26b59af43fd8b03de697fc1b 361 Gene3D G3DSA:3.30.2350.20 19 350 2.1E-111 T 11-10-2018 AVL55_02615 c1c462cf26b59af43fd8b03de697fc1b 361 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 79 92 - T 11-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AVL55_02615 c1c462cf26b59af43fd8b03de697fc1b 361 Gene3D G3DSA:3.30.2340.10 179 316 2.1E-111 T 11-10-2018 AVL55_08620 7c0ecb41a20c9cef01ec8f8cd2b858f1 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 9.2E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_08620 7c0ecb41a20c9cef01ec8f8cd2b858f1 225 SUPERFAMILY SSF52172 1 175 7.83E-27 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_08620 7c0ecb41a20c9cef01ec8f8cd2b858f1 225 SMART SM00862 147 221 4.3E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_08620 7c0ecb41a20c9cef01ec8f8cd2b858f1 225 Pfam PF00072 Response regulator receiver domain 3 112 6.3E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08620 7c0ecb41a20c9cef01ec8f8cd2b858f1 225 Gene3D G3DSA:1.10.10.10 118 225 6.5E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_08620 7c0ecb41a20c9cef01ec8f8cd2b858f1 225 Gene3D G3DSA:3.40.50.2300 1 117 4.4E-25 T 11-10-2018 AVL55_08620 7c0ecb41a20c9cef01ec8f8cd2b858f1 225 SMART SM00448 1 112 4.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02665 b54cea0143274d20c9195603166f9932 484 SUPERFAMILY SSF56954 5 481 4.45E-78 T 11-10-2018 AVL55_02665 b54cea0143274d20c9195603166f9932 484 Pfam PF02321 Outer membrane efflux protein 297 479 1.2E-18 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_02665 b54cea0143274d20c9195603166f9932 484 Pfam PF02321 Outer membrane efflux protein 79 272 1.6E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_02665 b54cea0143274d20c9195603166f9932 484 Gene3D G3DSA:2.20.200.10 111 366 6.8E-87 T 11-10-2018 AVL55_02665 b54cea0143274d20c9195603166f9932 484 Gene3D G3DSA:1.20.1600.10 73 479 6.8E-87 T 11-10-2018 AVL55_02665 b54cea0143274d20c9195603166f9932 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 481 1.3E-69 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AVL55_07805 866ac844dfd66ace00e3037058dac5a8 129 PIRSF PIRSF008459 2 128 3.6E-36 T 11-10-2018 IPR016540 Uncharacterised conserved protein UCP008459 AVL55_07805 866ac844dfd66ace00e3037058dac5a8 129 Pfam PF13840 ACT domain 58 119 2.3E-17 T 11-10-2018 IPR027795 CASTOR, ACT domain AVL55_07805 866ac844dfd66ace00e3037058dac5a8 129 SUPERFAMILY SSF55021 61 122 6.87E-17 T 11-10-2018 AVL55_07805 866ac844dfd66ace00e3037058dac5a8 129 Gene3D G3DSA:3.30.2130.10 1 129 2.1E-35 T 11-10-2018 AVL55_07805 866ac844dfd66ace00e3037058dac5a8 129 SUPERFAMILY SSF55021 1 51 1.69E-11 T 11-10-2018 AVL55_18080 a4a02a3b3f5108d7d283a8f6038c09f2 116 Pfam PF11804 Protein of unknown function (DUF3325) 9 106 4.6E-14 T 11-10-2018 IPR021762 Protein of unknown function DUF3325 AVL55_02525 33bb884421004450d00d50e851648181 716 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 220 3.3E-37 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AVL55_02525 33bb884421004450d00d50e851648181 716 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 3.4E-23 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_02525 33bb884421004450d00d50e851648181 716 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 694 3.3E-5 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_02525 33bb884421004450d00d50e851648181 716 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AVL55_02525 33bb884421004450d00d50e851648181 716 Gene3D G3DSA:1.10.1040.50 498 710 1.5E-70 T 11-10-2018 AVL55_02525 33bb884421004450d00d50e851648181 716 SUPERFAMILY SSF51735 318 496 1.49E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_02525 33bb884421004450d00d50e851648181 716 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 495 7.7E-60 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_02525 33bb884421004450d00d50e851648181 716 Gene3D G3DSA:3.90.226.10 1 312 2.5E-95 T 11-10-2018 AVL55_02525 33bb884421004450d00d50e851648181 716 SUPERFAMILY SSF48179 496 617 7.99E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_02525 33bb884421004450d00d50e851648181 716 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_02525 33bb884421004450d00d50e851648181 716 SUPERFAMILY SSF48179 625 715 3.57E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_02525 33bb884421004450d00d50e851648181 716 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_02525 33bb884421004450d00d50e851648181 716 SUPERFAMILY SSF52096 2 304 5.14E-69 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_02525 33bb884421004450d00d50e851648181 716 Gene3D G3DSA:3.40.50.720 315 497 3.7E-65 T 11-10-2018 AVL55_05475 22f604fdec2cca9a1295acc19ca36a70 452 PIRSF PIRSF037714 1 452 1.2E-176 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AVL55_05475 22f604fdec2cca9a1295acc19ca36a70 452 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 435 6.2E-28 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 SUPERFAMILY SSF53067 153 339 2.57E-49 T 11-10-2018 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 Gene3D G3DSA:3.90.640.10 190 263 9.8E-129 T 11-10-2018 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 SUPERFAMILY SSF53067 9 152 7.37E-38 T 11-10-2018 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 6.2E-166 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 Gene3D G3DSA:3.30.420.40 158 321 9.8E-129 T 11-10-2018 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 4.1E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 4.1E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 4.1E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 4.1E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 4.1E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 Gene3D G3DSA:3.30.420.40 14 331 9.8E-129 T 11-10-2018 AVL55_01065 7d3296167bdce690d1bd6ca91c070ab7 347 Pfam PF06723 MreB/Mbl protein 11 337 2.2E-148 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AVL55_04605 6ea3255019c8be332d13e1cd51c91542 536 SUPERFAMILY SSF109604 272 524 4.39E-11 T 11-10-2018 AVL55_04605 6ea3255019c8be332d13e1cd51c91542 536 Gene3D G3DSA:1.10.3210.10 269 400 3.7E-6 T 11-10-2018 AVL55_14525 142e0798fa09b12e312db58020af484a 550 TIGRFAM TIGR01810 betA: choline dehydrogenase 5 532 1.1E-235 T 11-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AVL55_14525 142e0798fa09b12e312db58020af484a 550 SUPERFAMILY SSF54373 290 472 8.24E-62 T 11-10-2018 AVL55_14525 142e0798fa09b12e312db58020af484a 550 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AVL55_14525 142e0798fa09b12e312db58020af484a 550 Pfam PF05199 GMC oxidoreductase 386 522 2.0E-41 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AVL55_14525 142e0798fa09b12e312db58020af484a 550 SUPERFAMILY SSF51905 3 530 1.39E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_14525 142e0798fa09b12e312db58020af484a 550 Gene3D G3DSA:3.30.410.40 150 469 2.1E-181 T 11-10-2018 AVL55_14525 142e0798fa09b12e312db58020af484a 550 Gene3D G3DSA:4.10.450.10 37 196 2.1E-181 T 11-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AVL55_14525 142e0798fa09b12e312db58020af484a 550 Pfam PF00732 GMC oxidoreductase 4 295 6.9E-97 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AVL55_14525 142e0798fa09b12e312db58020af484a 550 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AVL55_14525 142e0798fa09b12e312db58020af484a 550 Gene3D G3DSA:3.50.50.60 4 526 2.1E-181 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_14525 142e0798fa09b12e312db58020af484a 550 Gene3D G3DSA:1.10.1220.110 96 149 2.1E-181 T 11-10-2018 AVL55_14525 142e0798fa09b12e312db58020af484a 550 PIRSF PIRSF000137 1 533 8.4E-157 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 SMART SM00957 6 402 0.0 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 SUPERFAMILY SSF81767 227 368 1.7E-42 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 SUPERFAMILY SSF52540 416 618 1.74E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 SUPERFAMILY SSF52540 5 415 4.25E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 SUPERFAMILY SSF81886 620 890 1.44E-85 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.2E-71 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 PRINTS PR00906 SecA protein signature 117 127 2.1E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 PRINTS PR00906 SecA protein signature 413 426 2.1E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 PRINTS PR00906 SecA protein signature 376 393 2.1E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 PRINTS PR00906 SecA protein signature 63 87 2.1E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 PRINTS PR00906 SecA protein signature 101 115 2.1E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 PRINTS PR00906 SecA protein signature 170 190 2.1E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 PRINTS PR00906 SecA protein signature 339 361 2.1E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 Pfam PF07517 SecA DEAD-like domain 7 402 3.4E-134 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 SMART SM00958 228 358 1.3E-81 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 Gene3D G3DSA:3.40.50.300 22 415 1.3E-176 T 11-10-2018 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 Gene3D G3DSA:3.40.50.300 417 620 1.1E-91 T 11-10-2018 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 Gene3D G3DSA:3.90.1440.10 229 368 1.3E-176 T 11-10-2018 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.066 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 Gene3D G3DSA:1.10.3060.10 621 833 1.4E-80 T 11-10-2018 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.8E-38 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AVL55_15195 d94c8107281d05d6d913eeace930b19e 902 Pfam PF02810 SEC-C motif 882 900 1.8E-10 T 11-10-2018 IPR004027 SEC-C motif AVL55_08125 9d2dd52275a552491a576395628e2fbd 171 Pfam PF10531 SLBB domain 99 142 2.3E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_08125 9d2dd52275a552491a576395628e2fbd 171 Gene3D G3DSA:3.10.560.10 17 168 1.8E-19 T 11-10-2018 AVL55_08125 9d2dd52275a552491a576395628e2fbd 171 Pfam PF02563 Polysaccharide biosynthesis/export protein 20 92 1.0E-17 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AVL55_08125 9d2dd52275a552491a576395628e2fbd 171 Gene3D G3DSA:3.30.1950.10 25 96 1.8E-19 T 11-10-2018 AVL55_11385 7453e79acafb96682f5f19a1c8071ae9 278 Gene3D G3DSA:3.40.50.300 6 208 4.0E-27 T 11-10-2018 AVL55_11385 7453e79acafb96682f5f19a1c8071ae9 278 SMART SM00382 25 183 1.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_11385 7453e79acafb96682f5f19a1c8071ae9 278 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 177 7.7E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_11385 7453e79acafb96682f5f19a1c8071ae9 278 SUPERFAMILY SSF52540 10 271 1.95E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_03890 a9eabc732824b7e92550bd2eb2dd8843 115 Gene3D G3DSA:3.40.190.10 74 110 7.5E-11 T 11-10-2018 AVL55_03890 a9eabc732824b7e92550bd2eb2dd8843 115 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 3 110 2.8E-10 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_03890 a9eabc732824b7e92550bd2eb2dd8843 115 Gene3D G3DSA:3.40.190.10 6 73 7.5E-11 T 11-10-2018 AVL55_03890 a9eabc732824b7e92550bd2eb2dd8843 115 SUPERFAMILY SSF53850 3 111 6.19E-12 T 11-10-2018 AVL55_02405 a32c56207461fd3478f169129196589b 109 Pfam PF08274 PhnA Zinc-Ribbon 2 30 1.2E-14 T 11-10-2018 IPR013987 PhnA protein, N-terminal AVL55_02405 a32c56207461fd3478f169129196589b 109 SUPERFAMILY SSF82057 36 109 2.24E-22 T 11-10-2018 AVL55_02405 a32c56207461fd3478f169129196589b 109 Pfam PF03831 PhnA domain 42 109 1.2E-24 T 11-10-2018 IPR013988 PhnA protein, C-terminal AVL55_02405 a32c56207461fd3478f169129196589b 109 Gene3D G3DSA:2.30.30.40 40 109 1.0E-24 T 11-10-2018 AVL55_02405 a32c56207461fd3478f169129196589b 109 Gene3D G3DSA:2.20.25.10 1 39 9.4E-19 T 11-10-2018 AVL55_02405 a32c56207461fd3478f169129196589b 109 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 109 6.3E-37 T 11-10-2018 IPR004624 PhnA protein AVL55_02405 a32c56207461fd3478f169129196589b 109 SUPERFAMILY SSF57783 1 37 4.93E-14 T 11-10-2018 AVL55_10900 7761c73ddbb3bc89723035bcad5ef32c 301 Gene3D G3DSA:3.40.190.10 91 289 8.8E-61 T 11-10-2018 AVL55_10900 7761c73ddbb3bc89723035bcad5ef32c 301 Gene3D G3DSA:3.40.190.10 163 264 8.8E-61 T 11-10-2018 AVL55_10900 7761c73ddbb3bc89723035bcad5ef32c 301 Gene3D G3DSA:1.10.10.10 3 89 1.7E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_10900 7761c73ddbb3bc89723035bcad5ef32c 301 SUPERFAMILY SSF46785 3 111 1.31E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_10900 7761c73ddbb3bc89723035bcad5ef32c 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.2E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_10900 7761c73ddbb3bc89723035bcad5ef32c 301 SUPERFAMILY SSF53850 89 297 8.22E-43 T 11-10-2018 AVL55_10900 7761c73ddbb3bc89723035bcad5ef32c 301 Pfam PF03466 LysR substrate binding domain 89 291 5.1E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_03355 5ff9f775ea2d420c12db384c821b8715 308 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 15 308 57.691 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AVL55_03355 5ff9f775ea2d420c12db384c821b8715 308 Pfam PF00589 Phage integrase family 125 294 3.2E-57 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_03355 5ff9f775ea2d420c12db384c821b8715 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 17 308 56.177 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AVL55_03355 5ff9f775ea2d420c12db384c821b8715 308 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 21 307 7.4E-116 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AVL55_03355 5ff9f775ea2d420c12db384c821b8715 308 Gene3D G3DSA:1.10.150.130 15 111 1.1E-20 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AVL55_03355 5ff9f775ea2d420c12db384c821b8715 308 SUPERFAMILY SSF56349 20 298 2.83E-59 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_03355 5ff9f775ea2d420c12db384c821b8715 308 Gene3D G3DSA:1.10.443.10 123 301 2.9E-72 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_03355 5ff9f775ea2d420c12db384c821b8715 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 101 8.2E-22 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 Gene3D G3DSA:3.30.70.1430 38 805 2.1E-231 T 11-10-2018 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 Gene3D G3DSA:1.20.1640.10 507 1014 2.1E-231 T 11-10-2018 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 SUPERFAMILY SSF82866 798 1019 1.57E-41 T 11-10-2018 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 2.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 2.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 2.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 2.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 Gene3D G3DSA:3.30.70.1320 131 323 2.1E-231 T 11-10-2018 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 SUPERFAMILY SSF82714 722 794 1.28E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 SUPERFAMILY SSF82714 176 258 6.28E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 SUPERFAMILY SSF82693 39 128 9.68E-16 T 11-10-2018 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 Gene3D G3DSA:1.20.1640.10 8 506 2.1E-231 T 11-10-2018 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 Pfam PF00873 AcrB/AcrD/AcrF family 2 1016 3.9E-142 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 Gene3D G3DSA:3.30.70.1430 564 662 2.1E-231 T 11-10-2018 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 SUPERFAMILY SSF82866 292 487 2.88E-31 T 11-10-2018 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 Gene3D G3DSA:3.30.2090.10 710 797 2.1E-231 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 Gene3D G3DSA:3.30.70.1440 663 858 2.1E-231 T 11-10-2018 AVL55_02675 41eb33198aa73ea951811046a07edddb 1047 Gene3D G3DSA:3.30.2090.10 172 263 2.1E-231 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 SMART SM00788 4 425 3.2E-298 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.004 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 Gene3D G3DSA:1.10.300.10 102 201 3.9E-103 T 11-10-2018 AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 4.2E-193 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 Gene3D G3DSA:3.90.170.10 267 432 3.2E-69 T 11-10-2018 AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 2.1E-178 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 SUPERFAMILY SSF52540 3 430 6.9E-179 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AVL55_02295 a6202d11a73343c943cf9e4b18702178 432 Gene3D G3DSA:3.40.440.10 6 249 3.9E-103 T 11-10-2018 AVL55_02960 89a2a92484eaa22c6a8ab4a306469828 123 Pfam PF13806 Rieske-like [2Fe-2S] domain 16 121 2.8E-34 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AVL55_02960 89a2a92484eaa22c6a8ab4a306469828 123 SUPERFAMILY SSF50022 16 123 6.19E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AVL55_02960 89a2a92484eaa22c6a8ab4a306469828 123 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 16 121 8.3E-31 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AVL55_02960 89a2a92484eaa22c6a8ab4a306469828 123 Gene3D G3DSA:2.102.10.10 10 123 2.2E-30 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AVL55_05145 7710c535e9627e807276539ad89f4619 771 Gene3D G3DSA:3.30.750.140 623 732 8.8E-32 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily AVL55_05145 7710c535e9627e807276539ad89f4619 771 PRINTS PR01007 Flagellar hook-length control protein signature 654 672 1.0E-7 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AVL55_05145 7710c535e9627e807276539ad89f4619 771 PRINTS PR01007 Flagellar hook-length control protein signature 391 408 1.0E-7 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AVL55_05145 7710c535e9627e807276539ad89f4619 771 PRINTS PR01007 Flagellar hook-length control protein signature 687 710 1.0E-7 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AVL55_05145 7710c535e9627e807276539ad89f4619 771 Pfam PF02120 Flagellar hook-length control protein FliK 639 721 6.1E-23 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AVL55_09845 3f68888a7acfabe6a752a8d3441b7c5f 331 Pfam PF00581 Rhodanese-like domain 115 210 2.7E-7 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_09845 3f68888a7acfabe6a752a8d3441b7c5f 331 Gene3D G3DSA:3.40.250.10 97 250 1.8E-51 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_09845 3f68888a7acfabe6a752a8d3441b7c5f 331 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.446 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 AVL55_09845 3f68888a7acfabe6a752a8d3441b7c5f 331 SMART SM00450 113 214 8.8E-20 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_09845 3f68888a7acfabe6a752a8d3441b7c5f 331 SUPERFAMILY SSF52821 94 241 2.88E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_09845 3f68888a7acfabe6a752a8d3441b7c5f 331 Gene3D G3DSA:3.30.70.100 1 96 7.0E-34 T 11-10-2018 AVL55_09675 9c5097eeee7082c4fe1a03f28707442d 565 Gene3D G3DSA:3.20.20.80 35 456 1.5E-88 T 11-10-2018 AVL55_09675 9c5097eeee7082c4fe1a03f28707442d 565 SUPERFAMILY SSF51445 44 463 2.57E-70 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_09675 9c5097eeee7082c4fe1a03f28707442d 565 SUPERFAMILY SSF51011 473 545 8.34E-6 T 11-10-2018 AVL55_09675 9c5097eeee7082c4fe1a03f28707442d 565 SMART SM00642 52 454 1.9E-33 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_09675 9c5097eeee7082c4fe1a03f28707442d 565 Pfam PF00128 Alpha amylase, catalytic domain 96 417 8.0E-46 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_09800 ef3f2587b92b5b3241ec89bda6e18e1a 227 SUPERFAMILY SSF141371 131 222 4.51E-10 T 11-10-2018 AVL55_09800 ef3f2587b92b5b3241ec89bda6e18e1a 227 SUPERFAMILY SSF141371 14 121 1.73E-23 T 11-10-2018 AVL55_09800 ef3f2587b92b5b3241ec89bda6e18e1a 227 Pfam PF12945 Flagellar protein YcgR 23 112 1.8E-10 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AVL55_09800 ef3f2587b92b5b3241ec89bda6e18e1a 227 Gene3D G3DSA:2.30.110.10 8 121 9.0E-16 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AVL55_09800 ef3f2587b92b5b3241ec89bda6e18e1a 227 Pfam PF07238 PilZ domain 125 213 4.0E-9 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AVL55_09800 ef3f2587b92b5b3241ec89bda6e18e1a 227 Gene3D G3DSA:2.40.10.220 129 224 8.4E-7 T 11-10-2018 AVL55_13390 fd4518f034b0a4f71e3215e4816b6d19 841 Pfam PF07238 PilZ domain 155 212 2.5E-5 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AVL55_00340 80ac21bd8a754bd84cac8bc07f88d41e 189 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 13 175 24.705 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AVL55_00340 80ac21bd8a754bd84cac8bc07f88d41e 189 Gene3D G3DSA:3.40.1410.10 7 175 8.7E-44 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AVL55_00340 80ac21bd8a754bd84cac8bc07f88d41e 189 Pfam PF04345 Chorismate lyase 13 177 3.1E-33 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AVL55_00340 80ac21bd8a754bd84cac8bc07f88d41e 189 SUPERFAMILY SSF64288 21 175 7.85E-41 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AVL55_19290 b8c2bab54069f7740ddaabbea198b5ea 381 Pfam PF11017 Protein of unknown function (DUF2855) 43 370 1.4E-97 T 11-10-2018 IPR021276 Protein of unknown function DUF2855 AVL55_12555 cbaf4785f36859a4309708400a4b3d54 206 Gene3D G3DSA:3.30.70.1070 121 198 1.6E-7 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AVL55_12555 cbaf4785f36859a4309708400a4b3d54 206 Pfam PF05036 Sporulation related domain 128 192 2.8E-11 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AVL55_12555 cbaf4785f36859a4309708400a4b3d54 206 SUPERFAMILY SSF110997 126 198 1.44E-13 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AVL55_11980 882e9cdb1456a39e94aba9916fd4a74c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.4E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_11980 882e9cdb1456a39e94aba9916fd4a74c 307 Pfam PF03466 LysR substrate binding domain 91 289 5.4E-29 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_11980 882e9cdb1456a39e94aba9916fd4a74c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_11980 882e9cdb1456a39e94aba9916fd4a74c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_11980 882e9cdb1456a39e94aba9916fd4a74c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_11980 882e9cdb1456a39e94aba9916fd4a74c 307 SUPERFAMILY SSF53850 92 291 1.32E-31 T 11-10-2018 AVL55_11980 882e9cdb1456a39e94aba9916fd4a74c 307 Gene3D G3DSA:3.40.190.290 95 292 1.5E-25 T 11-10-2018 AVL55_11980 882e9cdb1456a39e94aba9916fd4a74c 307 SUPERFAMILY SSF46785 5 90 3.54E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_11980 882e9cdb1456a39e94aba9916fd4a74c 307 Gene3D G3DSA:1.10.10.10 2 85 5.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_04535 2f7b775f6f4385091ae2a6b7c1a0417e 340 SUPERFAMILY SSF51735 1 336 5.03E-99 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_04535 2f7b775f6f4385091ae2a6b7c1a0417e 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 326 9.0E-62 T 11-10-2018 IPR016040 NAD(P)-binding domain AVL55_04535 2f7b775f6f4385091ae2a6b7c1a0417e 340 Gene3D G3DSA:3.40.50.720 4 275 1.0E-145 T 11-10-2018 AVL55_04535 2f7b775f6f4385091ae2a6b7c1a0417e 340 Gene3D G3DSA:3.90.25.10 195 330 1.0E-145 T 11-10-2018 AVL55_04535 2f7b775f6f4385091ae2a6b7c1a0417e 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 336 2.0E-141 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AVL55_09865 ba97d53b327600cf7dfd8b469ff25321 335 SUPERFAMILY SSF50129 7 157 1.22E-37 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_09865 ba97d53b327600cf7dfd8b469ff25321 335 Gene3D G3DSA:3.40.50.720 133 301 7.4E-100 T 11-10-2018 AVL55_09865 ba97d53b327600cf7dfd8b469ff25321 335 Pfam PF00107 Zinc-binding dehydrogenase 164 257 2.4E-19 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_09865 ba97d53b327600cf7dfd8b469ff25321 335 SMART SM00829 19 331 6.3E-42 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_09865 ba97d53b327600cf7dfd8b469ff25321 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 94 2.5E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AVL55_09865 ba97d53b327600cf7dfd8b469ff25321 335 SUPERFAMILY SSF51735 125 302 1.66E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09865 ba97d53b327600cf7dfd8b469ff25321 335 Gene3D G3DSA:3.90.180.10 29 319 7.4E-100 T 11-10-2018 AVL55_09865 ba97d53b327600cf7dfd8b469ff25321 335 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 153 174 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 SUPERFAMILY SSF63380 246 314 7.25E-8 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 367 1.3E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 333 352 1.3E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 424 432 1.3E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 269 276 1.3E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 Pfam PF00258 Flavodoxin 43 168 5.2E-26 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 Gene3D G3DSA:3.40.50.360 17 176 9.8E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 SUPERFAMILY SSF52218 39 169 1.01E-33 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 PRINTS PR00369 Flavodoxin signature 124 134 6.9E-12 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 PRINTS PR00369 Flavodoxin signature 148 167 6.9E-12 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 PRINTS PR00369 Flavodoxin signature 42 55 6.9E-12 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 PRINTS PR00369 Flavodoxin signature 89 100 6.9E-12 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 Pfam PF00175 Oxidoreductase NAD-binding domain 334 438 1.3E-7 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 Gene3D G3DSA:3.40.50.80 324 465 3.1E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 11-10-2018 IPR010916 TonB box, conserved site AVL55_18060 12a005c6332e610ce80bb4ebdb8d9c97 465 SUPERFAMILY SSF52343 327 465 2.23E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_01985 d54904797cdd119848aaea1358409966 436 Gene3D G3DSA:3.40.630.30 288 436 1.2E-37 T 11-10-2018 AVL55_01985 d54904797cdd119848aaea1358409966 436 Gene3D G3DSA:3.40.1160.10 9 287 2.7E-88 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_01985 d54904797cdd119848aaea1358409966 436 SUPERFAMILY SSF55729 291 413 1.32E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_01985 d54904797cdd119848aaea1358409966 436 Pfam PF00696 Amino acid kinase family 25 233 5.5E-31 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AVL55_01985 d54904797cdd119848aaea1358409966 436 SUPERFAMILY SSF53633 5 288 2.09E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_01985 d54904797cdd119848aaea1358409966 436 Pfam PF00583 Acetyltransferase (GNAT) family 320 396 9.0E-9 T 11-10-2018 IPR000182 GNAT domain AVL55_01985 d54904797cdd119848aaea1358409966 436 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 436 199.435 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AVL55_01985 d54904797cdd119848aaea1358409966 436 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 434 3.9E-175 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AVL55_01985 d54904797cdd119848aaea1358409966 436 PIRSF PIRSF000423 1 436 1.0E-179 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 SUPERFAMILY SSF54719 84 192 3.27E-41 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 SUPERFAMILY SSF46609 1 84 3.14E-36 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.2E-34 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 PIRSF PIRSF000349 1 193 7.8E-84 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 Gene3D G3DSA:1.10.287.990 20 82 9.9E-27 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 3.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.0E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 4.4E-37 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_06330 337a09ca38367996ed5e0662695f2f92 193 Gene3D G3DSA:2.40.500.20 83 193 1.8E-41 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Pfam PF05188 MutS domain II 119 244 4.1E-29 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Gene3D G3DSA:3.40.50.300 558 838 6.8E-98 T 11-10-2018 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Gene3D G3DSA:1.10.1420.10 257 548 5.2E-107 T 11-10-2018 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 868 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 SMART SM00533 274 580 1.4E-97 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 863 24.693 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Pfam PF05192 MutS domain III 260 548 4.8E-42 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Pfam PF01624 MutS domain I 1 110 1.8E-40 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Gene3D G3DSA:1.10.1420.10 376 492 5.2E-107 T 11-10-2018 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Gene3D G3DSA:3.30.420.110 118 253 4.7E-39 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 677 693 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 SUPERFAMILY SSF48334 258 554 1.15E-90 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 SUPERFAMILY SSF52540 556 787 2.22E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 SMART SM00534 596 783 1.1E-115 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 SUPERFAMILY SSF55271 1 106 1.29E-39 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Pfam PF05190 MutS family domain IV 417 505 6.4E-31 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Gene3D G3DSA:3.40.1170.10 1 112 1.5E-48 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 PIRSF PIRSF037677 1 822 8.7E-150 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 Pfam PF00488 MutS domain V 599 786 1.4E-85 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AVL55_04440 befb6bef9ff8a254f1ce9feff696bd1e 873 SUPERFAMILY SSF53150 105 257 9.29E-44 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AVL55_09170 888769c126bedd801fd300aaa73a96d1 183 SUPERFAMILY SSF55469 1 181 6.94E-36 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AVL55_09170 888769c126bedd801fd300aaa73a96d1 183 PIRSF PIRSF000232 1 183 9.3E-58 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AVL55_09170 888769c126bedd801fd300aaa73a96d1 183 Pfam PF00881 Nitroreductase family 9 161 5.4E-21 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AVL55_09170 888769c126bedd801fd300aaa73a96d1 183 Gene3D G3DSA:3.40.109.10 1 182 1.0E-38 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AVL55_04230 29a0e2c83636b5410fd0468660967247 910 SUPERFAMILY SSF52540 269 490 1.55E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04230 29a0e2c83636b5410fd0468660967247 910 Pfam PF00005 ABC transporter 21 167 4.9E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_04230 29a0e2c83636b5410fd0468660967247 910 Pfam PF12698 ABC-2 family transporter protein 566 902 1.3E-38 T 11-10-2018 AVL55_04230 29a0e2c83636b5410fd0468660967247 910 SUPERFAMILY SSF52540 4 231 3.55E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04230 29a0e2c83636b5410fd0468660967247 910 Gene3D G3DSA:3.40.50.300 1 243 6.3E-59 T 11-10-2018 AVL55_04230 29a0e2c83636b5410fd0468660967247 910 SMART SM00382 294 485 2.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_04230 29a0e2c83636b5410fd0468660967247 910 SMART SM00382 29 217 3.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_04230 29a0e2c83636b5410fd0468660967247 910 Gene3D G3DSA:3.40.50.300 257 509 1.5E-63 T 11-10-2018 AVL55_04230 29a0e2c83636b5410fd0468660967247 910 Pfam PF00005 ABC transporter 285 429 2.0E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_04230 29a0e2c83636b5410fd0468660967247 910 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_13715 ddab95e79a5a5e935e9b5d7410b54e6d 300 Pfam PF00850 Histone deacetylase domain 40 283 1.2E-49 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_13715 ddab95e79a5a5e935e9b5d7410b54e6d 300 SUPERFAMILY SSF52768 1 287 2.64E-81 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AVL55_13715 ddab95e79a5a5e935e9b5d7410b54e6d 300 Gene3D G3DSA:3.40.800.20 2 295 1.2E-61 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_13715 ddab95e79a5a5e935e9b5d7410b54e6d 300 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 1.4E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_13715 ddab95e79a5a5e935e9b5d7410b54e6d 300 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 1.4E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_13715 ddab95e79a5a5e935e9b5d7410b54e6d 300 PRINTS PR01270 Histone deacetylase superfamily signature 225 235 1.4E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_18985 30d0041b90b8f4749c6947f4de7238e8 182 SUPERFAMILY SSF46767 94 175 1.57E-30 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AVL55_18985 30d0041b90b8f4749c6947f4de7238e8 182 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 95 174 2.8E-36 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AVL55_18985 30d0041b90b8f4749c6947f4de7238e8 182 Gene3D G3DSA:1.10.10.10 94 178 6.5E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_18985 30d0041b90b8f4749c6947f4de7238e8 182 Gene3D G3DSA:3.30.160.70 1 90 1.7E-10 T 11-10-2018 AVL55_18985 30d0041b90b8f4749c6947f4de7238e8 182 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 145 151 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AVL55_18985 30d0041b90b8f4749c6947f4de7238e8 182 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 96 175 1.0E-31 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AVL55_18985 30d0041b90b8f4749c6947f4de7238e8 182 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 175 38.804 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AVL55_18985 30d0041b90b8f4749c6947f4de7238e8 182 SUPERFAMILY SSF53155 6 99 7.26E-10 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 SUPERFAMILY SSF51735 1 122 1.65E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 SMART SM00881 4 100 3.5E-36 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 8.4E-41 T 11-10-2018 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 8.4E-41 T 11-10-2018 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 8.4E-41 T 11-10-2018 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 8.4E-41 T 11-10-2018 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 286 7.2E-147 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 Pfam PF02629 CoA binding domain 6 99 5.9E-32 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 SUPERFAMILY SSF52210 123 285 1.06E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.333 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 Gene3D G3DSA:3.40.50.261 124 288 4.7E-76 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 Pfam PF00549 CoA-ligase 151 270 2.5E-20 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 Gene3D G3DSA:3.40.50.720 1 123 4.4E-52 T 11-10-2018 AVL55_09615 ab764bb3e555253b8cf3c9c9e4df4688 290 PIRSF PIRSF001553 1 289 1.1E-134 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AVL55_07590 318ebc66d1e7d4a9aeb967703c5171a7 333 SUPERFAMILY SSF50891 84 281 9.5E-34 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_07590 318ebc66d1e7d4a9aeb967703c5171a7 333 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 85 273 1.5E-33 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AVL55_07590 318ebc66d1e7d4a9aeb967703c5171a7 333 Gene3D G3DSA:2.40.100.10 37 280 5.2E-38 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 SUPERFAMILY SSF47413 2 59 1.08E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.6E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 Gene3D G3DSA:3.40.50.2300 159 289 4.4E-74 T 11-10-2018 AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.3E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.3E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 Pfam PF13377 Periplasmic binding protein-like domain 168 328 3.7E-32 T 11-10-2018 AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 Gene3D G3DSA:1.10.260.40 1 58 1.0E-22 T 11-10-2018 AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 SMART SM00354 1 71 1.7E-30 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 SUPERFAMILY SSF53822 61 329 9.03E-80 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_19940 4328243ee0989c34059b42031ce9ffc6 333 Gene3D G3DSA:3.40.50.2300 62 302 4.4E-74 T 11-10-2018 AVL55_14565 ac6cd399fe7d4a8bd3a2ea624f1fa570 560 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 186 280 3.1E-14 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AVL55_14565 ac6cd399fe7d4a8bd3a2ea624f1fa570 560 Gene3D G3DSA:1.20.140.10 291 447 8.1E-37 T 11-10-2018 AVL55_14565 ac6cd399fe7d4a8bd3a2ea624f1fa570 560 SUPERFAMILY SSF47203 295 448 4.67E-40 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_14565 ac6cd399fe7d4a8bd3a2ea624f1fa570 560 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 445 1.2E-28 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_14565 ac6cd399fe7d4a8bd3a2ea624f1fa570 560 Gene3D G3DSA:2.40.110.20 136 290 6.2E-53 T 11-10-2018 AVL55_14565 ac6cd399fe7d4a8bd3a2ea624f1fa570 560 SUPERFAMILY SSF56645 72 299 5.36E-32 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 1.1E-107 T 11-10-2018 AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 SUPERFAMILY SSF82697 1 152 2.3E-47 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 SUPERFAMILY SSF52317 1037 1294 6.87E-95 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1293 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Gene3D G3DSA:3.40.50.880 982 1295 3.4E-137 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 838 960 1.6E-12 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 588 1.7E-28 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Gene3D G3DSA:3.90.650.10 422 606 1.9E-55 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Gene3D G3DSA:3.90.650.10 812 981 1.3E-26 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 SUPERFAMILY SSF56042 431 615 4.64E-54 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Gene3D G3DSA:3.30.1330.10 614 811 1.1E-22 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Gene3D G3DSA:3.30.1330.10 214 421 9.1E-41 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 SUPERFAMILY SSF55326 621 816 7.59E-66 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 SUPERFAMILY SSF56042 826 1035 4.93E-51 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 SUPERFAMILY SSF55326 221 428 8.02E-64 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 SMART SM01211 1041 1294 4.6E-152 T 11-10-2018 AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Gene3D G3DSA:1.10.8.750 153 213 1.4E-26 T 11-10-2018 AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 SUPERFAMILY SSF109736 156 220 5.75E-22 T 11-10-2018 AVL55_04800 08c2218b2ae31713ae7c0171e17433fe 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1295 21.33 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 SMART SM00400 36 90 1.3E-38 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 SUPERFAMILY SSF57783 5 101 2.89E-37 T 11-10-2018 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Gene3D G3DSA:1.10.860.10 444 592 2.2E-31 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 SUPERFAMILY SSF117023 456 589 1.15E-31 T 11-10-2018 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Hamap MF_00974 DNA primase [dnaG]. 4 587 28.837 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Pfam PF08278 DNA primase DnaG DnaB-binding 461 585 7.9E-27 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 254 1.5E-43 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Gene3D G3DSA:1.20.50.20 371 428 4.6E-9 T 11-10-2018 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 PIRSF PIRSF002811 2 592 3.4E-148 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Pfam PF01807 CHC2 zinc finger 6 101 3.3E-41 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 SMART SM00766 459 586 1.2E-26 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 3.8E-149 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Gene3D G3DSA:3.40.1360.10 244 370 5.0E-40 T 11-10-2018 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 SMART SM00493 262 333 3.2E-20 T 11-10-2018 IPR006171 TOPRIM domain AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Gene3D G3DSA:3.90.580.10 1 101 1.2E-38 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Pfam PF10410 DnaB-helicase binding domain of primase 372 423 2.9E-6 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Pfam PF13662 Toprim domain 262 340 1.5E-13 T 11-10-2018 IPR006171 TOPRIM domain AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 Gene3D G3DSA:3.90.980.10 118 243 7.3E-47 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AVL55_03110 2f686d5ec0e838bf983b812523a10de9 592 SUPERFAMILY SSF56731 119 428 5.49E-108 T 11-10-2018 AVL55_07750 1e995bbfadd713f7162baab5c5fa8309 343 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 54 336 7.5E-61 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AVL55_07750 1e995bbfadd713f7162baab5c5fa8309 343 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 343 143.043 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AVL55_07750 1e995bbfadd713f7162baab5c5fa8309 343 Gene3D G3DSA:2.40.50.630 269 331 1.2E-112 T 11-10-2018 AVL55_07750 1e995bbfadd713f7162baab5c5fa8309 343 SUPERFAMILY SSF53187 42 336 1.23E-76 T 11-10-2018 AVL55_07750 1e995bbfadd713f7162baab5c5fa8309 343 PIRSF PIRSF017020 4 342 1.2E-133 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AVL55_07750 1e995bbfadd713f7162baab5c5fa8309 343 Gene3D G3DSA:3.40.630.10 30 268 1.2E-112 T 11-10-2018 AVL55_07750 1e995bbfadd713f7162baab5c5fa8309 343 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 35 333 7.1E-105 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AVL55_19120 a59e10ea14d36869db1596db1e8088a8 313 SUPERFAMILY SSF81464 15 113 1.23E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19120 a59e10ea14d36869db1596db1e8088a8 313 Gene3D G3DSA:2.60.40.420 109 277 1.7E-58 T 11-10-2018 IPR008972 Cupredoxin AVL55_19120 a59e10ea14d36869db1596db1e8088a8 313 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 144 214 8.9E-6 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19120 a59e10ea14d36869db1596db1e8088a8 313 Gene3D G3DSA:1.10.287.90 24 108 1.0E-31 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19120 a59e10ea14d36869db1596db1e8088a8 313 Pfam PF06481 COX Aromatic Rich Motif 235 280 1.5E-21 T 11-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AVL55_19120 a59e10ea14d36869db1596db1e8088a8 313 PIRSF PIRSF000292 2 309 6.1E-129 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AVL55_19120 a59e10ea14d36869db1596db1e8088a8 313 SUPERFAMILY SSF49503 117 277 4.41E-50 T 11-10-2018 IPR008972 Cupredoxin AVL55_19120 a59e10ea14d36869db1596db1e8088a8 313 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 14 235 3.8E-107 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AVL55_15840 3521f403745d6c42192ffab10621bb34 117 PIRSF PIRSF007028 1 117 1.7E-46 T 11-10-2018 IPR009874 Protein of unknown function DUF1428 AVL55_15840 3521f403745d6c42192ffab10621bb34 117 SUPERFAMILY SSF54909 1 116 1.66E-50 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_15840 3521f403745d6c42192ffab10621bb34 117 Gene3D G3DSA:3.30.70.100 1 117 3.0E-44 T 11-10-2018 AVL55_15840 3521f403745d6c42192ffab10621bb34 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 7.4E-43 T 11-10-2018 IPR009874 Protein of unknown function DUF1428 AVL55_15170 86d78cddfeee1974d89362b9d40c11e2 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 8 190 5.0E-62 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AVL55_15170 86d78cddfeee1974d89362b9d40c11e2 203 SUPERFAMILY SSF52540 6 198 1.17E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15170 86d78cddfeee1974d89362b9d40c11e2 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 6 200 27.578 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AVL55_15170 86d78cddfeee1974d89362b9d40c11e2 203 Pfam PF01121 Dephospho-CoA kinase 8 183 1.1E-69 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AVL55_15170 86d78cddfeee1974d89362b9d40c11e2 203 Gene3D G3DSA:3.40.50.300 4 202 1.2E-69 T 11-10-2018 AVL55_12375 6bcc5b325dfadc674839c6bf1d94539a 115 Pfam PF11225 Protein of unknown function (DUF3024) 60 114 1.2E-19 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 AVL55_13345 a7701beb9f25ec365a4a88fd0e04830f 366 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 4.7E-87 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13345 a7701beb9f25ec365a4a88fd0e04830f 366 SUPERFAMILY SSF55821 2 201 7.1E-89 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AVL55_13345 a7701beb9f25ec365a4a88fd0e04830f 366 SUPERFAMILY SSF142695 205 365 6.02E-44 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AVL55_13345 a7701beb9f25ec365a4a88fd0e04830f 366 Gene3D G3DSA:3.90.870.10 1 206 8.1E-91 T 11-10-2018 AVL55_13345 a7701beb9f25ec365a4a88fd0e04830f 366 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 6.4E-79 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13345 a7701beb9f25ec365a4a88fd0e04830f 366 Pfam PF00925 GTP cyclohydrolase II 208 364 2.6E-34 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AVL55_13345 a7701beb9f25ec365a4a88fd0e04830f 366 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 39.522 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13345 a7701beb9f25ec365a4a88fd0e04830f 366 PIRSF PIRSF001259 1 365 5.7E-128 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 Gene3D G3DSA:3.30.2090.10 704 794 1.5E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 Gene3D G3DSA:3.30.2090.10 177 267 1.5E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 Gene3D G3DSA:3.30.70.1430 38 802 1.5E-237 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 SUPERFAMILY SSF82714 714 787 1.44E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 Gene3D G3DSA:3.30.70.1430 554 652 1.5E-237 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 SUPERFAMILY SSF82866 791 1011 3.79E-41 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 SUPERFAMILY SSF82693 38 133 1.31E-20 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 Gene3D G3DSA:3.30.70.1440 653 854 1.5E-237 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 8.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 8.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 8.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 8.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 Gene3D G3DSA:3.30.70.1320 134 325 1.5E-237 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 Gene3D G3DSA:1.20.1640.10 503 1005 1.5E-237 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 SUPERFAMILY SSF82693 134 322 5.41E-17 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 SUPERFAMILY SSF82866 291 488 1.44E-35 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 Gene3D G3DSA:1.20.1640.10 8 502 1.5E-237 T 11-10-2018 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 Pfam PF00873 AcrB/AcrD/AcrF family 1 1010 8.5E-156 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_07870 d29aed5a382bc943e49a0fa54363bbdd 1015 SUPERFAMILY SSF82714 182 262 3.27E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 44.53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 SUPERFAMILY SSF52096 19 203 3.53E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 Gene3D G3DSA:3.90.226.10 6 207 1.2E-84 T 11-10-2018 AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 11-10-2018 IPR033135 ClpP, histidine active site AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 Pfam PF00574 Clp protease 22 201 1.0E-89 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 4.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 4.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 4.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 4.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 4.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 200 2.5E-107 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AVL55_13645 4581907afc8186b82609ff2c1f2f0081 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 11-10-2018 IPR018215 ClpP, Ser active site AVL55_06390 920353ae73f90bf476e60976ad9cc433 70 PIRSF PIRSF002599 1 70 2.9E-26 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AVL55_06390 920353ae73f90bf476e60976ad9cc433 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 11-10-2018 IPR019844 Cold-shock conserved site AVL55_06390 920353ae73f90bf476e60976ad9cc433 70 PRINTS PR00050 Cold shock protein signature 43 61 3.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_06390 920353ae73f90bf476e60976ad9cc433 70 PRINTS PR00050 Cold shock protein signature 28 37 3.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_06390 920353ae73f90bf476e60976ad9cc433 70 PRINTS PR00050 Cold shock protein signature 7 22 3.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_06390 920353ae73f90bf476e60976ad9cc433 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 7.7E-32 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AVL55_06390 920353ae73f90bf476e60976ad9cc433 70 SUPERFAMILY SSF50249 4 69 2.4E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_06390 920353ae73f90bf476e60976ad9cc433 70 Gene3D G3DSA:2.40.50.140 2 68 3.9E-31 T 11-10-2018 AVL55_06390 920353ae73f90bf476e60976ad9cc433 70 SMART SM00357 6 70 1.4E-30 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AVL55_10375 ceda92f10f081ee3097cfac1d81f8d8e 161 SUPERFAMILY SSF141868 5 145 5.1E-32 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_10375 ceda92f10f081ee3097cfac1d81f8d8e 161 Gene3D G3DSA:3.20.20.450 1 147 4.6E-32 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_10375 ceda92f10f081ee3097cfac1d81f8d8e 161 SMART SM00052 3 139 4.2E-4 T 11-10-2018 IPR001633 EAL domain AVL55_10375 ceda92f10f081ee3097cfac1d81f8d8e 161 Pfam PF00563 EAL domain 2 134 2.1E-28 T 11-10-2018 IPR001633 EAL domain AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 Gene3D G3DSA:3.40.50.300 190 379 2.4E-73 T 11-10-2018 AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 Gene3D G3DSA:1.10.8.630 2 112 2.1E-32 T 11-10-2018 AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 Pfam PF00271 Helicase conserved C-terminal domain 518 588 1.3E-5 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 SMART SM00490 492 589 1.7E-6 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 Pfam PF00270 DEAD/DEAH box helicase 221 364 2.5E-12 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 SUPERFAMILY SSF52540 178 377 7.04E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 TIGRFAM TIGR00595 priA: primosomal protein N' 221 725 1.8E-177 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 728 23.635 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 SMART SM00487 195 391 5.7E-16 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_17850 7a4de593e9a2548dd5ac7b96cfe88a08 729 SUPERFAMILY SSF52540 389 613 3.89E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 SUPERFAMILY SSF50993 43 449 3.92E-88 T 11-10-2018 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 Gene3D G3DSA:3.40.50.1820 64 717 1.1E-244 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 Pfam PF00326 Prolyl oligopeptidase family 508 721 8.4E-66 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 Gene3D G3DSA:2.130.10.120 115 448 1.1E-244 T 11-10-2018 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 46 446 1.1E-98 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 633 648 5.2E-46 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 517 541 5.2E-46 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 651 673 5.2E-46 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 491 509 5.2E-46 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 575 595 5.2E-46 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 545 564 5.2E-46 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_12850 24cb078c43caf773da6b3c5d7c0fb800 725 SUPERFAMILY SSF53474 460 700 1.75E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 PIRSF PIRSF000854 1 790 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 SUPERFAMILY SSF56059 2 384 1.29E-106 T 11-10-2018 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 783 1.6E-60 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 787 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 SUPERFAMILY SSF51621 463 787 3.14E-98 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 346 1.4E-117 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 455 5.5E-27 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 SUPERFAMILY SSF52009 349 466 8.63E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 Gene3D G3DSA:3.50.30.10 358 477 1.4E-40 T 11-10-2018 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 Gene3D G3DSA:3.30.470.20 194 357 1.3E-58 T 11-10-2018 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 Gene3D G3DSA:3.20.20.60 478 789 7.0E-104 T 11-10-2018 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 694 712 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AVL55_09045 1e816b4b80214e06eb6863fffb1c5a14 790 Gene3D G3DSA:3.30.1490.20 1 193 2.1E-71 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_03380 4fe9bc77bb12dec34a65b2a4bc1db55e 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 4.0E-97 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AVL55_03380 4fe9bc77bb12dec34a65b2a4bc1db55e 245 SUPERFAMILY SSF63892 4 241 6.02E-100 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AVL55_03380 4fe9bc77bb12dec34a65b2a4bc1db55e 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 130.608 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AVL55_03380 4fe9bc77bb12dec34a65b2a4bc1db55e 245 Gene3D G3DSA:3.20.20.70 1 244 8.2E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_03380 4fe9bc77bb12dec34a65b2a4bc1db55e 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.1E-103 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AVL55_07715 3250756c53c11210a51b9005bc3f1f6e 688 Gene3D G3DSA:3.10.620.30 352 512 1.1E-20 T 11-10-2018 AVL55_07715 3250756c53c11210a51b9005bc3f1f6e 688 SUPERFAMILY SSF54001 300 614 2.33E-48 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AVL55_07715 3250756c53c11210a51b9005bc3f1f6e 688 Pfam PF11992 Domain of unknown function (DUF3488) 28 354 4.8E-71 T 11-10-2018 IPR021878 Protein of unknown function DUF3488 AVL55_07715 3250756c53c11210a51b9005bc3f1f6e 688 SMART SM00460 430 499 5.8E-18 T 11-10-2018 IPR002931 Transglutaminase-like AVL55_07715 3250756c53c11210a51b9005bc3f1f6e 688 Pfam PF01841 Transglutaminase-like superfamily 384 497 9.2E-20 T 11-10-2018 IPR002931 Transglutaminase-like AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 SUPERFAMILY SSF51569 2 289 2.93E-92 T 11-10-2018 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 Gene3D G3DSA:3.20.20.70 1 292 1.6E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 288 7.1E-106 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.5E-32 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.5E-32 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.5E-32 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.5E-32 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 1.7E-94 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 SMART SM01130 1 290 9.9E-125 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 61.26 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AVL55_11240 95f94ef75258a5683354edb9cecb62c1 294 PIRSF PIRSF001365 1 294 4.9E-82 T 11-10-2018 IPR002220 DapA-like GO:0016829 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 6.3E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 6.3E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 6.3E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 6.3E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 6.3E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 6.3E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 6.3E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 SUPERFAMILY SSF82714 195 272 4.05E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 Gene3D G3DSA:1.20.1640.10 24 509 9.1E-254 T 11-10-2018 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 Pfam PF00873 AcrB/AcrD/AcrF family 18 1003 3.4E-184 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 SUPERFAMILY SSF82714 695 779 4.84E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 SUPERFAMILY SSF82693 54 148 4.45E-20 T 11-10-2018 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 Gene3D G3DSA:3.30.70.1320 148 335 9.1E-254 T 11-10-2018 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 Gene3D G3DSA:3.30.70.1430 558 643 9.1E-254 T 11-10-2018 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 Gene3D G3DSA:3.30.2090.10 693 782 9.1E-254 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 Gene3D G3DSA:3.30.2090.10 191 277 9.1E-254 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 SUPERFAMILY SSF82866 779 1009 1.12E-50 T 11-10-2018 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 Gene3D G3DSA:3.30.70.1430 54 790 9.1E-254 T 11-10-2018 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 Gene3D G3DSA:3.30.70.1440 644 840 9.1E-254 T 11-10-2018 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 SUPERFAMILY SSF82693 148 317 4.03E-12 T 11-10-2018 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 Gene3D G3DSA:1.20.1640.10 510 1000 9.1E-254 T 11-10-2018 AVL55_11580 6aa3e38e47bcd5c1f91fdfa5c0704bf7 1029 SUPERFAMILY SSF82866 298 496 3.92E-35 T 11-10-2018 AVL55_06955 fb9b5b2a373fab1cc20e8da68ca1a4d3 691 Gene3D G3DSA:2.40.170.20 157 691 1.3E-99 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_06955 fb9b5b2a373fab1cc20e8da68ca1a4d3 691 SUPERFAMILY SSF56935 19 687 8.75E-113 T 11-10-2018 AVL55_06955 fb9b5b2a373fab1cc20e8da68ca1a4d3 691 Gene3D G3DSA:2.170.130.10 33 156 3.0E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_06955 fb9b5b2a373fab1cc20e8da68ca1a4d3 691 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 686 8.9E-83 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AVL55_06955 fb9b5b2a373fab1cc20e8da68ca1a4d3 691 Pfam PF00593 TonB dependent receptor 214 686 1.1E-49 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_06955 fb9b5b2a373fab1cc20e8da68ca1a4d3 691 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 146 7.5E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_06385 94d3d113634918ece512477cde7f50e5 131 SUPERFAMILY SSF54593 1 127 7.92E-34 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_06385 94d3d113634918ece512477cde7f50e5 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 129 2.2E-62 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AVL55_06385 94d3d113634918ece512477cde7f50e5 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.7E-21 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AVL55_06385 94d3d113634918ece512477cde7f50e5 131 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AVL55_06385 94d3d113634918ece512477cde7f50e5 131 Gene3D G3DSA:3.10.180.10 1 130 6.3E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_06385 94d3d113634918ece512477cde7f50e5 131 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 401 676 4.8E-26 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 520 544 1.2E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 401 423 1.2E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 Gene3D G3DSA:3.20.20.70 27 394 1.3E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 31 352 3.4E-76 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 SUPERFAMILY SSF51971 358 544 1.53E-41 T 11-10-2018 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 Gene3D G3DSA:3.50.50.60 496 649 3.2E-119 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15435 851309c7b79a68913ac43393512f52c1 696 SUPERFAMILY SSF51395 24 387 4.89E-108 T 11-10-2018 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 SUPERFAMILY SSF51905 487 674 6.02E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15435 851309c7b79a68913ac43393512f52c1 696 Gene3D G3DSA:3.40.50.720 400 689 3.2E-119 T 11-10-2018 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 524 542 1.1E-15 T 11-10-2018 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 642 658 1.1E-15 T 11-10-2018 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 402 421 1.1E-15 T 11-10-2018 AVL55_15435 851309c7b79a68913ac43393512f52c1 696 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 484 502 1.1E-15 T 11-10-2018 AVL55_04615 ed8897b6f452dd574ee174b26b371959 458 Pfam PF11892 Domain of unknown function (DUF3412) 332 450 1.9E-56 T 11-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AVL55_04615 ed8897b6f452dd574ee174b26b371959 458 Pfam PF03641 Possible lysine decarboxylase 188 327 8.4E-33 T 11-10-2018 IPR031100 LOG family AVL55_04615 ed8897b6f452dd574ee174b26b371959 458 Pfam PF14793 Domain of unknown function (DUF4478) 5 111 5.0E-43 T 11-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AVL55_04615 ed8897b6f452dd574ee174b26b371959 458 Gene3D G3DSA:3.40.50.450 120 450 4.1E-118 T 11-10-2018 AVL55_04615 ed8897b6f452dd574ee174b26b371959 458 Gene3D G3DSA:3.30.1850.10 1 114 1.1E-42 T 11-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AVL55_04615 ed8897b6f452dd574ee174b26b371959 458 SUPERFAMILY SSF102405 126 327 5.19E-41 T 11-10-2018 AVL55_16650 e4f308015f35bc5fc6d5b61a11d3dcf3 343 Gene3D G3DSA:1.10.10.10 278 327 1.5E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16650 e4f308015f35bc5fc6d5b61a11d3dcf3 343 SMART SM00849 34 249 5.9E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_16650 e4f308015f35bc5fc6d5b61a11d3dcf3 343 Pfam PF00753 Metallo-beta-lactamase superfamily 33 249 6.0E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_16650 e4f308015f35bc5fc6d5b61a11d3dcf3 343 SUPERFAMILY SSF56281 8 334 1.97E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_16650 e4f308015f35bc5fc6d5b61a11d3dcf3 343 Gene3D G3DSA:3.60.15.10 14 276 1.1E-60 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 Gene3D G3DSA:3.40.50.450 4 294 1.6E-91 T 11-10-2018 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 1.0E-64 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.0E-64 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 1.0E-64 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.0E-64 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 248 270 1.0E-64 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 1.0E-64 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 1.0E-64 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.0E-64 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 219 231 1.0E-64 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 ProSitePatterns PS00433 Phosphofructokinase signature. 252 270 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 SUPERFAMILY SSF53784 3 318 2.88E-97 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 Pfam PF00365 Phosphofructokinase 4 283 6.5E-91 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 Gene3D G3DSA:3.40.50.460 144 260 1.6E-91 T 11-10-2018 AVL55_09820 dbbf37f3815ebf35b71e1d8636daec89 334 PIRSF PIRSF000532 1 332 6.3E-101 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 SUPERFAMILY SSF81301 38 167 2.07E-16 T 11-10-2018 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 37 872 3.6E-267 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 7.6E-34 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 Gene3D G3DSA:1.10.3210.10 441 580 3.2E-9 T 11-10-2018 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 Pfam PF01909 Nucleotidyltransferase domain 72 116 1.1E-5 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 SMART SM00471 448 594 2.6E-6 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 SUPERFAMILY SSF109604 417 541 1.3E-14 T 11-10-2018 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 Pfam PF01966 HD domain 478 558 7.6E-11 T 11-10-2018 IPR006674 HD domain AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 PIRSF PIRSF006288 9 880 3.2E-286 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 SUPERFAMILY SSF81593 197 313 2.28E-5 T 11-10-2018 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 SUPERFAMILY SSF55021 802 859 6.25E-6 T 11-10-2018 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 SUPERFAMILY SSF55021 696 767 2.08E-8 T 11-10-2018 AVL55_04680 67ddffbc67e024b4b6dec7c26c9fb383 883 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 883 269.944 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 Pfam PF05099 Tellurite resistance protein TerB 50 174 4.0E-15 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 SUPERFAMILY SSF158682 19 231 8.89E-28 T 11-10-2018 IPR029024 TerB-like AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 Pfam PF00226 DnaJ domain 219 280 4.8E-11 T 11-10-2018 IPR001623 DnaJ domain AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 PRINTS PR00625 DnaJ domain signature 263 283 5.6E-8 T 11-10-2018 IPR001623 DnaJ domain AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 PRINTS PR00625 DnaJ domain signature 221 239 5.6E-8 T 11-10-2018 IPR001623 DnaJ domain AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 PRINTS PR00625 DnaJ domain signature 239 254 5.6E-8 T 11-10-2018 IPR001623 DnaJ domain AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 Gene3D G3DSA:1.10.3680.10 44 192 1.7E-25 T 11-10-2018 IPR029024 TerB-like AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 1 284 37.786 T 11-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 SUPERFAMILY SSF46565 213 280 2.09E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 Gene3D G3DSA:1.10.287.110 193 283 6.1E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AVL55_03350 2eeded7154c8eece52e79a5f4445e119 284 SMART SM00271 218 283 1.4E-13 T 11-10-2018 IPR001623 DnaJ domain AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 SUPERFAMILY SSF50447 240 327 1.88E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 Gene3D G3DSA:3.40.50.300 1 236 9.9E-76 T 11-10-2018 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 Gene3D G3DSA:2.40.30.10 237 326 1.5E-27 T 11-10-2018 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 SUPERFAMILY SSF50465 331 431 8.15E-34 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 2.3E-198 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 Gene3D G3DSA:2.40.30.10 327 432 2.0E-35 T 11-10-2018 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 PRINTS PR00315 GTP-binding elongation factor signature 123 134 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 PRINTS PR00315 GTP-binding elongation factor signature 26 39 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 PRINTS PR00315 GTP-binding elongation factor signature 160 169 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 PRINTS PR00315 GTP-binding elongation factor signature 107 117 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 470 53.15 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 210 1.3E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 SUPERFAMILY SSF52540 17 233 8.65E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AVL55_06505 001b6e0c41c0c2a2b46a133ee76de427 471 Pfam PF00009 Elongation factor Tu GTP binding domain 23 228 4.3E-45 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 2.6E-13 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 SUPERFAMILY SSF50104 1 65 1.45E-13 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 1.3E-79 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 Gene3D G3DSA:2.30.30.30 1 64 1.7E-12 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 Gene3D G3DSA:2.40.50.140 67 129 1.1E-13 T 11-10-2018 AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 SMART SM01185 69 124 3.6E-15 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 PIRSF PIRSF005901 1 189 2.3E-61 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 SUPERFAMILY SSF50249 69 129 2.3E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 Pfam PF09285 Elongation factor P, C-terminal 132 187 3.6E-22 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 40.963 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 SMART SM00841 132 187 3.6E-31 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 SUPERFAMILY SSF50249 132 188 4.28E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 Gene3D G3DSA:2.40.50.140 131 188 1.4E-23 T 11-10-2018 AVL55_18415 467aea5ff95bf567cf7f87b81ff9ba95 191 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 1.6E-17 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 Gene3D G3DSA:3.40.50.300 7 213 2.4E-77 T 11-10-2018 AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 556 44.945 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 Gene3D G3DSA:3.30.70.330 484 556 2.8E-13 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 Gene3D G3DSA:3.40.50.300 216 442 4.3E-50 T 11-10-2018 AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 SUPERFAMILY SSF52540 5 210 5.52E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 Pfam PF03880 DbpA RNA binding domain 484 554 2.3E-23 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 Pfam PF00270 DEAD/DEAH box helicase 32 197 5.5E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 SMART SM00490 260 341 2.1E-33 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 Pfam PF00271 Helicase conserved C-terminal domain 233 341 1.4E-28 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 SUPERFAMILY SSF52540 148 355 5.66E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02810 a45ac45f5587cd7ddff0a559f1a91350 596 SMART SM00487 26 224 2.2E-63 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_06325 95b96693ed0e379d161b6dc807da008c 640 SUPERFAMILY SSF52540 75 363 4.2E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06325 95b96693ed0e379d161b6dc807da008c 640 SMART SM00763 19 376 4.2E-214 T 11-10-2018 IPR013153 PrkA AAA domain AVL55_06325 95b96693ed0e379d161b6dc807da008c 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 8.9E-75 T 11-10-2018 IPR010650 PrkA C-terminal domain AVL55_06325 95b96693ed0e379d161b6dc807da008c 640 PIRSF PIRSF000549 1 640 1.1E-291 T 11-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AVL55_06325 95b96693ed0e379d161b6dc807da008c 640 Pfam PF08298 PrkA AAA domain 20 376 3.4E-174 T 11-10-2018 IPR013153 PrkA AAA domain AVL55_20050 658cc093780ad33504d2be02c902ba58 633 SUPERFAMILY SSF51905 7 261 3.4E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_20050 658cc093780ad33504d2be02c902ba58 633 SMART SM01228 546 617 8.3E-43 T 11-10-2018 AVL55_20050 658cc093780ad33504d2be02c902ba58 633 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AVL55_20050 658cc093780ad33504d2be02c902ba58 633 Pfam PF01134 Glucose inhibited division protein A 8 399 3.3E-168 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AVL55_20050 658cc093780ad33504d2be02c902ba58 633 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AVL55_20050 658cc093780ad33504d2be02c902ba58 633 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 8.1E-284 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AVL55_20050 658cc093780ad33504d2be02c902ba58 633 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.898 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AVL55_20050 658cc093780ad33504d2be02c902ba58 633 Gene3D G3DSA:1.10.10.1800 459 550 4.7E-30 T 11-10-2018 AVL55_20050 658cc093780ad33504d2be02c902ba58 633 Gene3D G3DSA:3.50.50.60 304 458 2.2E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_20050 658cc093780ad33504d2be02c902ba58 633 Gene3D G3DSA:3.50.50.60 1 220 4.9E-91 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_20050 658cc093780ad33504d2be02c902ba58 633 Pfam PF13932 GidA associated domain 401 616 8.8E-75 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AVL55_20050 658cc093780ad33504d2be02c902ba58 633 Gene3D G3DSA:1.10.150.570 570 622 4.1E-23 T 11-10-2018 AVL55_10020 9d8fe7f9fadfdb92361aa9268cab6269 325 Gene3D G3DSA:3.40.50.920 194 324 1.1E-52 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AVL55_10020 9d8fe7f9fadfdb92361aa9268cab6269 325 SUPERFAMILY SSF52922 189 324 4.32E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AVL55_10020 9d8fe7f9fadfdb92361aa9268cab6269 325 SMART SM00861 4 180 1.7E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AVL55_10020 9d8fe7f9fadfdb92361aa9268cab6269 325 Gene3D G3DSA:3.40.50.970 1 193 1.4E-89 T 11-10-2018 AVL55_10020 9d8fe7f9fadfdb92361aa9268cab6269 325 SUPERFAMILY SSF52518 1 205 4.0E-72 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_10020 9d8fe7f9fadfdb92361aa9268cab6269 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 2.2E-51 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AVL55_10020 9d8fe7f9fadfdb92361aa9268cab6269 325 Pfam PF02780 Transketolase, C-terminal domain 195 312 2.4E-35 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AVL55_11850 dd23813952fd421cf7117918896e011d 1207 SUPERFAMILY SSF52540 2 337 1.33E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11850 dd23813952fd421cf7117918896e011d 1207 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 782 7.8E-237 T 11-10-2018 AVL55_11850 dd23813952fd421cf7117918896e011d 1207 Gene3D G3DSA:3.40.50.300 327 783 2.9E-143 T 11-10-2018 AVL55_11850 dd23813952fd421cf7117918896e011d 1207 Gene3D G3DSA:1.10.10.160 80 187 1.1E-84 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AVL55_11850 dd23813952fd421cf7117918896e011d 1207 SUPERFAMILY SSF52540 348 783 8.36E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11850 dd23813952fd421cf7117918896e011d 1207 Gene3D G3DSA:1.10.486.10 444 654 2.9E-143 T 11-10-2018 AVL55_11850 dd23813952fd421cf7117918896e011d 1207 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1049 2.8E-223 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AVL55_11850 dd23813952fd421cf7117918896e011d 1207 PIRSF PIRSF000980 1 1139 4.9E-238 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AVL55_11850 dd23813952fd421cf7117918896e011d 1207 Gene3D G3DSA:3.40.50.10930 4 297 1.1E-84 T 11-10-2018 AVL55_11850 dd23813952fd421cf7117918896e011d 1207 SUPERFAMILY SSF52980 826 1066 2.36E-14 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AVL55_11850 dd23813952fd421cf7117918896e011d 1207 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1089 17.183 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 Pfam PF03466 LysR substrate binding domain 91 292 1.8E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 Gene3D G3DSA:3.40.190.10 92 303 1.1E-99 T 11-10-2018 AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 SUPERFAMILY SSF53850 92 322 8.31E-44 T 11-10-2018 AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 4.0E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 Gene3D G3DSA:1.10.10.10 1 86 4.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 Gene3D G3DSA:3.40.190.10 167 267 1.1E-99 T 11-10-2018 AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_09980 462293fabd8af3582184577a1fbdc81a 324 SUPERFAMILY SSF46785 1 86 5.28E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_00955 098502e2b25355ee573470c41c179c9c 520 Pfam PF00474 Sodium:solute symporter family 39 438 5.1E-70 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_00955 098502e2b25355ee573470c41c179c9c 520 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 437 2.4E-107 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_00955 098502e2b25355ee573470c41c179c9c 520 Gene3D G3DSA:1.20.1730.10 27 520 1.2E-165 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 Pfam PF01202 Shikimate kinase 13 169 2.1E-56 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 31 44 6.2E-28 T 11-10-2018 AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 77 86 6.2E-28 T 11-10-2018 AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 7 22 6.2E-28 T 11-10-2018 AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 59 67 6.2E-28 T 11-10-2018 AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 98 115 6.2E-28 T 11-10-2018 AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.176 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 Gene3D G3DSA:3.40.50.300 1 170 1.5E-57 T 11-10-2018 AVL55_01915 3a62ec3884aa67f278242816d02673eb 171 SUPERFAMILY SSF52540 4 168 8.42E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 446 1.2E-53 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 PIRSF PIRSF000538 2 493 4.1E-167 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 SUPERFAMILY SSF53067 4 253 2.81E-95 T 11-10-2018 AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 Gene3D G3DSA:3.30.420.40 252 492 3.2E-81 T 11-10-2018 AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 490 8.4E-217 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 Gene3D G3DSA:3.30.420.40 2 251 8.8E-106 T 11-10-2018 AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 Hamap MF_00186 Glycerol kinase [glpK]. 2 492 53.434 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 1.3E-79 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AVL55_16350 e85278bacd309bb13cad16e2935462f7 493 SUPERFAMILY SSF53067 253 490 1.97E-73 T 11-10-2018 AVL55_02040 e870cb4d00ef66393edd0ca7bfbfe5a9 154 PIRSF PIRSF029256 1 154 2.5E-66 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AVL55_02040 e870cb4d00ef66393edd0ca7bfbfe5a9 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.682 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AVL55_02040 e870cb4d00ef66393edd0ca7bfbfe5a9 154 Gene3D G3DSA:3.40.1280.10 1 154 8.0E-67 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AVL55_02040 e870cb4d00ef66393edd0ca7bfbfe5a9 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 2.1E-63 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AVL55_02040 e870cb4d00ef66393edd0ca7bfbfe5a9 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.2E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AVL55_02040 e870cb4d00ef66393edd0ca7bfbfe5a9 154 SUPERFAMILY SSF75217 2 152 2.35E-44 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AVL55_07100 19a309bade56522fcc7ee70694259cb1 454 Pfam PF02386 Cation transport protein 43 435 1.8E-56 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AVL55_07100 19a309bade56522fcc7ee70694259cb1 454 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 44 426 5.2E-108 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AVL55_15250 a852e4c2de7757626a785a222bd3cffe 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15250 a852e4c2de7757626a785a222bd3cffe 360 Pfam PF00953 Glycosyl transferase family 4 99 283 9.0E-37 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AVL55_15250 a852e4c2de7757626a785a222bd3cffe 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.4E-6 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15250 a852e4c2de7757626a785a222bd3cffe 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 2.4E-145 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15250 a852e4c2de7757626a785a222bd3cffe 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.245 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15250 a852e4c2de7757626a785a222bd3cffe 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_19355 0fdff220782d55ba8a542c14e65424af 208 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 8.9E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19355 0fdff220782d55ba8a542c14e65424af 208 SUPERFAMILY SSF54523 14 96 5.96E-9 T 11-10-2018 AVL55_19355 0fdff220782d55ba8a542c14e65424af 208 PRINTS PR00885 Bacterial general secretion pathway protein H signature 158 173 2.7E-15 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AVL55_19355 0fdff220782d55ba8a542c14e65424af 208 PRINTS PR00885 Bacterial general secretion pathway protein H signature 9 23 2.7E-15 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AVL55_19355 0fdff220782d55ba8a542c14e65424af 208 PRINTS PR00885 Bacterial general secretion pathway protein H signature 24 38 2.7E-15 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AVL55_19355 0fdff220782d55ba8a542c14e65424af 208 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 32 2.3E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19355 0fdff220782d55ba8a542c14e65424af 208 Gene3D G3DSA:3.55.40.10 41 207 6.1E-44 T 11-10-2018 AVL55_19355 0fdff220782d55ba8a542c14e65424af 208 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 11 179 6.8E-16 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AVL55_11750 ea3b12cf8b766c5e8f72775f7d28d0c2 457 ProSitePatterns PS01276 Peptidase family U32 signature. 147 165 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AVL55_11750 ea3b12cf8b766c5e8f72775f7d28d0c2 457 Pfam PF01136 Peptidase family U32 63 332 1.3E-96 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AVL55_11750 ea3b12cf8b766c5e8f72775f7d28d0c2 457 Gene3D G3DSA:2.40.30.10 344 431 1.0E-12 T 11-10-2018 AVL55_11750 ea3b12cf8b766c5e8f72775f7d28d0c2 457 Pfam PF16325 Peptidase family U32 C-terminal domain 348 430 8.5E-21 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal AVL55_06435 69f538cf10062b003233f97f8568a936 193 PIRSF PIRSF006102 1 193 3.4E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AVL55_06435 69f538cf10062b003233f97f8568a936 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.766 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AVL55_06435 69f538cf10062b003233f97f8568a936 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.1E-86 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AVL55_06435 69f538cf10062b003233f97f8568a936 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 190 6.8E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AVL55_02450 7b16b9bcb26aa6349cd53a2649263df7 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 8 87 6.9E-41 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AVL55_02450 7b16b9bcb26aa6349cd53a2649263df7 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 8 87 2.0E-33 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AVL55_02450 7b16b9bcb26aa6349cd53a2649263df7 87 Gene3D G3DSA:3.30.2310.20 5 87 4.1E-39 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AVL55_02450 7b16b9bcb26aa6349cd53a2649263df7 87 SUPERFAMILY SSF143011 6 86 7.06E-27 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 75 89 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 42 168 6.8E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 Pfam PF00107 Zinc-binding dehydrogenase 211 331 2.1E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 Gene3D G3DSA:3.40.50.720 188 326 2.3E-153 T 11-10-2018 AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 SUPERFAMILY SSF51735 174 347 1.17E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 SUPERFAMILY SSF50129 13 199 1.98E-73 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 Gene3D G3DSA:3.90.180.10 20 378 2.3E-153 T 11-10-2018 AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 SMART SM00829 24 381 0.0047 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 16 383 1.6E-228 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AVL55_15545 fe0cf86d12e8990c61779a97bec3509e 385 SUPERFAMILY SSF50129 332 382 1.93E-11 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_12130 058080a65cc2ba2a2327524990ecd70a 608 Pfam PF00920 Dehydratase family 65 598 3.8E-157 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_12130 058080a65cc2ba2a2327524990ecd70a 608 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_12130 058080a65cc2ba2a2327524990ecd70a 608 SUPERFAMILY SSF52016 419 603 1.96E-57 T 11-10-2018 AVL55_12130 058080a65cc2ba2a2327524990ecd70a 608 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 1 602 58.194 T 11-10-2018 AVL55_12130 058080a65cc2ba2a2327524990ecd70a 608 SUPERFAMILY SSF143975 1 418 2.22E-145 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_12130 058080a65cc2ba2a2327524990ecd70a 608 Gene3D G3DSA:3.50.30.80 419 569 2.6E-50 T 11-10-2018 AVL55_12130 058080a65cc2ba2a2327524990ecd70a 608 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 0.0 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AVL55_12130 058080a65cc2ba2a2327524990ecd70a 608 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AVL55_15065 095f9bd55aed2a596f0bb13b50c6c6dc 218 SUPERFAMILY SSF100950 1 146 2.88E-45 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_15065 095f9bd55aed2a596f0bb13b50c6c6dc 218 Gene3D G3DSA:3.40.50.1360 7 206 1.2E-77 T 11-10-2018 AVL55_15065 095f9bd55aed2a596f0bb13b50c6c6dc 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 2.1E-70 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AVL55_15065 095f9bd55aed2a596f0bb13b50c6c6dc 218 SUPERFAMILY SSF75445 127 198 1.83E-24 T 11-10-2018 AVL55_15065 095f9bd55aed2a596f0bb13b50c6c6dc 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.714 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AVL55_15065 095f9bd55aed2a596f0bb13b50c6c6dc 218 Gene3D G3DSA:3.30.70.260 125 196 1.2E-77 T 11-10-2018 AVL55_15065 095f9bd55aed2a596f0bb13b50c6c6dc 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 212 1.2E-58 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AVL55_02830 8a40a6cb7235c4d6fec2c5b10392ccf7 208 ProSitePatterns PS00893 Nudix box signature. 94 115 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AVL55_02830 8a40a6cb7235c4d6fec2c5b10392ccf7 208 Gene3D G3DSA:3.90.79.10 2 206 6.8E-61 T 11-10-2018 AVL55_02830 8a40a6cb7235c4d6fec2c5b10392ccf7 208 SUPERFAMILY SSF55811 9 203 7.45E-44 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_02830 8a40a6cb7235c4d6fec2c5b10392ccf7 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 194 3.9E-60 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AVL55_02830 8a40a6cb7235c4d6fec2c5b10392ccf7 208 Pfam PF00293 NUDIX domain 54 173 1.3E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AVL55_05650 4227024f11eb21e02327217eb7bb0894 336 SUPERFAMILY SSF56672 1 152 2.67E-40 T 11-10-2018 AVL55_05650 4227024f11eb21e02327217eb7bb0894 336 Pfam PF13438 Domain of unknown function (DUF4113) 286 335 1.6E-22 T 11-10-2018 IPR025188 Domain of unknown function DUF4113 AVL55_05650 4227024f11eb21e02327217eb7bb0894 336 Gene3D G3DSA:3.30.70.270 1 77 3.2E-17 T 11-10-2018 AVL55_05650 4227024f11eb21e02327217eb7bb0894 336 Gene3D G3DSA:1.10.150.20 88 145 3.2E-10 T 11-10-2018 AVL55_05650 4227024f11eb21e02327217eb7bb0894 336 SUPERFAMILY SSF100879 159 263 5.89E-7 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_05650 4227024f11eb21e02327217eb7bb0894 336 Gene3D G3DSA:3.30.1490.100 159 268 3.6E-6 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_05650 4227024f11eb21e02327217eb7bb0894 336 Pfam PF11799 impB/mucB/samB family C-terminal domain 156 266 1.9E-16 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_05650 4227024f11eb21e02327217eb7bb0894 336 Pfam PF11798 IMS family HHH motif 84 115 4.1E-6 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AVL55_05650 4227024f11eb21e02327217eb7bb0894 336 Pfam PF00817 impB/mucB/samB family 2 66 1.0E-13 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 Gene3D G3DSA:3.40.50.620 1 162 1.9E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 SUPERFAMILY SSF52374 4 156 5.63E-46 T 11-10-2018 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.4E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.4E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.4E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.4E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.4E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.808 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 1.4E-58 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 1.4E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 69 2.0E-4 T 11-10-2018 AVL55_00290 cbd0b3db835b480e15f7463d0eebc4b8 162 Pfam PF01467 Cytidylyltransferase-like 6 134 5.7E-25 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AVL55_18125 77d2df80a219c0a825c90a6ef01987c4 763 Gene3D G3DSA:2.40.170.20 173 763 5.6E-178 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_18125 77d2df80a219c0a825c90a6ef01987c4 763 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 163 7.4E-27 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_18125 77d2df80a219c0a825c90a6ef01987c4 763 SUPERFAMILY SSF56935 33 763 5.95E-124 T 11-10-2018 AVL55_18125 77d2df80a219c0a825c90a6ef01987c4 763 Gene3D G3DSA:2.170.130.10 23 168 3.2E-39 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_18125 77d2df80a219c0a825c90a6ef01987c4 763 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 746 763 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AVL55_18125 77d2df80a219c0a825c90a6ef01987c4 763 Pfam PF00593 TonB dependent receptor 275 762 1.1E-55 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_02950 7c1e389860f46f57d2df45b6f8a3e6cc 521 Gene3D G3DSA:3.30.750.24 409 501 6.8E-29 T 11-10-2018 IPR036513 STAS domain superfamily AVL55_02950 7c1e389860f46f57d2df45b6f8a3e6cc 521 Pfam PF00916 Sulfate permease family 13 376 2.1E-54 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AVL55_02950 7c1e389860f46f57d2df45b6f8a3e6cc 521 Pfam PF01740 STAS domain 418 505 1.2E-10 T 11-10-2018 IPR002645 STAS domain AVL55_02950 7c1e389860f46f57d2df45b6f8a3e6cc 521 SUPERFAMILY SSF52091 416 500 3.73E-14 T 11-10-2018 IPR036513 STAS domain superfamily AVL55_09705 2c7ccbb2c1ac30a60fdb1c6c220fd0de 348 Pfam PF01343 Peptidase family S49 162 302 2.1E-39 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AVL55_09705 2c7ccbb2c1ac30a60fdb1c6c220fd0de 348 Pfam PF08496 Peptidase family S49 N-terminal 2 158 1.1E-56 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AVL55_09705 2c7ccbb2c1ac30a60fdb1c6c220fd0de 348 Gene3D G3DSA:3.40.1750.20 202 266 1.6E-38 T 11-10-2018 AVL55_09705 2c7ccbb2c1ac30a60fdb1c6c220fd0de 348 SUPERFAMILY SSF52096 99 299 4.81E-26 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_09705 2c7ccbb2c1ac30a60fdb1c6c220fd0de 348 Gene3D G3DSA:3.90.226.10 105 301 1.6E-38 T 11-10-2018 AVL55_06690 a08b1cc15d25b4e53eb0a4a3153a97d7 83 SUPERFAMILY SSF54565 1 79 3.79E-28 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06690 a08b1cc15d25b4e53eb0a4a3153a97d7 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.4E-28 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06690 a08b1cc15d25b4e53eb0a4a3153a97d7 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.558 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06690 a08b1cc15d25b4e53eb0a4a3153a97d7 83 Gene3D G3DSA:3.30.1320.10 1 82 1.4E-30 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06690 a08b1cc15d25b4e53eb0a4a3153a97d7 83 Pfam PF00886 Ribosomal protein S16 8 68 5.8E-24 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17145 b9c0b2b4014580ccb06a829200872ae2 168 SUPERFAMILY SSF82153 28 163 9.29E-44 T 11-10-2018 IPR036378 FAS1 domain superfamily AVL55_17145 b9c0b2b4014580ccb06a829200872ae2 168 Pfam PF02469 Fasciclin domain 39 161 3.6E-37 T 11-10-2018 IPR000782 FAS1 domain AVL55_17145 b9c0b2b4014580ccb06a829200872ae2 168 SMART SM00554 63 162 4.8E-32 T 11-10-2018 IPR000782 FAS1 domain AVL55_17145 b9c0b2b4014580ccb06a829200872ae2 168 Gene3D G3DSA:2.30.180.10 11 162 1.5E-49 T 11-10-2018 IPR036378 FAS1 domain superfamily AVL55_06865 206b32d6e78970514c88ed269b3a7205 351 Pfam PF02445 Quinolinate synthetase A protein 32 340 2.7E-104 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AVL55_06865 206b32d6e78970514c88ed269b3a7205 351 SUPERFAMILY SSF142754 28 341 5.89E-109 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AVL55_06865 206b32d6e78970514c88ed269b3a7205 351 Gene3D G3DSA:3.40.50.10800 115 339 5.1E-97 T 11-10-2018 AVL55_06865 206b32d6e78970514c88ed269b3a7205 351 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 27 342 4.9E-116 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AVL55_06865 206b32d6e78970514c88ed269b3a7205 351 Gene3D G3DSA:3.40.50.10800 31 322 5.1E-97 T 11-10-2018 AVL55_06865 206b32d6e78970514c88ed269b3a7205 351 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 67.883 T 11-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AVL55_06865 206b32d6e78970514c88ed269b3a7205 351 Gene3D G3DSA:3.40.50.10800 200 295 5.1E-97 T 11-10-2018 AVL55_18135 3489fd240a89d59e00106f23e5335478 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 83 176 3.6E-15 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AVL55_18135 3489fd240a89d59e00106f23e5335478 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 43.43 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 AVL55_18135 3489fd240a89d59e00106f23e5335478 226 Gene3D G3DSA:2.60.120.620 1 178 7.7E-44 T 11-10-2018 AVL55_18135 3489fd240a89d59e00106f23e5335478 226 Gene3D G3DSA:4.10.860.20 180 226 5.2E-21 T 11-10-2018 AVL55_18135 3489fd240a89d59e00106f23e5335478 226 SMART SM00702 1 177 8.3E-19 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.8E-34 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 Gene3D G3DSA:2.40.50.140 1 114 2.9E-49 T 11-10-2018 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 5 273 7.1E-133 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 SUPERFAMILY SSF50104 127 272 6.62E-63 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 PIRSF PIRSF002158 12 274 5.4E-103 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 SUPERFAMILY SSF50249 4 125 4.8E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.551 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 4.0E-58 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 SMART SM01382 124 252 2.2E-95 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 SMART SM01383 42 118 2.0E-47 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 Gene3D G3DSA:2.30.30.30 115 195 2.4E-34 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AVL55_01605 80fef7ef6250de8463fcc8e10e24effd 274 Gene3D G3DSA:4.10.950.10 196 274 1.3E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_14935 43c3e3eece1cb0a88a1e1398cfbd2f1f 275 Gene3D G3DSA:3.40.50.300 29 273 1.0E-52 T 11-10-2018 AVL55_14935 43c3e3eece1cb0a88a1e1398cfbd2f1f 275 Pfam PF00005 ABC transporter 46 201 1.4E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_14935 43c3e3eece1cb0a88a1e1398cfbd2f1f 275 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 30 271 1.2E-113 T 11-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AVL55_14935 43c3e3eece1cb0a88a1e1398cfbd2f1f 275 SUPERFAMILY SSF52540 30 272 5.33E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14935 43c3e3eece1cb0a88a1e1398cfbd2f1f 275 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 249 270 3.8E-8 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AVL55_03535 9e95d249111f6fa2582df71a7f954102 281 Pfam PF03668 P-loop ATPase protein family 2 280 1.7E-106 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AVL55_03535 9e95d249111f6fa2582df71a7f954102 281 PIRSF PIRSF005052 1 281 4.4E-106 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AVL55_03535 9e95d249111f6fa2582df71a7f954102 281 Gene3D G3DSA:3.40.50.300 1 163 4.8E-8 T 11-10-2018 AVL55_03535 9e95d249111f6fa2582df71a7f954102 281 SUPERFAMILY SSF52540 2 153 1.04E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_03535 9e95d249111f6fa2582df71a7f954102 281 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.276 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AVL55_05295 f86b5c49ed43bce8f5ff2751b89609c4 545 Gene3D G3DSA:3.30.750.24 407 535 1.3E-19 T 11-10-2018 IPR036513 STAS domain superfamily AVL55_05295 f86b5c49ed43bce8f5ff2751b89609c4 545 SUPERFAMILY SSF52091 421 526 1.49E-13 T 11-10-2018 IPR036513 STAS domain superfamily AVL55_05295 f86b5c49ed43bce8f5ff2751b89609c4 545 Pfam PF00916 Sulfate permease family 9 365 1.3E-81 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AVL55_05295 f86b5c49ed43bce8f5ff2751b89609c4 545 Pfam PF01740 STAS domain 424 521 1.2E-9 T 11-10-2018 IPR002645 STAS domain AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 TIGRFAM TIGR03785 marine_sort_HK: proteobacterial dedicated sortase system histidine kinase 7 719 1.9E-280 T 11-10-2018 IPR022510 Sortase system, histidine kinase AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 SUPERFAMILY SSF49344 78 253 7.45E-9 T 11-10-2018 AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 613 720 1.7E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 SMART SM00387 607 721 2.0E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 SUPERFAMILY SSF55874 553 721 1.7E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 SMART SM00388 498 563 3.4E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 Gene3D G3DSA:3.30.565.10 558 721 3.7E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 Gene3D G3DSA:1.10.287.130 440 556 7.9E-17 T 11-10-2018 AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 SUPERFAMILY SSF47384 482 561 8.04E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 Gene3D G3DSA:2.60.40.1190 83 270 2.0E-10 T 11-10-2018 AVL55_18035 31814456ab5a84517c2beaf0ebd22a04 722 Pfam PF00512 His Kinase A (phospho-acceptor) domain 500 562 4.9E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_09740 05d811277678be6eb4bcb7355ef47e55 291 Gene3D G3DSA:3.40.50.720 1 169 5.5E-48 T 11-10-2018 AVL55_09740 05d811277678be6eb4bcb7355ef47e55 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 164 3.6E-48 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AVL55_09740 05d811277678be6eb4bcb7355ef47e55 291 SUPERFAMILY SSF48179 169 290 1.59E-38 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_09740 05d811277678be6eb4bcb7355ef47e55 291 Gene3D G3DSA:1.10.1040.10 170 291 9.7E-37 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AVL55_09740 05d811277678be6eb4bcb7355ef47e55 291 PIRSF PIRSF000103 1 291 1.6E-65 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AVL55_09740 05d811277678be6eb4bcb7355ef47e55 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 288 3.4E-33 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AVL55_09740 05d811277678be6eb4bcb7355ef47e55 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AVL55_09740 05d811277678be6eb4bcb7355ef47e55 291 SUPERFAMILY SSF51735 4 167 1.13E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_12910 838e1662c25a7f1bfee2fb98ecebcd75 217 PIRSF PIRSF004982 1 183 8.3E-45 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AVL55_12910 838e1662c25a7f1bfee2fb98ecebcd75 217 Pfam PF03843 Outer membrane lipoprotein Slp family 14 163 5.8E-43 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AVL55_12910 838e1662c25a7f1bfee2fb98ecebcd75 217 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 7 173 2.4E-29 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AVL55_09765 05481697948d227064a1e0d40c4719fe 195 Gene3D G3DSA:3.40.50.1000 1 185 1.2E-51 T 11-10-2018 IPR023214 HAD superfamily AVL55_09765 05481697948d227064a1e0d40c4719fe 195 Pfam PF13242 HAD-hyrolase-like 109 154 4.2E-10 T 11-10-2018 AVL55_09765 05481697948d227064a1e0d40c4719fe 195 SUPERFAMILY SSF56784 5 156 8.68E-41 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_09765 05481697948d227064a1e0d40c4719fe 195 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 151 3.6E-28 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AVL55_09765 05481697948d227064a1e0d40c4719fe 195 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 7 153 3.9E-37 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AVL55_09765 05481697948d227064a1e0d40c4719fe 195 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 7 157 1.4E-50 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 SUPERFAMILY SSF55781 2 121 6.45E-20 T 11-10-2018 AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 Pfam PF01590 GAF domain 24 119 2.1E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 Pfam PF00437 Type II/IV secretion system protein 318 578 1.5E-73 T 11-10-2018 IPR001482 Type II/IV secretion system protein AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 506 520 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 167 269 2.3E-8 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 SUPERFAMILY SSF160246 137 266 8.11E-8 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 SUPERFAMILY SSF52540 296 690 1.52E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 Gene3D G3DSA:3.30.450.90 277 412 6.7E-42 T 11-10-2018 AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 Gene3D G3DSA:3.30.450.40 1 126 1.0E-24 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 Gene3D G3DSA:3.40.50.300 414 693 3.5E-103 T 11-10-2018 AVL55_01580 f83a98a2fdc9d04c3ffb323e25d38efe 696 SMART SM00382 439 564 5.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 423 6.2E-137 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 SMART SM00388 205 271 1.5E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 427 5.6E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 270 1.2E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 Gene3D G3DSA:1.10.287.130 202 271 3.8E-24 T 11-10-2018 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 1.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 SMART SM00387 316 428 8.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 SUPERFAMILY SSF55785 90 197 6.07E-8 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 SUPERFAMILY SSF55874 260 424 3.14E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.7E-27 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 SUPERFAMILY SSF47384 192 270 2.75E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 Gene3D G3DSA:3.30.565.10 275 430 9.9E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03195 0631187bd7149fc94921eda967d85c1e 433 Gene3D G3DSA:3.30.450.20 86 201 5.7E-5 T 11-10-2018 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 SUPERFAMILY SSF53223 1 122 2.3E-40 T 11-10-2018 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.1E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.1E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.1E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.1E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.1E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.1E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.1E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.818 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 Gene3D G3DSA:3.40.50.720 6 259 2.5E-109 T 11-10-2018 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 Gene3D G3DSA:3.40.50.10860 8 276 2.5E-109 T 11-10-2018 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 2.6E-40 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 SUPERFAMILY SSF51735 123 280 1.53E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_13685 7d38aae1f31f92730d45ff86463bbd6a 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 9.5E-69 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AVL55_15805 cc21a690cd8194907ec654dda4bc86de 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 230 1.3E-80 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AVL55_15805 cc21a690cd8194907ec654dda4bc86de 233 Gene3D G3DSA:3.40.50.1580 1 233 5.8E-68 T 11-10-2018 AVL55_15805 cc21a690cd8194907ec654dda4bc86de 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 3 231 42.752 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AVL55_15805 cc21a690cd8194907ec654dda4bc86de 233 SUPERFAMILY SSF53167 3 231 2.23E-69 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AVL55_15805 cc21a690cd8194907ec654dda4bc86de 233 Pfam PF01048 Phosphorylase superfamily 3 228 2.2E-48 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AVL55_14950 b48b25c8305c9d4ef14d2b1d3174b563 424 Gene3D G3DSA:3.40.50.2300 30 364 6.6E-133 T 11-10-2018 AVL55_14950 b48b25c8305c9d4ef14d2b1d3174b563 424 Pfam PF13433 Periplasmic binding protein domain 28 396 7.6E-174 T 11-10-2018 AVL55_14950 b48b25c8305c9d4ef14d2b1d3174b563 424 Gene3D G3DSA:3.40.50.2300 143 384 6.6E-133 T 11-10-2018 AVL55_14950 b48b25c8305c9d4ef14d2b1d3174b563 424 SUPERFAMILY SSF53822 27 400 8.72E-89 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_14950 b48b25c8305c9d4ef14d2b1d3174b563 424 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 28 393 2.2E-173 T 11-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 Pfam PF00694 Aconitase C-terminal domain 706 832 1.7E-47 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 ProSitePatterns PS01244 Aconitase family signature 2. 508 521 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 Gene3D G3DSA:1.10.1440.20 606 665 2.5E-18 T 11-10-2018 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 Gene3D G3DSA:3.20.19.10 668 904 2.7E-104 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 Gene3D G3DSA:3.30.499.10 369 605 1.9E-99 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 PRINTS PR00415 Aconitase family signature 198 211 1.1E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 PRINTS PR00415 Aconitase family signature 141 154 1.1E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 PRINTS PR00415 Aconitase family signature 508 521 1.1E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 PRINTS PR00415 Aconitase family signature 212 227 1.1E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 PRINTS PR00415 Aconitase family signature 274 287 1.1E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 PRINTS PR00415 Aconitase family signature 288 301 1.1E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 PRINTS PR00415 Aconitase family signature 446 457 1.1E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 PRINTS PR00415 Aconitase family signature 165 173 1.1E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 PRINTS PR00415 Aconitase family signature 368 382 1.1E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 Pfam PF00330 Aconitase family (aconitate hydratase) 64 577 2.3E-182 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 26 903 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 SUPERFAMILY SSF52016 650 903 1.96E-80 T 11-10-2018 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 ProSitePatterns PS00450 Aconitase family signature 1. 442 458 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 Gene3D G3DSA:3.30.499.20 3 368 6.9E-161 T 11-10-2018 AVL55_01570 f958b6fde580ebe6693c16aaafe00116 905 SUPERFAMILY SSF53732 5 641 2.09E-224 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AVL55_17695 9a0b10c739fbf0d5257c4f48cb41bdc3 265 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 172 186 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AVL55_17695 9a0b10c739fbf0d5257c4f48cb41bdc3 265 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 30 264 39.352 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AVL55_17695 9a0b10c739fbf0d5257c4f48cb41bdc3 265 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 50 65 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AVL55_17695 9a0b10c739fbf0d5257c4f48cb41bdc3 265 Gene3D G3DSA:3.40.50.150 45 265 4.6E-76 T 11-10-2018 AVL55_17695 9a0b10c739fbf0d5257c4f48cb41bdc3 265 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 39 264 4.5E-87 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AVL55_17695 9a0b10c739fbf0d5257c4f48cb41bdc3 265 SUPERFAMILY SSF53335 34 263 2.79E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_17695 9a0b10c739fbf0d5257c4f48cb41bdc3 265 Pfam PF01209 ubiE/COQ5 methyltransferase family 34 264 5.8E-102 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AVL55_02395 157e56e76f9bf6f61f1ddcd0e57191f5 418 Pfam PF00464 Serine hydroxymethyltransferase 8 386 3.2E-184 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AVL55_02395 157e56e76f9bf6f61f1ddcd0e57191f5 418 PIRSF PIRSF000412 1 414 5.1E-172 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AVL55_02395 157e56e76f9bf6f61f1ddcd0e57191f5 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AVL55_02395 157e56e76f9bf6f61f1ddcd0e57191f5 418 SUPERFAMILY SSF53383 4 416 1.1E-180 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_02395 157e56e76f9bf6f61f1ddcd0e57191f5 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 51.856 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AVL55_02395 157e56e76f9bf6f61f1ddcd0e57191f5 418 Gene3D G3DSA:3.40.640.10 37 289 4.8E-190 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_02395 157e56e76f9bf6f61f1ddcd0e57191f5 418 Gene3D G3DSA:3.90.1150.10 10 395 4.8E-190 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_12700 0114905c4b6651d253ed103b704af9f7 164 SUPERFAMILY SSF55729 3 163 2.88E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_12700 0114905c4b6651d253ed103b704af9f7 164 Gene3D G3DSA:3.40.630.30 2 163 1.3E-37 T 11-10-2018 AVL55_12700 0114905c4b6651d253ed103b704af9f7 164 Pfam PF13302 Acetyltransferase (GNAT) domain 4 139 1.7E-22 T 11-10-2018 IPR000182 GNAT domain AVL55_13850 3e5b4ab44e6d1a8dfe795e1bd0c26945 254 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 236 2.9E-85 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AVL55_13850 3e5b4ab44e6d1a8dfe795e1bd0c26945 254 Gene3D G3DSA:1.10.8.590 165 245 2.1E-28 T 11-10-2018 AVL55_13850 3e5b4ab44e6d1a8dfe795e1bd0c26945 254 PIRSF PIRSF004808 1 241 2.3E-75 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AVL55_13850 3e5b4ab44e6d1a8dfe795e1bd0c26945 254 SUPERFAMILY SSF75217 4 184 1.18E-36 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AVL55_13850 3e5b4ab44e6d1a8dfe795e1bd0c26945 254 Gene3D G3DSA:3.40.1280.10 1 164 2.6E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AVL55_13850 3e5b4ab44e6d1a8dfe795e1bd0c26945 254 Pfam PF00588 SpoU rRNA Methylase family 5 154 4.3E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AVL55_13840 301bc8670324199dae1289aa4e4f4319 303 Gene3D G3DSA:3.40.50.1820 10 298 7.5E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_13840 301bc8670324199dae1289aa4e4f4319 303 Pfam PF00561 alpha/beta hydrolase fold 31 275 2.8E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_13840 301bc8670324199dae1289aa4e4f4319 303 SUPERFAMILY SSF53474 7 297 1.89E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_06420 030d99e580e5a3bdd5e2db57ecbb8c54 360 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 353 26.652 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AVL55_06420 030d99e580e5a3bdd5e2db57ecbb8c54 360 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 352 3.9E-127 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AVL55_06420 030d99e580e5a3bdd5e2db57ecbb8c54 360 Pfam PF03116 NQR2, RnfD, RnfE family 5 351 2.6E-103 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AVL55_00480 88d679ef90d7b9b3bf78ee093ba7bd54 253 Pfam PF00753 Metallo-beta-lactamase superfamily 11 209 1.9E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_00480 88d679ef90d7b9b3bf78ee093ba7bd54 253 Gene3D G3DSA:3.60.15.10 1 250 1.5E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_00480 88d679ef90d7b9b3bf78ee093ba7bd54 253 SUPERFAMILY SSF56281 8 225 3.93E-34 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_00480 88d679ef90d7b9b3bf78ee093ba7bd54 253 SMART SM00849 10 209 1.8E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 Gene3D G3DSA:3.20.20.450 686 946 1.1E-73 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 Pfam PF00563 EAL domain 704 939 1.7E-56 T 11-10-2018 IPR001633 EAL domain AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 400 518 9.7E-16 T 11-10-2018 IPR000014 PAS domain AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 SMART SM00052 697 944 2.7E-59 T 11-10-2018 IPR001633 EAL domain AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 Pfam PF00990 Diguanylate cyclase, GGDEF domain 526 681 1.8E-34 T 11-10-2018 IPR000160 GGDEF domain AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 SUPERFAMILY SSF141868 703 946 2.48E-64 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 522 683 1.9E-36 T 11-10-2018 IPR000160 GGDEF domain AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 SUPERFAMILY SSF55785 415 522 1.12E-15 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 Pfam PF13426 PAS domain 421 514 7.0E-10 T 11-10-2018 IPR000014 PAS domain AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 Pfam PF07696 7TMR-DISM extracellular 2 76 173 4.2E-5 T 11-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 SMART SM00267 515 685 7.2E-44 T 11-10-2018 IPR000160 GGDEF domain AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 SMART SM00086 475 515 0.0031 T 11-10-2018 IPR001610 PAC motif AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 Gene3D G3DSA:3.30.70.270 517 685 1.4E-46 T 11-10-2018 AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 SUPERFAMILY SSF55073 531 687 7.85E-42 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_00765 4710361722a487c5637225cf6bcdfe13 948 Gene3D G3DSA:3.30.450.20 403 516 7.2E-19 T 11-10-2018 AVL55_04945 71aed73200ebf2ff31662841183191d4 334 SUPERFAMILY SSF51735 1 261 5.23E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_04945 71aed73200ebf2ff31662841183191d4 334 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 4 329 3.0E-164 T 11-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 AVL55_04945 71aed73200ebf2ff31662841183191d4 334 Pfam PF02719 Polysaccharide biosynthesis protein 9 281 3.5E-102 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AVL55_04945 71aed73200ebf2ff31662841183191d4 334 Gene3D G3DSA:3.90.25.30 169 317 7.4E-133 T 11-10-2018 AVL55_04945 71aed73200ebf2ff31662841183191d4 334 Gene3D G3DSA:3.40.50.720 6 313 7.4E-133 T 11-10-2018 AVL55_15930 d83102f9a6f2d4c3ee1fa52092d77ecb 260 SUPERFAMILY SSF63848 155 259 4.05E-32 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 AVL55_15930 d83102f9a6f2d4c3ee1fa52092d77ecb 260 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 156 257 8.8E-33 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AVL55_15930 d83102f9a6f2d4c3ee1fa52092d77ecb 260 Gene3D G3DSA:2.160.20.70 152 260 3.8E-33 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AVL55_15930 d83102f9a6f2d4c3ee1fa52092d77ecb 260 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 260 25.678 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AVL55_15930 d83102f9a6f2d4c3ee1fa52092d77ecb 260 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 259 7.4E-59 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AVL55_15930 d83102f9a6f2d4c3ee1fa52092d77ecb 260 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 3 101 1.3E-11 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AVL55_15930 d83102f9a6f2d4c3ee1fa52092d77ecb 260 Gene3D G3DSA:3.30.750.120 1 113 4.2E-18 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily AVL55_12145 b5e70af0cc8c969d9f582eb668143c76 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 7.1E-30 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AVL55_12145 b5e70af0cc8c969d9f582eb668143c76 283 SUPERFAMILY SSF53697 91 277 5.26E-41 T 11-10-2018 AVL55_12145 b5e70af0cc8c969d9f582eb668143c76 283 Gene3D G3DSA:1.10.10.10 1 79 1.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_12145 b5e70af0cc8c969d9f582eb668143c76 283 Gene3D G3DSA:3.40.50.10490 93 274 9.4E-41 T 11-10-2018 AVL55_12145 b5e70af0cc8c969d9f582eb668143c76 283 SUPERFAMILY SSF46689 1 80 1.15E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_12145 b5e70af0cc8c969d9f582eb668143c76 283 Pfam PF01380 SIS domain 124 252 3.1E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AVL55_13480 1c5249f10fc38eea7f305948bba520ad 161 Gene3D G3DSA:3.10.50.40 3 152 9.1E-53 T 11-10-2018 AVL55_13480 1c5249f10fc38eea7f305948bba520ad 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 85 1.6E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AVL55_13480 1c5249f10fc38eea7f305948bba520ad 161 SUPERFAMILY SSF54534 3 139 6.29E-35 T 11-10-2018 AVL55_13480 1c5249f10fc38eea7f305948bba520ad 161 Gene3D G3DSA:2.40.10.330 71 120 9.1E-53 T 11-10-2018 AVL55_17880 708b562a24eb7def7e427d930bd17a29 294 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 294 23.959 T 11-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AVL55_17880 708b562a24eb7def7e427d930bd17a29 294 PIRSF PIRSF035875 5 294 5.2E-61 T 11-10-2018 IPR017039 Virulence factor BrkB AVL55_17880 708b562a24eb7def7e427d930bd17a29 294 Pfam PF03631 Virulence factor BrkB 30 276 1.1E-55 T 11-10-2018 IPR017039 Virulence factor BrkB AVL55_17880 708b562a24eb7def7e427d930bd17a29 294 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 277 1.5E-85 T 11-10-2018 IPR017039 Virulence factor BrkB AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 SMART SM00898 2 115 4.9E-52 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 4.9E-93 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 SUPERFAMILY SSF57716 217 268 8.76E-17 T 11-10-2018 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 Gene3D G3DSA:1.10.8.50 131 269 1.8E-47 T 11-10-2018 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 SUPERFAMILY SSF46946 130 221 4.97E-29 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 SMART SM01232 129 221 2.3E-45 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 SUPERFAMILY SSF81624 2 138 2.49E-39 T 11-10-2018 IPR035937 MutM-like, N-terminal AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.9E-32 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 9.1E-11 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 3.5E-25 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 Gene3D G3DSA:3.20.190.10 2 126 7.8E-40 T 11-10-2018 IPR035937 MutM-like, N-terminal AVL55_00285 819100a209e68e3a0100f451048b6dbe 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.73 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AVL55_15375 cb69ff20400e399c841644a4f6a268bf 280 SUPERFAMILY SSF82689 178 276 3.79E-34 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AVL55_15375 cb69ff20400e399c841644a4f6a268bf 280 Pfam PF00924 Mechanosensitive ion channel 69 265 2.5E-55 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_15375 cb69ff20400e399c841644a4f6a268bf 280 SUPERFAMILY SSF82861 25 109 8.63E-18 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AVL55_15375 cb69ff20400e399c841644a4f6a268bf 280 Gene3D G3DSA:3.30.70.100 177 270 3.4E-28 T 11-10-2018 AVL55_15375 cb69ff20400e399c841644a4f6a268bf 280 SUPERFAMILY SSF50182 110 176 7.19E-17 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_15375 cb69ff20400e399c841644a4f6a268bf 280 Gene3D G3DSA:2.30.30.60 126 175 1.7E-20 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_00475 2ba847918fafa05f6361a015859fc3de 307 Gene3D G3DSA:3.40.190.10 94 296 6.0E-44 T 11-10-2018 AVL55_00475 2ba847918fafa05f6361a015859fc3de 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 8.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_00475 2ba847918fafa05f6361a015859fc3de 307 Gene3D G3DSA:3.40.190.10 175 271 6.0E-44 T 11-10-2018 AVL55_00475 2ba847918fafa05f6361a015859fc3de 307 Gene3D G3DSA:1.10.10.10 2 92 5.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_00475 2ba847918fafa05f6361a015859fc3de 307 SUPERFAMILY SSF46785 9 90 1.9E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_00475 2ba847918fafa05f6361a015859fc3de 307 SUPERFAMILY SSF53850 94 297 4.89E-30 T 11-10-2018 AVL55_00475 2ba847918fafa05f6361a015859fc3de 307 Pfam PF03466 LysR substrate binding domain 100 297 1.3E-13 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_02880 0cadd4da6109cc0f8955f749ddfce48b 341 Pfam PF13353 4Fe-4S single cluster domain 111 182 5.7E-7 T 11-10-2018 AVL55_02880 0cadd4da6109cc0f8955f749ddfce48b 341 Pfam PF04055 Radical SAM superfamily 118 263 1.0E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_02880 0cadd4da6109cc0f8955f749ddfce48b 341 PIRSF PIRSF004911 2 340 4.6E-112 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AVL55_02880 0cadd4da6109cc0f8955f749ddfce48b 341 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.3E-145 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like AVL55_02880 0cadd4da6109cc0f8955f749ddfce48b 341 SUPERFAMILY SSF102114 104 327 2.22E-28 T 11-10-2018 AVL55_02880 0cadd4da6109cc0f8955f749ddfce48b 341 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 3.1E-111 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AVL55_02880 0cadd4da6109cc0f8955f749ddfce48b 341 Gene3D G3DSA:3.20.20.70 51 334 1.2E-87 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.4E-257 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 Gene3D G3DSA:3.30.260.10 136 410 7.8E-242 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AVL55_19145 7a631919af5b57183fb284a5f8623989 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 4.3E-98 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 SUPERFAMILY SSF52029 185 376 8.02E-86 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AVL55_19145 7a631919af5b57183fb284a5f8623989 545 Gene3D G3DSA:1.10.560.10 8 521 7.8E-242 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AVL55_19145 7a631919af5b57183fb284a5f8623989 545 Gene3D G3DSA:3.50.7.10 192 372 7.8E-242 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AVL55_19145 7a631919af5b57183fb284a5f8623989 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.852 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AVL55_19145 7a631919af5b57183fb284a5f8623989 545 SUPERFAMILY SSF54849 138 203 8.01E-24 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AVL55_19145 7a631919af5b57183fb284a5f8623989 545 SUPERFAMILY SSF48592 7 521 1.22E-78 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AVL55_08740 85e61f2fd855b07c7bced42f1f1e6c62 126 SUPERFAMILY SSF110857 16 124 2.75E-15 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AVL55_08740 85e61f2fd855b07c7bced42f1f1e6c62 126 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 17 124 1.5E-13 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AVL55_08740 85e61f2fd855b07c7bced42f1f1e6c62 126 Gene3D G3DSA:3.10.490.10 2 124 1.7E-17 T 11-10-2018 AVL55_06760 e34fb0c77b9b1a1a1d071e3111071ccc 690 SMART SM00052 430 675 1.0E-91 T 11-10-2018 IPR001633 EAL domain AVL55_06760 e34fb0c77b9b1a1a1d071e3111071ccc 690 SUPERFAMILY SSF55073 264 422 3.14E-46 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_06760 e34fb0c77b9b1a1a1d071e3111071ccc 690 Pfam PF00563 EAL domain 438 670 2.0E-66 T 11-10-2018 IPR001633 EAL domain AVL55_06760 e34fb0c77b9b1a1a1d071e3111071ccc 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 415 1.9E-45 T 11-10-2018 IPR000160 GGDEF domain AVL55_06760 e34fb0c77b9b1a1a1d071e3111071ccc 690 Gene3D G3DSA:3.20.20.450 433 680 5.3E-85 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_06760 e34fb0c77b9b1a1a1d071e3111071ccc 690 SMART SM00267 248 420 3.4E-57 T 11-10-2018 IPR000160 GGDEF domain AVL55_06760 e34fb0c77b9b1a1a1d071e3111071ccc 690 SUPERFAMILY SSF141868 436 677 8.11E-81 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_06760 e34fb0c77b9b1a1a1d071e3111071ccc 690 Gene3D G3DSA:3.30.70.270 254 432 1.6E-54 T 11-10-2018 AVL55_06760 e34fb0c77b9b1a1a1d071e3111071ccc 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 418 1.8E-38 T 11-10-2018 IPR000160 GGDEF domain AVL55_15610 a18d8fba3b559995393e4c15769520fb 309 SUPERFAMILY SSF53686 11 307 1.44E-44 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AVL55_15610 a18d8fba3b559995393e4c15769520fb 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 303 5.0E-19 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AVL55_15610 a18d8fba3b559995393e4c15769520fb 309 PIRSF PIRSF006278 3 309 1.2E-55 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AVL55_15610 a18d8fba3b559995393e4c15769520fb 309 Gene3D G3DSA:3.40.50.1100 14 306 6.0E-52 T 11-10-2018 AVL55_15610 a18d8fba3b559995393e4c15769520fb 309 Gene3D G3DSA:3.40.50.1100 47 147 6.0E-52 T 11-10-2018 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 Gene3D G3DSA:3.30.565.10 254 423 1.7E-53 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 Pfam PF00072 Response regulator receiver domain 439 548 6.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 SUPERFAMILY SSF47384 175 256 1.71E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 SMART SM00448 437 548 7.6E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 SMART SM00388 190 255 8.0E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 Gene3D G3DSA:1.10.287.130 157 253 3.9E-24 T 11-10-2018 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 SMART SM00387 302 418 5.7E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 Gene3D G3DSA:3.40.50.12740 436 565 1.1E-36 T 11-10-2018 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 Pfam PF00512 His Kinase A (phospho-acceptor) domain 191 255 1.1E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 3.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 3.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 3.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 3.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 417 3.7E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 SUPERFAMILY SSF52172 435 554 5.55E-37 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_03270 58df2d28d9e651cbfe74c5de8a17ef87 570 SUPERFAMILY SSF55874 244 417 3.01E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_00815 85cde8203ea9f886f37ec2bb9385dca9 502 Gene3D G3DSA:3.30.70.270 332 501 3.0E-45 T 11-10-2018 AVL55_00815 85cde8203ea9f886f37ec2bb9385dca9 502 SMART SM00267 335 502 3.9E-38 T 11-10-2018 IPR000160 GGDEF domain AVL55_00815 85cde8203ea9f886f37ec2bb9385dca9 502 SUPERFAMILY SSF55073 351 500 8.63E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_00815 85cde8203ea9f886f37ec2bb9385dca9 502 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 500 1.4E-38 T 11-10-2018 IPR000160 GGDEF domain AVL55_00815 85cde8203ea9f886f37ec2bb9385dca9 502 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 497 3.9E-36 T 11-10-2018 IPR000160 GGDEF domain AVL55_05735 d71576988aa5c03c83de25cb72483a60 809 Pfam PF02384 N-6 DNA Methylase 177 483 1.7E-59 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AVL55_05735 d71576988aa5c03c83de25cb72483a60 809 SUPERFAMILY SSF53335 7 538 1.38E-113 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_05735 d71576988aa5c03c83de25cb72483a60 809 Pfam PF12161 HsdM N-terminal domain 10 149 3.6E-21 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AVL55_05735 d71576988aa5c03c83de25cb72483a60 809 Gene3D G3DSA:3.40.50.150 176 498 9.9E-93 T 11-10-2018 AVL55_05735 d71576988aa5c03c83de25cb72483a60 809 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AVL55_05735 d71576988aa5c03c83de25cb72483a60 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 227 241 5.8E-13 T 11-10-2018 AVL55_05735 d71576988aa5c03c83de25cb72483a60 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 197 213 5.8E-13 T 11-10-2018 AVL55_05735 d71576988aa5c03c83de25cb72483a60 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 301 313 5.8E-13 T 11-10-2018 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 SUPERFAMILY SSF53697 4 545 1.61E-208 T 11-10-2018 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 Gene3D G3DSA:1.10.1390.10 505 546 6.9E-17 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 40.203 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 Pfam PF00342 Phosphoglucose isomerase 49 539 4.7E-208 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 Gene3D G3DSA:3.40.50.10490 10 504 1.1E-220 T 11-10-2018 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 Gene3D G3DSA:3.40.50.10490 95 289 1.1E-220 T 11-10-2018 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 9.4E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 9.4E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 9.4E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 9.4E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 9.4E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_15510 36e47f09b2b0d1473a4174ce6ddda846 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 9.4E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_01385 16237de6d60f1c763436204d78b5d85c 144 Gene3D G3DSA:1.10.1660.10 1 119 6.9E-26 T 11-10-2018 AVL55_01385 16237de6d60f1c763436204d78b5d85c 144 Pfam PF00376 MerR family regulatory protein 3 38 1.1E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_01385 16237de6d60f1c763436204d78b5d85c 144 Pfam PF09278 MerR, DNA binding 44 103 6.8E-15 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AVL55_01385 16237de6d60f1c763436204d78b5d85c 144 SUPERFAMILY SSF46955 1 105 2.2E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_01385 16237de6d60f1c763436204d78b5d85c 144 SMART SM00422 1 69 6.0E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.2E-20 T 11-10-2018 AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 1.2E-20 T 11-10-2018 AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-20 T 11-10-2018 AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 1.2E-20 T 11-10-2018 AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 SUPERFAMILY SSF51905 3 382 4.98E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 Pfam PF01494 FAD binding domain 4 345 7.0E-32 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 389 5.9E-132 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 Gene3D G3DSA:3.50.50.60 5 337 1.4E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 293 306 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AVL55_15015 3c692b99d66e4caa9112252d0633e915 390 Gene3D G3DSA:3.30.9.50 79 268 1.4E-115 T 11-10-2018 AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 Gene3D G3DSA:2.40.30.110 277 359 1.5E-32 T 11-10-2018 AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 Gene3D G3DSA:4.10.1250.10 232 275 1.4E-27 T 11-10-2018 AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 PIRSF PIRSF006487 1 358 3.1E-87 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 SUPERFAMILY SSF101790 275 356 4.25E-25 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 SUPERFAMILY SSF103025 4 277 5.34E-93 T 11-10-2018 AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 Gene3D G3DSA:3.30.70.1400 51 138 2.6E-89 T 11-10-2018 AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 354 44.964 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 Gene3D G3DSA:3.30.1360.120 7 231 2.6E-89 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 354 4.3E-146 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 1.2E-89 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AVL55_14985 5fb0c3dc12114ccfc056ce9fc1fa188e 359 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 349 2.1E-20 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AVL55_06430 5105092f12eb81baca5cef11d50befe5 193 PIRSF PIRSF005784 6 191 1.0E-88 T 11-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AVL55_06430 5105092f12eb81baca5cef11d50befe5 193 Gene3D G3DSA:3.30.70.20 86 181 5.3E-22 T 11-10-2018 AVL55_06430 5105092f12eb81baca5cef11d50befe5 193 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AVL55_06430 5105092f12eb81baca5cef11d50befe5 193 SUPERFAMILY SSF54862 41 177 8.13E-31 T 11-10-2018 AVL55_06430 5105092f12eb81baca5cef11d50befe5 193 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 7 170 25.76 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AVL55_06430 5105092f12eb81baca5cef11d50befe5 193 Pfam PF04060 Putative Fe-S cluster 47 78 1.7E-14 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 AVL55_06430 5105092f12eb81baca5cef11d50befe5 193 Pfam PF14697 4Fe-4S dicluster domain 111 165 1.9E-18 T 11-10-2018 AVL55_06430 5105092f12eb81baca5cef11d50befe5 193 Gene3D G3DSA:1.10.15.40 41 85 1.4E-7 T 11-10-2018 AVL55_06430 5105092f12eb81baca5cef11d50befe5 193 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 183 2.8E-87 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AVL55_06975 54dfdbb8eb9cd9552206191fb84b4663 371 SUPERFAMILY SSF55073 205 361 2.98E-46 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_06975 54dfdbb8eb9cd9552206191fb84b4663 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 197 357 2.9E-45 T 11-10-2018 IPR000160 GGDEF domain AVL55_06975 54dfdbb8eb9cd9552206191fb84b4663 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 355 4.5E-42 T 11-10-2018 IPR000160 GGDEF domain AVL55_06975 54dfdbb8eb9cd9552206191fb84b4663 371 Gene3D G3DSA:3.30.70.270 193 362 2.8E-54 T 11-10-2018 AVL55_06975 54dfdbb8eb9cd9552206191fb84b4663 371 SMART SM00267 189 360 1.5E-55 T 11-10-2018 IPR000160 GGDEF domain AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 SUPERFAMILY SSF50156 384 452 1.06E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 Gene3D G3DSA:2.40.10.120 37 258 9.6E-88 T 11-10-2018 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 PRINTS PR00834 HtrA/DegQ protease family signature 304 316 1.2E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 1.2E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 PRINTS PR00834 HtrA/DegQ protease family signature 121 141 1.2E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 PRINTS PR00834 HtrA/DegQ protease family signature 196 213 1.2E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 PRINTS PR00834 HtrA/DegQ protease family signature 161 185 1.2E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 1.2E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 Pfam PF13365 Trypsin-like peptidase domain 90 225 7.9E-34 T 11-10-2018 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 SUPERFAMILY SSF50494 38 255 5.4E-68 T 11-10-2018 IPR009003 Peptidase S1, PA clan AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 Pfam PF13180 PDZ domain 286 355 5.6E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 Gene3D G3DSA:2.30.42.10 362 453 3.3E-25 T 11-10-2018 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 SMART SM00228 371 444 2.3E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 SMART SM00228 264 346 4.5E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 Gene3D G3DSA:2.30.42.10 259 361 5.3E-26 T 11-10-2018 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 450 1.5E-155 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 SUPERFAMILY SSF50156 222 347 1.17E-24 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AVL55_03625 f178fddbe6cebb7b143fb38dca28c4c7 453 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 440 9.0E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_06365 7297b4191b91484ecf8bf5289b48f9fa 201 SUPERFAMILY SSF52833 3 195 3.48E-67 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_06365 7297b4191b91484ecf8bf5289b48f9fa 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 195 1.5E-9 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_06365 7297b4191b91484ecf8bf5289b48f9fa 201 PIRSF PIRSF000239 1 200 1.6E-57 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_06365 7297b4191b91484ecf8bf5289b48f9fa 201 Pfam PF00578 AhpC/TSA family 5 140 1.0E-33 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_06365 7297b4191b91484ecf8bf5289b48f9fa 201 Gene3D G3DSA:3.40.30.10 1 198 3.0E-73 T 11-10-2018 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 Gene3D G3DSA:3.40.50.1820 21 305 2.4E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 PRINTS PR00412 Epoxide hydrolase signature 123 136 2.4E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 PRINTS PR00412 Epoxide hydrolase signature 249 265 2.4E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 PRINTS PR00412 Epoxide hydrolase signature 283 305 2.4E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 PRINTS PR00412 Epoxide hydrolase signature 78 93 2.4E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 PRINTS PR00412 Epoxide hydrolase signature 137 150 2.4E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 Pfam PF00561 alpha/beta hydrolase fold 53 290 1.9E-26 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 5.1E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 251 265 5.1E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 137 150 5.1E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 93 5.1E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_18820 02faeddde4eb0220d9d00b8dc56d96fc 309 SUPERFAMILY SSF53474 33 303 2.37E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_18425 4053470d755719f06d95ff4cb0e53f3a 390 Pfam PF13412 Winged helix-turn-helix DNA-binding 23 68 5.0E-9 T 11-10-2018 AVL55_18425 4053470d755719f06d95ff4cb0e53f3a 390 Gene3D G3DSA:3.30.420.40 88 202 3.5E-5 T 11-10-2018 AVL55_18425 4053470d755719f06d95ff4cb0e53f3a 390 Gene3D G3DSA:1.10.10.10 20 87 1.1E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_18425 4053470d755719f06d95ff4cb0e53f3a 390 SUPERFAMILY SSF53067 94 387 3.77E-29 T 11-10-2018 AVL55_18425 4053470d755719f06d95ff4cb0e53f3a 390 Gene3D G3DSA:3.30.420.40 203 389 1.2E-24 T 11-10-2018 AVL55_18425 4053470d755719f06d95ff4cb0e53f3a 390 SUPERFAMILY SSF46785 21 87 3.91E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_18425 4053470d755719f06d95ff4cb0e53f3a 390 Pfam PF00480 ROK family 94 255 8.2E-19 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 SUPERFAMILY SSF56235 13 429 2.39E-148 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 SUPERFAMILY SSF69336 1215 1466 6.15E-85 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 Pfam PF00310 Glutamine amidotransferases class-II 13 426 1.0E-173 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 Gene3D G3DSA:2.160.20.60 1211 1480 2.0E-97 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 Pfam PF01493 GXGXG motif 1237 1423 3.4E-75 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 Pfam PF01645 Conserved region in glutamate synthase 794 1157 3.1E-151 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 Pfam PF04898 Glutamate synthase central domain 460 738 9.2E-102 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AVL55_15785 1985ccad285f8ee518fca8b113c21015 1488 SUPERFAMILY SSF51395 435 1194 3.66E-248 T 11-10-2018 AVL55_04460 eec75a6610e2fcb6ad87d1ea676442ec 398 Pfam PF12698 ABC-2 family transporter protein 16 387 4.2E-29 T 11-10-2018 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 SUPERFAMILY SSF48452 95 256 5.31E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 SUPERFAMILY SSF48452 338 451 3.63E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 Pfam PF13432 Tetratricopeptide repeat 410 441 0.0018 T 11-10-2018 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 SMART SM00028 372 405 18.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 SMART SM00028 158 191 0.26 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 SMART SM00028 124 157 55.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 SMART SM00028 406 439 240.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 SMART SM00028 226 259 21.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 SMART SM00028 338 371 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 Pfam PF14559 Tetratricopeptide repeat 348 394 2.5E-7 T 11-10-2018 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 Gene3D G3DSA:1.25.40.10 48 285 1.6E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 Gene3D G3DSA:1.25.40.10 293 452 1.1E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_18095 62c08485f65fc19b4e76632e57b4d74f 457 Pfam PF13429 Tetratricopeptide repeat 154 249 2.3E-8 T 11-10-2018 AVL55_14230 13db3889cdae13c6e78abed709b2ba6b 251 SUPERFAMILY SSF48613 2 249 3.46E-72 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AVL55_14230 13db3889cdae13c6e78abed709b2ba6b 251 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 7 232 6.8E-106 T 11-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AVL55_14230 13db3889cdae13c6e78abed709b2ba6b 251 Gene3D G3DSA:1.20.910.10 2 251 5.9E-69 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AVL55_14230 13db3889cdae13c6e78abed709b2ba6b 251 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 251 124.3 T 11-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AVL55_14230 13db3889cdae13c6e78abed709b2ba6b 251 Pfam PF03070 TENA/THI-4/PQQC family 13 224 3.0E-56 T 11-10-2018 IPR004305 Thiaminase-2/PQQC AVL55_04100 c9514956f03a77320d043357a071b209 324 PRINTS PR00069 Aldo-keto reductase signature 118 136 1.7E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_04100 c9514956f03a77320d043357a071b209 324 PRINTS PR00069 Aldo-keto reductase signature 149 166 1.7E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AVL55_04100 c9514956f03a77320d043357a071b209 324 Pfam PF00248 Aldo/keto reductase family 18 313 1.3E-59 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AVL55_04100 c9514956f03a77320d043357a071b209 324 SUPERFAMILY SSF51430 15 315 9.95E-72 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_04100 c9514956f03a77320d043357a071b209 324 Gene3D G3DSA:3.20.20.100 3 324 8.4E-93 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_16415 d94dd37df0d3ae69bf61d8bf155d606d 698 SMART SM00900 74 169 3.0E-6 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AVL55_16415 d94dd37df0d3ae69bf61d8bf155d606d 698 SUPERFAMILY SSF54862 496 668 1.17E-8 T 11-10-2018 AVL55_16415 d94dd37df0d3ae69bf61d8bf155d606d 698 PIRSF PIRSF036354 1 698 3.7E-165 T 11-10-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 AVL55_16415 d94dd37df0d3ae69bf61d8bf155d606d 698 Pfam PF12801 4Fe-4S binding domain 482 528 7.4E-13 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AVL55_16415 d94dd37df0d3ae69bf61d8bf155d606d 698 Pfam PF12801 4Fe-4S binding domain 585 620 0.0015 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AVL55_10995 0ae08ebbfb52a9141db4706ace6c1b9d 389 SUPERFAMILY SSF48452 37 248 8.34E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_10995 0ae08ebbfb52a9141db4706ace6c1b9d 389 Gene3D G3DSA:1.25.40.10 21 348 9.2E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_10995 0ae08ebbfb52a9141db4706ace6c1b9d 389 SMART SM00028 35 68 480.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_10995 0ae08ebbfb52a9141db4706ace6c1b9d 389 SMART SM00028 216 249 64.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_10995 0ae08ebbfb52a9141db4706ace6c1b9d 389 SMART SM00028 69 102 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_10995 0ae08ebbfb52a9141db4706ace6c1b9d 389 SMART SM00028 107 140 230.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_10995 0ae08ebbfb52a9141db4706ace6c1b9d 389 SMART SM00028 182 215 220.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_10995 0ae08ebbfb52a9141db4706ace6c1b9d 389 SMART SM00028 282 315 86.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_10995 0ae08ebbfb52a9141db4706ace6c1b9d 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 34.531 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 Pfam PF04324 BFD-like [2Fe-2S] binding domain 905 953 1.1E-11 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 SUPERFAMILY SSF53706 13 610 2.75E-172 T 11-10-2018 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 Pfam PF00384 Molybdopterin oxidoreductase 84 496 1.3E-79 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 16 68 4.3E-14 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 Gene3D G3DSA:2.40.40.20 597 732 5.4E-34 T 11-10-2018 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 Gene3D G3DSA:1.10.10.1100 905 957 9.0E-13 T 11-10-2018 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 SUPERFAMILY SSF50692 581 728 1.27E-36 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 PIRSF PIRSF036643 1 753 2.0E-144 T 11-10-2018 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 Gene3D G3DSA:2.20.25.90 16 70 1.6E-12 T 11-10-2018 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 Gene3D G3DSA:3.40.228.10 148 349 7.5E-163 T 11-10-2018 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 SMART SM00926 13 70 1.3E-8 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 Gene3D G3DSA:3.40.50.740 83 552 7.5E-163 T 11-10-2018 AVL55_02965 c5a1edfa5e76f16c88649d0a1f293f1c 963 Pfam PF01568 Molydopterin dinucleotide binding domain 609 722 3.0E-24 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AVL55_19810 18a9ceef289700c2b14db17a98c0f920 802 SUPERFAMILY SSF52540 526 781 5.33E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_19810 18a9ceef289700c2b14db17a98c0f920 802 Gene3D G3DSA:3.40.50.300 603 793 8.3E-34 T 11-10-2018 AVL55_19810 18a9ceef289700c2b14db17a98c0f920 802 SUPERFAMILY SSF52540 326 581 8.58E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_19810 18a9ceef289700c2b14db17a98c0f920 802 Pfam PF04851 Type III restriction enzyme, res subunit 420 564 1.9E-19 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AVL55_19810 18a9ceef289700c2b14db17a98c0f920 802 Gene3D G3DSA:3.40.50.300 412 589 3.0E-38 T 11-10-2018 AVL55_19810 18a9ceef289700c2b14db17a98c0f920 802 SMART SM00487 418 594 2.4E-23 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_17960 54e6c6fd44f94702b6e8a4a74a592a1d 60 SUPERFAMILY SSF46955 3 51 8.55E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_17960 54e6c6fd44f94702b6e8a4a74a592a1d 60 Gene3D G3DSA:1.10.1660.10 2 59 3.4E-5 T 11-10-2018 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 Pfam PF01619 Proline dehydrogenase 192 482 4.2E-95 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 67 180 6.5E-45 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 Gene3D G3DSA:3.40.605.10 562 1007 1.3E-145 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 Gene3D G3DSA:3.40.309.10 784 976 1.3E-145 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 SUPERFAMILY SSF53720 559 1005 1.96E-127 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 519 1005 2.5E-197 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 SUPERFAMILY SSF53720 1034 1212 3.53E-12 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 SUPERFAMILY SSF81935 11 182 2.88E-60 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 809 820 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 SUPERFAMILY SSF51730 183 526 1.73E-114 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 PIRSF PIRSF000197 2 1261 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 Gene3D G3DSA:3.40.605.10 1014 1231 8.1E-10 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 Gene3D G3DSA:3.20.20.220 139 521 8.1E-136 T 11-10-2018 AVL55_02660 b5bcb12a38c5f7e71f138f4e095c6c8d 1265 Pfam PF00171 Aldehyde dehydrogenase family 563 1003 1.8E-119 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AVL55_04385 7a4e542ce86c5e77745d1d330db9e5fe 392 Gene3D G3DSA:3.30.460.10 1 121 2.3E-29 T 11-10-2018 AVL55_04385 7a4e542ce86c5e77745d1d330db9e5fe 392 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.5E-9 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AVL55_04385 7a4e542ce86c5e77745d1d330db9e5fe 392 SUPERFAMILY SSF81891 120 387 1.96E-43 T 11-10-2018 AVL55_04385 7a4e542ce86c5e77745d1d330db9e5fe 392 PIRSF PIRSF000813 1 392 4.0E-135 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AVL55_04385 7a4e542ce86c5e77745d1d330db9e5fe 392 SUPERFAMILY SSF81301 1 119 3.49E-30 T 11-10-2018 AVL55_04385 7a4e542ce86c5e77745d1d330db9e5fe 392 Hamap MF_01262 CCA-adding enzyme [cca]. 1 388 40.035 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AVL55_04385 7a4e542ce86c5e77745d1d330db9e5fe 392 Gene3D G3DSA:1.10.3090.10 122 392 6.4E-45 T 11-10-2018 AVL55_04385 7a4e542ce86c5e77745d1d330db9e5fe 392 Pfam PF01743 Poly A polymerase head domain 3 122 2.8E-19 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AVL55_10685 8903b53305ee308e2043e6f0476d1f4e 398 Gene3D G3DSA:1.10.443.10 177 384 3.5E-39 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_10685 8903b53305ee308e2043e6f0476d1f4e 398 Gene3D G3DSA:1.10.150.130 66 165 6.0E-11 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AVL55_10685 8903b53305ee308e2043e6f0476d1f4e 398 SUPERFAMILY SSF47823 77 152 6.67E-11 T 11-10-2018 AVL55_10685 8903b53305ee308e2043e6f0476d1f4e 398 Pfam PF00589 Phage integrase family 183 382 3.0E-19 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_10685 8903b53305ee308e2043e6f0476d1f4e 398 SUPERFAMILY SSF56349 176 390 3.53E-36 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_02375 adbdd17197877bab2efbd2edd50d33c4 265 SUPERFAMILY SSF53850 24 243 8.64E-37 T 11-10-2018 AVL55_02375 adbdd17197877bab2efbd2edd50d33c4 265 Gene3D G3DSA:3.40.190.10 31 243 5.1E-26 T 11-10-2018 AVL55_02375 adbdd17197877bab2efbd2edd50d33c4 265 Gene3D G3DSA:3.40.190.10 107 207 5.1E-26 T 11-10-2018 AVL55_02375 adbdd17197877bab2efbd2edd50d33c4 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 244 1.5E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_02375 adbdd17197877bab2efbd2edd50d33c4 265 SMART SM00062 25 256 0.0013 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_18870 ed5d4e28d71e4de66398f0b0827f094c 294 SUPERFAMILY SSF46785 6 90 4.09E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_18870 ed5d4e28d71e4de66398f0b0827f094c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_18870 ed5d4e28d71e4de66398f0b0827f094c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_18870 ed5d4e28d71e4de66398f0b0827f094c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_18870 ed5d4e28d71e4de66398f0b0827f094c 294 Gene3D G3DSA:1.10.10.10 5 92 9.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_18870 ed5d4e28d71e4de66398f0b0827f094c 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.8E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_18870 ed5d4e28d71e4de66398f0b0827f094c 294 Pfam PF03466 LysR substrate binding domain 90 291 4.9E-34 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_18870 ed5d4e28d71e4de66398f0b0827f094c 294 Gene3D G3DSA:3.40.190.290 93 290 1.2E-35 T 11-10-2018 AVL55_18870 ed5d4e28d71e4de66398f0b0827f094c 294 SUPERFAMILY SSF53850 90 293 6.15E-34 T 11-10-2018 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 Gene3D G3DSA:1.20.1080.10 5 260 1.9E-98 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 2.6E-67 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 ProSitePatterns PS00221 MIP family signature. 68 76 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 PRINTS PR00783 Major intrinsic protein family signature 50 74 1.7E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 PRINTS PR00783 Major intrinsic protein family signature 87 106 1.7E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 PRINTS PR00783 Major intrinsic protein family signature 235 255 1.7E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 PRINTS PR00783 Major intrinsic protein family signature 153 171 1.7E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 PRINTS PR00783 Major intrinsic protein family signature 11 30 1.7E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 PRINTS PR00783 Major intrinsic protein family signature 186 208 1.7E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 Pfam PF00230 Major intrinsic protein 6 252 1.2E-63 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AVL55_14330 adbadea3ba856ba265860b877832a6c7 289 SUPERFAMILY SSF81338 9 257 6.93E-75 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AVL55_13630 d61468c71289de98edf9f5ec7d7f0a13 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.9E-34 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_13630 d61468c71289de98edf9f5ec7d7f0a13 90 SMART SM00411 1 90 2.5E-43 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_13630 d61468c71289de98edf9f5ec7d7f0a13 90 SUPERFAMILY SSF47729 1 90 2.06E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AVL55_13630 d61468c71289de98edf9f5ec7d7f0a13 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AVL55_13630 d61468c71289de98edf9f5ec7d7f0a13 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.2E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_13630 d61468c71289de98edf9f5ec7d7f0a13 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.2E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_13630 d61468c71289de98edf9f5ec7d7f0a13 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.2E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_13630 d61468c71289de98edf9f5ec7d7f0a13 90 Gene3D G3DSA:4.10.520.10 1 90 4.2E-36 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 Gene3D G3DSA:3.40.50.300 197 368 3.3E-38 T 11-10-2018 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 Gene3D G3DSA:3.40.50.11060 17 138 4.5E-39 T 11-10-2018 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 360 1.6E-156 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 4.6E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.8E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 SUPERFAMILY SSF54980 365 421 1.44E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.5E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.5E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.5E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 PIRSF PIRSF006809 3 421 2.6E-149 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.189 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 SUPERFAMILY SSF52540 197 372 3.56E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18505 1af5ec3d55bb378077b8974a8158f136 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.3E-31 T 11-10-2018 IPR025121 GTPase HflX, N-terminal AVL55_12265 12cd44230097d692534d6621c062a3d8 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 336 9.3E-62 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AVL55_12265 12cd44230097d692534d6621c062a3d8 368 SUPERFAMILY SSF51395 1 351 1.47E-107 T 11-10-2018 AVL55_12265 12cd44230097d692534d6621c062a3d8 368 Gene3D G3DSA:3.20.20.70 1 363 5.7E-122 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.2E-10 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.2E-10 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 Gene3D G3DSA:3.30.750.70 69 131 2.9E-8 T 11-10-2018 AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 Gene3D G3DSA:1.10.10.10 1 55 1.3E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 SUPERFAMILY SSF46785 3 73 2.39E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 Pfam PF00455 DeoR C terminal sensor domain 74 232 5.0E-49 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 SMART SM00420 6 58 7.6E-19 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 SUPERFAMILY SSF100950 73 233 3.84E-26 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 SMART SM01134 72 233 9.2E-64 T 11-10-2018 AVL55_01040 4f713822c60f35e315ffea5f196717f7 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.0E-18 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AVL55_01940 b6c67a7893a76d1be3ebcc76f2915911 355 SUPERFAMILY SSF53067 185 346 9.15E-12 T 11-10-2018 AVL55_01940 b6c67a7893a76d1be3ebcc76f2915911 355 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 350 4.1E-74 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AVL55_01940 b6c67a7893a76d1be3ebcc76f2915911 355 SUPERFAMILY SSF53067 12 178 2.45E-10 T 11-10-2018 AVL55_01940 b6c67a7893a76d1be3ebcc76f2915911 355 SMART SM00842 12 179 0.008 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AVL55_01940 b6c67a7893a76d1be3ebcc76f2915911 355 Gene3D G3DSA:3.30.1490.300 88 147 3.5E-69 T 11-10-2018 AVL55_01940 b6c67a7893a76d1be3ebcc76f2915911 355 Gene3D G3DSA:3.30.420.40 13 348 3.5E-69 T 11-10-2018 AVL55_01940 b6c67a7893a76d1be3ebcc76f2915911 355 Pfam PF11104 Type IV pilus assembly protein PilM; 14 350 2.5E-103 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AVL55_01940 b6c67a7893a76d1be3ebcc76f2915911 355 Gene3D G3DSA:3.30.420.40 187 314 3.5E-69 T 11-10-2018 AVL55_01940 b6c67a7893a76d1be3ebcc76f2915911 355 PIRSF PIRSF019169 1 351 2.8E-96 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AVL55_04915 7d5dc67fd65d6a7c56b59799a19ab0c1 281 PRINTS PR00207 Flagellin signature 76 95 3.4E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_04915 7d5dc67fd65d6a7c56b59799a19ab0c1 281 PRINTS PR00207 Flagellin signature 111 134 3.4E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_04915 7d5dc67fd65d6a7c56b59799a19ab0c1 281 PRINTS PR00207 Flagellin signature 37 54 3.4E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_04915 7d5dc67fd65d6a7c56b59799a19ab0c1 281 Gene3D G3DSA:1.20.1330.10 189 233 1.7E-16 T 11-10-2018 AVL55_04915 7d5dc67fd65d6a7c56b59799a19ab0c1 281 SUPERFAMILY SSF64518 1 280 1.06E-88 T 11-10-2018 AVL55_04915 7d5dc67fd65d6a7c56b59799a19ab0c1 281 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.4E-38 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_04915 7d5dc67fd65d6a7c56b59799a19ab0c1 281 Gene3D G3DSA:1.10.8.410 234 280 9.2E-23 T 11-10-2018 AVL55_04915 7d5dc67fd65d6a7c56b59799a19ab0c1 281 Pfam PF00700 Bacterial flagellin C-terminal helical region 196 280 4.2E-27 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_04915 7d5dc67fd65d6a7c56b59799a19ab0c1 281 Gene3D G3DSA:1.20.1330.10 44 164 1.4E-51 T 11-10-2018 AVL55_13395 7f7c4a917fdf9b5e2de12b71948130ef 327 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 111 324 1.3E-78 T 11-10-2018 AVL55_13395 7f7c4a917fdf9b5e2de12b71948130ef 327 Gene3D G3DSA:3.40.50.1000 33 327 4.4E-73 T 11-10-2018 IPR023214 HAD superfamily AVL55_13395 7f7c4a917fdf9b5e2de12b71948130ef 327 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 122 292 2.8E-27 T 11-10-2018 AVL55_13395 7f7c4a917fdf9b5e2de12b71948130ef 327 Pfam PF12710 haloacid dehalogenase-like hydrolase 124 290 7.1E-15 T 11-10-2018 AVL55_13395 7f7c4a917fdf9b5e2de12b71948130ef 327 SUPERFAMILY SSF56784 122 326 9.07E-47 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_00695 4b8599057f45ca9b75db62799206b010 200 Pfam PF01810 LysE type translocator 15 198 1.0E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 425 8.2E-137 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 ProSitePatterns PS00756 Protein secY signature 2. 169 186 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 5.4E-98 T 11-10-2018 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 5.4E-98 T 11-10-2018 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 176 199 5.4E-98 T 11-10-2018 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 5.4E-98 T 11-10-2018 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 5.4E-98 T 11-10-2018 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 150 175 5.4E-98 T 11-10-2018 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 5.4E-98 T 11-10-2018 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 5.4E-98 T 11-10-2018 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 5.4E-98 T 11-10-2018 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 SUPERFAMILY SSF103491 14 420 2.35E-133 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 PIRSF PIRSF004557 10 437 1.8E-127 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 429 29.603 T 11-10-2018 IPR026593 Protein translocase subunit SecY AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 Pfam PF00344 SecY translocase 74 413 1.3E-116 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_17515 0a1760514d8f88452848c96db4e9477e 439 Gene3D G3DSA:1.10.3370.10 11 425 4.6E-160 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 Gene3D G3DSA:2.60.40.1840 443 545 1.2E-15 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AVL55_10090 eb540ea286dbee978bdea837677aac55 869 Pfam PF01433 Peptidase family M1 domain 207 437 1.5E-61 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 Gene3D G3DSA:1.25.50.10 548 865 4.3E-101 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AVL55_10090 eb540ea286dbee978bdea837677aac55 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 10 864 0.0 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 550 865 3.0E-102 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AVL55_10090 eb540ea286dbee978bdea837677aac55 869 SUPERFAMILY SSF55486 203 449 1.83E-74 T 11-10-2018 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 SUPERFAMILY SSF63737 4 192 7.19E-44 T 11-10-2018 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 4.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 Gene3D G3DSA:1.10.1740.60 194 278 1.4E-37 T 11-10-2018 AVL55_10090 eb540ea286dbee978bdea837677aac55 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 545 2.2E-16 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AVL55_10090 eb540ea286dbee978bdea837677aac55 869 Gene3D G3DSA:1.10.390.10 279 442 3.8E-64 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AVL55_10090 eb540ea286dbee978bdea837677aac55 869 Gene3D G3DSA:2.60.40.1730 13 193 4.8E-70 T 11-10-2018 AVL55_06900 2791715f7ba9172ef0b7294333694b70 147 SUPERFAMILY SSF143422 1 131 3.27E-44 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AVL55_06900 2791715f7ba9172ef0b7294333694b70 147 Pfam PF01797 Transposase IS200 like 12 130 7.0E-40 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AVL55_06900 2791715f7ba9172ef0b7294333694b70 147 SMART SM01321 11 130 8.6E-45 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AVL55_06900 2791715f7ba9172ef0b7294333694b70 147 Gene3D G3DSA:3.30.70.1290 2 138 1.1E-43 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AVL55_02705 bccf6ff9bca63292d7cc0d28fda3d0d5 225 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 225 129.169 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AVL55_02705 bccf6ff9bca63292d7cc0d28fda3d0d5 225 SUPERFAMILY SSF52980 6 223 1.13E-67 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AVL55_02705 bccf6ff9bca63292d7cc0d28fda3d0d5 225 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 9 221 4.6E-87 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AVL55_02705 bccf6ff9bca63292d7cc0d28fda3d0d5 225 SMART SM00927 56 154 1.1E-49 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AVL55_02705 bccf6ff9bca63292d7cc0d28fda3d0d5 225 Gene3D G3DSA:3.40.600.10 2 223 4.9E-50 T 11-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 AVL55_02705 bccf6ff9bca63292d7cc0d28fda3d0d5 225 Pfam PF02976 DNA mismatch repair enzyme MutH 56 154 2.8E-30 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AVL55_06620 c47db1b1a899dabec7850dca36456e13 431 SMART SM01091 342 420 9.2E-22 T 11-10-2018 IPR005170 Transporter-associated domain AVL55_06620 c47db1b1a899dabec7850dca36456e13 431 SUPERFAMILY SSF54631 193 329 1.25E-26 T 11-10-2018 AVL55_06620 c47db1b1a899dabec7850dca36456e13 431 Pfam PF00571 CBS domain 277 325 2.2E-6 T 11-10-2018 IPR000644 CBS domain AVL55_06620 c47db1b1a899dabec7850dca36456e13 431 Gene3D G3DSA:3.10.580.10 187 341 2.4E-44 T 11-10-2018 AVL55_06620 c47db1b1a899dabec7850dca36456e13 431 Pfam PF03471 Transporter associated domain 343 417 8.2E-17 T 11-10-2018 IPR005170 Transporter-associated domain AVL55_06620 c47db1b1a899dabec7850dca36456e13 431 SUPERFAMILY SSF56176 341 428 1.31E-20 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AVL55_06620 c47db1b1a899dabec7850dca36456e13 431 Gene3D G3DSA:3.30.465.10 342 418 9.0E-26 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AVL55_06620 c47db1b1a899dabec7850dca36456e13 431 Pfam PF01595 Domain of unknown function DUF21 15 180 2.7E-45 T 11-10-2018 IPR002550 CNNM, transmembrane domain AVL55_07995 623227965a26c35b1dae208e36ae6c78 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 304 7.3E-44 T 11-10-2018 IPR000160 GGDEF domain AVL55_07995 623227965a26c35b1dae208e36ae6c78 306 SMART SM00267 130 305 9.6E-47 T 11-10-2018 IPR000160 GGDEF domain AVL55_07995 623227965a26c35b1dae208e36ae6c78 306 Gene3D G3DSA:3.40.50.2300 11 131 1.3E-33 T 11-10-2018 AVL55_07995 623227965a26c35b1dae208e36ae6c78 306 Pfam PF00072 Response regulator receiver domain 14 125 8.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07995 623227965a26c35b1dae208e36ae6c78 306 SMART SM00448 12 124 4.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_07995 623227965a26c35b1dae208e36ae6c78 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 303 4.7E-43 T 11-10-2018 IPR000160 GGDEF domain AVL55_07995 623227965a26c35b1dae208e36ae6c78 306 Gene3D G3DSA:3.30.70.270 132 305 4.0E-48 T 11-10-2018 AVL55_07995 623227965a26c35b1dae208e36ae6c78 306 SUPERFAMILY SSF52172 12 141 1.04E-36 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_07995 623227965a26c35b1dae208e36ae6c78 306 SUPERFAMILY SSF55073 146 303 3.92E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_04215 8276fd4dae24f0afbdcf299f6ac490a5 96 SUPERFAMILY SSF103481 13 84 8.63E-13 T 11-10-2018 AVL55_04215 8276fd4dae24f0afbdcf299f6ac490a5 96 Pfam PF00892 EamA-like transporter family 13 78 2.1E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_07300 c04b69b7c6a71430cf05875e5042287a 287 Hamap MF_01805 Segregation and condensation protein A [scpA]. 52 283 21.012 T 11-10-2018 IPR003768 Segregation and condensation protein A AVL55_07300 c04b69b7c6a71430cf05875e5042287a 287 Pfam PF02616 Segregation and condensation protein ScpA 69 280 3.9E-29 T 11-10-2018 IPR003768 Segregation and condensation protein A AVL55_18140 1b13bc47bf39d092312594dab453f664 737 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 165 5.6E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_18140 1b13bc47bf39d092312594dab453f664 737 Gene3D G3DSA:2.40.170.20 180 737 2.9E-100 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_18140 1b13bc47bf39d092312594dab453f664 737 SUPERFAMILY SSF56935 25 737 1.43E-109 T 11-10-2018 AVL55_18140 1b13bc47bf39d092312594dab453f664 737 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 737 5.9E-83 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AVL55_18140 1b13bc47bf39d092312594dab453f664 737 Gene3D G3DSA:2.170.130.10 45 177 7.5E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_18140 1b13bc47bf39d092312594dab453f664 737 Pfam PF00593 TonB dependent receptor 291 736 9.6E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Gene3D G3DSA:1.10.287.130 138 211 6.9E-21 T 11-10-2018 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SMART SM00388 145 210 6.3E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Gene3D G3DSA:3.40.50.2300 1 137 3.0E-21 T 11-10-2018 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SUPERFAMILY SSF52172 405 525 4.27E-30 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Gene3D G3DSA:3.30.565.10 212 374 3.9E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SUPERFAMILY SSF52172 583 693 7.97E-27 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 329 2.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 373 2.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 354 2.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 315 2.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 372 1.4E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SMART SM00448 5 120 3.2E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SMART SM00448 404 520 1.3E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SMART SM00448 584 693 1.3E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Pfam PF00072 Response regulator receiver domain 7 109 2.3E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Pfam PF00072 Response regulator receiver domain 586 692 1.7E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Pfam PF00072 Response regulator receiver domain 406 518 1.0E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SUPERFAMILY SSF52172 5 137 3.7E-22 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SUPERFAMILY SSF55874 199 372 6.68E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SMART SM00387 257 376 3.6E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Gene3D G3DSA:3.40.50.2300 572 694 2.5E-25 T 11-10-2018 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Gene3D G3DSA:3.40.50.2300 404 525 3.4E-32 T 11-10-2018 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 209 3.9E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_12010 d85ab2a7d92a0dfeaccc6b47e3f70d8e 694 SUPERFAMILY SSF47384 136 210 3.14E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_04585 25f0ae15658b3fa64c3078e8870ab2ab 298 SUPERFAMILY SSF53448 3 250 4.22E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_04585 25f0ae15658b3fa64c3078e8870ab2ab 298 Pfam PF00535 Glycosyl transferase family 2 5 160 4.8E-8 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_04585 25f0ae15658b3fa64c3078e8870ab2ab 298 Gene3D G3DSA:3.90.550.10 2 205 6.9E-18 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 Gene3D G3DSA:2.40.180.10 2 488 1.2E-209 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 Pfam PF06628 Catalase-related immune-responsive 420 479 5.9E-18 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 PIRSF PIRSF038928 1 485 1.2E-211 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 SMART SM01060 8 395 4.9E-269 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 PRINTS PR00067 Catalase signature 321 347 5.7E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 PRINTS PR00067 Catalase signature 21 44 5.7E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 PRINTS PR00067 Catalase signature 124 142 5.7E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 PRINTS PR00067 Catalase signature 105 122 5.7E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 PRINTS PR00067 Catalase signature 84 102 5.7E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 PRINTS PR00067 Catalase signature 289 316 5.7E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 SUPERFAMILY SSF56634 4 480 2.22E-197 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_12280 78174d97d586f1946aab9afa9e1bbdc4 500 Pfam PF00199 Catalase 8 392 6.9E-181 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_00795 2ef890afe19bad301a12297e31035743 284 SUPERFAMILY SSF103481 163 266 1.44E-6 T 11-10-2018 AVL55_00795 2ef890afe19bad301a12297e31035743 284 SUPERFAMILY SSF103481 24 128 3.92E-13 T 11-10-2018 AVL55_00795 2ef890afe19bad301a12297e31035743 284 Pfam PF00892 EamA-like transporter family 1 126 4.6E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_00795 2ef890afe19bad301a12297e31035743 284 TIGRFAM TIGR00688 rarD: protein RarD 1 242 6.2E-75 T 11-10-2018 IPR004626 RarD protein GO:0005887 AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Gene3D G3DSA:2.60.40.10 614 731 1.4E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 SUPERFAMILY SSF55073 791 946 2.04E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Gene3D G3DSA:3.30.70.270 772 947 1.7E-53 T 11-10-2018 AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Pfam PF00990 Diguanylate cyclase, GGDEF domain 786 942 8.3E-42 T 11-10-2018 IPR000160 GGDEF domain AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 SUPERFAMILY SSF101898 32 296 5.23E-5 T 11-10-2018 AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Gene3D G3DSA:2.130.10.10 349 613 9.1E-35 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Gene3D G3DSA:2.130.10.10 118 346 3.2E-37 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Pfam PF07494 Two component regulator propeller 30 52 2.1E-4 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Pfam PF07494 Two component regulator propeller 230 253 0.012 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Pfam PF07494 Two component regulator propeller 272 295 0.0097 T 11-10-2018 IPR011110 Two component regulator propeller AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 783 945 1.5E-44 T 11-10-2018 IPR000160 GGDEF domain AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 SMART SM00267 775 946 1.2E-54 T 11-10-2018 IPR000160 GGDEF domain AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 SUPERFAMILY SSF63829 371 547 6.32E-7 T 11-10-2018 AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 SUPERFAMILY SSF63829 236 432 2.94E-9 T 11-10-2018 AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Gene3D G3DSA:2.130.10.10 12 106 2.1E-10 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_06200 ef912cdafae69f2af64f32e280f037d0 947 Pfam PF07495 Y_Y_Y domain 663 723 5.8E-12 T 11-10-2018 IPR011123 Two component regulator three Y AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 Pfam PF13721 SecD export protein N-terminal TM region 2 103 6.2E-32 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 613 47.534 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 SUPERFAMILY SSF82866 409 603 9.29E-45 T 11-10-2018 AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 600 7.3E-150 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 Gene3D G3DSA:1.20.1640.10 453 600 6.6E-8 T 11-10-2018 AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 344 593 5.6E-83 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 PRINTS PR00702 Acriflavin resistance protein family signature 577 600 1.7E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 1.7E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 PRINTS PR00702 Acriflavin resistance protein family signature 502 526 1.7E-7 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 Gene3D G3DSA:3.30.1360.200 277 430 1.2E-50 T 11-10-2018 AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 Pfam PF07549 SecD/SecF GG Motif 116 140 1.2E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 Pfam PF02355 Protein export membrane protein 432 601 1.1E-20 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AVL55_13865 36ae0a3547bf07ca66083a9331518f94 614 Gene3D G3DSA:3.30.70.3400 217 436 1.2E-50 T 11-10-2018 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 SUPERFAMILY SSF56014 429 563 6.15E-32 T 11-10-2018 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 SUPERFAMILY SSF55124 347 424 3.6E-22 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 Gene3D G3DSA:3.30.413.10 140 349 1.5E-83 T 11-10-2018 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 SUPERFAMILY SSF56014 148 345 1.31E-55 T 11-10-2018 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 PRINTS PR00397 Sirohaem Fe-binding site signature 431 449 6.0E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 PRINTS PR00397 Sirohaem Fe-binding site signature 479 497 6.0E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 559 0.14 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 354 418 8.5E-15 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 78 138 6.6E-14 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 Gene3D G3DSA:3.90.480.20 15 418 1.5E-83 T 11-10-2018 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 172 330 7.3E-46 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 18 560 4.1E-279 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 SUPERFAMILY SSF55124 13 144 4.42E-26 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 Gene3D G3DSA:3.30.413.10 428 569 1.1E-34 T 11-10-2018 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 9 572 58.791 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16750 6f1fc2b2eac9c546f759f9fbeba38250 573 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 479 495 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_18610 c4873dc857541356319ec72e064fab2a 216 Pfam PF03473 MOSC domain 50 162 6.6E-19 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AVL55_18610 c4873dc857541356319ec72e064fab2a 216 SUPERFAMILY SSF50800 6 212 5.02E-51 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AVL55_18610 c4873dc857541356319ec72e064fab2a 216 Gene3D G3DSA:2.40.33.20 2 216 6.9E-61 T 11-10-2018 AVL55_06295 053ad08febdf686b4d647f3081f6ef52 216 Pfam PF01713 Smr domain 133 207 2.0E-17 T 11-10-2018 IPR002625 Smr domain AVL55_06295 053ad08febdf686b4d647f3081f6ef52 216 SMART SM00463 130 208 4.7E-13 T 11-10-2018 IPR002625 Smr domain AVL55_06295 053ad08febdf686b4d647f3081f6ef52 216 SUPERFAMILY SSF160443 130 205 4.45E-10 T 11-10-2018 IPR036063 Smr domain superfamily AVL55_06295 053ad08febdf686b4d647f3081f6ef52 216 Gene3D G3DSA:3.30.1370.110 85 210 1.3E-26 T 11-10-2018 AVL55_03580 55cb72d03abef7c3dc14f6ac658a6627 318 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 2.9E-80 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AVL55_03580 55cb72d03abef7c3dc14f6ac658a6627 318 Gene3D G3DSA:1.20.58.1130 8 205 4.4E-84 T 11-10-2018 AVL55_03580 55cb72d03abef7c3dc14f6ac658a6627 318 Pfam PF01699 Sodium/calcium exchanger protein 173 316 2.4E-30 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AVL55_03580 55cb72d03abef7c3dc14f6ac658a6627 318 Pfam PF01699 Sodium/calcium exchanger protein 5 143 2.9E-28 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AVL55_03580 55cb72d03abef7c3dc14f6ac658a6627 318 Gene3D G3DSA:1.20.1420.30 35 310 4.4E-84 T 11-10-2018 AVL55_14060 dd7fa8fbfb0af88fa66847fbeddbb0a1 367 Pfam PF13439 Glycosyltransferase Family 4 12 167 4.0E-23 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AVL55_14060 dd7fa8fbfb0af88fa66847fbeddbb0a1 367 Gene3D G3DSA:3.40.50.2000 167 347 2.7E-71 T 11-10-2018 AVL55_14060 dd7fa8fbfb0af88fa66847fbeddbb0a1 367 Gene3D G3DSA:3.40.50.2000 12 356 2.7E-71 T 11-10-2018 AVL55_14060 dd7fa8fbfb0af88fa66847fbeddbb0a1 367 SUPERFAMILY SSF53756 3 363 1.15E-75 T 11-10-2018 AVL55_14060 dd7fa8fbfb0af88fa66847fbeddbb0a1 367 Pfam PF00534 Glycosyl transferases group 1 176 328 2.6E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_19460 b011cba8659b65873d163c282633e7a3 650 Gene3D G3DSA:3.40.50.300 3 274 2.1E-55 T 11-10-2018 AVL55_19460 b011cba8659b65873d163c282633e7a3 650 SUPERFAMILY SSF52540 2 242 1.8E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_19460 b011cba8659b65873d163c282633e7a3 650 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_19460 b011cba8659b65873d163c282633e7a3 650 Gene3D G3DSA:3.40.50.300 275 543 3.9E-52 T 11-10-2018 AVL55_19460 b011cba8659b65873d163c282633e7a3 650 Pfam PF00005 ABC transporter 328 459 5.9E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_19460 b011cba8659b65873d163c282633e7a3 650 Pfam PF12848 ABC transporter 218 291 4.6E-27 T 11-10-2018 IPR032781 ABC-transporter extension domain AVL55_19460 b011cba8659b65873d163c282633e7a3 650 SMART SM00382 337 503 5.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_19460 b011cba8659b65873d163c282633e7a3 650 SMART SM00382 26 223 7.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_19460 b011cba8659b65873d163c282633e7a3 650 Pfam PF00005 ABC transporter 18 178 1.1E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_19460 b011cba8659b65873d163c282633e7a3 650 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_19460 b011cba8659b65873d163c282633e7a3 650 SUPERFAMILY SSF52540 294 513 4.91E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02255 71d7a10b72bcc8bf2f2c85cb39670263 157 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AVL55_02255 71d7a10b72bcc8bf2f2c85cb39670263 157 Gene3D G3DSA:1.20.1260.10 1 157 7.2E-61 T 11-10-2018 IPR012347 Ferritin-like AVL55_02255 71d7a10b72bcc8bf2f2c85cb39670263 157 Pfam PF00210 Ferritin-like domain 18 155 8.2E-32 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AVL55_02255 71d7a10b72bcc8bf2f2c85cb39670263 157 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AVL55_02255 71d7a10b72bcc8bf2f2c85cb39670263 157 PIRSF PIRSF005900 1 157 6.3E-52 T 11-10-2018 IPR002177 DNA-binding protein Dps AVL55_02255 71d7a10b72bcc8bf2f2c85cb39670263 157 SUPERFAMILY SSF47240 4 156 2.13E-49 T 11-10-2018 IPR009078 Ferritin-like superfamily AVL55_02255 71d7a10b72bcc8bf2f2c85cb39670263 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 2.0E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps AVL55_02255 71d7a10b72bcc8bf2f2c85cb39670263 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 2.0E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps AVL55_02255 71d7a10b72bcc8bf2f2c85cb39670263 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 2.0E-12 T 11-10-2018 IPR002177 DNA-binding protein Dps AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 Pfam PF00270 DEAD/DEAH box helicase 39 183 5.7E-6 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 Pfam PF08482 ATP-dependent helicase C-terminal 763 894 1.1E-44 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 SMART SM00487 23 211 7.8E-16 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 SUPERFAMILY SSF52540 43 365 4.26E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 Gene3D G3DSA:3.40.50.300 11 202 1.2E-45 T 11-10-2018 AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 SMART SM00490 255 354 2.4E-13 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 SMART SM00847 413 509 1.8E-4 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 Pfam PF04408 Helicase associated domain (HA2) 414 510 5.9E-8 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 Pfam PF00271 Helicase conserved C-terminal domain 234 353 7.7E-13 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_01700 b8570f36a7df99422a01558e712a08bc 907 Gene3D G3DSA:3.40.50.300 205 373 1.2E-49 T 11-10-2018 AVL55_12165 0bc01560d1963dfc8fae439b54dbd0d8 413 Gene3D G3DSA:3.20.20.70 56 205 1.5E-7 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_12165 0bc01560d1963dfc8fae439b54dbd0d8 413 SUPERFAMILY SSF102114 49 199 1.1E-11 T 11-10-2018 AVL55_12165 0bc01560d1963dfc8fae439b54dbd0d8 413 SUPERFAMILY SSF47781 309 384 4.78E-11 T 11-10-2018 IPR010994 RuvA domain 2-like AVL55_12165 0bc01560d1963dfc8fae439b54dbd0d8 413 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 6 402 4.2E-162 T 11-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative AVL55_07925 bb34a0f56c426718c12c3e973b58ee08 419 Pfam PF06181 Urate oxidase N-terminal 4 296 5.3E-134 T 11-10-2018 IPR010389 Urate oxidase N-terminal AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 SMART SM00283 237 432 1.1E-18 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 260 8.6E-10 T 11-10-2018 IPR000014 PAS domain AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 SUPERFAMILY SSF55785 33 135 1.15E-8 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 Pfam PF08447 PAS fold 164 248 1.3E-9 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 Gene3D G3DSA:3.30.450.20 150 251 1.9E-17 T 11-10-2018 AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 SUPERFAMILY SSF58104 242 430 2.09E-50 T 11-10-2018 AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 Gene3D G3DSA:3.30.450.20 26 135 8.8E-7 T 11-10-2018 AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 300 430 3.2E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 Gene3D G3DSA:1.10.287.950 252 432 1.1E-43 T 11-10-2018 AVL55_04085 cf4f09e7a12364177a49bf86720672a7 432 SUPERFAMILY SSF55785 150 252 4.54E-19 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 SUPERFAMILY SSF51735 19 208 2.69E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 SMART SM00984 332 430 3.8E-31 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 SUPERFAMILY SSF52413 318 430 1.02E-27 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 PIRSF PIRSF000124 18 437 1.0E-59 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 215 305 3.2E-29 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 19 194 5.2E-44 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 332 429 4.9E-22 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 SUPERFAMILY SSF48179 215 307 1.16E-30 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 Gene3D G3DSA:3.40.50.720 213 434 1.4E-64 T 11-10-2018 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 PIRSF PIRSF500136 9 437 2.5E-143 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 Gene3D G3DSA:3.40.50.720 5 211 1.8E-57 T 11-10-2018 AVL55_05070 8b197f9f7795e90cd5f99df3e462bea5 438 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 19 426 3.5E-130 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AVL55_03800 0a45ddbd15761c28219eaf987b3a9607 497 Pfam PF15978 Tn7-like transposition protein D 284 478 3.0E-10 T 11-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 SUPERFAMILY SSF47323 316 459 6.28E-36 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 Gene3D G3DSA:1.20.120.640 306 459 1.7E-45 T 11-10-2018 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 7.0E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 7.0E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 7.0E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 7.0E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 Gene3D G3DSA:3.40.50.620 1 305 8.2E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.9E-135 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 SMART SM00840 342 402 9.9E-24 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 38.619 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 SUPERFAMILY SSF52374 2 312 3.22E-101 T 11-10-2018 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 Pfam PF09190 DALR domain 342 402 4.2E-19 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AVL55_12460 7c14d05ff2a3844b99472ca7eda4efcc 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 1.2E-180 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.376 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 PIRSF PIRSF006092 1 158 1.3E-53 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.6E-30 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 Gene3D G3DSA:3.10.50.30 76 158 7.6E-32 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 SUPERFAMILY SSF46557 3 78 7.46E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 Gene3D G3DSA:1.10.287.180 1 75 8.2E-31 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 SUPERFAMILY SSF54534 82 157 1.19E-24 T 11-10-2018 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 6.1E-29 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AVL55_07460 587e09f3f6bf58588a4ed90ad4b6c04d 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.4E-59 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AVL55_17895 bb409308e1ea4f5a50d64359701b0fcb 325 PIRSF PIRSF006431 1 320 3.5E-107 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AVL55_17895 bb409308e1ea4f5a50d64359701b0fcb 325 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 8.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AVL55_17895 bb409308e1ea4f5a50d64359701b0fcb 325 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 8.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AVL55_17895 bb409308e1ea4f5a50d64359701b0fcb 325 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 8.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AVL55_17895 bb409308e1ea4f5a50d64359701b0fcb 325 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 316 4.6E-99 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AVL55_17895 bb409308e1ea4f5a50d64359701b0fcb 325 Gene3D G3DSA:3.40.50.1820 1 317 1.6E-81 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_17895 bb409308e1ea4f5a50d64359701b0fcb 325 Pfam PF00561 alpha/beta hydrolase fold 36 299 1.2E-27 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_17895 bb409308e1ea4f5a50d64359701b0fcb 325 SUPERFAMILY SSF53474 3 300 1.63E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_04055 d2c1841e2fef9743df11007a43729bd6 147 SUPERFAMILY SSF46785 2 142 1.25E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_04055 d2c1841e2fef9743df11007a43729bd6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 3.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_04055 d2c1841e2fef9743df11007a43729bd6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 3.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_04055 d2c1841e2fef9743df11007a43729bd6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 3.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_04055 d2c1841e2fef9743df11007a43729bd6 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 3.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_04055 d2c1841e2fef9743df11007a43729bd6 147 Gene3D G3DSA:1.10.10.10 2 138 4.2E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_04055 d2c1841e2fef9743df11007a43729bd6 147 SMART SM00347 28 127 6.6E-20 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_04055 d2c1841e2fef9743df11007a43729bd6 147 Pfam PF01047 MarR family 35 92 1.4E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 SMART SM00116 139 187 0.037 T 11-10-2018 IPR000644 CBS domain AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 SMART SM00116 76 125 1.5 T 11-10-2018 IPR000644 CBS domain AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 Gene3D G3DSA:3.30.465.10 196 281 3.1E-25 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 SUPERFAMILY SSF54631 63 200 3.92E-35 T 11-10-2018 AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 Pfam PF00571 CBS domain 67 123 1.3E-6 T 11-10-2018 IPR000644 CBS domain AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 Pfam PF00571 CBS domain 136 187 1.9E-6 T 11-10-2018 IPR000644 CBS domain AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 Gene3D G3DSA:3.10.580.10 46 195 9.5E-54 T 11-10-2018 AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 SUPERFAMILY SSF56176 203 282 2.67E-20 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 SMART SM01091 205 283 7.2E-24 T 11-10-2018 IPR005170 Transporter-associated domain AVL55_07505 9e3f98c1d4abdb211d4ebd30eaf4a0c7 285 Pfam PF03471 Transporter associated domain 208 281 4.4E-19 T 11-10-2018 IPR005170 Transporter-associated domain AVL55_00845 a18f2cad9a88bd0f7d7fc6f2957860a5 78 Pfam PF13627 Prokaryotic lipoprotein-attachment site 19 40 5.5E-7 T 11-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 SUPERFAMILY SSF81624 2 127 1.44E-19 T 11-10-2018 IPR035937 MutM-like, N-terminal AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 Gene3D G3DSA:1.10.8.50 128 272 1.4E-33 T 11-10-2018 AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 SUPERFAMILY SSF57716 233 271 1.74E-10 T 11-10-2018 AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 217 2.6E-13 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 Gene3D G3DSA:3.20.190.10 2 127 1.1E-24 T 11-10-2018 IPR035937 MutM-like, N-terminal AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 2.3E-8 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 SUPERFAMILY SSF46946 126 217 9.42E-20 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 Pfam PF06827 Zinc finger found in FPG and IleRS 246 271 5.8E-5 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 SMART SM00898 2 110 3.6E-7 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AVL55_14835 3c45d19064087696feac02cb5df2ac5c 273 SMART SM01232 126 219 3.8E-17 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AVL55_10035 869fa95a49fbbdafde1fdd7b869eb884 626 SUPERFAMILY SSF56112 44 309 6.97E-33 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_10035 869fa95a49fbbdafde1fdd7b869eb884 626 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 51 73 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AVL55_10035 869fa95a49fbbdafde1fdd7b869eb884 626 Gene3D G3DSA:1.10.510.10 43 383 2.5E-23 T 11-10-2018 AVL55_10035 869fa95a49fbbdafde1fdd7b869eb884 626 SMART SM00220 45 312 4.8E-7 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AVL55_10035 869fa95a49fbbdafde1fdd7b869eb884 626 Pfam PF00069 Protein kinase domain 45 268 2.9E-15 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AVL55_03505 37e6f72ad89856f9161d8946e482c43a 421 SUPERFAMILY SSF81342 6 297 5.34E-88 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AVL55_03505 37e6f72ad89856f9161d8946e482c43a 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 296 397 3.2E-40 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AVL55_03505 37e6f72ad89856f9161d8946e482c43a 421 SUPERFAMILY SSF81648 298 412 8.07E-33 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AVL55_03505 37e6f72ad89856f9161d8946e482c43a 421 PIRSF PIRSF038885 1 421 8.4E-151 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AVL55_03505 37e6f72ad89856f9161d8946e482c43a 421 Pfam PF00033 Cytochrome b/b6/petB 24 211 5.6E-65 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AVL55_03505 37e6f72ad89856f9161d8946e482c43a 421 Gene3D G3DSA:1.20.810.10 1 421 2.9E-144 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 AVL55_11565 015ddf01615d8c83ed812f1dbdfd1124 130 Pfam PF02566 OsmC-like protein 27 125 1.3E-19 T 11-10-2018 IPR003718 OsmC/Ohr family AVL55_11565 015ddf01615d8c83ed812f1dbdfd1124 130 Gene3D G3DSA:2.20.25.10 1 33 7.6E-8 T 11-10-2018 AVL55_11565 015ddf01615d8c83ed812f1dbdfd1124 130 Gene3D G3DSA:3.30.300.20 34 130 1.4E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AVL55_11565 015ddf01615d8c83ed812f1dbdfd1124 130 SUPERFAMILY SSF82784 1 129 1.23E-37 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AVL55_00900 db6c35b744fdc444e749117ea1b2e311 232 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 130 220 6.9E-12 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AVL55_00900 db6c35b744fdc444e749117ea1b2e311 232 SMART SM00702 3 221 2.4E-4 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Gene3D G3DSA:1.20.1640.10 341 526 5.0E-20 T 11-10-2018 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Pfam PF07549 SecD/SecF GG Motif 40 64 9.9E-5 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Pfam PF07549 SecD/SecF GG Motif 567 588 1.7E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 544 832 25.006 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Gene3D G3DSA:3.30.70.3400 155 340 2.7E-56 T 11-10-2018 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 522 39.46 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Gene3D G3DSA:3.30.1360.200 212 338 2.7E-56 T 11-10-2018 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 SUPERFAMILY SSF82866 252 514 7.59E-40 T 11-10-2018 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Pfam PF02355 Protein export membrane protein 341 507 6.7E-18 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Pfam PF02355 Protein export membrane protein 646 829 3.2E-54 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 PRINTS PR01755 Bacterial translocase SecF protein signature 769 784 2.9E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 PRINTS PR01755 Bacterial translocase SecF protein signature 571 586 2.9E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 PRINTS PR01755 Bacterial translocase SecF protein signature 689 703 2.9E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 PRINTS PR01755 Bacterial translocase SecF protein signature 737 755 2.9E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 572 820 2.9E-65 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 507 3.8E-131 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 270 500 4.4E-75 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 Gene3D G3DSA:1.20.1640.10 664 852 3.0E-19 T 11-10-2018 AVL55_03865 27637da8f43b2bda3dcb59b091280ef3 855 SUPERFAMILY SSF82866 646 834 1.28E-40 T 11-10-2018 AVL55_10365 bdf74ff32f405bb21b5d8291db3a45d7 242 Gene3D G3DSA:3.40.570.10 45 218 1.6E-5 T 11-10-2018 AVL55_10365 bdf74ff32f405bb21b5d8291db3a45d7 242 SUPERFAMILY SSF54060 109 202 1.88E-6 T 11-10-2018 AVL55_03680 8fee1b45a926a76f63e6a2ddf8c20d31 194 Gene3D G3DSA:1.20.1540.10 9 194 3.1E-13 T 11-10-2018 IPR035952 Rhomboid-like superfamily AVL55_03680 8fee1b45a926a76f63e6a2ddf8c20d31 194 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 33 184 8.1E-54 T 11-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria AVL55_03680 8fee1b45a926a76f63e6a2ddf8c20d31 194 SUPERFAMILY SSF144091 17 191 6.28E-25 T 11-10-2018 AVL55_03680 8fee1b45a926a76f63e6a2ddf8c20d31 194 Pfam PF01694 Rhomboid family 43 188 1.4E-8 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AVL55_10080 a748a7816854edb660ce8ab27dbee43a 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 2.2E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_10080 a748a7816854edb660ce8ab27dbee43a 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 2.2E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_10080 a748a7816854edb660ce8ab27dbee43a 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 318 338 2.2E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_10080 a748a7816854edb660ce8ab27dbee43a 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 2.2E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_10080 a748a7816854edb660ce8ab27dbee43a 444 SUPERFAMILY SSF161070 4 443 4.18E-116 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AVL55_10080 a748a7816854edb660ce8ab27dbee43a 444 Pfam PF00209 Sodium:neurotransmitter symporter family 137 443 8.2E-24 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_10080 a748a7816854edb660ce8ab27dbee43a 444 Pfam PF00209 Sodium:neurotransmitter symporter family 4 128 1.4E-21 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_03220 64fab082248d1ae7a3d0575414b2e726 252 Pfam PF11932 Protein of unknown function (DUF3450) 8 248 1.4E-95 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AVL55_03220 64fab082248d1ae7a3d0575414b2e726 252 PIRSF PIRSF028069 1 252 2.7E-86 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AVL55_16745 9ca9eaae883357bfa9417d0597ad5807 248 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 13 243 38.36 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AVL55_16745 9ca9eaae883357bfa9417d0597ad5807 248 SUPERFAMILY SSF52402 23 208 4.54E-54 T 11-10-2018 AVL55_16745 9ca9eaae883357bfa9417d0597ad5807 248 Gene3D G3DSA:3.40.50.620 5 216 1.6E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_16745 9ca9eaae883357bfa9417d0597ad5807 248 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 2.6E-50 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AVL55_16745 9ca9eaae883357bfa9417d0597ad5807 248 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.8E-81 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AVL55_16745 9ca9eaae883357bfa9417d0597ad5807 248 PIRSF PIRSF000857 1 246 3.4E-58 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AVL55_16745 9ca9eaae883357bfa9417d0597ad5807 248 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 2.1E-85 T 11-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AVL55_07495 413eff99f48b838547b9cb2db327b60d 432 SUPERFAMILY SSF51556 86 386 7.85E-108 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_07495 413eff99f48b838547b9cb2db327b60d 432 SUPERFAMILY SSF51338 30 428 4.53E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_07495 413eff99f48b838547b9cb2db327b60d 432 Gene3D G3DSA:2.30.40.10 36 426 2.5E-148 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_07495 413eff99f48b838547b9cb2db327b60d 432 Pfam PF01979 Amidohydrolase family 82 427 2.3E-53 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AVL55_07495 413eff99f48b838547b9cb2db327b60d 432 Gene3D G3DSA:3.20.20.140 88 389 2.5E-148 T 11-10-2018 AVL55_17505 c8747b9622fe216143539e12a63fd9ec 118 Gene3D G3DSA:1.10.8.50 1 71 3.2E-25 T 11-10-2018 AVL55_17505 c8747b9622fe216143539e12a63fd9ec 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.329 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17505 c8747b9622fe216143539e12a63fd9ec 118 PIRSF PIRSF002134 1 118 1.0E-38 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17505 c8747b9622fe216143539e12a63fd9ec 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.9E-30 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17505 c8747b9622fe216143539e12a63fd9ec 118 SUPERFAMILY SSF46946 2 114 7.46E-42 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AVL55_17505 c8747b9622fe216143539e12a63fd9ec 118 Gene3D G3DSA:4.10.910.10 72 118 3.7E-25 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17505 c8747b9622fe216143539e12a63fd9ec 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 6.9E-51 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17505 c8747b9622fe216143539e12a63fd9ec 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_00775 39b9227bccd987d172d76327522c66dd 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 148 207 8.4E-7 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AVL55_00775 39b9227bccd987d172d76327522c66dd 222 SUPERFAMILY SSF47616 85 217 7.52E-21 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_00775 39b9227bccd987d172d76327522c66dd 222 SUPERFAMILY SSF52833 1 77 2.56E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_00775 39b9227bccd987d172d76327522c66dd 222 Gene3D G3DSA:1.20.1050.10 85 212 6.0E-25 T 11-10-2018 AVL55_00775 39b9227bccd987d172d76327522c66dd 222 Gene3D G3DSA:3.40.30.10 1 82 3.9E-32 T 11-10-2018 AVL55_00775 39b9227bccd987d172d76327522c66dd 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 75 4.0E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 PRINTS PR01009 Flagellar M-ring protein signature 135 153 1.1E-23 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 PRINTS PR01009 Flagellar M-ring protein signature 280 298 1.1E-23 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 PRINTS PR01009 Flagellar M-ring protein signature 358 382 1.1E-23 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 PRINTS PR01009 Flagellar M-ring protein signature 210 228 1.1E-23 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 PRINTS PR01009 Flagellar M-ring protein signature 167 181 1.1E-23 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 Pfam PF08345 Flagellar M-ring protein C-terminal 267 434 1.1E-43 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 PIRSF PIRSF004862 14 564 6.3E-130 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 35 563 5.6E-76 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 Gene3D G3DSA:3.30.300.30 136 235 2.2E-7 T 11-10-2018 AVL55_05120 a09056ca8407c4d67dbb3a6ab9ea3358 564 Pfam PF01514 Secretory protein of YscJ/FliF family 47 234 2.1E-51 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF AVL55_19370 71efc6f1f24e8924c818ade8393dc7f3 348 Gene3D G3DSA:1.10.40.60 111 240 3.5E-80 T 11-10-2018 IPR038072 GspK, central domain superfamily AVL55_19370 71efc6f1f24e8924c818ade8393dc7f3 348 Pfam PF03934 Type II secretion system (T2SS), protein K 42 335 1.4E-82 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AVL55_19370 71efc6f1f24e8924c818ade8393dc7f3 348 PIRSF PIRSF002786 12 347 1.1E-69 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AVL55_19370 71efc6f1f24e8924c818ade8393dc7f3 348 Gene3D G3DSA:1.10.40.60 241 306 3.5E-80 T 11-10-2018 IPR038072 GspK, central domain superfamily AVL55_19370 71efc6f1f24e8924c818ade8393dc7f3 348 SUPERFAMILY SSF158544 113 236 9.42E-28 T 11-10-2018 IPR038072 GspK, central domain superfamily AVL55_19370 71efc6f1f24e8924c818ade8393dc7f3 348 SUPERFAMILY SSF158544 240 306 5.23E-16 T 11-10-2018 IPR038072 GspK, central domain superfamily AVL55_19370 71efc6f1f24e8924c818ade8393dc7f3 348 Gene3D G3DSA:3.30.1300.30 54 329 3.5E-80 T 11-10-2018 AVL55_19370 71efc6f1f24e8924c818ade8393dc7f3 348 SUPERFAMILY SSF54523 48 346 7.3E-28 T 11-10-2018 AVL55_09280 7e6fc1b990f56d4ec48c2119f55d6b5e 209 PIRSF PIRSF005461 1 209 1.2E-80 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AVL55_09280 7e6fc1b990f56d4ec48c2119f55d6b5e 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 29.293 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AVL55_09280 7e6fc1b990f56d4ec48c2119f55d6b5e 209 SUPERFAMILY SSF53335 4 208 9.31E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_09280 7e6fc1b990f56d4ec48c2119f55d6b5e 209 Gene3D G3DSA:3.40.50.150 30 209 4.5E-62 T 11-10-2018 AVL55_09280 7e6fc1b990f56d4ec48c2119f55d6b5e 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 2.5E-56 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AVL55_09835 8f7a300d7081c3ccabfee38f546a0e74 546 SUPERFAMILY SSF52172 4 143 1.42E-24 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_09835 8f7a300d7081c3ccabfee38f546a0e74 546 SUPERFAMILY SSF48452 172 497 3.8E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_09835 8f7a300d7081c3ccabfee38f546a0e74 546 Pfam PF00072 Response regulator receiver domain 8 123 9.4E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_09835 8f7a300d7081c3ccabfee38f546a0e74 546 SMART SM00028 451 484 34.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09835 8f7a300d7081c3ccabfee38f546a0e74 546 SMART SM00028 231 264 27.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09835 8f7a300d7081c3ccabfee38f546a0e74 546 SMART SM00028 197 230 3.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09835 8f7a300d7081c3ccabfee38f546a0e74 546 SMART SM00448 6 123 1.7E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_09835 8f7a300d7081c3ccabfee38f546a0e74 546 Gene3D G3DSA:3.40.50.2300 4 130 3.2E-21 T 11-10-2018 AVL55_09835 8f7a300d7081c3ccabfee38f546a0e74 546 Gene3D G3DSA:1.25.40.10 131 339 6.6E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PIRSF PIRSF037149 1 834 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 620 7.8E-12 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 Gene3D G3DSA:1.10.10.1100 422 476 6.7E-11 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 9.5E-10 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 Gene3D G3DSA:3.50.50.60 112 247 3.6E-84 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 SUPERFAMILY SSF56014 632 807 2.09E-51 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 5.8E-17 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 5.8E-17 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.8E-17 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.8E-17 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 5.8E-17 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 6.5E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 6.5E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 288 1.8E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 SUPERFAMILY SSF51905 5 191 1.41E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 10 800 0.0 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 755 2.0E-18 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 SUPERFAMILY SSF55124 501 640 1.16E-27 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 SUPERFAMILY SSF51905 151 311 3.49E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 Gene3D G3DSA:3.50.50.60 11 284 3.6E-84 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 5.2E-8 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 5.2E-8 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 5.2E-8 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 5.2E-8 T 11-10-2018 AVL55_02955 fc4df601acaefa59eae329b459ebf0a9 849 Gene3D G3DSA:3.30.413.10 631 783 4.9E-33 T 11-10-2018 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 Pfam PF00245 Alkaline phosphatase 44 447 5.1E-92 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 PRINTS PR00113 Alkaline phosphatase signature 98 113 2.4E-29 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 PRINTS PR00113 Alkaline phosphatase signature 43 63 2.4E-29 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 PRINTS PR00113 Alkaline phosphatase signature 135 155 2.4E-29 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 PRINTS PR00113 Alkaline phosphatase signature 250 279 2.4E-29 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 PRINTS PR00113 Alkaline phosphatase signature 185 195 2.4E-29 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 SMART SM00098 44 451 2.8E-90 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 ProSitePatterns PS00123 Alkaline phosphatase active site. 98 106 - T 11-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 Gene3D G3DSA:1.10.60.40 326 410 1.7E-129 T 11-10-2018 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 Gene3D G3DSA:3.40.720.10 47 441 1.7E-129 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AVL55_13955 21f3a7cd0e729ca5a6a3ee4e9286cc95 492 SUPERFAMILY SSF53649 36 450 8.68E-104 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 697 9.8E-259 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 PIRSF PIRSF005419 7 699 2.1E-242 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 Gene3D G3DSA:3.40.30.60 365 508 2.3E-50 T 11-10-2018 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 Gene3D G3DSA:1.10.490.80 600 697 1.3E-12 T 11-10-2018 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 Pfam PF00771 FHIPEP family 31 689 5.6E-262 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 Gene3D G3DSA:1.10.8.540 509 598 6.1E-25 T 11-10-2018 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.5E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.5E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.5E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.5E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.5E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.5E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AVL55_05190 f0d6a4147c645592039772cbc039d4aa 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 11-10-2018 IPR025505 FHIPEP conserved site AVL55_00380 626dc4585ab3c8c3e8ca695ef23b8ae2 96 Pfam PF01381 Helix-turn-helix 16 62 3.1E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_00380 626dc4585ab3c8c3e8ca695ef23b8ae2 96 SUPERFAMILY SSF47413 7 62 1.27E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_00380 626dc4585ab3c8c3e8ca695ef23b8ae2 96 SMART SM00530 14 67 4.6E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_00380 626dc4585ab3c8c3e8ca695ef23b8ae2 96 Gene3D G3DSA:1.10.260.40 3 72 4.4E-12 T 11-10-2018 AVL55_02330 46531e27e3bebede99b637b215f13df0 356 SUPERFAMILY SSF82689 180 263 1.31E-6 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AVL55_02330 46531e27e3bebede99b637b215f13df0 356 Pfam PF00924 Mechanosensitive ion channel 66 259 4.1E-19 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_02330 46531e27e3bebede99b637b215f13df0 356 SUPERFAMILY SSF50182 109 170 1.96E-11 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_02330 46531e27e3bebede99b637b215f13df0 356 Gene3D G3DSA:2.30.30.60 124 171 1.3E-7 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_08795 ff5a3cb05d51de92339cfde199e166d0 130 Pfam PF12514 Protein of unknown function (DUF3718) 32 100 2.0E-20 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 AVL55_03240 9f887f9350ec9379d08cd997613e340d 202 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 123 198 1.7E-15 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AVL55_03240 9f887f9350ec9379d08cd997613e340d 202 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 122 199 3.8E-19 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AVL55_03240 9f887f9350ec9379d08cd997613e340d 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 138 156 1.5E-12 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_03240 9f887f9350ec9379d08cd997613e340d 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 59 69 1.5E-12 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_03240 9f887f9350ec9379d08cd997613e340d 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 117 138 1.5E-12 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_03240 9f887f9350ec9379d08cd997613e340d 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 174 1.5E-12 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_03240 9f887f9350ec9379d08cd997613e340d 202 Gene3D G3DSA:3.30.1150.10 107 201 1.4E-23 T 11-10-2018 AVL55_03240 9f887f9350ec9379d08cd997613e340d 202 SUPERFAMILY SSF74653 113 194 5.62E-25 T 11-10-2018 AVL55_17705 5daa0bab9a4fba658eaefed7d2f34ebd 678 Pfam PF01432 Peptidase family M3 222 675 4.1E-154 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AVL55_17705 5daa0bab9a4fba658eaefed7d2f34ebd 678 Gene3D G3DSA:1.10.1370.40 15 673 6.9E-263 T 11-10-2018 AVL55_17705 5daa0bab9a4fba658eaefed7d2f34ebd 678 Gene3D G3DSA:1.10.1370.10 140 608 6.9E-263 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AVL55_17705 5daa0bab9a4fba658eaefed7d2f34ebd 678 SUPERFAMILY SSF55486 9 675 2.81E-203 T 11-10-2018 AVL55_05505 d76f29423e831a5259bbd24f373982d8 141 SUPERFAMILY SSF54637 3 118 1.63E-23 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_05505 d76f29423e831a5259bbd24f373982d8 141 Gene3D G3DSA:3.10.129.10 1 128 2.0E-21 T 11-10-2018 AVL55_05505 d76f29423e831a5259bbd24f373982d8 141 Pfam PF03061 Thioesterase superfamily 19 92 1.5E-11 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AVL55_19910 267dcb9f14d42ed9104fb0648e94bb3f 96 Pfam PF13560 Helix-turn-helix domain 16 82 1.6E-8 T 11-10-2018 AVL55_19910 267dcb9f14d42ed9104fb0648e94bb3f 96 Gene3D G3DSA:1.10.260.40 6 79 1.7E-7 T 11-10-2018 AVL55_19910 267dcb9f14d42ed9104fb0648e94bb3f 96 SUPERFAMILY SSF47413 16 66 1.41E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_08180 e5d3c5a170dfa1b3dd4f00d2911eb644 370 Gene3D G3DSA:3.40.50.2000 1 183 4.3E-24 T 11-10-2018 AVL55_08180 e5d3c5a170dfa1b3dd4f00d2911eb644 370 Pfam PF13439 Glycosyltransferase Family 4 15 175 8.5E-16 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AVL55_08180 e5d3c5a170dfa1b3dd4f00d2911eb644 370 SUPERFAMILY SSF53756 1 362 2.06E-63 T 11-10-2018 AVL55_08180 e5d3c5a170dfa1b3dd4f00d2911eb644 370 Pfam PF00534 Glycosyl transferases group 1 198 329 3.3E-27 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_08180 e5d3c5a170dfa1b3dd4f00d2911eb644 370 Gene3D G3DSA:3.40.50.2000 189 336 1.5E-32 T 11-10-2018 AVL55_04170 4cff3f5d144fe3bd5859dfbd8988c1b1 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 288 5.7E-21 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AVL55_04170 4cff3f5d144fe3bd5859dfbd8988c1b1 344 Pfam PF01548 Transposase 6 146 1.4E-19 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.8E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.8E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.8E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.8E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 2.8E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.8E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1034 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 SUPERFAMILY SSF82866 299 508 4.32E-36 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 SUPERFAMILY SSF82714 192 275 4.71E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 Gene3D G3DSA:3.30.70.1430 42 822 4.2E-283 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 Gene3D G3DSA:3.30.2090.10 726 814 4.2E-283 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 SUPERFAMILY SSF82866 813 1033 8.89E-52 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 Pfam PF00873 AcrB/AcrD/AcrF family 5 1031 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 SUPERFAMILY SSF82693 568 667 5.75E-6 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 Gene3D G3DSA:3.30.2090.10 189 280 4.2E-283 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 SUPERFAMILY SSF82693 155 333 4.71E-18 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 SUPERFAMILY SSF82693 42 127 8.02E-21 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 Gene3D G3DSA:3.30.70.1430 570 674 4.2E-283 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 SUPERFAMILY SSF82714 725 807 1.16E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 Gene3D G3DSA:1.20.1640.10 517 1027 4.2E-283 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 Gene3D G3DSA:3.30.70.1440 675 872 4.2E-283 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 Gene3D G3DSA:3.30.70.1320 135 333 4.2E-283 T 11-10-2018 AVL55_00635 784f06246d183203da7ebeb1a20bd363 1036 Gene3D G3DSA:1.20.1640.10 16 516 4.2E-283 T 11-10-2018 AVL55_12105 67af27b5e320be1a36dcd27f49e83518 732 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 135 721 1.3E-182 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AVL55_12105 67af27b5e320be1a36dcd27f49e83518 732 Pfam PF02446 4-alpha-glucanotransferase 184 703 2.5E-122 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AVL55_12105 67af27b5e320be1a36dcd27f49e83518 732 Gene3D G3DSA:3.20.20.80 177 722 1.8E-114 T 11-10-2018 AVL55_12105 67af27b5e320be1a36dcd27f49e83518 732 SUPERFAMILY SSF51445 178 718 2.75E-142 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_10935 d8b27fb9b13276d69edd2b651cacd301 115 Gene3D G3DSA:1.10.10.370 45 115 7.9E-31 T 11-10-2018 AVL55_10935 d8b27fb9b13276d69edd2b651cacd301 115 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 9 115 2.7E-48 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AVL55_10935 d8b27fb9b13276d69edd2b651cacd301 115 Pfam PF04358 DsrC like protein 10 115 5.5E-43 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AVL55_10935 d8b27fb9b13276d69edd2b651cacd301 115 Gene3D G3DSA:3.30.1420.10 7 44 2.0E-8 T 11-10-2018 AVL55_10935 d8b27fb9b13276d69edd2b651cacd301 115 PIRSF PIRSF006223 8 115 1.8E-39 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AVL55_10935 d8b27fb9b13276d69edd2b651cacd301 115 SUPERFAMILY SSF69721 6 115 1.05E-39 T 11-10-2018 IPR025526 DsrC-like domain superfamily AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Pfam PF02142 MGS-like domain 956 1041 8.9E-16 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 SMART SM00851 955 1041 2.8E-27 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 SUPERFAMILY SSF52335 935 1070 4.19E-37 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 SUPERFAMILY SSF56059 128 401 2.47E-108 T 11-10-2018 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 SUPERFAMILY SSF48108 396 554 1.96E-51 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Gene3D G3DSA:3.40.50.1380 936 1072 4.5E-36 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.3E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.3E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 SUPERFAMILY SSF52440 556 675 4.6E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 SMART SM01096 424 547 1.5E-71 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.43 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Gene3D G3DSA:3.30.470.20 665 935 3.5E-124 T 11-10-2018 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 5.3E-72 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 1.1E-37 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 SUPERFAMILY SSF52440 1 127 4.03E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Gene3D G3DSA:3.30.470.20 119 403 2.7E-128 T 11-10-2018 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Gene3D G3DSA:3.40.50.20 1 116 1.2E-49 T 11-10-2018 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 SUPERFAMILY SSF56059 673 932 2.12E-105 T 11-10-2018 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.154 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Gene3D G3DSA:3.40.50.20 554 662 2.5E-49 T 11-10-2018 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 6.4E-39 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AVL55_07455 aafa29ae63e79d29bc14b2cc973093c6 1073 Gene3D G3DSA:1.10.1030.10 404 553 1.2E-48 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 Gene3D G3DSA:1.10.155.10 2 74 3.3E-10 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 SUPERFAMILY SSF53335 76 271 2.78E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 Gene3D G3DSA:3.40.50.150 75 275 1.2E-58 T 11-10-2018 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 4.3E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 4.3E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 4.3E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 4.3E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 4.3E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 4.3E-41 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 11 57 4.6E-10 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 SMART SM00138 8 273 5.7E-97 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 SUPERFAMILY SSF47757 6 75 9.15E-15 T 11-10-2018 AVL55_04845 d29d75d205a3b6efc10d8b111e432929 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.2E-62 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AVL55_17170 00e6bc657707ef892e4f80201a554721 568 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 559 4.2E-262 T 11-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily AVL55_17170 00e6bc657707ef892e4f80201a554721 568 Gene3D G3DSA:1.20.1730.10 4 332 1.4E-39 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AVL55_17170 00e6bc657707ef892e4f80201a554721 568 Gene3D G3DSA:1.20.1730.10 348 561 1.8E-26 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AVL55_17170 00e6bc657707ef892e4f80201a554721 568 Pfam PF00474 Sodium:solute symporter family 375 490 1.1E-14 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_17170 00e6bc657707ef892e4f80201a554721 568 Pfam PF00474 Sodium:solute symporter family 33 303 3.1E-36 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_07245 0e501a9e92e3671bcb6f2db98749005b 89 Pfam PF13670 Peptidase propeptide and YPEB domain 9 84 1.2E-7 T 11-10-2018 IPR025711 PepSY domain AVL55_04410 213b35e2992dd7ac6533d45849541694 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 1.1E-156 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 59.833 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 SUPERFAMILY SSF53732 2 464 1.57E-161 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 Gene3D G3DSA:3.30.499.20 4 285 4.6E-98 T 11-10-2018 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 Gene3D G3DSA:3.30.499.10 325 466 5.6E-51 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 463 4.3E-246 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 PRINTS PR00415 Aconitase family signature 342 353 2.9E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 PRINTS PR00415 Aconitase family signature 107 115 2.9E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 PRINTS PR00415 Aconitase family signature 118 131 2.9E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 PRINTS PR00415 Aconitase family signature 194 207 2.9E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 PRINTS PR00415 Aconitase family signature 285 299 2.9E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 PRINTS PR00415 Aconitase family signature 398 411 2.9E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 PRINTS PR00415 Aconitase family signature 81 94 2.9E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 PRINTS PR00415 Aconitase family signature 208 221 2.9E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 PRINTS PR00415 Aconitase family signature 132 147 2.9E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_04410 213b35e2992dd7ac6533d45849541694 466 ProSitePatterns PS01244 Aconitase family signature 2. 398 411 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AVL55_04875 813eb97db54fcc099b2bcdfd94adb88a 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 2.1E-109 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AVL55_04875 813eb97db54fcc099b2bcdfd94adb88a 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 5.8E-23 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AVL55_04875 813eb97db54fcc099b2bcdfd94adb88a 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 244 5.3E-29 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AVL55_04875 813eb97db54fcc099b2bcdfd94adb88a 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 8.3E-40 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AVL55_04875 813eb97db54fcc099b2bcdfd94adb88a 262 Pfam PF00460 Flagella basal body rod protein 5 35 8.1E-11 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AVL55_04875 813eb97db54fcc099b2bcdfd94adb88a 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AVL55_04875 813eb97db54fcc099b2bcdfd94adb88a 262 SUPERFAMILY SSF117143 93 223 4.84E-32 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 291 61.381 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 6.4E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 6.4E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 6.4E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 6.4E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 6.4E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 251 267 6.4E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 Gene3D G3DSA:3.30.930.10 1 214 3.9E-111 T 11-10-2018 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 SUPERFAMILY SSF55681 8 290 1.24E-137 T 11-10-2018 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 299 9.5E-172 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 290 1.8E-152 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00035 6537618ac8bace40890a53bb45b0064e 301 Gene3D G3DSA:1.20.58.180 215 296 5.7E-36 T 11-10-2018 AVL55_15625 f2bb2dbc40f32b102f46460bece00381 142 Gene3D G3DSA:3.30.530.20 1 140 2.6E-11 T 11-10-2018 IPR023393 START-like domain superfamily AVL55_15625 f2bb2dbc40f32b102f46460bece00381 142 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 139 1.5E-10 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase AVL55_15625 f2bb2dbc40f32b102f46460bece00381 142 SUPERFAMILY SSF55961 5 140 2.43E-13 T 11-10-2018 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 463 470 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 9 611 29.568 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 Gene3D G3DSA:3.40.630.10 293 611 8.8E-118 T 11-10-2018 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 300 602 5.2E-107 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 PRINTS PR00481 Cytosol aminopeptidase signature 459 479 1.3E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 PRINTS PR00481 Cytosol aminopeptidase signature 378 395 1.3E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 PRINTS PR00481 Cytosol aminopeptidase signature 437 458 1.3E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 PRINTS PR00481 Cytosol aminopeptidase signature 400 421 1.3E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 PRINTS PR00481 Cytosol aminopeptidase signature 487 502 1.3E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_14240 04cc7d3e197943b6e290dc2bf0099eda 615 SUPERFAMILY SSF53187 294 609 1.44E-106 T 11-10-2018 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 Pfam PF05746 DALR anticodon binding domain 459 576 1.7E-29 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 Gene3D G3DSA:3.40.50.620 106 452 1.0E-107 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 302 323 3.9E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 113 128 3.9E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 165 3.9E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 144 3.9E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 SMART SM00836 459 576 4.7E-33 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 Gene3D G3DSA:1.10.730.10 453 576 1.3E-33 T 11-10-2018 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 Pfam PF00750 tRNA synthetases class I (R) 103 445 5.2E-133 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 121 132 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 9 86 4.9E-23 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 Gene3D G3DSA:3.30.1360.70 1 105 6.7E-31 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 26.972 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 SUPERFAMILY SSF52374 109 452 4.22E-89 T 11-10-2018 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 SMART SM01016 5 86 6.8E-29 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 1.9E-174 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 SUPERFAMILY SSF47323 454 576 4.25E-33 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_06150 16bed289bf944f02316a401dd1a821f6 576 SUPERFAMILY SSF55190 1 95 1.27E-21 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AVL55_18040 66cd06aab2a53689e6d6a148825c40f3 392 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 83 160 1.7E-18 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AVL55_18040 66cd06aab2a53689e6d6a148825c40f3 392 SUPERFAMILY SSF74653 76 152 1.31E-21 T 11-10-2018 AVL55_18040 66cd06aab2a53689e6d6a148825c40f3 392 Gene3D G3DSA:3.30.1150.10 60 161 1.2E-24 T 11-10-2018 AVL55_18040 66cd06aab2a53689e6d6a148825c40f3 392 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 84 159 4.0E-14 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AVL55_08480 ef1ba916a85150330f470d50f19e86af 303 SUPERFAMILY SSF55073 157 271 1.8E-21 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_08480 ef1ba916a85150330f470d50f19e86af 303 SMART SM00267 133 303 1.2E-7 T 11-10-2018 IPR000160 GGDEF domain AVL55_08480 ef1ba916a85150330f470d50f19e86af 303 Gene3D G3DSA:3.30.70.270 137 301 9.9E-26 T 11-10-2018 AVL55_08480 ef1ba916a85150330f470d50f19e86af 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 267 3.6E-21 T 11-10-2018 IPR000160 GGDEF domain AVL55_08480 ef1ba916a85150330f470d50f19e86af 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 277 2.7E-23 T 11-10-2018 IPR000160 GGDEF domain AVL55_15415 8678f6c635ac419431624c05f04d1d1e 228 Pfam PF01168 Alanine racemase, N-terminal domain 18 227 6.0E-29 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AVL55_15415 8678f6c635ac419431624c05f04d1d1e 228 PIRSF PIRSF004848 1 228 4.3E-78 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AVL55_15415 8678f6c635ac419431624c05f04d1d1e 228 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 2.5E-84 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AVL55_15415 8678f6c635ac419431624c05f04d1d1e 228 Gene3D G3DSA:3.20.20.10 1 228 2.4E-85 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_15415 8678f6c635ac419431624c05f04d1d1e 228 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 226 33.218 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AVL55_15415 8678f6c635ac419431624c05f04d1d1e 228 SUPERFAMILY SSF51419 1 225 5.63E-82 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_15415 8678f6c635ac419431624c05f04d1d1e 228 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 SUPERFAMILY SSF52218 69 216 9.29E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 15 607 5.6E-253 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 Gene3D G3DSA:3.40.50.360 60 224 1.6E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 Pfam PF00175 Oxidoreductase NAD-binding domain 465 571 2.5E-18 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 Gene3D G3DSA:3.40.50.80 453 607 1.5E-58 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PIRSF PIRSF000207 1 607 3.3E-256 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 Pfam PF00667 FAD binding domain 240 432 3.2E-25 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 Gene3D G3DSA:2.40.30.10 240 447 6.6E-70 T 11-10-2018 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 SUPERFAMILY SSF63380 237 454 5.61E-61 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00369 Flavodoxin signature 119 130 6.4E-13 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00369 Flavodoxin signature 71 84 6.4E-13 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00369 Flavodoxin signature 175 194 6.4E-13 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00369 Flavodoxin signature 151 161 6.4E-13 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 Gene3D G3DSA:1.20.990.10 288 392 6.6E-70 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 Pfam PF00258 Flavodoxin 72 201 1.1E-31 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 549 6.1E-25 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 6.1E-25 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 502 513 6.1E-25 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 288 6.1E-25 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 556 564 6.1E-25 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 489 498 6.1E-25 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 401 6.1E-25 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_16755 0855b06bf35504ac6757795c18639b0d 607 SUPERFAMILY SSF52343 452 607 3.01E-51 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_10505 c6221f4ee60e8d4641d3729e42c1362b 267 SUPERFAMILY SSF56349 23 252 7.06E-17 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_10505 c6221f4ee60e8d4641d3729e42c1362b 267 Pfam PF00589 Phage integrase family 27 242 1.5E-8 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_10505 c6221f4ee60e8d4641d3729e42c1362b 267 Gene3D G3DSA:1.10.443.10 23 241 1.8E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_10120 4af9f6c078cd8050d70cf6b2cc55bd5c 1612 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1604 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AVL55_10120 4af9f6c078cd8050d70cf6b2cc55bd5c 1612 SUPERFAMILY SSF53223 757 944 1.53E-24 T 11-10-2018 AVL55_10120 4af9f6c078cd8050d70cf6b2cc55bd5c 1612 PIRSF PIRSF036761 1 1611 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AVL55_10120 4af9f6c078cd8050d70cf6b2cc55bd5c 1612 SUPERFAMILY SSF51735 948 1230 3.61E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_15030 3d0c52ab60a06d207ee72848048acedb 188 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 174 7.5E-40 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AVL55_15030 3d0c52ab60a06d207ee72848048acedb 188 SUPERFAMILY SSF101327 5 173 2.48E-44 T 11-10-2018 IPR036255 YgfB-like superfamily AVL55_15030 3d0c52ab60a06d207ee72848048acedb 188 Gene3D G3DSA:1.20.120.740 2 188 1.0E-55 T 11-10-2018 AVL55_15030 3d0c52ab60a06d207ee72848048acedb 188 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 12 153 1.4E-16 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 Gene3D G3DSA:1.10.10.10 1 53 8.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 SUPERFAMILY SSF46785 1 60 1.13E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 SMART SM00344 1 110 3.1E-42 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 SUPERFAMILY SSF54909 63 143 2.15E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.9E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.9E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.9E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 Gene3D G3DSA:3.30.70.920 54 137 1.7E-23 T 11-10-2018 AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 2.5E-19 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 47 7.0E-18 T 11-10-2018 AVL55_17670 2c3b81305f8ac563d95ef7ceb2ce7be9 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AVL55_04390 e4aca7aba9cf800cc711053435fb88fb 303 SMART SM00382 42 196 3.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_04390 e4aca7aba9cf800cc711053435fb88fb 303 SUPERFAMILY SSF52540 5 255 3.84E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04390 e4aca7aba9cf800cc711053435fb88fb 303 Gene3D G3DSA:3.40.50.300 28 186 1.5E-15 T 11-10-2018 AVL55_04390 e4aca7aba9cf800cc711053435fb88fb 303 Pfam PF13401 AAA domain 42 172 3.0E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_11710 fc73b400d3c70d20516c8de7f79b092f 177 Gene3D G3DSA:3.40.980.10 9 177 1.8E-50 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AVL55_11710 fc73b400d3c70d20516c8de7f79b092f 177 Pfam PF00994 Probable molybdopterin binding domain 20 161 5.3E-34 T 11-10-2018 IPR001453 MoaB/Mog domain AVL55_11710 fc73b400d3c70d20516c8de7f79b092f 177 SUPERFAMILY SSF53218 13 173 3.93E-46 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AVL55_11710 fc73b400d3c70d20516c8de7f79b092f 177 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 15 174 5.7E-82 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AVL55_11710 fc73b400d3c70d20516c8de7f79b092f 177 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 18 157 2.0E-35 T 11-10-2018 IPR001453 MoaB/Mog domain AVL55_11710 fc73b400d3c70d20516c8de7f79b092f 177 PIRSF PIRSF006443 3 172 1.9E-64 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AVL55_11710 fc73b400d3c70d20516c8de7f79b092f 177 SMART SM00852 20 164 6.5E-29 T 11-10-2018 IPR001453 MoaB/Mog domain AVL55_11710 fc73b400d3c70d20516c8de7f79b092f 177 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 78 91 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AVL55_06235 956528cc9954ba580fb9ccaddcddad7e 361 SUPERFAMILY SSF51395 2 360 7.94E-119 T 11-10-2018 AVL55_06235 956528cc9954ba580fb9ccaddcddad7e 361 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 339 4.3E-88 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AVL55_06235 956528cc9954ba580fb9ccaddcddad7e 361 Gene3D G3DSA:3.20.20.70 1 361 2.9E-135 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_02480 9c62d223cbc9c6f3c1ee9ea260eead9b 96 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 7 93 2.7E-37 T 11-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin AVL55_02480 9c62d223cbc9c6f3c1ee9ea260eead9b 96 Gene3D G3DSA:3.30.2310.20 6 96 2.1E-7 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AVL55_02480 9c62d223cbc9c6f3c1ee9ea260eead9b 96 SUPERFAMILY SSF143011 7 89 5.3E-7 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AVL55_13360 6455760737dd7f5256e6787379375e28 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.2E-70 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AVL55_13360 6455760737dd7f5256e6787379375e28 149 Pfam PF03477 ATP cone domain 50 136 1.5E-18 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AVL55_13360 6455760737dd7f5256e6787379375e28 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 87.137 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AVL55_01835 26cca7740056e41b5234e763f70b63bc 178 Pfam PF07700 Haem-NO-binding 3 159 6.3E-35 T 11-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AVL55_01835 26cca7740056e41b5234e763f70b63bc 178 SUPERFAMILY SSF111126 1 164 1.15E-36 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily AVL55_01835 26cca7740056e41b5234e763f70b63bc 178 Gene3D G3DSA:3.90.1520.10 1 177 5.3E-49 T 11-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AVL55_15605 24ad3926b3a167f46c8dcd76958b38ac 218 Pfam PF16036 Chalcone isomerase-like 79 216 1.4E-15 T 11-10-2018 IPR016087 Chalcone isomerase GO:0016872 AVL55_15605 24ad3926b3a167f46c8dcd76958b38ac 218 Gene3D G3DSA:3.50.70.10 52 200 2.6E-7 T 11-10-2018 IPR016088 Chalcone isomerase, 3-layer sandwich KEGG: 00941+5.5.1.6|MetaCyc: PWY-2002|MetaCyc: PWY-5059|MetaCyc: PWY-6325|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 AVL55_12590 78cbab1dcf5cd2c218b871acf036ca68 400 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 379 37.787 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 AVL55_12590 78cbab1dcf5cd2c218b871acf036ca68 400 Pfam PF11890 Domain of unknown function (DUF3410) 319 394 6.9E-10 T 11-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 AVL55_12590 78cbab1dcf5cd2c218b871acf036ca68 400 SUPERFAMILY SSF51735 92 265 2.38E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_12590 78cbab1dcf5cd2c218b871acf036ca68 400 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 286 4.0E-15 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AVL55_12590 78cbab1dcf5cd2c218b871acf036ca68 400 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 264 9.8E-29 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AVL55_12590 78cbab1dcf5cd2c218b871acf036ca68 400 Gene3D G3DSA:3.40.50.720 93 265 1.8E-95 T 11-10-2018 AVL55_12590 78cbab1dcf5cd2c218b871acf036ca68 400 Gene3D G3DSA:3.30.1370.170 307 398 1.4E-10 T 11-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 AVL55_12590 78cbab1dcf5cd2c218b871acf036ca68 400 SUPERFAMILY SSF52283 4 102 7.23E-17 T 11-10-2018 AVL55_12590 78cbab1dcf5cd2c218b871acf036ca68 400 Gene3D G3DSA:3.40.50.720 1 285 1.8E-95 T 11-10-2018 AVL55_00760 1f251b3bbe97e9b94f23c352792491e5 204 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 11 197 2.1E-75 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AVL55_00760 1f251b3bbe97e9b94f23c352792491e5 204 SUPERFAMILY SSF142695 9 175 7.32E-61 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AVL55_00760 1f251b3bbe97e9b94f23c352792491e5 204 Pfam PF00925 GTP cyclohydrolase II 12 173 6.7E-64 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AVL55_00760 1f251b3bbe97e9b94f23c352792491e5 204 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 6 200 41.857 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AVL55_00760 1f251b3bbe97e9b94f23c352792491e5 204 Gene3D G3DSA:3.40.50.10990 7 177 5.0E-69 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AVL55_01110 181d4f1edcd4955c3fe66c841d2b718d 185 PIRSF PIRSF016183 12 185 2.2E-58 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AVL55_01110 181d4f1edcd4955c3fe66c841d2b718d 185 Gene3D G3DSA:1.10.60.30 114 184 7.6E-24 T 11-10-2018 AVL55_01110 181d4f1edcd4955c3fe66c841d2b718d 185 Gene3D G3DSA:1.10.60.30 37 113 1.2E-19 T 11-10-2018 AVL55_01110 181d4f1edcd4955c3fe66c841d2b718d 185 SUPERFAMILY SSF158710 38 182 1.96E-45 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily AVL55_01110 181d4f1edcd4955c3fe66c841d2b718d 185 Pfam PF04751 Protein of unknown function (DUF615) 28 179 3.1E-50 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AVL55_19800 59c77467172e9910ef7940ffbcba759e 101 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 23 94 1.1E-29 T 11-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 AVL55_04670 1948dcf1d4f6f0eee93283adc6e02098 149 SUPERFAMILY SSF52218 1 147 1.42E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_04670 1948dcf1d4f6f0eee93283adc6e02098 149 Pfam PF00258 Flavodoxin 6 139 4.5E-23 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AVL55_04670 1948dcf1d4f6f0eee93283adc6e02098 149 Gene3D G3DSA:3.40.50.360 1 148 5.3E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_05705 27c16a5f7c8b4d091212d0dfe1e69b02 469 SUPERFAMILY SSF56349 211 449 1.35E-23 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_05705 27c16a5f7c8b4d091212d0dfe1e69b02 469 Gene3D G3DSA:1.10.443.10 244 454 1.7E-28 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_05705 27c16a5f7c8b4d091212d0dfe1e69b02 469 Pfam PF00589 Phage integrase family 254 445 2.0E-13 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 281 296 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 Gene3D G3DSA:1.10.10.60 466 520 1.2E-12 T 11-10-2018 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 408 417 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 Pfam PF00158 Sigma-54 interaction domain 195 361 3.7E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 Gene3D G3DSA:1.10.8.60 366 431 3.6E-19 T 11-10-2018 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 219 232 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 SUPERFAMILY SSF55781 9 159 7.2E-14 T 11-10-2018 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 SMART SM00382 215 358 5.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 SUPERFAMILY SSF46689 408 518 9.86E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 Gene3D G3DSA:3.40.50.300 177 365 9.4E-62 T 11-10-2018 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 Pfam PF01590 GAF domain 26 155 9.7E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 Gene3D G3DSA:3.30.450.40 6 173 9.6E-15 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 SMART SM00065 21 169 8.0E-5 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_14410 c6a72f565fc239029005a3a0bbd764d3 526 SUPERFAMILY SSF52540 195 433 8.14E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07945 d8ca235a88cf1102446e6c76d99840ab 299 SUPERFAMILY SSF51735 107 206 5.91E-5 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_07945 d8ca235a88cf1102446e6c76d99840ab 299 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 35 265 1.2E-83 T 11-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC AVL55_07945 d8ca235a88cf1102446e6c76d99840ab 299 Pfam PF13478 XdhC Rossmann domain 123 264 3.2E-34 T 11-10-2018 IPR027051 XdhC Rossmann domain AVL55_07945 d8ca235a88cf1102446e6c76d99840ab 299 Pfam PF02625 XdhC and CoxI family 28 88 3.8E-19 T 11-10-2018 IPR003777 XdhC- CoxI AVL55_07945 d8ca235a88cf1102446e6c76d99840ab 299 Gene3D G3DSA:3.40.50.720 121 268 5.3E-38 T 11-10-2018 AVL55_17975 39c22487edc59da8980da269440a09d2 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 138 2.0E-9 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AVL55_17975 39c22487edc59da8980da269440a09d2 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 2.0E-50 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AVL55_17975 39c22487edc59da8980da269440a09d2 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 28.555 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AVL55_17975 39c22487edc59da8980da269440a09d2 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AVL55_17975 39c22487edc59da8980da269440a09d2 149 SUPERFAMILY SSF109635 8 108 1.16E-35 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily AVL55_17975 39c22487edc59da8980da269440a09d2 149 SUPERFAMILY SSF57716 109 147 2.42E-9 T 11-10-2018 AVL55_17975 39c22487edc59da8980da269440a09d2 149 Gene3D G3DSA:1.20.120.910 19 148 7.4E-35 T 11-10-2018 AVL55_01550 7a8c99cadb049ef87db8e1d0e27b80b3 333 SUPERFAMILY SSF56752 2 328 1.15E-82 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AVL55_01550 7a8c99cadb049ef87db8e1d0e27b80b3 333 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 22 331 2.3E-101 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AVL55_01550 7a8c99cadb049ef87db8e1d0e27b80b3 333 Gene3D G3DSA:3.20.10.10 150 314 8.0E-96 T 11-10-2018 AVL55_01550 7a8c99cadb049ef87db8e1d0e27b80b3 333 PIRSF PIRSF006468 2 333 3.8E-100 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AVL55_01550 7a8c99cadb049ef87db8e1d0e27b80b3 333 Gene3D G3DSA:3.30.470.10 4 327 8.0E-96 T 11-10-2018 AVL55_01550 7a8c99cadb049ef87db8e1d0e27b80b3 333 Pfam PF01063 Amino-transferase class IV 48 285 1.8E-29 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AVL55_19795 d1451ad35104b75c9f59dacac345cb93 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.1E-117 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 AVL55_19795 d1451ad35104b75c9f59dacac345cb93 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.8E-35 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 AVL55_19795 d1451ad35104b75c9f59dacac345cb93 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 5.0E-44 T 11-10-2018 IPR013527 YicC-like, N-terminal AVL55_07430 42816b89e398ad12cccef927619d1100 862 Gene3D G3DSA:3.30.70.270 421 585 2.4E-8 T 11-10-2018 AVL55_07430 42816b89e398ad12cccef927619d1100 862 SMART SM00052 604 848 1.7E-84 T 11-10-2018 IPR001633 EAL domain AVL55_07430 42816b89e398ad12cccef927619d1100 862 SUPERFAMILY SSF55785 281 409 1.1E-11 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_07430 42816b89e398ad12cccef927619d1100 862 Pfam PF00990 Diguanylate cyclase, GGDEF domain 422 555 3.6E-5 T 11-10-2018 IPR000160 GGDEF domain AVL55_07430 42816b89e398ad12cccef927619d1100 862 Pfam PF00563 EAL domain 611 843 1.3E-63 T 11-10-2018 IPR001633 EAL domain AVL55_07430 42816b89e398ad12cccef927619d1100 862 Pfam PF13426 PAS domain 305 409 2.3E-8 T 11-10-2018 IPR000014 PAS domain AVL55_07430 42816b89e398ad12cccef927619d1100 862 Gene3D G3DSA:3.20.20.450 607 861 4.1E-78 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_07430 42816b89e398ad12cccef927619d1100 862 SUPERFAMILY SSF141868 611 855 9.29E-74 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_07430 42816b89e398ad12cccef927619d1100 862 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 411 5.1E-12 T 11-10-2018 IPR000014 PAS domain AVL55_07430 42816b89e398ad12cccef927619d1100 862 SMART SM00091 295 364 0.0022 T 11-10-2018 IPR000014 PAS domain AVL55_07430 42816b89e398ad12cccef927619d1100 862 SMART SM00091 164 231 3.4 T 11-10-2018 IPR000014 PAS domain AVL55_07430 42816b89e398ad12cccef927619d1100 862 Gene3D G3DSA:3.30.450.20 298 409 1.8E-14 T 11-10-2018 AVL55_07430 42816b89e398ad12cccef927619d1100 862 Gene3D G3DSA:3.30.450.20 157 279 4.1E-6 T 11-10-2018 AVL55_07430 42816b89e398ad12cccef927619d1100 862 SUPERFAMILY SSF55073 428 523 1.65E-5 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 SUPERFAMILY SSF54534 173 275 5.49E-26 T 11-10-2018 AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 SUPERFAMILY SSF54534 282 383 2.42E-31 T 11-10-2018 AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 Pfam PF00639 PPIC-type PPIASE domain 178 271 5.9E-19 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 Pfam PF00639 PPIC-type PPIASE domain 288 380 5.5E-24 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 Gene3D G3DSA:3.10.50.40 172 274 7.8E-70 T 11-10-2018 AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 Hamap MF_01183 Chaperone SurA [surA]. 4 427 34.978 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 Gene3D G3DSA:3.10.50.40 281 380 1.4E-34 T 11-10-2018 AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 Pfam PF09312 SurA N-terminal domain 25 142 3.5E-38 T 11-10-2018 IPR015391 SurA N-terminal AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 SUPERFAMILY SSF109998 25 201 7.3E-39 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 Gene3D G3DSA:1.10.4030.30 26 277 7.8E-70 T 11-10-2018 AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 320 341 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AVL55_03335 9e378466d1ee2c1766a1d19f411c4fab 427 Gene3D G3DSA:1.10.4030.30 381 427 5.0E-7 T 11-10-2018 AVL55_09620 6bd5f7f7a7aec6409e0a869c62e9cc6e 955 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 938 955 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AVL55_09620 6bd5f7f7a7aec6409e0a869c62e9cc6e 955 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 162 5.4E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_09620 6bd5f7f7a7aec6409e0a869c62e9cc6e 955 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 40 955 1.8E-153 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AVL55_09620 6bd5f7f7a7aec6409e0a869c62e9cc6e 955 SUPERFAMILY SSF56935 24 955 3.63E-74 T 11-10-2018 AVL55_09620 6bd5f7f7a7aec6409e0a869c62e9cc6e 955 Gene3D G3DSA:2.170.130.10 43 166 1.6E-14 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 Gene3D G3DSA:3.30.540.10 1 160 1.4E-48 T 11-10-2018 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 SUPERFAMILY SSF56655 17 296 6.48E-85 T 11-10-2018 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 298 34.532 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 PIRSF PIRSF500210 1 299 3.6E-97 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 113 136 9.5E-37 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 170 197 9.5E-37 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 35 61 9.5E-37 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 144 167 9.5E-37 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 272 297 9.5E-37 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 Gene3D G3DSA:3.40.190.80 161 296 3.1E-43 T 11-10-2018 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 17 158 3.2E-43 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16340 4f3dc988f6fcce2fedc72cd0a8c29ab6 300 PIRSF PIRSF000904 1 299 9.0E-95 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_18745 929c5cf62490e2b93ed4a9175b548e27 705 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 688 705 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AVL55_18745 929c5cf62490e2b93ed4a9175b548e27 705 Gene3D G3DSA:2.170.130.10 40 125 2.2E-5 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_18745 929c5cf62490e2b93ed4a9175b548e27 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 146 8.8E-6 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_18745 929c5cf62490e2b93ed4a9175b548e27 705 Pfam PF00593 TonB dependent receptor 208 704 1.1E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_18745 929c5cf62490e2b93ed4a9175b548e27 705 Gene3D G3DSA:2.40.170.20 159 705 9.6E-55 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_18745 929c5cf62490e2b93ed4a9175b548e27 705 SUPERFAMILY SSF56935 28 705 2.2E-63 T 11-10-2018 AVL55_12605 8ebd0da60ad117a32eb04b1884c1e2d1 319 SUPERFAMILY SSF53474 50 314 1.85E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_12605 8ebd0da60ad117a32eb04b1884c1e2d1 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 111 3.6E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_12605 8ebd0da60ad117a32eb04b1884c1e2d1 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 141 154 3.6E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_12605 8ebd0da60ad117a32eb04b1884c1e2d1 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 155 168 3.6E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_12605 8ebd0da60ad117a32eb04b1884c1e2d1 319 Gene3D G3DSA:3.40.50.1820 52 318 1.0E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_12605 8ebd0da60ad117a32eb04b1884c1e2d1 319 Pfam PF00561 alpha/beta hydrolase fold 82 182 1.1E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_16450 271cd47fb2a21e897bf6e2195a6aabe4 291 Gene3D G3DSA:3.40.50.720 1 161 8.0E-57 T 11-10-2018 AVL55_16450 271cd47fb2a21e897bf6e2195a6aabe4 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AVL55_16450 271cd47fb2a21e897bf6e2195a6aabe4 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 289 2.1E-36 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AVL55_16450 271cd47fb2a21e897bf6e2195a6aabe4 291 SUPERFAMILY SSF51735 3 161 2.18E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_16450 271cd47fb2a21e897bf6e2195a6aabe4 291 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 289 1.5E-123 T 11-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AVL55_16450 271cd47fb2a21e897bf6e2195a6aabe4 291 Gene3D G3DSA:1.10.1040.10 163 291 2.3E-40 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AVL55_16450 271cd47fb2a21e897bf6e2195a6aabe4 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 160 3.4E-51 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AVL55_16450 271cd47fb2a21e897bf6e2195a6aabe4 291 SUPERFAMILY SSF48179 161 290 8.62E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_16450 271cd47fb2a21e897bf6e2195a6aabe4 291 PIRSF PIRSF000103 1 291 2.3E-80 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AVL55_02685 3db3de8a078f450c38916c12cc41da75 449 SUPERFAMILY SSF55874 292 418 3.7E-11 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02685 3db3de8a078f450c38916c12cc41da75 449 SUPERFAMILY SSF47384 212 288 7.26E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_02685 3db3de8a078f450c38916c12cc41da75 449 Gene3D G3DSA:3.30.565.10 288 430 1.0E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02685 3db3de8a078f450c38916c12cc41da75 449 SMART SM00388 223 290 2.8E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_02685 3db3de8a078f450c38916c12cc41da75 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 289 5.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_02685 3db3de8a078f450c38916c12cc41da75 449 Gene3D G3DSA:1.10.287.130 174 287 7.7E-18 T 11-10-2018 AVL55_17590 468e1a6244a34721b1ce479fe00fc105 572 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 44 143 1.5E-29 T 11-10-2018 IPR032093 Phospholipase D, N-terminal AVL55_17590 468e1a6244a34721b1ce479fe00fc105 572 Gene3D G3DSA:2.60.40.380 35 145 2.3E-33 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AVL55_17590 468e1a6244a34721b1ce479fe00fc105 572 SUPERFAMILY SSF56300 147 553 9.4E-31 T 11-10-2018 AVL55_17590 468e1a6244a34721b1ce479fe00fc105 572 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 26 0.0012 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AVL55_17590 468e1a6244a34721b1ce479fe00fc105 572 Pfam PF09423 PhoD-like phosphatase 154 549 6.8E-116 T 11-10-2018 IPR018946 Alkaline phosphatase D-related AVL55_07435 0b751a72a62bee9cac6dcf09ea2b05e1 634 SUPERFAMILY SSF56801 5 614 9.03E-157 T 11-10-2018 AVL55_07435 0b751a72a62bee9cac6dcf09ea2b05e1 634 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 588 3.6E-24 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AVL55_07435 0b751a72a62bee9cac6dcf09ea2b05e1 634 Gene3D G3DSA:3.40.50.12780 36 493 8.3E-102 T 11-10-2018 AVL55_07435 0b751a72a62bee9cac6dcf09ea2b05e1 634 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 56 1.5E-13 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AVL55_07435 0b751a72a62bee9cac6dcf09ea2b05e1 634 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 11-10-2018 IPR020845 AMP-binding, conserved site AVL55_07435 0b751a72a62bee9cac6dcf09ea2b05e1 634 Gene3D G3DSA:3.30.300.30 496 625 3.6E-26 T 11-10-2018 AVL55_07435 0b751a72a62bee9cac6dcf09ea2b05e1 634 Pfam PF00501 AMP-binding enzyme 64 500 6.0E-83 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AVL55_15420 bd93aed57947081c23a1d3c4061d3200 273 Gene3D G3DSA:1.10.3730.10 166 273 9.8E-32 T 11-10-2018 AVL55_15420 bd93aed57947081c23a1d3c4061d3200 273 SUPERFAMILY SSF48179 164 272 7.65E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_15420 bd93aed57947081c23a1d3c4061d3200 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 1.5E-28 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AVL55_15420 bd93aed57947081c23a1d3c4061d3200 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.453 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AVL55_15420 bd93aed57947081c23a1d3c4061d3200 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 5.0E-73 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AVL55_15420 bd93aed57947081c23a1d3c4061d3200 273 SUPERFAMILY SSF51735 4 162 7.62E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_15420 bd93aed57947081c23a1d3c4061d3200 273 Gene3D G3DSA:3.40.50.720 1 165 7.5E-50 T 11-10-2018 AVL55_15420 bd93aed57947081c23a1d3c4061d3200 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 2.8E-21 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AVL55_15420 bd93aed57947081c23a1d3c4061d3200 273 PIRSF PIRSF000193 3 272 7.7E-73 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AVL55_14955 1bbf8e9e5b0b38cfcd4ec22941f1d604 331 Gene3D G3DSA:2.40.160.10 117 325 2.1E-6 T 11-10-2018 IPR023614 Porin domain superfamily AVL55_14955 1bbf8e9e5b0b38cfcd4ec22941f1d604 331 SUPERFAMILY SSF56935 34 320 2.93E-24 T 11-10-2018 AVL55_14955 1bbf8e9e5b0b38cfcd4ec22941f1d604 331 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 79 314 5.0E-11 T 11-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 AVL55_15005 f45ecd2965fc2dde70b54de61562d1eb 291 SUPERFAMILY SSF103481 48 143 1.11E-5 T 11-10-2018 AVL55_15005 f45ecd2965fc2dde70b54de61562d1eb 291 SUPERFAMILY SSF103481 213 290 3.4E-5 T 11-10-2018 AVL55_15400 f5ba9fb9734d15371bacd421df30e2b3 105 Gene3D G3DSA:4.10.1060.10 69 105 3.0E-5 T 11-10-2018 AVL55_15400 f5ba9fb9734d15371bacd421df30e2b3 105 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 82 101 - T 11-10-2018 IPR001876 Zinc finger, RanBP2-type AVL55_15400 f5ba9fb9734d15371bacd421df30e2b3 105 SUPERFAMILY SSF90209 73 105 1.12E-5 T 11-10-2018 IPR036443 Zinc finger, RanBP2-type superfamily AVL55_15400 f5ba9fb9734d15371bacd421df30e2b3 105 Pfam PF09413 Putative prokaryotic signal transducing protein 2 67 6.1E-12 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 3.2E-28 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 3.2E-28 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 3.2E-28 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 3.2E-28 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 3.2E-28 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 3.2E-28 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 SUPERFAMILY SSF55008 18 87 2.09E-17 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 88 4.2E-36 T 11-10-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 Pfam PF00403 Heavy-metal-associated domain 25 85 2.5E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 Gene3D G3DSA:3.30.70.100 20 88 7.2E-17 T 11-10-2018 AVL55_12315 4734758e4ac09dd26796c7134bd23321 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AVL55_12925 de22cf877ce249470d925ff320ee5c98 639 SUPERFAMILY SSF52540 19 602 9.76E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_12925 de22cf877ce249470d925ff320ee5c98 639 SMART SM00491 477 606 2.8E-42 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AVL55_12925 de22cf877ce249470d925ff320ee5c98 639 Gene3D G3DSA:3.40.50.300 443 637 1.4E-37 T 11-10-2018 AVL55_12925 de22cf877ce249470d925ff320ee5c98 639 SMART SM00488 21 270 0.0034 T 11-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 AVL55_12925 de22cf877ce249470d925ff320ee5c98 639 Pfam PF13307 Helicase C-terminal domain 461 618 1.2E-33 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AVL55_12925 de22cf877ce249470d925ff320ee5c98 639 SUPERFAMILY SSF52540 190 594 1.13E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_12925 de22cf877ce249470d925ff320ee5c98 639 SMART SM00487 19 323 5.4E-5 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_12925 de22cf877ce249470d925ff320ee5c98 639 Gene3D G3DSA:3.40.50.300 22 281 2.5E-48 T 11-10-2018 AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 SMART SM00345 12 71 5.8E-24 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 6.1E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 Pfam PF07840 FadR C-terminal domain 72 234 6.4E-65 T 11-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 Gene3D G3DSA:1.20.120.530 80 236 3.9E-35 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 SUPERFAMILY SSF48008 79 230 3.27E-53 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 Gene3D G3DSA:1.10.10.10 1 79 3.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 SUPERFAMILY SSF46785 11 87 6.08E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 236 146.617 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AVL55_12855 55309ae432afd6266d6c46c22438ecc1 236 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 2.3E-112 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AVL55_16975 8b467d42e24ee4f19c09850c7faef499 223 SUPERFAMILY SSF51206 12 138 1.14E-25 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AVL55_16975 8b467d42e24ee4f19c09850c7faef499 223 Gene3D G3DSA:2.60.120.10 8 130 2.3E-22 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_16975 8b467d42e24ee4f19c09850c7faef499 223 Pfam PF13545 Crp-like helix-turn-helix domain 148 211 4.1E-7 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AVL55_16975 8b467d42e24ee4f19c09850c7faef499 223 SMART SM00100 7 129 9.0E-7 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AVL55_16975 8b467d42e24ee4f19c09850c7faef499 223 Gene3D G3DSA:1.10.10.10 141 217 9.4E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16975 8b467d42e24ee4f19c09850c7faef499 223 Pfam PF00027 Cyclic nucleotide-binding domain 27 114 3.3E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AVL55_16975 8b467d42e24ee4f19c09850c7faef499 223 SUPERFAMILY SSF46785 148 214 5.11E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_14150 3403233c698f54e17789685e75b75aa9 318 TIGRFAM TIGR03018 pepcterm_TyrKin: exopolysaccharide/PEP-CTERM locus tyrosine autokinase 89 296 9.0E-79 T 11-10-2018 AVL55_14150 3403233c698f54e17789685e75b75aa9 318 Gene3D G3DSA:3.40.50.300 7 317 4.8E-51 T 11-10-2018 AVL55_14150 3403233c698f54e17789685e75b75aa9 318 Pfam PF13614 AAA domain 126 269 2.9E-11 T 11-10-2018 IPR025669 AAA domain AVL55_14150 3403233c698f54e17789685e75b75aa9 318 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 125 312 4.1E-33 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AVL55_14150 3403233c698f54e17789685e75b75aa9 318 SUPERFAMILY SSF52540 124 302 7.98E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 SMART SM00842 10 196 3.0E-99 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 SUPERFAMILY SSF53067 8 221 1.78E-57 T 11-10-2018 AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 Gene3D G3DSA:3.30.420.40 13 372 9.8E-120 T 11-10-2018 AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 7.3E-154 T 11-10-2018 IPR020823 Cell division protein FtsA AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 8.4E-32 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 409 29.75 T 11-10-2018 IPR020823 Cell division protein FtsA AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 Pfam PF14450 Cell division protein FtsA 207 374 9.4E-24 T 11-10-2018 AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 Gene3D G3DSA:3.90.640.10 235 300 9.8E-120 T 11-10-2018 AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 Pfam PF14450 Cell division protein FtsA 11 187 8.3E-8 T 11-10-2018 AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 PIRSF PIRSF003101 1 409 2.7E-153 T 11-10-2018 IPR020823 Cell division protein FtsA AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 SUPERFAMILY SSF53067 198 377 2.79E-47 T 11-10-2018 AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 Gene3D G3DSA:3.30.420.40 197 352 9.8E-120 T 11-10-2018 AVL55_15215 78fcd36ffe067801119ac692e01f9437 409 Gene3D G3DSA:3.30.1490.110 87 169 9.8E-120 T 11-10-2018 AVL55_01375 b77dbfb36a7872bc5c203cc45eb9a2f6 278 Pfam PF00551 Formyl transferase 71 156 2.7E-13 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_01375 b77dbfb36a7872bc5c203cc45eb9a2f6 278 SUPERFAMILY SSF53328 1 185 1.83E-26 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_01375 b77dbfb36a7872bc5c203cc45eb9a2f6 278 Gene3D G3DSA:3.40.50.12230 1 268 2.2E-35 T 11-10-2018 AVL55_06025 c6964889ad946ffd612019a480e83459 272 Pfam PF03837 RecT family 38 193 4.4E-23 T 11-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 AVL55_06025 c6964889ad946ffd612019a480e83459 272 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 15 189 5.0E-25 T 11-10-2018 IPR010183 Bacteriophage lambda, Bet AVL55_18345 755f0416538292b9004aefcbea30bc31 272 Gene3D G3DSA:3.30.70.100 173 264 2.0E-23 T 11-10-2018 AVL55_18345 755f0416538292b9004aefcbea30bc31 272 SUPERFAMILY SSF82689 174 271 6.41E-28 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AVL55_18345 755f0416538292b9004aefcbea30bc31 272 Gene3D G3DSA:2.30.30.60 123 171 2.8E-10 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_18345 755f0416538292b9004aefcbea30bc31 272 Pfam PF05552 Conserved TM helix 13 58 3.5E-11 T 11-10-2018 IPR008910 Conserved TM helix AVL55_18345 755f0416538292b9004aefcbea30bc31 272 SUPERFAMILY SSF82861 22 106 2.75E-16 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AVL55_18345 755f0416538292b9004aefcbea30bc31 272 Pfam PF00924 Mechanosensitive ion channel 66 260 2.7E-40 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_18345 755f0416538292b9004aefcbea30bc31 272 SUPERFAMILY SSF50182 108 171 4.25E-13 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_11030 e4a5f5e53c7f61da2bd1d8d041a2011c 361 Gene3D G3DSA:3.40.640.10 16 258 8.9E-86 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_11030 e4a5f5e53c7f61da2bd1d8d041a2011c 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AVL55_11030 e4a5f5e53c7f61da2bd1d8d041a2011c 361 Gene3D G3DSA:3.90.1150.10 259 361 5.7E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_11030 e4a5f5e53c7f61da2bd1d8d041a2011c 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 6.5E-152 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AVL55_11030 e4a5f5e53c7f61da2bd1d8d041a2011c 361 PIRSF PIRSF000525 1 361 4.2E-147 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AVL55_11030 e4a5f5e53c7f61da2bd1d8d041a2011c 361 Pfam PF00266 Aminotransferase class-V 4 348 3.0E-55 T 11-10-2018 IPR000192 Aminotransferase class V domain AVL55_11030 e4a5f5e53c7f61da2bd1d8d041a2011c 361 SUPERFAMILY SSF53383 1 358 2.49E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_11030 e4a5f5e53c7f61da2bd1d8d041a2011c 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 49.806 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AVL55_08645 3df171d21d739958302123ee1554e030 242 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 146 198 2.2E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_08645 3df171d21d739958302123ee1554e030 242 Gene3D G3DSA:3.40.50.1000 26 225 7.7E-52 T 11-10-2018 IPR023214 HAD superfamily AVL55_08645 3df171d21d739958302123ee1554e030 242 SUPERFAMILY SSF56784 18 234 6.83E-57 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_08645 3df171d21d739958302123ee1554e030 242 Gene3D G3DSA:1.10.150.240 38 104 7.7E-52 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AVL55_08645 3df171d21d739958302123ee1554e030 242 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 204 2.5E-33 T 11-10-2018 AVL55_03735 599059783bbeb425d6db73297c96b6f9 240 SUPERFAMILY SSF75625 1 236 3.14E-78 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_03735 599059783bbeb425d6db73297c96b6f9 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.428 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_03735 599059783bbeb425d6db73297c96b6f9 240 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 236 1.1E-62 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_03735 599059783bbeb425d6db73297c96b6f9 240 Gene3D G3DSA:3.30.70.980 83 235 3.0E-46 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_03735 599059783bbeb425d6db73297c96b6f9 240 Gene3D G3DSA:1.10.10.200 17 78 9.8E-19 T 11-10-2018 IPR017856 Integrase-like, N-terminal AVL55_03735 599059783bbeb425d6db73297c96b6f9 240 Gene3D G3DSA:3.30.70.980 127 204 3.0E-46 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_03735 599059783bbeb425d6db73297c96b6f9 240 Pfam PF01709 Transcriptional regulator 5 236 9.7E-77 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_06165 b8dec0870e722e291230a32ebbfe01e4 222 Pfam PF13599 Pentapeptide repeats (9 copies) 129 196 1.1E-9 T 11-10-2018 IPR001646 Pentapeptide repeat AVL55_06165 b8dec0870e722e291230a32ebbfe01e4 222 Pfam PF00805 Pentapeptide repeats (8 copies) 47 83 7.6E-12 T 11-10-2018 IPR001646 Pentapeptide repeat AVL55_06165 b8dec0870e722e291230a32ebbfe01e4 222 SUPERFAMILY SSF141571 45 210 5.79E-39 T 11-10-2018 AVL55_06165 b8dec0870e722e291230a32ebbfe01e4 222 Gene3D G3DSA:2.160.20.80 36 222 4.1E-44 T 11-10-2018 AVL55_12510 df2801ca3a2c030b8306fb508dac913a 331 Gene3D G3DSA:3.90.180.10 21 327 1.3E-118 T 11-10-2018 AVL55_12510 df2801ca3a2c030b8306fb508dac913a 331 SMART SM00829 12 327 4.3E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_12510 df2801ca3a2c030b8306fb508dac913a 331 Pfam PF00107 Zinc-binding dehydrogenase 162 271 5.2E-16 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_12510 df2801ca3a2c030b8306fb508dac913a 331 SUPERFAMILY SSF50129 5 149 8.22E-40 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_12510 df2801ca3a2c030b8306fb508dac913a 331 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 329 1.6E-138 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI AVL55_12510 df2801ca3a2c030b8306fb508dac913a 331 SUPERFAMILY SSF51735 119 296 3.24E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_12510 df2801ca3a2c030b8306fb508dac913a 331 Gene3D G3DSA:3.40.50.720 129 297 1.3E-118 T 11-10-2018 AVL55_12510 df2801ca3a2c030b8306fb508dac913a 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 2.2E-5 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AVL55_09785 df992f21afdd8af8222813563058e269 291 Gene3D G3DSA:3.30.479.10 153 290 5.7E-8 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AVL55_09785 df992f21afdd8af8222813563058e269 291 Gene3D G3DSA:3.30.479.10 11 152 9.7E-22 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AVL55_09785 df992f21afdd8af8222813563058e269 291 SUPERFAMILY SSF55620 1 156 4.78E-31 T 11-10-2018 AVL55_09785 df992f21afdd8af8222813563058e269 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 151 289 2.3E-7 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AVL55_09785 df992f21afdd8af8222813563058e269 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 131 1.0E-7 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AVL55_09785 df992f21afdd8af8222813563058e269 291 SUPERFAMILY SSF55620 155 288 4.84E-23 T 11-10-2018 AVL55_07755 f57e7faa651a4a3d90cbfda8ce29a724 136 SUPERFAMILY SSF54197 7 133 8.93E-34 T 11-10-2018 IPR036265 HIT-like superfamily AVL55_07755 f57e7faa651a4a3d90cbfda8ce29a724 136 Pfam PF01230 HIT domain 9 98 1.0E-14 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AVL55_07755 f57e7faa651a4a3d90cbfda8ce29a724 136 Gene3D G3DSA:3.30.428.10 1 135 2.8E-40 T 11-10-2018 IPR036265 HIT-like superfamily AVL55_07755 f57e7faa651a4a3d90cbfda8ce29a724 136 PIRSF PIRSF000714 1 136 2.4E-51 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type AVL55_09025 457a08030cc054e47da6374cd34d12df 656 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 495 8.7E-192 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AVL55_09025 457a08030cc054e47da6374cd34d12df 656 ProSitePatterns PS01303 BCCT family of transporters signature. 314 323 - T 11-10-2018 IPR018093 BCCT transporter, conserved site AVL55_09025 457a08030cc054e47da6374cd34d12df 656 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 495 9.7E-160 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AVL55_19365 b868b54bc6065e507381a94797e5dbe2 208 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 23 1.4E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19365 b868b54bc6065e507381a94797e5dbe2 208 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 3 202 9.7E-55 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AVL55_19365 b868b54bc6065e507381a94797e5dbe2 208 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19365 b868b54bc6065e507381a94797e5dbe2 208 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 1.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19365 b868b54bc6065e507381a94797e5dbe2 208 Pfam PF11612 Type II secretion system (T2SS), protein J 55 200 1.9E-37 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AVL55_19365 b868b54bc6065e507381a94797e5dbe2 208 SUPERFAMILY SSF54523 36 204 1.33E-42 T 11-10-2018 AVL55_19365 b868b54bc6065e507381a94797e5dbe2 208 Gene3D G3DSA:3.10.610.10 35 145 2.8E-36 T 11-10-2018 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 698 30.324 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 Pfam PF01170 Putative RNA methylase family UPF0020 163 372 8.0E-46 T 11-10-2018 IPR000241 Putative RNA methylase domain AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 Gene3D G3DSA:3.40.50.150 170 369 3.1E-119 T 11-10-2018 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 Gene3D G3DSA:3.40.50.150 482 698 2.2E-75 T 11-10-2018 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 468 650 2.6E-24 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 Gene3D G3DSA:3.30.2130.30 6 254 3.1E-119 T 11-10-2018 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 Pfam PF02926 THUMP domain 37 154 9.1E-11 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 SUPERFAMILY SSF53335 141 378 2.94E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 Gene3D G3DSA:3.30.750.80 390 481 1.3E-34 T 11-10-2018 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 SMART SM00981 57 155 3.7E-15 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 PIRSF PIRSF037618 1 698 1.5E-280 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 SUPERFAMILY SSF53335 393 694 4.18E-73 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_10130 22a2fdb60c31170fa822a0630af721f9 698 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AVL55_11370 d7ef71e8698fdbf7f0264b5ec7c504c3 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 424 4.4E-96 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_11370 d7ef71e8698fdbf7f0264b5ec7c504c3 457 PIRSF PIRSF006603 3 454 3.3E-60 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_11370 d7ef71e8698fdbf7f0264b5ec7c504c3 457 Pfam PF01554 MatE 19 178 7.9E-30 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_11370 d7ef71e8698fdbf7f0264b5ec7c504c3 457 Pfam PF01554 MatE 245 406 3.1E-33 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 SMART SM00382 188 327 2.1E-26 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 Pfam PF01434 Peptidase family M41 386 595 2.2E-82 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 SUPERFAMILY SSF52540 148 395 1.6E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 Gene3D G3DSA:2.40.50.920 26 103 9.7E-21 T 11-10-2018 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 Gene3D G3DSA:3.40.50.300 146 324 2.7E-70 T 11-10-2018 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 Pfam PF06480 FtsH Extracellular 8 97 1.8E-11 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 Gene3D G3DSA:1.10.8.60 326 400 1.8E-28 T 11-10-2018 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 SUPERFAMILY SSF140990 406 607 8.37E-75 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 611 37.502 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 8.8E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 Gene3D G3DSA:1.20.58.760 401 604 2.0E-73 T 11-10-2018 AVL55_09285 cbb6a31fc207fd2d5da501f3b69256e1 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 597 2.9E-244 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AVL55_15770 abad0a065b69546b750cdec1317cb953 184 Pfam PF03703 Bacterial PH domain 100 175 9.5E-16 T 11-10-2018 IPR005182 Domain of unknown function DUF304 AVL55_20090 23117d3369b99cf454abb569d9e2a4e8 44 Pfam PF00468 Ribosomal protein L34 1 44 1.0E-25 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_20090 23117d3369b99cf454abb569d9e2a4e8 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.783 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_20090 23117d3369b99cf454abb569d9e2a4e8 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 5.0E-7 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_20090 23117d3369b99cf454abb569d9e2a4e8 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.4E-27 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_20090 23117d3369b99cf454abb569d9e2a4e8 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_03235 b0cdd329aae2379dd428a35271841711 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 3.3E-33 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AVL55_03235 b0cdd329aae2379dd428a35271841711 135 Gene3D G3DSA:3.30.420.270 62 130 7.8E-10 T 11-10-2018 AVL55_10815 53a4d4322f357c50c9449943ea47968e 241 SUPERFAMILY SSF52467 7 235 2.0E-73 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AVL55_10815 53a4d4322f357c50c9449943ea47968e 241 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 8 237 54.432 T 11-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AVL55_10815 53a4d4322f357c50c9449943ea47968e 241 Gene3D G3DSA:3.40.50.1220 10 229 2.5E-81 T 11-10-2018 AVL55_10815 53a4d4322f357c50c9449943ea47968e 241 Pfam PF02146 Sir2 family 15 187 6.9E-49 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 AVL55_10815 53a4d4322f357c50c9449943ea47968e 241 Gene3D G3DSA:3.30.1600.10 24 159 2.5E-81 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AVL55_05710 5a78325c89998ea49da1a921e96413e2 89 Gene3D G3DSA:2.30.40.20 12 64 5.8E-17 T 11-10-2018 AVL55_05710 5a78325c89998ea49da1a921e96413e2 89 Pfam PF00817 impB/mucB/samB family 7 64 3.1E-13 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_05710 5a78325c89998ea49da1a921e96413e2 89 SUPERFAMILY SSF56672 3 80 4.71E-22 T 11-10-2018 AVL55_17280 00fd5a7e8249c2b922097c91536d095b 289 SUPERFAMILY SSF51735 1 287 4.96E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_17280 00fd5a7e8249c2b922097c91536d095b 289 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 286 2.6E-92 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AVL55_17280 00fd5a7e8249c2b922097c91536d095b 289 Pfam PF04321 RmlD substrate binding domain 1 287 9.7E-94 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AVL55_17280 00fd5a7e8249c2b922097c91536d095b 289 Gene3D G3DSA:3.40.50.720 3 274 3.1E-96 T 11-10-2018 AVL55_17280 00fd5a7e8249c2b922097c91536d095b 289 Gene3D G3DSA:3.90.25.10 160 281 3.1E-96 T 11-10-2018 AVL55_16080 88eba48f9738d6916a3784b1e4878628 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 353 2.4E-69 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AVL55_16080 88eba48f9738d6916a3784b1e4878628 353 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 7.0E-136 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AVL55_18295 79b505e0eed6835449c8700358cb858a 207 SUPERFAMILY SSF89562 11 168 9.42E-42 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AVL55_18295 79b505e0eed6835449c8700358cb858a 207 Gene3D G3DSA:3.50.30.100 6 183 1.2E-49 T 11-10-2018 AVL55_18295 79b505e0eed6835449c8700358cb858a 207 Pfam PF03737 Aldolase/RraA 14 160 2.7E-39 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AVL55_01850 dadba2da6e3fb647dc873edd673fc49f 489 Pfam PF00171 Aldehyde dehydrogenase family 11 462 2.5E-123 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AVL55_01850 dadba2da6e3fb647dc873edd673fc49f 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AVL55_01850 dadba2da6e3fb647dc873edd673fc49f 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AVL55_01850 dadba2da6e3fb647dc873edd673fc49f 489 Gene3D G3DSA:3.40.309.10 249 440 7.5E-143 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AVL55_01850 dadba2da6e3fb647dc873edd673fc49f 489 SUPERFAMILY SSF53720 3 458 2.36E-125 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_01850 dadba2da6e3fb647dc873edd673fc49f 489 Gene3D G3DSA:3.40.605.10 9 452 7.5E-143 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_01850 dadba2da6e3fb647dc873edd673fc49f 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 3 489 57.662 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AVL55_01850 dadba2da6e3fb647dc873edd673fc49f 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 488 3.6E-251 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AVL55_13110 a966972e2e908414401aec2bbf32a8ce 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 4.5E-35 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AVL55_13110 a966972e2e908414401aec2bbf32a8ce 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.312 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AVL55_13110 a966972e2e908414401aec2bbf32a8ce 108 SUPERFAMILY SSF82607 10 102 1.44E-36 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AVL55_13110 a966972e2e908414401aec2bbf32a8ce 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 1.1E-35 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AVL55_13110 a966972e2e908414401aec2bbf32a8ce 108 PIRSF PIRSF004555 3 108 2.5E-39 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AVL55_13110 a966972e2e908414401aec2bbf32a8ce 108 Gene3D G3DSA:3.30.1310.10 1 108 1.9E-46 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AVL55_01355 172f8b712a1d76e077a051c65d7d2c98 117 SUPERFAMILY SSF81296 27 117 7.0E-17 T 11-10-2018 IPR014756 Immunoglobulin E-set AVL55_01355 172f8b712a1d76e077a051c65d7d2c98 117 Gene3D G3DSA:2.60.40.1220 22 117 1.0E-14 T 11-10-2018 AVL55_01355 172f8b712a1d76e077a051c65d7d2c98 117 Pfam PF04234 CopC domain 27 116 1.4E-14 T 11-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AVL55_02485 80f68e0214f06a5dcac5d0e59ba48351 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 288 2.5E-11 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AVL55_02485 80f68e0214f06a5dcac5d0e59ba48351 341 Pfam PF01548 Transposase 6 144 3.8E-12 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AVL55_12125 d8f569b016f38178c385838a8b06b0c9 317 TIGRFAM TIGR00749 glk: glucokinase 6 308 2.6E-93 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AVL55_12125 d8f569b016f38178c385838a8b06b0c9 317 Pfam PF02685 Glucokinase 6 313 9.2E-109 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AVL55_12125 d8f569b016f38178c385838a8b06b0c9 317 SUPERFAMILY SSF53067 6 313 1.68E-61 T 11-10-2018 AVL55_12125 d8f569b016f38178c385838a8b06b0c9 317 Gene3D G3DSA:3.30.420.40 6 308 1.5E-100 T 11-10-2018 AVL55_12125 d8f569b016f38178c385838a8b06b0c9 317 Gene3D G3DSA:3.40.367.20 98 297 1.5E-100 T 11-10-2018 AVL55_12125 d8f569b016f38178c385838a8b06b0c9 317 Hamap MF_00524 Glucokinase [glk]. 3 314 32.677 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 SUPERFAMILY SSF53623 101 318 5.63E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 Pfam PF08245 Mur ligase middle domain 120 300 2.1E-31 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 Gene3D G3DSA:3.40.50.720 16 103 6.9E-31 T 11-10-2018 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 472 42.982 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 Pfam PF01225 Mur ligase family, catalytic domain 18 114 4.9E-23 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 410 3.8E-20 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 Gene3D G3DSA:3.40.1190.10 104 316 4.8E-82 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 17 464 3.3E-175 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 Gene3D G3DSA:3.90.190.20 317 479 8.7E-49 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 SUPERFAMILY SSF51984 16 102 9.68E-28 T 11-10-2018 AVL55_15230 c5ef50e4739ec7f9ba2c176350036320 481 SUPERFAMILY SSF53244 319 466 1.1E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_07210 37346b6390904cc8eb1bab6c275cb548 232 SMART SM00382 30 216 1.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_07210 37346b6390904cc8eb1bab6c275cb548 232 SUPERFAMILY SSF52540 1 226 1.69E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07210 37346b6390904cc8eb1bab6c275cb548 232 Pfam PF00005 ABC transporter 21 167 2.5E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_07210 37346b6390904cc8eb1bab6c275cb548 232 Gene3D G3DSA:3.40.50.300 1 231 7.6E-69 T 11-10-2018 AVL55_07210 37346b6390904cc8eb1bab6c275cb548 232 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_02285 2d8c5e6a753ca50661e2c428363340ac 392 Pfam PF00266 Aminotransferase class-V 53 362 6.3E-13 T 11-10-2018 IPR000192 Aminotransferase class V domain AVL55_02285 2d8c5e6a753ca50661e2c428363340ac 392 SUPERFAMILY SSF53383 25 385 7.02E-37 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_02285 2d8c5e6a753ca50661e2c428363340ac 392 Gene3D G3DSA:3.90.1150.10 296 384 4.8E-36 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_02285 2d8c5e6a753ca50661e2c428363340ac 392 Gene3D G3DSA:3.40.640.10 29 295 4.8E-36 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_10125 0c830157316623bfdc4b7fe09ac103b1 335 Pfam PF01180 Dihydroorotate dehydrogenase 46 334 4.6E-92 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AVL55_10125 0c830157316623bfdc4b7fe09ac103b1 335 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 48.719 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AVL55_10125 0c830157316623bfdc4b7fe09ac103b1 335 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AVL55_10125 0c830157316623bfdc4b7fe09ac103b1 335 PIRSF PIRSF000164 14 335 1.4E-99 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AVL55_10125 0c830157316623bfdc4b7fe09ac103b1 335 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 334 8.4E-135 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AVL55_10125 0c830157316623bfdc4b7fe09ac103b1 335 Gene3D G3DSA:3.20.20.70 1 335 2.8E-135 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_10125 0c830157316623bfdc4b7fe09ac103b1 335 SUPERFAMILY SSF51395 3 334 1.76E-101 T 11-10-2018 AVL55_10125 0c830157316623bfdc4b7fe09ac103b1 335 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 291 311 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 SMART SM00387 317 427 1.9E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 SUPERFAMILY SSF55874 262 423 2.88E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 Gene3D G3DSA:1.10.287.130 161 271 8.6E-19 T 11-10-2018 AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 SUPERFAMILY SSF47384 193 271 3.53E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 Gene3D G3DSA:3.30.565.10 272 424 3.0E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 269 4.9E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 421 5.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03475 c4803f277f01f9cb6c129b3504c2b4ec 429 SMART SM00388 210 273 3.6E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 474 541 5.5E-14 T 11-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 375 385 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 223 233 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 Gene3D G3DSA:3.30.70.80 60 160 2.8E-14 T 11-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 PRINTS PR00723 Subtilisin serine protease family (S8) signature 178 197 3.5E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 PRINTS PR00723 Subtilisin serine protease family (S8) signature 219 232 3.5E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 PRINTS PR00723 Subtilisin serine protease family (S8) signature 374 390 3.5E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 SUPERFAMILY SSF52743 158 438 2.49E-84 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 Gene3D G3DSA:2.60.120.380 460 555 9.2E-36 T 11-10-2018 AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 SUPERFAMILY SSF54897 64 153 8.08E-9 T 11-10-2018 AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 Pfam PF00082 Subtilase family 182 425 2.8E-52 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AVL55_17575 0de0b6c78ab2d8d85b363027023a63bf 556 Gene3D G3DSA:3.40.50.200 161 445 1.6E-84 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_11605 8b628313c61b58b07a203a7b2418826a 447 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 434 33.545 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 AVL55_11605 8b628313c61b58b07a203a7b2418826a 447 SUPERFAMILY SSF109604 24 437 2.51E-79 T 11-10-2018 AVL55_11605 8b628313c61b58b07a203a7b2418826a 447 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 435 3.6E-116 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AVL55_11605 8b628313c61b58b07a203a7b2418826a 447 Pfam PF01966 HD domain 63 145 3.6E-9 T 11-10-2018 IPR006674 HD domain AVL55_11605 8b628313c61b58b07a203a7b2418826a 447 Pfam PF13286 Phosphohydrolase-associated domain 341 431 1.5E-26 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain AVL55_11605 8b628313c61b58b07a203a7b2418826a 447 Gene3D G3DSA:1.10.3210.10 2 435 1.3E-97 T 11-10-2018 AVL55_11605 8b628313c61b58b07a203a7b2418826a 447 SMART SM00471 59 264 6.5E-8 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_19915 24210ac9981962c8ba00d65ef95a72f4 501 Pfam PF04820 Tryptophan halogenase 17 467 2.8E-184 T 11-10-2018 IPR006905 Flavin-dependent halogenase AVL55_19915 24210ac9981962c8ba00d65ef95a72f4 501 SUPERFAMILY SSF51905 15 426 1.49E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_19915 24210ac9981962c8ba00d65ef95a72f4 501 Gene3D G3DSA:3.50.50.60 12 501 9.4E-183 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_19915 24210ac9981962c8ba00d65ef95a72f4 501 PIRSF PIRSF011396 10 501 2.8E-191 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AVL55_16795 86f954504e83f39f192ab9c5e9de3160 343 Pfam PF09952 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 197 339 4.2E-21 T 11-10-2018 IPR019238 Transcriptional regulator, AbiEi 2 antitoxin, Type IV TA system AVL55_08760 598a98d24e77af58e6447d5db01ba2ac 304 PRINTS PR00412 Epoxide hydrolase signature 73 88 2.1E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AVL55_08760 598a98d24e77af58e6447d5db01ba2ac 304 PRINTS PR00412 Epoxide hydrolase signature 119 132 2.1E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AVL55_08760 598a98d24e77af58e6447d5db01ba2ac 304 PRINTS PR00412 Epoxide hydrolase signature 53 71 2.1E-9 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AVL55_08760 598a98d24e77af58e6447d5db01ba2ac 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 1.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_08760 598a98d24e77af58e6447d5db01ba2ac 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 73 88 1.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_08760 598a98d24e77af58e6447d5db01ba2ac 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 1.2E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_08760 598a98d24e77af58e6447d5db01ba2ac 304 Gene3D G3DSA:3.40.50.1820 1 300 6.4E-75 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_08760 598a98d24e77af58e6447d5db01ba2ac 304 Pfam PF00561 alpha/beta hydrolase fold 48 284 3.6E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_08760 598a98d24e77af58e6447d5db01ba2ac 304 SUPERFAMILY SSF53474 29 300 1.99E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 Gene3D G3DSA:3.20.20.80 123 566 4.4E-154 T 11-10-2018 AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 SUPERFAMILY SSF51445 119 558 1.02E-111 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 SUPERFAMILY SSF51011 573 674 1.51E-17 T 11-10-2018 AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 2 666 1.5E-236 T 11-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 Gene3D G3DSA:2.60.40.1180 572 674 8.7E-16 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 Gene3D G3DSA:2.60.40.10 1 121 1.3E-34 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 6 92 5.2E-17 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 SMART SM00642 152 552 1.4E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 Pfam PF00128 Alpha amylase, catalytic domain 174 270 6.1E-9 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_12095 63a87c69c22ec1591ba248f645e8cf68 681 SUPERFAMILY SSF81296 2 122 1.54E-32 T 11-10-2018 IPR014756 Immunoglobulin E-set AVL55_06655 e607aed4ffd4dab593a64ab97a411b3c 130 SUPERFAMILY SSF158682 5 117 3.4E-11 T 11-10-2018 IPR029024 TerB-like AVL55_06655 e607aed4ffd4dab593a64ab97a411b3c 130 Gene3D G3DSA:1.10.3680.10 1 118 1.7E-6 T 11-10-2018 IPR029024 TerB-like AVL55_06655 e607aed4ffd4dab593a64ab97a411b3c 130 Pfam PF05099 Tellurite resistance protein TerB 7 112 1.0E-6 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AVL55_06410 a103aa6d8cbb9d56d4063ec749783b33 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.867 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AVL55_06410 a103aa6d8cbb9d56d4063ec749783b33 230 PIRSF PIRSF006102 2 218 3.0E-77 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AVL55_06410 a103aa6d8cbb9d56d4063ec749783b33 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 7.3E-65 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AVL55_06410 a103aa6d8cbb9d56d4063ec749783b33 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 9 208 1.2E-84 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AVL55_19020 e1a986f236921f8b9c2ac08ad8c76d03 385 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 178 203 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AVL55_19020 e1a986f236921f8b9c2ac08ad8c76d03 385 SMART SM01003 4 145 5.7E-48 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AVL55_19020 e1a986f236921f8b9c2ac08ad8c76d03 385 Gene3D G3DSA:3.40.50.720 145 325 1.8E-126 T 11-10-2018 AVL55_19020 e1a986f236921f8b9c2ac08ad8c76d03 385 Gene3D G3DSA:3.40.50.720 17 371 1.8E-126 T 11-10-2018 AVL55_19020 e1a986f236921f8b9c2ac08ad8c76d03 385 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 16 145 1.4E-36 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AVL55_19020 e1a986f236921f8b9c2ac08ad8c76d03 385 SUPERFAMILY SSF52283 14 176 2.3E-41 T 11-10-2018 AVL55_19020 e1a986f236921f8b9c2ac08ad8c76d03 385 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 150 375 1.0E-61 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AVL55_19020 e1a986f236921f8b9c2ac08ad8c76d03 385 SMART SM01002 154 318 1.1E-72 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AVL55_19020 e1a986f236921f8b9c2ac08ad8c76d03 385 SUPERFAMILY SSF51735 145 318 2.25E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09070 6c6208ef3433de26fb3b4dcef0af20d1 152 SUPERFAMILY SSF55729 3 140 1.26E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_09070 6c6208ef3433de26fb3b4dcef0af20d1 152 Pfam PF13673 Acetyltransferase (GNAT) domain 39 136 3.2E-7 T 11-10-2018 IPR000182 GNAT domain AVL55_09070 6c6208ef3433de26fb3b4dcef0af20d1 152 Gene3D G3DSA:3.40.630.30 2 137 6.9E-24 T 11-10-2018 AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 Gene3D G3DSA:2.120.10.30 183 450 3.0E-95 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 SUPERFAMILY SSF69304 173 448 4.45E-60 T 11-10-2018 AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 SUPERFAMILY SSF52964 28 179 2.75E-39 T 11-10-2018 AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 447 8.4E-158 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 Pfam PF04052 TolB amino-terminal domain 23 125 1.3E-31 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 Gene3D G3DSA:3.40.50.10070 22 181 2.5E-46 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 Pfam PF07676 WD40-like Beta Propeller Repeat 213 248 2.0E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 5.2E-9 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 Pfam PF07676 WD40-like Beta Propeller Repeat 300 335 3.8E-10 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 Pfam PF07676 WD40-like Beta Propeller Repeat 388 412 0.18 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_06840 debe2e40a63dd0131b643c8f1a5e3a72 451 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 446 49.576 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 SUPERFAMILY SSF46785 1 83 7.39E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 Gene3D G3DSA:3.40.190.10 158 243 9.4E-10 T 11-10-2018 AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 Pfam PF03466 LysR substrate binding domain 93 236 6.7E-9 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 SUPERFAMILY SSF53850 87 259 4.71E-13 T 11-10-2018 AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 Gene3D G3DSA:1.10.10.10 1 90 3.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 Gene3D G3DSA:3.40.190.10 93 157 9.4E-10 T 11-10-2018 AVL55_11955 95d29e34f14c2cad17175bc0ecec9764 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.9E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_05290 43eb5b1c105bd0e57e99e226118b87c8 217 Pfam PF00484 Carbonic anhydrase 35 191 4.7E-50 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AVL55_05290 43eb5b1c105bd0e57e99e226118b87c8 217 SUPERFAMILY SSF53056 1 210 3.53E-65 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AVL55_05290 43eb5b1c105bd0e57e99e226118b87c8 217 Gene3D G3DSA:3.40.1050.10 1 204 1.0E-70 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AVL55_05290 43eb5b1c105bd0e57e99e226118b87c8 217 SMART SM00947 27 195 2.3E-65 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AVL55_05290 43eb5b1c105bd0e57e99e226118b87c8 217 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AVL55_05290 43eb5b1c105bd0e57e99e226118b87c8 217 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AVL55_15760 cf2f11ca400c2a189a3ffc2b0edef36d 525 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 32 440 3.2E-65 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_15760 cf2f11ca400c2a189a3ffc2b0edef36d 525 Gene3D G3DSA:1.20.1730.10 22 524 2.2E-105 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AVL55_15760 cf2f11ca400c2a189a3ffc2b0edef36d 525 Pfam PF00474 Sodium:solute symporter family 32 440 9.2E-39 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_12470 7ad0cfc82068df48bfa838facf99ee81 241 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 230 3.3E-94 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AVL55_12470 7ad0cfc82068df48bfa838facf99ee81 241 SUPERFAMILY SSF56300 5 220 1.9E-28 T 11-10-2018 AVL55_12470 7ad0cfc82068df48bfa838facf99ee81 241 Gene3D G3DSA:3.60.21.10 4 237 7.0E-15 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AVL55_12470 7ad0cfc82068df48bfa838facf99ee81 241 Pfam PF00149 Calcineurin-like phosphoesterase 5 199 1.7E-8 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AVL55_12470 7ad0cfc82068df48bfa838facf99ee81 241 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 116.037 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 485 7.1E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 SUPERFAMILY SSF55785 20 113 4.36E-25 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 Pfam PF08447 PAS fold 32 109 3.3E-15 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 110 6.7E-14 T 11-10-2018 IPR000014 PAS domain AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 Gene3D G3DSA:3.30.450.20 5 116 1.8E-23 T 11-10-2018 AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 SUPERFAMILY SSF58104 265 520 6.54E-63 T 11-10-2018 AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 1.0E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.0E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 1.0E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 SMART SM00283 259 520 2.0E-63 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_18680 962ab9ff45ebe1191d14e006026c37c9 523 Gene3D G3DSA:1.10.287.950 234 522 8.0E-62 T 11-10-2018 AVL55_19140 48d2e7a1faebb465988cd20b4e9867fb 607 Pfam PF05960 Bacterial protein of unknown function (DUF885) 62 597 2.3E-168 T 11-10-2018 IPR010281 Protein of unknown function DUF885 AVL55_12610 45fe71c0334e2eaf26406a3b1bec0820 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 89 2.1E-9 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AVL55_12610 45fe71c0334e2eaf26406a3b1bec0820 95 Gene3D G3DSA:3.30.2310.20 1 95 2.5E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AVL55_15390 a90233bc3cadf86f21eb17fe87a97c1d 188 Gene3D G3DSA:3.40.1740.10 3 188 5.3E-70 T 11-10-2018 AVL55_15390 a90233bc3cadf86f21eb17fe87a97c1d 188 Pfam PF02622 Uncharacterized ACR, COG1678 16 175 9.5E-53 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AVL55_15390 a90233bc3cadf86f21eb17fe87a97c1d 188 SUPERFAMILY SSF143456 5 188 5.76E-67 T 11-10-2018 AVL55_15390 a90233bc3cadf86f21eb17fe87a97c1d 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 5 188 38.252 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AVL55_00145 8ba22a9af22fa4df21e65b2b3559ec1a 279 SUPERFAMILY SSF53223 1 102 5.41E-25 T 11-10-2018 AVL55_00145 8ba22a9af22fa4df21e65b2b3559ec1a 279 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 2.3E-72 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AVL55_00145 8ba22a9af22fa4df21e65b2b3559ec1a 279 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 271 29.691 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AVL55_00145 8ba22a9af22fa4df21e65b2b3559ec1a 279 Gene3D G3DSA:3.40.50.10860 5 255 1.3E-75 T 11-10-2018 AVL55_00145 8ba22a9af22fa4df21e65b2b3559ec1a 279 SUPERFAMILY SSF51735 103 270 5.18E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_00145 8ba22a9af22fa4df21e65b2b3559ec1a 279 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 89 8.3E-19 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AVL55_00145 8ba22a9af22fa4df21e65b2b3559ec1a 279 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 192 1.1E-13 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AVL55_00145 8ba22a9af22fa4df21e65b2b3559ec1a 279 Gene3D G3DSA:3.40.50.720 103 246 1.3E-75 T 11-10-2018 AVL55_15700 4de7c8c2e1985599b3563986f8e96d5b 109 SUPERFAMILY SSF103481 5 104 1.7E-16 T 11-10-2018 AVL55_15700 4de7c8c2e1985599b3563986f8e96d5b 109 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.2E-22 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AVL55_15700 4de7c8c2e1985599b3563986f8e96d5b 109 Gene3D G3DSA:1.10.3730.20 1 107 8.5E-27 T 11-10-2018 AVL55_05320 ad403264b164e5ef2b1a993531839f46 152 Gene3D G3DSA:1.10.10.10 101 148 2.2E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_05320 ad403264b164e5ef2b1a993531839f46 152 Pfam PF02631 RecX family 31 148 2.0E-24 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AVL55_05320 ad403264b164e5ef2b1a993531839f46 152 Gene3D G3DSA:1.10.10.10 9 54 6.7E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_05320 ad403264b164e5ef2b1a993531839f46 152 Hamap MF_01114 Regulatory protein RecX [recX]. 1 151 12.593 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AVL55_05320 ad403264b164e5ef2b1a993531839f46 152 Gene3D G3DSA:1.10.10.10 56 99 8.7E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 Pfam PF13414 TPR repeat 42 79 7.6E-7 T 11-10-2018 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 Gene3D G3DSA:1.25.40.10 118 423 2.9E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 Gene3D G3DSA:1.25.40.10 35 117 2.1E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 Pfam PF13432 Tetratricopeptide repeat 815 869 0.0012 T 11-10-2018 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 Pfam PF14559 Tetratricopeptide repeat 182 236 5.4E-6 T 11-10-2018 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 406 438 210.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 609 642 240.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 271 304 68.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 473 506 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 710 743 290.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 844 877 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 507 540 79.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 32 65 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 66 99 24.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SMART SM00028 810 843 1.6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 Gene3D G3DSA:1.25.40.10 551 920 1.0E-32 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SUPERFAMILY SSF48452 178 364 1.96E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 Gene3D G3DSA:1.25.40.10 424 536 4.1E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SUPERFAMILY SSF48452 450 676 1.29E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SUPERFAMILY SSF48452 790 895 3.38E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SUPERFAMILY SSF48452 611 785 2.62E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 SUPERFAMILY SSF48452 39 238 3.8E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02815 3a7375b07e46158b8eb351517876b6df 924 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 15 902 3.2E-150 T 11-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative AVL55_14750 329cf27f8ddb32a62a443b0532fa9802 224 Gene3D G3DSA:3.40.109.10 9 223 3.1E-53 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AVL55_14750 329cf27f8ddb32a62a443b0532fa9802 224 Pfam PF00881 Nitroreductase family 32 200 9.3E-22 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AVL55_14750 329cf27f8ddb32a62a443b0532fa9802 224 SUPERFAMILY SSF55469 19 223 2.09E-42 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AVL55_09955 797b04b243cced821edf2a550f8c5fa5 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 6.8E-100 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AVL55_09955 797b04b243cced821edf2a550f8c5fa5 217 Gene3D G3DSA:3.40.1080.10 1 212 3.6E-99 T 11-10-2018 AVL55_09955 797b04b243cced821edf2a550f8c5fa5 217 Pfam PF01144 Coenzyme A transferase 5 200 5.9E-42 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AVL55_09955 797b04b243cced821edf2a550f8c5fa5 217 SUPERFAMILY SSF100950 4 216 9.57E-74 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_09955 797b04b243cced821edf2a550f8c5fa5 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AVL55_09955 797b04b243cced821edf2a550f8c5fa5 217 SMART SM00882 5 201 3.1E-74 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AVL55_05385 2da92bc4c11856405fcdd3ae113ddc0a 343 SUPERFAMILY SSF161098 94 321 3.27E-22 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_05385 2da92bc4c11856405fcdd3ae113ddc0a 343 Gene3D G3DSA:1.10.3720.10 94 332 2.4E-23 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_05385 2da92bc4c11856405fcdd3ae113ddc0a 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 335 2.1E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_18620 330b7915492a7089488c9cd9353a8e4f 229 Gene3D G3DSA:3.40.50.2300 1 130 9.1E-35 T 11-10-2018 AVL55_18620 330b7915492a7089488c9cd9353a8e4f 229 Gene3D G3DSA:1.10.10.10 131 229 2.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_18620 330b7915492a7089488c9cd9353a8e4f 229 SMART SM00862 152 228 3.5E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_18620 330b7915492a7089488c9cd9353a8e4f 229 SUPERFAMILY SSF52172 1 141 1.71E-37 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_18620 330b7915492a7089488c9cd9353a8e4f 229 Pfam PF00072 Response regulator receiver domain 6 114 6.5E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_18620 330b7915492a7089488c9cd9353a8e4f 229 SUPERFAMILY SSF46894 137 228 2.07E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_18620 330b7915492a7089488c9cd9353a8e4f 229 SMART SM00448 4 114 9.2E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_18620 330b7915492a7089488c9cd9353a8e4f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 5.7E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_10070 2a89688fe7b7e7345f2a06464ca6d6ad 222 SMART SM00945 5 119 4.0E-56 T 11-10-2018 IPR016103 ProQ/FinO domain AVL55_10070 2a89688fe7b7e7345f2a06464ca6d6ad 222 Gene3D G3DSA:1.10.1710.10 2 120 2.7E-21 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily AVL55_10070 2a89688fe7b7e7345f2a06464ca6d6ad 222 Pfam PF17516 ProQ C-terminal domain 167 215 4.2E-23 T 11-10-2018 IPR035236 RNA chaperone ProQ, C-terminal AVL55_10070 2a89688fe7b7e7345f2a06464ca6d6ad 222 SUPERFAMILY SSF48657 4 117 3.4E-35 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily AVL55_10070 2a89688fe7b7e7345f2a06464ca6d6ad 222 Hamap MF_00749 RNA chaperone ProQ [proQ]. 2 217 27.01 T 11-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AVL55_10070 2a89688fe7b7e7345f2a06464ca6d6ad 222 Pfam PF04352 ProQ/FINO family 8 115 7.4E-41 T 11-10-2018 IPR016103 ProQ/FinO domain AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 SUPERFAMILY SSF52540 1 209 6.53E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 PRINTS PR00094 Adenylate kinase signature 173 187 3.1E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.1E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.1E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.1E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 PRINTS PR00094 Adenylate kinase signature 156 171 3.1E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 Gene3D G3DSA:3.40.50.300 1 213 1.6E-78 T 11-10-2018 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 7.9E-15 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 211 5.1E-75 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 50.898 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 Pfam PF00406 Adenylate kinase 5 185 1.9E-58 T 11-10-2018 AVL55_13080 71f25701dfbc9dba6f65b5453f271101 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AVL55_04305 e9e93e9d647e8a2076556e0b073543a7 349 Gene3D G3DSA:1.10.760.10 31 339 1.9E-84 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_04305 e9e93e9d647e8a2076556e0b073543a7 349 SUPERFAMILY SSF46626 12 174 3.18E-37 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_04305 e9e93e9d647e8a2076556e0b073543a7 349 TIGRFAM TIGR04039 MXAN_0977_Heme2: di-heme enzyme, MXAN_0977 family 26 343 2.2E-140 T 11-10-2018 IPR023929 Di-heme enzyme, MXAN0977 AVL55_04305 e9e93e9d647e8a2076556e0b073543a7 349 Gene3D G3DSA:1.10.760.10 173 338 1.9E-84 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_04305 e9e93e9d647e8a2076556e0b073543a7 349 SUPERFAMILY SSF46626 163 336 7.79E-32 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_04305 e9e93e9d647e8a2076556e0b073543a7 349 Pfam PF00034 Cytochrome c 201 335 3.2E-4 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_04305 e9e93e9d647e8a2076556e0b073543a7 349 Pfam PF03150 Di-haem cytochrome c peroxidase 35 184 7.4E-38 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AVL55_04305 e9e93e9d647e8a2076556e0b073543a7 349 PIRSF PIRSF000294 16 346 9.8E-64 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AVL55_19735 8ee8db93351129809d732d240c8825f2 455 Pfam PF03109 ABC1 family 127 234 1.4E-23 T 11-10-2018 IPR004147 UbiB domain AVL55_19735 8ee8db93351129809d732d240c8825f2 455 SUPERFAMILY SSF56112 109 326 4.08E-13 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_00860 6eb00810ba5ba482ada385df2ac02db1 161 Gene3D G3DSA:3.50.30.40 1 161 8.2E-55 T 11-10-2018 AVL55_00860 6eb00810ba5ba482ada385df2ac02db1 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.9E-59 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AVL55_00860 6eb00810ba5ba482ada385df2ac02db1 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 9.3E-78 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AVL55_00860 6eb00810ba5ba482ada385df2ac02db1 161 Pfam PF03737 Aldolase/RraA 7 152 1.5E-34 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AVL55_00860 6eb00810ba5ba482ada385df2ac02db1 161 SUPERFAMILY SSF89562 2 158 1.96E-43 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AVL55_00860 6eb00810ba5ba482ada385df2ac02db1 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 44.744 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AVL55_02005 628b76e1dd476d69f2328ce53ec44113 281 PIRSF PIRSF000728 1 255 2.4E-62 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AVL55_02005 628b76e1dd476d69f2328ce53ec44113 281 Gene3D G3DSA:3.40.1160.10 2 253 1.2E-60 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_02005 628b76e1dd476d69f2328ce53ec44113 281 Pfam PF00696 Amino acid kinase family 6 235 1.2E-38 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AVL55_02005 628b76e1dd476d69f2328ce53ec44113 281 TIGRFAM TIGR00761 argB: acetylglutamate kinase 6 233 1.8E-56 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AVL55_02005 628b76e1dd476d69f2328ce53ec44113 281 SUPERFAMILY SSF53633 5 254 7.39E-54 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AVL55_02005 628b76e1dd476d69f2328ce53ec44113 281 Hamap MF_00082 Acetylglutamate kinase [argB]. 3 251 40.069 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AVL55_15895 1d7d840ab958fb887253b6f220dd50f7 603 Gene3D G3DSA:3.40.640.10 135 414 1.5E-48 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_15895 1d7d840ab958fb887253b6f220dd50f7 603 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 142 550 1.7E-61 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AVL55_15895 1d7d840ab958fb887253b6f220dd50f7 603 SUPERFAMILY SSF53383 148 552 1.53E-52 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_15895 1d7d840ab958fb887253b6f220dd50f7 603 Gene3D G3DSA:3.90.1150.10 415 554 2.6E-18 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_10225 15a0453b3096cb31f814ba895dca2672 211 SMART SM00857 4 158 1.4E-34 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AVL55_10225 15a0453b3096cb31f814ba895dca2672 211 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AVL55_10225 15a0453b3096cb31f814ba895dca2672 211 SUPERFAMILY SSF53041 3 158 9.16E-30 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AVL55_10225 15a0453b3096cb31f814ba895dca2672 211 ProSitePatterns PS00398 Site-specific recombinases signature 2. 63 75 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AVL55_10225 15a0453b3096cb31f814ba895dca2672 211 Pfam PF00239 Resolvase, N terminal domain 4 158 1.4E-27 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AVL55_10225 15a0453b3096cb31f814ba895dca2672 211 Gene3D G3DSA:3.40.50.1390 2 168 1.3E-29 T 11-10-2018 AVL55_17290 f323efc43f5b921920947b00d6991241 292 Gene3D G3DSA:3.90.550.10 1 292 5.7E-86 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17290 f323efc43f5b921920947b00d6991241 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 3 287 9.6E-152 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AVL55_17290 f323efc43f5b921920947b00d6991241 292 SUPERFAMILY SSF53448 2 287 1.36E-89 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17290 f323efc43f5b921920947b00d6991241 292 Pfam PF00483 Nucleotidyl transferase 3 239 2.9E-69 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AVL55_11315 b6d3976e28fdb9a412769b07b7c06fb2 820 Gene3D G3DSA:1.10.540.10 123 236 1.2E-98 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AVL55_11315 b6d3976e28fdb9a412769b07b7c06fb2 820 Gene3D G3DSA:1.20.140.10 361 506 1.2E-98 T 11-10-2018 AVL55_11315 b6d3976e28fdb9a412769b07b7c06fb2 820 SUPERFAMILY SSF47203 361 516 1.61E-23 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AVL55_11315 b6d3976e28fdb9a412769b07b7c06fb2 820 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 507 6.5E-12 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AVL55_11315 b6d3976e28fdb9a412769b07b7c06fb2 820 Pfam PF09317 Domain of unknown function (DUF1974) 515 797 2.1E-112 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AVL55_11315 b6d3976e28fdb9a412769b07b7c06fb2 820 SUPERFAMILY SSF56645 121 356 1.57E-45 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AVL55_11315 b6d3976e28fdb9a412769b07b7c06fb2 820 Gene3D G3DSA:2.40.110.10 237 360 1.2E-98 T 11-10-2018 AVL55_11315 b6d3976e28fdb9a412769b07b7c06fb2 820 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 139 234 2.9E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AVL55_03330 6684be90c78c2c2ea9496efe9b87ded4 328 SUPERFAMILY SSF53659 5 326 4.07E-111 T 11-10-2018 AVL55_03330 6684be90c78c2c2ea9496efe9b87ded4 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 1.5E-125 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AVL55_03330 6684be90c78c2c2ea9496efe9b87ded4 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 319 4.9E-106 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AVL55_03330 6684be90c78c2c2ea9496efe9b87ded4 328 Gene3D G3DSA:3.40.718.10 1 328 4.3E-125 T 11-10-2018 AVL55_03330 6684be90c78c2c2ea9496efe9b87ded4 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 327 35.194 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 AVL55_19095 ef6629153a22434e9582bdf7c2ed44e9 158 Pfam PF10688 Bacterial inner membrane protein 2 150 2.5E-53 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AVL55_19095 ef6629153a22434e9582bdf7c2ed44e9 158 PIRSF PIRSF011443 1 157 1.1E-53 T 11-10-2018 IPR026267 Inner membrane protein YgjV AVL55_17945 90ada6e6209e373533957cd1285bdd21 227 PIRSF PIRSF004553 44 227 2.3E-51 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AVL55_17945 90ada6e6209e373533957cd1285bdd21 227 Pfam PF03602 Conserved hypothetical protein 95 45 223 7.2E-56 T 11-10-2018 AVL55_17945 90ada6e6209e373533957cd1285bdd21 227 Gene3D G3DSA:3.40.50.150 32 226 6.4E-57 T 11-10-2018 AVL55_17945 90ada6e6209e373533957cd1285bdd21 227 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 42 225 2.1E-56 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AVL55_17945 90ada6e6209e373533957cd1285bdd21 227 SUPERFAMILY SSF53335 45 221 2.67E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_00550 bdfb5471c4be7c8d438e266cef7330e8 353 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 352 4.7E-49 T 11-10-2018 IPR000160 GGDEF domain AVL55_00550 bdfb5471c4be7c8d438e266cef7330e8 353 SMART SM00267 181 352 8.9E-55 T 11-10-2018 IPR000160 GGDEF domain AVL55_00550 bdfb5471c4be7c8d438e266cef7330e8 353 SUPERFAMILY SSF55073 199 352 2.88E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_00550 bdfb5471c4be7c8d438e266cef7330e8 353 Gene3D G3DSA:3.30.70.270 180 353 3.0E-52 T 11-10-2018 AVL55_00550 bdfb5471c4be7c8d438e266cef7330e8 353 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 350 2.2E-44 T 11-10-2018 IPR000160 GGDEF domain AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 29 1285 19.949 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 Gene3D G3DSA:1.10.486.10 642 784 1.5E-100 T 11-10-2018 AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 Gene3D G3DSA:1.10.3170.10 177 381 1.5E-104 T 11-10-2018 AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 SUPERFAMILY SSF52980 958 1285 1.29E-69 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 Pfam PF00580 UvrD/REP helicase N-terminal domain 36 470 5.7E-58 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 Gene3D G3DSA:3.40.50.300 479 889 1.5E-100 T 11-10-2018 AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 Gene3D G3DSA:3.40.50.300 31 470 1.5E-104 T 11-10-2018 AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 Pfam PF13361 UvrD-like helicase C-terminal domain 738 879 5.2E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 32 1284 3.8E-240 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 SUPERFAMILY SSF52540 27 883 5.63E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1052 1256 2.3E-7 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AVL55_11845 ccffb93ac160346de07964551a5f4848 1321 Gene3D G3DSA:3.90.320.10 948 1291 4.8E-81 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 Gene3D G3DSA:1.10.230.10 267 375 5.1E-146 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 PRINTS PR00143 Citrate synthase signature 295 315 1.6E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 PRINTS PR00143 Citrate synthase signature 378 392 1.6E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 PRINTS PR00143 Citrate synthase signature 358 374 1.6E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 PRINTS PR00143 Citrate synthase signature 164 177 1.6E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 PRINTS PR00143 Citrate synthase signature 218 233 1.6E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 PRINTS PR00143 Citrate synthase signature 240 268 1.6E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 PIRSF PIRSF001369 37 425 5.7E-167 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 SUPERFAMILY SSF48256 5 424 9.42E-164 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 421 2.7E-228 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 Gene3D G3DSA:1.10.580.10 56 410 5.1E-146 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 Gene3D G3DSA:2.20.28.60 1 49 3.8E-23 T 11-10-2018 AVL55_09575 256bdfc2c14963294f13ab0c9279db2e 425 Pfam PF00285 Citrate synthase, C-terminal domain 45 410 6.1E-132 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_10790 5c93192e3caa3796f02d57e3cbe4c41d 340 SUPERFAMILY SSF52151 1 325 3.14E-50 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AVL55_10790 5c93192e3caa3796f02d57e3cbe4c41d 340 Gene3D G3DSA:3.40.1090.20 1 69 1.4E-7 T 11-10-2018 AVL55_10790 5c93192e3caa3796f02d57e3cbe4c41d 340 Pfam PF01734 Patatin-like phospholipase 120 162 5.7E-7 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AVL55_10790 5c93192e3caa3796f02d57e3cbe4c41d 340 Pfam PF01734 Patatin-like phospholipase 5 52 1.1E-7 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AVL55_10790 5c93192e3caa3796f02d57e3cbe4c41d 340 Gene3D G3DSA:3.40.1090.10 85 212 2.4E-15 T 11-10-2018 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 Gene3D G3DSA:2.40.10.10 42 150 6.0E-27 T 11-10-2018 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 SUPERFAMILY SSF50156 251 348 3.02E-20 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 SMART SM00228 268 340 2.4E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 Gene3D G3DSA:2.40.10.10 154 268 4.3E-31 T 11-10-2018 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 Pfam PF13365 Trypsin-like peptidase domain 91 223 1.5E-26 T 11-10-2018 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 SUPERFAMILY SSF50494 48 273 5.74E-53 T 11-10-2018 IPR009003 Peptidase S1, PA clan AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 Gene3D G3DSA:2.30.42.10 269 354 2.6E-19 T 11-10-2018 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 Pfam PF13180 PDZ domain 270 348 6.2E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 PRINTS PR00834 HtrA/DegQ protease family signature 298 310 8.6E-44 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 8.6E-44 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 PRINTS PR00834 HtrA/DegQ protease family signature 121 141 8.6E-44 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 PRINTS PR00834 HtrA/DegQ protease family signature 194 211 8.6E-44 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 8.6E-44 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_03620 1dc9beb21846e4d2ca2d2fe33d1e1a5d 356 PRINTS PR00834 HtrA/DegQ protease family signature 161 185 8.6E-44 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AVL55_08955 d766c424db4445c68ba85c8274bb52db 746 SUPERFAMILY SSF102114 331 584 5.62E-12 T 11-10-2018 AVL55_08955 d766c424db4445c68ba85c8274bb52db 746 Gene3D G3DSA:3.80.30.20 346 614 2.6E-16 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AVL55_08955 d766c424db4445c68ba85c8274bb52db 746 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 1 615 1.3E-257 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AVL55_08955 d766c424db4445c68ba85c8274bb52db 746 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 3 617 47.814 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AVL55_08955 d766c424db4445c68ba85c8274bb52db 746 Pfam PF08497 Radical SAM N-terminal 1 350 6.6E-140 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AVL55_08955 d766c424db4445c68ba85c8274bb52db 746 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 351 371 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AVL55_08955 d766c424db4445c68ba85c8274bb52db 746 Pfam PF04055 Radical SAM superfamily 351 554 8.8E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_08955 d766c424db4445c68ba85c8274bb52db 746 Pfam PF11842 Domain of unknown function (DUF3362) 565 712 7.2E-40 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AVL55_08955 d766c424db4445c68ba85c8274bb52db 746 SMART SM00729 347 598 3.4E-7 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AVL55_08850 cf1f412786985de7130a6ba0833a272a 152 Pfam PF02576 RimP N-terminal domain 11 83 8.7E-32 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AVL55_08850 cf1f412786985de7130a6ba0833a272a 152 Gene3D G3DSA:3.30.300.70 1 80 4.4E-29 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AVL55_08850 cf1f412786985de7130a6ba0833a272a 152 SUPERFAMILY SSF74942 84 151 5.49E-16 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AVL55_08850 cf1f412786985de7130a6ba0833a272a 152 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.8E-14 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AVL55_08850 cf1f412786985de7130a6ba0833a272a 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.622 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AVL55_08850 cf1f412786985de7130a6ba0833a272a 152 SUPERFAMILY SSF75420 3 83 1.83E-27 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AVL55_16790 fada5ea4576fc86dd16b08c4c787eb75 299 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 51 69 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AVL55_16790 fada5ea4576fc86dd16b08c4c787eb75 299 PIRSF PIRSF006621 1 271 3.6E-61 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AVL55_16790 fada5ea4576fc86dd16b08c4c787eb75 299 Gene3D G3DSA:3.20.20.70 1 208 8.0E-61 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_16790 fada5ea4576fc86dd16b08c4c787eb75 299 SUPERFAMILY SSF51395 14 265 6.33E-59 T 11-10-2018 AVL55_16790 fada5ea4576fc86dd16b08c4c787eb75 299 Gene3D G3DSA:1.20.120.1460 213 289 2.4E-21 T 11-10-2018 AVL55_16790 fada5ea4576fc86dd16b08c4c787eb75 299 Pfam PF01207 Dihydrouridine synthase (Dus) 1 281 7.8E-71 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AVL55_12950 21648fecfe1a202615405be9354e369e 132 Gene3D G3DSA:2.170.150.70 4 115 1.5E-12 T 11-10-2018 AVL55_12950 21648fecfe1a202615405be9354e369e 132 SUPERFAMILY SSF51316 3 132 1.26E-33 T 11-10-2018 IPR011057 Mss4-like superfamily AVL55_12950 21648fecfe1a202615405be9354e369e 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 111 1.1E-18 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AVL55_10155 f0af259af6738ac55dad78d3c0a5d17a 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 52.935 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_10155 f0af259af6738ac55dad78d3c0a5d17a 172 Gene3D G3DSA:3.10.129.10 2 172 7.0E-68 T 11-10-2018 AVL55_10155 f0af259af6738ac55dad78d3c0a5d17a 172 Pfam PF07977 FabA-like domain 29 158 2.7E-53 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_10155 f0af259af6738ac55dad78d3c0a5d17a 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 9.7E-95 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_10155 f0af259af6738ac55dad78d3c0a5d17a 172 SUPERFAMILY SSF54637 4 169 9.49E-59 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_08650 5b457de193efac0164b30367ab4c7fed 206 Hamap MF_00528 Septum formation protein Maf [maf]. 3 198 24.641 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AVL55_08650 5b457de193efac0164b30367ab4c7fed 206 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 192 4.6E-45 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AVL55_08650 5b457de193efac0164b30367ab4c7fed 206 SUPERFAMILY SSF52972 3 192 1.83E-50 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AVL55_08650 5b457de193efac0164b30367ab4c7fed 206 Gene3D G3DSA:3.90.950.10 2 197 4.9E-52 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AVL55_08650 5b457de193efac0164b30367ab4c7fed 206 PIRSF PIRSF006305 2 197 1.9E-40 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AVL55_08650 5b457de193efac0164b30367ab4c7fed 206 Pfam PF02545 Maf-like protein 4 192 6.8E-42 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AVL55_19450 d9732e97f6539e90806eca4c89ecf3f6 344 SUPERFAMILY SSF53474 34 310 8.54E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_19450 d9732e97f6539e90806eca4c89ecf3f6 344 PIRSF PIRSF005211 1 338 2.0E-100 T 11-10-2018 IPR012020 AB hydrolase 4 family AVL55_19450 d9732e97f6539e90806eca4c89ecf3f6 344 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 237 278 - T 11-10-2018 IPR000952 AB hydrolase 4, conserved site AVL55_19450 d9732e97f6539e90806eca4c89ecf3f6 344 Pfam PF00561 alpha/beta hydrolase fold 70 312 2.1E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_19450 d9732e97f6539e90806eca4c89ecf3f6 344 Gene3D G3DSA:3.40.50.1820 56 332 6.6E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 Gene3D G3DSA:3.40.50.12740 7 166 8.5E-40 T 11-10-2018 AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 SMART SM00421 234 291 9.3E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 Pfam PF00072 Response regulator receiver domain 8 118 1.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 SUPERFAMILY SSF52172 8 125 1.99E-38 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 237 251 6.4E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 251 267 6.4E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 267 279 6.4E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 SMART SM00448 6 117 3.7E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 Pfam PF00196 Bacterial regulatory proteins, luxR family 237 291 1.3E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 SUPERFAMILY SSF46894 231 293 6.12E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_14965 c6712f7eddd3620612ab6ae671eab0f7 298 Gene3D G3DSA:1.10.10.10 230 295 1.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_05315 41da3d18dc3eed086f91bf157b2dc596 441 SUPERFAMILY SSF55729 214 379 1.59E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_05315 41da3d18dc3eed086f91bf157b2dc596 441 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 13 413 6.9E-131 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition AVL55_05885 a49f6fe2d62813bcc5f2f5fcd5f2d1ee 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05885 a49f6fe2d62813bcc5f2f5fcd5f2d1ee 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.5E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05885 a49f6fe2d62813bcc5f2f5fcd5f2d1ee 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.5E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05885 a49f6fe2d62813bcc5f2f5fcd5f2d1ee 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.5E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05885 a49f6fe2d62813bcc5f2f5fcd5f2d1ee 141 SUPERFAMILY SSF46955 1 126 1.28E-36 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_05885 a49f6fe2d62813bcc5f2f5fcd5f2d1ee 141 Pfam PF13411 MerR HTH family regulatory protein 1 68 3.0E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05885 a49f6fe2d62813bcc5f2f5fcd5f2d1ee 141 SMART SM00422 1 70 4.2E-31 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05885 a49f6fe2d62813bcc5f2f5fcd5f2d1ee 141 Gene3D G3DSA:1.10.1660.10 1 125 4.4E-34 T 11-10-2018 AVL55_05885 a49f6fe2d62813bcc5f2f5fcd5f2d1ee 141 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.2E-46 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AVL55_19050 9626767f6aad003de8e24ffebff6e627 299 Pfam PF13202 EF hand 262 276 0.086 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AVL55_19050 9626767f6aad003de8e24ffebff6e627 299 ProSitePatterns PS00018 EF-hand calcium-binding domain. 244 256 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AVL55_19050 9626767f6aad003de8e24ffebff6e627 299 SUPERFAMILY SSF47473 174 279 2.93E-13 T 11-10-2018 IPR011992 EF-hand domain pair AVL55_19050 9626767f6aad003de8e24ffebff6e627 299 SUPERFAMILY SSF47473 33 133 1.11E-12 T 11-10-2018 IPR011992 EF-hand domain pair AVL55_19050 9626767f6aad003de8e24ffebff6e627 299 ProSitePatterns PS00018 EF-hand calcium-binding domain. 58 70 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AVL55_19050 9626767f6aad003de8e24ffebff6e627 299 Gene3D G3DSA:1.10.238.10 160 221 3.0E-7 T 11-10-2018 AVL55_19050 9626767f6aad003de8e24ffebff6e627 299 Gene3D G3DSA:1.10.238.10 31 135 5.4E-9 T 11-10-2018 AVL55_19050 9626767f6aad003de8e24ffebff6e627 299 Gene3D G3DSA:1.10.238.10 224 283 3.4E-5 T 11-10-2018 AVL55_13265 7f5bf081d7bb946b635ae66821dde453 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 199 6.5E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_13265 7f5bf081d7bb946b635ae66821dde453 203 SUPERFAMILY SSF88946 25 122 1.14E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_13265 7f5bf081d7bb946b635ae66821dde453 203 Pfam PF08281 Sigma-70, region 4 143 195 1.4E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_13265 7f5bf081d7bb946b635ae66821dde453 203 SUPERFAMILY SSF88659 139 200 7.85E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_13265 7f5bf081d7bb946b635ae66821dde453 203 Gene3D G3DSA:1.10.1740.10 23 106 3.4E-22 T 11-10-2018 AVL55_13265 7f5bf081d7bb946b635ae66821dde453 203 Gene3D G3DSA:1.10.10.10 135 203 1.2E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_13265 7f5bf081d7bb946b635ae66821dde453 203 Pfam PF04542 Sigma-70 region 2 43 110 6.0E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_00945 c4f2c21bf59184d6e1cab4316d35072e 351 SUPERFAMILY SSF54197 5 176 1.15E-68 T 11-10-2018 IPR036265 HIT-like superfamily AVL55_00945 c4f2c21bf59184d6e1cab4316d35072e 351 SUPERFAMILY SSF54197 182 344 2.55E-46 T 11-10-2018 IPR036265 HIT-like superfamily AVL55_00945 c4f2c21bf59184d6e1cab4316d35072e 351 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 346 6.8E-62 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AVL55_00945 c4f2c21bf59184d6e1cab4316d35072e 351 Gene3D G3DSA:3.30.428.10 176 350 2.0E-66 T 11-10-2018 IPR036265 HIT-like superfamily AVL55_00945 c4f2c21bf59184d6e1cab4316d35072e 351 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 176 9.1E-70 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AVL55_00945 c4f2c21bf59184d6e1cab4316d35072e 351 Gene3D G3DSA:3.30.428.10 46 175 1.8E-53 T 11-10-2018 IPR036265 HIT-like superfamily AVL55_00945 c4f2c21bf59184d6e1cab4316d35072e 351 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 3 346 9.8E-163 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AVL55_00945 c4f2c21bf59184d6e1cab4316d35072e 351 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 11-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AVL55_00945 c4f2c21bf59184d6e1cab4316d35072e 351 PIRSF PIRSF000808 2 341 3.0E-116 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 Pfam PF03477 ATP cone domain 6 92 1.2E-17 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 SUPERFAMILY SSF51998 222 741 1.28E-168 T 11-10-2018 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 Gene3D G3DSA:3.20.70.20 78 741 3.2E-157 T 11-10-2018 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.3E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.3E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.3E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.3E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.3E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.3E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.0E-177 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 SUPERFAMILY SSF48168 10 221 1.44E-73 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.3E-12 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11045 93ca350bbeeb0c13f539ced96036aefd 773 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 2.2E-121 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_09720 6d1d1435aacfb981c79c8a24651d481a 253 Gene3D G3DSA:3.40.1390.30 99 224 9.8E-81 T 11-10-2018 AVL55_09720 6d1d1435aacfb981c79c8a24651d481a 253 SUPERFAMILY SSF102705 4 252 3.92E-79 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AVL55_09720 6d1d1435aacfb981c79c8a24651d481a 253 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 7 252 1.7E-65 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AVL55_09720 6d1d1435aacfb981c79c8a24651d481a 253 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 241 3.1E-58 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AVL55_09720 6d1d1435aacfb981c79c8a24651d481a 253 Gene3D G3DSA:3.40.1390.30 16 238 9.8E-81 T 11-10-2018 AVL55_04705 ad85e95f212c32e9eb4ea53747014805 185 SUPERFAMILY SSF55194 3 184 5.1E-69 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AVL55_04705 ad85e95f212c32e9eb4ea53747014805 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.881 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AVL55_04705 ad85e95f212c32e9eb4ea53747014805 185 Gene3D G3DSA:3.30.1360.40 31 105 1.2E-65 T 11-10-2018 AVL55_04705 ad85e95f212c32e9eb4ea53747014805 185 Gene3D G3DSA:1.10.132.20 12 182 1.2E-65 T 11-10-2018 AVL55_04705 ad85e95f212c32e9eb4ea53747014805 185 Pfam PF01765 Ribosome recycling factor 20 183 6.3E-61 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AVL55_04705 ad85e95f212c32e9eb4ea53747014805 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 9.3E-73 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AVL55_13730 1f7688f548365315c9455456db917fee 489 SMART SM00116 96 144 4.2E-8 T 11-10-2018 IPR000644 CBS domain AVL55_13730 1f7688f548365315c9455456db917fee 489 SMART SM00116 158 206 2.4E-6 T 11-10-2018 IPR000644 CBS domain AVL55_13730 1f7688f548365315c9455456db917fee 489 SUPERFAMILY SSF54631 95 203 2.27E-27 T 11-10-2018 AVL55_13730 1f7688f548365315c9455456db917fee 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AVL55_13730 1f7688f548365315c9455456db917fee 489 SUPERFAMILY SSF51412 1 479 1.02E-127 T 11-10-2018 AVL55_13730 1f7688f548365315c9455456db917fee 489 Pfam PF00571 CBS domain 158 202 4.8E-5 T 11-10-2018 IPR000644 CBS domain AVL55_13730 1f7688f548365315c9455456db917fee 489 Pfam PF00571 CBS domain 95 140 2.6E-9 T 11-10-2018 IPR000644 CBS domain AVL55_13730 1f7688f548365315c9455456db917fee 489 PIRSF PIRSF000130 1 489 6.4E-199 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AVL55_13730 1f7688f548365315c9455456db917fee 489 Gene3D G3DSA:3.20.20.70 1 488 2.3E-208 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_13730 1f7688f548365315c9455456db917fee 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 1.4E-161 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AVL55_13730 1f7688f548365315c9455456db917fee 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 1.2E-189 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AVL55_13730 1f7688f548365315c9455456db917fee 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 82.907 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AVL55_13730 1f7688f548365315c9455456db917fee 489 SMART SM01240 7 475 0.0 T 11-10-2018 AVL55_08410 80583daba727a7b33886e35b88d30567 535 Gene3D G3DSA:3.90.226.10 274 535 3.6E-104 T 11-10-2018 AVL55_08410 80583daba727a7b33886e35b88d30567 535 Gene3D G3DSA:3.90.226.10 1 271 3.5E-95 T 11-10-2018 AVL55_08410 80583daba727a7b33886e35b88d30567 535 SUPERFAMILY SSF52096 237 517 7.14E-90 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_08410 80583daba727a7b33886e35b88d30567 535 Pfam PF01039 Carboxyl transferase domain 48 526 9.4E-153 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AVL55_08410 80583daba727a7b33886e35b88d30567 535 SUPERFAMILY SSF52096 23 270 8.4E-70 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_04545 7beaebd2db8725d6955a6ac01e95088b 506 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 148 160 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AVL55_04545 7beaebd2db8725d6955a6ac01e95088b 506 Pfam PF00854 POT family 87 459 3.5E-60 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AVL55_04545 7beaebd2db8725d6955a6ac01e95088b 506 Gene3D G3DSA:1.20.1250.20 1 496 2.8E-127 T 11-10-2018 AVL55_04545 7beaebd2db8725d6955a6ac01e95088b 506 SUPERFAMILY SSF103473 19 495 5.67E-27 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_04545 7beaebd2db8725d6955a6ac01e95088b 506 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 491 8.5E-114 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AVL55_04545 7beaebd2db8725d6955a6ac01e95088b 506 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 75 99 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AVL55_04935 a00601e40c6bd4a60b2e6b17263bb876 142 SUPERFAMILY SSF101116 7 129 3.92E-39 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 AVL55_04935 a00601e40c6bd4a60b2e6b17263bb876 142 Gene3D G3DSA:1.20.120.340 2 128 1.5E-38 T 11-10-2018 AVL55_04935 a00601e40c6bd4a60b2e6b17263bb876 142 Pfam PF02561 Flagellar protein FliS 7 123 1.4E-36 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AVL55_04935 a00601e40c6bd4a60b2e6b17263bb876 142 PIRSF PIRSF039090 1 134 7.7E-49 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AVL55_04935 a00601e40c6bd4a60b2e6b17263bb876 142 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 123 6.4E-27 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 SUPERFAMILY SSF109998 248 431 2.26E-47 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 155 230 2.8E-14 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 9.0E-43 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 Hamap MF_00303 Trigger factor [tig]. 1 420 22.247 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 Gene3D G3DSA:3.10.50.40 150 246 3.3E-103 T 11-10-2018 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 SUPERFAMILY SSF54534 88 241 2.55E-39 T 11-10-2018 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 TIGRFAM TIGR00115 tig: trigger factor 11 414 5.4E-147 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 SUPERFAMILY SSF102735 1 131 2.35E-41 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 PIRSF PIRSF003095 1 434 2.1E-130 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 415 2.5E-39 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 Gene3D G3DSA:3.30.70.1050 1 115 4.0E-41 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AVL55_13650 8ebcce4b795795f75b95a11ff6ad2b8b 434 Gene3D G3DSA:1.10.3120.10 116 419 3.3E-103 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AVL55_00975 b32e498b06d7c4a63d9d44c5399428f6 90 TIGRFAM TIGR03976 chp_LLNDYxLRE: His-Xaa-Ser system protein HxsD 5 89 5.7E-23 T 11-10-2018 IPR023974 His-Xaa-Ser system protein HxsD AVL55_02610 40eeeb82d1624c06e1028b35020a7eb6 211 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 210 1.1E-75 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AVL55_02610 40eeeb82d1624c06e1028b35020a7eb6 211 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 8 208 1.3E-67 T 11-10-2018 AVL55_02610 40eeeb82d1624c06e1028b35020a7eb6 211 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 133 148 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AVL55_02610 40eeeb82d1624c06e1028b35020a7eb6 211 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 211 36.445 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AVL55_02610 40eeeb82d1624c06e1028b35020a7eb6 211 Gene3D G3DSA:3.40.50.150 2 210 1.3E-72 T 11-10-2018 AVL55_02610 40eeeb82d1624c06e1028b35020a7eb6 211 SUPERFAMILY SSF53335 11 206 3.77E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 SUPERFAMILY SSF54713 55 144 2.94E-19 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 285 2.0E-112 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 SUPERFAMILY SSF46934 1 55 1.53E-18 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 SUPERFAMILY SSF54713 147 285 1.96E-53 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 Gene3D G3DSA:3.30.479.20 56 146 1.8E-24 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 Gene3D G3DSA:1.10.8.10 1 55 1.7E-25 T 11-10-2018 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 Pfam PF00889 Elongation factor TS 70 268 5.6E-66 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 Hamap MF_00050 Elongation factor Ts [tsf]. 1 286 80.499 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 Gene3D G3DSA:1.10.286.20 192 231 1.1E-22 T 11-10-2018 AVL55_04695 261658e5534a5fc2eddddfb586ad06e9 290 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 838 962 1.5E-10 T 11-10-2018 IPR000014 PAS domain AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 Gene3D G3DSA:2.60.40.10 685 796 1.3E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 Gene3D G3DSA:2.130.10.10 458 677 6.6E-29 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 Gene3D G3DSA:3.30.450.20 834 959 2.1E-17 T 11-10-2018 AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 Pfam PF00990 Diguanylate cyclase, GGDEF domain 966 1119 8.5E-48 T 11-10-2018 IPR000160 GGDEF domain AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 Gene3D G3DSA:3.20.20.450 1141 1388 1.9E-73 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 SUPERFAMILY SSF141868 1142 1388 6.15E-71 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 SUPERFAMILY SSF55073 971 1127 3.34E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 SMART SM00267 955 1126 3.3E-55 T 11-10-2018 IPR000160 GGDEF domain AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 SUPERFAMILY SSF101898 382 634 5.75E-10 T 11-10-2018 AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 Gene3D G3DSA:3.30.70.270 960 1140 2.8E-57 T 11-10-2018 AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 Pfam PF00563 EAL domain 1143 1376 5.0E-54 T 11-10-2018 IPR001633 EAL domain AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 SUPERFAMILY SSF55785 851 962 2.62E-14 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 Pfam PF13426 PAS domain 852 954 1.6E-8 T 11-10-2018 IPR000014 PAS domain AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 964 1119 2.2E-42 T 11-10-2018 IPR000160 GGDEF domain AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 Gene3D G3DSA:2.130.10.10 25 347 6.3E-39 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 SMART SM00052 1137 1381 2.2E-75 T 11-10-2018 IPR001633 EAL domain AVL55_11935 1001ed7a8fa09743a6806d415af9daa0 1390 SUPERFAMILY SSF63829 29 169 5.01E-7 T 11-10-2018 AVL55_18920 60ca1815a31fd9fbf6cc0cce4e309dd6 444 SUPERFAMILY SSF102405 98 275 4.88E-24 T 11-10-2018 AVL55_18920 60ca1815a31fd9fbf6cc0cce4e309dd6 444 Gene3D G3DSA:3.40.50.450 45 295 2.6E-41 T 11-10-2018 AVL55_18920 60ca1815a31fd9fbf6cc0cce4e309dd6 444 Pfam PF02481 DNA recombination-mediator protein A 89 271 1.5E-39 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AVL55_09040 6e9a220f7d663b27a28c9d4a2b40f53c 270 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 269 76.175 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AVL55_09040 6e9a220f7d663b27a28c9d4a2b40f53c 270 Pfam PF03618 Kinase/pyrophosphorylase 5 260 2.3E-75 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AVL55_06115 7febf98545326df658c03d0f82eec837 99 Pfam PF05247 Flagellar transcriptional activator (FlhD) 5 79 4.7E-10 T 11-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AVL55_06115 7febf98545326df658c03d0f82eec837 99 Gene3D G3DSA:1.10.4000.10 1 97 1.8E-11 T 11-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily AVL55_06115 7febf98545326df658c03d0f82eec837 99 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 78 0.006 T 11-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AVL55_06115 7febf98545326df658c03d0f82eec837 99 SUPERFAMILY SSF63592 1 91 3.66E-22 T 11-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily AVL55_08225 8d64ad4aa93027469ce14037bc04050e 376 Gene3D G3DSA:3.40.50.2000 173 358 9.2E-36 T 11-10-2018 AVL55_08225 8d64ad4aa93027469ce14037bc04050e 376 SUPERFAMILY SSF53756 3 372 1.05E-43 T 11-10-2018 AVL55_08225 8d64ad4aa93027469ce14037bc04050e 376 Gene3D G3DSA:3.40.50.2000 14 367 9.2E-36 T 11-10-2018 AVL55_08225 8d64ad4aa93027469ce14037bc04050e 376 Pfam PF00534 Glycosyl transferases group 1 192 338 3.8E-22 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_06695 f121102e55fc0e2da367d8b961cac526 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 173 1.6E-48 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AVL55_06695 f121102e55fc0e2da367d8b961cac526 173 Pfam PF05239 PRC-barrel domain 95 168 8.5E-12 T 11-10-2018 IPR027275 PRC-barrel domain AVL55_06695 f121102e55fc0e2da367d8b961cac526 173 SUPERFAMILY SSF50447 6 91 7.95E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_06695 f121102e55fc0e2da367d8b961cac526 173 Gene3D G3DSA:2.40.30.60 1 91 3.9E-30 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AVL55_06695 f121102e55fc0e2da367d8b961cac526 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 173 23.037 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AVL55_06695 f121102e55fc0e2da367d8b961cac526 173 Gene3D G3DSA:2.30.30.240 92 173 1.5E-26 T 11-10-2018 AVL55_06695 f121102e55fc0e2da367d8b961cac526 173 Pfam PF01782 RimM N-terminal domain 10 87 1.2E-24 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 AVL55_06695 f121102e55fc0e2da367d8b961cac526 173 SUPERFAMILY SSF50346 98 173 2.94E-19 T 11-10-2018 IPR011033 PRC-barrel-like superfamily AVL55_10705 b44ec2d415679070d106ce073a620458 158 Pfam PF00034 Cytochrome c 34 131 2.1E-4 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_10705 b44ec2d415679070d106ce073a620458 158 Gene3D G3DSA:1.10.760.10 1 137 1.1E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_10705 b44ec2d415679070d106ce073a620458 158 SUPERFAMILY SSF46626 2 131 1.01E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_18010 d3733dd070aaa6b921ab7e34bf86af4a 243 SMART SM00052 3 237 1.4E-11 T 11-10-2018 IPR001633 EAL domain AVL55_18010 d3733dd070aaa6b921ab7e34bf86af4a 243 SUPERFAMILY SSF141868 7 234 5.75E-45 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_18010 d3733dd070aaa6b921ab7e34bf86af4a 243 Pfam PF00563 EAL domain 4 232 2.2E-42 T 11-10-2018 IPR001633 EAL domain AVL55_18010 d3733dd070aaa6b921ab7e34bf86af4a 243 Gene3D G3DSA:3.20.20.450 3 241 2.1E-45 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 SUPERFAMILY SSF46689 225 274 8.36E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 Gene3D G3DSA:1.10.10.60 221 328 9.8E-29 T 11-10-2018 AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 SUPERFAMILY SSF52317 7 204 3.47E-33 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 323 2.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 307 2.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 Gene3D G3DSA:3.40.50.880 1 212 1.1E-47 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 SMART SM00342 240 323 1.9E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 Pfam PF12833 Helix-turn-helix domain 246 324 1.4E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 Pfam PF01965 DJ-1/PfpI family 46 166 3.3E-12 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AVL55_11455 e327de1e1811e314a0e6fb4515abb26b 329 SUPERFAMILY SSF46689 276 326 2.24E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_13460 19834e2e84bff96fca361c9ac4b10bae 290 Gene3D G3DSA:3.10.129.10 26 286 8.0E-56 T 11-10-2018 AVL55_13460 19834e2e84bff96fca361c9ac4b10bae 290 PRINTS PR01483 Fatty acid synthase signature 180 202 1.9E-6 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AVL55_13460 19834e2e84bff96fca361c9ac4b10bae 290 PRINTS PR01483 Fatty acid synthase signature 202 223 1.9E-6 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AVL55_13460 19834e2e84bff96fca361c9ac4b10bae 290 SUPERFAMILY SSF54637 179 284 5.97E-22 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_13460 19834e2e84bff96fca361c9ac4b10bae 290 Pfam PF01575 MaoC like domain 180 263 2.7E-19 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 Gene3D G3DSA:3.40.190.10 163 261 2.9E-60 T 11-10-2018 AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 SUPERFAMILY SSF46785 2 85 1.82E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.5E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 Gene3D G3DSA:3.40.190.10 103 288 2.9E-60 T 11-10-2018 AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 Gene3D G3DSA:1.10.10.10 7 93 4.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 Pfam PF03466 LysR substrate binding domain 91 290 2.4E-35 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_07675 5790d27631bdb62934a10961c43ee5ed 300 SUPERFAMILY SSF53850 91 295 1.47E-34 T 11-10-2018 AVL55_14130 b3aabb3429c42e6c63446c9a1950e639 279 Pfam PF11959 Domain of unknown function (DUF3473) 150 276 8.0E-45 T 11-10-2018 IPR022560 Domain of unknown function DUF3473 AVL55_14130 b3aabb3429c42e6c63446c9a1950e639 279 Pfam PF01522 Polysaccharide deacetylase 40 148 1.9E-21 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AVL55_14130 b3aabb3429c42e6c63446c9a1950e639 279 Gene3D G3DSA:3.20.20.370 7 278 6.4E-46 T 11-10-2018 AVL55_14130 b3aabb3429c42e6c63446c9a1950e639 279 SUPERFAMILY SSF88713 10 253 5.68E-46 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AVL55_14130 b3aabb3429c42e6c63446c9a1950e639 279 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 8 274 2.8E-122 T 11-10-2018 IPR014344 PEP-CTERM locus, polysaccharide deactylase AVL55_02925 5916aaf0c56c7e55bab0871cb64775e3 106 Gene3D G3DSA:3.30.300.90 1 89 9.6E-31 T 11-10-2018 AVL55_02925 5916aaf0c56c7e55bab0871cb64775e3 106 SUPERFAMILY SSF82657 4 88 1.02E-27 T 11-10-2018 IPR036065 BolA-like superfamily AVL55_02925 5916aaf0c56c7e55bab0871cb64775e3 106 PIRSF PIRSF003113 1 100 5.4E-31 T 11-10-2018 IPR002634 BolA protein AVL55_02925 5916aaf0c56c7e55bab0871cb64775e3 106 Pfam PF01722 BolA-like protein 11 84 8.9E-28 T 11-10-2018 IPR002634 BolA protein AVL55_01670 d0d1bab2e0a1c9aa9da237db6a4f7abb 729 Gene3D G3DSA:1.10.1370.10 188 651 6.1E-208 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AVL55_01670 d0d1bab2e0a1c9aa9da237db6a4f7abb 729 SUPERFAMILY SSF55486 55 720 1.26E-173 T 11-10-2018 AVL55_01670 d0d1bab2e0a1c9aa9da237db6a4f7abb 729 Pfam PF01432 Peptidase family M3 270 719 3.3E-102 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AVL55_01670 d0d1bab2e0a1c9aa9da237db6a4f7abb 729 Gene3D G3DSA:1.10.1370.40 62 718 6.1E-208 T 11-10-2018 AVL55_14070 ca44898316492a9233b05594e6a540bb 323 Gene3D G3DSA:3.90.550.10 1 274 1.6E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_14070 ca44898316492a9233b05594e6a540bb 323 SUPERFAMILY SSF53448 3 228 7.96E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_14070 ca44898316492a9233b05594e6a540bb 323 Pfam PF00535 Glycosyl transferase family 2 6 115 1.1E-31 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_07980 88713645ffb705a594a8d66946f85ca9 332 Hamap MF_01962 Adenine deaminase. 6 318 79.16 T 11-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AVL55_07980 88713645ffb705a594a8d66946f85ca9 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 11 329 2.0E-112 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AVL55_07980 88713645ffb705a594a8d66946f85ca9 332 Pfam PF00962 Adenosine/AMP deaminase 9 327 2.4E-72 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AVL55_07980 88713645ffb705a594a8d66946f85ca9 332 Gene3D G3DSA:3.20.20.140 2 332 7.6E-105 T 11-10-2018 AVL55_07980 88713645ffb705a594a8d66946f85ca9 332 SUPERFAMILY SSF51556 6 329 6.22E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_01295 196905f162d7ed549a6c18bf4bd07a21 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 206 281 4.4E-10 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_01295 196905f162d7ed549a6c18bf4bd07a21 393 SUPERFAMILY SSF111369 165 309 5.23E-9 T 11-10-2018 AVL55_01295 196905f162d7ed549a6c18bf4bd07a21 393 Pfam PF13533 Biotin-lipoyl like 170 203 6.9E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AVL55_01295 196905f162d7ed549a6c18bf4bd07a21 393 Gene3D G3DSA:2.40.50.100 168 201 2.2E-10 T 11-10-2018 AVL55_01295 196905f162d7ed549a6c18bf4bd07a21 393 Gene3D G3DSA:2.40.50.100 206 238 1.7E-22 T 11-10-2018 AVL55_01295 196905f162d7ed549a6c18bf4bd07a21 393 Gene3D G3DSA:2.40.30.170 154 167 2.2E-10 T 11-10-2018 AVL55_01295 196905f162d7ed549a6c18bf4bd07a21 393 Gene3D G3DSA:2.40.30.170 239 314 1.7E-22 T 11-10-2018 AVL55_01295 196905f162d7ed549a6c18bf4bd07a21 393 Gene3D G3DSA:2.40.420.20 142 153 2.2E-10 T 11-10-2018 AVL55_01295 196905f162d7ed549a6c18bf4bd07a21 393 Gene3D G3DSA:2.40.420.20 315 370 1.7E-22 T 11-10-2018 AVL55_14085 5d047a8dd9fea6f109e1b35e3a0b0d2f 276 Pfam PF04230 Polysaccharide pyruvyl transferase 110 192 1.0E-5 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 Pfam PF01817 Chorismate mutase type II 15 92 1.8E-19 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 PIRSF PIRSF001499 7 380 2.6E-142 T 11-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 SMART SM00830 15 95 1.9E-30 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 Gene3D G3DSA:1.10.3660.10 255 380 3.3E-44 T 11-10-2018 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 Pfam PF02153 Prephenate dehydrogenase 146 350 3.9E-29 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 SUPERFAMILY SSF48179 248 372 3.29E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 Gene3D G3DSA:3.40.50.720 87 253 9.8E-39 T 11-10-2018 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 SUPERFAMILY SSF48600 7 94 2.75E-23 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 TIGRFAM TIGR01799 CM_T: chorismate mutase 11 92 5.3E-33 T 11-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 Gene3D G3DSA:1.20.59.10 3 86 4.2E-17 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AVL55_06725 79e9ad33b7907c0375940abea2640b91 384 SUPERFAMILY SSF51735 97 244 2.79E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_05640 e6e45ab1986ddf64dced4f3b2b00b478 322 Gene3D G3DSA:1.20.58.1130 9 205 5.4E-89 T 11-10-2018 AVL55_05640 e6e45ab1986ddf64dced4f3b2b00b478 322 Gene3D G3DSA:1.20.1420.30 35 310 5.4E-89 T 11-10-2018 AVL55_05640 e6e45ab1986ddf64dced4f3b2b00b478 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 6 313 2.6E-72 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AVL55_05640 e6e45ab1986ddf64dced4f3b2b00b478 322 Pfam PF01699 Sodium/calcium exchanger protein 6 143 4.4E-26 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AVL55_05640 e6e45ab1986ddf64dced4f3b2b00b478 322 Pfam PF01699 Sodium/calcium exchanger protein 173 315 3.0E-31 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AVL55_10510 fecd46ad81c6249abbf944a3987eb4ca 69 SUPERFAMILY SSF47413 1 58 7.95E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_10510 fecd46ad81c6249abbf944a3987eb4ca 69 Gene3D G3DSA:1.10.260.40 1 68 3.2E-13 T 11-10-2018 AVL55_01960 d41620fe3c49d36dd61535560b0f6260 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 178 245 2.6E-8 T 11-10-2018 AVL55_01960 d41620fe3c49d36dd61535560b0f6260 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 67 128 4.5E-7 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_01960 d41620fe3c49d36dd61535560b0f6260 285 SUPERFAMILY SSF52833 43 132 3.27E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_01960 d41620fe3c49d36dd61535560b0f6260 285 Gene3D G3DSA:1.20.1050.10 134 250 3.0E-106 T 11-10-2018 AVL55_01960 d41620fe3c49d36dd61535560b0f6260 285 Gene3D G3DSA:3.40.30.10 19 256 3.0E-106 T 11-10-2018 AVL55_01960 d41620fe3c49d36dd61535560b0f6260 285 SUPERFAMILY SSF47616 118 259 3.68E-33 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_06095 438d2b57ff4676b5a4bdb77eb8b9ab37 462 Pfam PF06122 Conjugative relaxosome accessory transposon protein 28 388 5.4E-108 T 11-10-2018 IPR010927 Type IV conjugative transfer system protein TraH AVL55_08885 4fd7cc427477a621a5b78b0c4a162c8d 270 Gene3D G3DSA:1.20.5.170 208 247 1.8E-5 T 11-10-2018 AVL55_08885 4fd7cc427477a621a5b78b0c4a162c8d 270 SUPERFAMILY SSF57997 80 248 4.25E-6 T 11-10-2018 AVL55_18340 a41c5d64fda8f0c294c5ab14e16d0852 127 SUPERFAMILY SSF54593 1 126 5.37E-34 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_18340 a41c5d64fda8f0c294c5ab14e16d0852 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 1.4E-20 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AVL55_18340 a41c5d64fda8f0c294c5ab14e16d0852 127 Gene3D G3DSA:3.10.180.10 7 126 1.2E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_04525 abb804a860c8e83855dc340a6a08c3aa 237 Pfam PF00665 Integrase core domain 93 205 4.8E-22 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AVL55_04525 abb804a860c8e83855dc340a6a08c3aa 237 SUPERFAMILY SSF53098 94 235 1.35E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_04525 abb804a860c8e83855dc340a6a08c3aa 237 Gene3D G3DSA:3.30.420.10 86 235 4.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 Gene3D G3DSA:3.90.228.20 208 507 6.0E-204 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 244 259 - T 11-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 SUPERFAMILY SSF53795 207 518 2.38E-128 T 11-10-2018 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 Gene3D G3DSA:2.170.8.10 34 323 6.0E-204 T 11-10-2018 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 PIRSF PIRSF006294 1 520 2.0E-215 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 Gene3D G3DSA:3.40.449.10 24 207 6.0E-204 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 20 518 1.8E-190 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 SUPERFAMILY SSF68923 17 206 4.71E-71 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 8 520 51.764 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AVL55_19315 fe2af342171395df66c08bb1fec5939c 520 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 474 3.1E-195 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AVL55_12120 cfee94c3667d275e72c871169010e5da 214 Gene3D G3DSA:3.20.20.70 1 213 1.2E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_12120 cfee94c3667d275e72c871169010e5da 214 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 41 50 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AVL55_12120 cfee94c3667d275e72c871169010e5da 214 Pfam PF01081 KDPG and KHG aldolase 11 204 5.6E-81 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AVL55_12120 cfee94c3667d275e72c871169010e5da 214 SUPERFAMILY SSF51569 6 210 1.08E-70 T 11-10-2018 AVL55_12120 cfee94c3667d275e72c871169010e5da 214 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 210 1.4E-81 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AVL55_12120 cfee94c3667d275e72c871169010e5da 214 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 129 142 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AVL55_02265 dfe3ca4ae3d9b730fce4d9b9b70a78e4 702 Pfam PF00326 Prolyl oligopeptidase family 488 696 2.4E-51 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_02265 dfe3ca4ae3d9b730fce4d9b9b70a78e4 702 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 211 302 3.2E-9 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AVL55_02265 dfe3ca4ae3d9b730fce4d9b9b70a78e4 702 Gene3D G3DSA:2.120.10.30 58 263 7.2E-20 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_02265 dfe3ca4ae3d9b730fce4d9b9b70a78e4 702 Gene3D G3DSA:2.120.10.30 264 449 1.2E-15 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_02265 dfe3ca4ae3d9b730fce4d9b9b70a78e4 702 SUPERFAMILY SSF53474 448 695 4.53E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_02265 dfe3ca4ae3d9b730fce4d9b9b70a78e4 702 SUPERFAMILY SSF82171 67 442 1.83E-40 T 11-10-2018 AVL55_02265 dfe3ca4ae3d9b730fce4d9b9b70a78e4 702 Gene3D G3DSA:3.40.50.1820 450 701 4.0E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 144 512 1.7E-120 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 Gene3D G3DSA:3.30.70.420 240 354 1.0E-110 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 SUPERFAMILY SSF56542 136 501 1.83E-66 T 11-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 SUPERFAMILY SSF55035 241 354 1.14E-38 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 175 196 1.5E-38 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 295 313 1.5E-38 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 437 458 1.5E-38 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 206 226 1.5E-38 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 335 360 1.5E-38 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_17785 82b5676c43eb91044dbfde4d362c087d 514 Gene3D G3DSA:3.90.770.10 186 498 1.0E-110 T 11-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_07015 7d0a5412fea506dcc1a1b8d40b7bf534 495 Gene3D G3DSA:3.30.1490.20 306 372 1.7E-9 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_07015 7d0a5412fea506dcc1a1b8d40b7bf534 495 Pfam PF08443 RimK-like ATP-grasp domain 297 467 1.0E-10 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AVL55_07015 7d0a5412fea506dcc1a1b8d40b7bf534 495 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 25 167 9.7E-32 T 11-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain AVL55_07015 7d0a5412fea506dcc1a1b8d40b7bf534 495 SUPERFAMILY SSF56059 281 489 3.91E-41 T 11-10-2018 AVL55_07015 7d0a5412fea506dcc1a1b8d40b7bf534 495 Gene3D G3DSA:3.30.470.20 373 489 5.4E-21 T 11-10-2018 AVL55_07015 7d0a5412fea506dcc1a1b8d40b7bf534 495 Gene3D G3DSA:3.40.50.20 218 304 3.2E-5 T 11-10-2018 AVL55_09460 d8b6b67d546157c665f7e1f66353af3a 554 Gene3D G3DSA:1.25.40.10 60 294 1.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_09460 d8b6b67d546157c665f7e1f66353af3a 554 SUPERFAMILY SSF81901 118 272 3.92E-7 T 11-10-2018 AVL55_15395 a4cf0bef100f56c3dec0ecb8456461b0 143 SUPERFAMILY SSF53098 8 138 1.02E-40 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_15395 a4cf0bef100f56c3dec0ecb8456461b0 143 Pfam PF03652 Holliday junction resolvase 8 137 2.2E-40 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AVL55_15395 a4cf0bef100f56c3dec0ecb8456461b0 143 Gene3D G3DSA:3.30.420.140 5 142 2.0E-42 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AVL55_15395 a4cf0bef100f56c3dec0ecb8456461b0 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 10 138 8.9E-50 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AVL55_15395 a4cf0bef100f56c3dec0ecb8456461b0 143 SMART SM00732 7 107 6.0E-38 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AVL55_15395 a4cf0bef100f56c3dec0ecb8456461b0 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 7 142 24.043 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AVL55_05375 25a8576cf7f2a70188fb57c6917e5c32 331 Gene3D G3DSA:3.40.50.300 2 330 5.9E-66 T 11-10-2018 AVL55_05375 25a8576cf7f2a70188fb57c6917e5c32 331 SUPERFAMILY SSF52540 3 259 2.83E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05375 25a8576cf7f2a70188fb57c6917e5c32 331 SMART SM00382 32 239 1.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_05375 25a8576cf7f2a70188fb57c6917e5c32 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 306 1.7E-14 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AVL55_05375 25a8576cf7f2a70188fb57c6917e5c32 331 Pfam PF00005 ABC transporter 23 187 1.8E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_05375 25a8576cf7f2a70188fb57c6917e5c32 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 1.4E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 SUPERFAMILY SSF49785 12 175 1.98E-41 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 Gene3D G3DSA:2.60.120.260 23 175 4.7E-42 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 PRINTS PR00132 Glycosyl hydrolase family 2 signature 308 322 6.8E-11 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 PRINTS PR00132 Glycosyl hydrolase family 2 signature 99 114 6.8E-11 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 PRINTS PR00132 Glycosyl hydrolase family 2 signature 404 419 6.8E-11 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 PRINTS PR00132 Glycosyl hydrolase family 2 signature 339 357 6.8E-11 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 Gene3D G3DSA:2.60.40.10 589 677 3.5E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 Pfam PF16355 Domain of unknown function (DUF4982) 601 667 1.7E-8 T 11-10-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 Gene3D G3DSA:2.60.40.10 181 296 1.6E-24 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 SUPERFAMILY SSF51445 293 574 3.38E-46 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 Pfam PF00703 Glycosyl hydrolases family 2 193 296 2.5E-18 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 Gene3D G3DSA:3.20.20.80 299 579 2.5E-46 T 11-10-2018 AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 SUPERFAMILY SSF49303 188 295 2.19E-18 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 303 432 2.2E-18 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AVL55_01025 b0eca10ceec0ecedac5becbec18f7145 772 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 29 176 1.8E-22 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AVL55_09375 495a9f536ac7481408a54ab405fa1dd6 316 Gene3D G3DSA:2.30.30.60 118 174 8.9E-8 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AVL55_09375 495a9f536ac7481408a54ab405fa1dd6 316 Pfam PF00924 Mechanosensitive ion channel 69 178 1.2E-15 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_09375 495a9f536ac7481408a54ab405fa1dd6 316 SUPERFAMILY SSF50182 103 174 3.6E-12 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_03160 337cca8dd317fe0373cc9ab4e51df63a 564 Pfam PF03571 Peptidase family M49 186 394 5.6E-14 T 11-10-2018 IPR039461 Peptidase family M49 AVL55_03160 337cca8dd317fe0373cc9ab4e51df63a 564 Gene3D G3DSA:1.20.120.1470 158 282 1.3E-5 T 11-10-2018 AVL55_18575 2f58e97a3fd7ea1fa672de26700f53be 145 Pfam PF01894 Uncharacterised protein family UPF0047 23 138 6.2E-36 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AVL55_18575 2f58e97a3fd7ea1fa672de26700f53be 145 Gene3D G3DSA:2.60.120.460 6 142 2.3E-38 T 11-10-2018 IPR035917 YjbQ-like superfamily AVL55_18575 2f58e97a3fd7ea1fa672de26700f53be 145 PIRSF PIRSF004681 3 143 5.1E-41 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AVL55_18575 2f58e97a3fd7ea1fa672de26700f53be 145 SUPERFAMILY SSF111038 6 142 1.57E-44 T 11-10-2018 IPR035917 YjbQ-like superfamily AVL55_18575 2f58e97a3fd7ea1fa672de26700f53be 145 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 18 142 1.4E-42 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AVL55_07085 22a262beab602162977e207cfda8adf1 332 Gene3D G3DSA:1.20.120.620 1 107 1.4E-17 T 11-10-2018 IPR038318 KdpD, transmembrane domain superfamily AVL55_07085 22a262beab602162977e207cfda8adf1 332 Pfam PF00512 His Kinase A (phospho-acceptor) domain 118 183 4.1E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_07085 22a262beab602162977e207cfda8adf1 332 Gene3D G3DSA:3.30.565.10 189 332 4.8E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_07085 22a262beab602162977e207cfda8adf1 332 Gene3D G3DSA:1.10.287.130 108 183 2.1E-13 T 11-10-2018 AVL55_07085 22a262beab602162977e207cfda8adf1 332 SMART SM00387 224 332 4.4E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_07085 22a262beab602162977e207cfda8adf1 332 SUPERFAMILY SSF55874 173 330 1.17E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_07085 22a262beab602162977e207cfda8adf1 332 SUPERFAMILY SSF47384 106 184 3.14E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_07085 22a262beab602162977e207cfda8adf1 332 SMART SM00388 116 184 1.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_07085 22a262beab602162977e207cfda8adf1 332 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 227 329 4.9E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_07085 22a262beab602162977e207cfda8adf1 332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 5.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_07085 22a262beab602162977e207cfda8adf1 332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 311 5.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_07085 22a262beab602162977e207cfda8adf1 332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 259 273 5.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_07085 22a262beab602162977e207cfda8adf1 332 Pfam PF13493 Domain of unknown function (DUF4118) 10 110 7.2E-22 T 11-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain AVL55_01900 2c0c901986f1a1887d283288123d0631 293 PIRSF PIRSF000398 3 277 2.7E-66 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AVL55_01900 2c0c901986f1a1887d283288123d0631 293 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 12 252 3.1E-67 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AVL55_01900 2c0c901986f1a1887d283288123d0631 293 Gene3D G3DSA:3.40.50.150 9 241 2.2E-85 T 11-10-2018 AVL55_01900 2c0c901986f1a1887d283288123d0631 293 SUPERFAMILY SSF53335 7 270 6.65E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_01900 2c0c901986f1a1887d283288123d0631 293 Gene3D G3DSA:1.10.1020.10 59 158 2.2E-85 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AVL55_01900 2c0c901986f1a1887d283288123d0631 293 TIGRFAM TIGR00571 dam: DNA adenine methylase 7 269 6.0E-91 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AVL55_01900 2c0c901986f1a1887d283288123d0631 293 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AVL55_01900 2c0c901986f1a1887d283288123d0631 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 33 47 4.9E-19 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AVL55_01900 2c0c901986f1a1887d283288123d0631 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 52 65 4.9E-19 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AVL55_01900 2c0c901986f1a1887d283288123d0631 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 12 28 4.9E-19 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AVL55_01900 2c0c901986f1a1887d283288123d0631 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 177 189 4.9E-19 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AVL55_07195 fe7f6345cfcb6a4d0f9b590b5ff78c7c 312 PIRSF PIRSF006621 1 311 2.5E-77 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AVL55_07195 fe7f6345cfcb6a4d0f9b590b5ff78c7c 312 Pfam PF01207 Dihydrouridine synthase (Dus) 4 289 5.6E-73 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AVL55_07195 fe7f6345cfcb6a4d0f9b590b5ff78c7c 312 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 53.65 T 11-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AVL55_07195 fe7f6345cfcb6a4d0f9b590b5ff78c7c 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AVL55_07195 fe7f6345cfcb6a4d0f9b590b5ff78c7c 312 SUPERFAMILY SSF51395 1 307 2.93E-69 T 11-10-2018 AVL55_07195 fe7f6345cfcb6a4d0f9b590b5ff78c7c 312 Gene3D G3DSA:3.20.20.70 1 240 2.4E-78 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07195 fe7f6345cfcb6a4d0f9b590b5ff78c7c 312 Gene3D G3DSA:1.20.225.30 242 311 2.0E-22 T 11-10-2018 AVL55_09660 4ce4de28b6f807fd5a135cdd5cee1f06 650 SMART SM00642 73 511 1.4E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_09660 4ce4de28b6f807fd5a135cdd5cee1f06 650 SUPERFAMILY SSF51445 67 549 1.11E-85 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_09660 4ce4de28b6f807fd5a135cdd5cee1f06 650 Gene3D G3DSA:3.20.20.80 307 540 2.7E-39 T 11-10-2018 AVL55_09660 4ce4de28b6f807fd5a135cdd5cee1f06 650 Gene3D G3DSA:3.20.20.80 35 271 8.3E-26 T 11-10-2018 AVL55_09660 4ce4de28b6f807fd5a135cdd5cee1f06 650 Pfam PF00128 Alpha amylase, catalytic domain 108 490 1.9E-23 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_00140 792ae666793270f34785f110c40cbb3a 143 Pfam PF01152 Bacterial-like globin 23 140 1.9E-31 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 AVL55_00140 792ae666793270f34785f110c40cbb3a 143 SUPERFAMILY SSF46458 21 141 3.24E-32 T 11-10-2018 IPR009050 Globin-like superfamily AVL55_00140 792ae666793270f34785f110c40cbb3a 143 Gene3D G3DSA:1.10.490.10 16 143 4.4E-40 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AVL55_00040 f9e5466cb37502550f01c7c1ba48dc14 202 SUPERFAMILY SSF48150 14 195 3.14E-77 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AVL55_00040 f9e5466cb37502550f01c7c1ba48dc14 202 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 15 193 3.0E-74 T 11-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AVL55_00040 f9e5466cb37502550f01c7c1ba48dc14 202 Gene3D G3DSA:1.10.340.30 13 197 8.9E-81 T 11-10-2018 AVL55_00040 f9e5466cb37502550f01c7c1ba48dc14 202 Pfam PF03352 Methyladenine glycosylase 18 192 2.2E-76 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AVL55_06055 ce44d71373475cc1c84a8cfa152c082b 551 Pfam PF06213 Cobalamin biosynthesis protein CobT 4 261 1.3E-13 T 11-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 AVL55_06055 ce44d71373475cc1c84a8cfa152c082b 551 SMART SM00327 376 549 1.7E-6 T 11-10-2018 IPR002035 von Willebrand factor, type A AVL55_06055 ce44d71373475cc1c84a8cfa152c082b 551 SUPERFAMILY SSF53300 377 524 2.08E-16 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_06055 ce44d71373475cc1c84a8cfa152c082b 551 Gene3D G3DSA:3.40.50.410 374 547 6.7E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_06055 ce44d71373475cc1c84a8cfa152c082b 551 Pfam PF00092 von Willebrand factor type A domain 381 520 1.1E-6 T 11-10-2018 IPR002035 von Willebrand factor, type A AVL55_04030 f8867089f6c626f7d1ee1a0156a55d9a 325 Gene3D G3DSA:3.40.50.12370 1 325 4.0E-84 T 11-10-2018 AVL55_04030 f8867089f6c626f7d1ee1a0156a55d9a 325 SUPERFAMILY SSF52402 150 321 5.19E-19 T 11-10-2018 AVL55_04030 f8867089f6c626f7d1ee1a0156a55d9a 325 Pfam PF00582 Universal stress protein family 178 314 2.4E-12 T 11-10-2018 IPR006016 UspA AVL55_04030 f8867089f6c626f7d1ee1a0156a55d9a 325 Pfam PF00582 Universal stress protein family 4 142 8.4E-14 T 11-10-2018 IPR006016 UspA AVL55_04030 f8867089f6c626f7d1ee1a0156a55d9a 325 SUPERFAMILY SSF52402 4 143 7.03E-19 T 11-10-2018 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 42.474 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 Pfam PF00472 RF-1 domain 216 323 2.8E-43 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 Gene3D G3DSA:3.30.70.1660 113 344 1.8E-98 T 11-10-2018 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 SUPERFAMILY SSF75620 12 355 1.15E-142 T 11-10-2018 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 Gene3D G3DSA:3.30.160.20 212 299 1.8E-98 T 11-10-2018 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 SMART SM00937 67 180 3.5E-71 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 2.1E-174 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 Pfam PF03462 PCRF domain 13 205 4.0E-78 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AVL55_07645 5981bafb2ff797786438a4c5fa6d0877 361 Gene3D G3DSA:1.20.58.410 4 103 1.4E-9 T 11-10-2018 AVL55_00595 ba23cc7eef3a5b1e5f55e3e5bce500a0 157 SUPERFAMILY SSF52833 1 157 1.64E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_00595 ba23cc7eef3a5b1e5f55e3e5bce500a0 157 Pfam PF08534 Redoxin 12 154 4.1E-32 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AVL55_00595 ba23cc7eef3a5b1e5f55e3e5bce500a0 157 Gene3D G3DSA:3.40.30.10 3 157 1.0E-55 T 11-10-2018 AVL55_14580 85e4edb22e9105ccc96fae79f7cbaad6 191 Pfam PF13590 Domain of unknown function (DUF4136) 39 188 1.2E-12 T 11-10-2018 IPR025411 Domain of unknown function DUF4136 AVL55_14580 85e4edb22e9105ccc96fae79f7cbaad6 191 Gene3D G3DSA:3.30.160.670 28 189 3.3E-11 T 11-10-2018 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 Gene3D G3DSA:3.30.70.2250 44 111 1.1E-29 T 11-10-2018 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 SMART SM00486 157 564 7.0E-49 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 Gene3D G3DSA:3.90.1600.10 467 638 1.5E-44 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 Gene3D G3DSA:3.90.1600.10 359 449 1.9E-23 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 Gene3D G3DSA:2.40.50.590 9 154 1.1E-29 T 11-10-2018 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 ProSitePatterns PS00116 DNA polymerase family B signature. 552 560 - T 11-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 SUPERFAMILY SSF53098 7 399 1.01E-59 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 SUPERFAMILY SSF56672 397 784 1.28E-109 T 11-10-2018 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 426 439 1.5E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 498 510 1.5E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 550 558 1.5E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 Gene3D G3DSA:3.30.420.10 160 358 1.1E-59 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 79 308 6.8E-18 T 11-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 Pfam PF00136 DNA polymerase family B 408 746 1.5E-35 T 11-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_16655 e8b6da58a5825215be61b159a9e641f8 789 Gene3D G3DSA:1.10.132.60 645 789 6.2E-55 T 11-10-2018 AVL55_02250 ec74e970e84cffd648f40f9c26e8123b 181 SUPERFAMILY SSF110087 45 173 8.37E-41 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AVL55_02250 ec74e970e84cffd648f40f9c26e8123b 181 Gene3D G3DSA:2.60.40.1890 57 175 1.1E-34 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AVL55_02250 ec74e970e84cffd648f40f9c26e8123b 181 Pfam PF04314 Copper chaperone PCu(A)C 55 165 1.5E-32 T 11-10-2018 IPR007410 Copper chaperone PCuAC AVL55_11480 3cae41e5a9c547ddcdd9bb5aaae9cef8 411 Gene3D G3DSA:1.10.287.470 106 180 5.3E-54 T 11-10-2018 AVL55_11480 3cae41e5a9c547ddcdd9bb5aaae9cef8 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 378 2.6E-43 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_11480 3cae41e5a9c547ddcdd9bb5aaae9cef8 411 Gene3D G3DSA:2.40.420.20 312 377 5.3E-54 T 11-10-2018 AVL55_11480 3cae41e5a9c547ddcdd9bb5aaae9cef8 411 Gene3D G3DSA:2.40.50.100 69 214 5.3E-54 T 11-10-2018 AVL55_11480 3cae41e5a9c547ddcdd9bb5aaae9cef8 411 SUPERFAMILY SSF111369 60 304 4.32E-23 T 11-10-2018 AVL55_11480 3cae41e5a9c547ddcdd9bb5aaae9cef8 411 Pfam PF13437 HlyD family secretion protein 184 290 1.3E-12 T 11-10-2018 AVL55_11480 3cae41e5a9c547ddcdd9bb5aaae9cef8 411 Gene3D G3DSA:2.40.30.170 59 311 5.3E-54 T 11-10-2018 AVL55_09030 068702f9fc7fc8c017cefd81ff297fdb 903 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 158 3.5E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_09030 068702f9fc7fc8c017cefd81ff297fdb 903 SUPERFAMILY SSF56935 22 902 2.22E-98 T 11-10-2018 AVL55_09030 068702f9fc7fc8c017cefd81ff297fdb 903 Gene3D G3DSA:2.170.130.10 20 166 6.7E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_09030 068702f9fc7fc8c017cefd81ff297fdb 903 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 11-10-2018 IPR010916 TonB box, conserved site AVL55_09030 068702f9fc7fc8c017cefd81ff297fdb 903 Pfam PF00593 TonB dependent receptor 306 900 1.5E-33 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_16195 59df9f8493a3e236baae559d56e7b406 395 SUPERFAMILY SSF116734 214 395 4.91E-32 T 11-10-2018 AVL55_16195 59df9f8493a3e236baae559d56e7b406 395 Pfam PF01420 Type I restriction modification DNA specificity domain 81 189 1.3E-6 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AVL55_16195 59df9f8493a3e236baae559d56e7b406 395 Pfam PF01420 Type I restriction modification DNA specificity domain 215 380 3.9E-9 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AVL55_16195 59df9f8493a3e236baae559d56e7b406 395 SUPERFAMILY SSF116734 6 209 7.36E-23 T 11-10-2018 AVL55_16195 59df9f8493a3e236baae559d56e7b406 395 Gene3D G3DSA:3.90.220.20 56 156 5.1E-48 T 11-10-2018 AVL55_16195 59df9f8493a3e236baae559d56e7b406 395 Gene3D G3DSA:3.90.220.20 217 352 5.1E-48 T 11-10-2018 AVL55_16195 59df9f8493a3e236baae559d56e7b406 395 Gene3D G3DSA:1.10.287.1120 157 393 5.1E-48 T 11-10-2018 AVL55_08165 df57278d41b8a3bcb4838d0194afd1f3 242 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 80 188 9.8E-14 T 11-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AVL55_08165 df57278d41b8a3bcb4838d0194afd1f3 242 Gene3D G3DSA:3.10.620.30 42 233 5.4E-73 T 11-10-2018 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 147 357 7.0E-55 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 123 3.4E-25 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 265 279 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 Gene3D G3DSA:3.30.360.10 142 354 7.4E-81 T 11-10-2018 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 SUPERFAMILY SSF51735 4 150 4.69E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 SMART SM00859 5 125 9.1E-31 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 PIRSF PIRSF000148 3 374 3.2E-68 T 11-10-2018 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 SUPERFAMILY SSF55347 137 358 5.92E-77 T 11-10-2018 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 Gene3D G3DSA:3.40.50.720 3 141 2.8E-59 T 11-10-2018 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 371 33.247 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_06915 1be53c2e0e403f283ef217fc72c01e2e 374 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 5 370 4.0E-191 T 11-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_07510 a7f9554f417e93568b4774c28ca308f1 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 118 128 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AVL55_07510 a7f9554f417e93568b4774c28ca308f1 158 SUPERFAMILY SSF55486 24 154 7.81E-49 T 11-10-2018 AVL55_07510 a7f9554f417e93568b4774c28ca308f1 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 152 23.863 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AVL55_07510 a7f9554f417e93568b4774c28ca308f1 158 Pfam PF02130 Uncharacterized protein family UPF0054 27 147 9.1E-40 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AVL55_07510 a7f9554f417e93568b4774c28ca308f1 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 44 149 6.8E-38 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AVL55_07510 a7f9554f417e93568b4774c28ca308f1 158 Gene3D G3DSA:3.40.390.30 2 157 3.0E-53 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AVL55_10410 a9677266f8f25f7492ddcdba7ea78013 527 Gene3D G3DSA:3.40.50.300 238 523 6.5E-55 T 11-10-2018 AVL55_10410 a9677266f8f25f7492ddcdba7ea78013 527 SUPERFAMILY SSF52540 120 519 2.93E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_10410 a9677266f8f25f7492ddcdba7ea78013 527 Pfam PF00437 Type II/IV secretion system protein 232 388 4.8E-26 T 11-10-2018 IPR001482 Type II/IV secretion system protein AVL55_07760 dd85db5a1604ac25cbd418d4f7dc4467 108 SUPERFAMILY SSF117782 1 106 1.96E-38 T 11-10-2018 IPR035439 UPF0145 domain superfamily AVL55_07760 dd85db5a1604ac25cbd418d4f7dc4467 108 Pfam PF01906 Putative heavy-metal-binding 1 104 1.9E-40 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AVL55_07760 dd85db5a1604ac25cbd418d4f7dc4467 108 Gene3D G3DSA:3.30.110.70 2 106 4.7E-43 T 11-10-2018 AVL55_07760 dd85db5a1604ac25cbd418d4f7dc4467 108 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.324 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AVL55_17995 ea570cfa9980c647fb9e45001c91d062 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 2.8E-110 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AVL55_17995 ea570cfa9980c647fb9e45001c91d062 264 Gene3D G3DSA:3.20.20.60 1 264 4.0E-109 T 11-10-2018 AVL55_17995 ea570cfa9980c647fb9e45001c91d062 264 PIRSF PIRSF000388 1 264 3.2E-103 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AVL55_17995 ea570cfa9980c647fb9e45001c91d062 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.869 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AVL55_17995 ea570cfa9980c647fb9e45001c91d062 264 SUPERFAMILY SSF51621 3 263 1.84E-107 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AVL55_17995 ea570cfa9980c647fb9e45001c91d062 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 3.4E-112 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AVL55_12780 42e2e7a052c7b12c57283cf3d8da2b14 411 Pfam PF13975 gag-polyprotein putative aspartyl protease 304 393 1.4E-16 T 11-10-2018 AVL55_12780 42e2e7a052c7b12c57283cf3d8da2b14 411 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 309 320 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AVL55_12780 42e2e7a052c7b12c57283cf3d8da2b14 411 Gene3D G3DSA:2.40.70.10 280 409 1.8E-22 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AVL55_12780 42e2e7a052c7b12c57283cf3d8da2b14 411 SUPERFAMILY SSF50630 294 398 1.82E-11 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AVL55_10925 434f65fac40e5cc5a2c85f7e43d46a83 122 SUPERFAMILY SSF75169 1 122 3.2E-27 T 11-10-2018 IPR027396 DsrEFH-like AVL55_10925 434f65fac40e5cc5a2c85f7e43d46a83 122 Gene3D G3DSA:3.40.1260.10 1 122 9.9E-33 T 11-10-2018 IPR027396 DsrEFH-like AVL55_10925 434f65fac40e5cc5a2c85f7e43d46a83 122 Pfam PF02635 DsrE/DsrF-like family 4 122 1.4E-15 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AVL55_18550 d0987f5b178687678ce526dabd2c91d5 363 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 15 358 50.138 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AVL55_18550 d0987f5b178687678ce526dabd2c91d5 363 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 18 356 6.8E-138 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AVL55_18550 d0987f5b178687678ce526dabd2c91d5 363 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 31 40 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AVL55_18550 d0987f5b178687678ce526dabd2c91d5 363 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 14 356 1.4E-141 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AVL55_18550 d0987f5b178687678ce526dabd2c91d5 363 SUPERFAMILY SSF51726 11 362 2.22E-122 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AVL55_18550 d0987f5b178687678ce526dabd2c91d5 363 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 151 167 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AVL55_18550 d0987f5b178687678ce526dabd2c91d5 363 Gene3D G3DSA:3.20.20.210 11 363 1.4E-159 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AVL55_06765 c3ace0cf175d8ee3d04d8fee42d09944 92 Pfam PF13202 EF hand 59 77 0.0015 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AVL55_06765 c3ace0cf175d8ee3d04d8fee42d09944 92 Pfam PF13202 EF hand 33 49 0.0031 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AVL55_06765 c3ace0cf175d8ee3d04d8fee42d09944 92 Gene3D G3DSA:1.10.238.10 21 82 3.6E-9 T 11-10-2018 AVL55_06765 c3ace0cf175d8ee3d04d8fee42d09944 92 SUPERFAMILY SSF47473 29 80 2.19E-8 T 11-10-2018 IPR011992 EF-hand domain pair AVL55_07530 7891705f0c219c51f94bef3807aded99 196 Gene3D G3DSA:1.10.357.10 3 190 4.6E-35 T 11-10-2018 AVL55_07530 7891705f0c219c51f94bef3807aded99 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_07530 7891705f0c219c51f94bef3807aded99 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_07530 7891705f0c219c51f94bef3807aded99 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 5.6E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_07530 7891705f0c219c51f94bef3807aded99 196 SUPERFAMILY SSF48498 74 187 4.45E-15 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AVL55_07530 7891705f0c219c51f94bef3807aded99 196 SUPERFAMILY SSF46689 5 75 2.77E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 53 577 6.0E-123 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 3.5E-66 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 3.5E-66 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 166 3.5E-66 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 488 505 3.5E-66 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 166 185 3.5E-66 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 3.5E-66 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 268 284 3.5E-66 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 74 99 3.5E-66 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 298 317 3.5E-66 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 Gene3D G3DSA:3.60.20.40 405 585 1.8E-59 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 SUPERFAMILY SSF56235 46 584 1.31E-160 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_03670 9d6878f76debe9f7389915140344cc34 585 Gene3D G3DSA:1.10.246.130 284 404 2.0E-33 T 11-10-2018 AVL55_03670 9d6878f76debe9f7389915140344cc34 585 Pfam PF01019 Gamma-glutamyltranspeptidase 67 580 8.9E-148 T 11-10-2018 AVL55_10555 3b5dfb90e8b6c817bd86549bd645dd39 113 Gene3D G3DSA:3.40.630.30 1 83 1.0E-7 T 11-10-2018 AVL55_10555 3b5dfb90e8b6c817bd86549bd645dd39 113 SUPERFAMILY SSF55729 2 80 3.68E-5 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_19505 e2ae0da7d5b7dd6dea29fbe779022fdb 592 SUPERFAMILY SSF54001 43 240 4.91E-26 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AVL55_19505 e2ae0da7d5b7dd6dea29fbe779022fdb 592 Pfam PF00112 Papain family cysteine protease 43 220 1.1E-6 T 11-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 AVL55_19505 e2ae0da7d5b7dd6dea29fbe779022fdb 592 SUPERFAMILY SSF53474 403 486 9.15E-5 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_19505 e2ae0da7d5b7dd6dea29fbe779022fdb 592 Gene3D G3DSA:3.90.70.10 4 240 5.5E-52 T 11-10-2018 AVL55_19295 10967b611265b44153fcafb77de12b8b 240 SUPERFAMILY SSF52172 5 128 3.42E-42 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_19295 10967b611265b44153fcafb77de12b8b 240 Pfam PF00072 Response regulator receiver domain 8 117 2.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_19295 10967b611265b44153fcafb77de12b8b 240 SMART SM00862 157 233 2.4E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_19295 10967b611265b44153fcafb77de12b8b 240 Gene3D G3DSA:1.10.10.10 131 240 3.1E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_19295 10967b611265b44153fcafb77de12b8b 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 2.0E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_19295 10967b611265b44153fcafb77de12b8b 240 SUPERFAMILY SSF46894 139 235 1.02E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_19295 10967b611265b44153fcafb77de12b8b 240 Gene3D G3DSA:3.40.50.2300 1 127 4.9E-40 T 11-10-2018 AVL55_19295 10967b611265b44153fcafb77de12b8b 240 SMART SM00448 6 117 2.5E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_11020 3508d0d14da847e9926a797662750051 223 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 35.083 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AVL55_11020 3508d0d14da847e9926a797662750051 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 217 1.1E-81 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AVL55_11020 3508d0d14da847e9926a797662750051 223 Gene3D G3DSA:3.40.50.300 2 223 1.9E-84 T 11-10-2018 AVL55_11020 3508d0d14da847e9926a797662750051 223 Pfam PF02224 Cytidylate kinase 7 219 7.8E-77 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AVL55_11020 3508d0d14da847e9926a797662750051 223 SUPERFAMILY SSF52540 5 222 4.99E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11665 b6e5862d3168c7e0441da2415389425b 225 SUPERFAMILY SSF52833 17 223 1.11E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_11665 b6e5862d3168c7e0441da2415389425b 225 Pfam PF01323 DSBA-like thioredoxin domain 18 218 4.7E-42 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AVL55_11665 b6e5862d3168c7e0441da2415389425b 225 Gene3D G3DSA:3.40.30.10 8 221 1.3E-69 T 11-10-2018 AVL55_07700 aba6b312179ba234993d124a28d59003 149 SMART SM01116 77 149 3.6E-49 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 SUPERFAMILY SSF55234 82 149 8.89E-30 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 Gene3D G3DSA:1.10.260.40 2 82 1.9E-29 T 11-10-2018 AVL55_07700 aba6b312179ba234993d124a28d59003 149 Gene3D G3DSA:3.30.1160.10 83 149 6.9E-34 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 Pfam PF02560 Cyanate lyase C-terminal domain 81 147 6.3E-35 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 Hamap MF_00535 Cyanate hydratase [cynS]. 1 149 80.815 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 PRINTS PR01693 Cyanase signature 134 144 2.5E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 PRINTS PR01693 Cyanase signature 36 53 2.5E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 PRINTS PR01693 Cyanase signature 16 31 2.5E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 PRINTS PR01693 Cyanase signature 103 119 2.5E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 PRINTS PR01693 Cyanase signature 85 99 2.5E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 PIRSF PIRSF001263 1 149 8.9E-49 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 TIGRFAM TIGR00673 cynS: cyanase 6 149 1.3E-51 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AVL55_07700 aba6b312179ba234993d124a28d59003 149 SUPERFAMILY SSF47413 2 79 4.69E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 PIRSF PIRSF036389 2 757 2.3E-202 T 11-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 Gene3D G3DSA:3.30.365.10 354 445 6.5E-46 T 11-10-2018 AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 Gene3D G3DSA:3.30.365.10 47 181 1.1E-21 T 11-10-2018 AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 SUPERFAMILY SSF56003 292 759 4.77E-104 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 Gene3D G3DSA:3.30.365.10 612 760 7.4E-39 T 11-10-2018 AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 SMART SM01008 214 300 8.9E-13 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 SUPERFAMILY SSF56003 48 240 2.24E-32 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 324 571 1.4E-26 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 51 174 2.0E-13 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 614 704 5.5E-16 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AVL55_07900 a84841f4a5bdff8f109547deba1b7c44 760 Gene3D G3DSA:3.30.365.10 330 565 6.5E-46 T 11-10-2018 AVL55_12340 1557a4895d49b15f73e17344762a3325 429 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 35 81 1.5E-11 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger AVL55_12340 1557a4895d49b15f73e17344762a3325 429 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 88 136 4.7E-9 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain AVL55_12340 1557a4895d49b15f73e17344762a3325 429 Pfam PF01610 Transposase 152 386 2.8E-62 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.5E-46 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 Gene3D G3DSA:3.40.47.10 126 387 1.3E-141 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 389 2.4E-129 T 11-10-2018 IPR002155 Thiolase GO:0016747 AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 Gene3D G3DSA:3.40.47.10 8 274 1.3E-141 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 PIRSF PIRSF000429 1 391 3.5E-113 T 11-10-2018 IPR002155 Thiolase GO:0016747 AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 SUPERFAMILY SSF53901 6 268 5.01E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 Pfam PF00108 Thiolase, N-terminal domain 6 261 4.1E-86 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AVL55_08425 72ef2d125d800f8ef51cc7a13565b7e8 391 SUPERFAMILY SSF53901 270 390 2.28E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_03810 4ab1a76a698285830dda446690b21d78 321 Pfam PF01906 Putative heavy-metal-binding 3 107 6.2E-31 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AVL55_03810 4ab1a76a698285830dda446690b21d78 321 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 3 108 20.73 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AVL55_03810 4ab1a76a698285830dda446690b21d78 321 Gene3D G3DSA:3.30.110.70 4 111 4.6E-35 T 11-10-2018 AVL55_03810 4ab1a76a698285830dda446690b21d78 321 SUPERFAMILY SSF117782 4 109 3.01E-29 T 11-10-2018 IPR035439 UPF0145 domain superfamily AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 SUPERFAMILY SSF52540 58 336 4.39E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 Pfam PF16124 RecQ zinc-binding 529 576 1.7E-6 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 Pfam PF00270 DEAD/DEAH box helicase 20 181 8.6E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 Pfam PF00271 Helicase conserved C-terminal domain 216 322 1.4E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 SMART SM00487 13 209 2.6E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 Gene3D G3DSA:3.40.50.300 201 402 1.3E-44 T 11-10-2018 AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 Gene3D G3DSA:3.40.50.300 1 199 4.5E-66 T 11-10-2018 AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 Gene3D G3DSA:1.10.10.10 518 663 8.1E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 SMART SM00490 242 323 5.7E-26 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 132 141 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AVL55_14850 2e41134ad7f0f33df1a9c4d93d33a41d 663 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 345 4.0E-110 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AVL55_01030 8c4dbf419140094a6e4993ee80125ff2 885 SUPERFAMILY SSF56935 35 883 4.4E-87 T 11-10-2018 AVL55_01030 8c4dbf419140094a6e4993ee80125ff2 885 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 154 7.3E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_01030 8c4dbf419140094a6e4993ee80125ff2 885 Gene3D G3DSA:2.170.130.10 43 166 1.3E-17 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_01030 8c4dbf419140094a6e4993ee80125ff2 885 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 884 1.5E-184 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AVL55_01030 8c4dbf419140094a6e4993ee80125ff2 885 Pfam PF00593 TonB dependent receptor 407 883 6.8E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_01030 8c4dbf419140094a6e4993ee80125ff2 885 Gene3D G3DSA:2.40.170.20 193 884 3.6E-40 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_09695 653f5d6b23009ed49a4bee7ecb19a2ce 866 SUPERFAMILY SSF53474 460 787 7.36E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_09695 653f5d6b23009ed49a4bee7ecb19a2ce 866 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 274 4.6E-31 T 11-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain AVL55_09695 653f5d6b23009ed49a4bee7ecb19a2ce 866 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 851 1.1E-241 T 11-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family AVL55_09695 653f5d6b23009ed49a4bee7ecb19a2ce 866 Gene3D G3DSA:3.40.50.1820 475 654 6.4E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_14295 a0a79147d9c95a0552fded6396bf1e0a 372 SMART SM00996 4 369 4.0E-11 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AVL55_14295 a0a79147d9c95a0552fded6396bf1e0a 372 SMART SM00997 170 329 8.8E-66 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AVL55_14295 a0a79147d9c95a0552fded6396bf1e0a 372 SUPERFAMILY SSF51735 170 329 1.09E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_14295 a0a79147d9c95a0552fded6396bf1e0a 372 Gene3D G3DSA:3.40.50.720 172 329 7.2E-103 T 11-10-2018 AVL55_14295 a0a79147d9c95a0552fded6396bf1e0a 372 Gene3D G3DSA:3.40.50.1480 9 366 7.2E-103 T 11-10-2018 AVL55_14295 a0a79147d9c95a0552fded6396bf1e0a 372 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 27 130 2.6E-11 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AVL55_14295 a0a79147d9c95a0552fded6396bf1e0a 372 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 184 327 1.1E-36 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AVL55_14295 a0a79147d9c95a0552fded6396bf1e0a 372 SUPERFAMILY SSF52283 7 366 3.23E-25 T 11-10-2018 AVL55_13880 bc59d9f429ce39ab132884c8ab825c8d 348 Pfam PF02547 Queuosine biosynthesis protein 3 345 2.7E-135 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AVL55_13880 bc59d9f429ce39ab132884c8ab825c8d 348 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 2.2E-151 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AVL55_13880 bc59d9f429ce39ab132884c8ab825c8d 348 Gene3D G3DSA:2.40.10.240 64 161 7.7E-121 T 11-10-2018 AVL55_13880 bc59d9f429ce39ab132884c8ab825c8d 348 Gene3D G3DSA:3.40.1780.10 14 345 7.7E-121 T 11-10-2018 AVL55_13880 bc59d9f429ce39ab132884c8ab825c8d 348 SUPERFAMILY SSF111337 1 345 4.97E-137 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AVL55_13880 bc59d9f429ce39ab132884c8ab825c8d 348 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.379 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AVL55_04675 9bc7b5e439cad26911301edf4a36c93c 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 0.0015 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_04675 9bc7b5e439cad26911301edf4a36c93c 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 1.3E-144 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AVL55_04675 9bc7b5e439cad26911301edf4a36c93c 274 Gene3D G3DSA:1.10.166.10 1 70 2.1E-28 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 AVL55_04675 9bc7b5e439cad26911301edf4a36c93c 274 Gene3D G3DSA:2.160.10.10 87 257 5.5E-55 T 11-10-2018 AVL55_04675 9bc7b5e439cad26911301edf4a36c93c 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.486 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AVL55_04675 9bc7b5e439cad26911301edf4a36c93c 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 1.8E-24 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AVL55_04675 9bc7b5e439cad26911301edf4a36c93c 274 SUPERFAMILY SSF51161 2 256 1.15E-75 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_04675 9bc7b5e439cad26911301edf4a36c93c 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.5E-13 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_04675 9bc7b5e439cad26911301edf4a36c93c 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AVL55_19825 a056285b0368edfff8664af1916b0807 212 Pfam PF14487 Domain of unknown function (DUF4433) 9 212 4.1E-61 T 11-10-2018 IPR029494 Domain of unknown function DUF4433 AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 SUPERFAMILY SSF51230 532 605 8.64E-21 T 11-10-2018 IPR011053 Single hybrid motif AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 SUPERFAMILY SSF89000 297 460 1.53E-50 T 11-10-2018 AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 601 5.1E-259 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 Pfam PF00364 Biotin-requiring enzyme 540 604 2.4E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 Pfam PF00682 HMGL-like 6 270 6.6E-49 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 Pfam PF02436 Conserved carboxylase domain 292 500 1.1E-58 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 562 579 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 SUPERFAMILY SSF51569 1 300 1.41E-84 T 11-10-2018 AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 Gene3D G3DSA:3.20.20.70 1 463 3.6E-165 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_05360 c770cc205b9c7c18d7dca760f189bd8a 606 Gene3D G3DSA:2.40.50.100 535 606 5.5E-24 T 11-10-2018 AVL55_01650 032ac74532d46080a4ac2a3d02303a52 605 Gene3D G3DSA:1.20.1530.20 2 394 9.7E-16 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AVL55_01650 032ac74532d46080a4ac2a3d02303a52 605 Gene3D G3DSA:3.40.50.720 398 516 1.7E-10 T 11-10-2018 AVL55_01650 032ac74532d46080a4ac2a3d02303a52 605 SUPERFAMILY SSF51735 400 502 3.7E-9 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_01650 032ac74532d46080a4ac2a3d02303a52 605 Pfam PF02254 TrkA-N domain 400 500 1.4E-7 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AVL55_01650 032ac74532d46080a4ac2a3d02303a52 605 Pfam PF00999 Sodium/hydrogen exchanger family 9 385 1.6E-33 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AVL55_08435 421c4f036e2ab7c66ac51ca05e60ae11 410 Gene3D G3DSA:3.40.640.10 41 298 5.0E-140 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_08435 421c4f036e2ab7c66ac51ca05e60ae11 410 PIRSF PIRSF038800 2 401 2.0E-137 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AVL55_08435 421c4f036e2ab7c66ac51ca05e60ae11 410 Pfam PF00266 Aminotransferase class-V 155 317 1.7E-15 T 11-10-2018 IPR000192 Aminotransferase class V domain AVL55_08435 421c4f036e2ab7c66ac51ca05e60ae11 410 TIGRFAM TIGR01814 kynureninase: kynureninase 7 393 8.3E-83 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AVL55_08435 421c4f036e2ab7c66ac51ca05e60ae11 410 SUPERFAMILY SSF53383 10 397 9.53E-72 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_08435 421c4f036e2ab7c66ac51ca05e60ae11 410 Gene3D G3DSA:3.90.1150.10 10 393 5.0E-140 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_19975 1198a3d88f225cbc62a9b48163ccdf06 199 SUPERFAMILY SSF52833 2 78 1.38E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_19975 1198a3d88f225cbc62a9b48163ccdf06 199 Gene3D G3DSA:1.20.1050.10 82 195 4.3E-35 T 11-10-2018 AVL55_19975 1198a3d88f225cbc62a9b48163ccdf06 199 Gene3D G3DSA:3.40.30.10 1 78 8.6E-23 T 11-10-2018 AVL55_19975 1198a3d88f225cbc62a9b48163ccdf06 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 108 186 2.3E-9 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AVL55_19975 1198a3d88f225cbc62a9b48163ccdf06 199 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 3.3E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_19975 1198a3d88f225cbc62a9b48163ccdf06 199 SUPERFAMILY SSF47616 72 197 5.57E-26 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 Pfam PF01556 DnaJ C terminal domain 119 331 6.4E-47 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 2.6E-141 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 42.565 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 Gene3D G3DSA:2.10.230.10 137 207 2.4E-25 T 11-10-2018 AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 Pfam PF00684 DnaJ central domain 145 205 1.4E-15 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 SUPERFAMILY SSF57938 132 208 3.53E-23 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 Gene3D G3DSA:2.60.260.20 253 361 7.2E-29 T 11-10-2018 AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 SUPERFAMILY SSF46565 1 107 3.01E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 SUPERFAMILY SSF49493 257 342 2.49E-22 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 PRINTS PR00625 DnaJ domain signature 7 25 7.7E-32 T 11-10-2018 IPR001623 DnaJ domain AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 PRINTS PR00625 DnaJ domain signature 42 62 7.7E-32 T 11-10-2018 IPR001623 DnaJ domain AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 PRINTS PR00625 DnaJ domain signature 25 40 7.7E-32 T 11-10-2018 IPR001623 DnaJ domain AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 PRINTS PR00625 DnaJ domain signature 62 81 7.7E-32 T 11-10-2018 IPR001623 DnaJ domain AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 SUPERFAMILY SSF49493 112 265 1.07E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 Gene3D G3DSA:1.10.287.110 1 111 5.6E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 Pfam PF00226 DnaJ domain 5 67 1.2E-27 T 11-10-2018 IPR001623 DnaJ domain AVL55_07420 61c2e92d22574b3e947a4115dbc1d613 376 SMART SM00271 4 62 2.5E-29 T 11-10-2018 IPR001623 DnaJ domain AVL55_14995 8636ea3899505c1102121f326d8a81e1 310 Gene3D G3DSA:3.10.310.30 258 306 9.6E-6 T 11-10-2018 AVL55_14995 8636ea3899505c1102121f326d8a81e1 310 SUPERFAMILY SSF64182 4 307 8.63E-9 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AVL55_14995 8636ea3899505c1102121f326d8a81e1 310 PIRSF PIRSF028235 1 310 2.0E-160 T 11-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 AVL55_07600 3febb718aa61c96ef5184cbf704d35e1 193 SUPERFAMILY SSF53178 4 190 9.55E-64 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AVL55_07600 3febb718aa61c96ef5184cbf704d35e1 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 32.287 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AVL55_07600 3febb718aa61c96ef5184cbf704d35e1 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 4.6E-63 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AVL55_07600 3febb718aa61c96ef5184cbf704d35e1 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AVL55_07600 3febb718aa61c96ef5184cbf704d35e1 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 2.2E-50 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AVL55_07600 3febb718aa61c96ef5184cbf704d35e1 193 Gene3D G3DSA:3.40.50.1470 1 193 4.6E-68 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AVL55_07115 f4ec04b995d5ed0bba766a3dbd438fb3 606 Pfam PF00005 ABC transporter 370 519 2.2E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_07115 f4ec04b995d5ed0bba766a3dbd438fb3 606 SMART SM00382 379 559 3.2E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_07115 f4ec04b995d5ed0bba766a3dbd438fb3 606 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_07115 f4ec04b995d5ed0bba766a3dbd438fb3 606 SUPERFAMILY SSF52540 344 589 2.31E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07115 f4ec04b995d5ed0bba766a3dbd438fb3 606 SUPERFAMILY SSF90123 13 336 1.7E-59 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_07115 f4ec04b995d5ed0bba766a3dbd438fb3 606 Pfam PF00664 ABC transporter transmembrane region 33 308 2.3E-39 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AVL55_07115 f4ec04b995d5ed0bba766a3dbd438fb3 606 Gene3D G3DSA:3.40.50.300 344 605 2.5E-96 T 11-10-2018 AVL55_07115 f4ec04b995d5ed0bba766a3dbd438fb3 606 Gene3D G3DSA:1.20.1560.10 22 343 9.7E-108 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_02080 9e5fd7adc25a25422019e0762323225f 387 Gene3D G3DSA:2.70.70.10 249 387 2.9E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_02080 9e5fd7adc25a25422019e0762323225f 387 SUPERFAMILY SSF51261 223 386 1.1E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_02080 9e5fd7adc25a25422019e0762323225f 387 Pfam PF01551 Peptidase family M23 289 382 8.2E-24 T 11-10-2018 IPR016047 Peptidase M23 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 Gene3D G3DSA:1.10.220.30 101 206 1.4E-29 T 11-10-2018 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 SUPERFAMILY SSF48029 14 129 1.27E-22 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 Gene3D G3DSA:1.10.220.30 208 346 5.5E-43 T 11-10-2018 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 Pfam PF14841 FliG middle domain 129 200 1.1E-26 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 Pfam PF01706 FliG C-terminal domain 231 337 1.3E-40 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 14 344 9.8E-100 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 PIRSF PIRSF003161 12 346 4.7E-116 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 Gene3D G3DSA:1.10.220.30 12 97 1.6E-19 T 11-10-2018 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 127 150 7.6E-59 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 47 73 7.6E-59 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 261 281 7.6E-59 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 285 311 7.6E-59 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 208 233 7.6E-59 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 239 259 7.6E-59 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 18 34 7.6E-59 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 Pfam PF14842 FliG N-terminal domain 17 118 8.2E-30 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AVL55_05125 1c7cd0e8d6a853d4110dba17ea75013e 346 SUPERFAMILY SSF48029 127 338 2.22E-67 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AVL55_16705 df1b3b1ff8e274a156ad4322b8776ec6 369 Gene3D G3DSA:3.40.50.150 15 364 3.7E-133 T 11-10-2018 AVL55_16705 df1b3b1ff8e274a156ad4322b8776ec6 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 13 368 9.8E-167 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AVL55_16705 df1b3b1ff8e274a156ad4322b8776ec6 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 6 368 43.306 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AVL55_16705 df1b3b1ff8e274a156ad4322b8776ec6 369 Gene3D G3DSA:3.40.1350.30 47 191 3.7E-133 T 11-10-2018 AVL55_16705 df1b3b1ff8e274a156ad4322b8776ec6 369 SUPERFAMILY SSF53335 11 367 4.56E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_16705 df1b3b1ff8e274a156ad4322b8776ec6 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 12 368 4.9E-169 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AVL55_16705 df1b3b1ff8e274a156ad4322b8776ec6 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AVL55_16440 a9b165f2e74ac58a57b5a94dafa4a9b0 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.0E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_16440 a9b165f2e74ac58a57b5a94dafa4a9b0 294 Pfam PF03466 LysR substrate binding domain 88 284 9.6E-34 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_16440 a9b165f2e74ac58a57b5a94dafa4a9b0 294 SUPERFAMILY SSF46785 2 111 1.05E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_16440 a9b165f2e74ac58a57b5a94dafa4a9b0 294 Gene3D G3DSA:1.10.10.10 1 88 2.9E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16440 a9b165f2e74ac58a57b5a94dafa4a9b0 294 SUPERFAMILY SSF53850 89 288 1.07E-33 T 11-10-2018 AVL55_16440 a9b165f2e74ac58a57b5a94dafa4a9b0 294 Gene3D G3DSA:3.40.190.290 90 285 1.6E-32 T 11-10-2018 AVL55_02715 7672a0225366c061605b15756a6f8052 763 SMART SM00065 17 164 6.6E-25 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_02715 7672a0225366c061605b15756a6f8052 763 Gene3D G3DSA:1.10.274.10 197 324 1.9E-54 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AVL55_02715 7672a0225366c061605b15756a6f8052 763 SUPERFAMILY SSF51621 435 722 3.14E-94 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AVL55_02715 7672a0225366c061605b15756a6f8052 763 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 628 646 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AVL55_02715 7672a0225366c061605b15756a6f8052 763 SUPERFAMILY SSF55781 2 159 2.05E-32 T 11-10-2018 AVL55_02715 7672a0225366c061605b15756a6f8052 763 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 681 693 5.4E-23 T 11-10-2018 AVL55_02715 7672a0225366c061605b15756a6f8052 763 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 628 643 5.4E-23 T 11-10-2018 AVL55_02715 7672a0225366c061605b15756a6f8052 763 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 645 660 5.4E-23 T 11-10-2018 AVL55_02715 7672a0225366c061605b15756a6f8052 763 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 5.4E-23 T 11-10-2018 AVL55_02715 7672a0225366c061605b15756a6f8052 763 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 435 721 8.9E-93 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AVL55_02715 7672a0225366c061605b15756a6f8052 763 Pfam PF05524 PEP-utilising enzyme, N-terminal 179 301 2.4E-20 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AVL55_02715 7672a0225366c061605b15756a6f8052 763 Gene3D G3DSA:3.20.20.60 411 755 1.5E-101 T 11-10-2018 AVL55_02715 7672a0225366c061605b15756a6f8052 763 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 179 746 3.0E-133 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AVL55_02715 7672a0225366c061605b15756a6f8052 763 Pfam PF01590 GAF domain 18 154 7.8E-20 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_02715 7672a0225366c061605b15756a6f8052 763 SUPERFAMILY SSF52009 283 409 3.66E-28 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AVL55_02715 7672a0225366c061605b15756a6f8052 763 SUPERFAMILY SSF47831 208 316 1.7E-24 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AVL55_02715 7672a0225366c061605b15756a6f8052 763 Gene3D G3DSA:3.50.30.10 180 410 1.9E-54 T 11-10-2018 AVL55_02715 7672a0225366c061605b15756a6f8052 763 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 403 2.2E-20 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AVL55_02715 7672a0225366c061605b15756a6f8052 763 Gene3D G3DSA:3.30.450.40 1 164 7.2E-50 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_17930 9861a458bb26a7581ad0e0de09bb272b 237 SMART SM00382 27 213 2.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_17930 9861a458bb26a7581ad0e0de09bb272b 237 SUPERFAMILY SSF52540 1 224 2.1E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17930 9861a458bb26a7581ad0e0de09bb272b 237 Pfam PF00005 ABC transporter 18 165 6.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_17930 9861a458bb26a7581ad0e0de09bb272b 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_17930 9861a458bb26a7581ad0e0de09bb272b 237 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.8E-88 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AVL55_17930 9861a458bb26a7581ad0e0de09bb272b 237 Gene3D G3DSA:3.40.50.300 1 233 7.7E-65 T 11-10-2018 AVL55_14300 9587a6b24610d6547329c14ac70abfb0 401 Gene3D G3DSA:3.90.230.10 170 400 1.6E-70 T 11-10-2018 AVL55_14300 9587a6b24610d6547329c14ac70abfb0 401 Gene3D G3DSA:3.40.350.10 2 169 4.8E-42 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AVL55_14300 9587a6b24610d6547329c14ac70abfb0 401 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 170 2.1E-15 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AVL55_14300 9587a6b24610d6547329c14ac70abfb0 401 Pfam PF00557 Metallopeptidase family M24 179 385 7.6E-54 T 11-10-2018 IPR000994 Peptidase M24 AVL55_14300 9587a6b24610d6547329c14ac70abfb0 401 SUPERFAMILY SSF55920 150 393 1.7E-66 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AVL55_14300 9587a6b24610d6547329c14ac70abfb0 401 SUPERFAMILY SSF53092 17 169 3.49E-22 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AVL55_14300 9587a6b24610d6547329c14ac70abfb0 401 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 331 343 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AVL55_13060 e35c9c8a7674f9f9188c18cbb7004ffa 217 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 18 199 1.1E-45 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AVL55_13060 e35c9c8a7674f9f9188c18cbb7004ffa 217 Pfam PF00717 Peptidase S24-like 38 118 1.3E-15 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AVL55_13060 e35c9c8a7674f9f9188c18cbb7004ffa 217 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 159 178 3.1E-16 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AVL55_13060 e35c9c8a7674f9f9188c18cbb7004ffa 217 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 32 48 3.1E-16 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AVL55_13060 e35c9c8a7674f9f9188c18cbb7004ffa 217 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 95 107 3.1E-16 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AVL55_13060 e35c9c8a7674f9f9188c18cbb7004ffa 217 Gene3D G3DSA:2.10.109.10 30 198 6.4E-42 T 11-10-2018 AVL55_13060 e35c9c8a7674f9f9188c18cbb7004ffa 217 Gene3D G3DSA:2.170.230.10 106 158 6.4E-42 T 11-10-2018 AVL55_13060 e35c9c8a7674f9f9188c18cbb7004ffa 217 SUPERFAMILY SSF51306 30 212 2.75E-51 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AVL55_16950 caa713ff2b12271ed6844eb1b5b9c582 475 Pfam PF13520 Amino acid permease 14 375 1.6E-31 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AVL55_16950 caa713ff2b12271ed6844eb1b5b9c582 475 Gene3D G3DSA:1.20.1740.10 9 394 1.2E-59 T 11-10-2018 AVL55_16950 caa713ff2b12271ed6844eb1b5b9c582 475 PIRSF PIRSF006060 1 383 1.1E-55 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AVL55_16950 caa713ff2b12271ed6844eb1b5b9c582 475 PIRSF PIRSF006060 408 473 170.0 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AVL55_17450 1dffe74c7de1471c56a01df986b08f48 338 Pfam PF00535 Glycosyl transferase family 2 11 135 1.0E-5 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_17450 1dffe74c7de1471c56a01df986b08f48 338 Gene3D G3DSA:3.90.550.10 4 210 1.2E-5 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17450 1dffe74c7de1471c56a01df986b08f48 338 SUPERFAMILY SSF53448 3 151 8.02E-12 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_04105 212dcb6cf2c79ff07875d5191eaed040 132 Pfam PF03928 Haem-degrading 5 129 2.9E-26 T 11-10-2018 IPR005624 Haem-degrading AVL55_04105 212dcb6cf2c79ff07875d5191eaed040 132 SUPERFAMILY SSF143744 3 130 2.09E-29 T 11-10-2018 IPR038084 GlcG-like domain superfamily AVL55_04105 212dcb6cf2c79ff07875d5191eaed040 132 Gene3D G3DSA:3.30.450.150 1 132 1.4E-35 T 11-10-2018 IPR038084 GlcG-like domain superfamily AVL55_18400 7e1328c7466d75587096c43c17036d23 297 SUPERFAMILY SSF53850 49 257 2.5E-16 T 11-10-2018 AVL55_18400 7e1328c7466d75587096c43c17036d23 297 Gene3D G3DSA:3.40.190.10 216 253 1.5E-6 T 11-10-2018 AVL55_18400 7e1328c7466d75587096c43c17036d23 297 Gene3D G3DSA:3.40.190.10 132 215 1.5E-6 T 11-10-2018 AVL55_18400 7e1328c7466d75587096c43c17036d23 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 126 254 5.8E-6 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_03740 3c42e4e26926889cb296b5d436d0ed5f 233 Gene3D G3DSA:3.30.2010.10 135 225 1.0E-19 T 11-10-2018 AVL55_03740 3c42e4e26926889cb296b5d436d0ed5f 233 Pfam PF01863 Protein of unknown function DUF45 23 225 5.3E-62 T 11-10-2018 IPR002725 Protein of unknown function DUF45 AVL55_04405 8be777830cc4cfe58ee34de98e2b6e3c 201 Pfam PF00694 Aconitase C-terminal domain 5 127 2.1E-34 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AVL55_04405 8be777830cc4cfe58ee34de98e2b6e3c 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 3 201 41.56 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AVL55_04405 8be777830cc4cfe58ee34de98e2b6e3c 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 5 188 2.4E-79 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AVL55_04405 8be777830cc4cfe58ee34de98e2b6e3c 201 Gene3D G3DSA:3.20.19.10 1 182 2.1E-74 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AVL55_04405 8be777830cc4cfe58ee34de98e2b6e3c 201 SUPERFAMILY SSF52016 4 194 2.16E-56 T 11-10-2018 AVL55_08790 4b0739c69a8a1150043b74ff743038a1 89 SUPERFAMILY SSF100950 17 87 3.68E-15 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_08790 4b0739c69a8a1150043b74ff743038a1 89 Pfam PF04198 Putative sugar-binding domain 17 87 3.5E-18 T 11-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AVL55_08790 4b0739c69a8a1150043b74ff743038a1 89 Gene3D G3DSA:3.40.50.1360 10 89 4.4E-18 T 11-10-2018 AVL55_18260 0400951493956dca44624597130b78ca 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_18260 0400951493956dca44624597130b78ca 142 Gene3D G3DSA:1.10.10.2720 73 142 8.6E-30 T 11-10-2018 AVL55_18260 0400951493956dca44624597130b78ca 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.0E-26 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AVL55_18260 0400951493956dca44624597130b78ca 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.4E-30 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal AVL55_18260 0400951493956dca44624597130b78ca 142 SUPERFAMILY SSF54747 3 73 4.97E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AVL55_18260 0400951493956dca44624597130b78ca 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 1.4E-66 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18260 0400951493956dca44624597130b78ca 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 8.0E-15 T 11-10-2018 AVL55_18260 0400951493956dca44624597130b78ca 142 SMART SM00649 9 141 1.5E-87 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AVL55_18260 0400951493956dca44624597130b78ca 142 Gene3D G3DSA:3.30.1550.10 2 72 2.9E-35 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AVL55_18260 0400951493956dca44624597130b78ca 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.983 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AVL55_18260 0400951493956dca44624597130b78ca 142 SUPERFAMILY SSF46906 68 141 3.14E-27 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AVL55_11795 074c0303b5f19f538da200613d5f732d 946 Gene3D G3DSA:2.170.130.10 31 168 5.7E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_11795 074c0303b5f19f538da200613d5f732d 946 Pfam PF00593 TonB dependent receptor 408 945 5.3E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_11795 074c0303b5f19f538da200613d5f732d 946 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 164 5.1E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_11795 074c0303b5f19f538da200613d5f732d 946 SUPERFAMILY SSF56935 38 945 1.59E-90 T 11-10-2018 AVL55_08110 407c6ef32787b5b379e9e2b7a45136fc 469 SUPERFAMILY SSF51182 181 465 9.89E-91 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_08110 407c6ef32787b5b379e9e2b7a45136fc 469 Gene3D G3DSA:3.90.550.10 1 342 1.3E-119 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_08110 407c6ef32787b5b379e9e2b7a45136fc 469 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 465 8.3E-228 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AVL55_08110 407c6ef32787b5b379e9e2b7a45136fc 469 SUPERFAMILY SSF53448 1 276 8.56E-72 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_08110 407c6ef32787b5b379e9e2b7a45136fc 469 Pfam PF00483 Nucleotidyl transferase 2 282 1.3E-72 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AVL55_08110 407c6ef32787b5b379e9e2b7a45136fc 469 Pfam PF01050 Mannose-6-phosphate isomerase 311 461 3.0E-74 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AVL55_08110 407c6ef32787b5b379e9e2b7a45136fc 469 Gene3D G3DSA:2.60.120.10 343 453 1.0E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_14600 89c1d1a5796530dec772767edd6b4186 413 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 308 373 3.3E-15 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AVL55_14600 89c1d1a5796530dec772767edd6b4186 413 Gene3D G3DSA:3.30.1150.10 285 385 7.9E-23 T 11-10-2018 AVL55_14600 89c1d1a5796530dec772767edd6b4186 413 PRINTS PR01374 Gram-negative bacterial tonB protein signature 323 341 8.4E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_14600 89c1d1a5796530dec772767edd6b4186 413 PRINTS PR01374 Gram-negative bacterial tonB protein signature 342 359 8.4E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_14600 89c1d1a5796530dec772767edd6b4186 413 PRINTS PR01374 Gram-negative bacterial tonB protein signature 302 323 8.4E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_14600 89c1d1a5796530dec772767edd6b4186 413 SUPERFAMILY SSF74653 300 377 2.22E-22 T 11-10-2018 AVL55_14600 89c1d1a5796530dec772767edd6b4186 413 Pfam PF05569 BlaR1 peptidase M56 114 253 4.2E-32 T 11-10-2018 IPR008756 Peptidase M56 AVL55_14600 89c1d1a5796530dec772767edd6b4186 413 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 307 383 3.7E-18 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AVL55_15515 33cff0658cb87254184e01bee85a4ed9 223 SMART SM00986 50 211 1.3E-42 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_15515 33cff0658cb87254184e01bee85a4ed9 223 SMART SM00987 50 211 1.3E-42 T 11-10-2018 AVL55_15515 33cff0658cb87254184e01bee85a4ed9 223 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_15515 33cff0658cb87254184e01bee85a4ed9 223 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 5 222 40.61 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_15515 33cff0658cb87254184e01bee85a4ed9 223 SUPERFAMILY SSF52141 6 222 5.23E-96 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_15515 33cff0658cb87254184e01bee85a4ed9 223 Pfam PF03167 Uracil DNA glycosylase superfamily 54 210 4.1E-26 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_15515 33cff0658cb87254184e01bee85a4ed9 223 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 215 4.9E-88 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_15515 33cff0658cb87254184e01bee85a4ed9 223 Gene3D G3DSA:3.40.470.10 3 223 4.8E-105 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AVL55_14725 b5cc2f2cb75a0a0cec55030c06e37b86 182 SUPERFAMILY SSF52980 2 176 7.51E-70 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AVL55_14725 b5cc2f2cb75a0a0cec55030c06e37b86 182 Gene3D G3DSA:3.10.640.10 1 180 8.6E-75 T 11-10-2018 IPR038590 YaeQ superfamily AVL55_14725 b5cc2f2cb75a0a0cec55030c06e37b86 182 SMART SM01322 1 176 5.4E-111 T 11-10-2018 IPR009822 YaeQ AVL55_14725 b5cc2f2cb75a0a0cec55030c06e37b86 182 Pfam PF07152 YaeQ protein 1 170 4.0E-74 T 11-10-2018 IPR009822 YaeQ AVL55_14725 b5cc2f2cb75a0a0cec55030c06e37b86 182 PIRSF PIRSF011484 1 181 2.8E-70 T 11-10-2018 IPR009822 YaeQ AVL55_06415 90fdee510a8a1f8c55241a246d8d7b53 294 SMART SM00900 169 255 9.9E-25 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AVL55_06415 90fdee510a8a1f8c55241a246d8d7b53 294 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 3 257 24.231 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AVL55_06415 90fdee510a8a1f8c55241a246d8d7b53 294 Pfam PF04205 FMN-binding domain 179 252 2.9E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AVL55_06415 90fdee510a8a1f8c55241a246d8d7b53 294 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 179 256 9.8E-33 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AVL55_01495 d252f142d5e7cbdbb1ae98461c0eee5c 405 SUPERFAMILY SSF103473 3 400 1.03E-38 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_01495 d252f142d5e7cbdbb1ae98461c0eee5c 405 Gene3D G3DSA:1.20.1250.20 203 405 2.1E-32 T 11-10-2018 AVL55_01495 d252f142d5e7cbdbb1ae98461c0eee5c 405 Pfam PF03825 Nucleoside H+ symporter 2 399 1.1E-123 T 11-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 AVL55_01495 d252f142d5e7cbdbb1ae98461c0eee5c 405 Gene3D G3DSA:1.20.1250.20 3 195 1.6E-16 T 11-10-2018 AVL55_12880 3129ff1cd365562c8d1f2da51d5759bb 222 Gene3D G3DSA:3.90.850.10 1 222 2.9E-64 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AVL55_12880 3129ff1cd365562c8d1f2da51d5759bb 222 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 19 216 2.5E-45 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AVL55_12880 3129ff1cd365562c8d1f2da51d5759bb 222 SUPERFAMILY SSF56529 15 220 4.32E-59 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 SUPERFAMILY SSF46894 135 209 2.14E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 Pfam PF00072 Response regulator receiver domain 5 115 1.4E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 SUPERFAMILY SSF52172 1 129 5.12E-23 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 SMART SM00421 147 204 1.1E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 SMART SM00448 2 115 1.1E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.2E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.2E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.2E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.8E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17210 bc7cd48a714eec842527fdc6bc3f30e3 214 Gene3D G3DSA:3.40.50.12740 2 209 6.0E-46 T 11-10-2018 AVL55_17400 05f87b634292fb497d915e7a1c6f76ff 632 SUPERFAMILY SSF69318 114 396 2.51E-7 T 11-10-2018 AVL55_17400 05f87b634292fb497d915e7a1c6f76ff 632 SUPERFAMILY SSF69318 315 615 1.22E-11 T 11-10-2018 AVL55_12870 7f6b64178023824fc91248581d4cbfd3 184 Gene3D G3DSA:3.40.630.30 18 182 1.8E-32 T 11-10-2018 AVL55_12870 7f6b64178023824fc91248581d4cbfd3 184 Pfam PF13302 Acetyltransferase (GNAT) domain 29 160 1.8E-19 T 11-10-2018 IPR000182 GNAT domain AVL55_12870 7f6b64178023824fc91248581d4cbfd3 184 SUPERFAMILY SSF55729 16 172 3.92E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_13255 77d4ce7ca96891f8bafada8d14fa5bf0 254 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 252 3.6E-89 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AVL55_13255 77d4ce7ca96891f8bafada8d14fa5bf0 254 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 247 38.12 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AVL55_13255 77d4ce7ca96891f8bafada8d14fa5bf0 254 Pfam PF13525 Outer membrane lipoprotein 35 239 2.1E-76 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like AVL55_13255 77d4ce7ca96891f8bafada8d14fa5bf0 254 SUPERFAMILY SSF48452 37 122 2.13E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13255 77d4ce7ca96891f8bafada8d14fa5bf0 254 Gene3D G3DSA:1.25.40.10 36 253 8.8E-61 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_15155 beaac17409c97ca6b593cac132673a59 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_15155 beaac17409c97ca6b593cac132673a59 145 Pfam PF00114 Pilin (bacterial filament) 41 136 1.1E-4 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AVL55_15155 beaac17409c97ca6b593cac132673a59 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 6.3E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_15155 beaac17409c97ca6b593cac132673a59 145 Gene3D G3DSA:3.30.700.10 12 143 2.3E-28 T 11-10-2018 AVL55_15155 beaac17409c97ca6b593cac132673a59 145 SUPERFAMILY SSF54523 12 136 5.76E-25 T 11-10-2018 AVL55_15155 beaac17409c97ca6b593cac132673a59 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 32 1.5E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 Gene3D G3DSA:3.30.360.10 291 456 7.3E-115 T 11-10-2018 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 1.0E-17 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 1.0E-17 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 1.0E-17 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 1.0E-17 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 4.3E-22 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 Gene3D G3DSA:3.40.50.720 133 467 7.3E-115 T 11-10-2018 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 SUPERFAMILY SSF51735 132 308 3.05E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 SMART SM00846 131 292 6.4E-54 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 1.0E-46 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12075 a5377c3fe85f006829f4bd2166cc05f8 481 SUPERFAMILY SSF55347 292 455 3.57E-52 T 11-10-2018 AVL55_05075 3455624af6015f127f12281b8053e1e3 315 SUPERFAMILY SSF51735 3 172 3.55E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_05075 3455624af6015f127f12281b8053e1e3 315 Gene3D G3DSA:3.30.360.10 132 315 8.5E-68 T 11-10-2018 AVL55_05075 3455624af6015f127f12281b8053e1e3 315 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 153 232 2.1E-10 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AVL55_05075 3455624af6015f127f12281b8053e1e3 315 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 126 1.6E-20 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AVL55_05075 3455624af6015f127f12281b8053e1e3 315 Gene3D G3DSA:3.40.50.720 1 131 6.2E-27 T 11-10-2018 AVL55_08405 b1d49d027c35a8496ff86bf5f3e0c858 266 SUPERFAMILY SSF52096 2 259 4.62E-69 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_08405 b1d49d027c35a8496ff86bf5f3e0c858 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 260 1.4E-50 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AVL55_08405 b1d49d027c35a8496ff86bf5f3e0c858 266 Gene3D G3DSA:1.10.12.10 204 266 7.3E-23 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AVL55_08405 b1d49d027c35a8496ff86bf5f3e0c858 266 Gene3D G3DSA:3.90.226.10 2 203 3.4E-61 T 11-10-2018 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 Gene3D G3DSA:3.50.50.60 480 636 1.1E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 SUPERFAMILY SSF51905 478 638 3.44E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 383 651 3.3E-23 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 Gene3D G3DSA:3.40.50.720 383 674 1.1E-108 T 11-10-2018 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 SUPERFAMILY SSF51395 10 370 1.52E-114 T 11-10-2018 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 504 528 3.3E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 384 406 3.3E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 486 7.3E-18 T 11-10-2018 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 629 645 7.3E-18 T 11-10-2018 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 404 7.3E-18 T 11-10-2018 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 508 526 7.3E-18 T 11-10-2018 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 SUPERFAMILY SSF51971 341 527 1.07E-39 T 11-10-2018 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 Gene3D G3DSA:3.20.20.70 10 377 3.8E-129 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_12790 f5a1c62745dd1521017c2d75068551e2 680 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 14 339 3.8E-88 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AVL55_02140 0f646c305f0c1c8a68ad26308cf2292a 153 SUPERFAMILY SSF54637 8 149 7.82E-22 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_02140 0f646c305f0c1c8a68ad26308cf2292a 153 Pfam PF14539 Domain of unknown function (DUF4442) 19 149 5.9E-50 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AVL55_02140 0f646c305f0c1c8a68ad26308cf2292a 153 Gene3D G3DSA:3.10.129.10 10 152 1.2E-37 T 11-10-2018 AVL55_13735 98fe9c55260aba40c8598a7325425614 450 Pfam PF13742 OB-fold nucleic acid binding domain 13 106 3.3E-27 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AVL55_13735 98fe9c55260aba40c8598a7325425614 450 Pfam PF02601 Exonuclease VII, large subunit 129 442 3.2E-96 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AVL55_13735 98fe9c55260aba40c8598a7325425614 450 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 14 362 2.9E-130 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AVL55_13735 98fe9c55260aba40c8598a7325425614 450 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 10 445 28.524 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AVL55_06930 2c396b8fec7695e35312376fd7252dc2 165 Gene3D G3DSA:3.30.2010.10 79 156 4.6E-8 T 11-10-2018 AVL55_06930 2c396b8fec7695e35312376fd7252dc2 165 Pfam PF01863 Protein of unknown function DUF45 93 151 2.4E-11 T 11-10-2018 IPR002725 Protein of unknown function DUF45 AVL55_19430 78ffbc11c06f4b3f365a9b7e093df3e5 663 Pfam PF13506 Glycosyl transferase family 21 196 375 3.9E-11 T 11-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 AVL55_19430 78ffbc11c06f4b3f365a9b7e093df3e5 663 Gene3D G3DSA:3.90.550.10 121 357 1.0E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_19430 78ffbc11c06f4b3f365a9b7e093df3e5 663 SUPERFAMILY SSF53448 129 407 1.69E-19 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_12520 c791bf67ece3a2658a0d6d517d3d1c20 310 SUPERFAMILY SSF46785 3 111 2.39E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_12520 c791bf67ece3a2658a0d6d517d3d1c20 310 Gene3D G3DSA:3.40.190.290 90 291 1.9E-51 T 11-10-2018 AVL55_12520 c791bf67ece3a2658a0d6d517d3d1c20 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.9E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_12520 c791bf67ece3a2658a0d6d517d3d1c20 310 Gene3D G3DSA:1.10.10.10 1 87 9.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_12520 c791bf67ece3a2658a0d6d517d3d1c20 310 Pfam PF03466 LysR substrate binding domain 90 293 1.5E-37 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_12520 c791bf67ece3a2658a0d6d517d3d1c20 310 SUPERFAMILY SSF53850 89 296 7.24E-39 T 11-10-2018 AVL55_14140 6d3aef6563b2d5b4e360ff1d5ef392d2 210 TIGRFAM TIGR03027 pepcterm_export: putative polysaccharide export protein, PEP-CTERM sytem-associated 46 210 2.1E-70 T 11-10-2018 IPR017477 PEP-CTERM, putative polysaccharide export protein AVL55_14140 6d3aef6563b2d5b4e360ff1d5ef392d2 210 Gene3D G3DSA:3.30.1950.10 66 119 3.7E-21 T 11-10-2018 AVL55_14140 6d3aef6563b2d5b4e360ff1d5ef392d2 210 Pfam PF02563 Polysaccharide biosynthesis/export protein 42 115 5.8E-21 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AVL55_14140 6d3aef6563b2d5b4e360ff1d5ef392d2 210 Gene3D G3DSA:3.10.560.10 128 207 3.7E-21 T 11-10-2018 AVL55_14140 6d3aef6563b2d5b4e360ff1d5ef392d2 210 Pfam PF10531 SLBB domain 125 173 8.4E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AVL55_07075 c2518cba886e413408a0b593d1348169 311 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_07075 c2518cba886e413408a0b593d1348169 311 SMART SM00382 81 267 1.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_07075 c2518cba886e413408a0b593d1348169 311 Pfam PF00005 ABC transporter 78 218 8.2E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_07075 c2518cba886e413408a0b593d1348169 311 Gene3D G3DSA:3.40.50.300 62 305 2.3E-53 T 11-10-2018 AVL55_07075 c2518cba886e413408a0b593d1348169 311 SUPERFAMILY SSF52540 77 283 5.1E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06735 421e6fc71bf534c74ca3766a65212167 266 SUPERFAMILY SSF52172 7 129 4.7E-18 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_06735 421e6fc71bf534c74ca3766a65212167 266 Pfam PF00072 Response regulator receiver domain 11 123 3.5E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_06735 421e6fc71bf534c74ca3766a65212167 266 Pfam PF00072 Response regulator receiver domain 147 260 8.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_06735 421e6fc71bf534c74ca3766a65212167 266 SUPERFAMILY SSF52172 143 265 1.85E-30 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_06735 421e6fc71bf534c74ca3766a65212167 266 Gene3D G3DSA:3.40.50.2300 1 127 1.7E-16 T 11-10-2018 AVL55_06735 421e6fc71bf534c74ca3766a65212167 266 Gene3D G3DSA:3.40.50.2300 141 265 5.1E-31 T 11-10-2018 AVL55_06735 421e6fc71bf534c74ca3766a65212167 266 SMART SM00448 145 260 2.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_06735 421e6fc71bf534c74ca3766a65212167 266 SMART SM00448 9 123 3.0E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_18560 0a18f1879dbdfc8276e1512a6370b71d 154 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 144 2.6E-49 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AVL55_18560 0a18f1879dbdfc8276e1512a6370b71d 154 PIRSF PIRSF016548 1 153 1.5E-47 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AVL55_18560 0a18f1879dbdfc8276e1512a6370b71d 154 Gene3D G3DSA:1.20.120.1370 1 151 5.1E-47 T 11-10-2018 IPR038309 Rsd/AlgQ superfamily AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 SUPERFAMILY SSF53623 82 294 4.45E-50 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 435 54.836 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 SUPERFAMILY SSF51984 1 78 5.62E-17 T 11-10-2018 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 Pfam PF01225 Mur ligase family, catalytic domain 1 83 1.4E-10 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 SUPERFAMILY SSF53244 297 434 2.09E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 Gene3D G3DSA:3.40.1190.10 81 296 7.1E-55 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 297 345 8.2E-11 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 Gene3D G3DSA:3.40.50.720 1 78 4.9E-26 T 11-10-2018 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 Pfam PF08245 Mur ligase middle domain 97 277 1.3E-21 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 1 435 4.2E-221 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AVL55_00875 01132c6551ce07e3e08ff0d286afdefc 440 Gene3D G3DSA:3.90.190.20 300 436 6.4E-30 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_09950 eed4fa928b5e6355f3533e1eab72e509 441 Pfam PF00270 DEAD/DEAH box helicase 25 190 3.1E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_09950 eed4fa928b5e6355f3533e1eab72e509 441 Gene3D G3DSA:3.40.50.300 2 219 6.9E-66 T 11-10-2018 AVL55_09950 eed4fa928b5e6355f3533e1eab72e509 441 SUPERFAMILY SSF52540 73 356 1.01E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09950 eed4fa928b5e6355f3533e1eab72e509 441 SMART SM00490 260 341 2.1E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_09950 eed4fa928b5e6355f3533e1eab72e509 441 Pfam PF00271 Helicase conserved C-terminal domain 235 341 1.8E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_09950 eed4fa928b5e6355f3533e1eab72e509 441 SMART SM00487 20 223 1.2E-51 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_09950 eed4fa928b5e6355f3533e1eab72e509 441 Gene3D G3DSA:3.40.50.300 220 419 3.6E-46 T 11-10-2018 AVL55_09950 eed4fa928b5e6355f3533e1eab72e509 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AVL55_13540 9dbe52256b42ecdbe327d301db0b17d1 285 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_13540 9dbe52256b42ecdbe327d301db0b17d1 285 Pfam PF16074 Type IV Pilus-assembly protein W 155 276 3.2E-18 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 AVL55_13540 9dbe52256b42ecdbe327d301db0b17d1 285 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 3.2E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_13540 9dbe52256b42ecdbe327d301db0b17d1 285 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 7.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_00500 bfffe53693e61a9d9089ff90962ab5e9 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 257 364 2.7E-22 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AVL55_00500 bfffe53693e61a9d9089ff90962ab5e9 377 Gene3D G3DSA:3.20.20.70 8 369 1.7E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_00500 bfffe53693e61a9d9089ff90962ab5e9 377 SMART SM00876 256 365 1.6E-27 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AVL55_00500 bfffe53693e61a9d9089ff90962ab5e9 377 Pfam PF04055 Radical SAM superfamily 81 227 5.5E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_00500 bfffe53693e61a9d9089ff90962ab5e9 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 4 371 1.5E-153 T 11-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AVL55_00500 bfffe53693e61a9d9089ff90962ab5e9 377 SUPERFAMILY SSF102114 35 336 1.57E-49 T 11-10-2018 AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 13 181 7.1E-19 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 Pfam PF00583 Acetyltransferase (GNAT) family 509 590 5.7E-8 T 11-10-2018 IPR000182 GNAT domain AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 Gene3D G3DSA:3.40.1080.10 5 179 2.7E-58 T 11-10-2018 AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 SUPERFAMILY SSF100950 182 434 4.44E-68 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 SUPERFAMILY SSF55729 402 594 6.85E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 Gene3D G3DSA:3.30.750.70 181 284 5.3E-41 T 11-10-2018 AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 SUPERFAMILY SSF100950 13 217 2.87E-36 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 Gene3D G3DSA:3.40.1080.20 285 433 5.2E-62 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 267 419 9.0E-65 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AVL55_00725 f2ffa05aa4852fb9dd8957fbc123e193 613 Gene3D G3DSA:3.40.630.30 449 612 1.2E-26 T 11-10-2018 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 Pfam PF00154 recA bacterial DNA recombination protein 7 268 4.9E-145 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 SMART SM00382 57 228 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 ProSitePatterns PS00321 recA signature. 213 221 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 Gene3D G3DSA:3.30.250.10 268 344 4.7E-28 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 SUPERFAMILY SSF54752 268 324 1.57E-21 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 2.2E-174 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 PRINTS PR00142 RecA protein signature 297 314 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 PRINTS PR00142 RecA protein signature 165 194 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 PRINTS PR00142 RecA protein signature 127 156 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 PRINTS PR00142 RecA protein signature 210 238 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 PRINTS PR00142 RecA protein signature 243 272 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 PRINTS PR00142 RecA protein signature 93 122 8.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 Gene3D G3DSA:3.40.50.300 26 267 2.0E-82 T 11-10-2018 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 Hamap MF_00268 Protein RecA [recA]. 5 329 51.636 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_04450 1ed697be17b4cd6127a1800c778548cc 348 SUPERFAMILY SSF52540 3 267 2.34E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00730 3b05a583c3b19c7fbab0dc8f1b1cb8e3 326 Pfam PF00850 Histone deacetylase domain 20 317 4.0E-78 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_00730 3b05a583c3b19c7fbab0dc8f1b1cb8e3 326 Gene3D G3DSA:3.40.800.20 1 320 4.1E-106 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_00730 3b05a583c3b19c7fbab0dc8f1b1cb8e3 326 PRINTS PR01270 Histone deacetylase superfamily signature 171 186 8.5E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_00730 3b05a583c3b19c7fbab0dc8f1b1cb8e3 326 PRINTS PR01270 Histone deacetylase superfamily signature 137 160 8.5E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_00730 3b05a583c3b19c7fbab0dc8f1b1cb8e3 326 PRINTS PR01270 Histone deacetylase superfamily signature 248 258 8.5E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AVL55_00730 3b05a583c3b19c7fbab0dc8f1b1cb8e3 326 SUPERFAMILY SSF52768 8 319 4.56E-91 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 SUPERFAMILY SSF56425 244 358 2.69E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 Gene3D G3DSA:3.50.50.60 20 410 3.0E-152 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 SUPERFAMILY SSF46977 432 533 1.31E-31 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 Gene3D G3DSA:1.20.58.100 431 545 1.4E-44 T 11-10-2018 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 PIRSF PIRSF000171 10 328 1.9E-24 T 11-10-2018 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 PIRSF PIRSF000171 336 545 7.9E-12 T 11-10-2018 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 21 40 2.7E-8 T 11-10-2018 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 361 383 2.7E-8 T 11-10-2018 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 SUPERFAMILY SSF51905 12 453 6.02E-70 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 Pfam PF00890 FAD binding domain 20 398 3.0E-99 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 20 42 7.4E-5 T 11-10-2018 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 383 7.4E-5 T 11-10-2018 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 18 526 5.4E-207 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 Gene3D G3DSA:3.90.700.10 254 364 3.0E-152 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_13455 a101e7d3f933ddf07951b1888e5b08cc 561 Pfam PF02910 Fumarate reductase flavoprotein C-term 447 531 4.2E-15 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 Gene3D G3DSA:3.40.50.620 7 377 3.3E-153 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 543 40.371 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 2.3E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 2.3E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 2.3E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 2.3E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 2.3E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 2.3E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 SUPERFAMILY SSF52374 4 385 2.65E-102 T 11-10-2018 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 SUPERFAMILY SSF47323 388 545 3.36E-45 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 SUPERFAMILY SSF50249 569 674 1.32E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 Gene3D G3DSA:2.40.50.140 564 675 1.8E-33 T 11-10-2018 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 557 675 3.9E-44 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 SUPERFAMILY SSF57770 141 175 8.63E-12 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 533 8.3E-182 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 Gene3D G3DSA:2.20.28.20 141 175 3.3E-153 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 Pfam PF01588 Putative tRNA binding domain 580 672 4.0E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 Pfam PF09334 tRNA synthetases class I (M) 7 394 6.7E-155 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_12430 218277a9b95e945e32c49c31bd959b74 675 Gene3D G3DSA:1.10.730.10 378 534 9.4E-35 T 11-10-2018 AVL55_16330 c6489329e7c8645cba9c1dd6c7dd9803 244 Gene3D G3DSA:3.20.20.70 1 243 4.2E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_16330 c6489329e7c8645cba9c1dd6c7dd9803 244 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 234 3.6E-40 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_16330 c6489329e7c8645cba9c1dd6c7dd9803 244 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 243 45.157 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_16330 c6489329e7c8645cba9c1dd6c7dd9803 244 SUPERFAMILY SSF51351 2 243 2.36E-67 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_16330 c6489329e7c8645cba9c1dd6c7dd9803 244 ProSitePatterns PS00171 Triosephosphate isomerase active site. 159 169 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_16330 c6489329e7c8645cba9c1dd6c7dd9803 244 Pfam PF00121 Triosephosphate isomerase 5 240 1.7E-68 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_18905 28c13d55bf47b71fad0f9a7c4a3280cc 540 SUPERFAMILY SSF53098 300 527 7.33E-10 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_18905 28c13d55bf47b71fad0f9a7c4a3280cc 540 Gene3D G3DSA:3.30.420.10 323 527 7.6E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_03975 03276c7cc9310cdf32b640e730ee8c0e 492 Pfam PF02321 Outer membrane efflux protein 306 487 1.4E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_03975 03276c7cc9310cdf32b640e730ee8c0e 492 Pfam PF02321 Outer membrane efflux protein 77 278 2.0E-17 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_03975 03276c7cc9310cdf32b640e730ee8c0e 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 489 6.8E-72 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AVL55_03975 03276c7cc9310cdf32b640e730ee8c0e 492 Gene3D G3DSA:1.20.1600.10 68 490 1.4E-99 T 11-10-2018 AVL55_03975 03276c7cc9310cdf32b640e730ee8c0e 492 Gene3D G3DSA:2.20.200.10 114 378 1.4E-99 T 11-10-2018 AVL55_03975 03276c7cc9310cdf32b640e730ee8c0e 492 SUPERFAMILY SSF56954 7 491 4.05E-81 T 11-10-2018 AVL55_08235 d9d0f7163cc79eb65fedc2e8c23ffaf8 469 Pfam PF03050 Transposase IS66 family 154 420 1.4E-48 T 11-10-2018 IPR004291 Transposase, IS66 AVL55_08235 d9d0f7163cc79eb65fedc2e8c23ffaf8 469 Pfam PF13005 zinc-finger binding domain of transposase IS66 96 139 3.1E-6 T 11-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 AVL55_06340 3c5f5ca773826b2c9e8bb60851bb110a 856 SUPERFAMILY SSF56935 43 848 1.31E-101 T 11-10-2018 AVL55_06340 3c5f5ca773826b2c9e8bb60851bb110a 856 Pfam PF00593 TonB dependent receptor 389 849 2.0E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_06340 3c5f5ca773826b2c9e8bb60851bb110a 856 Gene3D G3DSA:2.170.130.10 40 185 4.7E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_06340 3c5f5ca773826b2c9e8bb60851bb110a 856 Gene3D G3DSA:2.40.170.20 386 835 2.8E-52 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_06340 3c5f5ca773826b2c9e8bb60851bb110a 856 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 181 1.4E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 496 1.1E-132 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 200 216 3.2E-23 T 11-10-2018 AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 307 3.2E-23 T 11-10-2018 AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 226 240 3.2E-23 T 11-10-2018 AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 331 355 3.2E-23 T 11-10-2018 AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 Pfam PF12161 HsdM N-terminal domain 9 164 6.3E-23 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 SUPERFAMILY SSF53335 9 516 1.47E-127 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 Pfam PF02384 N-6 DNA Methylase 176 479 1.8E-105 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 Gene3D G3DSA:1.20.1260.30 1 194 1.3E-60 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AVL55_16200 e9bbb8312107be5c782fec0853e91660 522 Gene3D G3DSA:3.40.50.150 198 475 1.9E-85 T 11-10-2018 AVL55_06135 96229fa475f19f395b76c9e719f08ad6 83 SUPERFAMILY SSF47413 11 71 4.5E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_06135 96229fa475f19f395b76c9e719f08ad6 83 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 11 75 1.1E-26 T 11-10-2018 IPR031856 Putative bacterial antitoxin YdaS AVL55_06135 96229fa475f19f395b76c9e719f08ad6 83 Gene3D G3DSA:1.10.260.40 9 83 1.7E-25 T 11-10-2018 AVL55_07390 cc3263ca2ed8defd729a7f554ab6f7a0 792 Gene3D G3DSA:2.40.170.20 76 792 2.0E-139 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_07390 cc3263ca2ed8defd729a7f554ab6f7a0 792 SUPERFAMILY SSF56935 59 792 1.12E-110 T 11-10-2018 AVL55_07390 cc3263ca2ed8defd729a7f554ab6f7a0 792 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 193 6.7E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_07390 cc3263ca2ed8defd729a7f554ab6f7a0 792 Pfam PF00593 TonB dependent receptor 289 791 1.9E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_02895 2db6931b65322a2e9188c09a6e8bf191 804 Pfam PF13620 Carboxypeptidase regulatory-like domain 23 82 3.2E-10 T 11-10-2018 AVL55_02895 2db6931b65322a2e9188c09a6e8bf191 804 SUPERFAMILY SSF49464 23 101 1.02E-12 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AVL55_02895 2db6931b65322a2e9188c09a6e8bf191 804 Gene3D G3DSA:2.60.40.1120 23 100 4.8E-10 T 11-10-2018 AVL55_02895 2db6931b65322a2e9188c09a6e8bf191 804 Gene3D G3DSA:2.40.170.20 235 804 2.8E-61 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_02895 2db6931b65322a2e9188c09a6e8bf191 804 Gene3D G3DSA:2.170.130.10 108 231 1.1E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_02895 2db6931b65322a2e9188c09a6e8bf191 804 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 221 1.1E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_02895 2db6931b65322a2e9188c09a6e8bf191 804 Pfam PF00593 TonB dependent receptor 382 801 5.3E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_02895 2db6931b65322a2e9188c09a6e8bf191 804 SUPERFAMILY SSF56935 103 802 2.96E-96 T 11-10-2018 AVL55_07880 b63b0cbe8a48ef3e0bd190ab4ebdd3de 645 Gene3D G3DSA:1.20.1530.20 2 398 2.9E-76 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AVL55_07880 b63b0cbe8a48ef3e0bd190ab4ebdd3de 645 SUPERFAMILY SSF51735 418 561 1.41E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_07880 b63b0cbe8a48ef3e0bd190ab4ebdd3de 645 Gene3D G3DSA:3.40.50.720 418 577 9.9E-36 T 11-10-2018 AVL55_07880 b63b0cbe8a48ef3e0bd190ab4ebdd3de 645 Pfam PF02254 TrkA-N domain 421 535 1.5E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AVL55_07880 b63b0cbe8a48ef3e0bd190ab4ebdd3de 645 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 302 5.4E-74 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AVL55_07880 b63b0cbe8a48ef3e0bd190ab4ebdd3de 645 Pfam PF00999 Sodium/hydrogen exchanger family 10 389 3.2E-58 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AVL55_01075 2c88044e358bff0a520f5cccca20dbb8 158 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 5 150 3.0E-44 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AVL55_01075 2c88044e358bff0a520f5cccca20dbb8 158 Pfam PF04093 rod shape-determining protein MreD 5 150 3.9E-32 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AVL55_01075 2c88044e358bff0a520f5cccca20dbb8 158 PIRSF PIRSF018472 1 158 5.7E-55 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AVL55_12325 bf02505fd0ed2c56db531c56f99b2714 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 1.5E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12325 bf02505fd0ed2c56db531c56f99b2714 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 1.5E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12325 bf02505fd0ed2c56db531c56f99b2714 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.5E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12325 bf02505fd0ed2c56db531c56f99b2714 132 SUPERFAMILY SSF46955 5 126 1.61E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_12325 bf02505fd0ed2c56db531c56f99b2714 132 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 5 127 5.3E-52 T 11-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 AVL55_12325 bf02505fd0ed2c56db531c56f99b2714 132 Pfam PF13411 MerR HTH family regulatory protein 5 71 9.5E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12325 bf02505fd0ed2c56db531c56f99b2714 132 SMART SM00422 5 73 6.9E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_12325 bf02505fd0ed2c56db531c56f99b2714 132 Gene3D G3DSA:1.10.1660.10 2 126 6.2E-33 T 11-10-2018 AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 Gene3D G3DSA:3.40.10.10 13 88 5.4E-30 T 11-10-2018 IPR035451 Ada-like domain superfamily AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 Gene3D G3DSA:1.10.10.60 103 201 2.4E-17 T 11-10-2018 AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 Pfam PF06029 AlkA N-terminal domain 208 322 1.3E-31 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 SMART SM00342 112 196 1.3E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 SUPERFAMILY SSF55945 208 301 2.51E-25 T 11-10-2018 AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 Pfam PF12833 Helix-turn-helix domain 120 197 1.6E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 Pfam PF02805 Metal binding domain of Ada 25 86 9.0E-31 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 SMART SM01009 207 322 5.4E-34 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 Gene3D G3DSA:3.30.310.20 208 322 1.0E-25 T 11-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 Gene3D G3DSA:1.10.340.30 323 436 5.9E-20 T 11-10-2018 AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 SUPERFAMILY SSF57884 21 99 7.06E-33 T 11-10-2018 IPR035451 Ada-like domain superfamily AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 SUPERFAMILY SSF46689 150 198 4.93E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_18990 f7cec02e0f1dd796e50f0a7848389ea7 480 SUPERFAMILY SSF48150 313 476 2.94E-24 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AVL55_05135 0a6ea3fd6431f08b7015f7cbff223484 444 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 25 436 1.7E-194 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_05135 0a6ea3fd6431f08b7015f7cbff223484 444 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 10 437 1.9E-172 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_05135 0a6ea3fd6431f08b7015f7cbff223484 444 SMART SM00382 159 342 3.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_05135 0a6ea3fd6431f08b7015f7cbff223484 444 Gene3D G3DSA:3.40.50.12240 17 440 5.5E-153 T 11-10-2018 AVL55_05135 0a6ea3fd6431f08b7015f7cbff223484 444 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_05135 0a6ea3fd6431f08b7015f7cbff223484 444 SUPERFAMILY SSF52540 95 364 3.01E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05135 0a6ea3fd6431f08b7015f7cbff223484 444 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 358 1.7E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 Pfam PF00303 Thymidylate synthase 2 277 3.2E-121 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 277 2.7E-91 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 86 2.8E-41 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 SUPERFAMILY SSF55831 1 277 3.27E-126 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.5E-41 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.5E-41 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 PRINTS PR00108 Thymidylate synthase family signature 172 198 2.5E-41 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 PRINTS PR00108 Thymidylate synthase family signature 210 227 2.5E-41 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 Gene3D G3DSA:3.30.572.10 1 277 1.6E-127 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_02730 f510853cc9620011ffaf5b018180d9a0 277 Hamap MF_00008 Thymidylate synthase [thyA]. 1 277 41.118 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AVL55_13805 d48b2f68365d3822cf5d858c0f4ac511 118 SUPERFAMILY SSF89360 12 105 8.44E-19 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AVL55_13805 d48b2f68365d3822cf5d858c0f4ac511 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 117 3.0E-24 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AVL55_13805 d48b2f68365d3822cf5d858c0f4ac511 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 13 113 2.0E-15 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AVL55_13805 d48b2f68365d3822cf5d858c0f4ac511 118 Gene3D G3DSA:2.60.300.12 12 118 7.5E-26 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 251 2.1E-55 T 11-10-2018 AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 SUPERFAMILY SSF51735 13 251 9.92E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 3.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 Gene3D G3DSA:3.40.50.720 1 254 2.6E-70 T 11-10-2018 AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 8.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 8.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_04980 31f3a768728f8facd96e7cbc48178fe4 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 8.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_05540 21e12486750e30dae65959f124595cba 165 Pfam PF00583 Acetyltransferase (GNAT) family 30 123 4.8E-18 T 11-10-2018 IPR000182 GNAT domain AVL55_05540 21e12486750e30dae65959f124595cba 165 SUPERFAMILY SSF55729 13 134 1.86E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_05540 21e12486750e30dae65959f124595cba 165 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 18 139 2.2E-33 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AVL55_05540 21e12486750e30dae65959f124595cba 165 Gene3D G3DSA:3.40.630.30 12 160 4.7E-34 T 11-10-2018 AVL55_18915 4256f12bf110e8fb24325445e76f2085 1086 Pfam PF11867 Domain of unknown function (DUF3387) 738 1066 5.8E-23 T 11-10-2018 IPR021810 Protein of unknown function DUF3387 AVL55_18915 4256f12bf110e8fb24325445e76f2085 1086 Gene3D G3DSA:3.90.1570.50 78 261 7.2E-21 T 11-10-2018 AVL55_18915 4256f12bf110e8fb24325445e76f2085 1086 SUPERFAMILY SSF52540 230 465 1.19E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18915 4256f12bf110e8fb24325445e76f2085 1086 SMART SM00487 262 464 2.4E-5 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_18915 4256f12bf110e8fb24325445e76f2085 1086 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 45 726 2.7E-144 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AVL55_18915 4256f12bf110e8fb24325445e76f2085 1086 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 209 1.8E-28 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AVL55_18915 4256f12bf110e8fb24325445e76f2085 1086 Gene3D G3DSA:3.40.50.300 265 449 5.8E-49 T 11-10-2018 AVL55_18915 4256f12bf110e8fb24325445e76f2085 1086 Pfam PF04851 Type III restriction enzyme, res subunit 276 430 1.6E-15 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AVL55_18115 40da31f7e9a8b5fbe78708910e60c7e8 458 Pfam PF01618 MotA/TolQ/ExbB proton channel family 320 428 3.0E-26 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AVL55_14795 7dfe8e5a895773a5c9aefb4a848cadfa 358 SUPERFAMILY SSF52540 2 295 1.4E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14795 7dfe8e5a895773a5c9aefb4a848cadfa 358 PIRSF PIRSF034888 1 83 6.9E-10 T 11-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 AVL55_14795 7dfe8e5a895773a5c9aefb4a848cadfa 358 PIRSF PIRSF034888 70 227 0.071 T 11-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 AVL55_14795 7dfe8e5a895773a5c9aefb4a848cadfa 358 PIRSF PIRSF034888 243 358 4.8E-27 T 11-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 AVL55_14795 7dfe8e5a895773a5c9aefb4a848cadfa 358 Pfam PF13175 AAA ATPase domain 2 43 6.1E-11 T 11-10-2018 AVL55_14795 7dfe8e5a895773a5c9aefb4a848cadfa 358 Pfam PF13175 AAA ATPase domain 204 291 2.5E-12 T 11-10-2018 AVL55_14795 7dfe8e5a895773a5c9aefb4a848cadfa 358 Gene3D G3DSA:3.40.50.300 1 97 3.1E-9 T 11-10-2018 AVL55_14795 7dfe8e5a895773a5c9aefb4a848cadfa 358 Pfam PF12476 Protein of unknown function (DUF3696) 304 349 2.5E-11 T 11-10-2018 IPR022532 Domain of unknown function DUF3696, C-terminal AVL55_03075 1985cd124de2887f208a13f1a5d16780 181 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AVL55_03075 1985cd124de2887f208a13f1a5d16780 181 SUPERFAMILY SSF55811 49 114 6.63E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_03075 1985cd124de2887f208a13f1a5d16780 181 Gene3D G3DSA:3.90.79.10 31 151 1.0E-16 T 11-10-2018 AVL55_03075 1985cd124de2887f208a13f1a5d16780 181 Pfam PF00293 NUDIX domain 53 117 1.2E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AVL55_09125 a5a9871284af35277bbe9977683d6af9 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.1E-39 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AVL55_09125 a5a9871284af35277bbe9977683d6af9 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.472 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AVL55_09125 a5a9871284af35277bbe9977683d6af9 72 SMART SM00316 4 72 7.8E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_09125 a5a9871284af35277bbe9977683d6af9 72 Gene3D G3DSA:2.40.50.140 1 72 7.2E-38 T 11-10-2018 AVL55_09125 a5a9871284af35277bbe9977683d6af9 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.0E-28 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AVL55_09125 a5a9871284af35277bbe9977683d6af9 72 SUPERFAMILY SSF50249 1 70 2.94E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 95 1.2E-50 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 Gene3D G3DSA:4.10.520.10 1 99 4.1E-38 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.1E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 SMART SM00411 3 92 3.7E-42 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 SUPERFAMILY SSF47729 3 94 5.3E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_08255 e207cfdd86b591eadbb89cff2c973c04 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.531 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AVL55_13875 4bd8cdf54bd5f52682b4c67a49ca7520 370 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 365 1.7E-175 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AVL55_13875 4bd8cdf54bd5f52682b4c67a49ca7520 370 Gene3D G3DSA:3.20.20.105 1 364 5.7E-170 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AVL55_13875 4bd8cdf54bd5f52682b4c67a49ca7520 370 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 57.002 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AVL55_13875 4bd8cdf54bd5f52682b4c67a49ca7520 370 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 359 3.2E-93 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AVL55_13875 4bd8cdf54bd5f52682b4c67a49ca7520 370 SUPERFAMILY SSF51713 1 362 1.26E-163 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AVL55_13875 4bd8cdf54bd5f52682b4c67a49ca7520 370 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 364 3.8E-168 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 Pfam PF09278 MerR, DNA binding 44 106 3.6E-17 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 SMART SM00422 1 70 1.9E-31 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.2E-48 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 SUPERFAMILY SSF46955 1 126 8.06E-36 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.1E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.1E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.1E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 Gene3D G3DSA:1.10.1660.10 1 125 5.5E-35 T 11-10-2018 AVL55_05870 8725ed590a1d826bbed490dc7c8cf3a6 154 Pfam PF00376 MerR family regulatory protein 2 39 2.8E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_20075 e46b1f3bae8f813e2a8493d21a77ea1b 160 Gene3D G3DSA:3.30.70.990 9 93 1.2E-25 T 11-10-2018 IPR035570 UPF0234, N-terminal AVL55_20075 e46b1f3bae8f813e2a8493d21a77ea1b 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 28.387 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AVL55_20075 e46b1f3bae8f813e2a8493d21a77ea1b 160 SUPERFAMILY SSF89963 2 84 2.35E-28 T 11-10-2018 IPR036183 YajQ-like superfamily AVL55_20075 e46b1f3bae8f813e2a8493d21a77ea1b 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 2.9E-62 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AVL55_20075 e46b1f3bae8f813e2a8493d21a77ea1b 160 Gene3D G3DSA:3.30.70.860 94 160 8.5E-30 T 11-10-2018 IPR035571 UPF0234-like, C-terminal AVL55_20075 e46b1f3bae8f813e2a8493d21a77ea1b 160 SUPERFAMILY SSF89963 88 160 1.23E-29 T 11-10-2018 IPR036183 YajQ-like superfamily AVL55_19320 20e8741e5ea9e5b1e2faf96371abf399 299 PIRSF PIRSF005261 1 290 7.1E-70 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AVL55_19320 20e8741e5ea9e5b1e2faf96371abf399 299 SUPERFAMILY SSF118352 233 289 3.14E-17 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AVL55_19320 20e8741e5ea9e5b1e2faf96371abf399 299 Gene3D G3DSA:3.55.30.10 1 178 8.2E-56 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AVL55_19320 20e8741e5ea9e5b1e2faf96371abf399 299 Gene3D G3DSA:1.10.287.480 185 232 3.0E-18 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AVL55_19320 20e8741e5ea9e5b1e2faf96371abf399 299 Gene3D G3DSA:3.90.1280.10 233 290 1.7E-20 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AVL55_19320 20e8741e5ea9e5b1e2faf96371abf399 299 SUPERFAMILY SSF64397 5 239 6.28E-62 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AVL55_19320 20e8741e5ea9e5b1e2faf96371abf399 299 Pfam PF01430 Hsp33 protein 5 280 1.7E-78 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AVL55_03305 99ea3ec3754ad9350e82a3664e8df4d4 193 SUPERFAMILY SSF55136 6 185 1.44E-42 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AVL55_03305 99ea3ec3754ad9350e82a3664e8df4d4 193 Gene3D G3DSA:3.20.80.10 19 184 2.1E-34 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AVL55_03305 99ea3ec3754ad9350e82a3664e8df4d4 193 Pfam PF04832 SOUL heme-binding protein 13 184 2.6E-38 T 11-10-2018 IPR006917 SOUL haem-binding protein AVL55_18720 ebe375052908746204bc973b70c193e3 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 375 1.5E-158 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AVL55_18720 ebe375052908746204bc973b70c193e3 378 PIRSF PIRSF000267 2 378 3.3E-124 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AVL55_18720 ebe375052908746204bc973b70c193e3 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 1.6E-103 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 Gene3D G3DSA:3.30.70.1450 140 232 1.3E-20 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 SUPERFAMILY SSF116726 362 437 5.36E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 SUPERFAMILY SSF116726 147 226 8.24E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.1E-31 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.1E-31 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.1E-31 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.1E-31 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.1E-31 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 Gene3D G3DSA:3.40.50.720 2 139 3.4E-48 T 11-10-2018 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 Pfam PF02080 TrkA-C domain 156 225 1.2E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 Pfam PF02080 TrkA-C domain 391 451 1.1E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 SUPERFAMILY SSF51735 233 376 1.41E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 Pfam PF02254 TrkA-N domain 235 350 1.0E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 Pfam PF02254 TrkA-N domain 3 125 9.5E-29 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 SUPERFAMILY SSF51735 1 151 2.99E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 Gene3D G3DSA:3.40.50.720 233 366 4.3E-37 T 11-10-2018 AVL55_00085 d72f01c431123be82b93c625d48bdf0a 459 Gene3D G3DSA:3.30.70.1450 367 458 8.8E-31 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_00110 70d739b5cf724a6dd095712451aec781 369 SUPERFAMILY SSF102405 84 289 2.56E-41 T 11-10-2018 AVL55_00110 70d739b5cf724a6dd095712451aec781 369 Gene3D G3DSA:3.40.50.450 2 292 4.4E-96 T 11-10-2018 AVL55_00110 70d739b5cf724a6dd095712451aec781 369 Pfam PF02481 DNA recombination-mediator protein A 79 281 9.0E-77 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AVL55_00110 70d739b5cf724a6dd095712451aec781 369 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 289 3.8E-76 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AVL55_08900 bf0ae8c0716fddad7811782ef74ca41e 562 Gene3D G3DSA:1.25.40.10 141 314 1.4E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_08900 bf0ae8c0716fddad7811782ef74ca41e 562 SMART SM00448 14 130 0.0027 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08900 bf0ae8c0716fddad7811782ef74ca41e 562 SUPERFAMILY SSF48452 169 289 4.83E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_08900 bf0ae8c0716fddad7811782ef74ca41e 562 Gene3D G3DSA:3.40.50.2300 9 140 4.3E-14 T 11-10-2018 AVL55_08900 bf0ae8c0716fddad7811782ef74ca41e 562 SUPERFAMILY SSF52172 13 159 8.35E-16 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_08900 bf0ae8c0716fddad7811782ef74ca41e 562 Pfam PF00072 Response regulator receiver domain 17 130 7.7E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08010 b0d73be37bcaf826123a47a7691f8797 811 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 163 1.7E-10 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_08010 b0d73be37bcaf826123a47a7691f8797 811 Pfam PF00593 TonB dependent receptor 349 810 2.3E-19 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_08010 b0d73be37bcaf826123a47a7691f8797 811 SUPERFAMILY SSF56935 27 811 1.21E-74 T 11-10-2018 AVL55_08010 b0d73be37bcaf826123a47a7691f8797 811 Gene3D G3DSA:2.170.130.10 17 170 3.4E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_08010 b0d73be37bcaf826123a47a7691f8797 811 ProSitePatterns PS00018 EF-hand calcium-binding domain. 292 304 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AVL55_19305 562590fe18f75529c3dd8b9929f90c8b 390 Pfam PF07690 Major Facilitator Superfamily 10 328 6.8E-23 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_19305 562590fe18f75529c3dd8b9929f90c8b 390 Gene3D G3DSA:1.20.1250.20 2 188 3.0E-20 T 11-10-2018 AVL55_19305 562590fe18f75529c3dd8b9929f90c8b 390 SUPERFAMILY SSF103473 3 386 2.35E-42 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_19305 562590fe18f75529c3dd8b9929f90c8b 390 Gene3D G3DSA:1.20.1250.20 197 385 1.4E-20 T 11-10-2018 AVL55_14090 2ab4fc63c956dd5e88488c06b6c46d25 484 Pfam PF13440 Polysaccharide biosynthesis protein 31 319 1.8E-50 T 11-10-2018 AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 292 2.7E-85 T 11-10-2018 IPR017685 HTH-type transcriptional regulator ArgP AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 SUPERFAMILY SSF46785 1 106 1.79E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 Gene3D G3DSA:1.10.10.10 1 81 4.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 SUPERFAMILY SSF53850 89 288 1.14E-17 T 11-10-2018 AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 Gene3D G3DSA:3.40.190.290 85 293 2.1E-57 T 11-10-2018 AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 8.3E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 Pfam PF03466 LysR substrate binding domain 90 285 2.5E-10 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_00690 4bef78fa1d6455b0cd27d4933d4f50d2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_02420 d2f82d1d22592ea2a70f802163e477c2 122 SUPERFAMILY SSF103481 21 119 4.97E-8 T 11-10-2018 AVL55_02420 d2f82d1d22592ea2a70f802163e477c2 122 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 15 119 25.322 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AVL55_02420 d2f82d1d22592ea2a70f802163e477c2 122 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 15 120 4.7E-43 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AVL55_08240 2ed62f88f4902cdbce724b03cc02bb26 277 SUPERFAMILY SSF53335 46 258 4.06E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_08240 2ed62f88f4902cdbce724b03cc02bb26 277 Pfam PF08241 Methyltransferase domain 91 183 4.7E-10 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AVL55_08240 2ed62f88f4902cdbce724b03cc02bb26 277 Gene3D G3DSA:3.40.50.150 32 259 7.9E-23 T 11-10-2018 AVL55_01910 b5c263660749c79558b8772fa77a6d8f 355 Gene3D G3DSA:1.20.1090.10 171 355 1.1E-66 T 11-10-2018 AVL55_01910 b5c263660749c79558b8772fa77a6d8f 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 70.468 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AVL55_01910 b5c263660749c79558b8772fa77a6d8f 355 Gene3D G3DSA:3.40.50.1970 1 170 3.2E-64 T 11-10-2018 AVL55_01910 b5c263660749c79558b8772fa77a6d8f 355 SUPERFAMILY SSF56796 4 354 4.06E-113 T 11-10-2018 AVL55_01910 b5c263660749c79558b8772fa77a6d8f 355 Pfam PF01761 3-dehydroquinate synthase 65 323 2.0E-107 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AVL55_01910 b5c263660749c79558b8772fa77a6d8f 355 PIRSF PIRSF001455 9 352 1.1E-106 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AVL55_01910 b5c263660749c79558b8772fa77a6d8f 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 348 3.8E-117 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 Pfam PF01476 LysM domain 346 388 2.2E-9 T 11-10-2018 IPR018392 LysM domain AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 SMART SM00028 42 75 2.7E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 SMART SM00028 146 179 3.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 SMART SM00028 76 109 0.014 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 Pfam PF13432 Tetratricopeptide repeat 47 109 6.9E-7 T 11-10-2018 AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 Gene3D G3DSA:1.25.40.10 37 256 8.7E-45 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 SMART SM00257 345 389 7.6E-8 T 11-10-2018 IPR018392 LysM domain AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 Gene3D G3DSA:3.10.350.10 329 396 6.5E-11 T 11-10-2018 IPR036779 LysM domain superfamily AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 SUPERFAMILY SSF54106 345 388 7.98E-9 T 11-10-2018 AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 15 245 7.0E-64 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 Pfam PF13424 Tetratricopeptide repeat 112 175 2.4E-7 T 11-10-2018 AVL55_13780 5e7fb8af2a38e83290f2aa2ce1d608a9 396 SUPERFAMILY SSF48452 32 211 1.37E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_16620 8ebdaeb43794c23ebb184e0485521a5f 236 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 223 2.7E-14 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AVL55_16620 8ebdaeb43794c23ebb184e0485521a5f 236 SUPERFAMILY SSF56219 3 230 3.8E-35 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_16620 8ebdaeb43794c23ebb184e0485521a5f 236 Gene3D G3DSA:3.60.10.10 2 235 4.7E-42 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_01845 98411952f3f88ae612a6095754a5643e 268 Pfam PF07063 Domain of unknown function (DUF1338) 7 122 2.4E-24 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AVL55_01845 98411952f3f88ae612a6095754a5643e 268 Pfam PF07063 Domain of unknown function (DUF1338) 137 265 3.0E-26 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AVL55_01845 98411952f3f88ae612a6095754a5643e 268 Gene3D G3DSA:3.10.180.50 2 243 7.7E-93 T 11-10-2018 AVL55_01845 98411952f3f88ae612a6095754a5643e 268 SMART SM01150 5 266 1.0E-111 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AVL55_12110 a05fecacef4580c006775e91fe629796 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.6E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.6E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.6E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.6E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.6E-48 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 SMART SM00846 3 150 5.8E-99 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 SUPERFAMILY SSF55347 149 312 2.03E-80 T 11-10-2018 AVL55_12110 a05fecacef4580c006775e91fe629796 331 Gene3D G3DSA:3.40.50.720 4 326 1.8E-157 T 11-10-2018 AVL55_12110 a05fecacef4580c006775e91fe629796 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 5.8E-140 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 SUPERFAMILY SSF51735 3 166 3.13E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_12110 a05fecacef4580c006775e91fe629796 331 PIRSF PIRSF000149 1 331 3.4E-136 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 4.6E-71 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_12110 a05fecacef4580c006775e91fe629796 331 Gene3D G3DSA:3.30.360.10 149 314 1.8E-157 T 11-10-2018 AVL55_12110 a05fecacef4580c006775e91fe629796 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.0E-41 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_02170 4f30f8a991d6a7048669f9fc834ccc30 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 9.0E-21 T 11-10-2018 AVL55_02170 4f30f8a991d6a7048669f9fc834ccc30 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 9.0E-21 T 11-10-2018 AVL55_02170 4f30f8a991d6a7048669f9fc834ccc30 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 9.0E-21 T 11-10-2018 AVL55_02170 4f30f8a991d6a7048669f9fc834ccc30 99 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.5E-26 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AVL55_02170 4f30f8a991d6a7048669f9fc834ccc30 99 Pfam PF02416 mttA/Hcf106 family 4 49 9.9E-8 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AVL55_00885 9c7d0972a5ef4a3d900e91458401db95 176 Gene3D G3DSA:3.90.80.10 1 175 6.2E-72 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AVL55_00885 9c7d0972a5ef4a3d900e91458401db95 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AVL55_00885 9c7d0972a5ef4a3d900e91458401db95 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.823 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AVL55_00885 9c7d0972a5ef4a3d900e91458401db95 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.2E-54 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AVL55_00885 9c7d0972a5ef4a3d900e91458401db95 176 SUPERFAMILY SSF50324 4 173 1.11E-66 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AVL55_16660 56165ded1c8e3e03fd9958512c135fe5 192 SUPERFAMILY SSF47473 29 190 1.03E-15 T 11-10-2018 IPR011992 EF-hand domain pair AVL55_16660 56165ded1c8e3e03fd9958512c135fe5 192 Gene3D G3DSA:1.10.238.10 8 103 2.0E-8 T 11-10-2018 AVL55_16660 56165ded1c8e3e03fd9958512c135fe5 192 ProSitePatterns PS00018 EF-hand calcium-binding domain. 145 157 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AVL55_16660 56165ded1c8e3e03fd9958512c135fe5 192 Gene3D G3DSA:1.10.238.10 125 190 4.1E-10 T 11-10-2018 AVL55_16660 56165ded1c8e3e03fd9958512c135fe5 192 Pfam PF13202 EF hand 140 158 4.5E-4 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 Gene3D G3DSA:3.40.50.720 7 331 1.8E-145 T 11-10-2018 AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 PIRSF PIRSF000148 4 338 2.5E-134 T 11-10-2018 AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 335 6.7E-134 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 SMART SM00859 6 121 1.1E-41 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 SUPERFAMILY SSF55347 131 321 5.66E-76 T 11-10-2018 AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 Gene3D G3DSA:3.30.360.10 130 317 1.8E-145 T 11-10-2018 AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 4.0E-61 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 36.904 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 SUPERFAMILY SSF51735 5 159 2.73E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_12585 3c116973a603a7fe3c059cb9bfc26bc0 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 119 1.6E-31 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AVL55_09080 499740ff41a880e913072768df1cc89e 277 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 47 205 1.7E-23 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AVL55_09080 499740ff41a880e913072768df1cc89e 277 Gene3D G3DSA:3.30.70.1230 42 233 1.7E-26 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_09080 499740ff41a880e913072768df1cc89e 277 SUPERFAMILY SSF55073 47 204 9.42E-27 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_09080 499740ff41a880e913072768df1cc89e 277 SMART SM00044 21 212 1.2E-4 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AVL55_03360 cc304f24c7cb31a1a925e0b580ac08fb 267 Pfam PF10411 Disulfide bond isomerase protein N-terminus 60 110 7.6E-13 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AVL55_03360 cc304f24c7cb31a1a925e0b580ac08fb 267 Gene3D G3DSA:3.40.30.10 111 266 1.1E-50 T 11-10-2018 AVL55_03360 cc304f24c7cb31a1a925e0b580ac08fb 267 Gene3D G3DSA:3.10.450.70 51 110 3.3E-19 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AVL55_03360 cc304f24c7cb31a1a925e0b580ac08fb 267 SUPERFAMILY SSF52833 132 265 2.79E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_03360 cc304f24c7cb31a1a925e0b580ac08fb 267 ProSitePatterns PS00194 Thioredoxin family active site. 147 165 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AVL55_03360 cc304f24c7cb31a1a925e0b580ac08fb 267 Pfam PF13098 Thioredoxin-like domain 140 263 4.3E-27 T 11-10-2018 IPR012336 Thioredoxin-like fold AVL55_03360 cc304f24c7cb31a1a925e0b580ac08fb 267 SUPERFAMILY SSF54423 54 111 5.1E-12 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 544 24.65 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR00701 60kDa inner membrane protein signature 85 106 1.8E-91 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR00701 60kDa inner membrane protein signature 227 245 1.8E-91 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR00701 60kDa inner membrane protein signature 471 493 1.8E-91 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR00701 60kDa inner membrane protein signature 173 193 1.8E-91 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR00701 60kDa inner membrane protein signature 260 275 1.8E-91 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR00701 60kDa inner membrane protein signature 333 353 1.8E-91 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.8E-91 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR00701 60kDa inner membrane protein signature 424 447 1.8E-91 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR00701 60kDa inner membrane protein signature 508 531 1.8E-91 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 361 2.8E-114 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR01900 YidC translocation/secretion protein signature 497 521 1.3E-23 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR01900 YidC translocation/secretion protein signature 348 364 1.3E-23 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 PRINTS PR01900 YidC translocation/secretion protein signature 477 492 1.3E-23 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 362 540 9.8E-68 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 Gene3D G3DSA:2.70.98.90 75 342 6.6E-94 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 Pfam PF02096 60Kd inner membrane protein 363 541 5.9E-58 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AVL55_20080 d96f42339a9428570f4b1cf456942ff6 552 Pfam PF14849 YidC periplasmic domain 80 351 3.5E-83 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain AVL55_10150 02fea7e44b583ce8bfb6f89d20a8321a 58 Pfam PF04957 Ribosome modulation factor 1 54 8.3E-31 T 11-10-2018 IPR007040 Ribosome modulation factor AVL55_10150 02fea7e44b583ce8bfb6f89d20a8321a 58 Gene3D G3DSA:1.10.10.620 1 56 2.8E-29 T 11-10-2018 IPR023200 Ribosome modulation factor domain superfamily AVL55_10150 02fea7e44b583ce8bfb6f89d20a8321a 58 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 2.0E-18 T 11-10-2018 IPR007040 Ribosome modulation factor AVL55_10150 02fea7e44b583ce8bfb6f89d20a8321a 58 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 32.177 T 11-10-2018 IPR007040 Ribosome modulation factor AVL55_04180 3ec4e4b5359247eac9fb1c72c8ea8883 380 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 6 367 4.0E-79 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AVL55_04180 3ec4e4b5359247eac9fb1c72c8ea8883 380 Gene3D G3DSA:2.30.40.10 9 373 3.7E-106 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_04180 3ec4e4b5359247eac9fb1c72c8ea8883 380 Gene3D G3DSA:3.20.20.140 52 344 3.7E-106 T 11-10-2018 AVL55_04180 3ec4e4b5359247eac9fb1c72c8ea8883 380 PIRSF PIRSF038994 3 380 5.8E-104 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AVL55_04180 3ec4e4b5359247eac9fb1c72c8ea8883 380 SUPERFAMILY SSF51556 51 350 1.84E-90 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_04180 3ec4e4b5359247eac9fb1c72c8ea8883 380 Pfam PF01979 Amidohydrolase family 48 370 9.0E-21 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AVL55_04180 3ec4e4b5359247eac9fb1c72c8ea8883 380 SUPERFAMILY SSF51338 9 375 7.77E-6 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_19835 4c7c88b002072208a4657f41ab8d3c45 523 SUPERFAMILY SSF52540 98 248 5.13E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00615 23608a1677283601d8195cbd085edea5 343 Pfam PF00005 ABC transporter 18 154 4.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_00615 23608a1677283601d8195cbd085edea5 343 SUPERFAMILY SSF52540 1 233 1.12E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00615 23608a1677283601d8195cbd085edea5 343 Gene3D G3DSA:2.40.50.140 276 331 2.7E-8 T 11-10-2018 AVL55_00615 23608a1677283601d8195cbd085edea5 343 Pfam PF08402 TOBE domain 269 331 1.7E-8 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AVL55_00615 23608a1677283601d8195cbd085edea5 343 Gene3D G3DSA:2.40.50.940 215 275 2.7E-8 T 11-10-2018 AVL55_00615 23608a1677283601d8195cbd085edea5 343 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_00615 23608a1677283601d8195cbd085edea5 343 Gene3D G3DSA:3.40.50.300 1 214 8.5E-54 T 11-10-2018 AVL55_00615 23608a1677283601d8195cbd085edea5 343 SUPERFAMILY SSF50331 256 331 1.81E-7 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AVL55_00615 23608a1677283601d8195cbd085edea5 343 SMART SM00382 26 203 4.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 4.4E-59 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 67.686 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 Gene3D G3DSA:3.40.47.10 6 435 4.3E-109 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 1.9E-125 T 11-10-2018 IPR002155 Thiolase GO:0016747 AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 PIRSF PIRSF000429 9 436 1.7E-113 T 11-10-2018 IPR002155 Thiolase GO:0016747 AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 SUPERFAMILY SSF53901 15 294 5.34E-58 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 Pfam PF02803 Thiolase, C-terminal domain 295 434 1.7E-36 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 5.4E-250 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AVL55_06580 61d9249c9f5e096c9b88c7e88667c8f2 436 SUPERFAMILY SSF53901 296 434 3.7E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_11925 2fe98b49c8de4dc0f35229a64d009735 559 SUPERFAMILY SSF56801 15 550 6.41E-112 T 11-10-2018 AVL55_11925 2fe98b49c8de4dc0f35229a64d009735 559 Gene3D G3DSA:3.30.300.30 438 544 3.4E-7 T 11-10-2018 AVL55_11925 2fe98b49c8de4dc0f35229a64d009735 559 Pfam PF00501 AMP-binding enzyme 27 437 4.6E-89 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AVL55_11925 2fe98b49c8de4dc0f35229a64d009735 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 11-10-2018 IPR020845 AMP-binding, conserved site AVL55_11925 2fe98b49c8de4dc0f35229a64d009735 559 Gene3D G3DSA:3.40.50.12780 9 433 6.1E-83 T 11-10-2018 AVL55_18320 ab3a4d81b281e7dbe0c837dbce838c8a 436 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 206 382 3.8E-9 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_18320 ab3a4d81b281e7dbe0c837dbce838c8a 436 Gene3D G3DSA:3.40.190.10 206 381 1.7E-13 T 11-10-2018 AVL55_18320 ab3a4d81b281e7dbe0c837dbce838c8a 436 Gene3D G3DSA:3.40.190.10 278 372 1.7E-13 T 11-10-2018 AVL55_18320 ab3a4d81b281e7dbe0c837dbce838c8a 436 SUPERFAMILY SSF53850 201 411 1.3E-19 T 11-10-2018 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 PIRSF PIRSF002133 1 124 7.7E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 5.0E-42 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 SUPERFAMILY SSF50249 3 123 1.63E-50 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.7E-69 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 Gene3D G3DSA:2.40.50.140 1 124 2.1E-62 T 11-10-2018 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.9E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.9E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.9E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.9E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.9E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.9E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_18230 3d27b2ecb5ea02ba6eaa1b4933358519 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.02 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01905 bec699fac62f2a1e48934a1b634dd29e 490 Gene3D G3DSA:3.30.70.1070 388 485 1.4E-15 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AVL55_04245 13b889bdf9fa4a97c218e476224c2bbf 85 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 66 4.1E-7 T 11-10-2018 IPR022789 Antitoxin ParD AVL55_04245 13b889bdf9fa4a97c218e476224c2bbf 85 SUPERFAMILY SSF47598 2 44 2.78E-7 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AVL55_04245 13b889bdf9fa4a97c218e476224c2bbf 85 Gene3D G3DSA:1.10.8.1250 12 84 2.0E-10 T 11-10-2018 IPR038296 Antitoxin ParD superfamily AVL55_00455 918c6211c8a239fcad91e0947cec3d1d 697 Gene3D G3DSA:2.40.170.20 167 697 4.2E-125 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_00455 918c6211c8a239fcad91e0947cec3d1d 697 Gene3D G3DSA:2.170.130.10 20 166 1.3E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_00455 918c6211c8a239fcad91e0947cec3d1d 697 SUPERFAMILY SSF56935 23 697 6.0E-112 T 11-10-2018 AVL55_00455 918c6211c8a239fcad91e0947cec3d1d 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 159 8.3E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_00455 918c6211c8a239fcad91e0947cec3d1d 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 697 2.0E-80 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AVL55_00455 918c6211c8a239fcad91e0947cec3d1d 697 Pfam PF00593 TonB dependent receptor 237 696 2.4E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 Gene3D G3DSA:3.30.70.1440 652 847 0.0 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 SUPERFAMILY SSF82693 137 324 2.09E-21 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 SUPERFAMILY SSF82693 554 654 9.94E-14 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 SUPERFAMILY SSF82714 182 266 3.53E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.9E-80 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 2.9E-80 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.9E-80 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.9E-80 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.9E-80 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.9E-80 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 2.9E-80 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.9E-80 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.9E-80 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 Gene3D G3DSA:3.30.70.1430 556 651 0.0 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 Pfam PF00873 AcrB/AcrD/AcrF family 4 1006 4.7E-298 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 Gene3D G3DSA:3.30.70.1430 40 798 0.0 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 SUPERFAMILY SSF82866 291 489 4.45E-48 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 Gene3D G3DSA:1.20.1640.10 502 1004 0.0 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 SUPERFAMILY SSF82714 702 787 2.22E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 Gene3D G3DSA:3.30.2090.10 701 790 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 SUPERFAMILY SSF82693 40 134 1.02E-27 T 11-10-2018 AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_03085 f22c424dc96ce72f5de4c977477a2ff2 1035 SUPERFAMILY SSF82866 789 1009 5.75E-47 T 11-10-2018 AVL55_01130 2ebf7b70a80544b941ab4b38f076401e 235 SMART SM00448 4 114 8.2E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_01130 2ebf7b70a80544b941ab4b38f076401e 235 Pfam PF00072 Response regulator receiver domain 6 113 9.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_01130 2ebf7b70a80544b941ab4b38f076401e 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 1.3E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_01130 2ebf7b70a80544b941ab4b38f076401e 235 Gene3D G3DSA:1.10.10.10 123 233 1.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_01130 2ebf7b70a80544b941ab4b38f076401e 235 SUPERFAMILY SSF46894 132 230 3.12E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_01130 2ebf7b70a80544b941ab4b38f076401e 235 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-32 T 11-10-2018 AVL55_01130 2ebf7b70a80544b941ab4b38f076401e 235 SMART SM00862 153 229 8.7E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_01130 2ebf7b70a80544b941ab4b38f076401e 235 SUPERFAMILY SSF52172 2 124 1.31E-35 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_07275 51d49b508df102700c9e27d7195334bf 343 Gene3D G3DSA:1.20.970.10 7 70 4.1E-19 T 11-10-2018 AVL55_07275 51d49b508df102700c9e27d7195334bf 343 Pfam PF00591 Glycosyl transferase family, a/b domain 76 323 3.0E-95 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_07275 51d49b508df102700c9e27d7195334bf 343 SUPERFAMILY SSF47648 6 70 2.09E-16 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_07275 51d49b508df102700c9e27d7195334bf 343 SUPERFAMILY SSF52418 73 332 6.8E-89 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_07275 51d49b508df102700c9e27d7195334bf 343 Gene3D G3DSA:3.40.1030.10 74 342 8.0E-99 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_07275 51d49b508df102700c9e27d7195334bf 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 335 38.009 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AVL55_07275 51d49b508df102700c9e27d7195334bf 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 334 8.7E-121 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AVL55_07275 51d49b508df102700c9e27d7195334bf 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 66 1.2E-14 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 PIRSF PIRSF039144 1 112 5.0E-55 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 Gene3D G3DSA:3.30.70.120 1 112 8.8E-47 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 SMART SM00938 4 105 5.9E-66 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.2E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AVL55_01740 7941d919c1085f14ddf1ffa16bf6baff 112 SUPERFAMILY SSF54913 1 112 5.72E-45 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AVL55_06560 d4e390fb85618b87ea4f31b4b1726c4d 358 SMART SM00327 87 288 2.1E-19 T 11-10-2018 IPR002035 von Willebrand factor, type A AVL55_06560 d4e390fb85618b87ea4f31b4b1726c4d 358 Pfam PF00092 von Willebrand factor type A domain 90 282 6.2E-27 T 11-10-2018 IPR002035 von Willebrand factor, type A AVL55_06560 d4e390fb85618b87ea4f31b4b1726c4d 358 SUPERFAMILY SSF53300 84 265 6.38E-40 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_06560 d4e390fb85618b87ea4f31b4b1726c4d 358 Gene3D G3DSA:3.40.50.410 87 288 8.5E-56 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_15110 61963d223fdbd6c4f7f7121a02a8f168 360 Gene3D G3DSA:3.40.190.10 168 266 8.3E-53 T 11-10-2018 AVL55_15110 61963d223fdbd6c4f7f7121a02a8f168 360 Pfam PF03466 LysR substrate binding domain 93 291 1.7E-21 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_15110 61963d223fdbd6c4f7f7121a02a8f168 360 Gene3D G3DSA:1.10.10.10 1 85 6.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_15110 61963d223fdbd6c4f7f7121a02a8f168 360 Gene3D G3DSA:3.40.190.10 87 291 8.3E-53 T 11-10-2018 AVL55_15110 61963d223fdbd6c4f7f7121a02a8f168 360 SUPERFAMILY SSF46785 2 82 1.6E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_15110 61963d223fdbd6c4f7f7121a02a8f168 360 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.4E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_15110 61963d223fdbd6c4f7f7121a02a8f168 360 SUPERFAMILY SSF53850 87 292 1.52E-36 T 11-10-2018 AVL55_09600 460d0026ad56761d344671fc5939b74d 939 Gene3D G3DSA:3.40.50.11610 727 933 4.9E-171 T 11-10-2018 AVL55_09600 460d0026ad56761d344671fc5939b74d 939 Gene3D G3DSA:3.40.50.970 172 537 7.5E-146 T 11-10-2018 AVL55_09600 460d0026ad56761d344671fc5939b74d 939 Gene3D G3DSA:3.40.50.12470 560 806 4.9E-171 T 11-10-2018 AVL55_09600 460d0026ad56761d344671fc5939b74d 939 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 935 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AVL55_09600 460d0026ad56761d344671fc5939b74d 939 Pfam PF00676 Dehydrogenase E1 component 220 521 8.8E-52 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AVL55_09600 460d0026ad56761d344671fc5939b74d 939 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 6.1E-18 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AVL55_09600 460d0026ad56761d344671fc5939b74d 939 SMART SM00861 597 790 4.8E-61 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AVL55_09600 460d0026ad56761d344671fc5939b74d 939 SUPERFAMILY SSF52518 125 550 3.79E-86 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_09600 460d0026ad56761d344671fc5939b74d 939 Pfam PF02779 Transketolase, pyrimidine binding domain 596 791 6.3E-65 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AVL55_09600 460d0026ad56761d344671fc5939b74d 939 SUPERFAMILY SSF52518 580 797 1.28E-51 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_09600 460d0026ad56761d344671fc5939b74d 939 Gene3D G3DSA:1.10.287.1150 90 171 2.0E-26 T 11-10-2018 AVL55_09600 460d0026ad56761d344671fc5939b74d 939 PIRSF PIRSF000157 1 938 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AVL55_09600 460d0026ad56761d344671fc5939b74d 939 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 794 936 3.9E-53 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AVL55_14615 3354111d28ff8eca84fbe6c27368c7bb 182 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 13 174 7.5E-49 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AVL55_14615 3354111d28ff8eca84fbe6c27368c7bb 182 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AVL55_14615 3354111d28ff8eca84fbe6c27368c7bb 182 Gene3D G3DSA:3.10.180.10 2 174 3.3E-59 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_14615 3354111d28ff8eca84fbe6c27368c7bb 182 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 166 1.1E-19 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AVL55_14615 3354111d28ff8eca84fbe6c27368c7bb 182 SUPERFAMILY SSF54593 23 168 2.15E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_06715 9f9a63a230e5352e3febedcb71f8b05f 238 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 217 1.0E-25 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AVL55_06715 9f9a63a230e5352e3febedcb71f8b05f 238 SUPERFAMILY SSF52096 2 208 6.01E-41 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_06715 9f9a63a230e5352e3febedcb71f8b05f 238 Gene3D G3DSA:3.90.226.10 2 229 1.0E-42 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 42.851 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 10 34 5.9E-94 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 322 345 5.9E-94 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 248 274 5.9E-94 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 174 198 5.9E-94 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 83 111 5.9E-94 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 124 141 5.9E-94 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 213 241 5.9E-94 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 Gene3D G3DSA:3.40.50.300 66 279 2.1E-37 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 Gene3D G3DSA:3.30.230.10 303 455 1.8E-22 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 SUPERFAMILY SSF52540 68 291 3.58E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 SMART SM00382 91 244 1.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 2.4E-219 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 SUPERFAMILY SSF54211 255 454 1.52E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 430 4.7E-10 T 11-10-2018 AVL55_13385 2c8876d78d5f2360a77cbf5835cbae43 455 Pfam PF13481 AAA domain 75 222 1.7E-10 T 11-10-2018 AVL55_03210 21c1a4e24c3c0f7e742403949ef06f04 926 SMART SM00710 335 359 5900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_03210 21c1a4e24c3c0f7e742403949ef06f04 926 SMART SM00710 686 708 39.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_03210 21c1a4e24c3c0f7e742403949ef06f04 926 SMART SM00710 250 272 850.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_03210 21c1a4e24c3c0f7e742403949ef06f04 926 SMART SM00710 529 550 5700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_03210 21c1a4e24c3c0f7e742403949ef06f04 926 SMART SM00710 771 795 2200.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_15960 39470b17eb31053f2a2a3d4271919f1a 558 SUPERFAMILY SSF81340 9 428 5.75E-81 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AVL55_15960 39470b17eb31053f2a2a3d4271919f1a 558 Gene3D G3DSA:1.10.3080.10 12 425 4.9E-81 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AVL55_15960 39470b17eb31053f2a2a3d4271919f1a 558 PRINTS PR00762 Chloride channel signature 112 131 9.6E-14 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AVL55_15960 39470b17eb31053f2a2a3d4271919f1a 558 PRINTS PR00762 Chloride channel signature 163 182 9.6E-14 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AVL55_15960 39470b17eb31053f2a2a3d4271919f1a 558 PRINTS PR00762 Chloride channel signature 358 374 9.6E-14 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AVL55_15960 39470b17eb31053f2a2a3d4271919f1a 558 Pfam PF00654 Voltage gated chloride channel 87 407 3.1E-67 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 Pfam PF00106 short chain dehydrogenase 9 197 1.0E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 215 2.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 Gene3D G3DSA:3.40.50.720 3 230 1.1E-61 T 11-10-2018 AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 SUPERFAMILY SSF51735 7 217 3.36E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_14665 49c744f0aab221bdd1c24ce6ea6da29b 230 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_00095 aad62f57bd7dd444e2c06e382da935c4 316 Gene3D G3DSA:3.40.50.170 1 207 2.2E-85 T 11-10-2018 AVL55_00095 aad62f57bd7dd444e2c06e382da935c4 316 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_00095 aad62f57bd7dd444e2c06e382da935c4 316 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 305 37.451 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AVL55_00095 aad62f57bd7dd444e2c06e382da935c4 316 Pfam PF02911 Formyl transferase, C-terminal domain 205 301 4.1E-30 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_00095 aad62f57bd7dd444e2c06e382da935c4 316 SUPERFAMILY SSF53328 5 208 2.35E-67 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_00095 aad62f57bd7dd444e2c06e382da935c4 316 SUPERFAMILY SSF50486 206 309 9.42E-34 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AVL55_00095 aad62f57bd7dd444e2c06e382da935c4 316 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 308 1.6E-108 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AVL55_00095 aad62f57bd7dd444e2c06e382da935c4 316 Gene3D G3DSA:3.10.25.10 208 312 5.8E-36 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_00095 aad62f57bd7dd444e2c06e382da935c4 316 Pfam PF00551 Formyl transferase 7 184 6.4E-53 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Gene3D G3DSA:2.120.10.30 26 222 6.7E-32 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Gene3D G3DSA:2.120.10.30 377 621 2.4E-25 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Pfam PF01979 Amidohydrolase family 957 1064 6.5E-14 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 SUPERFAMILY SSF51556 734 1029 3.17E-39 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Gene3D G3DSA:2.120.10.30 227 372 1.3E-10 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Gene3D G3DSA:3.30.110.90 735 1028 4.0E-42 T 11-10-2018 AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Gene3D G3DSA:3.40.50.10910 801 909 4.0E-42 T 11-10-2018 AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 SUPERFAMILY SSF51338 676 1066 1.75E-17 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 SUPERFAMILY SSF82171 36 220 9.42E-26 T 11-10-2018 AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 202 218 0.0088 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 411 434 0.0023 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 263 279 0.014 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 456 485 0.0011 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 95 129 5.2E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Gene3D G3DSA:1.20.58.520 910 1005 4.0E-42 T 11-10-2018 AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 Gene3D G3DSA:2.30.40.10 683 1061 4.0E-42 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_17745 8db3f30264b1c358cae2b002187c8984 1111 SUPERFAMILY SSF82171 147 579 3.01E-50 T 11-10-2018 AVL55_03455 0b16fe9b5ef18cdfd177a09c87140d72 245 Gene3D G3DSA:3.90.550.10 2 234 1.6E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_03455 0b16fe9b5ef18cdfd177a09c87140d72 245 Pfam PF00535 Glycosyl transferase family 2 7 163 2.1E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_03455 0b16fe9b5ef18cdfd177a09c87140d72 245 SUPERFAMILY SSF53448 4 233 5.25E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_07765 4e383082fdc8e6a2af86d2f9ee12bdc0 805 Gene3D G3DSA:3.40.50.1820 532 804 5.5E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_07765 4e383082fdc8e6a2af86d2f9ee12bdc0 805 SUPERFAMILY SSF82171 113 529 2.22E-9 T 11-10-2018 AVL55_07765 4e383082fdc8e6a2af86d2f9ee12bdc0 805 Gene3D G3DSA:2.120.10.30 84 283 2.6E-5 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_07765 4e383082fdc8e6a2af86d2f9ee12bdc0 805 SUPERFAMILY SSF53474 540 797 5.88E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_07765 4e383082fdc8e6a2af86d2f9ee12bdc0 805 Pfam PF00326 Prolyl oligopeptidase family 643 798 3.4E-24 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_01820 a2688f79e2b9d6f886b8967da15eb788 231 Pfam PF11201 Protein of unknown function (DUF2982) 73 223 9.8E-59 T 11-10-2018 IPR021367 Protein of unknown function DUF2982 AVL55_02910 397ce4a98b9e69581e040f2fcfbec721 199 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 71 88 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AVL55_02910 397ce4a98b9e69581e040f2fcfbec721 199 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 194 5.6E-37 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AVL55_02910 397ce4a98b9e69581e040f2fcfbec721 199 Gene3D G3DSA:2.40.100.10 32 197 8.0E-53 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_02910 397ce4a98b9e69581e040f2fcfbec721 199 SUPERFAMILY SSF50891 35 196 4.24E-47 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_02910 397ce4a98b9e69581e040f2fcfbec721 199 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 65 8.6E-9 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AVL55_02910 397ce4a98b9e69581e040f2fcfbec721 199 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 164 8.6E-9 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AVL55_02910 397ce4a98b9e69581e040f2fcfbec721 199 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 8.6E-9 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AVL55_02910 397ce4a98b9e69581e040f2fcfbec721 199 PIRSF PIRSF001467 18 195 3.7E-21 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AVL55_14735 8b3054d6237de0f62598be175faf4e0d 136 SUPERFAMILY SSF58113 22 131 8.76E-5 T 11-10-2018 AVL55_14735 8b3054d6237de0f62598be175faf4e0d 136 Gene3D G3DSA:1.10.287.700 28 136 1.3E-5 T 11-10-2018 AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 Gene3D G3DSA:2.40.30.10 9 109 2.1E-13 T 11-10-2018 AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 Gene3D G3DSA:3.10.20.30 235 327 1.6E-11 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 SUPERFAMILY SSF52343 102 229 7.86E-23 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 106 115 1.4E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.4E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 121 140 1.4E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 Pfam PF00970 Oxidoreductase FAD-binding domain 18 111 3.9E-10 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 SUPERFAMILY SSF54292 227 327 1.02E-15 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 Pfam PF00175 Oxidoreductase NAD-binding domain 122 215 9.0E-10 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 SUPERFAMILY SSF63380 3 114 2.01E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_06230 3e3a14669cd7f86962f2b557870a4313 327 Gene3D G3DSA:3.40.50.80 112 233 2.0E-20 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_08095 dd178c32b3fc22692a7b1281e4ab3900 144 ProSitePatterns PS00938 Initiation factor 3 signature. 31 44 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AVL55_08095 dd178c32b3fc22692a7b1281e4ab3900 144 Gene3D G3DSA:3.30.110.10 49 144 7.5E-40 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AVL55_08095 dd178c32b3fc22692a7b1281e4ab3900 144 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 144 22.59 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AVL55_08095 dd178c32b3fc22692a7b1281e4ab3900 144 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 144 8.9E-63 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AVL55_08095 dd178c32b3fc22692a7b1281e4ab3900 144 Gene3D G3DSA:3.10.20.80 1 48 1.2E-19 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AVL55_08095 dd178c32b3fc22692a7b1281e4ab3900 144 SUPERFAMILY SSF54364 1 51 1.44E-18 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AVL55_08095 dd178c32b3fc22692a7b1281e4ab3900 144 SUPERFAMILY SSF55200 56 144 6.41E-35 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AVL55_08095 dd178c32b3fc22692a7b1281e4ab3900 144 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 49 2.3E-19 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AVL55_08095 dd178c32b3fc22692a7b1281e4ab3900 144 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 56 142 1.7E-37 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AVL55_02780 c4e7a8be081929e6118d66769b954fc0 465 SMART SM00670 10 148 2.2E-7 T 11-10-2018 IPR002716 PIN domain AVL55_02780 c4e7a8be081929e6118d66769b954fc0 465 Pfam PF13638 PIN domain 12 157 9.1E-35 T 11-10-2018 IPR002716 PIN domain AVL55_02780 c4e7a8be081929e6118d66769b954fc0 465 Gene3D G3DSA:3.40.50.300 253 463 3.1E-64 T 11-10-2018 AVL55_02780 c4e7a8be081929e6118d66769b954fc0 465 SUPERFAMILY SSF88723 10 159 1.31E-14 T 11-10-2018 IPR029060 PIN-like domain superfamily AVL55_02780 c4e7a8be081929e6118d66769b954fc0 465 SUPERFAMILY SSF52540 254 444 9.07E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02780 c4e7a8be081929e6118d66769b954fc0 465 Pfam PF02562 PhoH-like protein 255 459 1.7E-53 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AVL55_02780 c4e7a8be081929e6118d66769b954fc0 465 Gene3D G3DSA:3.40.50.1010 6 162 1.6E-27 T 11-10-2018 AVL55_17630 39f1fe7d283830c307273195b91b524b 488 SUPERFAMILY SSF143968 323 486 1.03E-67 T 11-10-2018 AVL55_17630 39f1fe7d283830c307273195b91b524b 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.6E-175 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AVL55_17630 39f1fe7d283830c307273195b91b524b 488 Gene3D G3DSA:3.40.1670.10 337 454 1.1E-52 T 11-10-2018 AVL55_17630 39f1fe7d283830c307273195b91b524b 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.434 T 11-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AVL55_17630 39f1fe7d283830c307273195b91b524b 488 SUPERFAMILY SSF50475 3 322 8.24E-130 T 11-10-2018 AVL55_17630 39f1fe7d283830c307273195b91b524b 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 6.6E-181 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AVL55_17630 39f1fe7d283830c307273195b91b524b 488 Gene3D G3DSA:1.20.5.570 455 488 5.8E-15 T 11-10-2018 AVL55_07545 8d08b56c0e60a7c939964d7319e4ac38 185 Pfam PF03061 Thioesterase superfamily 25 98 1.8E-18 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AVL55_07545 8d08b56c0e60a7c939964d7319e4ac38 185 Gene3D G3DSA:3.10.129.10 2 163 3.9E-50 T 11-10-2018 AVL55_07545 8d08b56c0e60a7c939964d7319e4ac38 185 SUPERFAMILY SSF54637 9 155 1.65E-42 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_00850 cd88c60649d357dc25ea58397adef229 355 SUPERFAMILY SSF53756 10 276 5.89E-8 T 11-10-2018 AVL55_00850 cd88c60649d357dc25ea58397adef229 355 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 307 7.0E-73 T 11-10-2018 IPR005262 Conserved hypothetical protein CHP00661 AVL55_00850 cd88c60649d357dc25ea58397adef229 355 Pfam PF13528 Glycosyl transferase family 1 1 301 4.5E-37 T 11-10-2018 AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 433 2.3E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 Pfam PF08448 PAS fold 153 258 1.1E-10 T 11-10-2018 IPR013656 PAS fold-4 AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 Pfam PF13426 PAS domain 30 133 9.5E-12 T 11-10-2018 IPR000014 PAS domain AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 SUPERFAMILY SSF55785 9 131 3.14E-13 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 SMART SM00091 142 210 4.5 T 11-10-2018 IPR000014 PAS domain AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 SMART SM00091 18 87 2.1 T 11-10-2018 IPR000014 PAS domain AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 Gene3D G3DSA:1.10.287.950 247 437 1.7E-49 T 11-10-2018 AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 SMART SM00283 229 433 2.9E-22 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 SUPERFAMILY SSF55785 152 254 5.23E-22 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 Gene3D G3DSA:3.30.450.20 20 130 5.7E-12 T 11-10-2018 AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 SUPERFAMILY SSF58104 242 434 3.01E-52 T 11-10-2018 AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 Gene3D G3DSA:3.30.450.20 131 246 3.1E-18 T 11-10-2018 AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 134 5.7E-11 T 11-10-2018 IPR000014 PAS domain AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 263 1.2E-13 T 11-10-2018 IPR000014 PAS domain AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 SMART SM00086 215 257 0.099 T 11-10-2018 IPR001610 PAC motif AVL55_16435 348a349e7929d7b33c7b74d808a444aa 438 SMART SM00086 93 135 15.0 T 11-10-2018 IPR001610 PAC motif AVL55_17900 44aecd7565ff2c4b6364c6580adddfe9 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.17 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AVL55_17900 44aecd7565ff2c4b6364c6580adddfe9 145 Gene3D G3DSA:3.50.80.10 1 145 6.6E-56 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AVL55_17900 44aecd7565ff2c4b6364c6580adddfe9 145 SUPERFAMILY SSF69500 4 143 2.22E-54 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AVL55_17900 44aecd7565ff2c4b6364c6580adddfe9 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 143 9.1E-62 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AVL55_17900 44aecd7565ff2c4b6364c6580adddfe9 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 142 1.4E-53 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AVL55_01320 a8e1e4a1dfa48ca5db756cd1029f2623 535 Pfam PF08019 Domain of unknown function (DUF1705) 59 208 7.8E-33 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AVL55_01320 a8e1e4a1dfa48ca5db756cd1029f2623 535 Gene3D G3DSA:3.40.720.10 212 535 1.7E-87 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AVL55_01320 a8e1e4a1dfa48ca5db756cd1029f2623 535 Pfam PF00884 Sulfatase 235 517 1.3E-49 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AVL55_01320 a8e1e4a1dfa48ca5db756cd1029f2623 535 SUPERFAMILY SSF53649 236 523 3.49E-22 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AVL55_11300 d2f1965ccf4b2901cd55b2e818820732 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 339 4.4E-40 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AVL55_11300 d2f1965ccf4b2901cd55b2e818820732 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.9E-148 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_11300 d2f1965ccf4b2901cd55b2e818820732 346 Gene3D G3DSA:3.90.650.10 172 345 3.8E-70 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AVL55_11300 d2f1965ccf4b2901cd55b2e818820732 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 65 165 8.7E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AVL55_11300 d2f1965ccf4b2901cd55b2e818820732 346 Gene3D G3DSA:3.30.1330.10 7 171 6.9E-67 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AVL55_11300 d2f1965ccf4b2901cd55b2e818820732 346 SUPERFAMILY SSF55326 8 171 2.99E-52 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AVL55_11300 d2f1965ccf4b2901cd55b2e818820732 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 344 46.754 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AVL55_11300 d2f1965ccf4b2901cd55b2e818820732 346 SUPERFAMILY SSF56042 172 340 1.14E-61 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AVL55_03655 9ccb2a6b3c856c1140285a5f03ae4874 122 Gene3D G3DSA:3.90.1150.30 1 120 6.7E-11 T 11-10-2018 IPR038056 YjbR-like superfamily AVL55_03655 9ccb2a6b3c856c1140285a5f03ae4874 122 Pfam PF04237 YjbR 12 103 2.0E-11 T 11-10-2018 IPR007351 Uncharacterised protein YjbR AVL55_03655 9ccb2a6b3c856c1140285a5f03ae4874 122 SUPERFAMILY SSF142906 1 118 1.96E-28 T 11-10-2018 IPR038056 YjbR-like superfamily AVL55_13030 65bb5801806872a4a82b7fcb4eafed60 213 SUPERFAMILY SSF52317 10 212 3.28E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_13030 65bb5801806872a4a82b7fcb4eafed60 213 PIRSF PIRSF000495 10 213 1.3E-66 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AVL55_13030 65bb5801806872a4a82b7fcb4eafed60 213 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 12 212 6.5E-65 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AVL55_13030 65bb5801806872a4a82b7fcb4eafed60 213 Gene3D G3DSA:3.40.50.880 8 213 5.2E-68 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_13030 65bb5801806872a4a82b7fcb4eafed60 213 Pfam PF00117 Glutamine amidotransferase class-I 22 210 5.4E-22 T 11-10-2018 IPR017926 Glutamine amidotransferase AVL55_13030 65bb5801806872a4a82b7fcb4eafed60 213 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 11 213 33.098 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AVL55_05430 c42887c6a131f6990703adf7943a9d3d 217 SUPERFAMILY SSF52833 2 90 5.4E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_05430 c42887c6a131f6990703adf7943a9d3d 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 85 3.0E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_05430 c42887c6a131f6990703adf7943a9d3d 217 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 216 1.0E-86 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 AVL55_05430 c42887c6a131f6990703adf7943a9d3d 217 Gene3D G3DSA:3.40.30.10 5 84 5.2E-27 T 11-10-2018 AVL55_05430 c42887c6a131f6990703adf7943a9d3d 217 SUPERFAMILY SSF47616 88 215 5.15E-27 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_05430 c42887c6a131f6990703adf7943a9d3d 217 Gene3D G3DSA:1.20.1050.10 90 217 5.1E-50 T 11-10-2018 AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 SUPERFAMILY SSF53850 101 289 3.26E-37 T 11-10-2018 AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 Pfam PF03466 LysR substrate binding domain 99 292 1.0E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.5E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.5E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.5E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 Gene3D G3DSA:3.40.190.10 100 298 8.2E-53 T 11-10-2018 AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 Gene3D G3DSA:1.10.10.10 4 91 1.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 Gene3D G3DSA:3.40.190.10 168 269 8.2E-53 T 11-10-2018 AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 SUPERFAMILY SSF46785 7 117 3.33E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_05285 8fcbc04dcf952e107feb630e0139fc62 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.9E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_07975 e1c2d59637b00ebae1ce804c38cebd59 443 PIRSF PIRSF005353 1 443 5.7E-176 T 11-10-2018 IPR026033 Purine permease PbuG-like AVL55_07975 e1c2d59637b00ebae1ce804c38cebd59 443 Pfam PF00860 Permease family 21 399 3.9E-49 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AVL55_06790 2af4369ee400238f02a442676592ea91 283 SUPERFAMILY SSF117396 1 258 1.24E-65 T 11-10-2018 IPR036520 UPF0759 superfamily AVL55_06790 2af4369ee400238f02a442676592ea91 283 Gene3D G3DSA:3.20.20.410 1 273 4.3E-42 T 11-10-2018 IPR036520 UPF0759 superfamily AVL55_06790 2af4369ee400238f02a442676592ea91 283 Pfam PF01904 Protein of unknown function DUF72 17 257 7.5E-59 T 11-10-2018 IPR002763 Protein of unknown function DUF72 AVL55_01155 6a1bd8eeceb5433c4a1f21c8728a587d 234 Gene3D G3DSA:3.40.50.1820 2 231 1.1E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_01155 6a1bd8eeceb5433c4a1f21c8728a587d 234 Pfam PF12697 Alpha/beta hydrolase family 52 226 4.3E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_01155 6a1bd8eeceb5433c4a1f21c8728a587d 234 SUPERFAMILY SSF53474 6 230 9.78E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_18300 2bee96adee4e653d90d68954910b081d 688 Pfam PF01431 Peptidase family M13 484 685 3.0E-73 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_18300 2bee96adee4e653d90d68954910b081d 688 SUPERFAMILY SSF55486 41 688 1.12E-214 T 11-10-2018 AVL55_18300 2bee96adee4e653d90d68954910b081d 688 Pfam PF05649 Peptidase family M13 55 432 1.3E-101 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AVL55_18300 2bee96adee4e653d90d68954910b081d 688 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 476 488 1.9E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_18300 2bee96adee4e653d90d68954910b081d 688 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 515 531 1.9E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_18300 2bee96adee4e653d90d68954910b081d 688 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 586 597 1.9E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_18300 2bee96adee4e653d90d68954910b081d 688 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 494 506 1.9E-22 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AVL55_18300 2bee96adee4e653d90d68954910b081d 688 Gene3D G3DSA:1.10.1380.10 81 471 8.3E-244 T 11-10-2018 AVL55_18300 2bee96adee4e653d90d68954910b081d 688 Gene3D G3DSA:3.40.390.10 50 688 8.3E-244 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AVL55_13310 8a19d49d0719ca31a95d14f79294e6d8 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 64 2.9E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AVL55_13310 8a19d49d0719ca31a95d14f79294e6d8 80 Gene3D G3DSA:1.10.287.1040 3 79 4.3E-24 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 AVL55_13310 8a19d49d0719ca31a95d14f79294e6d8 80 SUPERFAMILY SSF116842 3 71 6.41E-21 T 11-10-2018 AVL55_13310 8a19d49d0719ca31a95d14f79294e6d8 80 Pfam PF02609 Exonuclease VII small subunit 10 61 2.9E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AVL55_13310 8a19d49d0719ca31a95d14f79294e6d8 80 PIRSF PIRSF006488 1 80 8.6E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AVL55_13310 8a19d49d0719ca31a95d14f79294e6d8 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 6 49 5.0E-10 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AVL55_13310 8a19d49d0719ca31a95d14f79294e6d8 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 15.649 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AVL55_03365 48521d3fcf77d47a0a06c8f0b3efb511 571 Pfam PF01368 DHH family 69 202 4.4E-8 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AVL55_03365 48521d3fcf77d47a0a06c8f0b3efb511 571 Gene3D G3DSA:3.10.310.30 324 452 3.3E-30 T 11-10-2018 AVL55_03365 48521d3fcf77d47a0a06c8f0b3efb511 571 Pfam PF02272 DHHA1 domain 317 444 8.8E-25 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AVL55_03365 48521d3fcf77d47a0a06c8f0b3efb511 571 Gene3D G3DSA:3.90.1640.30 43 321 5.7E-87 T 11-10-2018 AVL55_03365 48521d3fcf77d47a0a06c8f0b3efb511 571 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 18 567 7.2E-156 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AVL55_03365 48521d3fcf77d47a0a06c8f0b3efb511 571 SUPERFAMILY SSF64182 44 452 5.36E-114 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AVL55_17530 926c26ffd6cf1f5a836435192fc10100 166 Gene3D G3DSA:3.30.160.20 1 73 1.4E-32 T 11-10-2018 AVL55_17530 926c26ffd6cf1f5a836435192fc10100 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 35.131 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AVL55_17530 926c26ffd6cf1f5a836435192fc10100 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 74 2.2E-29 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AVL55_17530 926c26ffd6cf1f5a836435192fc10100 166 Gene3D G3DSA:3.30.230.10 74 166 9.6E-38 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_17530 926c26ffd6cf1f5a836435192fc10100 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.7E-69 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AVL55_17530 926c26ffd6cf1f5a836435192fc10100 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AVL55_17530 926c26ffd6cf1f5a836435192fc10100 166 SUPERFAMILY SSF54768 8 76 4.29E-24 T 11-10-2018 AVL55_17530 926c26ffd6cf1f5a836435192fc10100 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.2E-30 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AVL55_17530 926c26ffd6cf1f5a836435192fc10100 166 SUPERFAMILY SSF54211 79 158 1.77E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_03885 2ed1ddb7b603ba6fc6bef4c079df460f 298 SUPERFAMILY SSF103481 34 133 1.44E-5 T 11-10-2018 AVL55_03885 2ed1ddb7b603ba6fc6bef4c079df460f 298 SUPERFAMILY SSF103481 185 280 1.26E-12 T 11-10-2018 AVL55_03885 2ed1ddb7b603ba6fc6bef4c079df460f 298 Pfam PF00892 EamA-like transporter family 1 128 3.9E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_03885 2ed1ddb7b603ba6fc6bef4c079df460f 298 Pfam PF00892 EamA-like transporter family 148 279 8.0E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_03480 67ce4c30e1efbfb162b4197245a9df85 221 Pfam PF00072 Response regulator receiver domain 3 113 7.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_03480 67ce4c30e1efbfb162b4197245a9df85 221 SMART SM00862 145 216 5.8E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_03480 67ce4c30e1efbfb162b4197245a9df85 221 SMART SM00448 1 112 4.7E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_03480 67ce4c30e1efbfb162b4197245a9df85 221 SUPERFAMILY SSF52172 1 177 3.13E-38 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_03480 67ce4c30e1efbfb162b4197245a9df85 221 Gene3D G3DSA:1.10.10.10 122 220 1.0E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_03480 67ce4c30e1efbfb162b4197245a9df85 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 5.5E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_03480 67ce4c30e1efbfb162b4197245a9df85 221 Gene3D G3DSA:3.40.50.2300 1 121 6.5E-38 T 11-10-2018 AVL55_14830 1a2d281616cb4e6684925b014d929a67 311 SUPERFAMILY SSF46785 11 132 4.38E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_14830 1a2d281616cb4e6684925b014d929a67 311 Pfam PF12802 MarR family 38 94 1.7E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_14830 1a2d281616cb4e6684925b014d929a67 311 Pfam PF00583 Acetyltransferase (GNAT) family 194 288 3.3E-15 T 11-10-2018 IPR000182 GNAT domain AVL55_14830 1a2d281616cb4e6684925b014d929a67 311 Gene3D G3DSA:1.10.10.10 10 145 5.8E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_14830 1a2d281616cb4e6684925b014d929a67 311 Gene3D G3DSA:3.40.630.30 158 311 8.1E-29 T 11-10-2018 AVL55_14830 1a2d281616cb4e6684925b014d929a67 311 SUPERFAMILY SSF55729 160 298 8.58E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 SMART SM00052 404 645 2.1E-26 T 11-10-2018 IPR001633 EAL domain AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 SUPERFAMILY SSF55073 243 391 9.42E-18 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 Pfam PF00563 EAL domain 411 640 8.8E-44 T 11-10-2018 IPR001633 EAL domain AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 Gene3D G3DSA:3.20.20.450 402 641 7.8E-49 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 Gene3D G3DSA:3.30.1040.50 103 151 9.9E-12 T 11-10-2018 AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 389 1.4E-12 T 11-10-2018 IPR000160 GGDEF domain AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 389 4.3E-20 T 11-10-2018 IPR000160 GGDEF domain AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 Pfam PF16448 LapD/MoxY periplasmic domain 23 147 7.7E-40 T 11-10-2018 IPR032244 LapD/MoxY, periplasmic domain AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 SMART SM00267 227 396 1.1E-7 T 11-10-2018 IPR000160 GGDEF domain AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 SUPERFAMILY SSF141868 410 640 6.54E-47 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_08160 22aa43e2ac68da6ebb7583ffff947951 645 Gene3D G3DSA:3.30.70.270 221 394 1.4E-27 T 11-10-2018 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 SUPERFAMILY SSF51569 5 331 1.47E-143 T 11-10-2018 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 Gene3D G3DSA:3.20.20.70 1 334 2.8E-146 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 157 176 9.1E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 274 289 9.1E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 126 140 9.1E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 249 265 9.1E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 304 323 9.1E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 195 214 9.1E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 PIRSF PIRSF001415 1 333 3.4E-150 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 249 261 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 Pfam PF00490 Delta-aminolevulinic acid dehydratase 9 328 7.3E-141 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_02195 7634ea6ea04f90f0cc65e2a9766ad39b 336 SMART SM01004 6 330 1.4E-240 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AVL55_15290 028352d85c4b84fd8ebd5989dcf9c74c 256 Pfam PF07277 SapC 8 224 3.5E-66 T 11-10-2018 IPR010836 SapC AVL55_11770 5c5632c9c683f31d3e538d5ad3fadc53 393 Pfam PF00155 Aminotransferase class I and II 62 388 1.9E-44 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_11770 5c5632c9c683f31d3e538d5ad3fadc53 393 Gene3D G3DSA:3.40.640.10 76 296 1.2E-84 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_11770 5c5632c9c683f31d3e538d5ad3fadc53 393 SUPERFAMILY SSF53383 59 392 1.34E-71 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_11770 5c5632c9c683f31d3e538d5ad3fadc53 393 Gene3D G3DSA:3.90.1150.10 60 380 1.2E-84 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 SUPERFAMILY SSF48208 47 533 4.0E-139 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 ProSitePatterns PS00928 Trehalase signature 2. 450 459 - T 11-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 Gene3D G3DSA:1.50.10.10 38 544 1.6E-162 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 336 353 1.2E-39 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 379 395 1.2E-39 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 443 459 1.2E-39 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 520 533 1.2E-39 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 194 212 1.2E-39 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 270 287 1.2E-39 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 304 321 1.2E-39 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AVL55_16995 425ef29ba9fb9dfd3622c57182b042ad 544 Pfam PF01204 Trehalase 60 533 2.5E-128 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AVL55_19860 bb14454771bd43c8c0935d32e4e1a30f 101 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 27 75 6.0E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_19860 bb14454771bd43c8c0935d32e4e1a30f 101 SUPERFAMILY SSF47413 17 79 1.75E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_05740 56c6fcba296beb9a84a14869d47837a4 422 Gene3D G3DSA:3.90.220.20 232 363 6.2E-66 T 11-10-2018 AVL55_05740 56c6fcba296beb9a84a14869d47837a4 422 Gene3D G3DSA:3.90.220.20 22 414 6.2E-66 T 11-10-2018 AVL55_05740 56c6fcba296beb9a84a14869d47837a4 422 Pfam PF01420 Type I restriction modification DNA specificity domain 65 195 1.3E-5 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AVL55_05740 56c6fcba296beb9a84a14869d47837a4 422 Pfam PF01420 Type I restriction modification DNA specificity domain 228 397 5.7E-6 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AVL55_05740 56c6fcba296beb9a84a14869d47837a4 422 SUPERFAMILY SSF116734 212 415 3.76E-38 T 11-10-2018 AVL55_05740 56c6fcba296beb9a84a14869d47837a4 422 Gene3D G3DSA:1.10.287.1120 160 410 6.2E-66 T 11-10-2018 AVL55_05740 56c6fcba296beb9a84a14869d47837a4 422 SUPERFAMILY SSF116734 13 213 6.38E-35 T 11-10-2018 AVL55_16420 02fdbce0d5800b3ab7f84e068ef4988c 505 SUPERFAMILY SSF53720 14 496 1.44E-162 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_16420 02fdbce0d5800b3ab7f84e068ef4988c 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AVL55_16420 02fdbce0d5800b3ab7f84e068ef4988c 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AVL55_16420 02fdbce0d5800b3ab7f84e068ef4988c 505 Pfam PF00171 Aldehyde dehydrogenase family 27 492 5.3E-163 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AVL55_16420 02fdbce0d5800b3ab7f84e068ef4988c 505 Gene3D G3DSA:3.40.309.10 270 500 8.3E-71 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AVL55_16420 02fdbce0d5800b3ab7f84e068ef4988c 505 Gene3D G3DSA:3.40.605.10 13 269 2.4E-94 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_13205 9f17165fac6ec945b5fd72f78303f7da 271 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 247 270 4.3E-5 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain AVL55_13205 9f17165fac6ec945b5fd72f78303f7da 271 Pfam PF07589 PEP-CTERM motif 247 268 4.7E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 SUPERFAMILY SSF50249 7 84 7.71E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 Pfam PF00366 Ribosomal protein S17 11 77 1.8E-32 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 2.3E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 2.3E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 2.3E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 77 2.0E-30 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 3.4E-36 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 Gene3D G3DSA:2.40.50.140 2 84 6.7E-36 T 11-10-2018 AVL55_01635 f7a0966d3ae0f779dc97450ddc27397e 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 81 24.411 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_09680 c4ef6f0ea1c56989a5d7296fe0f3e302 340 Gene3D G3DSA:3.40.50.2300 169 335 1.1E-60 T 11-10-2018 AVL55_09680 c4ef6f0ea1c56989a5d7296fe0f3e302 340 SUPERFAMILY SSF47413 4 62 3.1E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_09680 c4ef6f0ea1c56989a5d7296fe0f3e302 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 49 6.9E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_09680 c4ef6f0ea1c56989a5d7296fe0f3e302 340 SUPERFAMILY SSF53822 61 323 5.26E-53 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_09680 c4ef6f0ea1c56989a5d7296fe0f3e302 340 Pfam PF13377 Periplasmic binding protein-like domain 179 337 7.0E-37 T 11-10-2018 AVL55_09680 c4ef6f0ea1c56989a5d7296fe0f3e302 340 SMART SM00354 4 77 1.3E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_09680 c4ef6f0ea1c56989a5d7296fe0f3e302 340 Gene3D G3DSA:1.10.260.40 1 62 4.9E-21 T 11-10-2018 AVL55_09680 c4ef6f0ea1c56989a5d7296fe0f3e302 340 Gene3D G3DSA:3.40.50.2300 81 329 1.1E-60 T 11-10-2018 AVL55_02740 9571b77bcf5cf1cd6497252197836709 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 296 3.8E-56 T 11-10-2018 IPR000160 GGDEF domain AVL55_02740 9571b77bcf5cf1cd6497252197836709 303 SUPERFAMILY SSF55785 3 109 7.04E-6 T 11-10-2018 IPR035965 PAS domain superfamily AVL55_02740 9571b77bcf5cf1cd6497252197836709 303 SMART SM00267 125 297 6.7E-64 T 11-10-2018 IPR000160 GGDEF domain AVL55_02740 9571b77bcf5cf1cd6497252197836709 303 Gene3D G3DSA:3.30.70.270 125 300 1.2E-59 T 11-10-2018 AVL55_02740 9571b77bcf5cf1cd6497252197836709 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 293 5.2E-49 T 11-10-2018 IPR000160 GGDEF domain AVL55_02740 9571b77bcf5cf1cd6497252197836709 303 SUPERFAMILY SSF55073 141 297 2.35E-52 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_02740 9571b77bcf5cf1cd6497252197836709 303 Gene3D G3DSA:3.30.450.20 1 120 6.3E-32 T 11-10-2018 AVL55_02200 8eb2683d95a1b6e8908832ba00f74af9 503 Pfam PF02541 Ppx/GppA phosphatase family 29 310 1.7E-77 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AVL55_02200 8eb2683d95a1b6e8908832ba00f74af9 503 Gene3D G3DSA:1.10.3210.10 312 503 8.7E-51 T 11-10-2018 AVL55_02200 8eb2683d95a1b6e8908832ba00f74af9 503 PIRSF PIRSF001267 6 503 4.4E-171 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AVL55_02200 8eb2683d95a1b6e8908832ba00f74af9 503 Gene3D G3DSA:3.30.420.40 17 305 4.5E-79 T 11-10-2018 AVL55_02200 8eb2683d95a1b6e8908832ba00f74af9 503 Gene3D G3DSA:3.30.420.150 120 297 4.5E-79 T 11-10-2018 AVL55_02200 8eb2683d95a1b6e8908832ba00f74af9 503 SUPERFAMILY SSF109604 315 500 3.86E-44 T 11-10-2018 AVL55_02200 8eb2683d95a1b6e8908832ba00f74af9 503 SUPERFAMILY SSF53067 140 310 2.23E-42 T 11-10-2018 AVL55_02200 8eb2683d95a1b6e8908832ba00f74af9 503 SUPERFAMILY SSF53067 15 134 6.68E-35 T 11-10-2018 AVL55_02200 8eb2683d95a1b6e8908832ba00f74af9 503 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 10 503 52.562 T 11-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AVL55_18900 ba82b1ebc9c110830a6f12ab14f767cb 328 SUPERFAMILY SSF51679 4 325 4.84E-82 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AVL55_18900 ba82b1ebc9c110830a6f12ab14f767cb 328 Pfam PF00296 Luciferase-like monooxygenase 23 302 4.6E-34 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AVL55_18900 ba82b1ebc9c110830a6f12ab14f767cb 328 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 325 1.0E-123 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AVL55_18900 ba82b1ebc9c110830a6f12ab14f767cb 328 Gene3D G3DSA:3.20.20.30 1 328 1.5E-90 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AVL55_18710 b9f76d03ffca7d3e8f19e6908fd665d7 629 Gene3D G3DSA:3.40.50.300 352 596 2.1E-40 T 11-10-2018 AVL55_18710 b9f76d03ffca7d3e8f19e6908fd665d7 629 SMART SM00382 403 571 9.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_18710 b9f76d03ffca7d3e8f19e6908fd665d7 629 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_18710 b9f76d03ffca7d3e8f19e6908fd665d7 629 SUPERFAMILY SSF90123 30 324 2.49E-24 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_18710 b9f76d03ffca7d3e8f19e6908fd665d7 629 Pfam PF00664 ABC transporter transmembrane region 35 289 2.4E-15 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AVL55_18710 b9f76d03ffca7d3e8f19e6908fd665d7 629 SUPERFAMILY SSF52540 392 567 1.78E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18710 b9f76d03ffca7d3e8f19e6908fd665d7 629 Pfam PF00005 ABC transporter 398 525 1.8E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_18710 b9f76d03ffca7d3e8f19e6908fd665d7 629 Gene3D G3DSA:1.20.1560.10 26 331 2.3E-15 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_15205 27c3b3c407b387ea97368c82a922e698 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 7.1E-127 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AVL55_15205 27c3b3c407b387ea97368c82a922e698 303 SUPERFAMILY SSF54211 3 126 9.1E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_15205 27c3b3c407b387ea97368c82a922e698 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 45.399 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AVL55_15205 27c3b3c407b387ea97368c82a922e698 303 Gene3D G3DSA:3.30.230.20 1 128 4.5E-52 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AVL55_15205 27c3b3c407b387ea97368c82a922e698 303 SUPERFAMILY SSF54211 134 278 7.51E-51 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_15205 27c3b3c407b387ea97368c82a922e698 303 Gene3D G3DSA:3.30.1700.10 129 303 2.6E-65 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AVL55_15205 27c3b3c407b387ea97368c82a922e698 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 6.0E-107 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 Gene3D G3DSA:2.60.40.1180 502 595 3.5E-6 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 SUPERFAMILY SSF51445 44 507 1.3E-87 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 Pfam PF00128 Alpha amylase, catalytic domain 94 446 2.1E-71 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 PRINTS PR00110 Alpha-amylase signature 385 397 6.3E-6 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 PRINTS PR00110 Alpha-amylase signature 284 295 6.3E-6 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 PRINTS PR00110 Alpha-amylase signature 164 175 6.3E-6 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 PRINTS PR00110 Alpha-amylase signature 320 338 6.3E-6 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 SUPERFAMILY SSF51011 513 595 1.18E-6 T 11-10-2018 AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 Gene3D G3DSA:3.20.20.80 40 500 2.7E-102 T 11-10-2018 AVL55_04110 62ea6218a9922fc93c9defe1d1c365ab 598 SMART SM00642 56 498 8.7E-81 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 510 43.349 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 SUPERFAMILY SSF50249 6 144 1.71E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 Pfam PF00152 tRNA synthetases class II (D, K and N) 151 507 2.4E-82 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 SUPERFAMILY SSF55681 151 508 3.25E-115 T 11-10-2018 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 Gene3D G3DSA:2.40.50.140 2 143 6.0E-30 T 11-10-2018 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 Pfam PF01336 OB-fold nucleic acid binding domain 63 135 1.4E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 251 268 2.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 246 2.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 2.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 188 198 2.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 392 408 2.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 510 8.2E-198 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AVL55_06250 7be34be2c0cb645eee15b1da2085f5e9 522 Gene3D G3DSA:3.30.930.10 147 522 1.0E-131 T 11-10-2018 AVL55_07060 4e8e8436c3de3134643665ecfc13c99e 240 Gene3D G3DSA:3.40.50.880 3 232 2.0E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_07060 4e8e8436c3de3134643665ecfc13c99e 240 Pfam PF03575 Peptidase family S51 6 209 5.8E-58 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AVL55_07060 4e8e8436c3de3134643665ecfc13c99e 240 SUPERFAMILY SSF52317 5 218 3.36E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_03575 ab4c64fd79bb742afe10af3e61fd400d 326 Pfam PF01380 SIS domain 43 174 2.4E-33 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AVL55_03575 ab4c64fd79bb742afe10af3e61fd400d 326 SUPERFAMILY SSF53697 8 321 1.25E-67 T 11-10-2018 AVL55_03575 ab4c64fd79bb742afe10af3e61fd400d 326 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 47 315 5.9E-110 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AVL55_03575 ab4c64fd79bb742afe10af3e61fd400d 326 PIRSF PIRSF004692 1 326 4.1E-131 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AVL55_03575 ab4c64fd79bb742afe10af3e61fd400d 326 Pfam PF00571 CBS domain 270 322 0.0034 T 11-10-2018 IPR000644 CBS domain AVL55_03575 ab4c64fd79bb742afe10af3e61fd400d 326 Pfam PF00571 CBS domain 203 259 0.0014 T 11-10-2018 IPR000644 CBS domain AVL55_03575 ab4c64fd79bb742afe10af3e61fd400d 326 Gene3D G3DSA:3.10.580.10 199 323 2.8E-41 T 11-10-2018 AVL55_03575 ab4c64fd79bb742afe10af3e61fd400d 326 Gene3D G3DSA:3.40.50.10490 4 198 2.3E-66 T 11-10-2018 AVL55_07605 6d0f0b89d704b1942d7d6c8f61b871be 210 Gene3D G3DSA:2.40.240.10 3 98 8.1E-34 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_07605 6d0f0b89d704b1942d7d6c8f61b871be 210 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 6 98 25.016 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AVL55_07605 6d0f0b89d704b1942d7d6c8f61b871be 210 Pfam PF01386 Ribosomal L25p family 8 95 2.3E-26 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AVL55_07605 6d0f0b89d704b1942d7d6c8f61b871be 210 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 192 1.4E-30 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain AVL55_07605 6d0f0b89d704b1942d7d6c8f61b871be 210 Gene3D G3DSA:2.170.120.20 101 201 1.6E-27 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal AVL55_07605 6d0f0b89d704b1942d7d6c8f61b871be 210 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 10 98 5.0E-33 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AVL55_07605 6d0f0b89d704b1942d7d6c8f61b871be 210 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 191 31.097 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AVL55_07605 6d0f0b89d704b1942d7d6c8f61b871be 210 SUPERFAMILY SSF50715 6 200 9.77E-56 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_07605 6d0f0b89d704b1942d7d6c8f61b871be 210 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 176 9.7E-47 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AVL55_12975 c38fa39cdc9dff7467e27546d2168f5f 434 SUPERFAMILY SSF51011 367 433 4.49E-9 T 11-10-2018 AVL55_12975 c38fa39cdc9dff7467e27546d2168f5f 434 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 366 417 1.4E-4 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AVL55_12975 c38fa39cdc9dff7467e27546d2168f5f 434 SMART SM00642 26 343 2.8E-19 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_12975 c38fa39cdc9dff7467e27546d2168f5f 434 Gene3D G3DSA:2.60.40.1180 362 433 5.1E-8 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_12975 c38fa39cdc9dff7467e27546d2168f5f 434 Pfam PF00128 Alpha amylase, catalytic domain 36 314 2.1E-31 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_12975 c38fa39cdc9dff7467e27546d2168f5f 434 SUPERFAMILY SSF51445 14 351 5.29E-83 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_12975 c38fa39cdc9dff7467e27546d2168f5f 434 Gene3D G3DSA:3.20.20.80 13 349 9.9E-103 T 11-10-2018 AVL55_03775 df206d4c9d953aa310e4225edb351179 311 Gene3D G3DSA:3.40.91.100 192 309 2.4E-9 T 11-10-2018 AVL55_03775 df206d4c9d953aa310e4225edb351179 311 Pfam PF04471 Restriction endonuclease 165 286 7.0E-34 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AVL55_03775 df206d4c9d953aa310e4225edb351179 311 Pfam PF14338 Mrr N-terminal domain 5 92 3.4E-31 T 11-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain AVL55_03775 df206d4c9d953aa310e4225edb351179 311 SUPERFAMILY SSF52980 169 290 1.55E-15 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 Pfam PF17137 Domain of unknown function (DUF5110) 691 764 1.1E-12 T 11-10-2018 IPR033403 Domain of unknown function DUF5110 AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 Gene3D G3DSA:2.60.40.1760 25 235 6.5E-46 T 11-10-2018 AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 SUPERFAMILY SSF51011 591 669 9.71E-17 T 11-10-2018 AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 Gene3D G3DSA:3.20.20.80 241 620 5.5E-139 T 11-10-2018 AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 Pfam PF01055 Glycosyl hydrolases family 31 236 672 2.1E-113 T 11-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 Pfam PF13802 Galactose mutarotase-like 151 214 4.5E-11 T 11-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 SUPERFAMILY SSF51445 244 589 1.31E-70 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 Gene3D G3DSA:2.60.40.1180 671 807 1.7E-28 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 Gene3D G3DSA:2.60.40.1180 621 670 3.8E-15 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AVL55_19310 68f5c244dfdd15f7ab5f103185ef55ce 807 SUPERFAMILY SSF74650 19 240 3.45E-34 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AVL55_16190 9217894621a8d09921197330cce3f837 967 Gene3D G3DSA:1.20.58.910 705 791 1.1E-31 T 11-10-2018 AVL55_16190 9217894621a8d09921197330cce3f837 967 SMART SM00487 234 451 4.3E-20 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_16190 9217894621a8d09921197330cce3f837 967 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 704 1.2E-153 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AVL55_16190 9217894621a8d09921197330cce3f837 967 Gene3D G3DSA:3.40.50.300 449 704 4.1E-91 T 11-10-2018 AVL55_16190 9217894621a8d09921197330cce3f837 967 Gene3D G3DSA:3.40.50.300 237 448 2.9E-62 T 11-10-2018 AVL55_16190 9217894621a8d09921197330cce3f837 967 Gene3D G3DSA:3.90.640.50 29 95 3.5E-81 T 11-10-2018 AVL55_16190 9217894621a8d09921197330cce3f837 967 Gene3D G3DSA:3.90.1570.50 3 229 3.5E-81 T 11-10-2018 AVL55_16190 9217894621a8d09921197330cce3f837 967 Pfam PF04851 Type III restriction enzyme, res subunit 236 422 2.2E-36 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AVL55_16190 9217894621a8d09921197330cce3f837 967 SUPERFAMILY SSF52540 268 678 1.17E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16190 9217894621a8d09921197330cce3f837 967 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 185 1.7E-36 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AVL55_16190 9217894621a8d09921197330cce3f837 967 SUPERFAMILY SSF52540 237 423 1.38E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16190 9217894621a8d09921197330cce3f837 967 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 707 963 1.3E-58 T 11-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal AVL55_10260 ea21b8738f6c7a1d8051475cfdf9be50 82 Pfam PF01381 Helix-turn-helix 8 60 1.4E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_10260 ea21b8738f6c7a1d8051475cfdf9be50 82 Gene3D G3DSA:1.10.260.40 2 81 2.4E-10 T 11-10-2018 AVL55_10260 ea21b8738f6c7a1d8051475cfdf9be50 82 SUPERFAMILY SSF47413 1 62 2.82E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_10260 ea21b8738f6c7a1d8051475cfdf9be50 82 SMART SM00530 7 62 0.0051 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_14435 dfb282ca7adebb946c778b4e0eaea026 192 SUPERFAMILY SSF52540 1 141 1.87E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14435 dfb282ca7adebb946c778b4e0eaea026 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.3 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AVL55_14435 dfb282ca7adebb946c778b4e0eaea026 192 Gene3D G3DSA:3.40.50.300 1 141 3.1E-25 T 11-10-2018 AVL55_14435 dfb282ca7adebb946c778b4e0eaea026 192 PIRSF PIRSF035805 1 190 1.2E-56 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AVL55_14435 dfb282ca7adebb946c778b4e0eaea026 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AVL55_14435 dfb282ca7adebb946c778b4e0eaea026 192 Gene3D G3DSA:3.30.60.20 144 189 2.6E-11 T 11-10-2018 AVL55_14435 dfb282ca7adebb946c778b4e0eaea026 192 Pfam PF00265 Thymidine kinase 2 186 1.6E-57 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AVL55_14435 dfb282ca7adebb946c778b4e0eaea026 192 SUPERFAMILY SSF57716 142 191 2.61E-17 T 11-10-2018 AVL55_12445 ea19e049b8ee8cc014b8cbdf69961026 263 Gene3D G3DSA:3.60.15.10 6 263 5.5E-89 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_12445 ea19e049b8ee8cc014b8cbdf69961026 263 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 10 263 43.999 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AVL55_12445 ea19e049b8ee8cc014b8cbdf69961026 263 PIRSF PIRSF005457 6 263 7.2E-97 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AVL55_12445 ea19e049b8ee8cc014b8cbdf69961026 263 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 12 263 1.5E-103 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AVL55_12445 ea19e049b8ee8cc014b8cbdf69961026 263 SUPERFAMILY SSF56281 12 263 7.86E-67 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_12445 ea19e049b8ee8cc014b8cbdf69961026 263 Pfam PF00753 Metallo-beta-lactamase superfamily 22 175 5.1E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_12445 ea19e049b8ee8cc014b8cbdf69961026 263 SMART SM00849 20 175 5.4E-29 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_12445 ea19e049b8ee8cc014b8cbdf69961026 263 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 176 263 1.8E-27 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AVL55_07660 d854c072488e63fdcd0d1cf19ca7183b 123 PIRSF PIRSF005610 1 119 3.3E-24 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AVL55_07660 d854c072488e63fdcd0d1cf19ca7183b 123 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 121 3.3E-40 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AVL55_09130 85f0499c51589fd47d12596b5e65a5da 240 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 100 223 1.2E-33 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AVL55_09130 85f0499c51589fd47d12596b5e65a5da 240 SUPERFAMILY SSF55729 73 232 6.38E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_09130 85f0499c51589fd47d12596b5e65a5da 240 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 10 79 4.6E-18 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AVL55_09130 85f0499c51589fd47d12596b5e65a5da 240 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 1 230 34.401 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AVL55_09130 85f0499c51589fd47d12596b5e65a5da 240 PIRSF PIRSF037208 1 239 7.6E-83 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AVL55_05080 ce4a277e0d20faf5e74749352ff650f1 194 Gene3D G3DSA:2.160.10.10 3 152 4.0E-48 T 11-10-2018 AVL55_05080 ce4a277e0d20faf5e74749352ff650f1 194 SUPERFAMILY SSF51161 4 165 2.36E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_05080 ce4a277e0d20faf5e74749352ff650f1 194 Gene3D G3DSA:2.20.70.110 154 190 1.0E-12 T 11-10-2018 AVL55_05080 ce4a277e0d20faf5e74749352ff650f1 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 52 76 7.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_05080 ce4a277e0d20faf5e74749352ff650f1 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 135 1.0E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_05080 ce4a277e0d20faf5e74749352ff650f1 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 50 3.2E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_00225 0ff42e33c3680cf7a65d8879fa2b7ef8 111 Pfam PF08850 Domain of unknown function (DUF1820) 7 103 2.1E-40 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 AVL55_00225 0ff42e33c3680cf7a65d8879fa2b7ef8 111 PIRSF PIRSF028538 1 110 1.7E-41 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 AVL55_08915 1f4e73f2fd1e501b2fc552c45e1f7381 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 2.1E-5 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_08915 1f4e73f2fd1e501b2fc552c45e1f7381 187 SUPERFAMILY SSF52833 1 186 3.64E-55 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_08915 1f4e73f2fd1e501b2fc552c45e1f7381 187 PIRSF PIRSF000239 1 187 9.9E-52 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_08915 1f4e73f2fd1e501b2fc552c45e1f7381 187 Pfam PF00578 AhpC/TSA family 9 133 6.0E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_08915 1f4e73f2fd1e501b2fc552c45e1f7381 187 Gene3D G3DSA:3.40.30.10 1 186 1.2E-61 T 11-10-2018 AVL55_08915 1f4e73f2fd1e501b2fc552c45e1f7381 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 6.9E-103 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AVL55_15280 1f4b0386b882a47ac066a0374549ee2e 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 147 1.0E-65 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AVL55_15280 1f4b0386b882a47ac066a0374549ee2e 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 55.71 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AVL55_15280 1f4b0386b882a47ac066a0374549ee2e 152 SUPERFAMILY SSF89447 1 135 5.02E-44 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily AVL55_15280 1f4b0386b882a47ac066a0374549ee2e 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 4.1E-55 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AVL55_15280 1f4b0386b882a47ac066a0374549ee2e 152 Gene3D G3DSA:2.40.330.20 1 148 7.6E-42 T 11-10-2018 IPR038619 MraZ superfamily AVL55_15280 1f4b0386b882a47ac066a0374549ee2e 152 Pfam PF02381 MraZ protein, putative antitoxin-like 78 134 5.9E-17 T 11-10-2018 IPR020603 MraZ domain AVL55_15280 1f4b0386b882a47ac066a0374549ee2e 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 1.7E-21 T 11-10-2018 IPR020603 MraZ domain AVL55_14290 029ecbbad79872b19cab2d055deba392 115 Gene3D G3DSA:3.30.70.270 11 115 2.5E-25 T 11-10-2018 AVL55_14290 029ecbbad79872b19cab2d055deba392 115 SUPERFAMILY SSF55073 12 112 1.88E-23 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_14290 029ecbbad79872b19cab2d055deba392 115 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 12 109 6.5E-24 T 11-10-2018 IPR000160 GGDEF domain AVL55_14290 029ecbbad79872b19cab2d055deba392 115 Pfam PF00990 Diguanylate cyclase, GGDEF domain 12 106 1.8E-19 T 11-10-2018 IPR000160 GGDEF domain AVL55_14290 029ecbbad79872b19cab2d055deba392 115 SMART SM00267 4 110 2.7E-5 T 11-10-2018 IPR000160 GGDEF domain AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 Gene3D G3DSA:3.60.40.10 168 380 2.4E-29 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 SUPERFAMILY SSF55874 429 541 6.55E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 189 379 4.0E-31 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 Pfam PF00072 Response regulator receiver domain 3 115 1.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 Gene3D G3DSA:3.40.50.12740 1 167 4.9E-42 T 11-10-2018 AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 SMART SM00331 164 381 2.1E-8 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 Gene3D G3DSA:3.30.565.10 400 553 8.9E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 SMART SM00448 1 115 8.1E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 SUPERFAMILY SSF81606 173 378 1.7E-6 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_06750 c6c8ac442b2dfa3073fee0a2aa6af02d 561 SUPERFAMILY SSF52172 2 142 7.97E-39 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_17565 4616bdef8df151b103f6b2a605059bba 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.011 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AVL55_17565 4616bdef8df151b103f6b2a605059bba 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.4E-54 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AVL55_17565 4616bdef8df151b103f6b2a605059bba 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.8E-59 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AVL55_17565 4616bdef8df151b103f6b2a605059bba 122 Gene3D G3DSA:2.40.150.20 1 122 1.6E-53 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_17565 4616bdef8df151b103f6b2a605059bba 122 SUPERFAMILY SSF50193 1 122 5.36E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_17565 4616bdef8df151b103f6b2a605059bba 122 SMART SM01374 1 122 8.4E-85 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AVL55_09495 f70dcac71ff3d401a4c44dc2e287e50f 864 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 355 490 5.4E-18 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AVL55_09495 f70dcac71ff3d401a4c44dc2e287e50f 864 Pfam PF03772 Competence protein 256 563 7.2E-37 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AVL55_09495 f70dcac71ff3d401a4c44dc2e287e50f 864 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 353 824 2.3E-66 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AVL55_09495 f70dcac71ff3d401a4c44dc2e287e50f 864 SUPERFAMILY SSF56281 594 841 1.4E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_09495 f70dcac71ff3d401a4c44dc2e287e50f 864 Pfam PF00753 Metallo-beta-lactamase superfamily 601 773 5.7E-8 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_09495 f70dcac71ff3d401a4c44dc2e287e50f 864 Gene3D G3DSA:3.60.15.10 594 843 9.4E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_09495 f70dcac71ff3d401a4c44dc2e287e50f 864 SMART SM00849 603 773 3.2E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_00790 a797db325f0c56073cdcd8762fff207a 445 Gene3D G3DSA:3.10.580.10 130 255 1.6E-34 T 11-10-2018 AVL55_00790 a797db325f0c56073cdcd8762fff207a 445 Pfam PF03448 MgtE intracellular N domain 34 132 2.8E-18 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AVL55_00790 a797db325f0c56073cdcd8762fff207a 445 SUPERFAMILY SSF158791 19 131 8.63E-17 T 11-10-2018 AVL55_00790 a797db325f0c56073cdcd8762fff207a 445 SUPERFAMILY SSF161093 273 444 3.79E-49 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AVL55_00790 a797db325f0c56073cdcd8762fff207a 445 SMART SM00924 31 134 2.1E-19 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AVL55_00790 a797db325f0c56073cdcd8762fff207a 445 SUPERFAMILY SSF54631 134 270 3.66E-12 T 11-10-2018 AVL55_00790 a797db325f0c56073cdcd8762fff207a 445 Gene3D G3DSA:1.10.357.20 271 444 2.9E-48 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AVL55_00790 a797db325f0c56073cdcd8762fff207a 445 Gene3D G3DSA:1.25.60.10 7 129 1.0E-7 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily AVL55_00790 a797db325f0c56073cdcd8762fff207a 445 Pfam PF01769 Divalent cation transporter 316 437 1.1E-25 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AVL55_03590 357b43cf30642e23dce76bab5a16a39c 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 256 2.8E-94 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AVL55_03590 357b43cf30642e23dce76bab5a16a39c 258 Pfam PF02405 Permease MlaE 41 253 3.4E-75 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 AVL55_15370 e86df271d5778577d22dbed8839c33b2 265 Pfam PF01435 Peptidase family M48 68 246 3.6E-39 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AVL55_15370 e86df271d5778577d22dbed8839c33b2 265 Gene3D G3DSA:3.30.2010.10 53 144 2.5E-6 T 11-10-2018 AVL55_08695 9b48229e1603984d22dd6582c39ccb53 283 Gene3D G3DSA:3.30.470.10 5 117 7.4E-21 T 11-10-2018 AVL55_08695 9b48229e1603984d22dd6582c39ccb53 283 SUPERFAMILY SSF56752 10 253 1.14E-53 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AVL55_08695 9b48229e1603984d22dd6582c39ccb53 283 Pfam PF01063 Amino-transferase class IV 22 253 2.4E-43 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AVL55_08695 9b48229e1603984d22dd6582c39ccb53 283 Gene3D G3DSA:3.20.10.10 128 265 2.6E-42 T 11-10-2018 AVL55_08695 9b48229e1603984d22dd6582c39ccb53 283 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 8 259 9.9E-76 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AVL55_15950 335b314df3773ec9d9facfd39e8a65ad 411 Pfam PF11449 Putative, 10TM heavy-metal exporter 56 410 2.4E-121 T 11-10-2018 IPR021552 Putative, 10TM heavy-metal exporter AVL55_08700 3db0465ef952e697cca8db6694f17b5d 339 Pfam PF02618 YceG-like family 42 334 1.4E-78 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AVL55_08700 3db0465ef952e697cca8db6694f17b5d 339 Gene3D G3DSA:3.30.160.60 309 339 6.5E-13 T 11-10-2018 AVL55_08700 3db0465ef952e697cca8db6694f17b5d 339 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 339 31.935 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AVL55_08700 3db0465ef952e697cca8db6694f17b5d 339 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 335 9.6E-85 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AVL55_06830 eb0c7361ec981c2cee771d2237501f86 139 Gene3D G3DSA:3.30.420.270 56 128 1.5E-26 T 11-10-2018 AVL55_06830 eb0c7361ec981c2cee771d2237501f86 139 TIGRFAM TIGR02801 tolR: protein TolR 10 136 1.0E-45 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AVL55_06830 eb0c7361ec981c2cee771d2237501f86 139 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 3 136 31.157 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AVL55_06830 eb0c7361ec981c2cee771d2237501f86 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 137 2.3E-28 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AVL55_10110 d8c7dbd710f68f37822af2fffb629b82 348 Gene3D G3DSA:2.130.10.10 23 291 1.9E-10 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_10110 d8c7dbd710f68f37822af2fffb629b82 348 SUPERFAMILY SSF50939 42 284 7.26E-30 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AVL55_10110 d8c7dbd710f68f37822af2fffb629b82 348 Pfam PF14870 Photosynthesis system II assembly factor YCF48 112 253 2.8E-7 T 11-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain AVL55_19375 52241f370c9465c19702516a0aa810bd 399 Gene3D G3DSA:3.30.420.380 2 235 4.3E-80 T 11-10-2018 AVL55_19375 52241f370c9465c19702516a0aa810bd 399 SUPERFAMILY SSF53067 1 143 1.28E-38 T 11-10-2018 AVL55_19375 52241f370c9465c19702516a0aa810bd 399 PIRSF PIRSF015761 17 399 3.2E-29 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AVL55_19375 52241f370c9465c19702516a0aa810bd 399 Pfam PF05134 Type II secretion system (T2SS), protein L 4 237 5.7E-57 T 11-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AVL55_19375 52241f370c9465c19702516a0aa810bd 399 Gene3D G3DSA:3.30.420.370 141 213 4.3E-80 T 11-10-2018 AVL55_19375 52241f370c9465c19702516a0aa810bd 399 Gene3D G3DSA:3.30.1360.100 313 399 2.6E-24 T 11-10-2018 AVL55_19375 52241f370c9465c19702516a0aa810bd 399 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 4 397 1.1E-76 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AVL55_19375 52241f370c9465c19702516a0aa810bd 399 Pfam PF12693 GspL periplasmic domain 246 397 4.5E-28 T 11-10-2018 IPR025691 GspL periplasmic domain AVL55_19375 52241f370c9465c19702516a0aa810bd 399 SUPERFAMILY SSF53067 145 236 2.2E-19 T 11-10-2018 AVL55_06850 99638c74db16c9afff7ad883e9751b0d 254 Pfam PF13174 Tetratricopeptide repeat 209 241 8.7E-8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_06850 99638c74db16c9afff7ad883e9751b0d 254 Pfam PF16331 TolA binding protein trimerisation 29 101 1.9E-22 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AVL55_06850 99638c74db16c9afff7ad883e9751b0d 254 SUPERFAMILY SSF48452 134 243 2.42E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_06850 99638c74db16c9afff7ad883e9751b0d 254 Gene3D G3DSA:1.25.40.10 134 254 5.2E-30 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_06850 99638c74db16c9afff7ad883e9751b0d 254 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 251 1.3E-41 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal AVL55_06850 99638c74db16c9afff7ad883e9751b0d 254 Gene3D G3DSA:1.20.5.110 26 101 5.1E-20 T 11-10-2018 AVL55_06850 99638c74db16c9afff7ad883e9751b0d 254 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 254 19.324 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AVL55_06850 99638c74db16c9afff7ad883e9751b0d 254 Pfam PF13432 Tetratricopeptide repeat 145 194 3.0E-6 T 11-10-2018 AVL55_15090 6a5abb2b7597c02325301f7772bffc41 96 Pfam PF06945 Protein of unknown function (DUF1289) 18 64 4.9E-16 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 AVL55_04740 babf545a7e7c7daa22ebb1a62711c56a 149 SUPERFAMILY SSF54637 8 146 7.65E-48 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_04740 babf545a7e7c7daa22ebb1a62711c56a 149 Pfam PF07977 FabA-like domain 17 139 9.3E-35 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_04740 babf545a7e7c7daa22ebb1a62711c56a 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 147 35.609 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_04740 babf545a7e7c7daa22ebb1a62711c56a 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 145 2.1E-59 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_04740 babf545a7e7c7daa22ebb1a62711c56a 149 Gene3D G3DSA:3.10.129.10 3 148 3.2E-59 T 11-10-2018 AVL55_00295 4eb027ff112e53dd649a9b48a6b2baa2 243 Gene3D G3DSA:1.10.510.10 149 243 2.2E-15 T 11-10-2018 AVL55_00295 4eb027ff112e53dd649a9b48a6b2baa2 243 SUPERFAMILY SSF56112 50 195 2.83E-16 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_00295 4eb027ff112e53dd649a9b48a6b2baa2 243 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 4 240 32.51 T 11-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 AVL55_00295 4eb027ff112e53dd649a9b48a6b2baa2 243 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 35 238 9.1E-49 T 11-10-2018 AVL55_04380 5cbc82cdd5a0c8d1ad6bebaa206d2484 344 SMART SM00320 294 336 85.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_04380 5cbc82cdd5a0c8d1ad6bebaa206d2484 344 SMART SM00320 168 206 12.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_04380 5cbc82cdd5a0c8d1ad6bebaa206d2484 344 SMART SM00320 37 76 3.1 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_04380 5cbc82cdd5a0c8d1ad6bebaa206d2484 344 SUPERFAMILY SSF50998 45 338 1.18E-24 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AVL55_04380 5cbc82cdd5a0c8d1ad6bebaa206d2484 344 Gene3D G3DSA:2.130.10.10 31 242 6.0E-14 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_04380 5cbc82cdd5a0c8d1ad6bebaa206d2484 344 Gene3D G3DSA:2.130.10.10 243 342 1.0E-5 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_04495 497acda87c0b92b2ad273eee2aca4edd 164 Pfam PF03100 CcmE 4 135 2.5E-44 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AVL55_04495 497acda87c0b92b2ad273eee2aca4edd 164 SUPERFAMILY SSF82093 30 141 4.45E-39 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 AVL55_04495 497acda87c0b92b2ad273eee2aca4edd 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 31.117 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AVL55_04495 497acda87c0b92b2ad273eee2aca4edd 164 Gene3D G3DSA:2.40.50.140 30 141 9.7E-40 T 11-10-2018 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 Gene3D G3DSA:3.90.230.10 2 261 1.3E-116 T 11-10-2018 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 42.335 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 251 1.8E-99 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 2.0E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 2.0E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 2.0E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 2.0E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 Pfam PF00557 Metallopeptidase family M24 12 243 5.7E-57 T 11-10-2018 IPR000994 Peptidase M24 AVL55_04685 69d75d252e0250e6911ad5542b1d7624 264 SUPERFAMILY SSF55920 4 255 3.53E-94 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AVL55_09020 d13560636e17bb49be4f1ee8c3d4659b 158 SMART SM00347 24 124 2.6E-21 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_09020 d13560636e17bb49be4f1ee8c3d4659b 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.4E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_09020 d13560636e17bb49be4f1ee8c3d4659b 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.4E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_09020 d13560636e17bb49be4f1ee8c3d4659b 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.4E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_09020 d13560636e17bb49be4f1ee8c3d4659b 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.4E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_09020 d13560636e17bb49be4f1ee8c3d4659b 158 Pfam PF01047 MarR family 31 89 4.1E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AVL55_09020 d13560636e17bb49be4f1ee8c3d4659b 158 Gene3D G3DSA:1.10.10.10 1 142 1.7E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_09020 d13560636e17bb49be4f1ee8c3d4659b 158 SUPERFAMILY SSF46785 4 141 4.1E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_17845 cd6b7dcad918760e3de502837557d4dc 196 Gene3D G3DSA:3.30.70.1070 112 193 7.8E-29 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AVL55_17845 cd6b7dcad918760e3de502837557d4dc 196 SUPERFAMILY SSF110997 116 195 2.48E-21 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AVL55_17845 cd6b7dcad918760e3de502837557d4dc 196 Pfam PF05036 Sporulation related domain 118 183 1.6E-16 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AVL55_11250 0dd3aaf6d4308c530c95eb48ad89e37b 154 Gene3D G3DSA:3.40.30.10 1 154 2.6E-48 T 11-10-2018 AVL55_11250 0dd3aaf6d4308c530c95eb48ad89e37b 154 Pfam PF00578 AhpC/TSA family 7 134 2.8E-39 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_11250 0dd3aaf6d4308c530c95eb48ad89e37b 154 SUPERFAMILY SSF52833 4 153 2.83E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_11250 0dd3aaf6d4308c530c95eb48ad89e37b 154 PIRSF PIRSF000239 1 142 2.9E-18 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_08555 d556af26005b858ec1d31dd2ac5403b8 236 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_08555 d556af26005b858ec1d31dd2ac5403b8 236 Pfam PF00005 ABC transporter 24 172 4.2E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_08555 d556af26005b858ec1d31dd2ac5403b8 236 SMART SM00382 33 221 3.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_08555 d556af26005b858ec1d31dd2ac5403b8 236 SUPERFAMILY SSF52540 5 227 2.21E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08555 d556af26005b858ec1d31dd2ac5403b8 236 Gene3D G3DSA:3.40.50.300 2 235 5.9E-71 T 11-10-2018 AVL55_08555 d556af26005b858ec1d31dd2ac5403b8 236 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.1E-99 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 AVL55_06195 e888c76ed295bcb37a7e7dc2d47bbc07 404 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 33 391 5.7E-24 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AVL55_06195 e888c76ed295bcb37a7e7dc2d47bbc07 404 SUPERFAMILY SSF56219 30 398 8.38E-22 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_06195 e888c76ed295bcb37a7e7dc2d47bbc07 404 Gene3D G3DSA:3.60.10.10 28 403 1.2E-20 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_18945 86471217b34fea6a9aef23a8a20f0d63 183 SUPERFAMILY SSF88723 5 144 7.85E-11 T 11-10-2018 IPR029060 PIN-like domain superfamily AVL55_18570 df37d235394a49e537898a4010e21123 154 Gene3D G3DSA:3.40.1550.10 1 154 2.9E-45 T 11-10-2018 IPR028976 CheC-like superfamily AVL55_18570 df37d235394a49e537898a4010e21123 154 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 2.3E-24 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain AVL55_18570 df37d235394a49e537898a4010e21123 154 SUPERFAMILY SSF103039 1 152 5.62E-34 T 11-10-2018 IPR028976 CheC-like superfamily AVL55_10785 72faab1d1147f3e8a2d0eae721b06ffe 317 Gene3D G3DSA:3.40.50.620 8 279 2.7E-50 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_10785 72faab1d1147f3e8a2d0eae721b06ffe 317 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 19 280 57.69 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 AVL55_10785 72faab1d1147f3e8a2d0eae721b06ffe 317 Pfam PF01171 PP-loop family 50 213 1.7E-15 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AVL55_10785 72faab1d1147f3e8a2d0eae721b06ffe 317 SUPERFAMILY SSF52402 26 244 1.9E-55 T 11-10-2018 AVL55_10785 72faab1d1147f3e8a2d0eae721b06ffe 317 PIRSF PIRSF004976 6 281 6.1E-76 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AVL55_16100 17d985415bd185a7c63d6d026ada6ba6 177 Pfam PF08281 Sigma-70, region 4 120 171 3.2E-9 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_16100 17d985415bd185a7c63d6d026ada6ba6 177 Gene3D G3DSA:1.10.1740.10 8 88 5.0E-27 T 11-10-2018 AVL55_16100 17d985415bd185a7c63d6d026ada6ba6 177 Pfam PF04542 Sigma-70 region 2 24 90 2.2E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_16100 17d985415bd185a7c63d6d026ada6ba6 177 SUPERFAMILY SSF88659 118 175 4.86E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_16100 17d985415bd185a7c63d6d026ada6ba6 177 SUPERFAMILY SSF88946 2 102 4.45E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_16100 17d985415bd185a7c63d6d026ada6ba6 177 Gene3D G3DSA:1.10.10.10 89 177 7.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16100 17d985415bd185a7c63d6d026ada6ba6 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 175 8.0E-24 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.91 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 4.5E-42 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.6E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-17 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 Gene3D G3DSA:2.40.50.100 21 85 3.4E-30 T 11-10-2018 AVL55_02555 d06e9bfab7dc88e1604623c978d9b335 85 SUPERFAMILY SSF110324 2 82 2.02E-33 T 11-10-2018 AVL55_07045 d2cc0b15bb744f6b69e2057eeaf8e233 453 Gene3D G3DSA:3.90.1150.10 34 417 1.3E-120 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_07045 d2cc0b15bb744f6b69e2057eeaf8e233 453 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 260 269 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AVL55_07045 d2cc0b15bb744f6b69e2057eeaf8e233 453 SUPERFAMILY SSF53383 2 422 2.37E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_07045 d2cc0b15bb744f6b69e2057eeaf8e233 453 Pfam PF00155 Aminotransferase class I and II 39 420 6.2E-53 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_07045 d2cc0b15bb744f6b69e2057eeaf8e233 453 Gene3D G3DSA:3.40.640.10 50 313 1.3E-120 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_18705 04343ec9d427032f8c5ba7e4cf331c0b 529 SMART SM00382 339 517 4.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_18705 04343ec9d427032f8c5ba7e4cf331c0b 529 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_18705 04343ec9d427032f8c5ba7e4cf331c0b 529 SUPERFAMILY SSF52540 330 506 5.99E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18705 04343ec9d427032f8c5ba7e4cf331c0b 529 Pfam PF00005 ABC transporter 333 468 8.4E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_18705 04343ec9d427032f8c5ba7e4cf331c0b 529 Gene3D G3DSA:3.40.50.300 309 524 8.4E-38 T 11-10-2018 AVL55_00230 47b873387938bb771778dcf992260aa0 545 Gene3D G3DSA:3.50.30.30 111 221 3.5E-5 T 11-10-2018 AVL55_00230 47b873387938bb771778dcf992260aa0 545 SUPERFAMILY SSF52025 122 249 6.28E-13 T 11-10-2018 AVL55_00230 47b873387938bb771778dcf992260aa0 545 Gene3D G3DSA:3.40.630.10 244 534 2.6E-52 T 11-10-2018 AVL55_00230 47b873387938bb771778dcf992260aa0 545 Gene3D G3DSA:3.40.630.10 25 110 5.4E-6 T 11-10-2018 AVL55_00230 47b873387938bb771778dcf992260aa0 545 Pfam PF04389 Peptidase family M28 299 518 1.6E-43 T 11-10-2018 IPR007484 Peptidase M28 AVL55_00230 47b873387938bb771778dcf992260aa0 545 Pfam PF02225 PA domain 131 205 2.8E-5 T 11-10-2018 IPR003137 PA domain AVL55_00230 47b873387938bb771778dcf992260aa0 545 SUPERFAMILY SSF53187 32 527 2.16E-66 T 11-10-2018 AVL55_06950 11b893fc9f26ce6a9a77df04beaf82de 204 Gene3D G3DSA:1.10.357.10 63 203 9.7E-24 T 11-10-2018 AVL55_06950 11b893fc9f26ce6a9a77df04beaf82de 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AVL55_06950 11b893fc9f26ce6a9a77df04beaf82de 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 2.3E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_06950 11b893fc9f26ce6a9a77df04beaf82de 204 SUPERFAMILY SSF46689 4 83 5.99E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_06950 11b893fc9f26ce6a9a77df04beaf82de 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_06950 11b893fc9f26ce6a9a77df04beaf82de 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_06950 11b893fc9f26ce6a9a77df04beaf82de 204 Gene3D G3DSA:1.10.10.60 4 60 6.2E-20 T 11-10-2018 AVL55_06950 11b893fc9f26ce6a9a77df04beaf82de 204 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 163 201 5.2E-6 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type AVL55_14545 3302d02c099a06d97f3356351963ffa4 447 SUPERFAMILY SSF55920 192 399 6.15E-11 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AVL55_14545 3302d02c099a06d97f3356351963ffa4 447 Pfam PF00557 Metallopeptidase family M24 216 371 5.1E-8 T 11-10-2018 IPR000994 Peptidase M24 AVL55_14545 3302d02c099a06d97f3356351963ffa4 447 Gene3D G3DSA:3.90.230.10 190 431 1.0E-10 T 11-10-2018 AVL55_04475 9ddc907e43a55d6f459403425aa8245e 207 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 194 1.5E-68 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 AVL55_04475 9ddc907e43a55d6f459403425aa8245e 207 SMART SM00382 26 206 1.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_04475 9ddc907e43a55d6f459403425aa8245e 207 Pfam PF00005 ABC transporter 18 158 1.2E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_04475 9ddc907e43a55d6f459403425aa8245e 207 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_04475 9ddc907e43a55d6f459403425aa8245e 207 Gene3D G3DSA:3.40.50.300 1 204 1.8E-42 T 11-10-2018 AVL55_04475 9ddc907e43a55d6f459403425aa8245e 207 SUPERFAMILY SSF52540 2 190 8.96E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Gene3D G3DSA:1.10.460.10 172 579 2.6E-165 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 643 8.1E-254 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 SMART SM00436 140 228 9.2E-48 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Pfam PF08272 Topoisomerase I zinc-ribbon-like 766 801 2.5E-11 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Pfam PF08272 Topoisomerase I zinc-ribbon-like 832 872 8.7E-22 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Pfam PF01751 Toprim domain 5 149 2.3E-32 T 11-10-2018 IPR006171 TOPRIM domain AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 SUPERFAMILY SSF57783 752 815 2.89E-19 T 11-10-2018 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Gene3D G3DSA:3.30.65.10 706 752 1.2E-5 T 11-10-2018 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Gene3D G3DSA:3.30.65.10 753 815 3.7E-31 T 11-10-2018 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Gene3D G3DSA:3.40.50.140 1 170 2.0E-65 T 11-10-2018 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 SMART SM00437 279 535 8.2E-121 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 SUPERFAMILY SSF57783 596 630 1.19E-6 T 11-10-2018 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 717 752 3.2E-10 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 630 1.1E-5 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 SUPERFAMILY SSF56712 3 616 2.49E-203 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 SMART SM00493 3 139 7.1E-34 T 11-10-2018 IPR006171 TOPRIM domain AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Gene3D G3DSA:1.10.290.10 287 411 2.6E-165 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 1.7E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 1.7E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 1.7E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 1.7E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 498 512 1.7E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Gene3D G3DSA:2.20.25.10 816 875 4.4E-28 T 11-10-2018 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 SUPERFAMILY SSF57783 817 872 2.72E-20 T 11-10-2018 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 740 55.662 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Gene3D G3DSA:2.70.20.10 220 481 2.6E-165 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 Pfam PF01131 DNA topoisomerase 164 572 7.0E-133 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AVL55_08580 1960bbbd17e9ce52665a3c61b04463c2 884 SUPERFAMILY SSF57783 708 751 2.72E-6 T 11-10-2018 AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 Gene3D G3DSA:3.40.50.720 2 234 1.3E-61 T 11-10-2018 AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.9E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.9E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.9E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 4.9E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 4.9E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.4E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.4E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.4E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 SUPERFAMILY SSF51735 3 226 8.65E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09340 a9f2983a3e0b866bf41aeae90e28b7c4 234 Pfam PF00106 short chain dehydrogenase 3 198 3.0E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_06110 4cb2492cb11ea7f757b53c9ef6ddc0e2 177 Pfam PF05280 Flagellar transcriptional activator (FlhC) 10 167 8.0E-17 T 11-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AVL55_06110 4cb2492cb11ea7f757b53c9ef6ddc0e2 177 SUPERFAMILY SSF160930 5 163 2.88E-34 T 11-10-2018 AVL55_06110 4cb2492cb11ea7f757b53c9ef6ddc0e2 177 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 5 163 1.0E-9 T 11-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AVL55_11855 aab3eaec8d79ce53bb17e56876ef87fb 197 SUPERFAMILY SSF55811 55 192 6.53E-5 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_11855 aab3eaec8d79ce53bb17e56876ef87fb 197 Gene3D G3DSA:3.90.79.10 1 197 5.2E-41 T 11-10-2018 AVL55_14280 55b8621d5fff0a9eca58bd140ae957c1 310 Pfam PF03547 Membrane transport protein 165 299 3.9E-7 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AVL55_14280 55b8621d5fff0a9eca58bd140ae957c1 310 Pfam PF03547 Membrane transport protein 5 142 1.6E-6 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AVL55_14280 55b8621d5fff0a9eca58bd140ae957c1 310 Gene3D G3DSA:1.20.1530.20 152 309 3.3E-9 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AVL55_17775 6ed68a05cf27eca5935e0623fd175f13 352 Gene3D G3DSA:3.40.50.410 152 348 4.0E-10 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_17775 6ed68a05cf27eca5935e0623fd175f13 352 SUPERFAMILY SSF53300 150 348 3.24E-11 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_17775 6ed68a05cf27eca5935e0623fd175f13 352 Pfam PF13519 von Willebrand factor type A domain 152 272 1.4E-7 T 11-10-2018 IPR002035 von Willebrand factor, type A AVL55_00080 1f78ab0b9bf234afff8763d7e4bda75e 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 1.4E-111 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AVL55_00080 1f78ab0b9bf234afff8763d7e4bda75e 483 PIRSF PIRSF006247 1 483 2.4E-179 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AVL55_00080 1f78ab0b9bf234afff8763d7e4bda75e 483 Pfam PF02386 Cation transport protein 39 477 4.9E-88 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 SMART SM00388 392 457 7.0E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 Pfam PF00072 Response regulator receiver domain 771 882 1.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 620 1.3E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 SMART SM01358 35 278 1.7E-21 T 11-10-2018 IPR032255 Helical bimodular sensor domain AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 Gene3D G3DSA:1.20.1480.50 269 361 3.0E-10 T 11-10-2018 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 SUPERFAMILY SSF52172 770 888 3.27E-36 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 Gene3D G3DSA:1.10.287.130 362 455 1.8E-26 T 11-10-2018 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 SUPERFAMILY SSF47384 377 458 1.35E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 SMART SM00387 504 621 3.2E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 SMART SM00448 769 882 2.9E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 SUPERFAMILY SSF55874 446 621 6.29E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 Gene3D G3DSA:3.30.565.10 456 624 2.2E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 SUPERFAMILY SSF158472 308 354 6.15E-5 T 11-10-2018 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 560 8.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 574 8.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 599 8.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 618 8.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 Pfam PF00512 His Kinase A (phospho-acceptor) domain 392 457 3.3E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_16055 f1ab782b2df458c55a2620c5228a4f49 890 Gene3D G3DSA:3.40.50.2300 767 890 1.3E-41 T 11-10-2018 AVL55_05630 6d2f96a05216651ad410f0b09ac2c3df 324 SUPERFAMILY SSF53067 1 161 6.47E-32 T 11-10-2018 AVL55_05630 6d2f96a05216651ad410f0b09ac2c3df 324 Gene3D G3DSA:3.30.420.40 3 168 2.1E-24 T 11-10-2018 AVL55_05630 6d2f96a05216651ad410f0b09ac2c3df 324 Gene3D G3DSA:3.30.420.40 169 305 6.4E-23 T 11-10-2018 AVL55_05630 6d2f96a05216651ad410f0b09ac2c3df 324 SUPERFAMILY SSF53067 168 323 1.11E-17 T 11-10-2018 AVL55_06000 d000bf3de97d024f56cf26226858b047 323 SMART SM00382 121 253 8.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_06000 d000bf3de97d024f56cf26226858b047 323 Gene3D G3DSA:3.40.50.300 79 252 2.1E-38 T 11-10-2018 AVL55_06000 d000bf3de97d024f56cf26226858b047 323 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 125 251 1.7E-30 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_06000 d000bf3de97d024f56cf26226858b047 323 SUPERFAMILY SSF52540 84 320 1.34E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06000 d000bf3de97d024f56cf26226858b047 323 Gene3D G3DSA:1.10.8.60 253 322 2.0E-5 T 11-10-2018 AVL55_10710 defd5377653b223cf74916362df983ce 543 Gene3D G3DSA:3.20.20.70 146 497 6.3E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_10710 defd5377653b223cf74916362df983ce 543 Pfam PF01645 Conserved region in glutamate synthase 154 470 7.7E-89 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AVL55_10710 defd5377653b223cf74916362df983ce 543 PIRSF PIRSF006429 5 530 3.7E-159 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein AVL55_10710 defd5377653b223cf74916362df983ce 543 PIRSF PIRSF500060 4 526 2.3E-211 T 11-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria AVL55_10710 defd5377653b223cf74916362df983ce 543 SUPERFAMILY SSF51395 4 497 4.03E-131 T 11-10-2018 AVL55_15270 87379dcf94055ba2da0b8719c2fd8643 111 Hamap MF_00910 Cell division protein FtsL [ftsL]. 25 108 15.648 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AVL55_15270 87379dcf94055ba2da0b8719c2fd8643 111 Pfam PF04999 Cell division protein FtsL 18 109 3.0E-29 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AVL55_15270 87379dcf94055ba2da0b8719c2fd8643 111 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 26 109 7.1E-19 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AVL55_05750 e99c2286b3dda51644dda8b5e4811dc2 1005 Gene3D G3DSA:3.90.1570.50 120 277 1.7E-8 T 11-10-2018 AVL55_05750 e99c2286b3dda51644dda8b5e4811dc2 1005 SUPERFAMILY SSF52540 253 538 2.66E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05750 e99c2286b3dda51644dda8b5e4811dc2 1005 Gene3D G3DSA:3.40.50.300 509 731 1.8E-22 T 11-10-2018 AVL55_05750 e99c2286b3dda51644dda8b5e4811dc2 1005 SMART SM00487 284 509 8.0E-12 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_05750 e99c2286b3dda51644dda8b5e4811dc2 1005 Pfam PF04851 Type III restriction enzyme, res subunit 288 487 2.4E-15 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AVL55_05750 e99c2286b3dda51644dda8b5e4811dc2 1005 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 59 222 3.1E-12 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AVL55_05750 e99c2286b3dda51644dda8b5e4811dc2 1005 Gene3D G3DSA:3.40.50.300 288 503 9.0E-26 T 11-10-2018 AVL55_08485 3a4b9d91bd1064b0f0fcf75196520890 423 Gene3D G3DSA:1.10.10.60 324 423 3.4E-14 T 11-10-2018 AVL55_08485 3a4b9d91bd1064b0f0fcf75196520890 423 SMART SM00342 340 422 1.5E-12 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_08485 3a4b9d91bd1064b0f0fcf75196520890 423 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 97 281 3.2E-12 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AVL55_08485 3a4b9d91bd1064b0f0fcf75196520890 423 Pfam PF12833 Helix-turn-helix domain 346 422 2.8E-11 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_17640 14f0b25a6ac1db5126318d5712a6675b 458 Gene3D G3DSA:3.40.630.10 25 362 3.8E-58 T 11-10-2018 AVL55_17640 14f0b25a6ac1db5126318d5712a6675b 458 Pfam PF04389 Peptidase family M28 117 319 1.3E-20 T 11-10-2018 IPR007484 Peptidase M28 AVL55_17640 14f0b25a6ac1db5126318d5712a6675b 458 Gene3D G3DSA:2.60.40.10 363 448 2.9E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_17640 14f0b25a6ac1db5126318d5712a6675b 458 SUPERFAMILY SSF49265 360 445 1.51E-9 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AVL55_17640 14f0b25a6ac1db5126318d5712a6675b 458 SUPERFAMILY SSF53187 37 363 3.89E-50 T 11-10-2018 AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 Gene3D G3DSA:1.10.10.60 389 442 2.7E-12 T 11-10-2018 AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 Gene3D G3DSA:3.40.50.2300 1 130 3.4E-38 T 11-10-2018 AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 Gene3D G3DSA:1.10.8.60 310 388 2.1E-20 T 11-10-2018 AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 SUPERFAMILY SSF52172 7 183 1.71E-45 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 SUPERFAMILY SSF52540 138 383 1.61E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 SUPERFAMILY SSF46689 390 440 1.43E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 Pfam PF00072 Response regulator receiver domain 12 120 2.4E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 SMART SM00382 159 302 8.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 Gene3D G3DSA:3.40.50.300 131 309 6.7E-65 T 11-10-2018 AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 Pfam PF00158 Sigma-54 interaction domain 139 305 1.4E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_06780 7b1f9f4725ba4913c6616e1426ac104f 446 SMART SM00448 9 120 4.2E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12365 9bbbfaec758e1d5804bb23b9b4324086 134 SUPERFAMILY SSF54593 3 128 1.75E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_12365 9bbbfaec758e1d5804bb23b9b4324086 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 125 1.5E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AVL55_12365 9bbbfaec758e1d5804bb23b9b4324086 134 Gene3D G3DSA:3.10.180.10 5 129 1.0E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 SMART SM00345 8 67 2.9E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 3.4E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 Gene3D G3DSA:3.40.1410.10 65 215 2.9E-28 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 Gene3D G3DSA:1.10.10.10 1 64 2.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 8.3E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 8.3E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 Pfam PF07702 UTRA domain 88 208 2.1E-28 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 SMART SM00866 88 226 3.0E-18 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 SUPERFAMILY SSF46785 2 71 2.26E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_04145 93b65df3fa154d4a8af568eceaafc77a 274 SUPERFAMILY SSF64288 55 207 2.98E-35 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AVL55_14355 d499d77da8a710f7981f4a2bbfce3d42 478 Pfam PF03929 PepSY-associated TM region 15 358 1.2E-47 T 11-10-2018 IPR005625 PepSY-associated TM protein AVL55_00865 c15ddb847e1192f06954ed831ba96958 269 Pfam PF02265 S1/P1 Nuclease 28 264 9.6E-65 T 11-10-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 AVL55_00865 c15ddb847e1192f06954ed831ba96958 269 SUPERFAMILY SSF48537 28 262 2.62E-58 T 11-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 AVL55_00865 c15ddb847e1192f06954ed831ba96958 269 Gene3D G3DSA:1.10.575.10 28 269 8.5E-64 T 11-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 AVL55_02090 e6057b6744b80951196e66da2630fcc1 142 Pfam PF03203 MerC mercury resistance protein 12 120 9.8E-28 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AVL55_01630 6e6ed7e7e12fd65a260251d2ce275144 63 Pfam PF00831 Ribosomal L29 protein 5 60 5.7E-24 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01630 6e6ed7e7e12fd65a260251d2ce275144 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.702 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01630 6e6ed7e7e12fd65a260251d2ce275144 63 SUPERFAMILY SSF46561 1 61 4.06E-22 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01630 6e6ed7e7e12fd65a260251d2ce275144 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.2E-22 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01630 6e6ed7e7e12fd65a260251d2ce275144 63 Gene3D G3DSA:1.10.287.310 1 63 5.5E-29 T 11-10-2018 AVL55_12705 c5dfd6e6d54b2a36a8e94c40ee1bc8c0 497 ProSitePatterns PS00211 ABC transporters family signature. 419 433 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_12705 c5dfd6e6d54b2a36a8e94c40ee1bc8c0 497 Pfam PF00005 ABC transporter 31 164 3.1E-14 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_12705 c5dfd6e6d54b2a36a8e94c40ee1bc8c0 497 SMART SM00382 29 212 1.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_12705 c5dfd6e6d54b2a36a8e94c40ee1bc8c0 497 SMART SM00382 303 496 0.76 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_12705 c5dfd6e6d54b2a36a8e94c40ee1bc8c0 497 Pfam PF00005 ABC transporter 295 447 1.1E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_12705 c5dfd6e6d54b2a36a8e94c40ee1bc8c0 497 Gene3D G3DSA:3.40.50.300 260 497 7.0E-40 T 11-10-2018 AVL55_12705 c5dfd6e6d54b2a36a8e94c40ee1bc8c0 497 SUPERFAMILY SSF52540 273 494 4.31E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_12705 c5dfd6e6d54b2a36a8e94c40ee1bc8c0 497 Gene3D G3DSA:3.40.50.300 21 232 2.9E-23 T 11-10-2018 AVL55_12705 c5dfd6e6d54b2a36a8e94c40ee1bc8c0 497 SUPERFAMILY SSF52540 29 210 1.92E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11215 8acc6ca781c30115d448cb279ae2de2f 365 SUPERFAMILY SSF51395 2 352 1.1E-98 T 11-10-2018 AVL55_11215 8acc6ca781c30115d448cb279ae2de2f 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 351 3.3E-68 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AVL55_11215 8acc6ca781c30115d448cb279ae2de2f 365 Gene3D G3DSA:3.20.20.70 4 361 2.0E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 Pfam PF04963 Sigma-54 factor, core binding domain 127 319 4.8E-59 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 471 478 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 7.2E-17 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 PRINTS PR00045 Sigma-54 factor signature 466 484 1.4E-29 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 PRINTS PR00045 Sigma-54 factor signature 392 404 1.4E-29 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 PRINTS PR00045 Sigma-54 factor signature 202 219 1.4E-29 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 PRINTS PR00045 Sigma-54 factor signature 408 419 1.4E-29 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 Gene3D G3DSA:1.10.10.60 433 490 5.6E-24 T 11-10-2018 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 490 1.0E-155 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 Gene3D G3DSA:1.10.10.1330 129 266 1.2E-21 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 PIRSF PIRSF000774 1 493 1.1E-150 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 Pfam PF04552 Sigma-54, DNA binding domain 333 490 1.8E-71 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AVL55_03550 a9f1fbe3f6d3f5c790cc30fce3817372 493 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 380 399 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 511 3.5E-226 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 SUPERFAMILY SSF55021 334 421 2.06E-26 T 11-10-2018 AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 Gene3D G3DSA:3.40.50.1100 20 325 6.2E-125 T 11-10-2018 AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 33 314 3.7E-74 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 Gene3D G3DSA:3.40.50.1100 56 155 6.2E-125 T 11-10-2018 AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 SUPERFAMILY SSF55021 418 511 7.32E-25 T 11-10-2018 AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 Gene3D G3DSA:3.40.1020.10 336 513 1.7E-69 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 511 7.0E-26 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 417 3.1E-26 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AVL55_19635 32045e0a388ccba177675ff2dc5d83b6 517 SUPERFAMILY SSF53686 9 359 5.76E-97 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 Gene3D G3DSA:2.170.280.10 226 351 4.1E-28 T 11-10-2018 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 PRINTS PR00207 Flagellin signature 33 50 2.3E-13 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 PRINTS PR00207 Flagellin signature 72 91 2.3E-13 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 PRINTS PR00207 Flagellin signature 107 130 2.3E-13 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 Pfam PF00700 Bacterial flagellin C-terminal helical region 359 443 1.1E-12 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 SUPERFAMILY SSF64518 3 443 6.15E-66 T 11-10-2018 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 Pfam PF00669 Bacterial flagellin N-terminal helical region 18 130 2.1E-27 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 Gene3D G3DSA:1.20.58.1830 18 29 7.8E-45 T 11-10-2018 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 Gene3D G3DSA:1.20.58.1830 409 443 4.1E-28 T 11-10-2018 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 Gene3D G3DSA:1.20.1330.10 41 137 7.8E-45 T 11-10-2018 AVL55_17480 a68aa91a984d6e0007fdbf905f06537c 449 Gene3D G3DSA:1.20.1330.10 352 403 4.1E-28 T 11-10-2018 AVL55_18420 131c5b700909ef328839d7002c098f55 322 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AVL55_18420 131c5b700909ef328839d7002c098f55 322 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AVL55_18420 131c5b700909ef328839d7002c098f55 322 SUPERFAMILY SSF53613 1 320 2.03E-76 T 11-10-2018 IPR029056 Ribokinase-like AVL55_18420 131c5b700909ef328839d7002c098f55 322 Gene3D G3DSA:3.40.1190.20 1 322 6.6E-92 T 11-10-2018 IPR029056 Ribokinase-like AVL55_18420 131c5b700909ef328839d7002c098f55 322 Pfam PF00294 pfkB family carbohydrate kinase 2 316 3.0E-59 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AVL55_06660 bf0c2c8015d65a934c1dcb316c2670b9 418 SUPERFAMILY SSF53474 88 288 4.4E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_06660 bf0c2c8015d65a934c1dcb316c2670b9 418 Pfam PF12146 Serine aminopeptidase, S33 89 288 2.9E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AVL55_06660 bf0c2c8015d65a934c1dcb316c2670b9 418 Gene3D G3DSA:3.40.50.1820 81 299 6.3E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_15750 7cf4a01bba11f900ca0c41d231bc180c 393 SUPERFAMILY SSF54506 4 183 1.8E-68 T 11-10-2018 AVL55_15750 7cf4a01bba11f900ca0c41d231bc180c 393 Gene3D G3DSA:3.10.310.10 12 386 5.5E-148 T 11-10-2018 AVL55_15750 7cf4a01bba11f900ca0c41d231bc180c 393 Pfam PF04303 PrpF protein 7 389 5.3E-164 T 11-10-2018 IPR007400 PrpF protein AVL55_15750 7cf4a01bba11f900ca0c41d231bc180c 393 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 6 391 3.0E-217 T 11-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AVL55_15750 7cf4a01bba11f900ca0c41d231bc180c 393 SUPERFAMILY SSF54506 187 390 2.75E-75 T 11-10-2018 AVL55_15750 7cf4a01bba11f900ca0c41d231bc180c 393 Gene3D G3DSA:3.10.310.10 182 372 5.5E-148 T 11-10-2018 AVL55_18450 e05132095f0af0c95f54036766f8c820 329 Gene3D G3DSA:3.40.50.1820 42 329 8.5E-82 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_18450 e05132095f0af0c95f54036766f8c820 329 SUPERFAMILY SSF53474 45 310 1.06E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_18450 e05132095f0af0c95f54036766f8c820 329 Pfam PF00561 alpha/beta hydrolase fold 50 159 7.8E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_15240 3f09c3f47bade4a28e71532b32e6be05 474 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 341 365 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15240 3f09c3f47bade4a28e71532b32e6be05 474 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 25 392 41.638 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15240 3f09c3f47bade4a28e71532b32e6be05 474 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 28 382 2.9E-127 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15240 3f09c3f47bade4a28e71532b32e6be05 474 Pfam PF01098 Cell cycle protein 30 382 3.0E-109 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_17075 878cd6e6b1e961de51d0e873fe6ef424 392 Gene3D G3DSA:3.40.50.720 1 392 1.6E-173 T 11-10-2018 AVL55_17075 878cd6e6b1e961de51d0e873fe6ef424 392 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 53.967 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_17075 878cd6e6b1e961de51d0e873fe6ef424 392 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 7.3E-25 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_17075 878cd6e6b1e961de51d0e873fe6ef424 392 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.9E-112 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_17075 878cd6e6b1e961de51d0e873fe6ef424 392 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.5E-37 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AVL55_09540 3cfd4b3ef91060709bf5d21c8f1994f6 258 Pfam PF00899 ThiF family 15 256 2.3E-36 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AVL55_09540 3cfd4b3ef91060709bf5d21c8f1994f6 258 SUPERFAMILY SSF69572 4 257 6.67E-63 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AVL55_09540 3cfd4b3ef91060709bf5d21c8f1994f6 258 Gene3D G3DSA:3.40.50.720 2 258 4.0E-99 T 11-10-2018 AVL55_06080 7f3d400b4c9862be26053f6a8c2e50a8 313 Gene3D G3DSA:1.10.10.10 11 99 7.6E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_06080 7f3d400b4c9862be26053f6a8c2e50a8 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 1.8E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_06080 7f3d400b4c9862be26053f6a8c2e50a8 313 Pfam PF03466 LysR substrate binding domain 108 304 8.6E-25 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_06080 7f3d400b4c9862be26053f6a8c2e50a8 313 SUPERFAMILY SSF53850 102 307 3.08E-37 T 11-10-2018 AVL55_06080 7f3d400b4c9862be26053f6a8c2e50a8 313 SUPERFAMILY SSF46785 15 93 2.86E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_06080 7f3d400b4c9862be26053f6a8c2e50a8 313 Gene3D G3DSA:3.40.190.10 109 305 2.4E-45 T 11-10-2018 AVL55_06080 7f3d400b4c9862be26053f6a8c2e50a8 313 Gene3D G3DSA:3.40.190.10 183 281 2.4E-45 T 11-10-2018 AVL55_00400 0a5d2c7b2367bbdc55db37da05b6294a 82 Pfam PF11173 Protein of unknown function (DUF2960) 1 79 1.0E-35 T 11-10-2018 IPR021343 Protein of unknown function DUF2960 AVL55_07815 827829feef96f2380729b717758b447a 357 Gene3D G3DSA:3.10.180.10 2 154 9.4E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_07815 827829feef96f2380729b717758b447a 357 PIRSF PIRSF009283 1 356 2.3E-111 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AVL55_07815 827829feef96f2380729b717758b447a 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 13 355 9.0E-120 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AVL55_07815 827829feef96f2380729b717758b447a 357 Gene3D G3DSA:3.10.180.10 155 356 2.4E-69 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_07815 827829feef96f2380729b717758b447a 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 276 3.0E-17 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AVL55_07815 827829feef96f2380729b717758b447a 357 SUPERFAMILY SSF54593 5 342 3.07E-81 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_07815 827829feef96f2380729b717758b447a 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 143 7.9E-67 T 11-10-2018 AVL55_11110 cdde0a7f1e16658fe37bcb37788075fd 317 SUPERFAMILY SSF52317 45 315 2.52E-10 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_05275 5e5fd01d9f1026622317c306877421c0 673 SMART SM00283 411 672 3.4E-73 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_05275 5e5fd01d9f1026622317c306877421c0 673 Pfam PF00672 HAMP domain 344 392 6.3E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_05275 5e5fd01d9f1026622317c306877421c0 673 Gene3D G3DSA:3.30.450.20 173 323 1.0E-21 T 11-10-2018 AVL55_05275 5e5fd01d9f1026622317c306877421c0 673 Gene3D G3DSA:1.10.287.950 341 673 2.1E-75 T 11-10-2018 AVL55_05275 5e5fd01d9f1026622317c306877421c0 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 638 1.3E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_05275 5e5fd01d9f1026622317c306877421c0 673 Pfam PF02743 Cache domain 40 304 8.3E-29 T 11-10-2018 IPR033479 Double Cache domain 1 AVL55_05275 5e5fd01d9f1026622317c306877421c0 673 SMART SM00304 342 396 1.7E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_05275 5e5fd01d9f1026622317c306877421c0 673 SUPERFAMILY SSF58104 364 673 6.93E-76 T 11-10-2018 AVL55_14425 3064af66656113eb8a2f878b12ad8bb7 836 SUPERFAMILY SSF56935 36 835 6.72E-83 T 11-10-2018 AVL55_14425 3064af66656113eb8a2f878b12ad8bb7 836 Pfam PF00593 TonB dependent receptor 381 833 3.8E-19 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_14425 3064af66656113eb8a2f878b12ad8bb7 836 Gene3D G3DSA:2.170.130.10 32 176 1.1E-17 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_14425 3064af66656113eb8a2f878b12ad8bb7 836 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 167 2.0E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_07550 ec52ef42e3f12e5293d2afdb21b18939 208 SUPERFAMILY SSF50475 5 198 6.38E-47 T 11-10-2018 AVL55_07550 ec52ef42e3f12e5293d2afdb21b18939 208 Gene3D G3DSA:2.30.110.10 15 208 2.4E-56 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AVL55_07550 ec52ef42e3f12e5293d2afdb21b18939 208 Pfam PF01613 Flavin reductase like domain 28 171 6.1E-20 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AVL55_07550 ec52ef42e3f12e5293d2afdb21b18939 208 SMART SM00903 24 178 4.3E-13 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 6.5E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 SMART SM00448 2 116 2.3E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 Pfam PF00072 Response regulator receiver domain 4 116 8.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 SMART SM00421 151 208 2.3E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 SUPERFAMILY SSF46894 148 212 1.39E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 SUPERFAMILY SSF52172 1 137 2.13E-27 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_16400 c0a847926081903a57464c6f0f1d9f6f 219 Gene3D G3DSA:3.40.50.12740 3 212 4.3E-52 T 11-10-2018 AVL55_14210 a1c7aa0fd0e8d54e701590dfc9ffbb21 828 SUPERFAMILY SSF56935 50 828 2.83E-90 T 11-10-2018 AVL55_14210 a1c7aa0fd0e8d54e701590dfc9ffbb21 828 Pfam PF00593 TonB dependent receptor 319 826 2.1E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_14210 a1c7aa0fd0e8d54e701590dfc9ffbb21 828 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 183 4.4E-11 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_14210 a1c7aa0fd0e8d54e701590dfc9ffbb21 828 Gene3D G3DSA:2.170.130.10 61 186 2.0E-8 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_10865 2c96c2884053ee909e447788f4c3bcec 242 SUPERFAMILY SSF51182 1 240 3.82E-65 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_10865 2c96c2884053ee909e447788f4c3bcec 242 Gene3D G3DSA:2.60.120.10 11 135 1.7E-83 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_10865 2c96c2884053ee909e447788f4c3bcec 242 PIRSF PIRSF006232 1 238 3.2E-50 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AVL55_10865 2c96c2884053ee909e447788f4c3bcec 242 Gene3D G3DSA:2.60.120.10 7 241 1.7E-83 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_10865 2c96c2884053ee909e447788f4c3bcec 242 Pfam PF02678 Pirin 12 119 5.4E-34 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AVL55_19160 892192783fdc359c8be6de380f1bb8e8 104 Pfam PF03091 CutA1 divalent ion tolerance protein 5 100 6.8E-35 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AVL55_19160 892192783fdc359c8be6de380f1bb8e8 104 Gene3D G3DSA:3.30.70.120 1 103 2.8E-37 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AVL55_19160 892192783fdc359c8be6de380f1bb8e8 104 SUPERFAMILY SSF54913 2 102 6.67E-34 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AVL55_07875 8037d7019832e18067393dd2e2722bc8 377 Pfam PF13533 Biotin-lipoyl like 69 113 2.1E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AVL55_07875 8037d7019832e18067393dd2e2722bc8 377 Gene3D G3DSA:2.40.420.20 47 368 1.9E-67 T 11-10-2018 AVL55_07875 8037d7019832e18067393dd2e2722bc8 377 Pfam PF13437 HlyD family secretion protein 164 265 1.4E-4 T 11-10-2018 AVL55_07875 8037d7019832e18067393dd2e2722bc8 377 Gene3D G3DSA:2.40.30.170 52 283 1.9E-67 T 11-10-2018 AVL55_07875 8037d7019832e18067393dd2e2722bc8 377 SUPERFAMILY SSF111369 56 223 3.92E-26 T 11-10-2018 AVL55_07875 8037d7019832e18067393dd2e2722bc8 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 371 7.1E-58 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_07875 8037d7019832e18067393dd2e2722bc8 377 Gene3D G3DSA:1.10.287.470 100 158 1.9E-67 T 11-10-2018 AVL55_07875 8037d7019832e18067393dd2e2722bc8 377 Gene3D G3DSA:2.40.50.100 66 198 1.9E-67 T 11-10-2018 AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 SUPERFAMILY SSF54909 61 150 3.22E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 3.8E-20 T 11-10-2018 AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 SMART SM00344 1 110 6.0E-35 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.4E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.4E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.4E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 Gene3D G3DSA:1.10.10.10 3 52 9.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 Gene3D G3DSA:3.30.70.920 54 138 8.3E-22 T 11-10-2018 AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 Pfam PF01037 Lrp/AsnC ligand binding domain 71 141 1.2E-19 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AVL55_02645 92264888e272621be5d3192b84b6e7e2 152 SUPERFAMILY SSF46785 1 61 8.08E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_00490 87060d66b297edea20db278a66fe19ad 382 Pfam PF05128 Domain of unknown function (DUF697) 254 381 4.3E-22 T 11-10-2018 IPR021147 Protein of unknown function DUF697 AVL55_04905 34f9d11a298a27046932600a7beaa051 325 SUPERFAMILY SSF82171 49 315 1.96E-6 T 11-10-2018 AVL55_16760 c1cb5e41a6e72d25f43a0f6a8ff7168e 251 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 4 251 8.9E-84 T 11-10-2018 IPR026387 Outer membrane protein AVL55_02650 72d4f926d781a316678579489e913e02 348 Gene3D G3DSA:3.90.180.10 1 347 1.3E-94 T 11-10-2018 AVL55_02650 72d4f926d781a316678579489e913e02 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AVL55_02650 72d4f926d781a316678579489e913e02 348 Pfam PF00107 Zinc-binding dehydrogenase 176 301 1.4E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_02650 72d4f926d781a316678579489e913e02 348 SMART SM00829 10 343 5.1E-8 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_02650 72d4f926d781a316678579489e913e02 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 125 1.5E-30 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AVL55_02650 72d4f926d781a316678579489e913e02 348 SUPERFAMILY SSF51735 138 312 8.74E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_02650 72d4f926d781a316678579489e913e02 348 SUPERFAMILY SSF50129 1 170 1.2E-49 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 194 1.5E-27 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 299 475 3.2E-66 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 Gene3D G3DSA:1.10.1040.50 482 706 9.5E-73 T 11-10-2018 AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 611 698 1.7E-7 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 480 573 6.4E-26 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 Gene3D G3DSA:3.40.50.720 297 480 1.6E-69 T 11-10-2018 AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 SUPERFAMILY SSF48179 605 701 8.5E-21 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 Gene3D G3DSA:3.90.226.10 2 295 3.7E-68 T 11-10-2018 AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 SUPERFAMILY SSF51735 296 476 8.1E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 SUPERFAMILY SSF52096 4 290 3.56E-50 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_08765 622199ad05e68ce5deaced7da541b4eb 707 SUPERFAMILY SSF48179 480 622 3.15E-26 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_10940 50c3845e27fccd78b6cb1b3e6e291195 145 Pfam PF10116 Protein required for attachment to host cells 7 144 5.0E-24 T 11-10-2018 IPR019291 Host attachment protein AVL55_07225 e679105e9afc98631e7ccdfca7216710 122 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 7 106 5.6E-21 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AVL55_07225 e679105e9afc98631e7ccdfca7216710 122 TIGRFAM TIGR00526 folB_dom: FolB domain 7 119 4.0E-34 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AVL55_07225 e679105e9afc98631e7ccdfca7216710 122 Pfam PF02152 Dihydroneopterin aldolase 8 116 5.1E-28 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AVL55_07225 e679105e9afc98631e7ccdfca7216710 122 SMART SM00905 8 118 2.3E-33 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AVL55_07225 e679105e9afc98631e7ccdfca7216710 122 SUPERFAMILY SSF55620 5 116 7.23E-30 T 11-10-2018 AVL55_07225 e679105e9afc98631e7ccdfca7216710 122 Gene3D G3DSA:3.30.1130.10 1 120 9.8E-42 T 11-10-2018 AVL55_16545 b4dc2a34336560d1dcce7287f2bedf70 483 Gene3D G3DSA:3.40.50.300 1 209 9.1E-77 T 11-10-2018 AVL55_16545 b4dc2a34336560d1dcce7287f2bedf70 483 SMART SM00487 20 221 3.6E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_16545 b4dc2a34336560d1dcce7287f2bedf70 483 Pfam PF00271 Helicase conserved C-terminal domain 230 338 4.0E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_16545 b4dc2a34336560d1dcce7287f2bedf70 483 SMART SM00490 257 338 1.0E-31 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_16545 b4dc2a34336560d1dcce7287f2bedf70 483 SUPERFAMILY SSF52540 72 358 6.08E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16545 b4dc2a34336560d1dcce7287f2bedf70 483 Gene3D G3DSA:3.40.50.300 213 403 2.7E-48 T 11-10-2018 AVL55_16545 b4dc2a34336560d1dcce7287f2bedf70 483 Pfam PF00270 DEAD/DEAH box helicase 26 193 6.4E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_16545 b4dc2a34336560d1dcce7287f2bedf70 483 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 461 48.508 T 11-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AVL55_16545 b4dc2a34336560d1dcce7287f2bedf70 483 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AVL55_19530 859611d7e7286cde398d4bf9437970b8 885 Gene3D G3DSA:3.40.630.10 80 353 1.7E-35 T 11-10-2018 AVL55_19530 859611d7e7286cde398d4bf9437970b8 885 SUPERFAMILY SSF53187 81 367 2.98E-56 T 11-10-2018 AVL55_19530 859611d7e7286cde398d4bf9437970b8 885 SUPERFAMILY SSF52317 645 879 2.29E-8 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_19530 859611d7e7286cde398d4bf9437970b8 885 Pfam PF00246 Zinc carboxypeptidase 92 255 5.9E-18 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AVL55_19530 859611d7e7286cde398d4bf9437970b8 885 SMART SM00631 85 390 4.5E-4 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AVL55_14185 572785ddbc83d03940344da1a43c53ba 311 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 298 1.2E-64 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AVL55_14185 572785ddbc83d03940344da1a43c53ba 311 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 308 3.4E-99 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AVL55_14185 572785ddbc83d03940344da1a43c53ba 311 PIRSF PIRSF026649 6 307 6.0E-75 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AVL55_14185 572785ddbc83d03940344da1a43c53ba 311 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 7 308 41.689 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AVL55_04775 44c9fa5be2649a3841629ac447cbe904 299 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 297 9.0E-44 T 11-10-2018 IPR000160 GGDEF domain AVL55_04775 44c9fa5be2649a3841629ac447cbe904 299 Pfam PF00990 Diguanylate cyclase, GGDEF domain 143 294 1.9E-41 T 11-10-2018 IPR000160 GGDEF domain AVL55_04775 44c9fa5be2649a3841629ac447cbe904 299 SMART SM00267 131 299 2.4E-52 T 11-10-2018 IPR000160 GGDEF domain AVL55_04775 44c9fa5be2649a3841629ac447cbe904 299 Gene3D G3DSA:3.30.70.270 133 298 1.4E-48 T 11-10-2018 AVL55_04775 44c9fa5be2649a3841629ac447cbe904 299 SUPERFAMILY SSF55073 147 297 4.32E-43 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 PRINTS PR00340 P-II protein signature 2 17 4.0E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 PRINTS PR00340 P-II protein signature 52 75 4.0E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 PRINTS PR00340 P-II protein signature 23 41 4.0E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 PRINTS PR00340 P-II protein signature 83 103 4.0E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 SMART SM00938 4 105 3.2E-68 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 PIRSF PIRSF039144 1 112 4.9E-57 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 Gene3D G3DSA:3.30.70.120 1 112 5.2E-49 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 SUPERFAMILY SSF54913 1 112 6.12E-46 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AVL55_13485 56c9902fc7003efa2d29fac10f5249df 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AVL55_00120 2f6ff82ff75865118ea81e0929e0e1ee 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 111 148 1.4E-12 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AVL55_00120 2f6ff82ff75865118ea81e0929e0e1ee 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 152 167 2.0 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AVL55_00120 2f6ff82ff75865118ea81e0929e0e1ee 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 57 1.1E-13 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AVL55_00120 2f6ff82ff75865118ea81e0929e0e1ee 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 69 105 4.0E-16 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AVL55_00120 2f6ff82ff75865118ea81e0929e0e1ee 180 SUPERFAMILY SSF57783 67 108 4.59E-12 T 11-10-2018 AVL55_00120 2f6ff82ff75865118ea81e0929e0e1ee 180 SUPERFAMILY SSF57783 111 146 8.5E-5 T 11-10-2018 AVL55_00120 2f6ff82ff75865118ea81e0929e0e1ee 180 Gene3D G3DSA:3.30.65.10 64 112 1.7E-5 T 11-10-2018 AVL55_00120 2f6ff82ff75865118ea81e0929e0e1ee 180 Gene3D G3DSA:3.30.65.10 13 63 2.4E-5 T 11-10-2018 AVL55_00120 2f6ff82ff75865118ea81e0929e0e1ee 180 SUPERFAMILY SSF57783 22 62 2.72E-10 T 11-10-2018 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 4.5E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 SMART SM00448 2 116 3.7E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 Gene3D G3DSA:3.40.50.12740 2 210 3.8E-46 T 11-10-2018 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 SUPERFAMILY SSF52172 1 163 2.85E-24 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 SUPERFAMILY SSF46894 141 208 7.82E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 Pfam PF00072 Response regulator receiver domain 4 116 3.0E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 6.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 6.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 6.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_11325 ede065a702af0b81b787b0d127e748d0 211 SMART SM00421 148 205 2.4E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_19590 e3872054b9c1c314a55a93d5ac12b975 234 Pfam PF02104 SURF1 family 18 216 1.4E-30 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_01855 c3a6de3a2e48c06382afdec44b7d3060 345 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 340 2.0E-141 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AVL55_01855 c3a6de3a2e48c06382afdec44b7d3060 345 Gene3D G3DSA:3.40.630.30 2 274 3.5E-118 T 11-10-2018 AVL55_01855 c3a6de3a2e48c06382afdec44b7d3060 345 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.0E-144 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AVL55_01855 c3a6de3a2e48c06382afdec44b7d3060 345 Gene3D G3DSA:2.40.40.20 276 342 8.2E-8 T 11-10-2018 AVL55_01855 c3a6de3a2e48c06382afdec44b7d3060 345 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 339 4.4E-145 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AVL55_01855 c3a6de3a2e48c06382afdec44b7d3060 345 SUPERFAMILY SSF55729 1 340 4.13E-136 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_09475 35acc308f6088a2032153121d752e3ec 528 SMART SM00771 386 516 9.3E-57 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AVL55_09475 35acc308f6088a2032153121d752e3ec 528 SUPERFAMILY SSF64383 388 522 7.19E-48 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AVL55_09475 35acc308f6088a2032153121d752e3ec 528 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 271 516 2.8E-43 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AVL55_09475 35acc308f6088a2032153121d752e3ec 528 Gene3D G3DSA:3.30.1400.10 385 524 4.9E-50 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AVL55_09475 35acc308f6088a2032153121d752e3ec 528 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 388 514 1.5E-45 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AVL55_09475 35acc308f6088a2032153121d752e3ec 528 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 518 23.384 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AVL55_09475 35acc308f6088a2032153121d752e3ec 528 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 389 518 5.0E-64 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AVL55_06035 a67c6900b843886eee21589b82d96181 319 Pfam PF07728 AAA domain (dynein-related subfamily) 67 186 1.2E-19 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AVL55_06035 a67c6900b843886eee21589b82d96181 319 SMART SM00382 62 216 0.0023 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_06035 a67c6900b843886eee21589b82d96181 319 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 219 311 3.9E-23 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal AVL55_06035 a67c6900b843886eee21589b82d96181 319 Gene3D G3DSA:3.40.50.300 47 223 5.6E-26 T 11-10-2018 AVL55_06035 a67c6900b843886eee21589b82d96181 319 SUPERFAMILY SSF52540 33 284 2.42E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00910 711db9affada30754845ab559a60eadb 500 Gene3D G3DSA:3.90.640.10 377 434 6.5E-10 T 11-10-2018 AVL55_00910 711db9affada30754845ab559a60eadb 500 Gene3D G3DSA:3.90.640.10 301 311 5.2E-22 T 11-10-2018 AVL55_00910 711db9affada30754845ab559a60eadb 500 SUPERFAMILY SSF53067 3 252 1.36E-21 T 11-10-2018 AVL55_00910 711db9affada30754845ab559a60eadb 500 Gene3D G3DSA:3.30.420.40 257 300 5.2E-22 T 11-10-2018 AVL55_00910 711db9affada30754845ab559a60eadb 500 Gene3D G3DSA:3.30.420.40 435 482 6.5E-10 T 11-10-2018 AVL55_00910 711db9affada30754845ab559a60eadb 500 SUPERFAMILY SSF53067 258 497 2.23E-25 T 11-10-2018 AVL55_00910 711db9affada30754845ab559a60eadb 500 Pfam PF00012 Hsp70 protein 179 310 7.0E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AVL55_00910 711db9affada30754845ab559a60eadb 500 Gene3D G3DSA:3.30.420.40 483 494 6.5E-10 T 11-10-2018 AVL55_00910 711db9affada30754845ab559a60eadb 500 Gene3D G3DSA:3.30.420.40 132 255 5.2E-22 T 11-10-2018 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Gene3D G3DSA:3.40.50.300 366 539 4.4E-72 T 11-10-2018 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Gene3D G3DSA:3.30.56.50 2 50 9.4E-21 T 11-10-2018 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 SUPERFAMILY SSF52540 367 534 2.35E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 59 93 2.0E-10 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Gene3D G3DSA:3.40.50.10050 663 769 8.2E-37 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 371 526 1.1E-33 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 286 867 4.0E-272 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Gene3D G3DSA:2.40.30.10 540 658 3.9E-40 T 11-10-2018 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 ProSitePatterns PS01176 Initiation factor 2 signature. 819 841 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 5.8E-7 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 294 344 8.2E-16 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 SUPERFAMILY SSF52156 646 775 2.75E-37 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Pfam PF11987 Translation-initiation factor 2 653 758 2.4E-36 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Gene3D G3DSA:2.40.30.10 770 867 1.2E-34 T 11-10-2018 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 SUPERFAMILY SSF50447 541 623 1.56E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 866 17.366 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 Pfam PF00009 Elongation factor Tu GTP binding domain 372 529 6.1E-36 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 SUPERFAMILY SSF50447 770 866 8.11E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_08860 2d0fd026bcf3eb57ebb005c18fd3fa80 868 SUPERFAMILY SSF46955 3 49 8.61E-11 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_09220 e8e59e521b5692f058b964959aafc0ce 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 1.2E-45 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AVL55_09220 e8e59e521b5692f058b964959aafc0ce 156 PIRSF PIRSF004505 1 155 1.2E-39 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AVL55_09220 e8e59e521b5692f058b964959aafc0ce 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.387 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AVL55_09220 e8e59e521b5692f058b964959aafc0ce 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 2.6E-75 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AVL55_09220 e8e59e521b5692f058b964959aafc0ce 156 SUPERFAMILY SSF75217 2 154 4.45E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AVL55_09220 e8e59e521b5692f058b964959aafc0ce 156 Gene3D G3DSA:3.40.1280.10 1 156 8.4E-50 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 Gene3D G3DSA:3.30.300.150 910 1023 1.6E-25 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 Gene3D G3DSA:1.20.272.10 242 362 1.5E-39 T 11-10-2018 AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 SMART SM00382 37 179 2.8E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 SUPERFAMILY SSF52540 34 222 1.31E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 2.9E-136 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 Gene3D G3DSA:3.40.50.300 13 177 1.5E-103 T 11-10-2018 AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 Gene3D G3DSA:1.10.8.60 8 239 1.5E-103 T 11-10-2018 AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.1E-46 T 11-10-2018 AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 916 1038 3.3E-25 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 SUPERFAMILY SSF48019 244 363 1.65E-26 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AVL55_13115 b9160938f8b24181b7e43c7829b7cb69 1041 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 360 6.6E-28 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AVL55_12985 3970f92410b10b27e669ccd7e379cf47 160 Pfam PF10003 Integral membrane protein (DUF2244) 15 149 2.0E-25 T 11-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane AVL55_16315 823e0b095e0578c74a8a9321b98d1c93 372 SUPERFAMILY SSF50331 243 354 9.72E-16 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AVL55_16315 823e0b095e0578c74a8a9321b98d1c93 372 Pfam PF00005 ABC transporter 33 168 1.1E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_16315 823e0b095e0578c74a8a9321b98d1c93 372 SUPERFAMILY SSF52540 5 251 6.57E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16315 823e0b095e0578c74a8a9321b98d1c93 372 Gene3D G3DSA:2.40.50.100 246 352 3.3E-13 T 11-10-2018 AVL55_16315 823e0b095e0578c74a8a9321b98d1c93 372 Gene3D G3DSA:2.40.50.140 288 348 3.3E-13 T 11-10-2018 AVL55_16315 823e0b095e0578c74a8a9321b98d1c93 372 SMART SM00382 34 226 4.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_16315 823e0b095e0578c74a8a9321b98d1c93 372 Gene3D G3DSA:3.40.50.300 1 245 2.7E-59 T 11-10-2018 AVL55_09270 48110321fec2b770d104083bfc5db53d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 7.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09270 48110321fec2b770d104083bfc5db53d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09270 48110321fec2b770d104083bfc5db53d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 7.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09270 48110321fec2b770d104083bfc5db53d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 7.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09270 48110321fec2b770d104083bfc5db53d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09270 48110321fec2b770d104083bfc5db53d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09270 48110321fec2b770d104083bfc5db53d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09270 48110321fec2b770d104083bfc5db53d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09270 48110321fec2b770d104083bfc5db53d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09270 48110321fec2b770d104083bfc5db53d 258 Gene3D G3DSA:3.40.50.720 1 257 1.3E-73 T 11-10-2018 AVL55_09270 48110321fec2b770d104083bfc5db53d 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 9.2E-49 T 11-10-2018 AVL55_09270 48110321fec2b770d104083bfc5db53d 258 SUPERFAMILY SSF51735 3 255 1.36E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09270 48110321fec2b770d104083bfc5db53d 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_01140 4d3ad5be06ebf4bab7114035b36ca9b6 474 Gene3D G3DSA:3.40.50.2000 3 469 1.1E-163 T 11-10-2018 AVL55_01140 4d3ad5be06ebf4bab7114035b36ca9b6 474 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 2 471 7.7E-157 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AVL55_01140 4d3ad5be06ebf4bab7114035b36ca9b6 474 Gene3D G3DSA:3.40.50.2000 248 454 1.1E-163 T 11-10-2018 AVL55_01140 4d3ad5be06ebf4bab7114035b36ca9b6 474 SUPERFAMILY SSF53756 4 474 4.54E-113 T 11-10-2018 AVL55_01140 4d3ad5be06ebf4bab7114035b36ca9b6 474 Hamap MF_00484 Glycogen synthase [glgA]. 1 472 39.739 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AVL55_01140 4d3ad5be06ebf4bab7114035b36ca9b6 474 Pfam PF00534 Glycosyl transferases group 1 284 434 4.5E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_01140 4d3ad5be06ebf4bab7114035b36ca9b6 474 Pfam PF08323 Starch synthase catalytic domain 2 232 2.7E-64 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 Gene3D G3DSA:3.30.1360.10 17 227 2.5E-83 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 4.8E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 SMART SM00662 23 233 4.1E-105 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 SUPERFAMILY SSF56553 53 177 1.57E-42 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 SUPERFAMILY SSF55257 7 232 8.44E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 5.9E-112 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 Gene3D G3DSA:1.10.150.20 243 328 2.2E-38 T 11-10-2018 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 327 2.0E-35 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 155 6.5E-24 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 Gene3D G3DSA:2.170.120.12 53 176 2.5E-83 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 SUPERFAMILY SSF47789 250 325 4.19E-25 T 11-10-2018 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 307 1.5E-23 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_17490 c7a16117473b0d48a88b56d118267d18 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.933 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_13760 10c81114f6c9a870ba654b422ac5450e 206 SMART SM00028 87 120 430.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13760 10c81114f6c9a870ba654b422ac5450e 206 SMART SM00028 157 190 0.0036 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_13760 10c81114f6c9a870ba654b422ac5450e 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 201 7.0E-59 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AVL55_13760 10c81114f6c9a870ba654b422ac5450e 206 PIRSF PIRSF006170 1 206 3.3E-57 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 AVL55_13760 10c81114f6c9a870ba654b422ac5450e 206 SUPERFAMILY SSF48452 91 195 1.41E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_13760 10c81114f6c9a870ba654b422ac5450e 206 Gene3D G3DSA:1.25.40.10 38 206 8.4E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 SUPERFAMILY SSF52540 288 636 1.03E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 Gene3D G3DSA:3.30.360.80 706 778 1.0E-23 T 11-10-2018 AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 Gene3D G3DSA:2.30.30.930 59 117 8.4E-18 T 11-10-2018 AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 SMART SM00490 510 594 2.2E-14 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 Gene3D G3DSA:3.40.50.10810 153 438 1.1E-89 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 Pfam PF12137 RNA polymerase recycling family C-terminal 598 950 3.0E-119 T 11-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 Gene3D G3DSA:2.30.30.140 5 57 2.4E-20 T 11-10-2018 AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 SMART SM00487 153 357 1.4E-18 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 SUPERFAMILY SSF52540 146 390 5.33E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 Gene3D G3DSA:3.40.50.300 439 626 1.0E-39 T 11-10-2018 AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 Pfam PF00176 SNF2 family N-terminal domain 127 360 2.7E-17 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 Pfam PF00271 Helicase conserved C-terminal domain 485 594 1.3E-13 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_02770 518fe45cfe7b99f0b26c43a6c2fb4179 953 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 952 27.657 T 11-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AVL55_04505 e74c446bf92d6f0f4854781f54ed98e4 233 Pfam PF08534 Redoxin 39 173 6.6E-16 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AVL55_04505 e74c446bf92d6f0f4854781f54ed98e4 233 SUPERFAMILY SSF52833 42 188 1.63E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_04505 e74c446bf92d6f0f4854781f54ed98e4 233 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AVL55_04505 e74c446bf92d6f0f4854781f54ed98e4 233 Gene3D G3DSA:3.40.30.10 24 195 7.7E-34 T 11-10-2018 AVL55_14595 74b72dad15fa5b71b6326221c7623d9b 130 Gene3D G3DSA:1.10.4040.10 76 127 7.7E-13 T 11-10-2018 AVL55_14595 74b72dad15fa5b71b6326221c7623d9b 130 Pfam PF03965 Penicillinase repressor 10 123 1.4E-35 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AVL55_14595 74b72dad15fa5b71b6326221c7623d9b 130 SUPERFAMILY SSF46785 9 128 8.53E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_14595 74b72dad15fa5b71b6326221c7623d9b 130 Gene3D G3DSA:1.10.10.10 9 75 9.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_14595 74b72dad15fa5b71b6326221c7623d9b 130 PIRSF PIRSF019455 2 130 9.9E-41 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AVL55_14820 01466a3f1295fc861d9073dd16d4b8a7 288 Pfam PF00892 EamA-like transporter family 10 138 1.3E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_14820 01466a3f1295fc861d9073dd16d4b8a7 288 SUPERFAMILY SSF103481 181 275 3.92E-8 T 11-10-2018 AVL55_14820 01466a3f1295fc861d9073dd16d4b8a7 288 SUPERFAMILY SSF103481 42 141 3.01E-13 T 11-10-2018 AVL55_15160 9e1547b2ead3aaaa57c178f52d45721a 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 1.1E-17 T 11-10-2018 IPR003004 GspF/PilC family AVL55_15160 9e1547b2ead3aaaa57c178f52d45721a 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 1.1E-17 T 11-10-2018 IPR003004 GspF/PilC family AVL55_15160 9e1547b2ead3aaaa57c178f52d45721a 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 1.1E-17 T 11-10-2018 IPR003004 GspF/PilC family AVL55_15160 9e1547b2ead3aaaa57c178f52d45721a 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 1.1E-17 T 11-10-2018 IPR003004 GspF/PilC family AVL55_15160 9e1547b2ead3aaaa57c178f52d45721a 402 Pfam PF00482 Type II secretion system (T2SS), protein F 69 191 3.7E-31 T 11-10-2018 IPR018076 Type II secretion system F domain AVL55_15160 9e1547b2ead3aaaa57c178f52d45721a 402 Pfam PF00482 Type II secretion system (T2SS), protein F 272 394 1.2E-30 T 11-10-2018 IPR018076 Type II secretion system F domain AVL55_15160 9e1547b2ead3aaaa57c178f52d45721a 402 Gene3D G3DSA:1.20.81.30 54 170 4.9E-28 T 11-10-2018 AVL55_15160 9e1547b2ead3aaaa57c178f52d45721a 402 Gene3D G3DSA:1.20.81.30 255 364 1.4E-29 T 11-10-2018 AVL55_15160 9e1547b2ead3aaaa57c178f52d45721a 402 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AVL55_02370 d844ace45a412b1617814ba2f1e73f00 372 SUPERFAMILY SSF56935 20 317 1.59E-18 T 11-10-2018 AVL55_15705 3b8df1d32234b1b5b8da3989d9169f31 396 SUPERFAMILY SSF103473 55 188 6.28E-5 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_15705 3b8df1d32234b1b5b8da3989d9169f31 396 Pfam PF07730 Histidine kinase 197 262 4.3E-13 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AVL55_15705 3b8df1d32234b1b5b8da3989d9169f31 396 Gene3D G3DSA:3.30.565.10 262 386 1.4E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_17510 2c3a0a36079b61d18da71be49df351f4 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-9 T 11-10-2018 AVL55_17510 2c3a0a36079b61d18da71be49df351f4 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17510 2c3a0a36079b61d18da71be49df351f4 38 SUPERFAMILY SSF57840 1 38 3.4E-17 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17510 2c3a0a36079b61d18da71be49df351f4 38 Pfam PF00444 Ribosomal protein L36 1 38 2.5E-20 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17510 2c3a0a36079b61d18da71be49df351f4 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.304 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17510 2c3a0a36079b61d18da71be49df351f4 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 2.3E-22 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_13370 686c941d623765d66a1b7e7694455997 342 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 13 334 2.7E-110 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AVL55_13370 686c941d623765d66a1b7e7694455997 342 Gene3D G3DSA:2.160.10.10 105 314 1.3E-61 T 11-10-2018 AVL55_13370 686c941d623765d66a1b7e7694455997 342 Gene3D G3DSA:3.40.1390.10 3 103 1.4E-30 T 11-10-2018 AVL55_13370 686c941d623765d66a1b7e7694455997 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 227 260 2.3E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_13370 686c941d623765d66a1b7e7694455997 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 149 1.2E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_13370 686c941d623765d66a1b7e7694455997 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 150 184 2.0E-10 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_13370 686c941d623765d66a1b7e7694455997 342 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 27 94 3.5E-21 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AVL55_13370 686c941d623765d66a1b7e7694455997 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 111 139 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AVL55_13370 686c941d623765d66a1b7e7694455997 342 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 10 331 34.803 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AVL55_13370 686c941d623765d66a1b7e7694455997 342 SUPERFAMILY SSF51161 39 323 3.91E-84 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_13160 1c3db43c7eae06c6e7faa8005c9208c4 449 SUPERFAMILY SSF53474 47 413 2.84E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_13160 1c3db43c7eae06c6e7faa8005c9208c4 449 Gene3D G3DSA:3.40.50.1820 41 426 2.0E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_13160 1c3db43c7eae06c6e7faa8005c9208c4 449 Pfam PF00561 alpha/beta hydrolase fold 64 413 7.1E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_01335 825ad76c5e7449303e3c560a9c3a0472 244 Pfam PF00535 Glycosyl transferase family 2 4 161 6.1E-27 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_01335 825ad76c5e7449303e3c560a9c3a0472 244 SUPERFAMILY SSF53448 2 226 1.82E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_01335 825ad76c5e7449303e3c560a9c3a0472 244 Gene3D G3DSA:3.90.550.10 1 237 8.1E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_14005 70afb168576088819eb09a719dbedeec 257 Gene3D G3DSA:2.40.10.10 128 257 6.5E-19 T 11-10-2018 AVL55_14005 70afb168576088819eb09a719dbedeec 257 Pfam PF13365 Trypsin-like peptidase domain 58 219 3.5E-21 T 11-10-2018 AVL55_14005 70afb168576088819eb09a719dbedeec 257 Gene3D G3DSA:2.40.10.10 19 126 2.2E-16 T 11-10-2018 AVL55_14005 70afb168576088819eb09a719dbedeec 257 SUPERFAMILY SSF50494 27 254 3.07E-34 T 11-10-2018 IPR009003 Peptidase S1, PA clan AVL55_05730 399900e3358484d37a5e938380184048 322 PIRSF PIRSF015558 26 318 2.7E-98 T 11-10-2018 IPR016634 WYL domain protein, s026 type AVL55_05730 399900e3358484d37a5e938380184048 322 Pfam PF13280 WYL domain 146 284 1.3E-13 T 11-10-2018 IPR026881 WYL domain AVL55_02440 2443a6ce09d9f510e4bbf7f3082f367a 444 SUPERFAMILY SSF56672 39 373 2.86E-53 T 11-10-2018 AVL55_02440 2443a6ce09d9f510e4bbf7f3082f367a 444 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 156 174 2.1E-7 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AVL55_02440 2443a6ce09d9f510e4bbf7f3082f367a 444 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 214 227 2.1E-7 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AVL55_02440 2443a6ce09d9f510e4bbf7f3082f367a 444 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 232 245 2.1E-7 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AVL55_02440 2443a6ce09d9f510e4bbf7f3082f367a 444 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 88 101 2.1E-7 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AVL55_02440 2443a6ce09d9f510e4bbf7f3082f367a 444 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 36 377 8.2E-124 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase AVL55_02440 2443a6ce09d9f510e4bbf7f3082f367a 444 Pfam PF08388 Group II intron, maturase-specific domain 314 388 2.0E-15 T 11-10-2018 IPR013597 Group II intron, maturase-specific AVL55_02440 2443a6ce09d9f510e4bbf7f3082f367a 444 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 93 300 2.0E-44 T 11-10-2018 IPR000477 Reverse transcriptase domain AVL55_02415 caed153e75c226e6ececb5ec07913f13 142 Gene3D G3DSA:3.40.630.30 2 138 7.8E-17 T 11-10-2018 AVL55_02415 caed153e75c226e6ececb5ec07913f13 142 SUPERFAMILY SSF55729 1 137 1.34E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_02415 caed153e75c226e6ececb5ec07913f13 142 Pfam PF00583 Acetyltransferase (GNAT) family 50 124 8.2E-10 T 11-10-2018 IPR000182 GNAT domain AVL55_10000 e833c26ce91ad1d51da2994118696fc6 509 Pfam PF05683 Fumarase C-terminus 289 491 1.7E-84 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AVL55_10000 e833c26ce91ad1d51da2994118696fc6 509 SUPERFAMILY SSF117457 317 489 1.57E-63 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AVL55_10000 e833c26ce91ad1d51da2994118696fc6 509 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 2.6E-49 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AVL55_10000 e833c26ce91ad1d51da2994118696fc6 509 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 2.3E-63 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AVL55_10000 e833c26ce91ad1d51da2994118696fc6 509 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 7.7E-99 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AVL55_10000 e833c26ce91ad1d51da2994118696fc6 509 Gene3D G3DSA:3.20.130.10 308 491 1.1E-60 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AVL55_10000 e833c26ce91ad1d51da2994118696fc6 509 PIRSF PIRSF001394 1 507 6.0E-218 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AVL55_13555 938fbae28e842d027a78e45e3ee270d3 155 Gene3D G3DSA:2.40.10.330 75 131 3.0E-41 T 11-10-2018 AVL55_13555 938fbae28e842d027a78e45e3ee270d3 155 SUPERFAMILY SSF54534 9 146 1.41E-35 T 11-10-2018 AVL55_13555 938fbae28e842d027a78e45e3ee270d3 155 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 11 143 1.1E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AVL55_13555 938fbae28e842d027a78e45e3ee270d3 155 Gene3D G3DSA:3.10.50.40 16 144 3.0E-41 T 11-10-2018 AVL55_15220 70193f3c56946c3aab000c809e217b97 256 Gene3D G3DSA:3.10.20.310 53 123 7.4E-20 T 11-10-2018 AVL55_15220 70193f3c56946c3aab000c809e217b97 256 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 24 245 20.284 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 AVL55_15220 70193f3c56946c3aab000c809e217b97 256 Pfam PF08478 POTRA domain, FtsQ-type 55 123 9.0E-14 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type AVL55_15220 70193f3c56946c3aab000c809e217b97 256 Pfam PF03799 Cell division protein FtsQ 127 237 1.8E-23 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB AVL55_15220 70193f3c56946c3aab000c809e217b97 256 Gene3D G3DSA:3.40.50.11690 124 251 8.0E-41 T 11-10-2018 AVL55_01450 35f26d841fad07589621eae566d7815e 599 SUPERFAMILY SSF55073 452 558 1.33E-17 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_01450 35f26d841fad07589621eae566d7815e 599 Gene3D G3DSA:3.30.70.270 445 599 3.6E-22 T 11-10-2018 AVL55_01450 35f26d841fad07589621eae566d7815e 599 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 445 571 2.7E-15 T 11-10-2018 IPR000160 GGDEF domain AVL55_01450 35f26d841fad07589621eae566d7815e 599 SUPERFAMILY SSF48452 174 281 2.02E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_01450 35f26d841fad07589621eae566d7815e 599 Pfam PF00990 Diguanylate cyclase, GGDEF domain 445 561 2.1E-16 T 11-10-2018 IPR000160 GGDEF domain AVL55_01450 35f26d841fad07589621eae566d7815e 599 SMART SM00267 437 599 3.5E-4 T 11-10-2018 IPR000160 GGDEF domain AVL55_02695 f3db1e6bcbfe8235744a18beaef226a7 501 Pfam PF01928 CYTH domain 1 201 9.6E-24 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AVL55_02695 f3db1e6bcbfe8235744a18beaef226a7 501 SUPERFAMILY SSF55154 1 224 9.65E-39 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 AVL55_02695 f3db1e6bcbfe8235744a18beaef226a7 501 Gene3D G3DSA:2.40.320.10 1 203 6.8E-28 T 11-10-2018 AVL55_02695 f3db1e6bcbfe8235744a18beaef226a7 501 SMART SM01118 1 207 2.0E-26 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 SUPERFAMILY SSF53955 173 365 1.86E-64 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 PIRSF PIRSF002799 3 783 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 Pfam PF14814 Bifunctional transglycosylase second domain 78 161 1.8E-18 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 SUPERFAMILY SSF56601 326 765 1.09E-111 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 Pfam PF00912 Transglycosylase 173 343 9.1E-56 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 Gene3D G3DSA:1.10.3810.10 165 368 7.9E-247 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 Pfam PF00905 Penicillin binding protein transpeptidase domain 436 703 9.7E-22 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 Gene3D G3DSA:3.30.2060.10 75 164 7.9E-247 T 11-10-2018 AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 33 750 5.2E-266 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_01715 08cb8056b33c82e2f7c35d3a00c85b6b 783 Gene3D G3DSA:3.40.710.10 67 723 7.9E-247 T 11-10-2018 AVL55_17215 c83660b1ea07e3a21bf284ca322a8b3e 648 Gene3D G3DSA:3.40.50.12780 50 515 6.7E-107 T 11-10-2018 AVL55_17215 c83660b1ea07e3a21bf284ca322a8b3e 648 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 51.695 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AVL55_17215 c83660b1ea07e3a21bf284ca322a8b3e 648 SUPERFAMILY SSF56801 15 643 6.28E-183 T 11-10-2018 AVL55_17215 c83660b1ea07e3a21bf284ca322a8b3e 648 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 11-10-2018 IPR020845 AMP-binding, conserved site AVL55_17215 c83660b1ea07e3a21bf284ca322a8b3e 648 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.3E-24 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AVL55_17215 c83660b1ea07e3a21bf284ca322a8b3e 648 Gene3D G3DSA:3.30.300.30 518 647 1.1E-31 T 11-10-2018 AVL55_17215 c83660b1ea07e3a21bf284ca322a8b3e 648 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 3.9E-301 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AVL55_17215 c83660b1ea07e3a21bf284ca322a8b3e 648 Pfam PF00501 AMP-binding enzyme 84 522 2.8E-91 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AVL55_17215 c83660b1ea07e3a21bf284ca322a8b3e 648 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 4.4E-21 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AVL55_07725 c6503d653274389dd65dc6d2acd0a30d 315 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 169 2.3E-59 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AVL55_07725 c6503d653274389dd65dc6d2acd0a30d 315 PIRSF PIRSF002849 1 312 3.5E-116 T 11-10-2018 AVL55_07725 c6503d653274389dd65dc6d2acd0a30d 315 SUPERFAMILY SSF52540 8 280 3.87E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07725 c6503d653274389dd65dc6d2acd0a30d 315 Gene3D G3DSA:1.10.8.300 197 306 1.2E-24 T 11-10-2018 AVL55_07725 c6503d653274389dd65dc6d2acd0a30d 315 Gene3D G3DSA:3.40.50.300 16 186 1.8E-40 T 11-10-2018 AVL55_18850 9c32db2e735b8f0bd233419e9a6938e6 188 Gene3D G3DSA:2.40.128.110 20 188 1.5E-53 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AVL55_18850 9c32db2e735b8f0bd233419e9a6938e6 188 Pfam PF04264 YceI-like domain 22 184 3.2E-40 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AVL55_18850 9c32db2e735b8f0bd233419e9a6938e6 188 SUPERFAMILY SSF101874 19 188 2.75E-55 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AVL55_18850 9c32db2e735b8f0bd233419e9a6938e6 188 SMART SM00867 21 186 1.4E-68 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AVL55_17855 077ea7c61fc58747ec67192b79644859 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 7.3E-24 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17855 077ea7c61fc58747ec67192b79644859 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 7.3E-24 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17855 077ea7c61fc58747ec67192b79644859 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.3E-24 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17855 077ea7c61fc58747ec67192b79644859 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17855 077ea7c61fc58747ec67192b79644859 70 Pfam PF01197 Ribosomal protein L31 1 65 2.1E-32 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17855 077ea7c61fc58747ec67192b79644859 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 2.7E-36 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17855 077ea7c61fc58747ec67192b79644859 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.696 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17855 077ea7c61fc58747ec67192b79644859 70 SUPERFAMILY SSF143800 1 67 1.84E-29 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17855 077ea7c61fc58747ec67192b79644859 70 Gene3D G3DSA:2.30.170.50 1 70 2.0E-35 T 11-10-2018 AVL55_03660 8bac72d9f177524c0faf3df7be799a9f 125 Pfam PF12487 Protein of unknown function (DUF3703) 10 117 7.6E-38 T 11-10-2018 IPR022172 Protein of unknown function DUF3703 AVL55_10200 083fcfdd4d3d16f410ac28cc81a5f88d 375 Pfam PF02195 ParB-like nuclease domain 114 182 2.2E-7 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AVL55_10200 083fcfdd4d3d16f410ac28cc81a5f88d 375 Gene3D G3DSA:3.90.1530.30 119 184 2.4E-6 T 11-10-2018 AVL55_10200 083fcfdd4d3d16f410ac28cc81a5f88d 375 SUPERFAMILY SSF110849 118 202 1.4E-9 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AVL55_10200 083fcfdd4d3d16f410ac28cc81a5f88d 375 SMART SM00470 110 200 0.0037 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AVL55_18445 534b430556a820e11f6b01162a1a2563 337 Pfam PF03280 Proteobacterial lipase chaperone protein 141 327 5.5E-36 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AVL55_18445 534b430556a820e11f6b01162a1a2563 337 SUPERFAMILY SSF158855 71 336 1.7E-56 T 11-10-2018 AVL55_07845 95eda84e6fd4f44e4bc785d541efacee 341 Pfam PF01548 Transposase 6 146 2.6E-16 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AVL55_07845 95eda84e6fd4f44e4bc785d541efacee 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 290 1.3E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AVL55_06845 56f9217078d1a6f245850d1d5b4c950b 188 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 187 29.975 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 AVL55_06845 56f9217078d1a6f245850d1d5b4c950b 188 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 84 187 1.2E-43 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 AVL55_06845 56f9217078d1a6f245850d1d5b4c950b 188 Gene3D G3DSA:3.30.1330.60 56 187 2.3E-43 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_06845 56f9217078d1a6f245850d1d5b4c950b 188 ProSitePatterns PS01068 OmpA-like domain. 119 163 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AVL55_06845 56f9217078d1a6f245850d1d5b4c950b 188 SUPERFAMILY SSF103088 73 185 7.19E-36 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_06845 56f9217078d1a6f245850d1d5b4c950b 188 Pfam PF00691 OmpA family 86 181 3.3E-24 T 11-10-2018 IPR006665 OmpA-like domain AVL55_06845 56f9217078d1a6f245850d1d5b4c950b 188 PRINTS PR01021 OMPA domain signature 87 109 4.7E-21 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_06845 56f9217078d1a6f245850d1d5b4c950b 188 PRINTS PR01021 OMPA domain signature 132 148 4.7E-21 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_06845 56f9217078d1a6f245850d1d5b4c950b 188 PRINTS PR01021 OMPA domain signature 117 132 4.7E-21 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_08770 e06de14003ecaf5ce9b077e6d23c4205 393 Gene3D G3DSA:3.40.47.10 4 280 1.5E-135 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08770 e06de14003ecaf5ce9b077e6d23c4205 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 3.9E-43 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AVL55_08770 e06de14003ecaf5ce9b077e6d23c4205 393 SUPERFAMILY SSF53901 1 265 3.3E-69 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08770 e06de14003ecaf5ce9b077e6d23c4205 393 SUPERFAMILY SSF53901 272 392 9.87E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08770 e06de14003ecaf5ce9b077e6d23c4205 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.7E-64 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AVL55_08770 e06de14003ecaf5ce9b077e6d23c4205 393 PIRSF PIRSF000429 1 393 1.7E-116 T 11-10-2018 IPR002155 Thiolase GO:0016747 AVL55_08770 e06de14003ecaf5ce9b077e6d23c4205 393 Gene3D G3DSA:3.40.47.10 141 387 1.5E-135 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_08770 e06de14003ecaf5ce9b077e6d23c4205 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 4.7E-126 T 11-10-2018 IPR002155 Thiolase GO:0016747 AVL55_08770 e06de14003ecaf5ce9b077e6d23c4205 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AVL55_03140 09a12dab9d6f5b3cb15ab52f33e67c05 117 SUPERFAMILY SSF55620 1 113 2.67E-31 T 11-10-2018 AVL55_03140 09a12dab9d6f5b3cb15ab52f33e67c05 117 SMART SM00905 4 114 2.7E-33 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AVL55_03140 09a12dab9d6f5b3cb15ab52f33e67c05 117 Gene3D G3DSA:3.30.1130.10 1 117 1.2E-34 T 11-10-2018 AVL55_03140 09a12dab9d6f5b3cb15ab52f33e67c05 117 TIGRFAM TIGR00526 folB_dom: FolB domain 2 117 2.0E-27 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AVL55_03140 09a12dab9d6f5b3cb15ab52f33e67c05 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.6E-30 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AVL55_03140 09a12dab9d6f5b3cb15ab52f33e67c05 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 113 6.8E-26 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AVL55_14475 d611eb3bcc4145aa6a6e3d5750de7a2f 260 Pfam PF00588 SpoU rRNA Methylase family 121 256 3.6E-26 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AVL55_14475 d611eb3bcc4145aa6a6e3d5750de7a2f 260 SMART SM00967 22 101 0.0019 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AVL55_14475 d611eb3bcc4145aa6a6e3d5750de7a2f 260 Gene3D G3DSA:3.40.1280.10 108 260 9.4E-32 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AVL55_14475 d611eb3bcc4145aa6a6e3d5750de7a2f 260 SUPERFAMILY SSF75217 115 260 1.5E-27 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AVL55_14475 d611eb3bcc4145aa6a6e3d5750de7a2f 260 Gene3D G3DSA:3.30.1330.30 1 99 5.0E-10 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AVL55_14475 d611eb3bcc4145aa6a6e3d5750de7a2f 260 SUPERFAMILY SSF55315 3 99 9.53E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AVL55_14475 d611eb3bcc4145aa6a6e3d5750de7a2f 260 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 22 98 2.1E-6 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AVL55_02235 5d8b2a6d7839ce5d3716f86b517637c3 164 SMART SM01001 2 153 1.2E-98 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AVL55_02235 5d8b2a6d7839ce5d3716f86b517637c3 164 SUPERFAMILY SSF52255 3 160 1.01E-63 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AVL55_02235 5d8b2a6d7839ce5d3716f86b517637c3 164 Pfam PF00731 AIR carboxylase 3 151 2.0E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AVL55_02235 5d8b2a6d7839ce5d3716f86b517637c3 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 31.241 T 11-10-2018 IPR033747 Class I PurE AVL55_02235 5d8b2a6d7839ce5d3716f86b517637c3 164 PIRSF PIRSF001338 1 164 3.7E-67 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AVL55_02235 5d8b2a6d7839ce5d3716f86b517637c3 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 160 4.9E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AVL55_02235 5d8b2a6d7839ce5d3716f86b517637c3 164 Gene3D G3DSA:3.40.50.7700 1 162 4.0E-70 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AVL55_08475 2549282c82257a3a895f272c594a1c2f 901 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 114 899 7.6E-167 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AVL55_08475 2549282c82257a3a895f272c594a1c2f 901 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 237 2.4E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_08475 2549282c82257a3a895f272c594a1c2f 901 Pfam PF13715 CarboxypepD_reg-like domain 34 100 2.8E-10 T 11-10-2018 AVL55_08475 2549282c82257a3a895f272c594a1c2f 901 Gene3D G3DSA:2.60.40.1120 33 108 4.6E-8 T 11-10-2018 AVL55_08475 2549282c82257a3a895f272c594a1c2f 901 SUPERFAMILY SSF49452 28 104 2.75E-10 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AVL55_08475 2549282c82257a3a895f272c594a1c2f 901 Gene3D G3DSA:2.170.130.10 110 242 4.9E-14 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_08475 2549282c82257a3a895f272c594a1c2f 901 Pfam PF00593 TonB dependent receptor 407 898 1.0E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_08475 2549282c82257a3a895f272c594a1c2f 901 Gene3D G3DSA:2.40.170.20 265 900 9.7E-53 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_08475 2549282c82257a3a895f272c594a1c2f 901 SUPERFAMILY SSF56935 115 899 1.15E-102 T 11-10-2018 AVL55_15815 a9a5a69519c10c732b7c63dcd701ae68 301 Pfam PF01497 Periplasmic binding protein 57 251 4.4E-22 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AVL55_15815 a9a5a69519c10c732b7c63dcd701ae68 301 Gene3D G3DSA:3.40.50.1980 54 171 4.2E-31 T 11-10-2018 AVL55_15815 a9a5a69519c10c732b7c63dcd701ae68 301 Gene3D G3DSA:3.40.50.1980 174 299 7.0E-20 T 11-10-2018 AVL55_15815 a9a5a69519c10c732b7c63dcd701ae68 301 SUPERFAMILY SSF53807 56 297 5.49E-46 T 11-10-2018 AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 3.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 3.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 Gene3D G3DSA:3.40.50.720 1 255 4.4E-75 T 11-10-2018 AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 SUPERFAMILY SSF51735 3 254 1.97E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 3 254 1.1E-102 T 11-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07370 48191d64d075e13cc64ef63e2f7958fd 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 253 9.1E-53 T 11-10-2018 AVL55_16590 edf46ef4d66507e669e37d8943c5dc08 148 PIRSF PIRSF004638 1 141 9.0E-15 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AVL55_16590 edf46ef4d66507e669e37d8943c5dc08 148 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 111 7.9E-13 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AVL55_07680 1fb7b37f9960412b24d2231820568241 230 Pfam PF01738 Dienelactone hydrolase family 66 212 2.7E-9 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AVL55_07680 1fb7b37f9960412b24d2231820568241 230 SUPERFAMILY SSF53474 19 228 4.09E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_07680 1fb7b37f9960412b24d2231820568241 230 Gene3D G3DSA:3.40.50.1820 25 215 6.6E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_15990 a76252c6d761984161f8dabf711544c6 125 Gene3D G3DSA:3.40.50.2300 2 124 1.0E-21 T 11-10-2018 AVL55_15990 a76252c6d761984161f8dabf711544c6 125 SUPERFAMILY SSF52172 3 122 1.25E-23 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_15990 a76252c6d761984161f8dabf711544c6 125 SMART SM00448 2 117 4.1E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_15990 a76252c6d761984161f8dabf711544c6 125 Pfam PF00072 Response regulator receiver domain 4 116 2.5E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_06070 10696838ff46f7db116f4f5b9185223a 355 Pfam PF13362 Toprim domain 249 347 1.2E-16 T 11-10-2018 IPR006171 TOPRIM domain AVL55_06070 10696838ff46f7db116f4f5b9185223a 355 Pfam PF08273 Zinc-binding domain of primase-helicase 37 75 3.1E-14 T 11-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AVL55_06070 10696838ff46f7db116f4f5b9185223a 355 SMART SM00778 37 75 5.2E-15 T 11-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AVL55_06070 10696838ff46f7db116f4f5b9185223a 355 SUPERFAMILY SSF57783 18 102 8.5E-8 T 11-10-2018 AVL55_14050 a8aa8fc76a562a4e53c39f04e5d0298f 357 SUPERFAMILY SSF55729 16 83 2.76E-5 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_14050 a8aa8fc76a562a4e53c39f04e5d0298f 357 Pfam PF13480 Acetyltransferase (GNAT) domain 154 291 2.0E-19 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AVL55_14050 a8aa8fc76a562a4e53c39f04e5d0298f 357 SUPERFAMILY SSF55729 150 311 2.93E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_14050 a8aa8fc76a562a4e53c39f04e5d0298f 357 Gene3D G3DSA:3.40.630.30 141 299 5.7E-25 T 11-10-2018 AVL55_14050 a8aa8fc76a562a4e53c39f04e5d0298f 357 Gene3D G3DSA:3.40.630.30 20 140 5.7E-25 T 11-10-2018 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 SUPERFAMILY SSF46689 530 635 1.47E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 Pfam PF02954 Bacterial regulatory protein, Fis family 606 632 2.6E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 Gene3D G3DSA:1.10.8.60 492 567 8.8E-9 T 11-10-2018 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 343 356 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 406 421 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 SMART SM00382 339 483 8.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 Gene3D G3DSA:3.30.450.40 1 183 5.7E-45 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 Pfam PF00158 Sigma-54 interaction domain 326 486 6.3E-63 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 Gene3D G3DSA:1.10.10.60 594 635 4.1E-10 T 11-10-2018 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 599 616 3.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 616 636 3.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 Gene3D G3DSA:3.40.50.300 304 491 1.4E-57 T 11-10-2018 AVL55_16325 700623ca7b263b6980412a3c7d06d7f7 636 SUPERFAMILY SSF52540 327 560 2.54E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04455 708b25635ea022a69313f63eec3704b0 273 Gene3D G3DSA:3.40.50.300 10 246 1.1E-63 T 11-10-2018 AVL55_04455 708b25635ea022a69313f63eec3704b0 273 Pfam PF00005 ABC transporter 38 180 2.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_04455 708b25635ea022a69313f63eec3704b0 273 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_04455 708b25635ea022a69313f63eec3704b0 273 SUPERFAMILY SSF52540 33 237 5.55E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04455 708b25635ea022a69313f63eec3704b0 273 SMART SM00382 46 229 6.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_15125 980d9a65186edcc64cda76c623bf281f 891 SUPERFAMILY SSF52922 705 890 2.04E-51 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AVL55_15125 980d9a65186edcc64cda76c623bf281f 891 Gene3D G3DSA:3.40.50.970 56 470 2.1E-131 T 11-10-2018 AVL55_15125 980d9a65186edcc64cda76c623bf281f 891 PIRSF PIRSF000156 1 891 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AVL55_15125 980d9a65186edcc64cda76c623bf281f 891 Gene3D G3DSA:3.40.50.920 708 891 1.9E-67 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AVL55_15125 980d9a65186edcc64cda76c623bf281f 891 SUPERFAMILY SSF52518 57 467 5.39E-141 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_15125 980d9a65186edcc64cda76c623bf281f 891 SUPERFAMILY SSF52518 472 700 2.83E-98 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_15125 980d9a65186edcc64cda76c623bf281f 891 Gene3D G3DSA:3.40.50.970 471 705 1.3E-107 T 11-10-2018 AVL55_15125 980d9a65186edcc64cda76c623bf281f 891 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 293 1.0E-9 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AVL55_15125 980d9a65186edcc64cda76c623bf281f 891 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 890 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AVL55_02185 9ef1e2d4ecfd1dd0125d24676c5d339c 258 Pfam PF01026 TatD related DNase 4 256 4.1E-66 T 11-10-2018 IPR001130 TatD family GO:0016788 AVL55_02185 9ef1e2d4ecfd1dd0125d24676c5d339c 258 Gene3D G3DSA:3.20.20.140 2 258 5.0E-88 T 11-10-2018 AVL55_02185 9ef1e2d4ecfd1dd0125d24676c5d339c 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AVL55_02185 9ef1e2d4ecfd1dd0125d24676c5d339c 258 SUPERFAMILY SSF51556 3 257 1.87E-79 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_02185 9ef1e2d4ecfd1dd0125d24676c5d339c 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AVL55_02185 9ef1e2d4ecfd1dd0125d24676c5d339c 258 PIRSF PIRSF005902 1 258 2.3E-72 T 11-10-2018 IPR001130 TatD family GO:0016788 AVL55_09115 c6ee9ccb60a1f8878ba33f3602ae3334 106 Gene3D G3DSA:3.30.1390.10 1 106 2.1E-45 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AVL55_09115 c6ee9ccb60a1f8878ba33f3602ae3334 106 SUPERFAMILY SSF54736 21 105 1.73E-34 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AVL55_09115 c6ee9ccb60a1f8878ba33f3602ae3334 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 10 101 28.769 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AVL55_09115 c6ee9ccb60a1f8878ba33f3602ae3334 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 9.5E-36 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AVL55_07380 85e40cd4877774db2a881ccb65477bc0 473 SUPERFAMILY SSF53474 99 466 8.28E-73 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_07380 85e40cd4877774db2a881ccb65477bc0 473 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 92 466 21.805 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AVL55_07380 85e40cd4877774db2a881ccb65477bc0 473 PIRSF PIRSF000443 70 473 2.9E-105 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AVL55_07380 85e40cd4877774db2a881ccb65477bc0 473 Pfam PF00561 alpha/beta hydrolase fold 203 414 1.8E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_07380 85e40cd4877774db2a881ccb65477bc0 473 Gene3D G3DSA:3.40.50.1820 115 452 6.8E-111 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_07380 85e40cd4877774db2a881ccb65477bc0 473 Gene3D G3DSA:1.10.1740.110 279 386 6.8E-111 T 11-10-2018 AVL55_01795 c27e6ae19fa6e0b2cb4ca330308d232e 426 Pfam PF00202 Aminotransferase class-III 32 397 6.4E-78 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_01795 c27e6ae19fa6e0b2cb4ca330308d232e 426 Gene3D G3DSA:3.40.640.10 69 317 1.3E-176 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_01795 c27e6ae19fa6e0b2cb4ca330308d232e 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.519 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AVL55_01795 c27e6ae19fa6e0b2cb4ca330308d232e 426 Gene3D G3DSA:3.90.1150.10 7 419 1.3E-176 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_01795 c27e6ae19fa6e0b2cb4ca330308d232e 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_01795 c27e6ae19fa6e0b2cb4ca330308d232e 426 SUPERFAMILY SSF53383 2 424 5.69E-135 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_01795 c27e6ae19fa6e0b2cb4ca330308d232e 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 8.6E-195 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AVL55_12195 6e7bff9cf2d1dd3abff5bfa16ee22981 221 Pfam PF08892 YqcI/YcgG family 13 217 4.6E-61 T 11-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 3.5E-16 T 11-10-2018 AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 3.5E-16 T 11-10-2018 AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 PRINTS PR00173 Glutamate-aspartate symporter signature 223 242 3.5E-16 T 11-10-2018 AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 3.5E-16 T 11-10-2018 AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 PRINTS PR00173 Glutamate-aspartate symporter signature 12 32 3.5E-16 T 11-10-2018 AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 3.5E-16 T 11-10-2018 AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 6 404 35.683 T 11-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 SUPERFAMILY SSF118215 18 399 7.98E-96 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 Pfam PF00375 Sodium:dicarboxylate symporter family 18 397 2.0E-67 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AVL55_04130 350d8c6f4888800bcc630795e43e7806 406 Gene3D G3DSA:1.10.3860.10 8 405 3.2E-72 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AVL55_08655 a44ef97182b45d502ea636bfff9ce94b 177 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 3.9E-20 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AVL55_11725 a8a2593f032209e7609be43929b16b7f 311 Gene3D G3DSA:3.30.1780.10 6 309 6.9E-70 T 11-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AVL55_11725 a8a2593f032209e7609be43929b16b7f 311 Gene3D G3DSA:3.40.50.720 123 294 6.9E-70 T 11-10-2018 AVL55_11725 a8a2593f032209e7609be43929b16b7f 311 PIRSF PIRSF001439 4 311 3.3E-49 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AVL55_11725 a8a2593f032209e7609be43929b16b7f 311 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 5 310 6.6E-63 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AVL55_11725 a8a2593f032209e7609be43929b16b7f 311 SUPERFAMILY SSF51735 1 309 7.79E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09105 da50f710f05177967f434badb6131d41 739 Gene3D G3DSA:3.40.718.10 146 292 1.9E-5 T 11-10-2018 AVL55_09105 da50f710f05177967f434badb6131d41 739 Gene3D G3DSA:3.40.718.10 382 648 1.3E-6 T 11-10-2018 AVL55_09105 da50f710f05177967f434badb6131d41 739 PIRSF PIRSF009407 1 739 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AVL55_09105 da50f710f05177967f434badb6131d41 739 SUPERFAMILY SSF53659 3 738 0.0 T 11-10-2018 AVL55_09105 da50f710f05177967f434badb6131d41 739 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 738 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AVL55_09105 da50f710f05177967f434badb6131d41 739 Pfam PF03971 Monomeric isocitrate dehydrogenase 5 737 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AVL55_10780 1e08c7b2ee7c823e4d26edd958ab3ae1 307 SUPERFAMILY SSF52402 154 304 3.85E-20 T 11-10-2018 AVL55_10780 1e08c7b2ee7c823e4d26edd958ab3ae1 307 PRINTS PR01438 Universal stress protein signature 275 297 2.0E-7 T 11-10-2018 IPR006015 Universal stress protein A AVL55_10780 1e08c7b2ee7c823e4d26edd958ab3ae1 307 PRINTS PR01438 Universal stress protein signature 4 22 2.0E-7 T 11-10-2018 IPR006015 Universal stress protein A AVL55_10780 1e08c7b2ee7c823e4d26edd958ab3ae1 307 PRINTS PR01438 Universal stress protein signature 257 269 2.0E-7 T 11-10-2018 IPR006015 Universal stress protein A AVL55_10780 1e08c7b2ee7c823e4d26edd958ab3ae1 307 Gene3D G3DSA:3.40.50.12370 1 307 9.1E-107 T 11-10-2018 AVL55_10780 1e08c7b2ee7c823e4d26edd958ab3ae1 307 SUPERFAMILY SSF52402 5 155 1.26E-24 T 11-10-2018 AVL55_10780 1e08c7b2ee7c823e4d26edd958ab3ae1 307 Pfam PF00582 Universal stress protein family 5 144 6.8E-17 T 11-10-2018 IPR006016 UspA AVL55_10780 1e08c7b2ee7c823e4d26edd958ab3ae1 307 Pfam PF00582 Universal stress protein family 214 297 2.3E-13 T 11-10-2018 IPR006016 UspA AVL55_05525 7a018742aff963e80f4b2b682972e371 280 Pfam PF01636 Phosphotransferase enzyme family 20 243 2.9E-16 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AVL55_05525 7a018742aff963e80f4b2b682972e371 280 Gene3D G3DSA:3.90.1200.10 112 279 4.1E-22 T 11-10-2018 AVL55_05525 7a018742aff963e80f4b2b682972e371 280 SUPERFAMILY SSF56112 57 249 1.47E-28 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 SUPERFAMILY SSF54211 568 760 1.14E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 653 759 1.0E-10 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 Pfam PF13654 AAA domain 36 543 1.9E-168 T 11-10-2018 AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 Gene3D G3DSA:3.40.50.300 9 172 4.3E-26 T 11-10-2018 AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 Gene3D G3DSA:3.40.50.300 244 456 9.3E-55 T 11-10-2018 AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 650 669 2.2E-11 T 11-10-2018 AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 710 728 2.2E-11 T 11-10-2018 AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 569 585 2.2E-11 T 11-10-2018 AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 65 84 2.2E-11 T 11-10-2018 AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 680 699 2.2E-11 T 11-10-2018 AVL55_09255 1fe360deeb35b199856002b7a55049ab 798 Gene3D G3DSA:3.30.230.10 546 781 1.6E-90 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_19360 5198c8b2f1f54f1cb8ca6dcdaec72935 142 TIGRFAM TIGR01707 gspI: type II secretion system protein I 23 120 4.2E-26 T 11-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AVL55_19360 5198c8b2f1f54f1cb8ca6dcdaec72935 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 22 42 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19360 5198c8b2f1f54f1cb8ca6dcdaec72935 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 43 5.6E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19360 5198c8b2f1f54f1cb8ca6dcdaec72935 142 SUPERFAMILY SSF54523 55 136 4.32E-25 T 11-10-2018 AVL55_19360 5198c8b2f1f54f1cb8ca6dcdaec72935 142 Gene3D G3DSA:3.30.1300.30 50 136 1.1E-26 T 11-10-2018 AVL55_19360 5198c8b2f1f54f1cb8ca6dcdaec72935 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 43 9.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_19360 5198c8b2f1f54f1cb8ca6dcdaec72935 142 Pfam PF02501 Type II secretion system (T2SS), protein I 58 135 2.7E-27 T 11-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AVL55_13090 9952ef0ff1dc52144c53c4c0196bb613 199 SUPERFAMILY SSF111304 2 199 1.7E-73 T 11-10-2018 IPR023627 Recombination protein RecR AVL55_13090 9952ef0ff1dc52144c53c4c0196bb613 199 Pfam PF02132 RecR protein 40 77 1.9E-14 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AVL55_13090 9952ef0ff1dc52144c53c4c0196bb613 199 SMART SM00493 81 166 8.8E-19 T 11-10-2018 IPR006171 TOPRIM domain AVL55_13090 9952ef0ff1dc52144c53c4c0196bb613 199 Gene3D G3DSA:3.40.1360.10 77 199 1.3E-41 T 11-10-2018 AVL55_13090 9952ef0ff1dc52144c53c4c0196bb613 199 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.6E-76 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AVL55_13090 9952ef0ff1dc52144c53c4c0196bb613 199 Pfam PF13662 Toprim domain 83 172 4.1E-24 T 11-10-2018 IPR006171 TOPRIM domain AVL55_13090 9952ef0ff1dc52144c53c4c0196bb613 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 100.742 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AVL55_13090 9952ef0ff1dc52144c53c4c0196bb613 199 Gene3D G3DSA:1.10.8.420 1 52 6.7E-17 T 11-10-2018 AVL55_18530 e72675c3118dde3b4611771e95ec89e8 160 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 21 145 2.5E-44 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AVL55_18530 e72675c3118dde3b4611771e95ec89e8 160 SUPERFAMILY SSF52540 26 136 9.56E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18530 e72675c3118dde3b4611771e95ec89e8 160 Gene3D G3DSA:3.40.50.300 5 159 6.0E-44 T 11-10-2018 AVL55_18530 e72675c3118dde3b4611771e95ec89e8 160 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 134 2.4E-38 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 Gene3D G3DSA:1.10.1440.20 562 619 1.8E-8 T 11-10-2018 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 Gene3D G3DSA:3.30.499.10 361 561 1.2E-76 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 Gene3D G3DSA:3.30.499.20 10 359 3.0E-130 T 11-10-2018 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 Pfam PF00694 Aconitase C-terminal domain 657 787 1.9E-29 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 SUPERFAMILY SSF52016 599 857 1.96E-66 T 11-10-2018 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 8.8E-146 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 Gene3D G3DSA:3.20.19.10 620 858 6.7E-82 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 SUPERFAMILY SSF53732 23 587 2.49E-185 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 11-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 PRINTS PR00415 Aconitase family signature 191 204 3.2E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 PRINTS PR00415 Aconitase family signature 360 374 3.2E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 PRINTS PR00415 Aconitase family signature 138 151 3.2E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 PRINTS PR00415 Aconitase family signature 402 413 3.2E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 PRINTS PR00415 Aconitase family signature 205 220 3.2E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 PRINTS PR00415 Aconitase family signature 464 477 3.2E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 PRINTS PR00415 Aconitase family signature 267 280 3.2E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 PRINTS PR00415 Aconitase family signature 281 294 3.2E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_15745 711523dadbd507b996eb9df8f019eb38 863 PRINTS PR00415 Aconitase family signature 162 170 3.2E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 SUPERFAMILY SSF52540 438 744 8.05E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 Gene3D G3DSA:3.40.50.300 157 351 3.9E-66 T 11-10-2018 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 2.5E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 2.5E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 2.5E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 2.5E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 5.1E-15 T 11-10-2018 IPR004176 Clp, N-terminal AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 SUPERFAMILY SSF81923 1 143 3.01E-58 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 343 6.1E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 646 1.4E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 Gene3D G3DSA:1.10.8.60 352 439 1.5E-32 T 11-10-2018 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 SMART SM00382 207 352 2.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 SMART SM00382 488 655 8.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 734 3.6E-21 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 SUPERFAMILY SSF52540 169 430 1.89E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 Gene3D G3DSA:1.10.1780.10 1 144 1.7E-41 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 Gene3D G3DSA:1.10.8.60 654 756 1.9E-27 T 11-10-2018 AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 SMART SM01086 654 743 2.8E-32 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AVL55_09120 946687cd5955e945bf12d7eb50a2713e 758 Gene3D G3DSA:3.40.50.300 440 653 7.1E-78 T 11-10-2018 AVL55_09150 2c6935338daae9dbb3db79c414d9ae8a 115 Pfam PF17283 SprT-like zinc ribbon domain 69 104 8.5E-8 T 11-10-2018 IPR035240 SprT-like, zinc ribbon domain AVL55_09150 2c6935338daae9dbb3db79c414d9ae8a 115 Pfam PF10263 SprT-like family 4 63 8.1E-11 T 11-10-2018 IPR006640 SprT-like AVL55_09150 2c6935338daae9dbb3db79c414d9ae8a 115 SMART SM00731 1 107 1.3E-8 T 11-10-2018 IPR006640 SprT-like AVL55_09195 4940ab5ef45e4117c28e1cb52a216ceb 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 22.986 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 AVL55_09195 4940ab5ef45e4117c28e1cb52a216ceb 87 Gene3D G3DSA:3.30.70.260 1 87 1.0E-28 T 11-10-2018 AVL55_09195 4940ab5ef45e4117c28e1cb52a216ceb 87 SUPERFAMILY SSF117991 1 87 1.28E-28 T 11-10-2018 IPR027471 YbeD-like domain superfamily AVL55_09195 4940ab5ef45e4117c28e1cb52a216ceb 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 1.4E-26 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 AVL55_06610 5e908ee4be1d330b45734263c2c0761a 175 Gene3D G3DSA:3.40.50.1240 15 174 1.3E-31 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AVL55_06610 5e908ee4be1d330b45734263c2c0761a 175 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 16 80 1.8E-8 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AVL55_06610 5e908ee4be1d330b45734263c2c0761a 175 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 16 168 3.1E-28 T 11-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 AVL55_06610 5e908ee4be1d330b45734263c2c0761a 175 SMART SM00855 15 136 3.7E-8 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AVL55_06610 5e908ee4be1d330b45734263c2c0761a 175 SUPERFAMILY SSF53254 16 169 2.09E-18 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AVL55_10380 1149ee4267102624cc67c2ecba56bbb3 160 SUPERFAMILY SSF50199 23 146 1.7E-7 T 11-10-2018 AVL55_04930 22fa9b05eb1b6bbd876d1b106e907fc2 476 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 110 1.3E-19 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AVL55_04930 22fa9b05eb1b6bbd876d1b106e907fc2 476 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 230 467 1.6E-40 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 AVL55_04930 22fa9b05eb1b6bbd876d1b106e907fc2 476 Pfam PF07196 Flagellin hook IN motif 134 191 1.3E-11 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AVL55_08275 d6771f144080d8c7bb836201c0476ece 156 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 3.6E-50 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AVL55_08275 d6771f144080d8c7bb836201c0476ece 156 SUPERFAMILY SSF55826 2 153 2.88E-38 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AVL55_08275 d6771f144080d8c7bb836201c0476ece 156 Gene3D G3DSA:3.90.960.10 1 155 2.3E-50 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AVL55_08275 d6771f144080d8c7bb836201c0476ece 156 Pfam PF04073 Aminoacyl-tRNA editing domain 32 143 1.1E-20 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AVL55_08275 d6771f144080d8c7bb836201c0476ece 156 PIRSF PIRSF006181 1 156 4.5E-49 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 Pfam PF00231 ATP synthase 5 285 4.7E-96 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.699 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 SUPERFAMILY SSF52943 2 286 4.02E-97 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.8E-38 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 4.8E-38 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.8E-38 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 4.8E-38 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 Gene3D G3DSA:1.10.287.80 6 282 1.2E-109 T 11-10-2018 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 Gene3D G3DSA:3.40.1380.10 61 205 1.2E-109 T 11-10-2018 AVL55_20000 e68f240a4b63164376cbb5bfc7f12d5b 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.5E-110 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_07055 b465092df310009a3102536aeca78348 256 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 246 28.508 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AVL55_07055 b465092df310009a3102536aeca78348 256 Gene3D G3DSA:3.40.50.300 1 253 5.3E-59 T 11-10-2018 AVL55_07055 b465092df310009a3102536aeca78348 256 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 89 209 1.2E-27 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AVL55_07055 b465092df310009a3102536aeca78348 256 SUPERFAMILY SSF52540 1 241 6.83E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07055 b465092df310009a3102536aeca78348 256 PIRSF PIRSF006755 1 77 9.2E-20 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AVL55_07055 b465092df310009a3102536aeca78348 256 PIRSF PIRSF006755 69 256 6.2E-43 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AVL55_07055 b465092df310009a3102536aeca78348 256 Pfam PF13500 AAA domain 2 240 9.3E-29 T 11-10-2018 AVL55_07425 c09b33aad22a150b2c4cc1676c8526aa 161 SUPERFAMILY SSF47175 36 159 2.06E-33 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AVL55_07425 c09b33aad22a150b2c4cc1676c8526aa 161 Gene3D G3DSA:1.20.120.10 33 161 3.2E-34 T 11-10-2018 AVL55_07425 c09b33aad22a150b2c4cc1676c8526aa 161 PIRSF PIRSF000027 17 161 3.2E-34 T 11-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 AVL55_07425 c09b33aad22a150b2c4cc1676c8526aa 161 PRINTS PR00608 Class II cytochrome C signature 125 148 3.3E-7 T 11-10-2018 IPR015984 Cytochrome c prime, subgroup AVL55_07425 c09b33aad22a150b2c4cc1676c8526aa 161 PRINTS PR00608 Class II cytochrome C signature 148 159 3.3E-7 T 11-10-2018 IPR015984 Cytochrome c prime, subgroup AVL55_07425 c09b33aad22a150b2c4cc1676c8526aa 161 Pfam PF01322 Cytochrome C' 39 159 5.1E-32 T 11-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 AVL55_18995 78e4022c834d166b8b23877cdca1bafb 382 Gene3D G3DSA:3.40.710.10 32 370 4.1E-63 T 11-10-2018 AVL55_18995 78e4022c834d166b8b23877cdca1bafb 382 Pfam PF00144 Beta-lactamase 39 360 3.5E-44 T 11-10-2018 IPR001466 Beta-lactamase-related AVL55_18995 78e4022c834d166b8b23877cdca1bafb 382 SUPERFAMILY SSF56601 36 376 4.7E-63 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AVL55_11350 4009eab93ee2ec80606e5c7957f74ae9 407 Gene3D G3DSA:3.90.550.10 14 325 2.2E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_11350 4009eab93ee2ec80606e5c7957f74ae9 407 SUPERFAMILY SSF53448 38 404 2.11E-94 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_06885 c3b75a909703732c3a9bfe9840664259 338 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 181 320 7.0E-25 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain AVL55_06885 c3b75a909703732c3a9bfe9840664259 338 SUPERFAMILY SSF51735 1 130 3.68E-13 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_06885 c3b75a909703732c3a9bfe9840664259 338 Gene3D G3DSA:1.10.1040.10 182 326 4.7E-31 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AVL55_06885 c3b75a909703732c3a9bfe9840664259 338 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 158 2.8E-35 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain AVL55_06885 c3b75a909703732c3a9bfe9840664259 338 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 321 3.9E-67 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AVL55_06885 c3b75a909703732c3a9bfe9840664259 338 Gene3D G3DSA:3.40.50.720 2 181 5.7E-39 T 11-10-2018 AVL55_06885 c3b75a909703732c3a9bfe9840664259 338 SUPERFAMILY SSF48179 181 321 1.26E-22 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_08430 045ef56db4607543030c479a95218fed 269 Gene3D G3DSA:3.40.50.1820 126 247 2.7E-16 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_08430 045ef56db4607543030c479a95218fed 269 SUPERFAMILY SSF53474 118 247 2.55E-16 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_17620 297a26c291fc18815becbc46a5d24aa5 214 SMART SM00671 112 147 1.1E-5 T 11-10-2018 IPR006597 Sel1-like repeat AVL55_17620 297a26c291fc18815becbc46a5d24aa5 214 SMART SM00671 148 183 87.0 T 11-10-2018 IPR006597 Sel1-like repeat AVL55_17620 297a26c291fc18815becbc46a5d24aa5 214 SMART SM00671 76 111 8.5 T 11-10-2018 IPR006597 Sel1-like repeat AVL55_17620 297a26c291fc18815becbc46a5d24aa5 214 Gene3D G3DSA:1.25.40.10 24 214 1.1E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_17620 297a26c291fc18815becbc46a5d24aa5 214 SUPERFAMILY SSF81901 73 191 2.09E-19 T 11-10-2018 AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 SUPERFAMILY SSF111331 239 536 1.05E-54 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 SUPERFAMILY SSF52799 85 228 1.77E-28 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 SMART SM00195 90 229 6.5E-21 T 11-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 Gene3D G3DSA:3.40.50.10330 235 367 1.1E-30 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 Pfam PF00782 Dual specificity phosphatase, catalytic domain 99 228 2.5E-19 T 11-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 Pfam PF00781 Diacylglycerol kinase catalytic domain 241 365 2.1E-27 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 Gene3D G3DSA:3.90.190.10 87 233 3.5E-27 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 SMART SM00404 137 232 0.0071 T 11-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 Gene3D G3DSA:2.60.200.40 368 527 2.8E-23 T 11-10-2018 AVL55_09330 ba3b6adcd23be90eabed0a46eb03e0d9 542 SMART SM00046 240 374 6.4E-8 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AVL55_06700 d22c5d674962e102f2b91c428d61b104 238 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 12 210 2.2E-67 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AVL55_06700 d22c5d674962e102f2b91c428d61b104 238 PIRSF PIRSF000386 1 237 8.2E-96 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AVL55_06700 d22c5d674962e102f2b91c428d61b104 238 Gene3D G3DSA:3.40.1280.10 1 154 9.8E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AVL55_06700 d22c5d674962e102f2b91c428d61b104 238 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 223 4.7E-97 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AVL55_06700 d22c5d674962e102f2b91c428d61b104 238 Gene3D G3DSA:1.10.1270.20 155 238 4.1E-34 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AVL55_06700 d22c5d674962e102f2b91c428d61b104 238 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 238 110.248 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AVL55_06700 d22c5d674962e102f2b91c428d61b104 238 SUPERFAMILY SSF75217 1 234 8.5E-97 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AVL55_03830 4887aaca96bd9a6a7fabfa56827214e0 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 4.3E-29 T 11-10-2018 IPR032806 H repeat-associated protein, N-terminal AVL55_03830 4887aaca96bd9a6a7fabfa56827214e0 373 Pfam PF01609 Transposase DDE domain 107 334 1.7E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AVL55_15560 9bbcb7f458320c6b5807d118865317a6 155 SUPERFAMILY SSF52788 1 134 6.28E-37 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AVL55_15560 9bbcb7f458320c6b5807d118865317a6 155 SMART SM00226 1 135 4.0E-33 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AVL55_15560 9bbcb7f458320c6b5807d118865317a6 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 132 1.4E-19 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AVL55_15560 9bbcb7f458320c6b5807d118865317a6 155 Gene3D G3DSA:3.40.50.2300 1 137 1.1E-37 T 11-10-2018 AVL55_18845 0a1924e099b96714f0bfce52245f2509 175 SUPERFAMILY SSF81342 3 172 1.18E-37 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AVL55_18845 0a1924e099b96714f0bfce52245f2509 175 Pfam PF01292 Prokaryotic cytochrome b561 4 172 7.2E-30 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AVL55_18845 0a1924e099b96714f0bfce52245f2509 175 Gene3D G3DSA:1.20.950.20 2 81 5.4E-6 T 11-10-2018 AVL55_02915 f26ab69f804e996617637295ac84acb9 410 Pfam PF05175 Methyltransferase small domain 231 405 1.0E-45 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AVL55_02915 f26ab69f804e996617637295ac84acb9 410 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 409 47.422 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AVL55_02915 f26ab69f804e996617637295ac84acb9 410 PIRSF PIRSF037565 1 410 1.8E-133 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AVL55_02915 f26ab69f804e996617637295ac84acb9 410 Gene3D G3DSA:3.40.50.150 8 208 1.6E-52 T 11-10-2018 AVL55_02915 f26ab69f804e996617637295ac84acb9 410 Gene3D G3DSA:3.40.50.150 218 410 8.5E-46 T 11-10-2018 AVL55_02915 f26ab69f804e996617637295ac84acb9 410 SUPERFAMILY SSF53335 231 393 3.72E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_02915 f26ab69f804e996617637295ac84acb9 410 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 338 344 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AVL55_00735 df96b43d09c661b39bfe53f8fd156376 246 Gene3D G3DSA:3.40.30.10 13 78 1.7E-11 T 11-10-2018 AVL55_00735 df96b43d09c661b39bfe53f8fd156376 246 SUPERFAMILY SSF52833 3 77 7.97E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_00735 df96b43d09c661b39bfe53f8fd156376 246 Pfam PF00462 Glutaredoxin 16 67 1.8E-6 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AVL55_05055 3efa44d03ba5d059f9c15e3eaa738886 348 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 338 7.6E-45 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AVL55_05055 3efa44d03ba5d059f9c15e3eaa738886 348 Gene3D G3DSA:3.40.640.10 1 226 1.0E-43 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_05055 3efa44d03ba5d059f9c15e3eaa738886 348 SUPERFAMILY SSF53383 6 343 2.85E-53 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_05055 3efa44d03ba5d059f9c15e3eaa738886 348 PIRSF PIRSF000390 1 346 9.4E-43 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AVL55_05055 3efa44d03ba5d059f9c15e3eaa738886 348 Gene3D G3DSA:3.90.1150.10 227 344 5.1E-12 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_01000 7bda947e12e9c9ee349fc851e0553b0e 410 Pfam PF03150 Di-haem cytochrome c peroxidase 48 260 9.5E-17 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AVL55_01000 7bda947e12e9c9ee349fc851e0553b0e 410 Gene3D G3DSA:1.10.760.10 38 250 1.1E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_01000 7bda947e12e9c9ee349fc851e0553b0e 410 SUPERFAMILY SSF46626 249 410 3.15E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_01000 7bda947e12e9c9ee349fc851e0553b0e 410 SUPERFAMILY SSF46626 46 150 1.41E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_01000 7bda947e12e9c9ee349fc851e0553b0e 410 Gene3D G3DSA:1.10.760.10 251 410 1.3E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 Pfam PF01037 Lrp/AsnC ligand binding domain 75 149 5.4E-20 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 SMART SM00344 9 118 1.6E-48 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 2.4E-20 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 2.4E-20 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 2.4E-20 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 SUPERFAMILY SSF46785 8 68 4.74E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 ProSitePatterns PS00519 AsnC-type HTH domain signature. 27 53 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 SUPERFAMILY SSF54909 71 156 7.37E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 56 9.4E-21 T 11-10-2018 AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 Gene3D G3DSA:3.30.70.920 61 155 7.6E-24 T 11-10-2018 AVL55_10980 d40a6c8ac25ff73ad17dd6e240c5f63e 161 Gene3D G3DSA:1.10.10.10 3 60 4.9E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_17915 759efff51b14cf8bd4f3c70529c670d7 408 PIRSF PIRSF003180 1 404 2.4E-133 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AVL55_17915 759efff51b14cf8bd4f3c70529c670d7 408 Pfam PF08668 HDOD domain 204 320 7.2E-14 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AVL55_17915 759efff51b14cf8bd4f3c70529c670d7 408 Gene3D G3DSA:3.20.20.450 3 194 1.1E-18 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_17915 759efff51b14cf8bd4f3c70529c670d7 408 SUPERFAMILY SSF109604 181 398 1.32E-40 T 11-10-2018 AVL55_17915 759efff51b14cf8bd4f3c70529c670d7 408 SMART SM00052 5 195 2.1E-4 T 11-10-2018 IPR001633 EAL domain AVL55_17915 759efff51b14cf8bd4f3c70529c670d7 408 Gene3D G3DSA:1.10.3210.10 195 338 1.2E-22 T 11-10-2018 AVL55_17915 759efff51b14cf8bd4f3c70529c670d7 408 SUPERFAMILY SSF141868 4 192 3.53E-29 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_17915 759efff51b14cf8bd4f3c70529c670d7 408 Pfam PF00563 EAL domain 77 190 5.7E-14 T 11-10-2018 IPR001633 EAL domain AVL55_16030 19ac2b55bb3ad9c661f30278514d2c77 131 Pfam PF06877 Regulator of ribonuclease activity B 12 113 4.0E-29 T 11-10-2018 IPR009671 Regulator of ribonuclease activity B domain AVL55_16030 19ac2b55bb3ad9c661f30278514d2c77 131 PIRSF PIRSF018193 1 131 3.4E-45 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B AVL55_16030 19ac2b55bb3ad9c661f30278514d2c77 131 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 5 117 29.817 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B AVL55_16030 19ac2b55bb3ad9c661f30278514d2c77 131 Gene3D G3DSA:3.30.70.970 1 127 2.1E-45 T 11-10-2018 IPR036701 RraB-like superfamily AVL55_16030 19ac2b55bb3ad9c661f30278514d2c77 131 SUPERFAMILY SSF89946 5 123 1.01E-35 T 11-10-2018 IPR036701 RraB-like superfamily AVL55_07515 bb11724fa0c94c4d2fc68a6d5bbab756 360 SUPERFAMILY SSF52540 116 292 6.0E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07515 bb11724fa0c94c4d2fc68a6d5bbab756 360 Gene3D G3DSA:3.40.50.300 114 320 5.7E-75 T 11-10-2018 AVL55_07515 bb11724fa0c94c4d2fc68a6d5bbab756 360 Pfam PF02562 PhoH-like protein 117 320 9.4E-96 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AVL55_02785 c9a0599d6c4ebe1e5d07884752797d85 465 Gene3D G3DSA:3.90.1150.10 96 449 2.0E-84 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_02785 c9a0599d6c4ebe1e5d07884752797d85 465 SMART SM00345 7 66 5.0E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_02785 c9a0599d6c4ebe1e5d07884752797d85 465 SUPERFAMILY SSF46785 3 70 9.0E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_02785 c9a0599d6c4ebe1e5d07884752797d85 465 Gene3D G3DSA:3.40.640.10 137 356 2.0E-84 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_02785 c9a0599d6c4ebe1e5d07884752797d85 465 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.4E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_02785 c9a0599d6c4ebe1e5d07884752797d85 465 SUPERFAMILY SSF53383 89 444 6.66E-83 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_02785 c9a0599d6c4ebe1e5d07884752797d85 465 Gene3D G3DSA:1.10.10.10 1 95 3.4E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_02785 c9a0599d6c4ebe1e5d07884752797d85 465 Pfam PF00155 Aminotransferase class I and II 123 454 6.5E-35 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_02940 6525db72283f96d70257576837ab0617 446 Pfam PF03861 ANTAR domain 384 436 7.9E-15 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 AVL55_02940 6525db72283f96d70257576837ab0617 446 Pfam PF08376 Nitrate and nitrite sensing 46 290 6.8E-43 T 11-10-2018 IPR013587 Nitrate/nitrite sensing protein AVL55_02940 6525db72283f96d70257576837ab0617 446 SMART SM01012 381 436 1.6E-17 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 AVL55_02940 6525db72283f96d70257576837ab0617 446 Gene3D G3DSA:1.10.10.10 384 443 1.7E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_02940 6525db72283f96d70257576837ab0617 446 SUPERFAMILY SSF52172 367 436 1.34E-12 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_00905 f322b4d509a8070ca82b4559cd5b7833 139 Pfam PF13279 Thioesterase-like superfamily 13 128 4.4E-15 T 11-10-2018 AVL55_00905 f322b4d509a8070ca82b4559cd5b7833 139 SUPERFAMILY SSF54637 8 133 4.05E-35 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_00905 f322b4d509a8070ca82b4559cd5b7833 139 Gene3D G3DSA:3.10.129.10 8 136 2.0E-35 T 11-10-2018 AVL55_13245 27ff8ee83a0d8ade7e5b795c174094dd 251 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 32 248 2.8E-66 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AVL55_13245 27ff8ee83a0d8ade7e5b795c174094dd 251 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 45 247 3.9E-55 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AVL55_13245 27ff8ee83a0d8ade7e5b795c174094dd 251 Gene3D G3DSA:3.60.140.10 6 251 5.1E-78 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AVL55_13245 27ff8ee83a0d8ade7e5b795c174094dd 251 SUPERFAMILY SSF64438 15 249 2.38E-74 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AVL55_01595 14614456a75302e4f8d8acfca3b950fb 201 SUPERFAMILY SSF52166 10 200 1.09E-73 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_01595 14614456a75302e4f8d8acfca3b950fb 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 1.3E-65 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AVL55_01595 14614456a75302e4f8d8acfca3b950fb 201 Gene3D G3DSA:3.40.1370.10 2 201 3.5E-71 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_01595 14614456a75302e4f8d8acfca3b950fb 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.5E-75 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01595 14614456a75302e4f8d8acfca3b950fb 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.358 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_15480 4308276b87bc2873c131aefa90c7eba8 149 Pfam PF01381 Helix-turn-helix 1 40 1.8E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_15480 4308276b87bc2873c131aefa90c7eba8 149 Pfam PF07883 Cupin domain 72 133 4.3E-7 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AVL55_15480 4308276b87bc2873c131aefa90c7eba8 149 SUPERFAMILY SSF51182 52 143 8.15E-16 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_15480 4308276b87bc2873c131aefa90c7eba8 149 Gene3D G3DSA:2.60.120.10 55 149 7.2E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_15480 4308276b87bc2873c131aefa90c7eba8 149 Gene3D G3DSA:1.10.260.40 1 47 2.2E-9 T 11-10-2018 AVL55_15480 4308276b87bc2873c131aefa90c7eba8 149 SUPERFAMILY SSF47413 1 44 3.38E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_11260 a36b0e31c6ee79255fb56163ca357bd6 487 Gene3D G3DSA:3.30.2010.10 75 154 3.8E-8 T 11-10-2018 AVL55_11260 a36b0e31c6ee79255fb56163ca357bd6 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 487 40.853 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AVL55_11260 a36b0e31c6ee79255fb56163ca357bd6 487 Gene3D G3DSA:1.25.40.10 352 486 1.9E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_11260 a36b0e31c6ee79255fb56163ca357bd6 487 SUPERFAMILY SSF48452 292 461 9.22E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_11260 a36b0e31c6ee79255fb56163ca357bd6 487 Pfam PF01435 Peptidase family M48 75 261 4.8E-32 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AVL55_11260 a36b0e31c6ee79255fb56163ca357bd6 487 Gene3D G3DSA:1.25.40.10 246 351 1.8E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_05890 b78dc0b40bf0feb8f1a5ae37e19eb7f9 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.4E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_05890 b78dc0b40bf0feb8f1a5ae37e19eb7f9 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 32 47 1.4E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_05890 b78dc0b40bf0feb8f1a5ae37e19eb7f9 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 62 1.4E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_05890 b78dc0b40bf0feb8f1a5ae37e19eb7f9 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 79 94 1.4E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_05890 b78dc0b40bf0feb8f1a5ae37e19eb7f9 117 SMART SM00418 30 108 6.7E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_05890 b78dc0b40bf0feb8f1a5ae37e19eb7f9 117 SUPERFAMILY SSF46785 22 103 7.69E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_05890 b78dc0b40bf0feb8f1a5ae37e19eb7f9 117 Gene3D G3DSA:1.10.10.10 11 117 7.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_05890 b78dc0b40bf0feb8f1a5ae37e19eb7f9 117 Pfam PF01022 Bacterial regulatory protein, arsR family 37 82 3.2E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 273 283 1.6E-25 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 149 164 1.6E-25 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 327 339 1.6E-25 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 196 211 1.6E-25 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 308 323 1.6E-25 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 SUPERFAMILY SSF55486 220 463 1.07E-68 T 11-10-2018 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 SUPERFAMILY SSF48371 543 679 6.91E-5 T 11-10-2018 IPR016024 Armadillo-type fold AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 Gene3D G3DSA:1.10.390.60 218 457 8.5E-76 T 11-10-2018 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 Pfam PF11838 ERAP1-like C-terminal domain 522 828 1.4E-26 T 11-10-2018 IPR024571 ERAP1-like C-terminal domain AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 Gene3D G3DSA:1.25.50.20 541 856 1.6E-18 T 11-10-2018 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 Pfam PF01433 Peptidase family M1 domain 224 452 5.5E-67 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 SUPERFAMILY SSF63737 22 213 6.28E-42 T 11-10-2018 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 Gene3D G3DSA:2.60.40.1730 13 214 1.8E-46 T 11-10-2018 AVL55_12235 09e2fd4c060882906f8ac57b63703b0c 857 Gene3D G3DSA:2.60.40.1910 458 536 4.1E-8 T 11-10-2018 AVL55_09770 b3607b84c0da981e2d0d88f3173e45c4 508 Pfam PF11893 Domain of unknown function (DUF3413) 8 256 1.6E-80 T 11-10-2018 IPR024588 Inner membrane protein YejM, N-terminal AVL55_09770 b3607b84c0da981e2d0d88f3173e45c4 508 SUPERFAMILY SSF53649 411 456 3.05E-6 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AVL55_13845 bb941284b91e7b37601d26c863521ebb 274 Gene3D G3DSA:1.10.3130.10 1 66 7.2E-23 T 11-10-2018 AVL55_13845 bb941284b91e7b37601d26c863521ebb 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AVL55_13845 bb941284b91e7b37601d26c863521ebb 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 3.8E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_13845 bb941284b91e7b37601d26c863521ebb 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 150 4.9E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_13845 bb941284b91e7b37601d26c863521ebb 274 Gene3D G3DSA:2.160.10.10 67 190 1.2E-34 T 11-10-2018 AVL55_13845 bb941284b91e7b37601d26c863521ebb 274 SUPERFAMILY SSF51161 3 168 7.07E-54 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_13845 bb941284b91e7b37601d26c863521ebb 274 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 166 7.7E-78 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 Pfam PF00400 WD domain, G-beta repeat 156 188 6.0E-4 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 Pfam PF00400 WD domain, G-beta repeat 235 273 0.057 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 Gene3D G3DSA:2.130.10.10 15 155 5.0E-13 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 SMART SM00320 22 61 3.9 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 SMART SM00320 191 229 0.4 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 SMART SM00320 149 188 1.3E-4 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 SMART SM00320 64 105 27.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 SMART SM00320 232 273 2.8E-4 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 SMART SM00320 108 147 43.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 SMART SM00320 276 322 68.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 SUPERFAMILY SSF50998 25 316 3.22E-52 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AVL55_19480 efae921027e2fb2b12c7bcfc1c06bfcc 325 Gene3D G3DSA:2.130.10.10 156 324 9.5E-33 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 Gene3D G3DSA:2.40.240.10 340 547 1.5E-77 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 51.635 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 Gene3D G3DSA:3.90.800.10 101 209 3.0E-102 T 11-10-2018 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 8.9E-271 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 530 8.3E-59 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.3E-117 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 Gene3D G3DSA:3.40.50.620 28 247 3.0E-102 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 SUPERFAMILY SSF50715 340 548 6.28E-74 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 SUPERFAMILY SSF52374 28 346 5.63E-96 T 11-10-2018 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 3.5E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 3.5E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 3.5E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 3.5E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 Gene3D G3DSA:1.10.1160.10 261 339 7.7E-35 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 AVL55_09685 e5c68da8324b6903f15ff140527e3b7b 555 Gene3D G3DSA:2.40.240.10 348 466 1.5E-77 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AVL55_02025 76402dbbd0375a2bcce579bcc43726da 237 SUPERFAMILY SSF46894 138 233 3.12E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_02025 76402dbbd0375a2bcce579bcc43726da 237 Gene3D G3DSA:1.10.10.10 133 236 1.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_02025 76402dbbd0375a2bcce579bcc43726da 237 SMART SM00862 157 232 1.9E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_02025 76402dbbd0375a2bcce579bcc43726da 237 Pfam PF00072 Response regulator receiver domain 10 120 2.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02025 76402dbbd0375a2bcce579bcc43726da 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 9.6E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_02025 76402dbbd0375a2bcce579bcc43726da 237 SUPERFAMILY SSF52172 9 129 8.11E-41 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_02025 76402dbbd0375a2bcce579bcc43726da 237 SMART SM00448 8 119 2.5E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_02025 76402dbbd0375a2bcce579bcc43726da 237 Gene3D G3DSA:3.40.50.2300 2 128 1.1E-36 T 11-10-2018 AVL55_17195 90e4a30d982fa4e836f6594996e059ea 343 Gene3D G3DSA:3.40.630.10 16 318 2.4E-89 T 11-10-2018 AVL55_17195 90e4a30d982fa4e836f6594996e059ea 343 PIRSF PIRSF039012 4 323 2.5E-88 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AVL55_17195 90e4a30d982fa4e836f6594996e059ea 343 SUPERFAMILY SSF53187 21 316 2.71E-73 T 11-10-2018 AVL55_17195 90e4a30d982fa4e836f6594996e059ea 343 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 46 315 1.5E-58 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AVL55_15885 3d63764af1621414bf805e2e13b67c0a 373 SUPERFAMILY SSF51395 2 362 9.02E-113 T 11-10-2018 AVL55_15885 3d63764af1621414bf805e2e13b67c0a 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 337 1.2E-84 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AVL55_15885 3d63764af1621414bf805e2e13b67c0a 373 Gene3D G3DSA:3.20.20.70 1 372 9.2E-128 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07840 094144600cef3496c4cb559cc13692ca 1252 SUPERFAMILY SSF55486 273 420 2.28E-8 T 11-10-2018 AVL55_07840 094144600cef3496c4cb559cc13692ca 1252 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 271 411 6.1E-6 T 11-10-2018 AVL55_07840 094144600cef3496c4cb559cc13692ca 1252 Gene3D G3DSA:3.40.390.10 318 483 1.8E-6 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AVL55_17020 e455e022d96173b2326e4c132431fab7 82 Gene3D G3DSA:2.30.30.320 2 81 4.3E-28 T 11-10-2018 IPR037135 DUF1653-like domain superfamily AVL55_17020 e455e022d96173b2326e4c132431fab7 82 Pfam PF07866 Protein of unknown function (DUF1653) 11 70 9.5E-28 T 11-10-2018 IPR023387 DUF1653-like domain AVL55_12440 0af32e9e3c0867bd771ca409540c2fe4 285 SUPERFAMILY SSF53335 112 228 1.93E-13 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_12440 0af32e9e3c0867bd771ca409540c2fe4 285 Gene3D G3DSA:3.40.50.150 76 227 5.8E-12 T 11-10-2018 AVL55_12440 0af32e9e3c0867bd771ca409540c2fe4 285 Pfam PF08241 Methyltransferase domain 111 161 5.5E-6 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AVL55_08305 3e89f73320817290f0af8655d482f42d 200 Pfam PF07238 PilZ domain 93 179 3.7E-8 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AVL55_11755 7cb631788c08c33a9d03bf677f974259 81 SUPERFAMILY SSF54862 5 72 3.84E-18 T 11-10-2018 AVL55_11755 7cb631788c08c33a9d03bf677f974259 81 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AVL55_11755 7cb631788c08c33a9d03bf677f974259 81 Gene3D G3DSA:3.30.70.20 2 81 5.8E-31 T 11-10-2018 AVL55_11755 7cb631788c08c33a9d03bf677f974259 81 Pfam PF12838 4Fe-4S dicluster domain 8 57 3.3E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AVL55_19400 8345536bf27b0af5f7de592543399ffb 462 Gene3D G3DSA:3.40.309.10 236 426 3.2E-148 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AVL55_19400 8345536bf27b0af5f7de592543399ffb 462 Gene3D G3DSA:3.40.605.10 3 454 3.2E-148 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_19400 8345536bf27b0af5f7de592543399ffb 462 SUPERFAMILY SSF53720 3 456 4.84E-142 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_19400 8345536bf27b0af5f7de592543399ffb 462 Pfam PF00171 Aldehyde dehydrogenase family 3 454 3.4E-139 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AVL55_19400 8345536bf27b0af5f7de592543399ffb 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AVL55_04900 2783efae1bf5d48b86a9fefe296d336e 407 Gene3D G3DSA:1.20.1330.10 40 245 1.3E-41 T 11-10-2018 AVL55_04900 2783efae1bf5d48b86a9fefe296d336e 407 SUPERFAMILY SSF64518 1 407 9.29E-76 T 11-10-2018 AVL55_04900 2783efae1bf5d48b86a9fefe296d336e 407 Gene3D G3DSA:1.20.1330.10 267 383 1.3E-9 T 11-10-2018 AVL55_04900 2783efae1bf5d48b86a9fefe296d336e 407 Pfam PF00700 Bacterial flagellin C-terminal helical region 327 407 2.2E-8 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_04900 2783efae1bf5d48b86a9fefe296d336e 407 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.4E-27 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_04900 2783efae1bf5d48b86a9fefe296d336e 407 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 407 6.9E-84 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AVL55_04950 a9890d600205f2e9e7691d3a829da6fa 381 SUPERFAMILY SSF53383 2 379 5.12E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_04950 a9890d600205f2e9e7691d3a829da6fa 381 Gene3D G3DSA:3.40.640.10 1 261 2.3E-73 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_04950 a9890d600205f2e9e7691d3a829da6fa 381 Gene3D G3DSA:3.90.1150.10 263 381 5.2E-34 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_04950 a9890d600205f2e9e7691d3a829da6fa 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 376 7.4E-98 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AVL55_04950 a9890d600205f2e9e7691d3a829da6fa 381 PIRSF PIRSF000390 1 381 4.6E-95 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AVL55_04950 a9890d600205f2e9e7691d3a829da6fa 381 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 380 4.3E-152 T 11-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase AVL55_16945 fadacda6bd643ad0c9e0dba4112a5320 566 Gene3D G3DSA:2.30.40.10 62 541 1.9E-141 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_16945 fadacda6bd643ad0c9e0dba4112a5320 566 SUPERFAMILY SSF51556 96 524 4.16E-37 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_16945 fadacda6bd643ad0c9e0dba4112a5320 566 SUPERFAMILY SSF51338 48 565 3.39E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_16945 fadacda6bd643ad0c9e0dba4112a5320 566 Gene3D G3DSA:3.10.310.70 115 232 1.9E-141 T 11-10-2018 AVL55_16945 fadacda6bd643ad0c9e0dba4112a5320 566 Gene3D G3DSA:3.20.20.140 97 523 1.9E-141 T 11-10-2018 AVL55_16945 fadacda6bd643ad0c9e0dba4112a5320 566 Pfam PF07969 Amidohydrolase family 86 564 1.4E-99 T 11-10-2018 IPR013108 Amidohydrolase 3 AVL55_10675 f1356423643e2532a8d937211abd0dbe 512 Gene3D G3DSA:1.10.10.1710 443 512 2.4E-26 T 11-10-2018 AVL55_10675 f1356423643e2532a8d937211abd0dbe 512 Gene3D G3DSA:1.25.40.80 132 318 5.0E-123 T 11-10-2018 AVL55_10675 f1356423643e2532a8d937211abd0dbe 512 Gene3D G3DSA:1.10.579.10 322 442 3.5E-52 T 11-10-2018 AVL55_10675 f1356423643e2532a8d937211abd0dbe 512 Gene3D G3DSA:3.40.50.620 6 229 5.0E-123 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_10675 f1356423643e2532a8d937211abd0dbe 512 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 227 4.6E-81 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AVL55_10675 f1356423643e2532a8d937211abd0dbe 512 SUPERFAMILY SSF48173 229 489 3.14E-59 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AVL55_01430 c57d6da514166f15de5216a8eb303f27 245 Pfam PF05275 Copper resistance protein B precursor (CopB) 33 245 8.0E-72 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.59 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 SUPERFAMILY SSF48179 348 487 2.38E-42 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 Gene3D G3DSA:3.40.50.720 1 208 6.9E-82 T 11-10-2018 AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 3.3E-56 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.1E-115 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 SUPERFAMILY SSF51735 28 209 9.69E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 9.2E-20 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 2.8E-27 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 SUPERFAMILY SSF48179 210 370 3.74E-40 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_19660 2c603e1988e0e755d15d9df6fcbb259c 492 Gene3D G3DSA:1.10.1040.10 209 492 3.9E-114 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 SMART SM00065 51 202 0.0019 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 SMART SM00065 249 401 1.2E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 SUPERFAMILY SSF141868 620 855 3.53E-58 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 Gene3D G3DSA:3.30.70.270 438 618 3.0E-61 T 11-10-2018 AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 Pfam PF00563 EAL domain 621 853 1.5E-58 T 11-10-2018 IPR001633 EAL domain AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 Pfam PF13185 GAF domain 250 392 2.8E-16 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 Pfam PF13185 GAF domain 52 190 1.6E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 SUPERFAMILY SSF55781 233 412 2.84E-22 T 11-10-2018 AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 Gene3D G3DSA:3.30.450.40 26 206 3.5E-18 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 Gene3D G3DSA:3.30.450.40 224 404 1.5E-19 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 SMART SM00267 432 605 2.6E-64 T 11-10-2018 IPR000160 GGDEF domain AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 441 605 2.0E-40 T 11-10-2018 IPR000160 GGDEF domain AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 Pfam PF00990 Diguanylate cyclase, GGDEF domain 443 600 7.4E-50 T 11-10-2018 IPR000160 GGDEF domain AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 SUPERFAMILY SSF55781 17 193 2.62E-18 T 11-10-2018 AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 Gene3D G3DSA:3.20.20.450 619 865 4.4E-63 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 SUPERFAMILY SSF55073 448 607 4.63E-48 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_00360 3ab385223c4d3d2c79bb46b9b016db01 866 SMART SM00052 615 861 6.0E-49 T 11-10-2018 IPR001633 EAL domain AVL55_13075 4d21170ffc2d3bffab0a65f57c992a75 131 SUPERFAMILY SSF161084 3 128 1.44E-29 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AVL55_13075 4d21170ffc2d3bffab0a65f57c992a75 131 Gene3D G3DSA:1.20.120.550 3 130 3.2E-28 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AVL55_13075 4d21170ffc2d3bffab0a65f57c992a75 131 Pfam PF01124 MAPEG family 6 124 3.7E-27 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AVL55_16280 db3d9236cc601d052c462397479e65c7 650 SMART SM00283 388 649 2.1E-56 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_16280 db3d9236cc601d052c462397479e65c7 650 Gene3D G3DSA:3.30.450.20 40 287 2.5E-18 T 11-10-2018 AVL55_16280 db3d9236cc601d052c462397479e65c7 650 Gene3D G3DSA:3.30.450.20 49 184 2.5E-18 T 11-10-2018 AVL55_16280 db3d9236cc601d052c462397479e65c7 650 Pfam PF02743 Cache domain 40 281 1.1E-20 T 11-10-2018 IPR033479 Double Cache domain 1 AVL55_16280 db3d9236cc601d052c462397479e65c7 650 SMART SM00304 319 373 4.4E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_16280 db3d9236cc601d052c462397479e65c7 650 SUPERFAMILY SSF58104 341 650 7.85E-68 T 11-10-2018 AVL55_16280 db3d9236cc601d052c462397479e65c7 650 Gene3D G3DSA:1.10.287.950 319 650 8.3E-64 T 11-10-2018 AVL55_16280 db3d9236cc601d052c462397479e65c7 650 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 616 1.4E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_11790 ec7eb65880b2cc5a7474c96395f5ad54 346 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 330 1.3E-34 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AVL55_11790 ec7eb65880b2cc5a7474c96395f5ad54 346 Gene3D G3DSA:3.20.20.210 1 343 8.4E-132 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AVL55_11790 ec7eb65880b2cc5a7474c96395f5ad54 346 SUPERFAMILY SSF51726 4 339 3.27E-68 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AVL55_11790 ec7eb65880b2cc5a7474c96395f5ad54 346 PIRSF PIRSF005632 1 343 3.9E-192 T 11-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AVL55_16865 a766382f45a9b3320c9497a56754718d 241 Pfam PF00106 short chain dehydrogenase 4 199 2.8E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_16865 a766382f45a9b3320c9497a56754718d 241 Gene3D G3DSA:3.40.50.720 2 241 3.1E-39 T 11-10-2018 AVL55_16865 a766382f45a9b3320c9497a56754718d 241 SUPERFAMILY SSF51735 3 241 1.07E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_16865 a766382f45a9b3320c9497a56754718d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_16865 a766382f45a9b3320c9497a56754718d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_16865 a766382f45a9b3320c9497a56754718d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_16865 a766382f45a9b3320c9497a56754718d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_07540 0fb34093b7b9750da03eb70ae4008054 854 Gene3D G3DSA:2.40.170.20 361 854 3.7E-56 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_07540 0fb34093b7b9750da03eb70ae4008054 854 Pfam PF00593 TonB dependent receptor 341 853 2.6E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_07540 0fb34093b7b9750da03eb70ae4008054 854 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 179 5.8E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_07540 0fb34093b7b9750da03eb70ae4008054 854 Gene3D G3DSA:2.170.130.10 38 183 7.6E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_07540 0fb34093b7b9750da03eb70ae4008054 854 SUPERFAMILY SSF56935 44 854 8.42E-100 T 11-10-2018 AVL55_09775 d55b48108909171566e2f6df48be0d8e 72 Pfam PF07208 Protein of unknown function (DUF1414) 28 69 3.4E-21 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AVL55_09775 d55b48108909171566e2f6df48be0d8e 72 PIRSF PIRSF006188 1 72 7.3E-25 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AVL55_09775 d55b48108909171566e2f6df48be0d8e 72 SUPERFAMILY SSF158651 1 71 1.57E-26 T 11-10-2018 IPR023202 YejL-like superfamily AVL55_09775 d55b48108909171566e2f6df48be0d8e 72 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 4.0E-14 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AVL55_09775 d55b48108909171566e2f6df48be0d8e 72 Gene3D G3DSA:1.10.3390.10 1 72 3.8E-28 T 11-10-2018 IPR023202 YejL-like superfamily AVL55_05745 82307e7dde67670e859c0675352c56a8 387 Gene3D G3DSA:3.40.1350.10 23 111 1.8E-8 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AVL55_05745 82307e7dde67670e859c0675352c56a8 387 Pfam PF14088 Domain of unknown function (DUF4268) 239 372 8.9E-40 T 11-10-2018 IPR025364 Domain of unknown function DUF4268 AVL55_13830 9dcb0becfbe0800f24cb3c638cad4542 388 Pfam PF00266 Aminotransferase class-V 7 371 7.9E-86 T 11-10-2018 IPR000192 Aminotransferase class V domain AVL55_13830 9dcb0becfbe0800f24cb3c638cad4542 388 PIRSF PIRSF005572 4 386 2.7E-133 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AVL55_13830 9dcb0becfbe0800f24cb3c638cad4542 388 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AVL55_13830 9dcb0becfbe0800f24cb3c638cad4542 388 SUPERFAMILY SSF53383 6 378 6.31E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_13830 9dcb0becfbe0800f24cb3c638cad4542 388 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 3 387 49.139 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AVL55_13830 9dcb0becfbe0800f24cb3c638cad4542 388 Gene3D G3DSA:3.40.640.10 18 264 3.0E-160 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_13830 9dcb0becfbe0800f24cb3c638cad4542 388 Gene3D G3DSA:3.90.1150.10 7 376 3.0E-160 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_19240 3c2395aeddb8f67e12791066a894ade4 292 Gene3D G3DSA:3.40.50.150 101 292 3.8E-56 T 11-10-2018 AVL55_19240 3c2395aeddb8f67e12791066a894ade4 292 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 4.8E-99 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AVL55_19240 3c2395aeddb8f67e12791066a894ade4 292 PIRSF PIRSF000401 1 292 1.9E-91 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AVL55_19240 3c2395aeddb8f67e12791066a894ade4 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 2.3E-96 T 11-10-2018 AVL55_19240 3c2395aeddb8f67e12791066a894ade4 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 32.236 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AVL55_19240 3c2395aeddb8f67e12791066a894ade4 292 SUPERFAMILY SSF53335 65 270 3.91E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_19520 a8103c018cec32adc55851704f2f62fd 269 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 10 261 40.655 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AVL55_19520 a8103c018cec32adc55851704f2f62fd 269 Gene3D G3DSA:3.40.50.1820 9 261 1.1E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_19520 a8103c018cec32adc55851704f2f62fd 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 4.0E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_19520 a8103c018cec32adc55851704f2f62fd 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 4.0E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_19520 a8103c018cec32adc55851704f2f62fd 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 4.0E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_19520 a8103c018cec32adc55851704f2f62fd 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 4.0E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_19520 a8103c018cec32adc55851704f2f62fd 269 SUPERFAMILY SSF53474 8 259 2.32E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_19520 a8103c018cec32adc55851704f2f62fd 269 Pfam PF12697 Alpha/beta hydrolase family 21 254 4.0E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_19520 a8103c018cec32adc55851704f2f62fd 269 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 259 4.0E-79 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AVL55_05235 be5f6ae83d3181a5e5303f36ee888cc8 268 SMART SM00260 112 254 2.4E-5 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_05235 be5f6ae83d3181a5e5303f36ee888cc8 268 PIRSF PIRSF020479 4 267 3.2E-82 T 11-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like AVL55_05235 be5f6ae83d3181a5e5303f36ee888cc8 268 Gene3D G3DSA:2.40.50.180 140 253 3.9E-6 T 11-10-2018 AVL55_05235 be5f6ae83d3181a5e5303f36ee888cc8 268 Pfam PF01584 CheW-like domain 123 256 3.2E-15 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_05235 be5f6ae83d3181a5e5303f36ee888cc8 268 SUPERFAMILY SSF50341 122 257 6.8E-17 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AVL55_05235 be5f6ae83d3181a5e5303f36ee888cc8 268 Gene3D G3DSA:2.30.30.40 126 248 3.9E-6 T 11-10-2018 AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 5.0E-36 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 Gene3D G3DSA:1.10.10.10 260 334 1.6E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 SUPERFAMILY SSF52540 23 254 8.22E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 2.4E-147 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 SUPERFAMILY SSF46785 260 331 2.12E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 2.1E-34 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 SMART SM00382 54 181 1.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 Gene3D G3DSA:3.40.50.300 23 184 7.4E-40 T 11-10-2018 AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 3.9E-118 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 Gene3D G3DSA:1.10.8.60 185 258 2.1E-29 T 11-10-2018 AVL55_06815 d701beae131249e1c4a25d4b2974ff2c 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.694 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AVL55_17660 8cbb6f0dd56b282cc8f5009e074bdbe4 457 PIRSF PIRSF006446 1 454 1.4E-170 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AVL55_17660 8cbb6f0dd56b282cc8f5009e074bdbe4 457 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 427 6.7E-153 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AVL55_17770 783f21d84455a92eb2255832f7b496ab 256 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 243 1.4E-16 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AVL55_18000 1da14ce55461e53bbd16d7d5359aca57 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 3.8E-101 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AVL55_18000 1da14ce55461e53bbd16d7d5359aca57 283 Gene3D G3DSA:3.40.50.620 1 179 2.5E-80 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_18000 1da14ce55461e53bbd16d7d5359aca57 283 SUPERFAMILY SSF52374 1 281 5.9E-106 T 11-10-2018 AVL55_18000 1da14ce55461e53bbd16d7d5359aca57 283 Pfam PF02569 Pantoate-beta-alanine ligase 2 278 1.2E-104 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AVL55_18000 1da14ce55461e53bbd16d7d5359aca57 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.505 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AVL55_18000 1da14ce55461e53bbd16d7d5359aca57 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 67 1.7E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AVL55_18000 1da14ce55461e53bbd16d7d5359aca57 283 Gene3D G3DSA:3.30.1300.10 181 282 1.7E-27 T 11-10-2018 AVL55_02010 4bc82cc2886fa90f041443491287178b 337 SUPERFAMILY SSF51735 2 183 3.37E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_02010 4bc82cc2886fa90f041443491287178b 337 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 335 4.6E-111 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AVL55_02010 4bc82cc2886fa90f041443491287178b 337 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 150 166 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AVL55_02010 4bc82cc2886fa90f041443491287178b 337 Gene3D G3DSA:3.30.360.10 154 314 5.1E-111 T 11-10-2018 AVL55_02010 4bc82cc2886fa90f041443491287178b 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 313 7.7E-9 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AVL55_02010 4bc82cc2886fa90f041443491287178b 337 SUPERFAMILY SSF55347 155 310 7.19E-47 T 11-10-2018 AVL55_02010 4bc82cc2886fa90f041443491287178b 337 Gene3D G3DSA:3.40.50.720 6 327 5.1E-111 T 11-10-2018 AVL55_02010 4bc82cc2886fa90f041443491287178b 337 SMART SM00859 3 147 1.0E-41 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AVL55_02010 4bc82cc2886fa90f041443491287178b 337 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 336 36.013 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AVL55_02010 4bc82cc2886fa90f041443491287178b 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 147 2.3E-26 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AVL55_16940 a990a109ee501fa78d83fe5389a2b17a 346 Gene3D G3DSA:3.40.50.1100 53 149 4.2E-93 T 11-10-2018 AVL55_16940 a990a109ee501fa78d83fe5389a2b17a 346 SUPERFAMILY SSF53686 6 312 4.06E-79 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AVL55_16940 a990a109ee501fa78d83fe5389a2b17a 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 307 3.0E-65 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AVL55_16940 a990a109ee501fa78d83fe5389a2b17a 346 Gene3D G3DSA:3.40.50.1100 10 311 4.2E-93 T 11-10-2018 AVL55_11765 737602d37c9f54327518309fca91417c 391 Gene3D G3DSA:3.40.50.720 8 176 2.0E-36 T 11-10-2018 AVL55_11765 737602d37c9f54327518309fca91417c 391 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 9 137 2.6E-15 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AVL55_11765 737602d37c9f54327518309fca91417c 391 SUPERFAMILY SSF51735 9 162 3.97E-13 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_19230 8c478199d139148168b298914b75f875 539 Gene3D G3DSA:3.90.1300.10 8 516 9.9E-157 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AVL55_19230 8c478199d139148168b298914b75f875 539 Pfam PF01425 Amidase 51 500 2.0E-97 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AVL55_19230 8c478199d139148168b298914b75f875 539 SUPERFAMILY SSF75304 30 516 3.79E-117 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AVL55_16170 905753bd641c7c30fb52c2881506f6c0 438 Pfam PF07804 HipA-like C-terminal domain 174 411 9.1E-47 T 11-10-2018 IPR012893 HipA-like, C-terminal AVL55_16170 905753bd641c7c30fb52c2881506f6c0 438 Pfam PF13657 HipA N-terminal domain 8 117 6.2E-21 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AVL55_12055 0b6802b14f4c7a842a848327e57b3147 97 Pfam PF07023 Protein of unknown function (DUF1315) 5 84 5.5E-28 T 11-10-2018 IPR009749 Protein of unknown function DUF1315 AVL55_04395 7194e0ef5d36284d72daf167a9d1078b 433 Pfam PF16537 Type II secretion system protein B 370 428 1.1E-22 T 11-10-2018 IPR032389 Type II secretion system protein B AVL55_04395 7194e0ef5d36284d72daf167a9d1078b 433 Pfam PF11871 Domain of unknown function (DUF3391) 5 74 1.8E-8 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 AVL55_18480 efde0aa5ba541b191208ddb34328788b 133 Pfam PF13430 Domain of unknown function (DUF4112) 11 110 7.7E-33 T 11-10-2018 IPR025187 Protein of unknown function DUF4112 AVL55_06520 bf6ec5153bc1a89cf66fdfdb41848f4c 304 Gene3D G3DSA:3.40.50.620 9 213 6.4E-63 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_06520 bf6ec5153bc1a89cf66fdfdb41848f4c 304 PIRSF PIRSF002936 2 304 4.8E-153 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AVL55_06520 bf6ec5153bc1a89cf66fdfdb41848f4c 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 6.6E-156 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AVL55_06520 bf6ec5153bc1a89cf66fdfdb41848f4c 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 56.687 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AVL55_06520 bf6ec5153bc1a89cf66fdfdb41848f4c 304 SUPERFAMILY SSF52402 8 211 8.38E-70 T 11-10-2018 AVL55_06520 bf6ec5153bc1a89cf66fdfdb41848f4c 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 9.9E-60 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AVL55_03610 432192ea07b61450e5b6c860f1a7d1d1 85 SUPERFAMILY SSF82657 2 80 1.83E-27 T 11-10-2018 IPR036065 BolA-like superfamily AVL55_03610 432192ea07b61450e5b6c860f1a7d1d1 85 Gene3D G3DSA:3.30.300.90 1 84 1.6E-30 T 11-10-2018 AVL55_03610 432192ea07b61450e5b6c860f1a7d1d1 85 Pfam PF01722 BolA-like protein 12 71 7.5E-16 T 11-10-2018 IPR002634 BolA protein AVL55_03610 432192ea07b61450e5b6c860f1a7d1d1 85 PIRSF PIRSF003113 1 85 4.5E-23 T 11-10-2018 IPR002634 BolA protein AVL55_07110 1664c26bb723de216db1aafcf8511278 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 69 2.0E-20 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AVL55_07110 1664c26bb723de216db1aafcf8511278 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 67 7.9E-29 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AVL55_00890 d7c638fde7e578967c2dadbffa3bca83 150 Pfam PF11736 Protein of unknown function (DUF3299) 23 148 3.8E-42 T 11-10-2018 IPR021727 Protein of unknown function DUF3299 AVL55_00890 d7c638fde7e578967c2dadbffa3bca83 150 Gene3D G3DSA:2.40.50.870 16 150 1.5E-46 T 11-10-2018 AVL55_10175 51e40d5f5c9423b60f44325cfd31e125 288 SUPERFAMILY SSF46689 15 114 3.76E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_10175 51e40d5f5c9423b60f44325cfd31e125 288 Pfam PF00665 Integrase core domain 137 252 4.5E-11 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AVL55_10175 51e40d5f5c9423b60f44325cfd31e125 288 SUPERFAMILY SSF53098 132 261 4.25E-18 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_10175 51e40d5f5c9423b60f44325cfd31e125 288 Pfam PF13384 Homeodomain-like domain 15 53 1.4E-5 T 11-10-2018 AVL55_10175 51e40d5f5c9423b60f44325cfd31e125 288 Gene3D G3DSA:3.30.420.10 127 270 2.4E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_07235 5b8ea25efd75e8ff2c317ee4230aad4d 443 Gene3D G3DSA:3.30.565.10 298 443 5.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_07235 5b8ea25efd75e8ff2c317ee4230aad4d 443 SUPERFAMILY SSF55874 302 440 1.83E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_07235 5b8ea25efd75e8ff2c317ee4230aad4d 443 SMART SM00387 337 443 6.7E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_07235 5b8ea25efd75e8ff2c317ee4230aad4d 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 440 1.2E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_07235 5b8ea25efd75e8ff2c317ee4230aad4d 443 Gene3D G3DSA:1.10.287.130 195 292 3.8E-6 T 11-10-2018 AVL55_07235 5b8ea25efd75e8ff2c317ee4230aad4d 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.5E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_07235 5b8ea25efd75e8ff2c317ee4230aad4d 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.5E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_17235 2382d100bcffc957cd871ebdeb20bfef 575 SUPERFAMILY SSF90123 11 324 1.96E-37 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_17235 2382d100bcffc957cd871ebdeb20bfef 575 Gene3D G3DSA:1.20.1560.10 3 324 8.1E-29 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AVL55_17235 2382d100bcffc957cd871ebdeb20bfef 575 Pfam PF00664 ABC transporter transmembrane region 29 294 2.0E-13 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AVL55_17235 2382d100bcffc957cd871ebdeb20bfef 575 SUPERFAMILY SSF52540 377 521 1.16E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17235 2382d100bcffc957cd871ebdeb20bfef 575 Gene3D G3DSA:3.40.50.300 325 545 2.4E-14 T 11-10-2018 AVL55_05245 6165f922992e97d6ac1dd441cd5e3ff9 144 Pfam PF10975 Protein of unknown function (DUF2802) 77 141 2.7E-20 T 11-10-2018 IPR021244 Protein of unknown function DUF2802 AVL55_05330 4c4ef5d93a9e650c86221f4024845781 63 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 62 16.747 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AVL55_05330 4c4ef5d93a9e650c86221f4024845781 63 SUPERFAMILY SSF117130 1 54 7.72E-21 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AVL55_05330 4c4ef5d93a9e650c86221f4024845781 63 Gene3D G3DSA:3.30.70.1680 1 59 1.3E-29 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AVL55_05330 4c4ef5d93a9e650c86221f4024845781 63 Pfam PF02599 Global regulator protein family 1 52 3.5E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AVL55_05330 4c4ef5d93a9e650c86221f4024845781 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-11 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AVL55_05330 4c4ef5d93a9e650c86221f4024845781 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 2.4E-29 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 Gene3D G3DSA:3.30.420.10 1 194 3.8E-65 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 SMART SM00341 210 290 2.0E-11 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 TIGRFAM TIGR01388 rnd: ribonuclease D 5 377 3.1E-113 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 Gene3D G3DSA:1.10.150.80 299 384 1.3E-23 T 11-10-2018 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 SMART SM00474 3 171 1.5E-39 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 Hamap MF_01899 Ribonuclease D [rnd]. 3 380 39.443 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 Pfam PF01612 3'-5' exonuclease 3 170 9.0E-39 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 Pfam PF00570 HRDC domain 213 280 1.7E-15 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 SUPERFAMILY SSF47819 300 380 1.5E-14 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 Gene3D G3DSA:1.10.150.80 195 293 5.8E-21 T 11-10-2018 AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 SUPERFAMILY SSF53098 1 210 1.18E-64 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_12895 532de39aac00bb68142a1573e9e8c409 385 SUPERFAMILY SSF47819 193 290 5.01E-25 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AVL55_12905 1b2cec6ad5a6b407cd786e519a8b4b88 279 Pfam PF00561 alpha/beta hydrolase fold 24 132 3.2E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_12905 1b2cec6ad5a6b407cd786e519a8b4b88 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 7.9E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_12905 1b2cec6ad5a6b407cd786e519a8b4b88 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 7.9E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_12905 1b2cec6ad5a6b407cd786e519a8b4b88 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 7.9E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_12905 1b2cec6ad5a6b407cd786e519a8b4b88 279 Gene3D G3DSA:3.40.50.1820 5 272 1.8E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_12905 1b2cec6ad5a6b407cd786e519a8b4b88 279 SUPERFAMILY SSF53474 20 278 8.58E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_01510 7f9e57f33009e4027da6d791187c46aa 205 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 42 188 3.0E-30 T 11-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 AVL55_17285 f49c6243ae38ba88860d8fe9d64d4f20 181 SUPERFAMILY SSF51182 1 178 6.48E-77 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_17285 f49c6243ae38ba88860d8fe9d64d4f20 181 Gene3D G3DSA:2.60.120.10 1 180 1.1E-73 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_17285 f49c6243ae38ba88860d8fe9d64d4f20 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 174 1.3E-73 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AVL55_17285 f49c6243ae38ba88860d8fe9d64d4f20 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 177 1.3E-82 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AVL55_17285 f49c6243ae38ba88860d8fe9d64d4f20 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 178 2.0E-69 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AVL55_13435 4ed748e7ebe170a97d787c3463052983 153 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 143 3.9E-27 T 11-10-2018 AVL55_13435 4ed748e7ebe170a97d787c3463052983 153 PIRSF PIRSF004923 1 152 2.9E-35 T 11-10-2018 IPR026268 Protein RseC AVL55_02530 e5e171553094991af15f046468764a89 687 Pfam PF14718 Soluble lytic murein transglycosylase L domain 435 501 3.0E-18 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AVL55_02530 e5e171553094991af15f046468764a89 687 SUPERFAMILY SSF48435 55 506 2.48E-106 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AVL55_02530 e5e171553094991af15f046468764a89 687 Gene3D G3DSA:1.25.20.10 52 416 1.5E-95 T 11-10-2018 AVL55_02530 e5e171553094991af15f046468764a89 687 SUPERFAMILY SSF53955 509 661 6.26E-42 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AVL55_02530 e5e171553094991af15f046468764a89 687 Gene3D G3DSA:1.10.530.10 502 663 3.5E-44 T 11-10-2018 AVL55_02530 e5e171553094991af15f046468764a89 687 Pfam PF01464 Transglycosylase SLT domain 512 618 4.1E-26 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AVL55_19555 0df69dfb1c884718de78edb002bd850a 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 416 2.1E-73 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_19555 0df69dfb1c884718de78edb002bd850a 448 Pfam PF01554 MatE 24 185 9.3E-15 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_19555 0df69dfb1c884718de78edb002bd850a 448 Pfam PF01554 MatE 248 405 2.2E-13 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_00710 870ed69b4ca1db3eede2100555ec03ff 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 369 2.2E-74 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_00710 870ed69b4ca1db3eede2100555ec03ff 381 Gene3D G3DSA:1.10.287.470 99 172 1.7E-71 T 11-10-2018 AVL55_00710 870ed69b4ca1db3eede2100555ec03ff 381 Gene3D G3DSA:2.40.50.100 64 208 1.7E-71 T 11-10-2018 AVL55_00710 870ed69b4ca1db3eede2100555ec03ff 381 Gene3D G3DSA:2.40.420.20 281 371 2.1E-22 T 11-10-2018 AVL55_00710 870ed69b4ca1db3eede2100555ec03ff 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 289 2.6E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_00710 870ed69b4ca1db3eede2100555ec03ff 381 Gene3D G3DSA:2.40.30.170 58 280 1.7E-71 T 11-10-2018 AVL55_00710 870ed69b4ca1db3eede2100555ec03ff 381 SUPERFAMILY SSF111369 55 293 1.7E-72 T 11-10-2018 AVL55_13705 07b5c5e6052ed0de80a7783f7f6fc361 280 Gene3D G3DSA:3.60.15.10 2 277 7.9E-38 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_13705 07b5c5e6052ed0de80a7783f7f6fc361 280 SUPERFAMILY SSF56281 1 254 5.37E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_13705 07b5c5e6052ed0de80a7783f7f6fc361 280 Pfam PF12706 Beta-lactamase superfamily domain 39 236 6.4E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_15645 62209993483f4dd6bc3afdc4af0374dc 376 PIRSF PIRSF038941 2 376 3.4E-160 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AVL55_15645 62209993483f4dd6bc3afdc4af0374dc 376 Gene3D G3DSA:2.40.37.10 10 371 6.8E-153 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AVL55_15645 62209993483f4dd6bc3afdc4af0374dc 376 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 159 332 8.1E-9 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AVL55_15645 62209993483f4dd6bc3afdc4af0374dc 376 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 10 374 6.9E-158 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AVL55_15645 62209993483f4dd6bc3afdc4af0374dc 376 SUPERFAMILY SSF50621 212 366 1.86E-31 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AVL55_15645 62209993483f4dd6bc3afdc4af0374dc 376 Gene3D G3DSA:3.20.20.10 19 244 6.8E-153 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_15645 62209993483f4dd6bc3afdc4af0374dc 376 SUPERFAMILY SSF51419 19 247 2.4E-42 T 11-10-2018 IPR029066 PLP-binding barrel AVL55_17780 cf32fd814a4d1ad61941feceb4e05b6a 316 Gene3D G3DSA:3.40.50.410 141 314 7.5E-9 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_17780 cf32fd814a4d1ad61941feceb4e05b6a 316 SUPERFAMILY SSF53300 148 310 1.39E-8 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_07020 3f466830b3980dc8f0fe37536eb16532 424 Pfam PF11814 Peptidase_C39 like family 219 421 2.1E-83 T 11-10-2018 IPR021770 Protein of unknown function DUF3335 AVL55_07020 3f466830b3980dc8f0fe37536eb16532 424 Pfam PF00583 Acetyltransferase (GNAT) family 63 185 1.6E-12 T 11-10-2018 IPR000182 GNAT domain AVL55_07020 3f466830b3980dc8f0fe37536eb16532 424 Gene3D G3DSA:3.40.630.30 47 213 5.1E-29 T 11-10-2018 AVL55_07020 3f466830b3980dc8f0fe37536eb16532 424 SUPERFAMILY SSF55729 48 208 1.22E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_18730 a8c293b167d3042aa3d0282c86bba8ef 201 Pfam PF11845 Protein of unknown function (DUF3365) 20 198 7.7E-25 T 11-10-2018 IPR021796 Protein of unknown function DUF3365 AVL55_08385 eb257108c36a00c521f8eb13aaba52e9 384 SUPERFAMILY SSF103473 26 379 3.14E-17 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_08385 eb257108c36a00c521f8eb13aaba52e9 384 Gene3D G3DSA:1.20.1250.20 215 384 2.4E-10 T 11-10-2018 AVL55_08385 eb257108c36a00c521f8eb13aaba52e9 384 Pfam PF07690 Major Facilitator Superfamily 35 341 1.5E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_19990 6c9e5ec44841843921fa5e2c578408a8 137 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 6.0E-32 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_19990 6c9e5ec44841843921fa5e2c578408a8 137 Gene3D G3DSA:1.20.5.440 91 133 8.2E-15 T 11-10-2018 AVL55_19990 6c9e5ec44841843921fa5e2c578408a8 137 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 132 8.6E-10 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AVL55_19990 6c9e5ec44841843921fa5e2c578408a8 137 SUPERFAMILY SSF51344 3 86 4.84E-25 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_19990 6c9e5ec44841843921fa5e2c578408a8 137 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.2E-29 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_19990 6c9e5ec44841843921fa5e2c578408a8 137 SUPERFAMILY SSF46604 88 137 2.88E-14 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_19990 6c9e5ec44841843921fa5e2c578408a8 137 Gene3D G3DSA:2.60.15.10 3 90 3.2E-32 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_19990 6c9e5ec44841843921fa5e2c578408a8 137 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 132 4.7E-46 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_19990 6c9e5ec44841843921fa5e2c578408a8 137 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.156 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AVL55_16880 a67d9ee4dda30dd3386d06fe41247ee7 373 SUPERFAMILY SSF50956 49 318 4.71E-11 T 11-10-2018 AVL55_09100 feeff6191dde7812940c1619bf003336 180 Pfam PF00849 RNA pseudouridylate synthase 7 151 4.9E-18 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_09100 feeff6191dde7812940c1619bf003336 180 Gene3D G3DSA:3.30.70.1560 71 170 1.9E-41 T 11-10-2018 AVL55_09100 feeff6191dde7812940c1619bf003336 180 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 42 56 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AVL55_09100 feeff6191dde7812940c1619bf003336 180 Gene3D G3DSA:3.30.70.580 1 70 9.1E-28 T 11-10-2018 AVL55_09100 feeff6191dde7812940c1619bf003336 180 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 11 177 6.3E-56 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AVL55_09100 feeff6191dde7812940c1619bf003336 180 SUPERFAMILY SSF55120 6 177 2.08E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_20055 48de1b38b99ea38424807f6ca567abdc 275 Gene3D G3DSA:3.40.50.300 47 237 1.2E-23 T 11-10-2018 AVL55_20055 48de1b38b99ea38424807f6ca567abdc 275 Pfam PF01695 IstB-like ATP binding protein 106 226 3.3E-10 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AVL55_20055 48de1b38b99ea38424807f6ca567abdc 275 SUPERFAMILY SSF52540 63 228 9.4E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_04955 4193839c24341b5b7a951e0fbc6f9260 234 SUPERFAMILY SSF53448 3 225 3.75E-51 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_04955 4193839c24341b5b7a951e0fbc6f9260 234 Gene3D G3DSA:3.90.550.10 2 230 9.0E-59 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_04955 4193839c24341b5b7a951e0fbc6f9260 234 Pfam PF02348 Cytidylyltransferase 3 177 1.5E-30 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AVL55_04955 4193839c24341b5b7a951e0fbc6f9260 234 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 225 4.5E-95 T 11-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 AVL55_07635 c51e0dc6a57b44060fd7fd06e1553bb3 208 SUPERFAMILY SSF89392 17 207 1.02E-32 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AVL55_07635 c51e0dc6a57b44060fd7fd06e1553bb3 208 Gene3D G3DSA:2.50.20.10 23 208 6.6E-43 T 11-10-2018 AVL55_07635 c51e0dc6a57b44060fd7fd06e1553bb3 208 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 208 20.179 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AVL55_07635 c51e0dc6a57b44060fd7fd06e1553bb3 208 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 2 207 2.8E-31 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AVL55_07635 c51e0dc6a57b44060fd7fd06e1553bb3 208 Pfam PF03550 Outer membrane lipoprotein LolB 43 206 3.5E-35 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AVL55_19755 2c97783d7fd1b5df240c2f50935026cf 194 Pfam PF06938 Protein of unknown function (DUF1285) 36 187 2.5E-46 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 AVL55_19755 2c97783d7fd1b5df240c2f50935026cf 194 Gene3D G3DSA:3.10.540.10 2 86 1.3E-33 T 11-10-2018 AVL55_19755 2c97783d7fd1b5df240c2f50935026cf 194 Gene3D G3DSA:2.30.270.10 87 163 1.3E-11 T 11-10-2018 IPR023361 DUF1285, beta-roll domain superfamily AVL55_19755 2c97783d7fd1b5df240c2f50935026cf 194 PIRSF PIRSF029557 2 194 1.7E-55 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 AVL55_02890 0017cc6b367684d4c0c073e203446f3e 322 SUPERFAMILY SSF55681 11 317 2.49E-75 T 11-10-2018 AVL55_02890 0017cc6b367684d4c0c073e203446f3e 322 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 317 6.8E-124 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AVL55_02890 0017cc6b367684d4c0c073e203446f3e 322 Gene3D G3DSA:3.30.930.10 2 322 2.8E-103 T 11-10-2018 AVL55_02890 0017cc6b367684d4c0c073e203446f3e 322 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 318 6.2E-38 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_12310 43f3bf78109d0a9ec2a03e8ada844f8a 148 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 25 133 1.0E-40 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AVL55_12310 43f3bf78109d0a9ec2a03e8ada844f8a 148 Pfam PF03203 MerC mercury resistance protein 14 124 3.2E-12 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AVL55_12560 7386fb6e4c4d2928d2b6318b7a87dbf0 443 SUPERFAMILY SSF53244 309 440 1.47E-26 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_12560 7386fb6e4c4d2928d2b6318b7a87dbf0 443 TIGRFAM TIGR01499 folC: bifunctional protein FolC 47 440 2.7E-95 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AVL55_12560 7386fb6e4c4d2928d2b6318b7a87dbf0 443 PIRSF PIRSF001563 20 443 3.0E-98 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AVL55_12560 7386fb6e4c4d2928d2b6318b7a87dbf0 443 SUPERFAMILY SSF53623 26 306 4.43E-79 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_12560 7386fb6e4c4d2928d2b6318b7a87dbf0 443 Gene3D G3DSA:3.40.1190.10 14 309 2.2E-87 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AVL55_12560 7386fb6e4c4d2928d2b6318b7a87dbf0 443 Gene3D G3DSA:3.90.190.20 310 443 6.7E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AVL55_12560 7386fb6e4c4d2928d2b6318b7a87dbf0 443 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 164 179 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AVL55_12560 7386fb6e4c4d2928d2b6318b7a87dbf0 443 Pfam PF08245 Mur ligase middle domain 69 216 1.6E-11 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AVL55_00655 5ed6d65bb3338556f8f2e4f64d73cfca 205 SUPERFAMILY SSF161111 13 194 3.66E-34 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_00655 5ed6d65bb3338556f8f2e4f64d73cfca 205 Gene3D G3DSA:1.20.1510.10 15 195 5.9E-11 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_00655 5ed6d65bb3338556f8f2e4f64d73cfca 205 Pfam PF01545 Cation efflux family 23 190 4.6E-14 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AVL55_04075 d5e5373ae802f696d162d38a34f311a3 200 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AVL55_04075 d5e5373ae802f696d162d38a34f311a3 200 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 190 7.4E-56 T 11-10-2018 IPR015796 Impact family, bacterial/archaeal AVL55_04075 d5e5373ae802f696d162d38a34f311a3 200 Gene3D G3DSA:3.30.230.30 1 133 2.6E-51 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily AVL55_04075 d5e5373ae802f696d162d38a34f311a3 200 Pfam PF01205 Uncharacterized protein family UPF0029 17 124 2.5E-31 T 11-10-2018 IPR001498 Impact, N-terminal AVL55_04075 d5e5373ae802f696d162d38a34f311a3 200 SUPERFAMILY SSF54980 137 189 1.29E-8 T 11-10-2018 IPR035647 EF-G domain III/V-like AVL55_04075 d5e5373ae802f696d162d38a34f311a3 200 Pfam PF09186 Domain of unknown function (DUF1949) 140 189 5.8E-7 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AVL55_04075 d5e5373ae802f696d162d38a34f311a3 200 SUPERFAMILY SSF54211 2 130 6.83E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_15685 8f279954045ed86f86fb31b6f9447578 191 Pfam PF04972 BON domain 60 114 8.4E-12 T 11-10-2018 IPR007055 BON domain AVL55_15685 8f279954045ed86f86fb31b6f9447578 191 Pfam PF04972 BON domain 124 190 3.0E-12 T 11-10-2018 IPR007055 BON domain AVL55_08615 2c30ce873689168f6bf7de7bea516373 154 SUPERFAMILY SSF55729 1 149 4.63E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_08615 2c30ce873689168f6bf7de7bea516373 154 Gene3D G3DSA:3.40.630.30 1 149 1.5E-45 T 11-10-2018 AVL55_08615 2c30ce873689168f6bf7de7bea516373 154 Pfam PF13673 Acetyltransferase (GNAT) domain 37 148 6.5E-18 T 11-10-2018 IPR000182 GNAT domain AVL55_02300 76e28253e3e1806b85b7debfe655aae0 468 Gene3D G3DSA:3.40.605.10 26 440 4.4E-173 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AVL55_02300 76e28253e3e1806b85b7debfe655aae0 468 Pfam PF00171 Aldehyde dehydrogenase family 25 440 6.9E-79 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AVL55_02300 76e28253e3e1806b85b7debfe655aae0 468 PIRSF PIRSF036492 6 468 6.6E-189 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AVL55_02300 76e28253e3e1806b85b7debfe655aae0 468 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 221 228 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AVL55_02300 76e28253e3e1806b85b7debfe655aae0 468 Gene3D G3DSA:3.40.309.10 225 420 4.4E-173 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AVL55_02300 76e28253e3e1806b85b7debfe655aae0 468 SUPERFAMILY SSF53720 22 455 8.64E-116 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_11775 91ed64e8b8b1574c0ae2dc6ba02ca180 87 Pfam PF07498 Rho termination factor, N-terminal domain 58 84 7.4E-8 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AVL55_11775 91ed64e8b8b1574c0ae2dc6ba02ca180 87 SUPERFAMILY SSF68912 52 84 3.77E-5 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AVL55_00560 d90191b6305382081687b2fc5182548f 213 Gene3D G3DSA:3.40.50.300 10 188 1.3E-70 T 11-10-2018 AVL55_00560 d90191b6305382081687b2fc5182548f 213 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 189 7.5E-74 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AVL55_00560 d90191b6305382081687b2fc5182548f 213 Pfam PF00625 Guanylate kinase 8 190 5.2E-59 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AVL55_00560 d90191b6305382081687b2fc5182548f 213 SUPERFAMILY SSF52540 6 194 1.19E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00560 d90191b6305382081687b2fc5182548f 213 Hamap MF_00328 Guanylate kinase [gmk]. 4 192 37.059 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AVL55_00560 d90191b6305382081687b2fc5182548f 213 SMART SM00072 5 192 5.0E-70 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AVL55_00560 d90191b6305382081687b2fc5182548f 213 Gene3D G3DSA:3.30.63.10 42 101 1.3E-70 T 11-10-2018 AVL55_00560 d90191b6305382081687b2fc5182548f 213 ProSitePatterns PS00856 Guanylate kinase-like signature. 45 62 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AVL55_03435 d33f12a6211e3c6d2f5e8aae53f0a07f 504 Pfam PF00501 AMP-binding enzyme 8 373 2.9E-52 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AVL55_03435 d33f12a6211e3c6d2f5e8aae53f0a07f 504 Gene3D G3DSA:3.40.50.12780 1 367 7.0E-62 T 11-10-2018 AVL55_03435 d33f12a6211e3c6d2f5e8aae53f0a07f 504 SUPERFAMILY SSF56801 6 480 5.63E-76 T 11-10-2018 AVL55_03435 d33f12a6211e3c6d2f5e8aae53f0a07f 504 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 11-10-2018 IPR020845 AMP-binding, conserved site AVL55_05900 de88e3c64b7acec858cfe010ff776aa4 342 Gene3D G3DSA:1.20.1510.10 22 217 8.3E-43 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_05900 de88e3c64b7acec858cfe010ff776aa4 342 SUPERFAMILY SSF160240 224 295 4.58E-5 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AVL55_05900 de88e3c64b7acec858cfe010ff776aa4 342 SUPERFAMILY SSF161111 22 218 1.31E-56 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_05900 de88e3c64b7acec858cfe010ff776aa4 342 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 295 1.2E-82 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AVL55_05900 de88e3c64b7acec858cfe010ff776aa4 342 Pfam PF01545 Cation efflux family 27 217 1.5E-45 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AVL55_16120 c614983d2360d3a79bac9e6bf4b599e2 356 SUPERFAMILY SSF81901 104 223 4.97E-5 T 11-10-2018 AVL55_14875 bead55b69bddb938893a5f21939f8836 394 Gene3D G3DSA:3.60.15.10 9 194 4.1E-11 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_14875 bead55b69bddb938893a5f21939f8836 394 Gene3D G3DSA:3.60.15.10 238 374 4.9E-13 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_14875 bead55b69bddb938893a5f21939f8836 394 Pfam PF00753 Metallo-beta-lactamase superfamily 22 85 2.0E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_14875 bead55b69bddb938893a5f21939f8836 394 SUPERFAMILY SSF56281 13 353 9.21E-14 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_11875 7df389b39ff543e0f59d40077287b3e9 457 Gene3D G3DSA:3.40.50.300 4 211 4.1E-20 T 11-10-2018 AVL55_11875 7df389b39ff543e0f59d40077287b3e9 457 Pfam PF13245 AAA domain 6 194 2.6E-13 T 11-10-2018 AVL55_11875 7df389b39ff543e0f59d40077287b3e9 457 Pfam PF13087 AAA domain 292 429 1.8E-6 T 11-10-2018 AVL55_11875 7df389b39ff543e0f59d40077287b3e9 457 SUPERFAMILY SSF52540 6 434 1.34E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11875 7df389b39ff543e0f59d40077287b3e9 457 Gene3D G3DSA:3.40.50.300 224 451 1.2E-10 T 11-10-2018 AVL55_05255 d84e45f09bd469abd8eaa6b1f3773494 355 Gene3D G3DSA:3.20.20.330 6 344 4.0E-129 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AVL55_05255 d84e45f09bd469abd8eaa6b1f3773494 355 SUPERFAMILY SSF82282 12 354 4.71E-105 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AVL55_05255 d84e45f09bd469abd8eaa6b1f3773494 355 Pfam PF02574 Homocysteine S-methyltransferase 22 330 3.7E-83 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AVL55_03130 f86f8151d27ab170d8ac3a1811ec6459 438 Gene3D G3DSA:3.40.720.10 59 424 1.9E-103 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AVL55_03130 f86f8151d27ab170d8ac3a1811ec6459 438 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 59 377 2.2E-60 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AVL55_03130 f86f8151d27ab170d8ac3a1811ec6459 438 Gene3D G3DSA:3.30.1360.180 274 375 1.9E-103 T 11-10-2018 AVL55_03130 f86f8151d27ab170d8ac3a1811ec6459 438 SUPERFAMILY SSF53649 53 418 7.2E-77 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 SUPERFAMILY SSF75620 2 299 9.16E-128 T 11-10-2018 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 298 2.2E-152 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 300 33.124 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 SMART SM00937 20 130 1.1E-58 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 Gene3D G3DSA:3.30.70.1660 65 293 1.7E-97 T 11-10-2018 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 Pfam PF03462 PCRF domain 1 154 7.9E-49 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 Pfam PF00472 RF-1 domain 163 272 9.9E-43 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 Gene3D G3DSA:3.30.160.20 161 256 1.7E-97 T 11-10-2018 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 180 196 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AVL55_06245 b63d107568816efdfd73cf295ea5c98b 300 Gene3D G3DSA:1.20.58.410 1 51 3.4E-9 T 11-10-2018 AVL55_01330 7b71b008a41321ae9568b632cd221439 238 Pfam PF09335 SNARE associated Golgi protein 63 178 1.4E-17 T 11-10-2018 IPR032816 SNARE associated Golgi protein AVL55_19885 8db686b4337a0638d4a307675062c5fd 125 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.2E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_19885 8db686b4337a0638d4a307675062c5fd 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.3E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_19885 8db686b4337a0638d4a307675062c5fd 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.3E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_19885 8db686b4337a0638d4a307675062c5fd 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.3E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_19885 8db686b4337a0638d4a307675062c5fd 125 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_19885 8db686b4337a0638d4a307675062c5fd 125 SUPERFAMILY SSF46955 3 124 1.32E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_19885 8db686b4337a0638d4a307675062c5fd 125 Gene3D G3DSA:1.10.1660.10 1 123 9.2E-30 T 11-10-2018 AVL55_19885 8db686b4337a0638d4a307675062c5fd 125 SMART SM00422 3 71 1.3E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 Pfam PF02225 PA domain 438 530 1.5E-11 T 11-10-2018 IPR003137 PA domain AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 268 278 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 608 618 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 Pfam PF05922 Peptidase inhibitor I9 93 164 1.0E-6 T 11-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 Gene3D G3DSA:3.50.30.30 403 554 1.1E-100 T 11-10-2018 AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 196 207 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 Gene3D G3DSA:2.60.40.10 1212 1302 2.2E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 Gene3D G3DSA:3.40.50.200 193 678 1.1E-100 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 Pfam PF00082 Subtilase family 191 664 1.3E-47 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 SUPERFAMILY SSF52743 100 679 7.86E-65 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 1297 1317 3.5E-5 T 11-10-2018 IPR020008 GlyGly-CTERM domain AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 SUPERFAMILY SSF52025 435 497 4.45E-9 T 11-10-2018 AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 PRINTS PR00723 Subtilisin serine protease family (S8) signature 191 210 1.8E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 PRINTS PR00723 Subtilisin serine protease family (S8) signature 264 277 1.8E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 PRINTS PR00723 Subtilisin serine protease family (S8) signature 607 623 1.8E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_10010 dbfaff0ce5c0391b91531e472265e8b5 1321 PIRSF PIRSF037898 1 1319 3.9E-259 T 11-10-2018 IPR017312 Peptidase S8A, subtilisin-related, Alteromonadales AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 SMART SM01274 17 150 3.4E-72 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 SMART SM00919 162 398 9.1E-140 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 Gene3D G3DSA:3.40.50.10380 1 159 7.7E-67 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 PIRSF PIRSF000106 41 411 2.3E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 SUPERFAMILY SSF53223 9 160 2.59E-51 T 11-10-2018 AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 Pfam PF00390 Malic enzyme, N-terminal domain 29 149 3.3E-25 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 SUPERFAMILY SSF51735 162 409 3.08E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 Gene3D G3DSA:3.40.50.720 160 411 2.3E-84 T 11-10-2018 AVL55_17865 cedaf2594d643948e10338444b6e9edb 411 Pfam PF03949 Malic enzyme, NAD binding domain 164 356 9.1E-26 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AVL55_19130 f5732eebbf320bf30b00da831f018bb3 238 Gene3D G3DSA:3.30.450.40 70 225 5.3E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_19130 f5732eebbf320bf30b00da831f018bb3 238 SMART SM00346 1 85 1.7E-7 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AVL55_19130 f5732eebbf320bf30b00da831f018bb3 238 Gene3D G3DSA:1.10.10.10 1 65 1.1E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_19130 f5732eebbf320bf30b00da831f018bb3 238 SUPERFAMILY SSF46785 2 65 3.14E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_19130 f5732eebbf320bf30b00da831f018bb3 238 SUPERFAMILY SSF55781 60 224 3.86E-16 T 11-10-2018 AVL55_19130 f5732eebbf320bf30b00da831f018bb3 238 Pfam PF09339 IclR helix-turn-helix domain 3 49 4.0E-9 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AVL55_18685 a03ba38c07db9a57cce5ee5c47061423 78 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 6 77 2.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_18685 a03ba38c07db9a57cce5ee5c47061423 78 PRINTS PR00344 Bacterial sensor protein C-terminal signature 26 36 2.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18685 a03ba38c07db9a57cce5ee5c47061423 78 PRINTS PR00344 Bacterial sensor protein C-terminal signature 63 76 2.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18685 a03ba38c07db9a57cce5ee5c47061423 78 PRINTS PR00344 Bacterial sensor protein C-terminal signature 39 57 2.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18685 a03ba38c07db9a57cce5ee5c47061423 78 PRINTS PR00344 Bacterial sensor protein C-terminal signature 8 22 2.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_18685 a03ba38c07db9a57cce5ee5c47061423 78 SUPERFAMILY SSF55874 2 77 1.26E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_18685 a03ba38c07db9a57cce5ee5c47061423 78 SMART SM00387 4 78 3.4E-4 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_18685 a03ba38c07db9a57cce5ee5c47061423 78 Gene3D G3DSA:3.30.565.10 1 78 6.2E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16295 da8cbd995e733fa7132fbf517d559d66 576 Gene3D G3DSA:3.40.190.10 190 509 2.0E-47 T 11-10-2018 AVL55_16295 da8cbd995e733fa7132fbf517d559d66 576 PIRSF PIRSF035859 2 576 2.7E-295 T 11-10-2018 IPR014597 ABC transporter, periplasmic substrate-binding protein, predicted GO:0005215 AVL55_16295 da8cbd995e733fa7132fbf517d559d66 576 SUPERFAMILY SSF53850 67 518 3.52E-61 T 11-10-2018 AVL55_16295 da8cbd995e733fa7132fbf517d559d66 576 Gene3D G3DSA:3.40.190.10 88 466 2.0E-47 T 11-10-2018 AVL55_16295 da8cbd995e733fa7132fbf517d559d66 576 Pfam PF01547 Bacterial extracellular solute-binding protein 88 422 1.1E-11 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AVL55_10825 751233de51ec37249ab3d31e44d0a098 165 Gene3D G3DSA:3.40.30.10 1 165 2.9E-49 T 11-10-2018 AVL55_10825 751233de51ec37249ab3d31e44d0a098 165 SUPERFAMILY SSF52833 1 162 1.61E-45 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_10825 751233de51ec37249ab3d31e44d0a098 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 AVL55_10825 751233de51ec37249ab3d31e44d0a098 165 Pfam PF08534 Redoxin 20 161 2.1E-29 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AVL55_10825 751233de51ec37249ab3d31e44d0a098 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 38.323 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 AVL55_06225 38ce4c63c1ec29de694e5c93a7d17e42 356 Pfam PF00487 Fatty acid desaturase 66 336 1.5E-28 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AVL55_08715 cce4fcd6201ef77f57931072766417a0 260 Gene3D G3DSA:3.20.20.140 1 260 3.4E-92 T 11-10-2018 AVL55_08715 cce4fcd6201ef77f57931072766417a0 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AVL55_08715 cce4fcd6201ef77f57931072766417a0 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AVL55_08715 cce4fcd6201ef77f57931072766417a0 260 PIRSF PIRSF005902 1 256 3.6E-81 T 11-10-2018 IPR001130 TatD family GO:0016788 AVL55_08715 cce4fcd6201ef77f57931072766417a0 260 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 1.4E-87 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AVL55_08715 cce4fcd6201ef77f57931072766417a0 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AVL55_08715 cce4fcd6201ef77f57931072766417a0 260 Pfam PF01026 TatD related DNase 3 252 6.8E-75 T 11-10-2018 IPR001130 TatD family GO:0016788 AVL55_08715 cce4fcd6201ef77f57931072766417a0 260 SUPERFAMILY SSF51556 2 253 8.52E-85 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_02050 3db766cfd24fead5f181f0a363fd13ef 656 SMART SM00382 32 219 5.0E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_02050 3db766cfd24fead5f181f0a363fd13ef 656 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_02050 3db766cfd24fead5f181f0a363fd13ef 656 Pfam PF12704 MacB-like periplasmic core domain 282 499 3.4E-39 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AVL55_02050 3db766cfd24fead5f181f0a363fd13ef 656 SUPERFAMILY SSF52540 3 226 1.82E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02050 3db766cfd24fead5f181f0a363fd13ef 656 Pfam PF00005 ABC transporter 23 171 8.0E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_02050 3db766cfd24fead5f181f0a363fd13ef 656 Pfam PF02687 FtsX-like permease family 562 649 4.5E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AVL55_02050 3db766cfd24fead5f181f0a363fd13ef 656 Gene3D G3DSA:3.40.50.300 1 265 1.2E-67 T 11-10-2018 AVL55_05150 befe035688b37dd0f8d74e5f4e1836f8 177 Pfam PF03748 Flagellar basal body-associated protein FliL 76 177 8.8E-19 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AVL55_06470 a8a7d5abb393f586528943f1ca7d0291 224 Gene3D G3DSA:3.20.20.70 3 224 3.4E-53 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_06470 a8a7d5abb393f586528943f1ca7d0291 224 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 224 35.381 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AVL55_06470 a8a7d5abb393f586528943f1ca7d0291 224 Pfam PF04055 Radical SAM superfamily 27 130 8.8E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_06470 a8a7d5abb393f586528943f1ca7d0291 224 Pfam PF13394 4Fe-4S single cluster domain 25 129 4.2E-14 T 11-10-2018 AVL55_06470 a8a7d5abb393f586528943f1ca7d0291 224 SUPERFAMILY SSF102114 28 200 2.62E-7 T 11-10-2018 AVL55_06470 a8a7d5abb393f586528943f1ca7d0291 224 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 10 224 1.8E-112 T 11-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AVL55_06470 a8a7d5abb393f586528943f1ca7d0291 224 PIRSF PIRSF000370 2 224 1.4E-64 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AVL55_09250 9fa4b268ead3f55c11578a099ddf5f42 205 SUPERFAMILY SSF55961 42 141 8.24E-9 T 11-10-2018 AVL55_09250 9fa4b268ead3f55c11578a099ddf5f42 205 Gene3D G3DSA:3.30.530.20 42 189 4.6E-11 T 11-10-2018 IPR023393 START-like domain superfamily AVL55_15145 bfc0324f97d5e9605c7880b5cc5f5475 172 Pfam PF13975 gag-polyprotein putative aspartyl protease 69 157 4.2E-21 T 11-10-2018 AVL55_15145 bfc0324f97d5e9605c7880b5cc5f5475 172 SUPERFAMILY SSF50630 58 161 2.55E-17 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AVL55_15145 bfc0324f97d5e9605c7880b5cc5f5475 172 Gene3D G3DSA:2.40.70.10 49 171 7.7E-29 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AVL55_15145 bfc0324f97d5e9605c7880b5cc5f5475 172 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 79 90 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AVL55_15145 bfc0324f97d5e9605c7880b5cc5f5475 172 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 55 170 4.7E-28 T 11-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal AVL55_12825 b650a2054679a59e858d4730129473d2 402 Pfam PF04286 Protein of unknown function (DUF445) 16 94 1.3E-10 T 11-10-2018 IPR007383 Protein of unknown function DUF445 AVL55_08960 9e070455257dcc44d4312ee4bc221abb 154 Gene3D G3DSA:3.10.590.10 1 154 2.3E-61 T 11-10-2018 AVL55_08960 9e070455257dcc44d4312ee4bc221abb 154 SUPERFAMILY SSF88697 1 151 9.94E-60 T 11-10-2018 IPR015947 PUA-like superfamily AVL55_08960 9e070455257dcc44d4312ee4bc221abb 154 Pfam PF01878 EVE domain 2 149 9.1E-55 T 11-10-2018 IPR002740 EVE domain AVL55_15810 a2ae0c08bedc2eaadcdd7001c59ad0f8 314 Pfam PF03186 CobD/Cbib protein 16 287 2.6E-26 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AVL55_05140 f7a50df78faa6641676248c525e36b7d 148 Pfam PF02050 Flagellar FliJ protein 19 140 2.8E-28 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AVL55_05140 f7a50df78faa6641676248c525e36b7d 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 141 5.2E-25 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AVL55_09760 9757b8761178638c68c9fad9d5b4da13 286 PIRSF PIRSF018249 1 284 4.3E-68 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AVL55_09760 9757b8761178638c68c9fad9d5b4da13 286 Gene3D G3DSA:3.40.50.150 1 285 3.8E-60 T 11-10-2018 AVL55_09760 9757b8761178638c68c9fad9d5b4da13 286 Pfam PF13847 Methyltransferase domain 96 215 1.3E-8 T 11-10-2018 IPR025714 Methyltransferase domain AVL55_09760 9757b8761178638c68c9fad9d5b4da13 286 SUPERFAMILY SSF53335 1 224 2.62E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_04575 0cb3b47fac827a3055e6e2b3a4b8ad23 353 ProSitePatterns PS01348 MraY family signature 2. 150 161 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_04575 0cb3b47fac827a3055e6e2b3a4b8ad23 353 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 10 350 2.2E-108 T 11-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AVL55_04575 0cb3b47fac827a3055e6e2b3a4b8ad23 353 Pfam PF00953 Glycosyl transferase family 4 75 233 1.9E-30 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AVL55_04575 0cb3b47fac827a3055e6e2b3a4b8ad23 353 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 25.415 T 11-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 7.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 7.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 7.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 7.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 7.6E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 Pfam PF01039 Carboxyl transferase domain 99 238 7.8E-16 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 36.663 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 Gene3D G3DSA:3.90.226.10 23 281 6.5E-87 T 11-10-2018 AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 SUPERFAMILY SSF52096 23 278 9.95E-88 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_12565 5213291829c434d25e7d130f363d9ff6 281 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 278 9.5E-133 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AVL55_04745 4a9aad0db4f8faa37b55df90fd51dd76 256 Gene3D G3DSA:1.20.1180.10 191 256 1.4E-25 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 AVL55_04745 4a9aad0db4f8faa37b55df90fd51dd76 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 46 7.7E-11 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_04745 4a9aad0db4f8faa37b55df90fd51dd76 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 1.9E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_04745 4a9aad0db4f8faa37b55df90fd51dd76 256 PIRSF PIRSF000456 1 256 2.4E-103 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AVL55_04745 4a9aad0db4f8faa37b55df90fd51dd76 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 8.4E-102 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AVL55_04745 4a9aad0db4f8faa37b55df90fd51dd76 256 Gene3D G3DSA:2.160.10.10 1 186 9.2E-54 T 11-10-2018 AVL55_04745 4a9aad0db4f8faa37b55df90fd51dd76 256 SUPERFAMILY SSF51161 2 256 2.36E-79 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_04745 4a9aad0db4f8faa37b55df90fd51dd76 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 43.256 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AVL55_04745 4a9aad0db4f8faa37b55df90fd51dd76 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 4.3E-28 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 AVL55_00185 6742557418ebda35bb2b2a35a18caaea 176 PIRSF PIRSF029681 1 176 3.9E-44 T 11-10-2018 IPR018550 Lipid A 3-O-deacylase-related AVL55_00185 6742557418ebda35bb2b2a35a18caaea 176 Gene3D G3DSA:2.40.160.20 35 175 6.6E-36 T 11-10-2018 AVL55_00185 6742557418ebda35bb2b2a35a18caaea 176 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 40 175 2.9E-30 T 11-10-2018 IPR018550 Lipid A 3-O-deacylase-related AVL55_10665 bad7cd061089fb6f5451256101292fba 435 Gene3D G3DSA:1.10.579.10 313 435 6.9E-51 T 11-10-2018 AVL55_10665 bad7cd061089fb6f5451256101292fba 435 Pfam PF00875 DNA photolyase 18 181 5.2E-34 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AVL55_10665 bad7cd061089fb6f5451256101292fba 435 PRINTS PR00147 DNA photolyase signature 397 411 6.1E-11 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AVL55_10665 bad7cd061089fb6f5451256101292fba 435 PRINTS PR00147 DNA photolyase signature 338 354 6.1E-11 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AVL55_10665 bad7cd061089fb6f5451256101292fba 435 PRINTS PR00147 DNA photolyase signature 358 376 6.1E-11 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AVL55_10665 bad7cd061089fb6f5451256101292fba 435 SUPERFAMILY SSF48173 213 435 8.24E-69 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AVL55_10665 bad7cd061089fb6f5451256101292fba 435 Gene3D G3DSA:3.40.50.620 1 140 5.6E-30 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_10665 bad7cd061089fb6f5451256101292fba 435 Pfam PF03441 FAD binding domain of DNA photolyase 291 435 1.1E-40 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AVL55_10665 bad7cd061089fb6f5451256101292fba 435 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 16 435 4.7E-148 T 11-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 AVL55_10665 bad7cd061089fb6f5451256101292fba 435 SUPERFAMILY SSF52425 13 193 2.22E-46 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AVL55_10665 bad7cd061089fb6f5451256101292fba 435 Gene3D G3DSA:1.25.40.80 146 311 6.2E-46 T 11-10-2018 AVL55_06985 a6c0e0dad4bffe370b5eeda47616cd74 550 Pfam PF02470 MlaD protein 293 392 5.1E-11 T 11-10-2018 IPR003399 Mce/MlaD AVL55_06985 a6c0e0dad4bffe370b5eeda47616cd74 550 Pfam PF02470 MlaD protein 46 134 1.2E-12 T 11-10-2018 IPR003399 Mce/MlaD AVL55_15620 43ee569ae589009c08bc16a2bb9e18a9 270 Pfam PF04116 Fatty acid hydroxylase superfamily 79 212 6.0E-31 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AVL55_06260 ee112075a40d11050d825b6570f1cc6c 250 SUPERFAMILY SSF55120 4 214 5.6E-46 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_06260 ee112075a40d11050d825b6570f1cc6c 250 Gene3D G3DSA:3.30.2350.10 1 215 3.8E-48 T 11-10-2018 AVL55_06260 ee112075a40d11050d825b6570f1cc6c 250 Pfam PF00849 RNA pseudouridylate synthase 12 171 5.9E-26 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_17340 88b8fb6f17341e400044c0e84359aaa4 383 Gene3D G3DSA:3.40.50.300 130 316 5.9E-15 T 11-10-2018 AVL55_17340 88b8fb6f17341e400044c0e84359aaa4 383 SUPERFAMILY SSF52540 139 374 7.97E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17340 88b8fb6f17341e400044c0e84359aaa4 383 Pfam PF13469 Sulfotransferase family 142 313 1.3E-9 T 11-10-2018 AVL55_16265 3d27333ff90b00da5e176ccb0ecf41d6 171 SUPERFAMILY SSF88723 2 120 8.97E-11 T 11-10-2018 IPR029060 PIN-like domain superfamily AVL55_16265 3d27333ff90b00da5e176ccb0ecf41d6 171 Pfam PF01850 PIN domain 50 106 1.9E-5 T 11-10-2018 IPR002716 PIN domain AVL55_16265 3d27333ff90b00da5e176ccb0ecf41d6 171 Gene3D G3DSA:3.40.50.1010 1 118 1.6E-6 T 11-10-2018 AVL55_11670 dc4020be28b5a0955d72ac9e6a310537 271 SUPERFAMILY SSF52266 55 249 2.44E-29 T 11-10-2018 AVL55_11670 dc4020be28b5a0955d72ac9e6a310537 271 Gene3D G3DSA:3.40.50.1110 40 244 7.0E-21 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AVL55_11670 dc4020be28b5a0955d72ac9e6a310537 271 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 58 238 1.8E-12 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AVL55_04270 7d6034c3f0fe06cf4849c6194b48d02d 637 Gene3D G3DSA:3.40.50.300 37 217 1.6E-5 T 11-10-2018 AVL55_04270 7d6034c3f0fe06cf4849c6194b48d02d 637 Pfam PF05729 NACHT domain 100 241 1.9E-10 T 11-10-2018 IPR007111 NACHT nucleoside triphosphatase AVL55_04270 7d6034c3f0fe06cf4849c6194b48d02d 637 SUPERFAMILY SSF52540 100 254 1.53E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16925 a75dfd136e5738b73eab853aea8e3a85 737 Pfam PF00326 Prolyl oligopeptidase family 541 736 1.0E-54 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_16925 a75dfd136e5738b73eab853aea8e3a85 737 Gene3D G3DSA:3.40.50.1820 486 736 8.0E-76 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_16925 a75dfd136e5738b73eab853aea8e3a85 737 SUPERFAMILY SSF82171 19 466 1.7E-66 T 11-10-2018 AVL55_16925 a75dfd136e5738b73eab853aea8e3a85 737 SUPERFAMILY SSF53474 482 736 2.9E-74 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_16925 a75dfd136e5738b73eab853aea8e3a85 737 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 126 445 5.9E-98 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AVL55_16925 a75dfd136e5738b73eab853aea8e3a85 737 Gene3D G3DSA:2.140.10.30 20 476 5.3E-165 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AVL55_19075 72ca9a1b7d7fbedbccaa498e7779fdc4 196 SUPERFAMILY SSF88659 107 163 2.83E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_19075 72ca9a1b7d7fbedbccaa498e7779fdc4 196 Gene3D G3DSA:1.10.1740.10 4 107 6.9E-7 T 11-10-2018 AVL55_19075 72ca9a1b7d7fbedbccaa498e7779fdc4 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 162 1.1E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_19075 72ca9a1b7d7fbedbccaa498e7779fdc4 196 Pfam PF04542 Sigma-70 region 2 22 73 9.5E-8 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_19075 72ca9a1b7d7fbedbccaa498e7779fdc4 196 Pfam PF08281 Sigma-70, region 4 115 162 3.4E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_19075 72ca9a1b7d7fbedbccaa498e7779fdc4 196 SUPERFAMILY SSF88946 6 84 7.46E-9 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_19075 72ca9a1b7d7fbedbccaa498e7779fdc4 196 Gene3D G3DSA:1.10.10.10 108 165 3.7E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_17225 0d99e8168f538bf25893ccd59aaa5756 476 Gene3D G3DSA:1.20.1600.10 26 469 2.4E-45 T 11-10-2018 AVL55_17225 0d99e8168f538bf25893ccd59aaa5756 476 Pfam PF02321 Outer membrane efflux protein 290 465 1.2E-17 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_17225 0d99e8168f538bf25893ccd59aaa5756 476 SUPERFAMILY SSF56954 6 468 2.75E-37 T 11-10-2018 AVL55_10145 2d442a3c4f0ba3e4713534d346afbfb7 585 Pfam PF11949 Protein of unknown function (DUF3466) 6 582 5.9E-79 T 11-10-2018 IPR022562 Protein of unknown function DUF3466 AVL55_18755 ebee803bab00c07723d2d2b39b32fd05 140 SUPERFAMILY SSF54427 4 136 3.47E-16 T 11-10-2018 IPR032710 NTF2-like domain superfamily AVL55_18755 ebee803bab00c07723d2d2b39b32fd05 140 Pfam PF14534 Domain of unknown function (DUF4440) 5 125 5.9E-8 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 AVL55_18755 ebee803bab00c07723d2d2b39b32fd05 140 Gene3D G3DSA:3.10.450.50 2 140 1.3E-22 T 11-10-2018 AVL55_06140 ed10756c210fc3c5ea80e5db9a33c58f 215 Gene3D G3DSA:2.10.109.10 81 210 7.1E-49 T 11-10-2018 AVL55_06140 ed10756c210fc3c5ea80e5db9a33c58f 215 SUPERFAMILY SSF47413 4 64 8.16E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_06140 ed10756c210fc3c5ea80e5db9a33c58f 215 Pfam PF01381 Helix-turn-helix 16 61 2.1E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_06140 ed10756c210fc3c5ea80e5db9a33c58f 215 SMART SM00530 7 61 1.6E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_06140 ed10756c210fc3c5ea80e5db9a33c58f 215 Pfam PF00717 Peptidase S24-like 126 200 1.1E-15 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AVL55_06140 ed10756c210fc3c5ea80e5db9a33c58f 215 Gene3D G3DSA:1.10.260.40 1 68 8.6E-24 T 11-10-2018 AVL55_06140 ed10756c210fc3c5ea80e5db9a33c58f 215 SUPERFAMILY SSF51306 84 211 7.5E-28 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AVL55_11525 45686fbec692140febc49d7724d46cd9 436 SUPERFAMILY SSF53098 50 363 1.59E-25 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_11525 45686fbec692140febc49d7724d46cd9 436 Pfam PF13006 Insertion element 4 transposase N-terminal 18 106 2.6E-22 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AVL55_11525 45686fbec692140febc49d7724d46cd9 436 Pfam PF01609 Transposase DDE domain 128 346 2.6E-23 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AVL55_02230 01ad8f5f676ceb2896db1bf49bcd2d83 424 Pfam PF06965 Na+/H+ antiporter 1 23 398 1.1E-148 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AVL55_02230 01ad8f5f676ceb2896db1bf49bcd2d83 424 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 24 398 8.7E-138 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AVL55_02230 01ad8f5f676ceb2896db1bf49bcd2d83 424 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 21 404 22.768 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AVL55_02230 01ad8f5f676ceb2896db1bf49bcd2d83 424 Gene3D G3DSA:1.20.1530.10 19 405 5.2E-149 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily AVL55_04750 40263967b76bad6773a020371e08e415 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 381 38.13 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AVL55_04750 40263967b76bad6773a020371e08e415 382 Pfam PF02684 Lipid-A-disaccharide synthetase 8 376 9.0E-113 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AVL55_04750 40263967b76bad6773a020371e08e415 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 378 3.2E-118 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AVL55_04750 40263967b76bad6773a020371e08e415 382 SUPERFAMILY SSF53756 6 307 3.89E-33 T 11-10-2018 AVL55_09850 af114d8fd6a15513268a1a09ff76fb68 82 SUPERFAMILY SSF47473 6 76 4.79E-19 T 11-10-2018 IPR011992 EF-hand domain pair AVL55_09850 af114d8fd6a15513268a1a09ff76fb68 82 ProSitePatterns PS00018 EF-hand calcium-binding domain. 59 71 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AVL55_09850 af114d8fd6a15513268a1a09ff76fb68 82 Pfam PF13499 EF-hand domain pair 13 75 6.2E-12 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AVL55_09850 af114d8fd6a15513268a1a09ff76fb68 82 SMART SM00054 14 42 4.4E-5 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AVL55_09850 af114d8fd6a15513268a1a09ff76fb68 82 SMART SM00054 50 78 0.0061 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AVL55_09850 af114d8fd6a15513268a1a09ff76fb68 82 ProSitePatterns PS00018 EF-hand calcium-binding domain. 23 35 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AVL55_09850 af114d8fd6a15513268a1a09ff76fb68 82 Gene3D G3DSA:1.10.238.10 1 80 9.1E-19 T 11-10-2018 AVL55_18175 a7a6aadbcb0ec67fcbd03c747e7d045f 252 SUPERFAMILY SSF53067 118 242 7.77E-24 T 11-10-2018 AVL55_18175 a7a6aadbcb0ec67fcbd03c747e7d045f 252 Hamap MF_01274 Type III pantothenate kinase [coaX]. 8 246 15.184 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AVL55_18175 a7a6aadbcb0ec67fcbd03c747e7d045f 252 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 10 241 5.0E-26 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AVL55_18175 a7a6aadbcb0ec67fcbd03c747e7d045f 252 Pfam PF03309 Type III pantothenate kinase 10 191 1.8E-35 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AVL55_18175 a7a6aadbcb0ec67fcbd03c747e7d045f 252 Gene3D G3DSA:3.30.420.40 11 239 9.5E-50 T 11-10-2018 AVL55_18175 a7a6aadbcb0ec67fcbd03c747e7d045f 252 SUPERFAMILY SSF53067 10 113 6.47E-18 T 11-10-2018 AVL55_18175 a7a6aadbcb0ec67fcbd03c747e7d045f 252 Gene3D G3DSA:3.30.420.490 119 231 9.5E-50 T 11-10-2018 AVL55_05410 d85cb91c50c9c23960f7728e3b026724 148 Pfam PF04024 PspC domain 5 63 1.5E-19 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AVL55_05410 d85cb91c50c9c23960f7728e3b026724 148 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 5 148 2.0E-43 T 11-10-2018 IPR014320 Phage shock protein, PspC AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 8 603 4.2E-242 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 Gene3D G3DSA:2.60.40.420 172 366 3.1E-40 T 11-10-2018 IPR008972 Cupredoxin AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 Gene3D G3DSA:2.60.40.420 42 164 1.8E-36 T 11-10-2018 IPR008972 Cupredoxin AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 Pfam PF07732 Multicopper oxidase 66 166 5.8E-37 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 SUPERFAMILY SSF49503 449 603 3.32E-36 T 11-10-2018 IPR008972 Cupredoxin AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 Pfam PF00394 Multicopper oxidase 174 345 6.7E-31 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 SUPERFAMILY SSF49503 171 382 2.89E-54 T 11-10-2018 IPR008972 Cupredoxin AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 SUPERFAMILY SSF49503 62 194 1.81E-35 T 11-10-2018 IPR008972 Cupredoxin AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 ProSitePatterns PS00080 Multicopper oxidases signature 2. 586 597 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AVL55_01435 ec2963b4cb701cccbe75c18ccd65b6be 604 Pfam PF07731 Multicopper oxidase 488 603 1.2E-25 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AVL55_04795 7a533f28338e158e6daa32ce2ef7c7d3 467 Gene3D G3DSA:1.10.530.10 293 466 3.7E-32 T 11-10-2018 AVL55_04795 7a533f28338e158e6daa32ce2ef7c7d3 467 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 467 45.262 T 11-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AVL55_04795 7a533f28338e158e6daa32ce2ef7c7d3 467 Gene3D G3DSA:3.40.190.10 127 232 3.6E-53 T 11-10-2018 AVL55_04795 7a533f28338e158e6daa32ce2ef7c7d3 467 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 275 1.2E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_04795 7a533f28338e158e6daa32ce2ef7c7d3 467 SUPERFAMILY SSF53850 43 277 1.28E-29 T 11-10-2018 AVL55_04795 7a533f28338e158e6daa32ce2ef7c7d3 467 SUPERFAMILY SSF53955 297 461 2.14E-31 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AVL55_04795 7a533f28338e158e6daa32ce2ef7c7d3 467 Gene3D G3DSA:3.40.190.10 39 271 3.6E-53 T 11-10-2018 AVL55_04795 7a533f28338e158e6daa32ce2ef7c7d3 467 SMART SM00062 42 276 5.2E-14 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_04795 7a533f28338e158e6daa32ce2ef7c7d3 467 Pfam PF01464 Transglycosylase SLT domain 305 402 7.9E-19 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AVL55_09360 e88f4f0cdc7b08a0ba1f58783c2e9c10 504 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AVL55_09360 e88f4f0cdc7b08a0ba1f58783c2e9c10 504 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 437 5.0E-85 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_09360 e88f4f0cdc7b08a0ba1f58783c2e9c10 504 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 498 3.0E-196 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AVL55_09360 e88f4f0cdc7b08a0ba1f58783c2e9c10 504 Gene3D G3DSA:1.20.1730.10 12 503 9.8E-79 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AVL55_09360 e88f4f0cdc7b08a0ba1f58783c2e9c10 504 Pfam PF00474 Sodium:solute symporter family 34 437 3.0E-89 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AVL55_02970 aceea5f4a3938690ed0e7ad8dbff629b 327 Gene3D G3DSA:3.30.950.10 189 326 3.8E-38 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AVL55_02970 aceea5f4a3938690ed0e7ad8dbff629b 327 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 75 286 6.2E-48 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AVL55_02970 aceea5f4a3938690ed0e7ad8dbff629b 327 SUPERFAMILY SSF53790 69 314 1.96E-69 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AVL55_02970 aceea5f4a3938690ed0e7ad8dbff629b 327 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 73 310 1.3E-79 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AVL55_02970 aceea5f4a3938690ed0e7ad8dbff629b 327 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 78 92 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AVL55_02970 aceea5f4a3938690ed0e7ad8dbff629b 327 Gene3D G3DSA:3.40.1010.10 71 188 9.4E-40 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AVL55_05050 c32cbb2428ea1d195e41098003cd1fe1 344 Pfam PF13480 Acetyltransferase (GNAT) domain 164 299 1.2E-10 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AVL55_05050 c32cbb2428ea1d195e41098003cd1fe1 344 Gene3D G3DSA:3.40.630.30 143 304 2.9E-23 T 11-10-2018 AVL55_05050 c32cbb2428ea1d195e41098003cd1fe1 344 SUPERFAMILY SSF55729 155 316 6.68E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_08520 a18e883669917e59d074c87010b2cb2a 156 Pfam PF00075 RNase H 4 143 6.0E-53 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AVL55_08520 a18e883669917e59d074c87010b2cb2a 156 Gene3D G3DSA:3.30.420.10 2 151 3.1E-61 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_08520 a18e883669917e59d074c87010b2cb2a 156 Hamap MF_00042 Ribonuclease H [rnhA]. 3 151 36.598 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 AVL55_08520 a18e883669917e59d074c87010b2cb2a 156 SUPERFAMILY SSF53098 4 143 4.81E-59 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_12320 99bc65ea644b19f412bdacd71fbee95b 128 Pfam PF02411 MerT mercuric transport protein 3 113 1.0E-51 T 11-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 AVL55_12845 b423714adaec80131285705be363d007 119 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 38 83 8.8E-7 T 11-10-2018 IPR008769 Poly granule associated AVL55_12845 b423714adaec80131285705be363d007 119 Gene3D G3DSA:1.20.120.20 1 119 1.6E-5 T 11-10-2018 AVL55_06310 234adcc77f3c6597a9e4e670b9f5014a 405 SUPERFAMILY SSF103473 23 397 2.88E-37 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_06310 234adcc77f3c6597a9e4e670b9f5014a 405 PIRSF PIRSF004925 18 405 8.3E-90 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter AVL55_06310 234adcc77f3c6597a9e4e670b9f5014a 405 Gene3D G3DSA:1.20.1250.20 19 206 5.7E-15 T 11-10-2018 AVL55_06310 234adcc77f3c6597a9e4e670b9f5014a 405 Gene3D G3DSA:1.20.1250.20 207 404 6.7E-34 T 11-10-2018 AVL55_06310 234adcc77f3c6597a9e4e670b9f5014a 405 Pfam PF12832 MFS_1 like family 24 377 5.9E-76 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain AVL55_01520 442ab133ad9f4a3f4261664c5389233e 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 1.7E-112 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AVL55_01520 442ab133ad9f4a3f4261664c5389233e 382 Gene3D G3DSA:1.20.1090.10 183 382 2.1E-65 T 11-10-2018 AVL55_01520 442ab133ad9f4a3f4261664c5389233e 382 SUPERFAMILY SSF56796 5 379 4.58E-118 T 11-10-2018 AVL55_01520 442ab133ad9f4a3f4261664c5389233e 382 Gene3D G3DSA:3.40.50.1970 1 182 1.8E-52 T 11-10-2018 AVL55_19385 9423f14ba0580a6a1d6fe5af097cb6e3 251 Pfam PF01203 Type II secretion system (T2SS), protein N 37 249 2.9E-48 T 11-10-2018 IPR022792 Type II secretion system, protein N AVL55_15100 19224d2461910c588771bc79ab293190 1040 Gene3D G3DSA:3.30.70.1430 40 827 0.0 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 Gene3D G3DSA:1.20.1640.10 523 1033 0.0 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 Gene3D G3DSA:3.30.70.1440 679 876 0.0 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_15100 19224d2461910c588771bc79ab293190 1040 SUPERFAMILY SSF82866 841 1037 1.96E-45 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 Pfam PF00873 AcrB/AcrD/AcrF family 3 1036 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 SUPERFAMILY SSF82693 138 332 4.88E-28 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 SUPERFAMILY SSF82866 298 498 3.14E-52 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 Gene3D G3DSA:1.20.1640.10 10 522 0.0 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 SUPERFAMILY SSF82693 41 134 2.17E-27 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1038 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AVL55_15100 19224d2461910c588771bc79ab293190 1040 Gene3D G3DSA:3.30.70.1430 577 678 0.0 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 SUPERFAMILY SSF82714 187 274 1.44E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_15100 19224d2461910c588771bc79ab293190 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 1.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 1.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_15100 19224d2461910c588771bc79ab293190 1040 Gene3D G3DSA:3.30.70.1320 135 334 0.0 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 SUPERFAMILY SSF82714 732 817 5.1E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_15100 19224d2461910c588771bc79ab293190 1040 SUPERFAMILY SSF82693 575 681 7.85E-25 T 11-10-2018 AVL55_15100 19224d2461910c588771bc79ab293190 1040 Gene3D G3DSA:3.30.2090.10 731 819 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AVL55_15100 19224d2461910c588771bc79ab293190 1040 SUPERFAMILY SSF82693 682 867 4.45E-25 T 11-10-2018 AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 SMART SM00895 96 224 8.1E-18 T 11-10-2018 IPR011711 GntR, C-terminal AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 SUPERFAMILY SSF48008 92 230 6.8E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.0E-22 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 Pfam PF07729 FCD domain 96 223 1.6E-20 T 11-10-2018 IPR011711 GntR, C-terminal AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.4E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.4E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 SUPERFAMILY SSF46785 4 74 1.19E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 SMART SM00345 12 71 3.8E-23 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 Gene3D G3DSA:1.10.10.10 1 71 4.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_15130 7e0b65f1ef69c50473322d3f985a2480 248 Gene3D G3DSA:1.20.120.530 94 231 4.3E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AVL55_04400 f8ffdef877db65742226ee42e28e725f 398 SMART SM00471 149 285 5.6E-4 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_04400 f8ffdef877db65742226ee42e28e725f 398 Pfam PF11871 Domain of unknown function (DUF3391) 4 119 1.0E-14 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 AVL55_04400 f8ffdef877db65742226ee42e28e725f 398 SUPERFAMILY SSF109604 143 313 3.14E-26 T 11-10-2018 AVL55_04400 f8ffdef877db65742226ee42e28e725f 398 Pfam PF13487 HD domain 204 266 3.6E-14 T 11-10-2018 AVL55_04400 f8ffdef877db65742226ee42e28e725f 398 Gene3D G3DSA:1.10.3210.10 4 315 1.4E-68 T 11-10-2018 AVL55_15925 b44fa37fed18b072611085dc59935064 269 Pfam PF13614 AAA domain 3 158 5.2E-21 T 11-10-2018 IPR025669 AAA domain AVL55_15925 b44fa37fed18b072611085dc59935064 269 SUPERFAMILY SSF52540 1 267 4.86E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_15925 b44fa37fed18b072611085dc59935064 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 265 9.4E-113 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AVL55_15925 b44fa37fed18b072611085dc59935064 269 Gene3D G3DSA:3.40.50.300 1 258 7.6E-71 T 11-10-2018 AVL55_15925 b44fa37fed18b072611085dc59935064 269 PIRSF PIRSF003092 1 269 1.8E-94 T 11-10-2018 IPR025501 ATP binding protein MinD AVL55_02835 fb7fe0372cb38196c70376b918c1f9bb 146 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 9.2E-41 T 11-10-2018 IPR009659 Protein of unknown function DUF1249 AVL55_10820 14c11270089ec46a5298928e4b47c6c5 276 SUPERFAMILY SSF52821 163 275 5.89E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_10820 14c11270089ec46a5298928e4b47c6c5 276 SMART SM00450 151 270 1.6E-15 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_10820 14c11270089ec46a5298928e4b47c6c5 276 SMART SM00450 18 129 5.0E-7 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_10820 14c11270089ec46a5298928e4b47c6c5 276 Gene3D G3DSA:3.40.250.10 2 145 5.1E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_10820 14c11270089ec46a5298928e4b47c6c5 276 ProSitePatterns PS00683 Rhodanese C-terminal signature. 254 264 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AVL55_10820 14c11270089ec46a5298928e4b47c6c5 276 Pfam PF00581 Rhodanese-like domain 156 266 1.7E-10 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_10820 14c11270089ec46a5298928e4b47c6c5 276 Pfam PF00581 Rhodanese-like domain 60 125 1.4E-6 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_10820 14c11270089ec46a5298928e4b47c6c5 276 Gene3D G3DSA:3.40.250.10 153 276 3.1E-39 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_10820 14c11270089ec46a5298928e4b47c6c5 276 SUPERFAMILY SSF52821 3 132 1.57E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_10700 5196173786b72deadf45b3a991161209 140 PIRSF PIRSF006276 1 140 2.7E-28 T 11-10-2018 IPR006015 Universal stress protein A AVL55_10700 5196173786b72deadf45b3a991161209 140 PRINTS PR01438 Universal stress protein signature 4 22 5.3E-14 T 11-10-2018 IPR006015 Universal stress protein A AVL55_10700 5196173786b72deadf45b3a991161209 140 PRINTS PR01438 Universal stress protein signature 100 112 5.3E-14 T 11-10-2018 IPR006015 Universal stress protein A AVL55_10700 5196173786b72deadf45b3a991161209 140 PRINTS PR01438 Universal stress protein signature 117 139 5.3E-14 T 11-10-2018 IPR006015 Universal stress protein A AVL55_10700 5196173786b72deadf45b3a991161209 140 Pfam PF00582 Universal stress protein family 3 139 5.6E-26 T 11-10-2018 IPR006016 UspA AVL55_10700 5196173786b72deadf45b3a991161209 140 Gene3D G3DSA:3.40.50.620 1 140 2.4E-31 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_10700 5196173786b72deadf45b3a991161209 140 SUPERFAMILY SSF52402 4 139 4.95E-30 T 11-10-2018 AVL55_09455 6a85325b6e94caacd5aec96b3826045a 300 Gene3D G3DSA:1.25.40.10 30 296 1.9E-76 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_09455 6a85325b6e94caacd5aec96b3826045a 300 Pfam PF13181 Tetratricopeptide repeat 69 101 0.03 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09455 6a85325b6e94caacd5aec96b3826045a 300 PIRSF PIRSF004654 1 298 2.7E-105 T 11-10-2018 IPR023605 Lipoprotein NlpI AVL55_09455 6a85325b6e94caacd5aec96b3826045a 300 SUPERFAMILY SSF48452 36 289 5.38E-67 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_09455 6a85325b6e94caacd5aec96b3826045a 300 SMART SM00028 137 170 490.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09455 6a85325b6e94caacd5aec96b3826045a 300 SMART SM00028 103 136 6.9E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09455 6a85325b6e94caacd5aec96b3826045a 300 SMART SM00028 241 274 41.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_09455 6a85325b6e94caacd5aec96b3826045a 300 SMART SM00028 69 102 1.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_19245 4af1cc6051156f7308817fecf5f31139 332 Pfam PF01207 Dihydrouridine synthase (Dus) 13 318 8.5E-117 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AVL55_19245 4af1cc6051156f7308817fecf5f31139 332 Gene3D G3DSA:1.10.1200.80 252 327 5.4E-7 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AVL55_19245 4af1cc6051156f7308817fecf5f31139 332 PIRSF PIRSF006621 1 328 1.2E-108 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AVL55_19245 4af1cc6051156f7308817fecf5f31139 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 1.7E-134 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AVL55_19245 4af1cc6051156f7308817fecf5f31139 332 Gene3D G3DSA:3.20.20.70 6 248 1.5E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_19245 4af1cc6051156f7308817fecf5f31139 332 SUPERFAMILY SSF51395 10 318 2.31E-93 T 11-10-2018 AVL55_19245 4af1cc6051156f7308817fecf5f31139 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.721 T 11-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AVL55_19245 4af1cc6051156f7308817fecf5f31139 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AVL55_06275 fcfe256580511985a97ccb7cd273051d 533 Pfam PF04262 Glutamate-cysteine ligase 14 386 2.5E-165 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AVL55_06275 fcfe256580511985a97ccb7cd273051d 533 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 533 203.18 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AVL55_06275 fcfe256580511985a97ccb7cd273051d 533 SUPERFAMILY SSF55931 12 520 2.22E-190 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AVL55_06275 fcfe256580511985a97ccb7cd273051d 533 Gene3D G3DSA:3.30.590.20 23 530 1.2E-185 T 11-10-2018 AVL55_06275 fcfe256580511985a97ccb7cd273051d 533 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 12 523 8.3E-188 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AVL55_17010 a3daa04123a9b79f312276214df27b36 335 Gene3D G3DSA:3.40.50.2300 164 296 1.6E-58 T 11-10-2018 AVL55_17010 a3daa04123a9b79f312276214df27b36 335 SMART SM00354 8 78 4.1E-22 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_17010 a3daa04123a9b79f312276214df27b36 335 Pfam PF13377 Periplasmic binding protein-like domain 175 334 8.5E-29 T 11-10-2018 AVL55_17010 a3daa04123a9b79f312276214df27b36 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 5.3E-14 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AVL55_17010 a3daa04123a9b79f312276214df27b36 335 SUPERFAMILY SSF47413 8 65 6.26E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_17010 a3daa04123a9b79f312276214df27b36 335 Gene3D G3DSA:3.40.50.2300 70 312 1.6E-58 T 11-10-2018 AVL55_17010 a3daa04123a9b79f312276214df27b36 335 Gene3D G3DSA:1.10.260.40 1 65 1.1E-18 T 11-10-2018 AVL55_17010 a3daa04123a9b79f312276214df27b36 335 SUPERFAMILY SSF53822 67 334 2.78E-54 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_05020 a6526d964b945d6857484c36ea8f3f7f 458 Pfam PF00535 Glycosyl transferase family 2 10 122 1.6E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_05020 a6526d964b945d6857484c36ea8f3f7f 458 Gene3D G3DSA:3.90.550.10 2 240 2.7E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_05020 a6526d964b945d6857484c36ea8f3f7f 458 SUPERFAMILY SSF53448 7 219 4.88E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_14710 4b70564226addf80d07b2729d60cd991 331 Hamap MF_00540 Adenosine deaminase [add]. 1 331 50.208 T 11-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AVL55_14710 4b70564226addf80d07b2729d60cd991 331 SUPERFAMILY SSF51556 4 329 1.21E-69 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_14710 4b70564226addf80d07b2729d60cd991 331 Pfam PF00962 Adenosine/AMP deaminase 5 326 3.2E-82 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AVL55_14710 4b70564226addf80d07b2729d60cd991 331 Gene3D G3DSA:3.20.20.140 1 331 1.0E-94 T 11-10-2018 AVL55_14710 4b70564226addf80d07b2729d60cd991 331 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 7 329 6.1E-103 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AVL55_14215 daddb6d25d2dda83c5ac803e78363ff7 618 Gene3D G3DSA:3.30.830.10 5 200 3.1E-22 T 11-10-2018 AVL55_14215 daddb6d25d2dda83c5ac803e78363ff7 618 Pfam PF00675 Insulinase (Peptidase family M16) 30 125 2.0E-7 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AVL55_14215 daddb6d25d2dda83c5ac803e78363ff7 618 SUPERFAMILY SSF63411 17 180 3.26E-15 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_11785 569c2e1cdc744e0dfb67dc3d07126a7a 324 Pfam PF08908 Domain of unknown function (DUF1852) 2 321 2.3E-174 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 AVL55_11785 569c2e1cdc744e0dfb67dc3d07126a7a 324 PIRSF PIRSF034367 1 324 3.5E-182 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 AVL55_00855 b93fe9ba6936e8574b03374b910cbdfe 170 Gene3D G3DSA:1.20.144.10 54 166 9.6E-21 T 11-10-2018 AVL55_00855 b93fe9ba6936e8574b03374b910cbdfe 170 Pfam PF01569 PAP2 superfamily 59 166 1.0E-22 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AVL55_00855 b93fe9ba6936e8574b03374b910cbdfe 170 SUPERFAMILY SSF48317 4 168 2.62E-41 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AVL55_00855 b93fe9ba6936e8574b03374b910cbdfe 170 SMART SM00014 57 166 9.4E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AVL55_11965 5f9be358bb8bbdf272d2bf68b096cf60 249 Pfam PF05239 PRC-barrel domain 149 214 1.6E-5 T 11-10-2018 IPR027275 PRC-barrel domain AVL55_11965 5f9be358bb8bbdf272d2bf68b096cf60 249 SUPERFAMILY SSF50346 131 230 2.35E-16 T 11-10-2018 IPR011033 PRC-barrel-like superfamily AVL55_11965 5f9be358bb8bbdf272d2bf68b096cf60 249 Gene3D G3DSA:2.30.30.240 132 224 1.1E-9 T 11-10-2018 AVL55_11965 5f9be358bb8bbdf272d2bf68b096cf60 249 Gene3D G3DSA:3.90.50.10 5 113 9.3E-15 T 11-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 AVL55_11965 5f9be358bb8bbdf272d2bf68b096cf60 249 SUPERFAMILY SSF50346 2 114 3.14E-23 T 11-10-2018 IPR011033 PRC-barrel-like superfamily AVL55_04755 cb2cecb56291bb5f7127745aa0357c77 203 SUPERFAMILY SSF53098 15 201 1.82E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_04755 cb2cecb56291bb5f7127745aa0357c77 203 Pfam PF01351 Ribonuclease HII 19 195 4.1E-39 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain AVL55_04755 cb2cecb56291bb5f7127745aa0357c77 203 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 196 36.532 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 AVL55_04755 cb2cecb56291bb5f7127745aa0357c77 203 Gene3D G3DSA:3.30.420.10 2 203 5.6E-75 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_01645 0ac9413f9d9c0745e871ad47f1f8bf5d 436 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 53 228 1.1E-54 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AVL55_01645 0ac9413f9d9c0745e871ad47f1f8bf5d 436 SUPERFAMILY SSF53756 75 421 5.81E-15 T 11-10-2018 AVL55_01645 0ac9413f9d9c0745e871ad47f1f8bf5d 436 Gene3D G3DSA:3.40.50.11720 53 226 6.9E-38 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AVL55_01645 0ac9413f9d9c0745e871ad47f1f8bf5d 436 Gene3D G3DSA:3.40.50.2000 234 419 6.8E-59 T 11-10-2018 AVL55_18370 6e918ea5f16086f4f6527b4a061c5b31 235 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 233 8.2E-25 T 11-10-2018 AVL55_18370 6e918ea5f16086f4f6527b4a061c5b31 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_18370 6e918ea5f16086f4f6527b4a061c5b31 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_18370 6e918ea5f16086f4f6527b4a061c5b31 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_18370 6e918ea5f16086f4f6527b4a061c5b31 235 Gene3D G3DSA:3.40.50.720 4 235 9.3E-46 T 11-10-2018 AVL55_18370 6e918ea5f16086f4f6527b4a061c5b31 235 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_18370 6e918ea5f16086f4f6527b4a061c5b31 235 SUPERFAMILY SSF51735 5 234 3.82E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_04870 07c4032a2a0fd48a544d9edc211bc3ff 247 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 1.1E-23 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AVL55_04870 07c4032a2a0fd48a544d9edc211bc3ff 247 SUPERFAMILY SSF117143 77 205 1.44E-20 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AVL55_04870 07c4032a2a0fd48a544d9edc211bc3ff 247 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 8.5E-32 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AVL55_05925 24128a1c28ef0ff614be827f53fc5e7d 497 SUPERFAMILY SSF56954 10 486 9.29E-109 T 11-10-2018 AVL55_05925 24128a1c28ef0ff614be827f53fc5e7d 497 Pfam PF02321 Outer membrane efflux protein 300 481 5.9E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_05925 24128a1c28ef0ff614be827f53fc5e7d 497 Pfam PF02321 Outer membrane efflux protein 78 268 1.4E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_05925 24128a1c28ef0ff614be827f53fc5e7d 497 Gene3D G3DSA:1.20.1600.10 69 483 5.1E-134 T 11-10-2018 AVL55_05925 24128a1c28ef0ff614be827f53fc5e7d 497 Gene3D G3DSA:2.20.200.10 115 372 5.1E-134 T 11-10-2018 AVL55_05925 24128a1c28ef0ff614be827f53fc5e7d 497 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 483 3.3E-125 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AVL55_14690 2c2e0c27405d833becbdd61452d60265 189 Pfam PF04203 Sortase family 70 180 3.9E-17 T 11-10-2018 IPR005754 Sortase family AVL55_14690 2c2e0c27405d833becbdd61452d60265 189 TIGRFAM TIGR03784 marine_sortase: sortase, marine proteobacterial type 10 180 1.2E-59 T 11-10-2018 IPR022445 Sortase, proteobacterial type AVL55_14690 2c2e0c27405d833becbdd61452d60265 189 SUPERFAMILY SSF63817 58 177 5.62E-18 T 11-10-2018 IPR023365 Sortase domain superfamily AVL55_14690 2c2e0c27405d833becbdd61452d60265 189 TIGRFAM TIGR01076 sortase_fam: sortase 69 174 4.2E-11 T 11-10-2018 IPR005754 Sortase family AVL55_14690 2c2e0c27405d833becbdd61452d60265 189 Gene3D G3DSA:2.40.260.10 36 189 1.4E-20 T 11-10-2018 IPR023365 Sortase domain superfamily AVL55_14265 d3b9623314720179eb3bed332e33585b 299 Gene3D G3DSA:3.40.190.10 23 92 3.0E-15 T 11-10-2018 AVL55_14265 d3b9623314720179eb3bed332e33585b 299 Gene3D G3DSA:3.40.190.10 143 243 1.4E-5 T 11-10-2018 AVL55_14265 d3b9623314720179eb3bed332e33585b 299 Gene3D G3DSA:3.40.190.10 133 282 1.4E-5 T 11-10-2018 AVL55_14265 d3b9623314720179eb3bed332e33585b 299 SUPERFAMILY SSF53850 27 282 1.52E-26 T 11-10-2018 AVL55_14265 d3b9623314720179eb3bed332e33585b 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 82 4.8E-10 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_14265 d3b9623314720179eb3bed332e33585b 299 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AVL55_14265 d3b9623314720179eb3bed332e33585b 299 SMART SM00062 36 286 0.002 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_10870 b4cf7a0874a78019f6975b6f626a813e 487 Gene3D G3DSA:3.40.640.10 102 368 6.2E-71 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_10870 b4cf7a0874a78019f6975b6f626a813e 487 Gene3D G3DSA:3.90.1150.10 57 483 6.2E-71 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_10870 b4cf7a0874a78019f6975b6f626a813e 487 Pfam PF00155 Aminotransferase class I and II 96 483 6.3E-27 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_10870 b4cf7a0874a78019f6975b6f626a813e 487 SUPERFAMILY SSF53383 55 483 1.14E-59 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_14385 e3618a1ff5efd81674a39d5c8e792e8a 357 Gene3D G3DSA:1.10.4080.10 84 356 2.5E-16 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AVL55_14385 e3618a1ff5efd81674a39d5c8e792e8a 357 SUPERFAMILY SSF101478 99 354 7.06E-17 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AVL55_14385 e3618a1ff5efd81674a39d5c8e792e8a 357 Pfam PF03747 ADP-ribosylglycohydrolase 12 329 2.4E-44 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 AVL55_09585 ea171409bab85a63daeeba9ffdae569d 115 PIRSF PIRSF000169 1 115 6.6E-37 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AVL55_09585 ea171409bab85a63daeeba9ffdae569d 115 SUPERFAMILY SSF81343 5 115 2.01E-25 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09585 ea171409bab85a63daeeba9ffdae569d 115 Gene3D G3DSA:1.20.1300.10 1 115 7.0E-26 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AVL55_09585 ea171409bab85a63daeeba9ffdae569d 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 1.9E-29 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 Pfam PF17391 Urocanase N-terminal domain 10 136 3.6E-62 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 SUPERFAMILY SSF111326 3 553 2.22E-260 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 Gene3D G3DSA:3.40.1770.10 15 540 5.1E-259 T 11-10-2018 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 ProSitePatterns PS01233 Urocanase signature. 440 455 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 Pfam PF17392 Urocanase C-terminal domain 350 543 1.5E-92 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 Pfam PF01175 Urocanase Rossmann-like domain 139 347 4.4E-85 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 Gene3D G3DSA:3.40.50.10730 140 347 5.1E-259 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 PIRSF PIRSF001423 1 559 1.1E-293 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 TIGRFAM TIGR01228 hutU: urocanate hydratase 8 552 3.2E-294 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_04150 f953aa4b1c46c0b3a9781670aa763183 579 Hamap MF_00577 Urocanate hydratase [hutU]. 1 554 50.051 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 405 9.5E-33 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 PIRSF PIRSF001529 1 431 6.2E-177 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 SUPERFAMILY SSF46589 1 112 4.66E-30 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 Gene3D G3DSA:3.30.930.10 105 432 3.1E-113 T 11-10-2018 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 1.8E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 1.8E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 1.8E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 1.8E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 1.8E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 1.9E-169 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 SUPERFAMILY SSF55681 116 428 4.97E-99 T 11-10-2018 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 Gene3D G3DSA:1.10.287.40 1 104 5.1E-19 T 11-10-2018 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.2E-30 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AVL55_10955 158c8dd48c4230bfc776f289f8362417 433 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 40.569 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AVL55_15080 a5ee90087f5b9f2cdbee7511eecb4bbc 267 Pfam PF04338 Protein of unknown function, DUF481 53 266 1.4E-47 T 11-10-2018 IPR007433 Protein of unknown function DUF481 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 Gene3D G3DSA:3.40.30.10 5 118 1.1E-33 T 11-10-2018 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 Pfam PF14559 Tetratricopeptide repeat 131 197 1.3E-18 T 11-10-2018 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 PRINTS PR00421 Thioredoxin family signature 81 92 1.9E-5 T 11-10-2018 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 PRINTS PR00421 Thioredoxin family signature 41 50 1.9E-5 T 11-10-2018 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 PRINTS PR00421 Thioredoxin family signature 33 41 1.9E-5 T 11-10-2018 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 SUPERFAMILY SSF48452 116 250 2.9E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 Gene3D G3DSA:1.25.40.10 204 289 4.3E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 Pfam PF14561 Tetratricopeptide repeat 202 289 1.6E-24 T 11-10-2018 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 Pfam PF00085 Thioredoxin 13 115 1.6E-27 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 TIGRFAM TIGR01068 thioredoxin: thioredoxin 17 115 1.3E-31 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 SUPERFAMILY SSF52833 10 119 1.52E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 ProSitePatterns PS00194 Thioredoxin family active site. 34 52 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AVL55_02275 4ea04b56809244458736be62ffa24cf9 289 Gene3D G3DSA:1.25.40.10 119 203 1.1E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_07820 45bd68b545a134c0aa5bf9f1c1599902 431 Gene3D G3DSA:2.60.120.10 268 397 7.9E-64 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_07820 45bd68b545a134c0aa5bf9f1c1599902 431 Pfam PF04209 homogentisate 1,2-dioxygenase 5 425 2.1E-202 T 11-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AVL55_07820 45bd68b545a134c0aa5bf9f1c1599902 431 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 4 426 1.6E-202 T 11-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AVL55_07820 45bd68b545a134c0aa5bf9f1c1599902 431 SUPERFAMILY SSF51182 4 429 3.86E-160 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_17230 b504abc1e64de371ca4529febbabcc48 350 Gene3D G3DSA:1.10.287.470 99 185 1.2E-26 T 11-10-2018 AVL55_17230 b504abc1e64de371ca4529febbabcc48 350 SUPERFAMILY SSF111369 68 172 7.98E-9 T 11-10-2018 AVL55_17230 b504abc1e64de371ca4529febbabcc48 350 Gene3D G3DSA:2.40.50.100 65 222 1.2E-26 T 11-10-2018 AVL55_17230 b504abc1e64de371ca4529febbabcc48 350 Pfam PF13437 HlyD family secretion protein 187 253 1.2E-5 T 11-10-2018 AVL55_17230 b504abc1e64de371ca4529febbabcc48 350 Gene3D G3DSA:2.40.30.170 223 279 1.2E-26 T 11-10-2018 AVL55_17230 b504abc1e64de371ca4529febbabcc48 350 Pfam PF13533 Biotin-lipoyl like 66 106 5.9E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AVL55_16305 ffc5f45435ab53821d87543e2778b546 268 Gene3D G3DSA:1.10.3720.10 7 261 7.9E-52 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_16305 ffc5f45435ab53821d87543e2778b546 268 SUPERFAMILY SSF161098 11 267 1.2E-60 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_16305 ffc5f45435ab53821d87543e2778b546 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 258 2.3E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_19410 4af4e563a9450265d143e8b171f5e579 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 193 5.4E-10 T 11-10-2018 AVL55_19410 4af4e563a9450265d143e8b171f5e579 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 191 1.5E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_19410 4af4e563a9450265d143e8b171f5e579 237 Gene3D G3DSA:3.40.50.1000 8 205 1.1E-21 T 11-10-2018 IPR023214 HAD superfamily AVL55_19410 4af4e563a9450265d143e8b171f5e579 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 2.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_19410 4af4e563a9450265d143e8b171f5e579 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 2.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_19410 4af4e563a9450265d143e8b171f5e579 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 2.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_19410 4af4e563a9450265d143e8b171f5e579 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 2.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_19410 4af4e563a9450265d143e8b171f5e579 237 SUPERFAMILY SSF56784 5 217 2.71E-39 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_10045 fb17f39cb2c99ad2d502702b121166ec 174 Gene3D G3DSA:2.160.10.10 2 172 2.3E-63 T 11-10-2018 AVL55_10045 fb17f39cb2c99ad2d502702b121166ec 174 SUPERFAMILY SSF51161 6 168 2.63E-49 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_10045 fb17f39cb2c99ad2d502702b121166ec 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 2.7E-10 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_07070 5a479ecbf1e11c6680e0794c04f83d19 325 Pfam PF01032 FecCD transport family 11 320 3.8E-73 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AVL55_07070 5a479ecbf1e11c6680e0794c04f83d19 325 Gene3D G3DSA:1.10.3470.10 4 324 4.1E-81 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AVL55_07070 5a479ecbf1e11c6680e0794c04f83d19 325 SUPERFAMILY SSF81345 9 320 1.83E-65 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AVL55_05435 e6ff07250e398075e48e07f780196548 155 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 8.9E-20 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AVL55_05435 e6ff07250e398075e48e07f780196548 155 Gene3D G3DSA:3.30.70.920 56 140 4.3E-25 T 11-10-2018 AVL55_05435 e6ff07250e398075e48e07f780196548 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AVL55_05435 e6ff07250e398075e48e07f780196548 155 Gene3D G3DSA:1.10.10.10 4 55 5.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_05435 e6ff07250e398075e48e07f780196548 155 SUPERFAMILY SSF46785 2 61 2.62E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_05435 e6ff07250e398075e48e07f780196548 155 SMART SM00344 3 112 4.1E-45 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AVL55_05435 e6ff07250e398075e48e07f780196548 155 SUPERFAMILY SSF54909 63 152 4.16E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_05435 e6ff07250e398075e48e07f780196548 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 1.3E-18 T 11-10-2018 AVL55_05435 e6ff07250e398075e48e07f780196548 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 4.7E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_05435 e6ff07250e398075e48e07f780196548 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 4.7E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_05435 e6ff07250e398075e48e07f780196548 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 4.7E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AVL55_18390 71f98cb732f948f16861477ae08a544f 886 PIRSF PIRSF037307 2 873 1.1E-180 T 11-10-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 AVL55_18390 71f98cb732f948f16861477ae08a544f 886 Pfam PF08494 DEAD/H associated 656 839 2.4E-38 T 11-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AVL55_18390 71f98cb732f948f16861477ae08a544f 886 Pfam PF00270 DEAD/DEAH box helicase 33 256 2.7E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AVL55_18390 71f98cb732f948f16861477ae08a544f 886 Pfam PF00271 Helicase conserved C-terminal domain 306 409 1.3E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_18390 71f98cb732f948f16861477ae08a544f 886 Gene3D G3DSA:3.40.50.300 300 442 5.7E-26 T 11-10-2018 AVL55_18390 71f98cb732f948f16861477ae08a544f 886 SMART SM00490 329 414 2.2E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AVL55_18390 71f98cb732f948f16861477ae08a544f 886 SUPERFAMILY SSF52540 132 412 1.33E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18390 71f98cb732f948f16861477ae08a544f 886 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 124 864 7.4E-292 T 11-10-2018 IPR026362 DEXH box helicase, DNA ligase-associated AVL55_18390 71f98cb732f948f16861477ae08a544f 886 SMART SM00487 15 288 2.2E-24 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AVL55_03770 d739f8a33a9ed809082825450707100c 854 Pfam PF02384 N-6 DNA Methylase 164 472 8.4E-101 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AVL55_03770 d739f8a33a9ed809082825450707100c 854 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 288 300 6.8E-21 T 11-10-2018 AVL55_03770 d739f8a33a9ed809082825450707100c 854 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 322 346 6.8E-21 T 11-10-2018 AVL55_03770 d739f8a33a9ed809082825450707100c 854 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 202 6.8E-21 T 11-10-2018 AVL55_03770 d739f8a33a9ed809082825450707100c 854 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 6.8E-21 T 11-10-2018 AVL55_03770 d739f8a33a9ed809082825450707100c 854 Pfam PF12161 HsdM N-terminal domain 10 148 7.3E-28 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AVL55_03770 d739f8a33a9ed809082825450707100c 854 Gene3D G3DSA:3.40.50.150 163 460 3.6E-95 T 11-10-2018 AVL55_03770 d739f8a33a9ed809082825450707100c 854 Gene3D G3DSA:1.20.1260.30 1 151 8.3E-29 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AVL55_03770 d739f8a33a9ed809082825450707100c 854 SUPERFAMILY SSF53335 8 513 8.47E-130 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_08115 8f38a85c82097ac60104b4a36bd48450 484 SUPERFAMILY SSF51735 164 286 1.77E-7 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_08115 8f38a85c82097ac60104b4a36bd48450 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 43 484 4.2E-165 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AVL55_08115 8f38a85c82097ac60104b4a36bd48450 484 Pfam PF13727 CoA-binding domain 81 258 2.3E-40 T 11-10-2018 AVL55_08115 8f38a85c82097ac60104b4a36bd48450 484 Pfam PF02397 Bacterial sugar transferase 294 476 4.9E-64 T 11-10-2018 IPR003362 Bacterial sugar transferase AVL55_08115 8f38a85c82097ac60104b4a36bd48450 484 Gene3D G3DSA:3.40.50.720 159 283 9.6E-17 T 11-10-2018 AVL55_08115 8f38a85c82097ac60104b4a36bd48450 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 41 484 1.2E-148 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AVL55_09730 3532fc138d12f5a89401a73e90ace5c5 346 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 134 321 6.1E-56 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AVL55_09730 3532fc138d12f5a89401a73e90ace5c5 346 Gene3D G3DSA:3.40.50.720 126 321 3.4E-130 T 11-10-2018 AVL55_09730 3532fc138d12f5a89401a73e90ace5c5 346 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 341 1.0E-27 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AVL55_09730 3532fc138d12f5a89401a73e90ace5c5 346 SUPERFAMILY SSF51735 126 322 4.4E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09730 3532fc138d12f5a89401a73e90ace5c5 346 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 247 263 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AVL55_09730 3532fc138d12f5a89401a73e90ace5c5 346 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 171 198 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AVL55_09730 3532fc138d12f5a89401a73e90ace5c5 346 SUPERFAMILY SSF52283 20 158 1.47E-36 T 11-10-2018 AVL55_09730 3532fc138d12f5a89401a73e90ace5c5 346 Gene3D G3DSA:3.40.50.720 21 339 3.4E-130 T 11-10-2018 AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 SUPERFAMILY SSF48019 242 423 1.87E-70 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 Pfam PF16193 AAA C-terminal domain 184 257 1.6E-23 T 11-10-2018 IPR032423 AAA C-terminal domain AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 Gene3D G3DSA:1.10.8.60 160 230 1.6E-14 T 11-10-2018 AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 Pfam PF12002 MgsA AAA+ ATPase C terminal 258 421 4.1E-63 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 48 155 2.4E-16 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 Gene3D G3DSA:1.20.272.10 231 335 1.3E-41 T 11-10-2018 AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 Gene3D G3DSA:1.10.3710.10 336 435 2.3E-35 T 11-10-2018 AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 SMART SM00382 44 160 1.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 SUPERFAMILY SSF52540 6 235 3.19E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_10965 1e9e8676d7d877bc67489d7598f4ebfe 435 Gene3D G3DSA:3.40.50.300 1 159 2.3E-45 T 11-10-2018 AVL55_08500 16f18aa6d30f15bc5421ffab47eea186 100 Pfam PF07238 PilZ domain 7 98 2.3E-13 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AVL55_08500 16f18aa6d30f15bc5421ffab47eea186 100 Gene3D G3DSA:2.40.10.220 4 100 1.5E-11 T 11-10-2018 AVL55_08500 16f18aa6d30f15bc5421ffab47eea186 100 SUPERFAMILY SSF141371 2 96 4.12E-11 T 11-10-2018 AVL55_09655 8e27b5e47f779ff7c51c774265778bb8 298 SUPERFAMILY SSF55729 43 248 1.7E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_09655 8e27b5e47f779ff7c51c774265778bb8 298 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 40 264 3.5E-52 T 11-10-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted AVL55_09655 8e27b5e47f779ff7c51c774265778bb8 298 Pfam PF13444 Acetyltransferase (GNAT) domain 62 160 9.5E-14 T 11-10-2018 AVL55_09655 8e27b5e47f779ff7c51c774265778bb8 298 Gene3D G3DSA:3.40.630.30 48 262 2.5E-41 T 11-10-2018 AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 SUPERFAMILY SSF51735 8 236 1.44E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 Gene3D G3DSA:3.40.50.720 6 250 6.8E-67 T 11-10-2018 AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 Pfam PF00106 short chain dehydrogenase 12 204 1.3E-51 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 9.2E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 9.2E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.2E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 9.2E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 9.2E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 196 3.5E-6 T 11-10-2018 AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09870 729ddf4ca3e4b7a1bf11ab9ffe374ca7 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09015 1e5344446a5b9384ff267b065c5f70e8 115 SUPERFAMILY SSF54285 5 80 1.05E-25 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AVL55_09015 1e5344446a5b9384ff267b065c5f70e8 115 Pfam PF03658 RnfH family Ubiquitin 6 88 5.9E-34 T 11-10-2018 IPR005346 RnfH protein AVL55_09015 1e5344446a5b9384ff267b065c5f70e8 115 Gene3D G3DSA:3.10.20.280 1 90 1.3E-32 T 11-10-2018 IPR037021 RnfH superfamily AVL55_09015 1e5344446a5b9384ff267b065c5f70e8 115 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 25.241 T 11-10-2018 IPR005346 RnfH protein AVL55_13195 5cda7d6f7d6bd739f306e766c4d28971 267 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AVL55_13195 5cda7d6f7d6bd739f306e766c4d28971 267 Gene3D G3DSA:1.20.120.1760 7 147 2.6E-16 T 11-10-2018 AVL55_13195 5cda7d6f7d6bd739f306e766c4d28971 267 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 75 1.3E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AVL55_13195 5cda7d6f7d6bd739f306e766c4d28971 267 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 19 179 3.2E-36 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 PIRSF PIRSF000429 1 387 1.5E-125 T 11-10-2018 IPR002155 Thiolase GO:0016747 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 2.2E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 Gene3D G3DSA:3.40.47.10 4 267 2.6E-145 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 SUPERFAMILY SSF53901 262 386 6.22E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 SUPERFAMILY SSF53901 1 259 2.31E-75 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 Gene3D G3DSA:3.40.47.10 134 381 2.6E-145 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.9E-135 T 11-10-2018 IPR002155 Thiolase GO:0016747 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 2.6E-209 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.888 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AVL55_02520 11db61da15bd51f3b27d2b8297e2820b 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 6.2E-77 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 191 84.302 T 11-10-2018 IPR017757 Transcriptional repressor BetI AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 77 186 5.4E-22 T 11-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.1E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 184 1.9E-63 T 11-10-2018 IPR017757 Transcriptional repressor BetI AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 SUPERFAMILY SSF48498 76 185 4.0E-10 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 Gene3D G3DSA:1.10.357.10 6 191 5.1E-34 T 11-10-2018 AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 SUPERFAMILY SSF46689 6 68 1.39E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_05305 aefcebe4a96e79c19d1d444fcfc45713 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_13230 351123d95951fcf637f0b863b58e8e3c 375 SUPERFAMILY SSF56935 36 375 5.04E-16 T 11-10-2018 AVL55_02550 491a3694cc4104ce969bfb864f3dee77 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.1E-44 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02550 491a3694cc4104ce969bfb864f3dee77 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.003 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02550 491a3694cc4104ce969bfb864f3dee77 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.7E-39 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02550 491a3694cc4104ce969bfb864f3dee77 103 SUPERFAMILY SSF141091 1 102 1.44E-38 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_02550 491a3694cc4104ce969bfb864f3dee77 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 Pfam PF13360 PQQ-like domain 468 536 1.9E-6 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 Pfam PF13360 PQQ-like domain 68 229 4.1E-18 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 SMART SM00564 179 216 0.0076 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 SMART SM00564 443 485 0.22 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 SMART SM00564 494 526 13.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 SMART SM00564 85 116 2.0E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 SMART SM00564 262 310 23.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 SMART SM00564 133 165 9.2E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 Gene3D G3DSA:2.140.10.10 22 584 3.2E-208 T 11-10-2018 AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 22 554 5.0E-236 T 11-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 AVL55_14270 57c006db6e3f134961e864a27253c3b7 591 SUPERFAMILY SSF50998 32 577 7.06E-158 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AVL55_15040 79bb652bd2cc96d2e126d092212495e1 298 PRINTS PR00990 Ribokinase signature 32 51 1.8E-27 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AVL55_15040 79bb652bd2cc96d2e126d092212495e1 298 PRINTS PR00990 Ribokinase signature 168 183 1.8E-27 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AVL55_15040 79bb652bd2cc96d2e126d092212495e1 298 PRINTS PR00990 Ribokinase signature 101 114 1.8E-27 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AVL55_15040 79bb652bd2cc96d2e126d092212495e1 298 PRINTS PR00990 Ribokinase signature 5 26 1.8E-27 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AVL55_15040 79bb652bd2cc96d2e126d092212495e1 298 PRINTS PR00990 Ribokinase signature 208 219 1.8E-27 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AVL55_15040 79bb652bd2cc96d2e126d092212495e1 298 Gene3D G3DSA:3.40.1190.20 1 298 1.4E-82 T 11-10-2018 IPR029056 Ribokinase-like AVL55_15040 79bb652bd2cc96d2e126d092212495e1 298 Hamap MF_01987 Ribokinase [rbsK]. 1 292 20.897 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AVL55_15040 79bb652bd2cc96d2e126d092212495e1 298 SUPERFAMILY SSF53613 1 293 1.25E-68 T 11-10-2018 IPR029056 Ribokinase-like AVL55_15040 79bb652bd2cc96d2e126d092212495e1 298 Pfam PF00294 pfkB family carbohydrate kinase 6 285 2.9E-47 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AVL55_08290 dc6c87c2848b6ec4d3f6e7794eea926a 171 Gene3D G3DSA:1.20.1200.10 17 171 3.5E-52 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AVL55_08290 dc6c87c2848b6ec4d3f6e7794eea926a 171 SUPERFAMILY SSF89028 1 169 5.1E-54 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AVL55_08290 dc6c87c2848b6ec4d3f6e7794eea926a 171 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 169 6.0E-20 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AVL55_08290 dc6c87c2848b6ec4d3f6e7794eea926a 171 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 168 1.1E-52 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AVL55_08290 dc6c87c2848b6ec4d3f6e7794eea926a 171 Pfam PF01923 Cobalamin adenosyltransferase 3 159 7.5E-54 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AVL55_13550 bd01dacdc4a96c7ca7f72b0e8952c917 314 Gene3D G3DSA:3.40.1010.20 6 282 5.5E-111 T 11-10-2018 AVL55_13550 bd01dacdc4a96c7ca7f72b0e8952c917 314 Gene3D G3DSA:3.40.50.11270 12 96 5.5E-111 T 11-10-2018 AVL55_13550 bd01dacdc4a96c7ca7f72b0e8952c917 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 4.2E-99 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AVL55_13550 bd01dacdc4a96c7ca7f72b0e8952c917 314 Pfam PF02401 LytB protein 3 283 4.6E-92 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AVL55_13550 bd01dacdc4a96c7ca7f72b0e8952c917 314 Gene3D G3DSA:3.40.1010.20 97 196 5.5E-111 T 11-10-2018 AVL55_13550 bd01dacdc4a96c7ca7f72b0e8952c917 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 37.174 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AVL55_13280 b115b8701e959989c9e1733707c7ea01 239 SUPERFAMILY SSF51735 2 232 1.45E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_13280 b115b8701e959989c9e1733707c7ea01 239 Gene3D G3DSA:3.40.50.720 1 237 3.0E-56 T 11-10-2018 AVL55_13280 b115b8701e959989c9e1733707c7ea01 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 7.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13280 b115b8701e959989c9e1733707c7ea01 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 7.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13280 b115b8701e959989c9e1733707c7ea01 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 7.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13280 b115b8701e959989c9e1733707c7ea01 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13280 b115b8701e959989c9e1733707c7ea01 239 Pfam PF00106 short chain dehydrogenase 2 179 4.5E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_03170 042a3f812662250bd17c56e2f1867313 396 Pfam PF03594 Benzoate membrane transport protein 3 387 1.8E-115 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AVL55_03170 042a3f812662250bd17c56e2f1867313 396 TIGRFAM TIGR00843 benE: benzoate transporter 9 387 9.9E-89 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AVL55_08910 cdf3609c78f1318161fbaed7310dbbde 440 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 21 120 2.8E-26 T 11-10-2018 IPR018721 Protein of unknown function DUF2252 AVL55_08910 cdf3609c78f1318161fbaed7310dbbde 440 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 206 438 3.3E-22 T 11-10-2018 IPR018721 Protein of unknown function DUF2252 AVL55_11010 3209b798847706adecb657713d6d405c 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.4E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_11010 3209b798847706adecb657713d6d405c 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.4E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_11010 3209b798847706adecb657713d6d405c 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.4E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_11010 3209b798847706adecb657713d6d405c 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AVL55_11010 3209b798847706adecb657713d6d405c 95 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.7E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_11010 3209b798847706adecb657713d6d405c 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.893 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AVL55_11010 3209b798847706adecb657713d6d405c 95 Gene3D G3DSA:4.10.520.10 40 91 5.5E-27 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AVL55_11010 3209b798847706adecb657713d6d405c 95 Gene3D G3DSA:4.10.520.10 2 39 4.4E-10 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AVL55_11010 3209b798847706adecb657713d6d405c 95 SMART SM00411 1 91 4.8E-42 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AVL55_11010 3209b798847706adecb657713d6d405c 95 SUPERFAMILY SSF47729 1 91 2.65E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AVL55_11010 3209b798847706adecb657713d6d405c 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 2.5E-47 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AVL55_04850 a4d4601897fe94b7e71397c62f13aebc 144 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 139 2.1E-32 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AVL55_04850 a4d4601897fe94b7e71397c62f13aebc 144 PIRSF PIRSF002889 1 142 2.5E-35 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AVL55_04850 a4d4601897fe94b7e71397c62f13aebc 144 Pfam PF00460 Flagella basal body rod protein 13 39 5.6E-8 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AVL55_03540 c29e82aeea53f29882028df2db941ae8 147 Gene3D G3DSA:3.40.930.10 1 147 3.2E-48 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AVL55_03540 c29e82aeea53f29882028df2db941ae8 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 146 1.6E-35 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AVL55_03540 c29e82aeea53f29882028df2db941ae8 147 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 6 143 8.7E-44 T 11-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AVL55_03540 c29e82aeea53f29882028df2db941ae8 147 SUPERFAMILY SSF55804 1 146 2.49E-35 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AVL55_03540 c29e82aeea53f29882028df2db941ae8 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AVL55_09075 4680018ad533595faf4672ec384b40df 388 Pfam PF08007 Cupin superfamily protein 21 285 6.1E-76 T 11-10-2018 IPR003347 JmjC domain AVL55_09075 4680018ad533595faf4672ec384b40df 388 Gene3D G3DSA:1.10.10.2510 216 387 5.7E-16 T 11-10-2018 AVL55_09075 4680018ad533595faf4672ec384b40df 388 SMART SM00558 103 230 2.3E-10 T 11-10-2018 IPR003347 JmjC domain AVL55_09075 4680018ad533595faf4672ec384b40df 388 Gene3D G3DSA:2.60.120.650 16 215 3.1E-77 T 11-10-2018 AVL55_09075 4680018ad533595faf4672ec384b40df 388 SUPERFAMILY SSF51197 16 289 1.79E-69 T 11-10-2018 AVL55_14420 87f9bc85d34fa7ac247e37a323639db3 133 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 52 124 1.6E-14 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AVL55_14420 87f9bc85d34fa7ac247e37a323639db3 133 Gene3D G3DSA:3.10.50.30 46 129 8.0E-19 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AVL55_14420 87f9bc85d34fa7ac247e37a323639db3 133 SUPERFAMILY SSF54534 51 124 5.1E-14 T 11-10-2018 AVL55_14420 87f9bc85d34fa7ac247e37a323639db3 133 PIRSF PIRSF006092 11 126 3.7E-21 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AVL55_14640 bb36e7ac9e4d4d8f8f1877f0b1408c87 535 SUPERFAMILY SSF53850 29 529 1.07E-101 T 11-10-2018 AVL55_14640 bb36e7ac9e4d4d8f8f1877f0b1408c87 535 Gene3D G3DSA:3.40.190.10 19 258 6.0E-49 T 11-10-2018 AVL55_14640 bb36e7ac9e4d4d8f8f1877f0b1408c87 535 PIRSF PIRSF002741 21 533 9.5E-70 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AVL55_14640 bb36e7ac9e4d4d8f8f1877f0b1408c87 535 Gene3D G3DSA:3.10.105.10 259 505 1.3E-40 T 11-10-2018 AVL55_14640 bb36e7ac9e4d4d8f8f1877f0b1408c87 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 449 4.5E-71 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AVL55_00870 e753301581c4efaf7ed48a9e87877ee7 210 Pfam PF02441 Flavoprotein 5 181 4.7E-24 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AVL55_00870 e753301581c4efaf7ed48a9e87877ee7 210 SUPERFAMILY SSF52507 5 201 1.57E-57 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AVL55_00870 e753301581c4efaf7ed48a9e87877ee7 210 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 200 2.5E-57 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AVL55_00870 e753301581c4efaf7ed48a9e87877ee7 210 Gene3D G3DSA:3.40.50.1950 1 203 1.8E-78 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AVL55_00870 e753301581c4efaf7ed48a9e87877ee7 210 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 34.402 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AVL55_00605 87fa8325db11fe999d16bddd5bd2ee4e 344 Gene3D G3DSA:3.40.190.10 142 325 2.1E-68 T 11-10-2018 AVL55_00605 87fa8325db11fe999d16bddd5bd2ee4e 344 PIRSF PIRSF002825 1 344 5.9E-83 T 11-10-2018 IPR026045 Ferric binding protein AVL55_00605 87fa8325db11fe999d16bddd5bd2ee4e 344 Pfam PF13343 Bacterial extracellular solute-binding protein 98 310 5.1E-12 T 11-10-2018 AVL55_00605 87fa8325db11fe999d16bddd5bd2ee4e 344 SUPERFAMILY SSF53850 44 332 1.45E-46 T 11-10-2018 AVL55_00605 87fa8325db11fe999d16bddd5bd2ee4e 344 Gene3D G3DSA:3.40.190.10 45 313 2.1E-68 T 11-10-2018 AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 649 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 669 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 675 688 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 688 6.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 SMART SM00387 581 690 3.7E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 6 688 4.9E-170 T 11-10-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 Gene3D G3DSA:1.10.287.130 484 540 4.0E-32 T 11-10-2018 AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 Gene3D G3DSA:3.30.565.10 541 688 4.0E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_15355 d4d616685c14f4e5d48bdff90140ec6b 690 SUPERFAMILY SSF55874 576 689 7.2E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_01810 4116df023a741bf07b376c5230c438aa 379 Gene3D G3DSA:2.40.30.170 62 290 5.4E-52 T 11-10-2018 AVL55_01810 4116df023a741bf07b376c5230c438aa 379 SUPERFAMILY SSF111369 66 235 7.59E-21 T 11-10-2018 AVL55_01810 4116df023a741bf07b376c5230c438aa 379 Gene3D G3DSA:2.40.50.100 75 221 5.4E-52 T 11-10-2018 AVL55_01810 4116df023a741bf07b376c5230c438aa 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 283 1.7E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_01810 4116df023a741bf07b376c5230c438aa 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 65 370 1.3E-55 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_01810 4116df023a741bf07b376c5230c438aa 379 Gene3D G3DSA:1.10.287.470 109 177 5.4E-52 T 11-10-2018 AVL55_01810 4116df023a741bf07b376c5230c438aa 379 Gene3D G3DSA:2.40.420.20 291 368 5.4E-52 T 11-10-2018 AVL55_16875 3da9b95238dbb0326f7e881e14fa5a7b 181 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 158 1.2E-62 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AVL55_16875 3da9b95238dbb0326f7e881e14fa5a7b 181 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 163 37.648 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AVL55_16875 3da9b95238dbb0326f7e881e14fa5a7b 181 Pfam PF01625 Peptide methionine sulfoxide reductase 7 159 6.9E-67 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AVL55_16875 3da9b95238dbb0326f7e881e14fa5a7b 181 SUPERFAMILY SSF55068 2 169 1.83E-74 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AVL55_16875 3da9b95238dbb0326f7e881e14fa5a7b 181 Gene3D G3DSA:3.30.1060.10 1 168 1.5E-72 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AVL55_08335 ae226694556ff00b1b2c0fb17a829c7d 239 SUPERFAMILY SSF48613 2 225 1.84E-16 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AVL55_16500 1e275282c1347ca45798831adcbbb1d9 253 Gene3D G3DSA:3.40.50.10610 32 124 2.9E-34 T 11-10-2018 AVL55_16500 1e275282c1347ca45798831adcbbb1d9 253 Gene3D G3DSA:3.40.50.10610 125 253 9.4E-48 T 11-10-2018 AVL55_16500 1e275282c1347ca45798831adcbbb1d9 253 Pfam PF03783 Curli production assembly/transport component CsgG 44 252 1.8E-78 T 11-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 AVL55_10735 5c02bb26f73abf14e9570b172f520701 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 10 465 3.7E-228 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AVL55_10735 5c02bb26f73abf14e9570b172f520701 477 SUPERFAMILY SSF81442 11 466 1.01E-122 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_10735 5c02bb26f73abf14e9570b172f520701 477 Gene3D G3DSA:1.20.210.10 4 474 1.0E-204 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_10735 5c02bb26f73abf14e9570b172f520701 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 14 444 1.3E-114 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_10735 5c02bb26f73abf14e9570b172f520701 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_04280 ded49ff782c2518764570eb4576e69cc 512 Pfam PF00665 Integrase core domain 137 268 2.3E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AVL55_04280 ded49ff782c2518764570eb4576e69cc 512 SUPERFAMILY SSF53098 161 301 1.63E-6 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_03225 6e12c2815e54eb01e075cc04b9ba59ff 454 Pfam PF01618 MotA/TolQ/ExbB proton channel family 320 440 4.4E-30 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AVL55_03225 6e12c2815e54eb01e075cc04b9ba59ff 454 PIRSF PIRSF037714 1 454 2.5E-168 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AVL55_01005 186e32e5ec1e7509798a86dd93bd4415 446 SUPERFAMILY SSF46626 38 260 6.88E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_01005 186e32e5ec1e7509798a86dd93bd4415 446 Gene3D G3DSA:1.10.760.10 47 135 1.6E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_01005 186e32e5ec1e7509798a86dd93bd4415 446 Gene3D G3DSA:1.10.760.10 265 415 1.3E-42 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_01005 186e32e5ec1e7509798a86dd93bd4415 446 Gene3D G3DSA:1.10.760.10 229 264 1.3E-42 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_01005 186e32e5ec1e7509798a86dd93bd4415 446 SUPERFAMILY SSF46626 256 412 5.02E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_01005 186e32e5ec1e7509798a86dd93bd4415 446 Pfam PF03150 Di-haem cytochrome c peroxidase 51 278 1.2E-26 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AVL55_07650 d8d884c0a1f9790075485000cd2e3ed2 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AVL55_07650 d8d884c0a1f9790075485000cd2e3ed2 279 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 278 1.2E-81 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AVL55_07650 d8d884c0a1f9790075485000cd2e3ed2 279 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 274 3.0E-91 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AVL55_07650 d8d884c0a1f9790075485000cd2e3ed2 279 Gene3D G3DSA:3.40.50.150 85 279 3.0E-62 T 11-10-2018 AVL55_07650 d8d884c0a1f9790075485000cd2e3ed2 279 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 278 43.213 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AVL55_07650 d8d884c0a1f9790075485000cd2e3ed2 279 Gene3D G3DSA:1.10.8.10 1 83 3.3E-21 T 11-10-2018 AVL55_07650 d8d884c0a1f9790075485000cd2e3ed2 279 Pfam PF13847 Methyltransferase domain 112 241 8.3E-21 T 11-10-2018 IPR025714 Methyltransferase domain AVL55_07650 d8d884c0a1f9790075485000cd2e3ed2 279 SUPERFAMILY SSF53335 3 276 6.07E-60 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_14620 b5a47e075f7c7ac27a94e2fa84cc7817 216 Pfam PF07308 Protein of unknown function (DUF1456) 88 154 1.5E-22 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 AVL55_14620 b5a47e075f7c7ac27a94e2fa84cc7817 216 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 3.8E-21 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 AVL55_05165 db1c5a8797f31982aec890041afff531 150 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 97 4.2E-20 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AVL55_05165 db1c5a8797f31982aec890041afff531 150 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 130 3.9E-16 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AVL55_01600 3384878b26518a8d70f2a65252b5d94e 99 Pfam PF00276 Ribosomal protein L23 8 94 5.0E-33 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AVL55_01600 3384878b26518a8d70f2a65252b5d94e 99 SUPERFAMILY SSF54189 3 92 1.22E-32 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01600 3384878b26518a8d70f2a65252b5d94e 99 Gene3D G3DSA:3.30.70.330 1 99 1.6E-38 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AVL55_01600 3384878b26518a8d70f2a65252b5d94e 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.883 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AVL55_09090 c2aeab33e3ed2e9cf22e7808fa494c44 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 30 196 1.0E-45 T 11-10-2018 AVL55_09090 c2aeab33e3ed2e9cf22e7808fa494c44 208 SUPERFAMILY SSF101322 6 205 4.71E-72 T 11-10-2018 IPR035932 HflD-like superfamily AVL55_09090 c2aeab33e3ed2e9cf22e7808fa494c44 208 Pfam PF04356 Protein of unknown function (DUF489) 8 197 2.3E-76 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AVL55_09090 c2aeab33e3ed2e9cf22e7808fa494c44 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 34.483 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AVL55_09090 c2aeab33e3ed2e9cf22e7808fa494c44 208 Gene3D G3DSA:1.10.3890.10 4 208 7.9E-76 T 11-10-2018 IPR035932 HflD-like superfamily AVL55_07350 a9b92553f31dbd3121a4f72cd646b6ac 169 SUPERFAMILY SSF47240 4 161 6.9E-41 T 11-10-2018 IPR009078 Ferritin-like superfamily AVL55_07350 a9b92553f31dbd3121a4f72cd646b6ac 169 Gene3D G3DSA:1.20.1260.10 3 169 1.3E-50 T 11-10-2018 IPR012347 Ferritin-like AVL55_07350 a9b92553f31dbd3121a4f72cd646b6ac 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 43 59 5.1E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps AVL55_07350 a9b92553f31dbd3121a4f72cd646b6ac 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 67 83 5.1E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps AVL55_07350 a9b92553f31dbd3121a4f72cd646b6ac 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 138 156 5.1E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps AVL55_07350 a9b92553f31dbd3121a4f72cd646b6ac 169 PIRSF PIRSF005900 1 166 2.6E-48 T 11-10-2018 IPR002177 DNA-binding protein Dps AVL55_07350 a9b92553f31dbd3121a4f72cd646b6ac 169 ProSitePatterns PS00818 Dps protein family signature 1. 43 59 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AVL55_07350 a9b92553f31dbd3121a4f72cd646b6ac 169 Pfam PF00210 Ferritin-like domain 22 161 6.7E-26 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AVL55_13020 bf91541b22e5f46a25660ae5a3982078 359 SUPERFAMILY SSF53383 17 352 5.17E-68 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_13020 bf91541b22e5f46a25660ae5a3982078 359 Gene3D G3DSA:3.90.1150.10 8 345 1.6E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_13020 bf91541b22e5f46a25660ae5a3982078 359 Gene3D G3DSA:3.40.640.10 53 256 1.6E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_13020 bf91541b22e5f46a25660ae5a3982078 359 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 351 3.5E-107 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AVL55_13020 bf91541b22e5f46a25660ae5a3982078 359 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 353 52.211 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AVL55_13020 bf91541b22e5f46a25660ae5a3982078 359 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 209 218 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AVL55_13020 bf91541b22e5f46a25660ae5a3982078 359 Pfam PF00155 Aminotransferase class I and II 47 347 3.9E-54 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 Pfam PF01584 CheW-like domain 22 161 5.3E-32 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 Gene3D G3DSA:3.40.50.2300 184 316 1.4E-22 T 11-10-2018 AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 Gene3D G3DSA:2.30.30.40 24 153 1.1E-25 T 11-10-2018 AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 SUPERFAMILY SSF50341 17 162 2.75E-30 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 SMART SM00448 185 306 3.0E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 SUPERFAMILY SSF52172 184 312 5.69E-22 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 PIRSF PIRSF002867 2 313 1.1E-100 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 Pfam PF00072 Response regulator receiver domain 187 303 9.5E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 Gene3D G3DSA:2.40.50.180 40 159 1.1E-25 T 11-10-2018 AVL55_13960 930ab68b90c793f3e8ec3413eb5f5161 319 SMART SM00260 18 159 1.3E-18 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AVL55_19275 b272a35593ac317162ab56c83e781576 253 SUPERFAMILY SSF49344 31 252 4.71E-33 T 11-10-2018 AVL55_19275 b272a35593ac317162ab56c83e781576 253 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 38 119 4.0E-4 T 11-10-2018 AVL55_19275 b272a35593ac317162ab56c83e781576 253 Gene3D G3DSA:2.60.40.1190 33 252 7.5E-36 T 11-10-2018 AVL55_19275 b272a35593ac317162ab56c83e781576 253 Pfam PF06452 Carbohydrate family 9 binding domain-like 40 252 5.1E-49 T 11-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AVL55_06380 876ccc7d347b9b7df25cd52784616b0f 398 Gene3D G3DSA:3.20.20.190 86 391 2.4E-87 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AVL55_06380 876ccc7d347b9b7df25cd52784616b0f 398 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 92 386 2.0E-50 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AVL55_06380 876ccc7d347b9b7df25cd52784616b0f 398 SUPERFAMILY SSF51695 87 393 3.66E-66 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AVL55_09470 d7d4184922d4446366a9434a5efa4519 1179 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1170 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AVL55_09470 d7d4184922d4446366a9434a5efa4519 1179 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1163 1.2E-55 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AVL55_09470 d7d4184922d4446366a9434a5efa4519 1179 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1172 22.015 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AVL55_09470 d7d4184922d4446366a9434a5efa4519 1179 Gene3D G3DSA:3.40.50.300 937 1179 1.7E-45 T 11-10-2018 AVL55_09470 d7d4184922d4446366a9434a5efa4519 1179 Gene3D G3DSA:3.40.50.300 1 257 4.6E-54 T 11-10-2018 AVL55_09470 d7d4184922d4446366a9434a5efa4519 1179 SUPERFAMILY SSF57997 303 491 1.13E-5 T 11-10-2018 AVL55_09470 d7d4184922d4446366a9434a5efa4519 1179 SUPERFAMILY SSF52540 2 1155 8.74E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09470 d7d4184922d4446366a9434a5efa4519 1179 PIRSF PIRSF005719 1 1179 4.1E-245 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein AVL55_02750 4a5b98fb4e3b75d49d1d9f7c7aadf865 448 Gene3D G3DSA:1.20.1250.20 20 218 2.5E-10 T 11-10-2018 AVL55_02750 4a5b98fb4e3b75d49d1d9f7c7aadf865 448 Gene3D G3DSA:1.20.1250.20 247 446 4.1E-9 T 11-10-2018 AVL55_02750 4a5b98fb4e3b75d49d1d9f7c7aadf865 448 SUPERFAMILY SSF103473 25 444 2.22E-30 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_02750 4a5b98fb4e3b75d49d1d9f7c7aadf865 448 Pfam PF07690 Major Facilitator Superfamily 30 290 1.5E-9 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_01405 ec9bf3f43cf29dfaa58a7aa9361f90a5 221 Gene3D G3DSA:1.20.120.1630 6 208 2.0E-23 T 11-10-2018 AVL55_01405 ec9bf3f43cf29dfaa58a7aa9361f90a5 221 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 102 186 9.5E-8 T 11-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 AVL55_08310 a6fd066a07128f82d4c5303c4eead6fe 436 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 436 3.1E-113 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AVL55_08310 a6fd066a07128f82d4c5303c4eead6fe 436 Pfam PF12704 MacB-like periplasmic core domain 32 269 2.1E-17 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AVL55_08310 a6fd066a07128f82d4c5303c4eead6fe 436 Pfam PF02687 FtsX-like permease family 329 429 5.9E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AVL55_14930 7f8b923b65f77ab3d33aa2f5b69b5eda 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 3 231 4.7E-93 T 11-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE AVL55_14930 7f8b923b65f77ab3d33aa2f5b69b5eda 231 Gene3D G3DSA:3.40.50.300 1 230 5.7E-57 T 11-10-2018 AVL55_14930 7f8b923b65f77ab3d33aa2f5b69b5eda 231 SUPERFAMILY SSF52540 1 222 1.61E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14930 7f8b923b65f77ab3d33aa2f5b69b5eda 231 Pfam PF00005 ABC transporter 19 159 4.5E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_14930 7f8b923b65f77ab3d33aa2f5b69b5eda 231 SMART SM00382 26 218 3.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_00210 fab30a2e88dca6c4c24ac8a57ec6dc74 250 Pfam PF00154 recA bacterial DNA recombination protein 25 132 9.3E-5 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AVL55_00210 fab30a2e88dca6c4c24ac8a57ec6dc74 250 Gene3D G3DSA:3.40.50.300 50 156 2.0E-27 T 11-10-2018 AVL55_00210 fab30a2e88dca6c4c24ac8a57ec6dc74 250 SUPERFAMILY SSF52540 57 157 1.79E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17425 21bc8122ea2d3fb73d34d16f5f9e9f5f 374 Gene3D G3DSA:3.90.550.10 1 196 2.3E-5 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17425 21bc8122ea2d3fb73d34d16f5f9e9f5f 374 Pfam PF13704 Glycosyl transferase family 2 11 117 9.5E-11 T 11-10-2018 AVL55_04045 befad997be3096432d427d76497178e1 224 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 26 222 5.1E-62 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AVL55_04045 befad997be3096432d427d76497178e1 224 Pfam PF03006 Haemolysin-III related 23 216 2.9E-35 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AVL55_03560 a55fb1911526cab78102cdab1f3d49b0 184 Gene3D G3DSA:2.60.450.10 23 163 6.1E-37 T 11-10-2018 AVL55_03560 a55fb1911526cab78102cdab1f3d49b0 184 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 24 166 1.6E-41 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AVL55_03560 a55fb1911526cab78102cdab1f3d49b0 184 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 166 21.801 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AVL55_03560 a55fb1911526cab78102cdab1f3d49b0 184 Pfam PF03968 OstA-like protein 34 143 3.9E-22 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AVL55_14020 33780befe667d8af410d4452ea4f14bd 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 83 115 4.6E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_14020 33780befe667d8af410d4452ea4f14bd 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 143 171 6.3E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AVL55_14020 33780befe667d8af410d4452ea4f14bd 193 SUPERFAMILY SSF51161 15 192 3.19E-30 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AVL55_14020 33780befe667d8af410d4452ea4f14bd 193 Gene3D G3DSA:2.160.10.10 63 193 4.2E-32 T 11-10-2018 AVL55_17560 5f5946a4a76b2e2791e22146ef123c89 104 SMART SM00739 4 31 1.3E-4 T 11-10-2018 IPR005824 KOW AVL55_17560 5f5946a4a76b2e2791e22146ef123c89 104 Gene3D G3DSA:2.30.30.30 2 104 3.4E-41 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AVL55_17560 5f5946a4a76b2e2791e22146ef123c89 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 2.7E-41 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17560 5f5946a4a76b2e2791e22146ef123c89 104 Pfam PF00467 KOW motif 8 38 2.1E-7 T 11-10-2018 IPR005824 KOW AVL55_17560 5f5946a4a76b2e2791e22146ef123c89 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 102 5.5E-26 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17560 5f5946a4a76b2e2791e22146ef123c89 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_17560 5f5946a4a76b2e2791e22146ef123c89 104 SUPERFAMILY SSF50104 4 102 1.12E-36 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AVL55_17560 5f5946a4a76b2e2791e22146ef123c89 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 21.888 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_15150 a900147cc41a81dd778aa67488ce2216 284 Gene3D G3DSA:3.20.20.70 125 271 4.1E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_15150 a900147cc41a81dd778aa67488ce2216 284 SUPERFAMILY SSF54675 6 114 1.33E-30 T 11-10-2018 AVL55_15150 a900147cc41a81dd778aa67488ce2216 284 SUPERFAMILY SSF51690 117 281 3.57E-58 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AVL55_15150 a900147cc41a81dd778aa67488ce2216 284 Gene3D G3DSA:3.90.1170.20 8 280 4.1E-113 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AVL55_15150 a900147cc41a81dd778aa67488ce2216 284 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 13 281 4.7E-94 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AVL55_15150 a900147cc41a81dd778aa67488ce2216 284 PIRSF PIRSF006250 4 284 1.7E-99 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AVL55_15150 a900147cc41a81dd778aa67488ce2216 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 117 280 1.3E-57 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AVL55_15150 a900147cc41a81dd778aa67488ce2216 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 29 114 2.6E-27 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AVL55_01590 a77994e8bd89724e4c296e05af55a0c0 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 2.2E-90 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01590 a77994e8bd89724e4c296e05af55a0c0 212 Gene3D G3DSA:2.40.30.10 133 212 1.5E-17 T 11-10-2018 AVL55_01590 a77994e8bd89724e4c296e05af55a0c0 212 Pfam PF00297 Ribosomal protein L3 46 185 1.4E-15 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_01590 a77994e8bd89724e4c296e05af55a0c0 212 Gene3D G3DSA:2.40.50.620 33 99 2.6E-16 T 11-10-2018 AVL55_01590 a77994e8bd89724e4c296e05af55a0c0 212 SUPERFAMILY SSF50447 2 211 2.12E-81 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AVL55_01590 a77994e8bd89724e4c296e05af55a0c0 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site AVL55_01590 a77994e8bd89724e4c296e05af55a0c0 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 40.208 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_04735 97b545b25f21362921e447060aa635fd 171 Pfam PF03938 Outer membrane protein (OmpH-like) 13 166 1.7E-27 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AVL55_04735 97b545b25f21362921e447060aa635fd 171 SUPERFAMILY SSF111384 25 167 4.05E-32 T 11-10-2018 AVL55_04735 97b545b25f21362921e447060aa635fd 171 PIRSF PIRSF002094 1 171 8.8E-49 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AVL55_04735 97b545b25f21362921e447060aa635fd 171 Gene3D G3DSA:3.30.910.20 25 168 5.8E-40 T 11-10-2018 IPR024930 Skp domain superfamily AVL55_04735 97b545b25f21362921e447060aa635fd 171 SMART SM00935 14 168 1.0E-42 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 Gene3D G3DSA:1.10.230.10 222 320 2.1E-121 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 Gene3D G3DSA:1.10.580.10 30 353 2.1E-121 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 Pfam PF00285 Citrate synthase, C-terminal domain 9 355 9.4E-117 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 PIRSF PIRSF001369 1 374 1.1E-116 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 SUPERFAMILY SSF48256 9 365 4.58E-126 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 9 373 3.0E-157 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 PRINTS PR00143 Citrate synthase signature 249 269 1.1E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 PRINTS PR00143 Citrate synthase signature 124 137 1.1E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 PRINTS PR00143 Citrate synthase signature 174 189 1.1E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 PRINTS PR00143 Citrate synthase signature 306 322 1.1E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 PRINTS PR00143 Citrate synthase signature 326 340 1.1E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_15740 510030a5c75594e856f7e1e16bd40703 374 PRINTS PR00143 Citrate synthase signature 196 224 1.1E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AVL55_02445 3402a4a4cd7dec5e6b4d54bed83c4f07 95 Gene3D G3DSA:1.10.260.40 2 92 8.6E-34 T 11-10-2018 AVL55_02445 3402a4a4cd7dec5e6b4d54bed83c4f07 95 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 82 4.6E-33 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 AVL55_02445 3402a4a4cd7dec5e6b4d54bed83c4f07 95 Pfam PF01381 Helix-turn-helix 13 65 1.6E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_02445 3402a4a4cd7dec5e6b4d54bed83c4f07 95 SMART SM00530 12 68 1.3E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_02445 3402a4a4cd7dec5e6b4d54bed83c4f07 95 SUPERFAMILY SSF47413 8 90 2.5E-26 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_19625 80a9d22ba8b3c62eab496563816276ac 106 SUPERFAMILY SSF55781 1 76 1.2E-12 T 11-10-2018 AVL55_19625 80a9d22ba8b3c62eab496563816276ac 106 Gene3D G3DSA:3.30.450.40 1 78 1.1E-11 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_19625 80a9d22ba8b3c62eab496563816276ac 106 Pfam PF01590 GAF domain 2 65 5.4E-5 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_04275 5129fb8f23326cbfa402659d30c99408 111 Pfam PF00589 Phage integrase family 3 99 6.1E-18 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_04275 5129fb8f23326cbfa402659d30c99408 111 Gene3D G3DSA:1.10.443.10 1 111 2.7E-26 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_04275 5129fb8f23326cbfa402659d30c99408 111 SUPERFAMILY SSF56349 3 109 1.24E-26 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_09550 10b46a54b87a025b797f28f2a8391c7c 287 Pfam PF05726 Pirin C-terminal cupin domain 181 284 1.8E-26 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AVL55_09550 10b46a54b87a025b797f28f2a8391c7c 287 Gene3D G3DSA:2.60.120.10 22 281 3.4E-98 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_09550 10b46a54b87a025b797f28f2a8391c7c 287 SUPERFAMILY SSF51182 11 284 1.03E-83 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_09550 10b46a54b87a025b797f28f2a8391c7c 287 Gene3D G3DSA:2.60.120.10 148 255 3.4E-98 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_09550 10b46a54b87a025b797f28f2a8391c7c 287 PIRSF PIRSF006232 7 287 3.8E-95 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AVL55_09550 10b46a54b87a025b797f28f2a8391c7c 287 Pfam PF02678 Pirin 27 126 1.7E-36 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AVL55_02670 b29aea8daacfc61ac28495d5fc2e84d0 492 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 111 423 2.6E-31 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_02670 b29aea8daacfc61ac28495d5fc2e84d0 492 Gene3D G3DSA:2.40.50.100 135 282 4.5E-34 T 11-10-2018 AVL55_02670 b29aea8daacfc61ac28495d5fc2e84d0 492 Gene3D G3DSA:1.10.287.470 172 248 4.5E-34 T 11-10-2018 AVL55_02670 b29aea8daacfc61ac28495d5fc2e84d0 492 Gene3D G3DSA:2.40.420.20 380 405 4.5E-34 T 11-10-2018 AVL55_02670 b29aea8daacfc61ac28495d5fc2e84d0 492 SUPERFAMILY SSF111369 127 323 6.28E-18 T 11-10-2018 AVL55_02670 b29aea8daacfc61ac28495d5fc2e84d0 492 Gene3D G3DSA:2.40.30.170 128 379 4.5E-34 T 11-10-2018 AVL55_02670 b29aea8daacfc61ac28495d5fc2e84d0 492 Pfam PF13437 HlyD family secretion protein 252 319 3.1E-5 T 11-10-2018 AVL55_02015 e9ad7ef78c99380b3b645b1055c92ad8 136 SMART SM00851 17 110 4.6E-21 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AVL55_02015 e9ad7ef78c99380b3b645b1055c92ad8 136 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 4 123 32.749 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AVL55_02015 e9ad7ef78c99380b3b645b1055c92ad8 136 SUPERFAMILY SSF52335 3 130 1.76E-51 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AVL55_02015 e9ad7ef78c99380b3b645b1055c92ad8 136 Gene3D G3DSA:3.40.50.1380 1 136 1.1E-58 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AVL55_02015 e9ad7ef78c99380b3b645b1055c92ad8 136 Pfam PF02142 MGS-like domain 17 109 1.1E-15 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AVL55_02015 e9ad7ef78c99380b3b645b1055c92ad8 136 ProSitePatterns PS01335 Methylglyoxal synthase active site. 57 65 - T 11-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AVL55_02015 e9ad7ef78c99380b3b645b1055c92ad8 136 PIRSF PIRSF006614 1 135 4.0E-59 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AVL55_02015 e9ad7ef78c99380b3b645b1055c92ad8 136 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 5 124 1.2E-54 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AVL55_11040 b033ed736cec6aa4f58582f7fcdbffa5 234 SUPERFAMILY SSF53335 10 213 1.31E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_11040 b033ed736cec6aa4f58582f7fcdbffa5 234 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 227 2.3E-85 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AVL55_11040 b033ed736cec6aa4f58582f7fcdbffa5 234 Pfam PF13489 Methyltransferase domain 50 198 6.8E-24 T 11-10-2018 AVL55_11040 b033ed736cec6aa4f58582f7fcdbffa5 234 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 8 233 37.323 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AVL55_11040 b033ed736cec6aa4f58582f7fcdbffa5 234 Gene3D G3DSA:3.40.50.150 8 232 3.0E-75 T 11-10-2018 AVL55_16715 be1ad112ab304ae2d2249abd6f6e952b 375 PIRSF PIRSF000345 6 333 9.2E-102 T 11-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 AVL55_16715 be1ad112ab304ae2d2249abd6f6e952b 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 155 173 3.2E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AVL55_16715 be1ad112ab304ae2d2249abd6f6e952b 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 207 3.2E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AVL55_16715 be1ad112ab304ae2d2249abd6f6e952b 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 229 243 3.2E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AVL55_16715 be1ad112ab304ae2d2249abd6f6e952b 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 96 125 3.2E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AVL55_16715 be1ad112ab304ae2d2249abd6f6e952b 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 35 57 3.2E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AVL55_16715 be1ad112ab304ae2d2249abd6f6e952b 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 58 78 3.2E-35 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AVL55_16715 be1ad112ab304ae2d2249abd6f6e952b 375 Pfam PF00487 Fatty acid desaturase 40 260 2.4E-25 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AVL55_13800 083db0e6deafdb03037c3e4e58ea2705 177 Gene3D G3DSA:3.30.300.130 72 176 4.4E-34 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AVL55_13800 083db0e6deafdb03037c3e4e58ea2705 177 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 6 175 9.2E-76 T 11-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative AVL55_13800 083db0e6deafdb03037c3e4e58ea2705 177 Pfam PF01883 Iron-sulfur cluster assembly protein 79 153 3.7E-18 T 11-10-2018 IPR002744 MIP18 family-like AVL55_13800 083db0e6deafdb03037c3e4e58ea2705 177 SUPERFAMILY SSF117916 77 173 3.6E-30 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AVL55_04965 f0c3ffa6d8e80947ddf787e795701aeb 345 Gene3D G3DSA:3.40.50.11190 2 152 1.2E-14 T 11-10-2018 AVL55_04965 f0c3ffa6d8e80947ddf787e795701aeb 345 SUPERFAMILY SSF53756 180 337 2.98E-8 T 11-10-2018 AVL55_04965 f0c3ffa6d8e80947ddf787e795701aeb 345 Gene3D G3DSA:3.40.50.2000 153 291 1.3E-27 T 11-10-2018 AVL55_04965 f0c3ffa6d8e80947ddf787e795701aeb 345 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 4 276 1.0E-54 T 11-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.5E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.5E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.5E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 7.5E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 7.5E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 SUPERFAMILY SSF51735 2 265 2.86E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 Gene3D G3DSA:3.40.50.720 1 273 1.2E-70 T 11-10-2018 AVL55_13595 54b16d3a97d12da04189d412b10ace3b 276 Pfam PF00106 short chain dehydrogenase 3 198 1.3E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09510 3593d9630e6479cc8715e919dc47e939 64 Pfam PF03966 Trm112p-like protein 4 43 2.8E-9 T 11-10-2018 IPR005651 Trm112-like AVL55_09510 3593d9630e6479cc8715e919dc47e939 64 SUPERFAMILY SSF158997 1 55 2.62E-17 T 11-10-2018 AVL55_09510 3593d9630e6479cc8715e919dc47e939 64 Gene3D G3DSA:2.20.25.10 10 64 8.5E-19 T 11-10-2018 AVL55_09510 3593d9630e6479cc8715e919dc47e939 64 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 23.938 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 AVL55_05405 a5b39d4cb4ed6c035da969ae42884b93 79 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 6 78 9.2E-31 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AVL55_05405 a5b39d4cb4ed6c035da969ae42884b93 79 Pfam PF06667 Phage shock protein B 7 77 4.6E-34 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AVL55_18940 e3f4cf92e33ed8685bbb6ef8da57601b 69 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 52 6.9E-17 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 AVL55_18940 e3f4cf92e33ed8685bbb6ef8da57601b 69 SUPERFAMILY SSF46955 5 58 4.94E-10 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_18940 e3f4cf92e33ed8685bbb6ef8da57601b 69 Pfam PF12728 Helix-turn-helix domain 6 54 4.0E-19 T 11-10-2018 AVL55_18940 e3f4cf92e33ed8685bbb6ef8da57601b 69 Gene3D G3DSA:1.10.1660.10 2 54 8.1E-11 T 11-10-2018 AVL55_00540 caea88ed709e193853f1022f395f44fb 243 SUPERFAMILY SSF69618 2 239 8.76E-32 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00540 caea88ed709e193853f1022f395f44fb 243 Gene3D G3DSA:3.40.50.10090 31 164 4.3E-42 T 11-10-2018 AVL55_00540 caea88ed709e193853f1022f395f44fb 243 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 235 3.3E-26 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AVL55_00540 caea88ed709e193853f1022f395f44fb 243 Gene3D G3DSA:3.40.50.10090 2 233 4.3E-42 T 11-10-2018 AVL55_01860 f5ffec4892de722bee1befca560acebd 402 PIRSF PIRSF000521 163 398 2.8E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_01860 f5ffec4892de722bee1befca560acebd 402 PIRSF PIRSF000521 23 152 8.5E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_01860 f5ffec4892de722bee1befca560acebd 402 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_01860 f5ffec4892de722bee1befca560acebd 402 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 3.4E-212 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AVL55_01860 f5ffec4892de722bee1befca560acebd 402 Gene3D G3DSA:3.90.1150.10 21 388 4.2E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_01860 f5ffec4892de722bee1befca560acebd 402 Pfam PF00202 Aminotransferase class-III 16 395 6.6E-125 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AVL55_01860 f5ffec4892de722bee1befca560acebd 402 Gene3D G3DSA:3.40.640.10 55 300 4.2E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_01860 f5ffec4892de722bee1befca560acebd 402 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 395 3.9E-146 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AVL55_01860 f5ffec4892de722bee1befca560acebd 402 SUPERFAMILY SSF53383 12 395 1.1E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_01860 f5ffec4892de722bee1befca560acebd 402 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 69.092 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AVL55_12005 d436aeb7de3258082b48c75d78d71de1 150 SUPERFAMILY SSF52172 6 145 1.85E-33 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_12005 d436aeb7de3258082b48c75d78d71de1 150 Pfam PF00072 Response regulator receiver domain 11 133 2.8E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12005 d436aeb7de3258082b48c75d78d71de1 150 SMART SM00448 9 134 4.8E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_12005 d436aeb7de3258082b48c75d78d71de1 150 Gene3D G3DSA:3.40.50.2300 1 150 2.0E-36 T 11-10-2018 AVL55_07475 7fa283de5bf3d55e74b1e40839bb3ee3 130 Pfam PF11528 Protein of unknown function (DUF3224) 3 126 1.8E-33 T 11-10-2018 IPR021607 Protein of unknown function DUF3224 AVL55_07475 7fa283de5bf3d55e74b1e40839bb3ee3 130 SUPERFAMILY SSF159238 1 127 4.19E-37 T 11-10-2018 IPR023159 SO1590-like superfamily AVL55_07475 7fa283de5bf3d55e74b1e40839bb3ee3 130 Gene3D G3DSA:2.40.350.10 1 130 1.5E-39 T 11-10-2018 IPR023159 SO1590-like superfamily AVL55_14125 c59de062b1dbd7ace82075b73bf55c8f 490 TIGRFAM TIGR02602 8TM_EpsH: exosortase 48 281 2.2E-58 T 11-10-2018 IPR013426 Exosortase, EpsH-like AVL55_14125 c59de062b1dbd7ace82075b73bf55c8f 490 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 190 282 1.8E-17 T 11-10-2018 IPR026392 Exosortase/Archaeosortase domain AVL55_14125 c59de062b1dbd7ace82075b73bf55c8f 490 Pfam PF11984 Protein of unknown function (DUF3485) 371 466 6.6E-7 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI AVL55_14125 c59de062b1dbd7ace82075b73bf55c8f 490 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 34 282 5.9E-54 T 11-10-2018 IPR019127 Exosortase AVL55_04895 712f5db75c8bb4f4b4c53884f7512f3d 680 SUPERFAMILY SSF64518 109 391 1.05E-10 T 11-10-2018 AVL55_04895 712f5db75c8bb4f4b4c53884f7512f3d 680 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 625 677 1.0E-9 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AVL55_04895 712f5db75c8bb4f4b4c53884f7512f3d 680 SUPERFAMILY SSF64518 426 677 3.53E-21 T 11-10-2018 AVL55_08390 76e029372e41e1c31c9721e5b0b2175b 325 Gene3D G3DSA:3.30.70.1290 10 232 4.0E-21 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AVL55_08390 76e029372e41e1c31c9721e5b0b2175b 325 SUPERFAMILY SSF143422 16 192 1.7E-18 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AVL55_15235 4e3d340348c9939c6a33c83720bdca39 372 Gene3D G3DSA:3.40.50.2000 166 352 7.5E-110 T 11-10-2018 AVL55_15235 4e3d340348c9939c6a33c83720bdca39 372 Gene3D G3DSA:3.40.50.2000 6 358 7.5E-110 T 11-10-2018 AVL55_15235 4e3d340348c9939c6a33c83720bdca39 372 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 3.4E-45 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15235 4e3d340348c9939c6a33c83720bdca39 372 SUPERFAMILY SSF53756 3 368 1.41E-111 T 11-10-2018 AVL55_15235 4e3d340348c9939c6a33c83720bdca39 372 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 362 3.2E-99 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15235 4e3d340348c9939c6a33c83720bdca39 372 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 368 35.011 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_15235 4e3d340348c9939c6a33c83720bdca39 372 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 197 346 3.1E-37 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AVL55_17015 f05fb82f24c087261155e88bfa87f259 296 Gene3D G3DSA:3.60.15.10 39 256 8.3E-51 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_17015 f05fb82f24c087261155e88bfa87f259 296 Pfam PF00753 Metallo-beta-lactamase superfamily 56 230 5.4E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_17015 f05fb82f24c087261155e88bfa87f259 296 SUPERFAMILY SSF56281 10 283 1.49E-54 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_17015 f05fb82f24c087261155e88bfa87f259 296 SMART SM00849 56 230 7.8E-29 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 2.3E-36 T 11-10-2018 IPR003004 GspF/PilC family AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 2.3E-36 T 11-10-2018 IPR003004 GspF/PilC family AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 2.3E-36 T 11-10-2018 IPR003004 GspF/PilC family AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 2.3E-36 T 11-10-2018 IPR003004 GspF/PilC family AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 Gene3D G3DSA:1.20.81.30 58 175 4.0E-32 T 11-10-2018 AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 406 2.5E-160 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 Gene3D G3DSA:1.20.81.30 260 369 4.4E-25 T 11-10-2018 AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 1.4E-30 T 11-10-2018 IPR018076 Type II secretion system F domain AVL55_19345 22422efa93cba4e35b7d152cb3d6b7d6 408 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 6.1E-25 T 11-10-2018 IPR018076 Type II secretion system F domain AVL55_13985 e3618f4bceed0255de983733abf2cedc 338 SUPERFAMILY SSF51735 1 336 1.75E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_13985 e3618f4bceed0255de983733abf2cedc 338 Gene3D G3DSA:3.40.50.720 4 319 1.1E-97 T 11-10-2018 AVL55_13985 e3618f4bceed0255de983733abf2cedc 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 265 3.3E-56 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AVL55_13985 e3618f4bceed0255de983733abf2cedc 338 Gene3D G3DSA:3.90.25.10 183 331 1.1E-97 T 11-10-2018 AVL55_13985 e3618f4bceed0255de983733abf2cedc 338 PRINTS PR01713 Nucleotide sugar epimerase signature 259 274 7.7E-29 T 11-10-2018 AVL55_13985 e3618f4bceed0255de983733abf2cedc 338 PRINTS PR01713 Nucleotide sugar epimerase signature 298 315 7.7E-29 T 11-10-2018 AVL55_13985 e3618f4bceed0255de983733abf2cedc 338 PRINTS PR01713 Nucleotide sugar epimerase signature 219 234 7.7E-29 T 11-10-2018 AVL55_13985 e3618f4bceed0255de983733abf2cedc 338 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 7.7E-29 T 11-10-2018 AVL55_14450 f9b0b0d535271bf61981d112fe219f44 209 Gene3D G3DSA:3.40.50.2020 1 209 1.1E-72 T 11-10-2018 AVL55_14450 f9b0b0d535271bf61981d112fe219f44 209 Pfam PF14681 Uracil phosphoribosyltransferase 7 208 3.5E-67 T 11-10-2018 AVL55_14450 f9b0b0d535271bf61981d112fe219f44 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 9.6E-85 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AVL55_14450 f9b0b0d535271bf61981d112fe219f44 209 SUPERFAMILY SSF53271 3 207 2.75E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AVL55_14450 f9b0b0d535271bf61981d112fe219f44 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 209 42.916 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AVL55_05905 1de44c83dff9e3f790fe58af9ca2eda8 92 SUPERFAMILY SSF46785 29 91 4.72E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_05905 1de44c83dff9e3f790fe58af9ca2eda8 92 Gene3D G3DSA:1.10.10.10 17 92 2.3E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_05905 1de44c83dff9e3f790fe58af9ca2eda8 92 Pfam PF01022 Bacterial regulatory protein, arsR family 46 90 1.4E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_05905 1de44c83dff9e3f790fe58af9ca2eda8 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 4.1E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_05905 1de44c83dff9e3f790fe58af9ca2eda8 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 4.1E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_05905 1de44c83dff9e3f790fe58af9ca2eda8 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 71 4.1E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 SUPERFAMILY SSF47240 1 153 2.5E-47 T 11-10-2018 IPR009078 Ferritin-like superfamily AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 PIRSF PIRSF002560 1 157 1.5E-64 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 Pfam PF00210 Ferritin-like domain 9 137 1.2E-33 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 3.1E-68 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.3E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.3E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.3E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.3E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.3E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.3E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.3E-60 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AVL55_10720 832c44caaa1b57116559d5c3d28deaa7 158 Gene3D G3DSA:1.20.1260.10 1 157 5.7E-63 T 11-10-2018 IPR012347 Ferritin-like AVL55_12645 a1235ff9177dd6448957044118365692 573 Gene3D G3DSA:3.40.710.10 49 370 3.5E-95 T 11-10-2018 AVL55_12645 a1235ff9177dd6448957044118365692 573 SUPERFAMILY SSF56601 42 367 1.45E-87 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AVL55_12645 a1235ff9177dd6448957044118365692 573 Pfam PF00144 Beta-lactamase 41 351 4.1E-63 T 11-10-2018 IPR001466 Beta-lactamase-related AVL55_01290 69cfd07fc92a3314177c1568ff84e960 426 Gene3D G3DSA:1.20.1600.10 18 420 2.9E-37 T 11-10-2018 AVL55_01290 69cfd07fc92a3314177c1568ff84e960 426 Pfam PF02321 Outer membrane efflux protein 241 414 2.0E-14 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_01290 69cfd07fc92a3314177c1568ff84e960 426 Pfam PF02321 Outer membrane efflux protein 35 211 2.0E-9 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_01290 69cfd07fc92a3314177c1568ff84e960 426 SUPERFAMILY SSF56954 5 415 1.11E-49 T 11-10-2018 AVL55_03705 746f72f7b0dc0f9ed96633af629fc7f1 398 PIRSF PIRSF001434 2 398 3.7E-110 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AVL55_03705 746f72f7b0dc0f9ed96633af629fc7f1 398 Gene3D G3DSA:3.40.640.10 3 261 4.3E-62 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_03705 746f72f7b0dc0f9ed96633af629fc7f1 398 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 395 5.1E-100 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AVL55_03705 746f72f7b0dc0f9ed96633af629fc7f1 398 Gene3D G3DSA:3.90.1150.10 262 398 4.1E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_03705 746f72f7b0dc0f9ed96633af629fc7f1 398 SUPERFAMILY SSF53383 23 396 1.02E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_19325 5810456ac2eba14d7b1be2ab2c886a3c 134 SMART SM00363 13 80 5.4E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_19325 5810456ac2eba14d7b1be2ab2c886a3c 134 Pfam PF01479 S4 domain 13 59 1.0E-13 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_19325 5810456ac2eba14d7b1be2ab2c886a3c 134 Gene3D G3DSA:3.10.290.10 6 112 1.6E-35 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AVL55_19325 5810456ac2eba14d7b1be2ab2c886a3c 134 PIRSF PIRSF016821 10 134 9.2E-41 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AVL55_19325 5810456ac2eba14d7b1be2ab2c886a3c 134 SUPERFAMILY SSF55174 12 108 4.12E-27 T 11-10-2018 AVL55_16990 1fb83ad72d2ef5cd86157455513ac8c5 967 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 159 5.6E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_16990 1fb83ad72d2ef5cd86157455513ac8c5 967 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 39 967 2.8E-138 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AVL55_16990 1fb83ad72d2ef5cd86157455513ac8c5 967 Gene3D G3DSA:2.170.130.10 22 163 8.4E-12 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_16990 1fb83ad72d2ef5cd86157455513ac8c5 967 SUPERFAMILY SSF56935 27 967 3.66E-72 T 11-10-2018 AVL55_18880 2e82e0f23a2eee6bc9df1f8ab533f827 332 SMART SM00829 19 330 3.3E-8 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AVL55_18880 2e82e0f23a2eee6bc9df1f8ab533f827 332 SUPERFAMILY SSF50129 285 331 6.12E-5 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_18880 2e82e0f23a2eee6bc9df1f8ab533f827 332 SUPERFAMILY SSF50129 1 143 5.89E-35 T 11-10-2018 IPR011032 GroES-like superfamily AVL55_18880 2e82e0f23a2eee6bc9df1f8ab533f827 332 SUPERFAMILY SSF51735 124 298 3.82E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_18880 2e82e0f23a2eee6bc9df1f8ab533f827 332 Gene3D G3DSA:3.90.180.10 22 329 1.3E-118 T 11-10-2018 AVL55_18880 2e82e0f23a2eee6bc9df1f8ab533f827 332 Pfam PF16884 N-terminal domain of oxidoreductase 5 114 1.3E-33 T 11-10-2018 AVL55_18880 2e82e0f23a2eee6bc9df1f8ab533f827 332 Gene3D G3DSA:3.40.50.720 126 301 1.3E-118 T 11-10-2018 AVL55_18880 2e82e0f23a2eee6bc9df1f8ab533f827 332 Pfam PF00107 Zinc-binding dehydrogenase 159 290 1.1E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AVL55_08975 42b35ff62ebfd5a912338743b84b92d1 276 Gene3D G3DSA:2.60.120.10 27 272 7.2E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_08975 42b35ff62ebfd5a912338743b84b92d1 276 SUPERFAMILY SSF51182 60 271 2.41E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_08975 42b35ff62ebfd5a912338743b84b92d1 276 Pfam PF14499 Domain of unknown function (DUF4437) 31 274 5.1E-96 T 11-10-2018 IPR028013 Protein of unknown function DUF4437 AVL55_12275 477af0b984a26b813db0f171833b8ed8 223 Gene3D G3DSA:3.40.109.10 1 222 3.4E-52 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AVL55_12275 477af0b984a26b813db0f171833b8ed8 223 Pfam PF00881 Nitroreductase family 8 197 1.6E-29 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AVL55_12275 477af0b984a26b813db0f171833b8ed8 223 SUPERFAMILY SSF55469 1 220 4.45E-40 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AVL55_13810 28b3225cff33398a44660d99b024de9c 405 SUPERFAMILY SSF53383 4 400 1.21E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_13810 28b3225cff33398a44660d99b024de9c 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AVL55_13810 28b3225cff33398a44660d99b024de9c 405 Gene3D G3DSA:3.90.1150.10 9 397 6.2E-167 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_13810 28b3225cff33398a44660d99b024de9c 405 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 403 2.3E-165 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AVL55_13810 28b3225cff33398a44660d99b024de9c 405 Pfam PF00266 Aminotransferase class-V 25 393 7.0E-143 T 11-10-2018 IPR000192 Aminotransferase class V domain AVL55_13810 28b3225cff33398a44660d99b024de9c 405 Gene3D G3DSA:3.40.640.10 36 295 6.2E-167 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_15680 f4d5368fd7397c08326de6c517a64be0 198 Pfam PF13580 SIS domain 9 144 2.7E-34 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AVL55_15680 f4d5368fd7397c08326de6c517a64be0 198 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 32 187 3.9E-63 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AVL55_15680 f4d5368fd7397c08326de6c517a64be0 198 SUPERFAMILY SSF53697 1 189 1.67E-56 T 11-10-2018 AVL55_15680 f4d5368fd7397c08326de6c517a64be0 198 Gene3D G3DSA:3.40.50.10490 1 195 3.4E-76 T 11-10-2018 AVL55_15680 f4d5368fd7397c08326de6c517a64be0 198 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 36.847 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AVL55_03905 e56227046ff763524cafc42c43c20d27 165 Pfam PF00929 Exonuclease 9 154 8.9E-7 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_03905 e56227046ff763524cafc42c43c20d27 165 SUPERFAMILY SSF53098 9 160 3.54E-16 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_03905 e56227046ff763524cafc42c43c20d27 165 Gene3D G3DSA:3.30.420.10 7 163 2.1E-14 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_19110 5fbbe1e1a8bd92e481a81242a15f08b6 205 Pfam PF00510 Cytochrome c oxidase subunit III 18 203 4.8E-14 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19110 5fbbe1e1a8bd92e481a81242a15f08b6 205 Gene3D G3DSA:1.20.120.80 20 205 5.0E-56 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19110 5fbbe1e1a8bd92e481a81242a15f08b6 205 SUPERFAMILY SSF81452 12 203 4.19E-57 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19110 5fbbe1e1a8bd92e481a81242a15f08b6 205 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 26 205 8.2E-82 T 11-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AVL55_12615 f6b7531d65964f0b0a426db520716536 76 SUPERFAMILY SSF47598 1 45 6.23E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AVL55_18190 b4bf4c502d65bf8f62b06f84dfed7e02 521 Gene3D G3DSA:1.10.287.950 58 360 3.7E-51 T 11-10-2018 AVL55_18190 b4bf4c502d65bf8f62b06f84dfed7e02 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 136 313 4.7E-33 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_18190 b4bf4c502d65bf8f62b06f84dfed7e02 521 SMART SM00283 87 348 2.0E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_18190 b4bf4c502d65bf8f62b06f84dfed7e02 521 SUPERFAMILY SSF58104 93 349 1.23E-52 T 11-10-2018 AVL55_13275 78877c658c21e6baddf793fcb9f9304c 151 Pfam PF12680 SnoaL-like domain 19 118 3.3E-7 T 11-10-2018 IPR037401 SnoaL-like domain AVL55_13275 78877c658c21e6baddf793fcb9f9304c 151 SUPERFAMILY SSF54427 6 127 1.18E-16 T 11-10-2018 IPR032710 NTF2-like domain superfamily AVL55_13275 78877c658c21e6baddf793fcb9f9304c 151 Gene3D G3DSA:3.10.450.50 6 136 5.3E-16 T 11-10-2018 AVL55_11345 a23492e2e39dbc203596b35b7cfc5e60 255 Pfam PF08282 haloacid dehalogenase-like hydrolase 171 216 8.4E-7 T 11-10-2018 AVL55_11345 a23492e2e39dbc203596b35b7cfc5e60 255 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 63 1.1E-6 T 11-10-2018 AVL55_11345 a23492e2e39dbc203596b35b7cfc5e60 255 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 217 1.7E-24 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AVL55_11345 a23492e2e39dbc203596b35b7cfc5e60 255 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 5 253 1.1E-56 T 11-10-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 AVL55_11345 a23492e2e39dbc203596b35b7cfc5e60 255 SUPERFAMILY SSF56784 1 217 6.06E-39 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_11345 a23492e2e39dbc203596b35b7cfc5e60 255 Gene3D G3DSA:3.40.50.1000 5 219 7.8E-68 T 11-10-2018 IPR023214 HAD superfamily AVL55_11345 a23492e2e39dbc203596b35b7cfc5e60 255 Gene3D G3DSA:3.30.980.20 82 174 7.8E-68 T 11-10-2018 AVL55_02035 8a0ea26409407dc3208dc71065ef5cfb 325 SUPERFAMILY SSF53474 19 321 1.3E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_02035 8a0ea26409407dc3208dc71065ef5cfb 325 Gene3D G3DSA:3.40.50.1820 23 324 2.4E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_02035 8a0ea26409407dc3208dc71065ef5cfb 325 Pfam PF12146 Serine aminopeptidase, S33 49 305 3.9E-57 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AVL55_10715 fc40b8464470c3343ba4bab35d149800 523 Pfam PF00999 Sodium/hydrogen exchanger family 6 347 1.6E-40 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AVL55_10715 fc40b8464470c3343ba4bab35d149800 523 Gene3D G3DSA:3.40.50.720 381 520 3.8E-28 T 11-10-2018 AVL55_10715 fc40b8464470c3343ba4bab35d149800 523 SUPERFAMILY SSF51735 387 512 1.3E-17 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_10715 fc40b8464470c3343ba4bab35d149800 523 Gene3D G3DSA:1.20.1530.20 3 364 1.8E-47 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AVL55_10715 fc40b8464470c3343ba4bab35d149800 523 Pfam PF02254 TrkA-N domain 387 502 3.4E-19 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 370 38.419 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 PRINTS PR01010 Flagellar P-ring protein signature 38 53 1.3E-74 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 PRINTS PR01010 Flagellar P-ring protein signature 120 138 1.3E-74 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 PRINTS PR01010 Flagellar P-ring protein signature 161 179 1.3E-74 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 PRINTS PR01010 Flagellar P-ring protein signature 81 100 1.3E-74 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 PRINTS PR01010 Flagellar P-ring protein signature 23 38 1.3E-74 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 PRINTS PR01010 Flagellar P-ring protein signature 187 205 1.3E-74 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 PRINTS PR01010 Flagellar P-ring protein signature 55 70 1.3E-74 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 PRINTS PR01010 Flagellar P-ring protein signature 103 120 1.3E-74 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_04885 d33e01acee8863b5b726fa3a5818aede 370 Pfam PF02119 Flagellar P-ring protein 23 369 1.6E-134 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AVL55_08360 54a00fde3fb3788d05ef50ba476c2d75 271 Pfam PF13622 Thioesterase-like superfamily 28 268 2.1E-46 T 11-10-2018 AVL55_08360 54a00fde3fb3788d05ef50ba476c2d75 271 SUPERFAMILY SSF54637 132 269 4.39E-23 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_08360 54a00fde3fb3788d05ef50ba476c2d75 271 SUPERFAMILY SSF54637 2 116 5.86E-24 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_08360 54a00fde3fb3788d05ef50ba476c2d75 271 Gene3D G3DSA:3.10.129.90 11 270 5.7E-70 T 11-10-2018 AVL55_03155 b8ecaec4710e7bb5f2ae0af6db564b0a 123 Pfam PF01230 HIT domain 12 107 2.1E-26 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AVL55_03155 b8ecaec4710e7bb5f2ae0af6db564b0a 123 SUPERFAMILY SSF54197 2 113 1.7E-36 T 11-10-2018 IPR036265 HIT-like superfamily AVL55_03155 b8ecaec4710e7bb5f2ae0af6db564b0a 123 Gene3D G3DSA:3.30.428.10 1 114 6.2E-37 T 11-10-2018 IPR036265 HIT-like superfamily AVL55_03155 b8ecaec4710e7bb5f2ae0af6db564b0a 123 PRINTS PR00332 Histidine triad family signature 26 44 4.8E-21 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AVL55_03155 b8ecaec4710e7bb5f2ae0af6db564b0a 123 PRINTS PR00332 Histidine triad family signature 5 21 4.8E-21 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AVL55_03155 b8ecaec4710e7bb5f2ae0af6db564b0a 123 PRINTS PR00332 Histidine triad family signature 94 104 4.8E-21 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AVL55_03155 b8ecaec4710e7bb5f2ae0af6db564b0a 123 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 11-10-2018 IPR019808 Histidine triad, conserved site AVL55_02085 f747dce6106eb7b7826db41980be6877 302 Gene3D G3DSA:3.20.20.370 19 250 6.5E-73 T 11-10-2018 AVL55_02085 f747dce6106eb7b7826db41980be6877 302 SUPERFAMILY SSF88713 27 237 2.0E-63 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AVL55_02085 f747dce6106eb7b7826db41980be6877 302 Pfam PF04748 Divergent polysaccharide deacetylase 30 238 4.0E-70 T 11-10-2018 IPR006837 Divergent polysaccharide deacetylase AVL55_12085 31dc5be859ed7e4b0553b76710c2f599 142 SUPERFAMILY SSF51316 12 138 5.93E-58 T 11-10-2018 IPR011057 Mss4-like superfamily AVL55_12085 31dc5be859ed7e4b0553b76710c2f599 142 Gene3D G3DSA:2.170.150.20 1 138 3.1E-60 T 11-10-2018 AVL55_12085 31dc5be859ed7e4b0553b76710c2f599 142 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 12 135 35.861 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AVL55_12085 31dc5be859ed7e4b0553b76710c2f599 142 Pfam PF01641 SelR domain 15 133 1.3E-52 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AVL55_12085 31dc5be859ed7e4b0553b76710c2f599 142 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 13 138 6.1E-53 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AVL55_03965 9b6901a2bcd7f7eed07d6ff527d3b468 361 SUPERFAMILY SSF111369 47 269 2.88E-48 T 11-10-2018 AVL55_03965 9b6901a2bcd7f7eed07d6ff527d3b468 361 Gene3D G3DSA:2.40.50.100 57 185 3.8E-77 T 11-10-2018 AVL55_03965 9b6901a2bcd7f7eed07d6ff527d3b468 361 Gene3D G3DSA:2.40.420.20 274 341 3.8E-77 T 11-10-2018 AVL55_03965 9b6901a2bcd7f7eed07d6ff527d3b468 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 261 1.8E-19 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_03965 9b6901a2bcd7f7eed07d6ff527d3b468 361 Gene3D G3DSA:1.10.287.470 92 151 3.8E-77 T 11-10-2018 AVL55_03965 9b6901a2bcd7f7eed07d6ff527d3b468 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 343 5.3E-61 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_03965 9b6901a2bcd7f7eed07d6ff527d3b468 361 Gene3D G3DSA:2.40.30.170 47 273 3.8E-77 T 11-10-2018 AVL55_17760 479089c81b0c1082bb9a516bce7c6ce3 482 Gene3D G3DSA:1.25.40.10 156 421 8.7E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_00315 05df4c8470d24b0785852dce03c4e2e6 398 SUPERFAMILY SSF53383 5 396 5.72E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_00315 05df4c8470d24b0785852dce03c4e2e6 398 Pfam PF00155 Aminotransferase class I and II 43 387 1.7E-74 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_00315 05df4c8470d24b0785852dce03c4e2e6 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 7 397 8.4E-212 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AVL55_00315 05df4c8470d24b0785852dce03c4e2e6 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.975 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AVL55_00315 05df4c8470d24b0785852dce03c4e2e6 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AVL55_00315 05df4c8470d24b0785852dce03c4e2e6 398 Gene3D G3DSA:3.90.1150.10 40 387 2.5E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_00315 05df4c8470d24b0785852dce03c4e2e6 398 Gene3D G3DSA:3.40.640.10 58 296 2.5E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_06680 61b75276db18c0a717a71e1b5012ef57 224 SUPERFAMILY SSF52833 5 187 2.87E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_06680 61b75276db18c0a717a71e1b5012ef57 224 Gene3D G3DSA:3.40.30.10 9 190 1.6E-49 T 11-10-2018 AVL55_06680 61b75276db18c0a717a71e1b5012ef57 224 Pfam PF13743 Thioredoxin 8 194 3.3E-17 T 11-10-2018 AVL55_06680 61b75276db18c0a717a71e1b5012ef57 224 Gene3D G3DSA:1.10.472.60 45 178 1.6E-49 T 11-10-2018 AVL55_10915 1f2f6974fbd2822ca197acdf57643622 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.2E-46 T 11-10-2018 IPR006214 Bax inhibitor 1-related AVL55_00830 d8f4e6514a35cf2b51fd1f4f2cb54aad 231 Gene3D G3DSA:3.30.450.40 58 228 2.4E-34 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_00830 d8f4e6514a35cf2b51fd1f4f2cb54aad 231 Pfam PF04340 Protein of unknown function, DUF484 20 225 5.1E-44 T 11-10-2018 IPR007435 Protein of unknown function DUF484 AVL55_14405 49f56b0b55bffb25d06e920928bea65e 301 Pfam PF04982 HPP family 50 171 1.5E-36 T 11-10-2018 IPR007065 HPP AVL55_12575 35f423cc94b2533380e72b937d253b2e 264 PIRSF PIRSF001430 1 253 4.0E-75 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_12575 35f423cc94b2533380e72b937d253b2e 264 Gene3D G3DSA:3.30.70.660 106 243 3.3E-46 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AVL55_12575 35f423cc94b2533380e72b937d253b2e 264 SUPERFAMILY SSF55120 2 256 1.34E-86 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_12575 35f423cc94b2533380e72b937d253b2e 264 Pfam PF01416 tRNA pseudouridine synthase 143 245 6.8E-28 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_12575 35f423cc94b2533380e72b937d253b2e 264 Pfam PF01416 tRNA pseudouridine synthase 9 103 5.9E-8 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_12575 35f423cc94b2533380e72b937d253b2e 264 Gene3D G3DSA:3.30.70.580 1 105 6.6E-38 T 11-10-2018 AVL55_12575 35f423cc94b2533380e72b937d253b2e 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 6.2E-70 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_12575 35f423cc94b2533380e72b937d253b2e 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 34.492 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_04835 88684cce2917b8559a9b719ae2236a0e 238 Pfam PF13144 Chaperone for flagella basal body P-ring formation 40 235 7.2E-45 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AVL55_04835 88684cce2917b8559a9b719ae2236a0e 238 Gene3D G3DSA:2.30.30.760 180 238 3.3E-10 T 11-10-2018 AVL55_04835 88684cce2917b8559a9b719ae2236a0e 238 SMART SM00858 116 178 1.0E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AVL55_04835 88684cce2917b8559a9b719ae2236a0e 238 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 104 236 2.0E-35 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AVL55_04835 88684cce2917b8559a9b719ae2236a0e 238 Gene3D G3DSA:3.90.1210.10 114 179 7.3E-6 T 11-10-2018 AVL55_19675 fce8d842afd8af3121ad6637205ab7c5 612 Gene3D G3DSA:3.10.20.310 51 126 1.9E-6 T 11-10-2018 AVL55_19675 fce8d842afd8af3121ad6637205ab7c5 612 Gene3D G3DSA:3.10.20.310 127 214 5.3E-15 T 11-10-2018 AVL55_19675 fce8d842afd8af3121ad6637205ab7c5 612 Pfam PF01103 Surface antigen 303 596 4.8E-35 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AVL55_19675 fce8d842afd8af3121ad6637205ab7c5 612 Pfam PF17243 POTRA domain TamA domain 1 54 123 8.6E-12 T 11-10-2018 IPR035243 TamA, POTRA domain 1 AVL55_19675 fce8d842afd8af3121ad6637205ab7c5 612 Gene3D G3DSA:2.40.160.50 292 612 4.0E-87 T 11-10-2018 AVL55_19675 fce8d842afd8af3121ad6637205ab7c5 612 Gene3D G3DSA:3.10.20.310 215 291 2.6E-16 T 11-10-2018 AVL55_04115 4ac66e21395674f86b31f89173009fd3 516 Gene3D G3DSA:3.30.160.720 332 403 1.6E-14 T 11-10-2018 AVL55_04115 4ac66e21395674f86b31f89173009fd3 516 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 293 436 4.2E-21 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AVL55_04115 4ac66e21395674f86b31f89173009fd3 516 Pfam PF00149 Calcineurin-like phosphoesterase 1 243 1.1E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AVL55_04115 4ac66e21395674f86b31f89173009fd3 516 SUPERFAMILY SSF56300 1 316 3.46E-52 T 11-10-2018 AVL55_04115 4ac66e21395674f86b31f89173009fd3 516 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 270 8.4E-68 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AVL55_04115 4ac66e21395674f86b31f89173009fd3 516 Gene3D G3DSA:3.60.21.10 1 293 6.3E-83 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AVL55_15580 def983268352601fe593e55d4e7dc5eb 576 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 8 574 39.872 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AVL55_15580 def983268352601fe593e55d4e7dc5eb 576 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 16 573 0.0 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AVL55_15580 def983268352601fe593e55d4e7dc5eb 576 PIRSF PIRSF000719 7 576 3.2E-200 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AVL55_15580 def983268352601fe593e55d4e7dc5eb 576 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 16 570 1.3E-222 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AVL55_15175 8a7184b6e7cb132c42e51ab25f157f38 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 250 31.072 T 11-10-2018 IPR009777 Cell division protein ZapD AVL55_15175 8a7184b6e7cb132c42e51ab25f157f38 250 Pfam PF07072 Cell division protein 18 225 1.4E-72 T 11-10-2018 IPR009777 Cell division protein ZapD AVL55_15175 8a7184b6e7cb132c42e51ab25f157f38 250 Gene3D G3DSA:2.60.440.10 5 250 7.0E-82 T 11-10-2018 IPR027462 Z ring-associated protein D, C-terminal AVL55_15175 8a7184b6e7cb132c42e51ab25f157f38 250 SUPERFAMILY SSF160950 2 250 1.44E-81 T 11-10-2018 IPR036268 ZapD domain superfamily AVL55_15175 8a7184b6e7cb132c42e51ab25f157f38 250 Gene3D G3DSA:1.10.3900.10 12 178 7.0E-82 T 11-10-2018 AVL55_19970 47bd77cf2f93fff1f9b408864ef31939 193 Pfam PF03942 DTW domain 3 165 1.6E-39 T 11-10-2018 IPR005636 DTW AVL55_19970 47bd77cf2f93fff1f9b408864ef31939 193 SMART SM01144 1 188 1.7E-48 T 11-10-2018 IPR005636 DTW AVL55_06190 ab3a9037234ea01f3c1aef3fee9ce60f 349 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 312 1.1E-47 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AVL55_06190 ab3a9037234ea01f3c1aef3fee9ce60f 349 Gene3D G3DSA:3.40.50.1100 48 154 5.4E-72 T 11-10-2018 AVL55_06190 ab3a9037234ea01f3c1aef3fee9ce60f 349 Gene3D G3DSA:3.40.50.1100 21 320 5.4E-72 T 11-10-2018 AVL55_06190 ab3a9037234ea01f3c1aef3fee9ce60f 349 SUPERFAMILY SSF53686 16 331 1.09E-69 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AVL55_13490 6d0343c0789a42292e93bef03c188e25 278 SUPERFAMILY SSF52402 3 276 1.79E-79 T 11-10-2018 AVL55_13490 6d0343c0789a42292e93bef03c188e25 278 Pfam PF02540 NAD synthase 22 268 6.2E-65 T 11-10-2018 IPR022310 NAD/GMP synthase AVL55_13490 6d0343c0789a42292e93bef03c188e25 278 TIGRFAM TIGR00552 nadE: NAD+ synthetase 22 274 2.0E-68 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AVL55_13490 6d0343c0789a42292e93bef03c188e25 278 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 274 45.195 T 11-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AVL55_13490 6d0343c0789a42292e93bef03c188e25 278 Gene3D G3DSA:3.40.50.620 1 276 3.1E-82 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_00610 1008ea3b8456b9c0c2ebbd74a50b3dca 490 SUPERFAMILY SSF161098 10 227 9.42E-37 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_00610 1008ea3b8456b9c0c2ebbd74a50b3dca 490 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 222 3.3E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_00610 1008ea3b8456b9c0c2ebbd74a50b3dca 490 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 301 472 6.1E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_00610 1008ea3b8456b9c0c2ebbd74a50b3dca 490 SUPERFAMILY SSF161098 246 473 1.78E-34 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_00610 1008ea3b8456b9c0c2ebbd74a50b3dca 490 Gene3D G3DSA:1.10.3720.10 244 481 2.1E-33 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_00610 1008ea3b8456b9c0c2ebbd74a50b3dca 490 Gene3D G3DSA:1.10.3720.10 1 232 1.2E-43 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_08660 cc549d32bc9d67ca486043d197e309fa 56 SUPERFAMILY SSF57829 2 54 1.4E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AVL55_08660 cc549d32bc9d67ca486043d197e309fa 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 8.7E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08660 cc549d32bc9d67ca486043d197e309fa 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.639 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_08660 cc549d32bc9d67ca486043d197e309fa 56 Pfam PF01783 Ribosomal L32p protein family 2 55 9.7E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 SUPERFAMILY SSF50998 33 369 2.94E-77 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 Gene3D G3DSA:2.130.10.10 19 401 1.4E-96 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 400 38.016 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 2 398 5.2E-120 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 Pfam PF13360 PQQ-like domain 40 94 5.8E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 Pfam PF13360 PQQ-like domain 106 323 1.0E-44 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 SMART SM00564 60 91 0.0058 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 SMART SM00564 333 365 9.1 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 SMART SM00564 255 286 0.069 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 SMART SM00564 293 324 1.4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 SMART SM00564 159 190 0.28 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_13755 9519cddeb2b67f70e3537708676688dc 402 SMART SM00564 118 150 0.013 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AVL55_07940 7b4dbed877aa777d6e5756a3da62891e 167 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 6 165 5.2E-49 T 11-10-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 AVL55_07940 7b4dbed877aa777d6e5756a3da62891e 167 Gene3D G3DSA:1.10.3330.10 15 167 1.5E-51 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AVL55_07940 7b4dbed877aa777d6e5756a3da62891e 167 SUPERFAMILY SSF158694 2 165 2.35E-41 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AVL55_07940 7b4dbed877aa777d6e5756a3da62891e 167 Pfam PF09349 OHCU decarboxylase 7 162 1.8E-34 T 11-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AVL55_18405 4f1dfb7d6efe5fd0010264715c63ad69 338 Gene3D G3DSA:3.60.15.10 17 170 4.2E-25 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_18405 4f1dfb7d6efe5fd0010264715c63ad69 338 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 6 333 1.1E-142 T 11-10-2018 IPR026360 Putative exonuclease, DNA ligase-associated AVL55_18405 4f1dfb7d6efe5fd0010264715c63ad69 338 SUPERFAMILY SSF56281 11 322 1.9E-62 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_18405 4f1dfb7d6efe5fd0010264715c63ad69 338 Pfam PF12706 Beta-lactamase superfamily domain 17 141 1.6E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_12715 c5114ed3692fae02a3001c21c01022c9 66 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 56 5.4E-17 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AVL55_12715 c5114ed3692fae02a3001c21c01022c9 66 SUPERFAMILY SSF52540 7 55 4.53E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_12715 c5114ed3692fae02a3001c21c01022c9 66 Gene3D G3DSA:3.40.50.300 5 65 4.6E-19 T 11-10-2018 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 Gene3D G3DSA:3.40.50.300 159 336 5.9E-53 T 11-10-2018 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 PIRSF PIRSF002401 1 372 1.7E-139 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 9.1E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 9.1E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 9.1E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 9.1E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 SUPERFAMILY SSF82051 2 157 6.28E-54 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 Pfam PF01926 50S ribosome-binding GTPase 161 284 6.9E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 SUPERFAMILY SSF52540 152 339 1.63E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 Pfam PF01018 GTP1/OBG 4 157 2.5E-56 T 11-10-2018 IPR006169 GTP1/OBG domain AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.469 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.8E-146 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AVL55_02560 00c3da09480bbe59a37010190c0c0d80 392 Gene3D G3DSA:2.70.210.12 1 158 5.8E-58 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AVL55_14890 f2c10a4b3c46e801fa3dc45bb190a5f8 504 SUPERFAMILY SSF56601 65 389 7.41E-58 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AVL55_14890 f2c10a4b3c46e801fa3dc45bb190a5f8 504 Gene3D G3DSA:3.40.710.10 61 404 1.8E-58 T 11-10-2018 AVL55_14890 f2c10a4b3c46e801fa3dc45bb190a5f8 504 Pfam PF00144 Beta-lactamase 66 389 2.4E-39 T 11-10-2018 IPR001466 Beta-lactamase-related AVL55_10215 128cbc14a887dd56a209e3ea67032a38 323 Gene3D G3DSA:3.40.50.300 23 188 5.0E-11 T 11-10-2018 AVL55_10215 128cbc14a887dd56a209e3ea67032a38 323 Pfam PF13401 AAA domain 40 169 4.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_10215 128cbc14a887dd56a209e3ea67032a38 323 SUPERFAMILY SSF52540 27 228 2.17E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_10215 128cbc14a887dd56a209e3ea67032a38 323 SMART SM00382 39 186 7.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_13295 68cf9b40962ce9d1444897cecf48c05a 418 PIRSF PIRSF003085 18 417 3.1E-121 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AVL55_13295 68cf9b40962ce9d1444897cecf48c05a 418 Gene3D G3DSA:3.40.50.150 140 412 2.8E-99 T 11-10-2018 AVL55_13295 68cf9b40962ce9d1444897cecf48c05a 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 133 403 7.4E-85 T 11-10-2018 AVL55_13295 68cf9b40962ce9d1444897cecf48c05a 418 SUPERFAMILY SSF53335 21 361 2.51E-90 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_06120 18eaf0d9ee366784d52b3d60e33722e5 182 Pfam PF01464 Transglycosylase SLT domain 29 162 1.8E-9 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AVL55_06120 18eaf0d9ee366784d52b3d60e33722e5 182 Gene3D G3DSA:1.10.530.10 27 180 3.8E-8 T 11-10-2018 AVL55_06120 18eaf0d9ee366784d52b3d60e33722e5 182 SUPERFAMILY SSF53955 29 178 3.75E-17 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AVL55_08710 a520c102117da0dc0f51077a296d4e0b 295 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 15 193 3.3E-54 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_08710 a520c102117da0dc0f51077a296d4e0b 295 Pfam PF13177 DNA polymerase III, delta subunit 11 158 2.0E-45 T 11-10-2018 AVL55_08710 a520c102117da0dc0f51077a296d4e0b 295 SUPERFAMILY SSF52540 5 190 4.41E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_08710 a520c102117da0dc0f51077a296d4e0b 295 Gene3D G3DSA:3.40.50.300 1 162 2.6E-50 T 11-10-2018 AVL55_01200 6489171235ad485ca34c2b1842b825a0 148 SUPERFAMILY SSF54637 17 143 1.15E-16 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_01200 6489171235ad485ca34c2b1842b825a0 148 Gene3D G3DSA:3.10.129.10 15 148 3.9E-15 T 11-10-2018 AVL55_01200 6489171235ad485ca34c2b1842b825a0 148 Pfam PF01575 MaoC like domain 30 118 2.0E-9 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AVL55_05455 e436d6009c569af1f897a636c3761b6a 363 Pfam PF03301 Tryptophan 2,3-dioxygenase 9 340 3.5E-101 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AVL55_05455 e436d6009c569af1f897a636c3761b6a 363 Gene3D G3DSA:1.20.58.480 8 205 3.7E-67 T 11-10-2018 AVL55_05455 e436d6009c569af1f897a636c3761b6a 363 SUPERFAMILY SSF140959 10 340 5.49E-77 T 11-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AVL55_05455 e436d6009c569af1f897a636c3761b6a 363 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 3 340 33.286 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AVL55_06745 308b9897e030723dbb741f1618c460d8 101 Gene3D G3DSA:3.30.750.24 1 101 1.1E-19 T 11-10-2018 IPR036513 STAS domain superfamily AVL55_06745 308b9897e030723dbb741f1618c460d8 101 SUPERFAMILY SSF52091 9 100 6.47E-20 T 11-10-2018 IPR036513 STAS domain superfamily AVL55_06745 308b9897e030723dbb741f1618c460d8 101 Pfam PF13466 STAS domain 21 95 4.1E-11 T 11-10-2018 IPR002645 STAS domain AVL55_16275 3787b1157acbc26c77f0f83d5aa64985 651 Gene3D G3DSA:1.10.287.950 322 651 2.3E-59 T 11-10-2018 AVL55_16275 3787b1157acbc26c77f0f83d5aa64985 651 SUPERFAMILY SSF58104 343 650 3.27E-62 T 11-10-2018 AVL55_16275 3787b1157acbc26c77f0f83d5aa64985 651 SMART SM00283 389 650 2.0E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_16275 3787b1157acbc26c77f0f83d5aa64985 651 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 487 514 6.1E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_16275 3787b1157acbc26c77f0f83d5aa64985 651 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 516 545 6.1E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_16275 3787b1157acbc26c77f0f83d5aa64985 651 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 199 214 6.1E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_16275 3787b1157acbc26c77f0f83d5aa64985 651 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 461 615 1.1E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_05010 f5942501609bf96d6c97bcfaad748b58 384 Pfam PF04991 LicD family 48 83 1.1E-9 T 11-10-2018 IPR007074 LicD family AVL55_03945 f0663b389a5667676cc645181fc524af 535 SUPERFAMILY SSF53649 236 521 1.2E-19 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AVL55_03945 f0663b389a5667676cc645181fc524af 535 Gene3D G3DSA:3.40.720.10 212 535 2.3E-84 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AVL55_03945 f0663b389a5667676cc645181fc524af 535 Pfam PF00884 Sulfatase 234 515 8.9E-44 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AVL55_03945 f0663b389a5667676cc645181fc524af 535 Pfam PF08019 Domain of unknown function (DUF1705) 59 208 2.2E-32 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AVL55_16310 e86dd1433dc8d53b622557d2a6227a02 288 Gene3D G3DSA:1.10.3720.10 46 286 2.7E-50 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_16310 e86dd1433dc8d53b622557d2a6227a02 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 285 1.4E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_16310 e86dd1433dc8d53b622557d2a6227a02 288 SUPERFAMILY SSF161098 51 275 6.15E-46 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_12190 f83d5acc6965e7d93eec41b1a69f3955 327 SUPERFAMILY SSF53448 4 257 2.81E-23 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_12190 f83d5acc6965e7d93eec41b1a69f3955 327 Gene3D G3DSA:3.90.550.10 1 231 2.1E-16 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_12190 f83d5acc6965e7d93eec41b1a69f3955 327 Pfam PF02709 N-terminal domain of galactosyltransferase 164 226 5.1E-10 T 11-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 AVL55_19330 f09a2305093aa2f1b716b7fb6869fd7b 306 Pfam PF13180 PDZ domain 248 301 1.8E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AVL55_19330 f09a2305093aa2f1b716b7fb6869fd7b 306 Pfam PF11356 Type II secretion system protein C 28 168 7.6E-43 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal AVL55_19330 f09a2305093aa2f1b716b7fb6869fd7b 306 Gene3D G3DSA:2.30.42.10 201 302 8.6E-24 T 11-10-2018 AVL55_19330 f09a2305093aa2f1b716b7fb6869fd7b 306 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 25 302 5.5E-58 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AVL55_19330 f09a2305093aa2f1b716b7fb6869fd7b 306 SUPERFAMILY SSF50156 212 302 3.81E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AVL55_19330 f09a2305093aa2f1b716b7fb6869fd7b 306 Gene3D G3DSA:2.30.30.830 102 169 9.4E-27 T 11-10-2018 AVL55_08365 c6bf062db5091cc5208a67b6f345ba78 440 Gene3D G3DSA:1.20.1250.20 15 218 1.2E-42 T 11-10-2018 AVL55_08365 c6bf062db5091cc5208a67b6f345ba78 440 Gene3D G3DSA:1.20.1250.20 221 429 1.9E-19 T 11-10-2018 AVL55_08365 c6bf062db5091cc5208a67b6f345ba78 440 Pfam PF07690 Major Facilitator Superfamily 29 379 8.0E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_08365 c6bf062db5091cc5208a67b6f345ba78 440 SUPERFAMILY SSF103473 11 426 1.96E-67 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_03615 2b6621898174855d0eabd324d0573a41 420 Gene3D G3DSA:3.65.10.10 21 230 1.5E-166 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AVL55_03615 2b6621898174855d0eabd324d0573a41 420 SUPERFAMILY SSF55205 2 419 5.23E-141 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AVL55_03615 2b6621898174855d0eabd324d0573a41 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 1.9E-116 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AVL55_03615 2b6621898174855d0eabd324d0573a41 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 417 7.0E-178 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_03615 2b6621898174855d0eabd324d0573a41 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 44.307 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AVL55_03615 2b6621898174855d0eabd324d0573a41 420 Gene3D G3DSA:3.65.10.10 6 415 1.5E-166 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AVL55_19720 822d7af90374608c9244e70aefeba421 820 SUPERFAMILY SSF55486 372 600 4.71E-40 T 11-10-2018 AVL55_19720 822d7af90374608c9244e70aefeba421 820 Pfam PF01433 Peptidase family M1 domain 373 594 4.2E-13 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AVL55_19720 822d7af90374608c9244e70aefeba421 820 Gene3D G3DSA:1.10.390.60 371 598 9.0E-28 T 11-10-2018 AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 126 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 Gene3D G3DSA:3.40.50.720 1 219 5.1E-56 T 11-10-2018 AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 3.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 3.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 128 3.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 3.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 Pfam PF00106 short chain dehydrogenase 2 181 6.0E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09520 7e5519381e47f0e0afa6abefcdb66958 219 SUPERFAMILY SSF51735 2 219 3.76E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_17800 93700d9afe56f83ed03e5e0809a4f883 103 Gene3D G3DSA:1.10.10.10 28 101 1.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_17800 93700d9afe56f83ed03e5e0809a4f883 103 SMART SM00421 35 92 1.6E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17800 93700d9afe56f83ed03e5e0809a4f883 103 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 38 52 1.2E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17800 93700d9afe56f83ed03e5e0809a4f883 103 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 68 80 1.2E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17800 93700d9afe56f83ed03e5e0809a4f883 103 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 52 68 1.2E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17800 93700d9afe56f83ed03e5e0809a4f883 103 ProSitePatterns PS00622 LuxR-type HTH domain signature. 52 79 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17800 93700d9afe56f83ed03e5e0809a4f883 103 Pfam PF00196 Bacterial regulatory proteins, luxR family 37 90 4.3E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AVL55_17800 93700d9afe56f83ed03e5e0809a4f883 103 SUPERFAMILY SSF46894 32 94 5.44E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_08380 86a5eadb79977528ca77a4d33f5f1cd6 177 SUPERFAMILY SSF55961 24 175 3.67E-20 T 11-10-2018 AVL55_08380 86a5eadb79977528ca77a4d33f5f1cd6 177 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 29 173 1.2E-14 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase AVL55_08380 86a5eadb79977528ca77a4d33f5f1cd6 177 Gene3D G3DSA:3.30.530.20 27 176 1.1E-15 T 11-10-2018 IPR023393 START-like domain superfamily AVL55_08345 b41a6ec01bfcc3438007e582d3667008 130 SUPERFAMILY SSF82649 6 128 2.25E-25 T 11-10-2018 AVL55_08345 b41a6ec01bfcc3438007e582d3667008 130 Pfam PF02657 Fe-S metabolism associated domain 13 128 1.1E-29 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AVL55_08345 b41a6ec01bfcc3438007e582d3667008 130 Gene3D G3DSA:3.90.1010.10 2 130 7.4E-29 T 11-10-2018 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 Gene3D G3DSA:3.40.50.720 39 336 1.6E-77 T 11-10-2018 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 179 273 2.0E-5 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 SUPERFAMILY SSF55347 164 314 9.65E-22 T 11-10-2018 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 Gene3D G3DSA:3.30.360.10 163 358 1.6E-77 T 11-10-2018 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 239 255 1.7E-15 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 86 102 1.7E-15 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 32 45 1.7E-15 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 148 162 1.7E-15 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 281 296 1.7E-15 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 329 345 1.7E-15 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 38 158 7.8E-25 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AVL55_14380 21c98aae7e751af647c966facb20dd26 362 SUPERFAMILY SSF51735 22 186 4.46E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_18280 60c15f0a0195f2a19ea161ee076be85e 125 Gene3D G3DSA:1.20.5.1030 64 121 3.7E-16 T 11-10-2018 IPR038379 SecE superfamily AVL55_18280 60c15f0a0195f2a19ea161ee076be85e 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 121 2.0E-17 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AVL55_18280 60c15f0a0195f2a19ea161ee076be85e 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 64 119 12.879 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_18280 60c15f0a0195f2a19ea161ee076be85e 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 120 6.8E-20 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_18280 60c15f0a0195f2a19ea161ee076be85e 125 PRINTS PR01650 Bacterial translocase SecE signature 107 123 2.3E-32 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AVL55_18280 60c15f0a0195f2a19ea161ee076be85e 125 PRINTS PR01650 Bacterial translocase SecE signature 42 63 2.3E-32 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AVL55_18280 60c15f0a0195f2a19ea161ee076be85e 125 PRINTS PR01650 Bacterial translocase SecE signature 63 83 2.3E-32 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AVL55_18280 60c15f0a0195f2a19ea161ee076be85e 125 PRINTS PR01650 Bacterial translocase SecE signature 87 107 2.3E-32 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AVL55_18280 60c15f0a0195f2a19ea161ee076be85e 125 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 SMART SM00283 278 539 1.9E-68 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 Gene3D G3DSA:1.10.287.950 209 540 9.8E-72 T 11-10-2018 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 Gene3D G3DSA:3.30.450.20 34 185 1.0E-51 T 11-10-2018 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 1.5E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 1.5E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 1.5E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 SUPERFAMILY SSF58104 231 540 1.44E-69 T 11-10-2018 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 SMART SM00304 209 263 9.7E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 Pfam PF17200 Single Cache domain 2 38 184 1.4E-37 T 11-10-2018 IPR033480 Single Cache domain 2 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 Pfam PF00672 HAMP domain 210 254 8.7E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 SMART SM01049 35 126 1.1E-28 T 11-10-2018 IPR033480 Single Cache domain 2 AVL55_02640 644ce3dc0b276d2c00bdd46f7c1513ed 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 356 503 1.4E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_17385 a24266911f4859c688d13723732b6341 540 Gene3D G3DSA:4.10.1080.10 34 169 5.4E-9 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AVL55_17385 a24266911f4859c688d13723732b6341 540 SUPERFAMILY SSF103647 22 121 4.32E-11 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AVL55_17385 a24266911f4859c688d13723732b6341 540 SUPERFAMILY SSF69318 284 524 6.15E-11 T 11-10-2018 AVL55_11720 8596a276d4d60b559ba4ab601c27694d 372 Gene3D G3DSA:2.40.50.100 294 364 2.5E-131 T 11-10-2018 AVL55_11720 8596a276d4d60b559ba4ab601c27694d 372 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 33 366 3.0E-52 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AVL55_11720 8596a276d4d60b559ba4ab601c27694d 372 Gene3D G3DSA:3.40.630.10 14 293 2.5E-131 T 11-10-2018 AVL55_11720 8596a276d4d60b559ba4ab601c27694d 372 SUPERFAMILY SSF53187 13 362 1.06E-37 T 11-10-2018 AVL55_05995 61da7f2603e0e5779d3f4a84f8d27851 792 PRINTS PR00723 Subtilisin serine protease family (S8) signature 529 545 1.8E-9 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_05995 61da7f2603e0e5779d3f4a84f8d27851 792 PRINTS PR00723 Subtilisin serine protease family (S8) signature 252 271 1.8E-9 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_05995 61da7f2603e0e5779d3f4a84f8d27851 792 PRINTS PR00723 Subtilisin serine protease family (S8) signature 289 302 1.8E-9 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AVL55_05995 61da7f2603e0e5779d3f4a84f8d27851 792 Pfam PF00082 Subtilase family 257 571 4.6E-38 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AVL55_05995 61da7f2603e0e5779d3f4a84f8d27851 792 SUPERFAMILY SSF52743 195 651 1.7E-50 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_05995 61da7f2603e0e5779d3f4a84f8d27851 792 Gene3D G3DSA:3.40.50.200 248 604 3.4E-45 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AVL55_05995 61da7f2603e0e5779d3f4a84f8d27851 792 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 257 268 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AVL55_19955 6bf94a4da41416ebba547a2e6619d1e1 213 SUPERFAMILY SSF103088 92 207 7.72E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_19955 6bf94a4da41416ebba547a2e6619d1e1 213 Pfam PF13488 Glycine zipper 29 74 7.0E-14 T 11-10-2018 IPR039567 Glycine zipper domain AVL55_19955 6bf94a4da41416ebba547a2e6619d1e1 213 Pfam PF00691 OmpA family 104 199 3.6E-22 T 11-10-2018 IPR006665 OmpA-like domain AVL55_19955 6bf94a4da41416ebba547a2e6619d1e1 213 Gene3D G3DSA:3.30.1330.60 68 213 2.1E-46 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_19955 6bf94a4da41416ebba547a2e6619d1e1 213 PRINTS PR01021 OMPA domain signature 105 127 4.3E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_19955 6bf94a4da41416ebba547a2e6619d1e1 213 PRINTS PR01021 OMPA domain signature 150 166 4.3E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_19955 6bf94a4da41416ebba547a2e6619d1e1 213 PRINTS PR01021 OMPA domain signature 135 150 4.3E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_17135 1465461736a8f588231b496299524a66 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 12 94 4.1E-10 T 11-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain AVL55_17135 1465461736a8f588231b496299524a66 279 Gene3D G3DSA:2.60.120.330 1 279 1.3E-94 T 11-10-2018 IPR027443 Isopenicillin N synthase-like AVL55_17135 1465461736a8f588231b496299524a66 279 SUPERFAMILY SSF51197 7 276 7.55E-61 T 11-10-2018 AVL55_17135 1465461736a8f588231b496299524a66 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 7.4E-16 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AVL55_07630 9056ee0874c6bcd64e58ad34058b5050 288 PIRSF PIRSF010376 9 285 9.3E-85 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AVL55_07630 9056ee0874c6bcd64e58ad34058b5050 288 Pfam PF00288 GHMP kinases N terminal domain 94 150 1.6E-9 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AVL55_07630 9056ee0874c6bcd64e58ad34058b5050 288 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 283 9.5E-87 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AVL55_07630 9056ee0874c6bcd64e58ad34058b5050 288 Pfam PF08544 GHMP kinases C terminal 213 267 7.7E-6 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AVL55_07630 9056ee0874c6bcd64e58ad34058b5050 288 SUPERFAMILY SSF54211 11 164 1.52E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_07630 9056ee0874c6bcd64e58ad34058b5050 288 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 10 277 31.592 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AVL55_07630 9056ee0874c6bcd64e58ad34058b5050 288 Gene3D G3DSA:3.30.70.890 167 285 2.5E-31 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AVL55_07630 9056ee0874c6bcd64e58ad34058b5050 288 Gene3D G3DSA:3.30.230.10 2 165 1.4E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_07630 9056ee0874c6bcd64e58ad34058b5050 288 SUPERFAMILY SSF55060 168 282 9.11E-35 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AVL55_06450 4906d2678b5e31b71b8953dd1bdbc745 425 PIRSF PIRSF006603 1 425 1.0E-102 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_06450 4906d2678b5e31b71b8953dd1bdbc745 425 Pfam PF01554 MatE 218 376 2.1E-20 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_06450 4906d2678b5e31b71b8953dd1bdbc745 425 Pfam PF01554 MatE 2 153 2.6E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_06450 4906d2678b5e31b71b8953dd1bdbc745 425 TIGRFAM TIGR00797 matE: MATE efflux family protein 2 384 6.5E-54 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AVL55_13510 cf1e7b4a82ecec58def1d3af40dc6d2c 212 PIRSF PIRSF004525 2 211 3.6E-27 T 11-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 689 25.939 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 4.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 4.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 4.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 4.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 4.8E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 Pfam PF05746 DALR anticodon binding domain 581 683 1.3E-10 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 Gene3D G3DSA:1.10.730.10 573 684 2.4E-5 T 11-10-2018 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 SUPERFAMILY SSF109604 339 490 2.67E-12 T 11-10-2018 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 549 2.0E-206 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 SUPERFAMILY SSF47323 583 680 1.57E-5 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_00030 0d7c34fce41101738b59f5a207077d76 692 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 689 5.2E-265 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 SUPERFAMILY SSF53659 394 709 3.17E-90 T 11-10-2018 AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 PIRSF PIRSF006107 1 713 0.0 T 11-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 Pfam PF07085 DRTGG domain 233 344 3.0E-28 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 Pfam PF13500 AAA domain 3 229 1.3E-32 T 11-10-2018 AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 394 706 1.0E-120 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.5E-126 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 Gene3D G3DSA:3.40.1390.20 225 363 3.9E-19 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 Gene3D G3DSA:3.40.50.10950 397 709 1.7E-131 T 11-10-2018 AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 Gene3D G3DSA:3.40.50.10750 529 682 1.7E-131 T 11-10-2018 AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 SUPERFAMILY SSF75138 229 353 8.63E-24 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 SUPERFAMILY SSF52540 1 240 1.22E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07490 f2d2c4ef9576592fe0698f9ac03fd364 713 Gene3D G3DSA:3.40.50.300 3 224 1.6E-14 T 11-10-2018 AVL55_16825 67a92762edb07b9c14772c1132942ed3 280 Pfam PF00756 Putative esterase 22 271 7.7E-62 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AVL55_16825 67a92762edb07b9c14772c1132942ed3 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 275 2.1E-121 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AVL55_16825 67a92762edb07b9c14772c1132942ed3 280 Gene3D G3DSA:3.40.50.1820 1 280 7.1E-95 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_16825 67a92762edb07b9c14772c1132942ed3 280 SUPERFAMILY SSF53474 1 277 1.86E-89 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_04060 c4f59f9c60b5f56997ac0edadd47fec3 142 Pfam PF02566 OsmC-like protein 44 139 2.4E-20 T 11-10-2018 IPR003718 OsmC/Ohr family AVL55_04060 c4f59f9c60b5f56997ac0edadd47fec3 142 Gene3D G3DSA:2.20.25.10 1 48 5.7E-22 T 11-10-2018 AVL55_04060 c4f59f9c60b5f56997ac0edadd47fec3 142 SUPERFAMILY SSF82784 8 141 3.01E-43 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AVL55_04060 c4f59f9c60b5f56997ac0edadd47fec3 142 Gene3D G3DSA:3.30.300.20 49 141 1.8E-32 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AVL55_04060 c4f59f9c60b5f56997ac0edadd47fec3 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 140 1.1E-55 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AVL55_09810 69ce6b758bbf9980b7b89b602f48ff3e 357 Gene3D G3DSA:3.30.565.10 215 353 1.4E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_09810 69ce6b758bbf9980b7b89b602f48ff3e 357 SMART SM00387 254 354 0.0014 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_09810 69ce6b758bbf9980b7b89b602f48ff3e 357 SUPERFAMILY SSF55874 215 351 8.91E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_09810 69ce6b758bbf9980b7b89b602f48ff3e 357 Pfam PF06580 Histidine kinase 160 239 2.3E-25 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AVL55_14575 d09b32abcbeb92acf32591981125adb5 353 SUPERFAMILY SSF101898 41 329 7.06E-18 T 11-10-2018 AVL55_14575 d09b32abcbeb92acf32591981125adb5 353 Pfam PF03022 Major royal jelly protein 107 294 3.9E-24 T 11-10-2018 IPR017996 Major royal jelly protein/protein yellow AVL55_14575 d09b32abcbeb92acf32591981125adb5 353 Gene3D G3DSA:2.120.10.30 26 352 4.6E-76 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_13225 5b4456fc92ea30adaa58b1eb5ccaf146 301 Gene3D G3DSA:3.40.190.10 163 264 1.2E-60 T 11-10-2018 AVL55_13225 5b4456fc92ea30adaa58b1eb5ccaf146 301 SUPERFAMILY SSF53850 88 296 6.7E-44 T 11-10-2018 AVL55_13225 5b4456fc92ea30adaa58b1eb5ccaf146 301 Gene3D G3DSA:1.10.10.10 3 92 1.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_13225 5b4456fc92ea30adaa58b1eb5ccaf146 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_13225 5b4456fc92ea30adaa58b1eb5ccaf146 301 SUPERFAMILY SSF46785 5 88 3.77E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_13225 5b4456fc92ea30adaa58b1eb5ccaf146 301 Gene3D G3DSA:3.40.190.10 93 291 1.2E-60 T 11-10-2018 AVL55_13225 5b4456fc92ea30adaa58b1eb5ccaf146 301 Pfam PF03466 LysR substrate binding domain 88 293 3.6E-42 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_05450 76c6d8b0402e6ce2e19e285fa3a53d3d 93 Pfam PF10719 Late competence development protein ComFB 8 82 2.2E-21 T 11-10-2018 IPR019657 Late competence development protein ComFB AVL55_08190 b8b2d06e2605efae1cd7af4c1aa980e9 423 Gene3D G3DSA:3.65.10.10 5 420 4.9E-113 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AVL55_08190 b8b2d06e2605efae1cd7af4c1aa980e9 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 412 1.7E-48 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AVL55_08190 b8b2d06e2605efae1cd7af4c1aa980e9 423 Gene3D G3DSA:3.65.10.10 19 230 4.9E-113 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AVL55_08190 b8b2d06e2605efae1cd7af4c1aa980e9 423 SUPERFAMILY SSF55205 3 421 5.72E-86 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AVL55_12155 299597558b61d0a9589a227ba62199d8 81 Gene3D G3DSA:3.40.50.1580 1 38 8.8E-10 T 11-10-2018 AVL55_12155 299597558b61d0a9589a227ba62199d8 81 Gene3D G3DSA:3.40.50.1580 39 79 2.7E-7 T 11-10-2018 AVL55_12155 299597558b61d0a9589a227ba62199d8 81 SUPERFAMILY SSF53167 1 37 7.05E-6 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AVL55_05480 c122591996f5b04d96cb48d95a3e4fe0 174 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 161 5.1E-22 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AVL55_12815 56041ba74bbf9f5932f4cb72ee91152f 479 Pfam PF06974 Protein of unknown function (DUF1298) 305 450 5.4E-24 T 11-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AVL55_12815 56041ba74bbf9f5932f4cb72ee91152f 479 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 5 264 3.9E-31 T 11-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AVL55_10185 155c2b35b85e6254387319cda30863e1 284 Gene3D G3DSA:1.10.10.10 5 100 2.2E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_10185 155c2b35b85e6254387319cda30863e1 284 SUPERFAMILY SSF46785 179 243 1.4E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_08745 3e056b9c2f55d9036fad30b6f3331054 121 Pfam PF09685 Domain of unknown function (DUF4870) 14 119 1.3E-28 T 11-10-2018 IPR019109 Protein of unknown function DUF4870 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 Gene3D G3DSA:3.30.300.10 406 525 2.9E-50 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 SUPERFAMILY SSF52317 8 237 1.97E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 2.1E-39 T 11-10-2018 IPR017926 Glutamine amidotransferase AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 3.1E-82 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 5.2E-155 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 Gene3D G3DSA:3.40.50.880 9 206 6.8E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 Pfam PF00958 GMP synthase C terminal domain 433 524 4.2E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.6E-7 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.6E-7 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.6E-7 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 2.9E-5 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 2.9E-5 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 2.9E-5 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 SUPERFAMILY SSF54810 405 525 2.22E-50 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 SUPERFAMILY SSF52402 197 420 1.65E-59 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.2E-6 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.2E-6 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.2E-6 T 11-10-2018 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.58 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 Pfam PF02540 NAD synthase 216 261 7.6E-7 T 11-10-2018 IPR022310 NAD/GMP synthase AVL55_13725 e31d7895adf0ce0e0f92e383f951f00a 525 Gene3D G3DSA:3.40.50.620 209 405 8.8E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_04990 0dcf9bc3dcf7cf0cd095e2cf6391553f 356 Pfam PF04443 Acyl-protein synthetase, LuxE 9 354 3.4E-54 T 11-10-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 AVL55_04990 0dcf9bc3dcf7cf0cd095e2cf6391553f 356 Gene3D G3DSA:3.40.50.12780 11 343 4.2E-18 T 11-10-2018 AVL55_04990 0dcf9bc3dcf7cf0cd095e2cf6391553f 356 SUPERFAMILY SSF56801 65 342 3.14E-7 T 11-10-2018 AVL55_18455 69b9da7e040e5a58aa52b9d556217dc0 250 Pfam PF08241 Methyltransferase domain 73 167 3.5E-19 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AVL55_18455 69b9da7e040e5a58aa52b9d556217dc0 250 Gene3D G3DSA:3.40.50.150 17 248 8.0E-62 T 11-10-2018 AVL55_18455 69b9da7e040e5a58aa52b9d556217dc0 250 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 17 249 33.784 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AVL55_18455 69b9da7e040e5a58aa52b9d556217dc0 250 SUPERFAMILY SSF53335 15 232 6.05E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_18455 69b9da7e040e5a58aa52b9d556217dc0 250 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 17 243 5.0E-76 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AVL55_15850 6a299799d532e279dec60d5f18c80601 442 Pfam PF13006 Insertion element 4 transposase N-terminal 19 109 7.9E-26 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AVL55_15850 6a299799d532e279dec60d5f18c80601 442 Pfam PF01609 Transposase DDE domain 128 352 1.1E-20 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AVL55_15850 6a299799d532e279dec60d5f18c80601 442 SUPERFAMILY SSF53098 125 357 1.9E-24 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_05370 1045cc7e9b382bc6e13ff21a7d9611b5 268 SUPERFAMILY SSF52540 4 252 2.09E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05370 1045cc7e9b382bc6e13ff21a7d9611b5 268 Gene3D G3DSA:3.40.50.300 2 268 9.9E-65 T 11-10-2018 AVL55_05370 1045cc7e9b382bc6e13ff21a7d9611b5 268 SMART SM00382 37 231 4.9E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_05370 1045cc7e9b382bc6e13ff21a7d9611b5 268 Pfam PF00005 ABC transporter 30 182 3.4E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_15165 73e913193cab2a0bfc0f7b1699162093 297 Pfam PF01478 Type IV leader peptidase family 146 254 1.3E-24 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AVL55_15165 73e913193cab2a0bfc0f7b1699162093 297 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 211 221 9.4E-27 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AVL55_15165 73e913193cab2a0bfc0f7b1699162093 297 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 233 9.4E-27 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AVL55_15165 73e913193cab2a0bfc0f7b1699162093 297 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 234 249 9.4E-27 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AVL55_15165 73e913193cab2a0bfc0f7b1699162093 297 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 154 171 9.4E-27 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AVL55_15165 73e913193cab2a0bfc0f7b1699162093 297 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 22 135 7.3E-33 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal AVL55_18075 bc598619aaa1af51dfbf5b99ec7c42af 199 Pfam PF16357 Putative PepSY_TM-like 7 199 3.0E-71 T 11-10-2018 IPR032307 Putative PepSY TM-like protein AVL55_08020 09054e58fb41383872229c1d36cbdc3d 109 Gene3D G3DSA:3.20.20.140 16 107 1.1E-6 T 11-10-2018 AVL55_19545 6e3e013210fea2484b323bd940dd773d 222 Pfam PF01177 Asp/Glu/Hydantoin racemase 1 215 2.2E-59 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AVL55_19545 6e3e013210fea2484b323bd940dd773d 222 SUPERFAMILY SSF53681 1 105 9.15E-28 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AVL55_19545 6e3e013210fea2484b323bd940dd773d 222 Gene3D G3DSA:3.40.50.1860 2 215 6.6E-78 T 11-10-2018 AVL55_19545 6e3e013210fea2484b323bd940dd773d 222 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 79 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AVL55_19545 6e3e013210fea2484b323bd940dd773d 222 SUPERFAMILY SSF53681 109 220 9.97E-34 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AVL55_19545 6e3e013210fea2484b323bd940dd773d 222 Gene3D G3DSA:3.40.50.1860 95 206 6.6E-78 T 11-10-2018 AVL55_19545 6e3e013210fea2484b323bd940dd773d 222 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 221 9.9E-66 T 11-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AVL55_02460 1ed120c47860379991a75a6bd58521a0 216 Gene3D G3DSA:1.10.260.40 15 95 1.6E-11 T 11-10-2018 AVL55_02460 1ed120c47860379991a75a6bd58521a0 216 SUPERFAMILY SSF47413 23 84 4.83E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_02460 1ed120c47860379991a75a6bd58521a0 216 Pfam PF01381 Helix-turn-helix 30 81 1.3E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_02460 1ed120c47860379991a75a6bd58521a0 216 SMART SM00530 29 83 9.2E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_07855 2329d8d47c059e32f41fc68dfa7027b2 168 SUPERFAMILY SSF52075 5 99 4.45E-21 T 11-10-2018 AVL55_07855 2329d8d47c059e32f41fc68dfa7027b2 168 Gene3D G3DSA:3.80.10.10 3 120 2.8E-21 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AVL55_07855 2329d8d47c059e32f41fc68dfa7027b2 168 SMART SM00369 15 37 5.8 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AVL55_07855 2329d8d47c059e32f41fc68dfa7027b2 168 SMART SM00369 38 61 2.4 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AVL55_07855 2329d8d47c059e32f41fc68dfa7027b2 168 Pfam PF13855 Leucine rich repeat 7 51 1.0E-8 T 11-10-2018 IPR001611 Leucine-rich repeat GO:0005515 AVL55_10105 4327c4c469a0871e9085d5c4fe87b992 455 Pfam PF07044 Protein of unknown function (DUF1329) 85 450 2.0E-158 T 11-10-2018 IPR010752 Protein of unknown function DUF1329 AVL55_02340 c6429c1568b3e5e3b54229e027881fae 297 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 5 293 6.7E-122 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AVL55_02340 c6429c1568b3e5e3b54229e027881fae 297 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 1 293 40.633 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AVL55_02340 c6429c1568b3e5e3b54229e027881fae 297 Gene3D G3DSA:1.10.8.1080 217 295 9.7E-29 T 11-10-2018 AVL55_02340 c6429c1568b3e5e3b54229e027881fae 297 Gene3D G3DSA:3.40.50.10490 1 216 8.4E-76 T 11-10-2018 AVL55_02340 c6429c1568b3e5e3b54229e027881fae 297 SUPERFAMILY SSF53697 3 247 3.78E-71 T 11-10-2018 AVL55_02340 c6429c1568b3e5e3b54229e027881fae 297 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 183 200 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AVL55_02340 c6429c1568b3e5e3b54229e027881fae 297 Pfam PF13580 SIS domain 34 162 9.7E-8 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AVL55_01615 fb7d967f2be3b491279516aa6c238f90 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 4.5E-39 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AVL55_01615 fb7d967f2be3b491279516aa6c238f90 110 Gene3D G3DSA:3.90.470.10 1 110 8.1E-46 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_01615 fb7d967f2be3b491279516aa6c238f90 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.9 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01615 fb7d967f2be3b491279516aa6c238f90 110 SUPERFAMILY SSF54843 1 109 1.57E-43 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AVL55_01615 fb7d967f2be3b491279516aa6c238f90 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_01615 fb7d967f2be3b491279516aa6c238f90 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-48 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 Pfam PF00691 OmpA family 186 281 6.6E-21 T 11-10-2018 IPR006665 OmpA-like domain AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 Gene3D G3DSA:2.60.40.2540 21 174 5.9E-48 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01021 OMPA domain signature 232 248 4.8E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01021 OMPA domain signature 217 232 4.8E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 SUPERFAMILY SSF103088 159 286 1.44E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 Gene3D G3DSA:3.30.1330.60 175 290 4.3E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 65 83 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 270 290 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 122 144 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 147 166 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 84 102 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 27 43 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 203 229 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 232 249 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 173 200 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 250 269 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 103 120 6.7E-54 T 11-10-2018 AVL55_06375 b38b79ed35a3ea92c0d3932f6e773c1d 290 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 44 62 6.7E-54 T 11-10-2018 AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 SUPERFAMILY SSF51735 11 242 3.33E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 5.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 5.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 5.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 5.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 5.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 5.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 Pfam PF00106 short chain dehydrogenase 14 210 1.4E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_09690 447b056c51baccc09b0ba1c91474368d 247 Gene3D G3DSA:3.40.50.720 2 246 1.1E-67 T 11-10-2018 AVL55_18835 32b1e16625e43f4575bb4e628883b300 187 Pfam PF00571 CBS domain 126 166 5.8E-6 T 11-10-2018 IPR000644 CBS domain AVL55_18835 32b1e16625e43f4575bb4e628883b300 187 Pfam PF00571 CBS domain 42 84 4.3E-5 T 11-10-2018 IPR000644 CBS domain AVL55_18835 32b1e16625e43f4575bb4e628883b300 187 SUPERFAMILY SSF54631 42 166 1.48E-16 T 11-10-2018 AVL55_18835 32b1e16625e43f4575bb4e628883b300 187 Gene3D G3DSA:3.10.580.10 19 173 3.2E-18 T 11-10-2018 AVL55_18835 32b1e16625e43f4575bb4e628883b300 187 SMART SM00116 41 89 0.73 T 11-10-2018 IPR000644 CBS domain AVL55_18835 32b1e16625e43f4575bb4e628883b300 187 SMART SM00116 122 167 3.3 T 11-10-2018 IPR000644 CBS domain AVL55_05005 5543d50e7c6f07cfcb7afe09a7fa2ac4 631 Pfam PF00884 Sulfatase 272 538 6.6E-28 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AVL55_05005 5543d50e7c6f07cfcb7afe09a7fa2ac4 631 Gene3D G3DSA:3.40.720.10 266 554 5.0E-42 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AVL55_05005 5543d50e7c6f07cfcb7afe09a7fa2ac4 631 SUPERFAMILY SSF53649 272 584 3.66E-39 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AVL55_03470 8eac3b8c34a3cfaa91a430984ec1b830 121 Gene3D G3DSA:2.60.40.420 19 112 7.7E-19 T 11-10-2018 IPR008972 Cupredoxin AVL55_03470 8eac3b8c34a3cfaa91a430984ec1b830 121 SUPERFAMILY SSF49503 18 112 1.56E-14 T 11-10-2018 IPR008972 Cupredoxin AVL55_03470 8eac3b8c34a3cfaa91a430984ec1b830 121 Pfam PF13473 Cupredoxin-like domain 14 111 4.9E-22 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain AVL55_03585 d25954f0e53c453665f58fe4b657c92a 266 SUPERFAMILY SSF52540 4 234 2.42E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_03585 d25954f0e53c453665f58fe4b657c92a 266 Gene3D G3DSA:3.40.50.300 1 248 4.8E-63 T 11-10-2018 AVL55_03585 d25954f0e53c453665f58fe4b657c92a 266 SMART SM00382 29 224 5.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_03585 d25954f0e53c453665f58fe4b657c92a 266 Pfam PF00005 ABC transporter 21 169 1.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_03585 d25954f0e53c453665f58fe4b657c92a 266 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_05950 f2ac37d89f06fcac768d916249657227 230 SUPERFAMILY SSF52833 61 219 3.21E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_05950 f2ac37d89f06fcac768d916249657227 230 Pfam PF13098 Thioredoxin-like domain 106 214 9.0E-15 T 11-10-2018 IPR012336 Thioredoxin-like fold AVL55_05950 f2ac37d89f06fcac768d916249657227 230 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 72 2.8E-8 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AVL55_05950 f2ac37d89f06fcac768d916249657227 230 SUPERFAMILY SSF54423 30 74 2.94E-8 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AVL55_05950 f2ac37d89f06fcac768d916249657227 230 Gene3D G3DSA:3.10.450.70 29 76 1.8E-7 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AVL55_05950 f2ac37d89f06fcac768d916249657227 230 Gene3D G3DSA:3.40.30.10 101 229 3.2E-33 T 11-10-2018 AVL55_00565 4ac6fe69323b43faa08705f848afbce5 90 SMART SM01409 8 61 4.3E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AVL55_00565 4ac6fe69323b43faa08705f848afbce5 90 SUPERFAMILY SSF63562 1 78 2.27E-25 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AVL55_00565 4ac6fe69323b43faa08705f848afbce5 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.7E-26 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_00565 4ac6fe69323b43faa08705f848afbce5 90 Gene3D G3DSA:3.90.940.10 1 90 3.1E-28 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AVL55_00565 4ac6fe69323b43faa08705f848afbce5 90 Pfam PF01192 RNA polymerase Rpb6 10 60 2.6E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AVL55_00565 4ac6fe69323b43faa08705f848afbce5 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.4 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 Pfam PF01336 OB-fold nucleic acid binding domain 20 98 2.2E-10 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 Gene3D G3DSA:3.30.930.10 103 464 1.3E-110 T 11-10-2018 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 459 5.9E-84 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 Gene3D G3DSA:2.40.50.140 1 102 1.7E-20 T 11-10-2018 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 SUPERFAMILY SSF50249 15 101 1.89E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 465 2.2E-199 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 465 45.637 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 SUPERFAMILY SSF55681 96 463 3.11E-98 T 11-10-2018 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 219 6.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 223 236 6.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 380 396 6.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_07000 2884f86fe27bcc43c33567a911a1c98c 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 420 434 6.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AVL55_02165 a8b7df5cc9a66e95ce00bd201a65ea45 79 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 78 24.468 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AVL55_02165 a8b7df5cc9a66e95ce00bd201a65ea45 79 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 3.8E-20 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AVL55_02165 a8b7df5cc9a66e95ce00bd201a65ea45 79 Pfam PF02416 mttA/Hcf106 family 4 56 7.9E-14 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AVL55_15800 e8a92d7965336757608b03f3f0eb2693 195 PIRSF PIRSF028063 1 165 5.5E-14 T 11-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger AVL55_15800 e8a92d7965336757608b03f3f0eb2693 195 Pfam PF10881 Protein of unknown function (DUF2726) 35 159 8.3E-37 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 AVL55_17600 bc69d6b4dc83c48904eb0ed511efe561 82 SUPERFAMILY SSF47598 4 45 3.34E-10 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AVL55_17600 bc69d6b4dc83c48904eb0ed511efe561 82 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 1.2E-10 T 11-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 SUPERFAMILY SSF69075 315 416 9.02E-22 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 SUPERFAMILY SSF51735 160 313 2.51E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 Gene3D G3DSA:3.40.50.720 159 311 2.2E-43 T 11-10-2018 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 401 4.4E-17 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.1E-48 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 169 304 4.6E-45 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 29.651 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 PIRSF PIRSF000445 1 424 1.7E-149 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 SUPERFAMILY SSF69742 1 156 8.5E-47 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 402 1.0E-134 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AVL55_07640 66411cc3d398261b2d8ed31f5dee7515 424 Gene3D G3DSA:3.30.460.30 1 156 1.0E-55 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 281 7.7E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 PIRSF PIRSF000770 8 284 1.9E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 283 3.5E-126 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 SUPERFAMILY SSF88946 14 124 6.28E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 Pfam PF04545 Sigma-70, region 4 229 279 2.0E-14 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 Pfam PF04542 Sigma-70 region 2 55 124 1.4E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 Pfam PF00140 Sigma-70 factor, region 1.2 21 47 2.5E-5 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 79 92 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 Gene3D G3DSA:1.10.601.10 7 124 5.3E-30 T 11-10-2018 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 SUPERFAMILY SSF88659 199 282 8.78E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 8.0E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 PRINTS PR00046 Major sigma-70 factor signature 79 92 8.0E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 PRINTS PR00046 Major sigma-70 factor signature 233 245 8.0E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 8.0E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 Gene3D G3DSA:1.20.140.160 131 283 4.9E-15 T 11-10-2018 AVL55_17910 b357526d7efc056e9d6fe673b0526e64 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 52.234 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AVL55_05090 4eef376490c6599b35cad9af43059af5 151 Pfam PF01467 Cytidylyltransferase-like 6 108 5.5E-22 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AVL55_05090 4eef376490c6599b35cad9af43059af5 151 Gene3D G3DSA:3.40.50.620 1 128 1.2E-35 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_05090 4eef376490c6599b35cad9af43059af5 151 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 66 3.5E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AVL55_05090 4eef376490c6599b35cad9af43059af5 151 SUPERFAMILY SSF52374 1 125 6.19E-30 T 11-10-2018 AVL55_09380 d9ca625cff0ac349c27bef936f1c75ea 184 Gene3D G3DSA:3.30.40.60 63 157 1.3E-24 T 11-10-2018 AVL55_09380 d9ca625cff0ac349c27bef936f1c75ea 184 SMART SM00507 75 128 2.2E-13 T 11-10-2018 IPR003615 HNH nuclease AVL55_09380 d9ca625cff0ac349c27bef936f1c75ea 184 Pfam PF14279 HNH endonuclease 88 142 1.0E-20 T 11-10-2018 IPR029471 HNH endonuclease 5 AVL55_16085 2da46d30f23ff6ac15431eaa067593a6 147 Pfam PF06271 RDD family 8 131 6.3E-12 T 11-10-2018 IPR010432 RDD AVL55_05585 e30c3379a792cb47f04011706afbd661 283 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 15 111 1.9E-30 T 11-10-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain AVL55_05585 e30c3379a792cb47f04011706afbd661 283 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 115 270 6.0E-51 T 11-10-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system AVL55_08060 f704b535658116e0a7a7743c03bfabcc 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 76 8.4E-12 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AVL55_08060 f704b535658116e0a7a7743c03bfabcc 277 Pfam PF01380 SIS domain 121 243 3.1E-8 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AVL55_08060 f704b535658116e0a7a7743c03bfabcc 277 SUPERFAMILY SSF53697 101 250 3.56E-12 T 11-10-2018 AVL55_08060 f704b535658116e0a7a7743c03bfabcc 277 SUPERFAMILY SSF46689 8 84 8.06E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_08060 f704b535658116e0a7a7743c03bfabcc 277 Gene3D G3DSA:1.10.10.10 3 83 2.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_08060 f704b535658116e0a7a7743c03bfabcc 277 Gene3D G3DSA:3.40.50.10490 95 269 1.9E-23 T 11-10-2018 AVL55_02105 4d451c0cf03eb9f0c7460e886c117b23 315 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 283 4.8E-79 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AVL55_02105 4d451c0cf03eb9f0c7460e886c117b23 315 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 285 44.396 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AVL55_02105 4d451c0cf03eb9f0c7460e886c117b23 315 Pfam PF02666 Phosphatidylserine decarboxylase 63 280 4.2E-60 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AVL55_11715 630f54e54504bddbcb2499bf1a736dd0 256 SUPERFAMILY SSF69572 5 254 1.09E-75 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AVL55_11715 630f54e54504bddbcb2499bf1a736dd0 256 Pfam PF00899 ThiF family 13 253 1.3E-57 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AVL55_11715 630f54e54504bddbcb2499bf1a736dd0 256 Gene3D G3DSA:3.40.50.720 5 256 8.0E-80 T 11-10-2018 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 Pfam PF00700 Bacterial flagellin C-terminal helical region 198 282 2.2E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.6E-38 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 PRINTS PR00207 Flagellin signature 111 134 7.5E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 PRINTS PR00207 Flagellin signature 76 95 7.5E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 PRINTS PR00207 Flagellin signature 37 54 7.5E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 Gene3D G3DSA:1.20.1330.10 45 176 8.2E-75 T 11-10-2018 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 Gene3D G3DSA:1.20.1330.10 191 242 1.5E-41 T 11-10-2018 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 Gene3D G3DSA:1.20.58.1830 5 33 8.2E-75 T 11-10-2018 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 Gene3D G3DSA:1.20.58.1830 248 282 1.5E-41 T 11-10-2018 AVL55_04910 5e5b31a0bca7d6bb68130de94f671190 283 SUPERFAMILY SSF64518 1 282 1.07E-90 T 11-10-2018 AVL55_12830 85aac6977141d74f20f8d4d08de427d6 486 Pfam PF11815 Domain of unknown function (DUF3336) 7 141 4.3E-34 T 11-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 AVL55_12830 85aac6977141d74f20f8d4d08de427d6 486 SUPERFAMILY SSF52151 144 470 1.7E-50 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AVL55_12830 85aac6977141d74f20f8d4d08de427d6 486 Gene3D G3DSA:3.40.1090.10 227 419 7.6E-14 T 11-10-2018 AVL55_12830 85aac6977141d74f20f8d4d08de427d6 486 Gene3D G3DSA:3.40.1090.20 146 224 2.9E-8 T 11-10-2018 AVL55_12830 85aac6977141d74f20f8d4d08de427d6 486 Pfam PF01734 Patatin-like phospholipase 148 330 1.9E-26 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AVL55_18665 937c4cd0deede2f1118ae10f295d5c55 95 Gene3D G3DSA:1.10.10.710 21 89 1.9E-12 T 11-10-2018 IPR038627 YebG-like superfamily AVL55_18665 937c4cd0deede2f1118ae10f295d5c55 95 Pfam PF07130 YebG protein 1 74 1.2E-28 T 11-10-2018 IPR009813 Uncharacterised protein family YebG AVL55_09175 79dfc62af319db85e1ba3d6d1c3b790a 272 Pfam PF10977 Protein of unknown function (DUF2797) 33 268 3.5E-92 T 11-10-2018 IPR021246 Protein of unknown function DUF2797 AVL55_06160 ebd8a37c1dec6faff462553dab56fca7 652 Gene3D G3DSA:3.40.50.300 399 652 6.4E-43 T 11-10-2018 AVL55_06160 ebd8a37c1dec6faff462553dab56fca7 652 Pfam PF14559 Tetratricopeptide repeat 81 143 9.4E-6 T 11-10-2018 AVL55_06160 ebd8a37c1dec6faff462553dab56fca7 652 SMART SM00028 103 136 0.33 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_06160 ebd8a37c1dec6faff462553dab56fca7 652 SMART SM00028 69 102 2.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_06160 ebd8a37c1dec6faff462553dab56fca7 652 SMART SM00028 204 237 14.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_06160 ebd8a37c1dec6faff462553dab56fca7 652 SUPERFAMILY SSF52540 405 632 4.05E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06160 ebd8a37c1dec6faff462553dab56fca7 652 SUPERFAMILY SSF48452 203 367 1.2E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_06160 ebd8a37c1dec6faff462553dab56fca7 652 Pfam PF13469 Sulfotransferase family 411 594 1.6E-26 T 11-10-2018 AVL55_06160 ebd8a37c1dec6faff462553dab56fca7 652 SUPERFAMILY SSF48452 35 234 5.31E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_08980 d61920ed5d245b93c438e25af548376e 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 156 1.0E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_08980 d61920ed5d245b93c438e25af548376e 731 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 57 731 9.4E-85 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AVL55_08980 d61920ed5d245b93c438e25af548376e 731 SUPERFAMILY SSF56935 30 731 3.66E-114 T 11-10-2018 AVL55_08980 d61920ed5d245b93c438e25af548376e 731 Gene3D G3DSA:2.170.130.10 46 165 8.8E-24 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_08980 d61920ed5d245b93c438e25af548376e 731 Gene3D G3DSA:2.40.170.20 166 731 1.4E-110 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_08980 d61920ed5d245b93c438e25af548376e 731 Pfam PF00593 TonB dependent receptor 229 730 4.7E-53 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_06060 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 165 6.2E-45 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AVL55_06060 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 Gene3D G3DSA:3.40.140.10 41 165 2.7E-45 T 11-10-2018 AVL55_06060 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 Pfam PF04002 RadC-like JAB domain 44 163 2.2E-44 T 11-10-2018 IPR025657 RadC-like JAB domain AVL55_06060 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AVL55_06060 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 SUPERFAMILY SSF102712 57 132 1.44E-6 T 11-10-2018 AVL55_05685 4d70e06258d4ddcfb49ef995252e4df1 207 Pfam PF02796 Helix-turn-helix domain of resolvase 161 199 3.5E-6 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AVL55_05685 4d70e06258d4ddcfb49ef995252e4df1 207 Pfam PF00239 Resolvase, N terminal domain 5 157 1.0E-24 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AVL55_05685 4d70e06258d4ddcfb49ef995252e4df1 207 SUPERFAMILY SSF53041 1 159 3.14E-28 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AVL55_05685 4d70e06258d4ddcfb49ef995252e4df1 207 Gene3D G3DSA:3.40.50.1390 3 141 1.5E-27 T 11-10-2018 AVL55_05685 4d70e06258d4ddcfb49ef995252e4df1 207 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AVL55_05685 4d70e06258d4ddcfb49ef995252e4df1 207 SMART SM00857 3 159 3.0E-29 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AVL55_03325 f845f8853fb1abefd237acdd9e6aeefc 275 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 8 267 56.363 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AVL55_03325 f845f8853fb1abefd237acdd9e6aeefc 275 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 265 7.4E-90 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AVL55_03325 f845f8853fb1abefd237acdd9e6aeefc 275 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 40 67 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AVL55_03325 f845f8853fb1abefd237acdd9e6aeefc 275 Gene3D G3DSA:3.40.50.150 2 201 1.7E-64 T 11-10-2018 AVL55_03325 f845f8853fb1abefd237acdd9e6aeefc 275 SMART SM00650 24 200 6.0E-85 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AVL55_03325 f845f8853fb1abefd237acdd9e6aeefc 275 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 265 1.9E-77 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AVL55_03325 f845f8853fb1abefd237acdd9e6aeefc 275 SUPERFAMILY SSF53335 7 266 1.74E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_03325 f845f8853fb1abefd237acdd9e6aeefc 275 Gene3D G3DSA:1.10.8.100 203 269 3.7E-23 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AVL55_16320 43710720cb2549065e4347d73eb9754c 362 SUPERFAMILY SSF52540 3 240 1.77E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16320 43710720cb2549065e4347d73eb9754c 362 Pfam PF00005 ABC transporter 18 160 5.0E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_16320 43710720cb2549065e4347d73eb9754c 362 SUPERFAMILY SSF50331 236 353 2.52E-23 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AVL55_16320 43710720cb2549065e4347d73eb9754c 362 SMART SM00382 27 212 0.0013 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_16320 43710720cb2549065e4347d73eb9754c 362 Gene3D G3DSA:2.40.50.140 277 339 2.4E-13 T 11-10-2018 AVL55_16320 43710720cb2549065e4347d73eb9754c 362 Gene3D G3DSA:2.40.50.100 238 349 2.4E-13 T 11-10-2018 AVL55_16320 43710720cb2549065e4347d73eb9754c 362 Gene3D G3DSA:3.40.50.300 1 236 1.4E-56 T 11-10-2018 AVL55_11840 dd04037f1a39b6ff28d2b73d1d55c64a 733 SUPERFAMILY SSF52540 195 699 1.34E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11840 dd04037f1a39b6ff28d2b73d1d55c64a 733 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 32 716 5.4E-121 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AVL55_11840 dd04037f1a39b6ff28d2b73d1d55c64a 733 Pfam PF13538 UvrD-like helicase C-terminal domain 643 693 1.2E-13 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain AVL55_11840 dd04037f1a39b6ff28d2b73d1d55c64a 733 Gene3D G3DSA:3.40.50.300 152 394 2.4E-58 T 11-10-2018 AVL55_11840 dd04037f1a39b6ff28d2b73d1d55c64a 733 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 18 716 44.397 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AVL55_11840 dd04037f1a39b6ff28d2b73d1d55c64a 733 Gene3D G3DSA:3.40.50.300 611 707 2.6E-22 T 11-10-2018 AVL55_11840 dd04037f1a39b6ff28d2b73d1d55c64a 733 Gene3D G3DSA:3.40.50.300 438 593 7.0E-7 T 11-10-2018 AVL55_11840 dd04037f1a39b6ff28d2b73d1d55c64a 733 Pfam PF13245 AAA domain 200 350 4.9E-28 T 11-10-2018 AVL55_02590 4fe25803fdf7885f360b5de7356b7bd8 165 PRINTS PR00070 Dihydrofolate reductase signature 95 109 1.4E-15 T 11-10-2018 AVL55_02590 4fe25803fdf7885f360b5de7356b7bd8 165 PRINTS PR00070 Dihydrofolate reductase signature 10 20 1.4E-15 T 11-10-2018 AVL55_02590 4fe25803fdf7885f360b5de7356b7bd8 165 PRINTS PR00070 Dihydrofolate reductase signature 24 32 1.4E-15 T 11-10-2018 AVL55_02590 4fe25803fdf7885f360b5de7356b7bd8 165 PRINTS PR00070 Dihydrofolate reductase signature 37 48 1.4E-15 T 11-10-2018 AVL55_02590 4fe25803fdf7885f360b5de7356b7bd8 165 Pfam PF00186 Dihydrofolate reductase 1 164 1.7E-59 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AVL55_02590 4fe25803fdf7885f360b5de7356b7bd8 165 SUPERFAMILY SSF53597 1 164 1.83E-56 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AVL55_02590 4fe25803fdf7885f360b5de7356b7bd8 165 Gene3D G3DSA:3.40.430.10 1 165 2.8E-58 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AVL55_02590 4fe25803fdf7885f360b5de7356b7bd8 165 PIRSF PIRSF000194 1 165 1.1E-61 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 AVL55_15890 faeb9dc9b25f0e84831f789b91742e87 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 141 3.5E-20 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AVL55_15890 faeb9dc9b25f0e84831f789b91742e87 148 SUPERFAMILY SSF55961 1 143 2.15E-31 T 11-10-2018 AVL55_15890 faeb9dc9b25f0e84831f789b91742e87 148 Gene3D G3DSA:3.30.530.20 1 145 1.3E-31 T 11-10-2018 IPR023393 START-like domain superfamily AVL55_11610 988a9479eab29951b7d4883a68f8bf27 335 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 269 9.4E-31 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AVL55_11610 988a9479eab29951b7d4883a68f8bf27 335 Gene3D G3DSA:3.90.420.10 66 335 5.9E-116 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AVL55_11610 988a9479eab29951b7d4883a68f8bf27 335 SUPERFAMILY SSF56524 78 329 1.57E-91 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AVL55_11610 988a9479eab29951b7d4883a68f8bf27 335 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 335 54.244 T 11-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AVL55_15595 1e7ac846f9fe53c52afd993cb97be88b 212 SUPERFAMILY SSF89623 1 159 2.75E-36 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AVL55_15595 1e7ac846f9fe53c52afd993cb97be88b 212 Gene3D G3DSA:3.40.1400.10 1 212 5.3E-90 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AVL55_15595 1e7ac846f9fe53c52afd993cb97be88b 212 Pfam PF12408 Ribose-5-phosphate isomerase 168 210 6.2E-19 T 11-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal AVL55_15595 1e7ac846f9fe53c52afd993cb97be88b 212 Pfam PF02502 Ribose/Galactose Isomerase 3 124 2.3E-28 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AVL55_18030 16acfe8e50383e7e32515a9fec8ab478 229 Pfam PF00072 Response regulator receiver domain 5 116 8.4E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_18030 16acfe8e50383e7e32515a9fec8ab478 229 Gene3D G3DSA:1.10.10.10 128 229 2.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_18030 16acfe8e50383e7e32515a9fec8ab478 229 SMART SM00862 154 227 1.9E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_18030 16acfe8e50383e7e32515a9fec8ab478 229 TIGRFAM TIGR03787 marine_sort_RR: proteobacterial dedicated sortase system response regulator 3 228 4.3E-120 T 11-10-2018 IPR022305 Sortase system response regulator AVL55_18030 16acfe8e50383e7e32515a9fec8ab478 229 SMART SM00448 3 116 1.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_18030 16acfe8e50383e7e32515a9fec8ab478 229 Gene3D G3DSA:3.40.50.2300 1 124 2.5E-27 T 11-10-2018 AVL55_18030 16acfe8e50383e7e32515a9fec8ab478 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 226 6.1E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AVL55_18030 16acfe8e50383e7e32515a9fec8ab478 229 SUPERFAMILY SSF46894 136 227 5.67E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AVL55_18030 16acfe8e50383e7e32515a9fec8ab478 229 SUPERFAMILY SSF52172 2 134 1.39E-29 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_08525 fde01dd5cd1919bacab8fe5d68c2a493 239 Pfam PF00929 Exonuclease 4 167 3.5E-42 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_08525 fde01dd5cd1919bacab8fe5d68c2a493 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 2.1E-98 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_08525 fde01dd5cd1919bacab8fe5d68c2a493 239 Gene3D G3DSA:3.20.20.140 198 239 1.8E-5 T 11-10-2018 AVL55_08525 fde01dd5cd1919bacab8fe5d68c2a493 239 SMART SM00479 2 176 2.0E-51 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_08525 fde01dd5cd1919bacab8fe5d68c2a493 239 SUPERFAMILY SSF53098 1 177 6.15E-58 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_08525 fde01dd5cd1919bacab8fe5d68c2a493 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 215 1.4E-77 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AVL55_08525 fde01dd5cd1919bacab8fe5d68c2a493 239 Gene3D G3DSA:3.30.420.10 1 183 5.7E-59 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_16805 322605da7ac1cc89cbf0a06bf4b5d5e9 183 Gene3D G3DSA:1.20.120.20 22 182 2.7E-5 T 11-10-2018 AVL55_16805 322605da7ac1cc89cbf0a06bf4b5d5e9 183 SUPERFAMILY SSF58113 42 160 3.14E-5 T 11-10-2018 AVL55_05045 d8b766368801cd7150109ef1bc4bb878 626 Pfam PF13537 Glutamine amidotransferase domain 47 165 1.1E-44 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AVL55_05045 d8b766368801cd7150109ef1bc4bb878 626 SUPERFAMILY SSF56235 1 225 3.95E-60 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_05045 d8b766368801cd7150109ef1bc4bb878 626 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 506 9.1E-130 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AVL55_05045 d8b766368801cd7150109ef1bc4bb878 626 SUPERFAMILY SSF52402 231 613 1.58E-65 T 11-10-2018 AVL55_05045 d8b766368801cd7150109ef1bc4bb878 626 Pfam PF00733 Asparagine synthase 242 619 8.6E-97 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AVL55_05045 d8b766368801cd7150109ef1bc4bb878 626 PIRSF PIRSF001589 1 626 2.7E-145 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AVL55_05045 d8b766368801cd7150109ef1bc4bb878 626 Gene3D G3DSA:3.60.20.10 4 187 2.5E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_11305 9c25da406a5868bbeca6580272d6a409 216 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 7 192 31.502 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AVL55_11305 9c25da406a5868bbeca6580272d6a409 216 Pfam PF00551 Formyl transferase 7 186 1.2E-60 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_11305 9c25da406a5868bbeca6580272d6a409 216 SUPERFAMILY SSF53328 7 204 2.09E-68 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AVL55_11305 9c25da406a5868bbeca6580272d6a409 216 Gene3D G3DSA:3.40.50.170 6 216 2.7E-85 T 11-10-2018 AVL55_11305 9c25da406a5868bbeca6580272d6a409 216 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 7 195 1.2E-72 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AVL55_19220 5e139db6494dc81e33bbde8f5a7414ed 209 Gene3D G3DSA:2.30.110.10 7 206 1.4E-38 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AVL55_19220 5e139db6494dc81e33bbde8f5a7414ed 209 Pfam PF01613 Flavin reductase like domain 33 164 5.0E-13 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AVL55_19220 5e139db6494dc81e33bbde8f5a7414ed 209 SUPERFAMILY SSF50475 27 193 1.13E-26 T 11-10-2018 AVL55_07885 92295b3caed403e30f0f72a3559938ac 216 Gene3D G3DSA:3.40.50.360 13 194 6.5E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_07885 92295b3caed403e30f0f72a3559938ac 216 Pfam PF02525 Flavodoxin-like fold 18 186 2.1E-42 T 11-10-2018 IPR003680 Flavodoxin-like fold AVL55_07885 92295b3caed403e30f0f72a3559938ac 216 SUPERFAMILY SSF52218 18 193 9.91E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_10330 ddccd7cf78532fc2ad305d740a0ad2d1 394 Pfam PF01757 Acyltransferase family 7 366 2.5E-20 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 Pfam PF00158 Sigma-54 interaction domain 133 296 9.0E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 SUPERFAMILY SSF46689 342 435 1.65E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 Pfam PF02954 Bacterial regulatory protein, Fis family 399 435 3.1E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 SUPERFAMILY SSF52540 137 370 9.16E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 Gene3D G3DSA:1.10.8.60 301 376 4.1E-25 T 11-10-2018 AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 SUPERFAMILY SSF52172 1 173 5.83E-41 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 SMART SM00382 149 293 5.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 Gene3D G3DSA:1.10.10.60 377 441 6.8E-10 T 11-10-2018 AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 Gene3D G3DSA:3.40.50.2300 4 119 6.0E-33 T 11-10-2018 AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 Gene3D G3DSA:3.40.50.300 120 300 1.8E-63 T 11-10-2018 AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 Pfam PF00072 Response regulator receiver domain 6 114 5.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_05110 f4affb5b617bf8c8bc85205f7c67c655 445 SMART SM00448 4 115 7.4E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_00135 79c9e6566503f9d85253edf729bb2030 224 SUPERFAMILY SSF56925 24 224 1.12E-29 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AVL55_00135 79c9e6566503f9d85253edf729bb2030 224 Gene3D G3DSA:2.40.160.20 23 224 4.4E-72 T 11-10-2018 AVL55_00135 79c9e6566503f9d85253edf729bb2030 224 Pfam PF03922 OmpW family 24 224 2.1E-58 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AVL55_06820 ba91339cb5191ce5e215910e6639e21b 132 PIRSF PIRSF003230 1 132 8.9E-46 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AVL55_06820 ba91339cb5191ce5e215910e6639e21b 132 SUPERFAMILY SSF54637 2 125 4.67E-38 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_06820 ba91339cb5191ce5e215910e6639e21b 132 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 2 125 2.7E-49 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AVL55_06820 ba91339cb5191ce5e215910e6639e21b 132 Gene3D G3DSA:3.10.129.10 1 131 1.0E-40 T 11-10-2018 AVL55_06820 ba91339cb5191ce5e215910e6639e21b 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 120 1.3E-37 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AVL55_06820 ba91339cb5191ce5e215910e6639e21b 132 Pfam PF03061 Thioesterase superfamily 16 99 9.6E-16 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AVL55_02380 34328ef31e33ae44272000459f44711e 445 Pfam PF13372 Alginate export 44 428 9.3E-37 T 11-10-2018 IPR025388 Alginate export domain AVL55_02920 7afd4be84b190d47568bbb7199f2d531 213 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 25 206 3.4E-32 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AVL55_02920 7afd4be84b190d47568bbb7199f2d531 213 Gene3D G3DSA:2.60.120.590 8 211 2.5E-63 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily AVL55_02920 7afd4be84b190d47568bbb7199f2d531 213 SUPERFAMILY SSF51197 17 208 7.42E-63 T 11-10-2018 AVL55_06550 970906a56260b04405993829119414b1 606 Pfam PF13584 Oxygen tolerance 19 467 2.4E-102 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD AVL55_06635 bea76abd8fac310a9eb26130d25f083e 688 SUPERFAMILY SSF63825 94 331 9.42E-9 T 11-10-2018 AVL55_06635 bea76abd8fac310a9eb26130d25f083e 688 Gene3D G3DSA:2.120.10.30 107 265 4.2E-6 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_06635 bea76abd8fac310a9eb26130d25f083e 688 SUPERFAMILY SSF63825 409 659 5.23E-11 T 11-10-2018 AVL55_03145 5e822cb8f6d022588158fe476300b9f2 164 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 8 131 4.4E-24 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AVL55_03145 5e822cb8f6d022588158fe476300b9f2 164 Gene3D G3DSA:3.30.70.560 4 157 4.2E-35 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AVL55_03145 5e822cb8f6d022588158fe476300b9f2 164 SUPERFAMILY SSF55083 4 157 3.14E-40 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AVL55_03145 5e822cb8f6d022588158fe476300b9f2 164 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 7 131 8.3E-24 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AVL55_14560 bc2e729c2919685c0f3f6484f2d0dd8f 266 Gene3D G3DSA:1.10.10.10 9 78 3.5E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_17070 5320b3466e0b45fcf23a4d60b8c03c51 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 5.8E-186 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AVL55_17070 5320b3466e0b45fcf23a4d60b8c03c51 446 Pfam PF11973 NQRA C-terminal domain 261 309 1.5E-19 T 11-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AVL55_17070 5320b3466e0b45fcf23a4d60b8c03c51 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 1.9E-109 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AVL55_17070 5320b3466e0b45fcf23a4d60b8c03c51 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 45.087 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AVL55_15430 f75d94ac10b0b6a78e67dfd365b49ed4 149 Gene3D G3DSA:2.60.40.3340 22 149 3.9E-40 T 11-10-2018 AVL55_15430 f75d94ac10b0b6a78e67dfd365b49ed4 149 Pfam PF14467 Domain of unknown function (DUF4426) 31 148 3.6E-45 T 11-10-2018 IPR025218 Domain of unknown function DUF4426 AVL55_03750 71969af49604932daad15e5542e21551 789 Gene3D G3DSA:3.40.50.300 351 649 1.6E-11 T 11-10-2018 AVL55_03750 71969af49604932daad15e5542e21551 789 SUPERFAMILY SSF52540 8 635 4.25E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_03750 71969af49604932daad15e5542e21551 789 Gene3D G3DSA:3.40.50.300 2 278 1.1E-7 T 11-10-2018 AVL55_03750 71969af49604932daad15e5542e21551 789 Pfam PF13166 AAA domain 11 629 2.9E-36 T 11-10-2018 IPR026866 Protein CR006, P-loop domain AVL55_13050 90055f4faaec56a60c7469925e75d209 281 Pfam PF01226 Formate/nitrite transporter 39 272 6.2E-34 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AVL55_13050 90055f4faaec56a60c7469925e75d209 281 Gene3D G3DSA:1.20.1080.10 29 280 1.1E-29 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AVL55_05675 e3ee06a277f8f365913ed7a64faff6a1 115 Pfam PF02411 MerT mercuric transport protein 4 115 2.2E-48 T 11-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 AVL55_01070 167ced58c3cffeaf44c4f4d6ac81f0bf 300 Pfam PF04085 rod shape-determining protein MreC 125 269 1.4E-34 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AVL55_01070 167ced58c3cffeaf44c4f4d6ac81f0bf 300 Gene3D G3DSA:2.40.10.340 121 266 1.9E-33 T 11-10-2018 AVL55_01070 167ced58c3cffeaf44c4f4d6ac81f0bf 300 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 2 276 1.5E-69 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AVL55_01070 167ced58c3cffeaf44c4f4d6ac81f0bf 300 Gene3D G3DSA:2.40.10.350 180 257 1.9E-33 T 11-10-2018 AVL55_01070 167ced58c3cffeaf44c4f4d6ac81f0bf 300 PIRSF PIRSF038471 2 284 1.1E-76 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AVL55_00365 5d5ee491578c03984e98bb1de27e9d67 135 SUPERFAMILY SSF46626 55 132 3.84E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_00365 5d5ee491578c03984e98bb1de27e9d67 135 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 131 2.1E-16 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_00365 5d5ee491578c03984e98bb1de27e9d67 135 PRINTS PR00607 Class IE cytochrome C signature 106 118 1.8E-16 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AVL55_00365 5d5ee491578c03984e98bb1de27e9d67 135 PRINTS PR00607 Class IE cytochrome C signature 121 132 1.8E-16 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AVL55_00365 5d5ee491578c03984e98bb1de27e9d67 135 PRINTS PR00607 Class IE cytochrome C signature 66 77 1.8E-16 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AVL55_00365 5d5ee491578c03984e98bb1de27e9d67 135 PRINTS PR00607 Class IE cytochrome C signature 77 87 1.8E-16 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AVL55_00365 5d5ee491578c03984e98bb1de27e9d67 135 Gene3D G3DSA:1.10.760.10 53 133 9.3E-32 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_05115 375e0bf2e6efc03888bd775ee42fd38d 111 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 7 111 15.459 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AVL55_05115 375e0bf2e6efc03888bd775ee42fd38d 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 96 109 1.1E-9 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AVL55_05115 375e0bf2e6efc03888bd775ee42fd38d 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 40 56 1.1E-9 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AVL55_05115 375e0bf2e6efc03888bd775ee42fd38d 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 75 91 1.1E-9 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AVL55_05115 375e0bf2e6efc03888bd775ee42fd38d 111 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 6 110 6.0E-17 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AVL55_05115 375e0bf2e6efc03888bd775ee42fd38d 111 Pfam PF02049 Flagellar hook-basal body complex protein FliE 27 111 2.1E-27 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AVL55_07270 07f48b13e1f4c985c7fd3d7474046e4d 469 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AVL55_07270 07f48b13e1f4c985c7fd3d7474046e4d 469 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 258 469 31.84 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AVL55_07270 07f48b13e1f4c985c7fd3d7474046e4d 469 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 257 33.596 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AVL55_07270 07f48b13e1f4c985c7fd3d7474046e4d 469 Gene3D G3DSA:3.20.20.70 8 258 2.4E-165 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07270 07f48b13e1f4c985c7fd3d7474046e4d 469 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 260 463 1.6E-48 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AVL55_07270 07f48b13e1f4c985c7fd3d7474046e4d 469 SUPERFAMILY SSF51366 1 256 1.65E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AVL55_07270 07f48b13e1f4c985c7fd3d7474046e4d 469 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 255 5.0E-87 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AVL55_07270 07f48b13e1f4c985c7fd3d7474046e4d 469 Gene3D G3DSA:3.20.20.70 259 463 2.4E-165 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07270 07f48b13e1f4c985c7fd3d7474046e4d 469 SUPERFAMILY SSF51366 259 467 6.28E-51 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AVL55_16065 96cf0d9c591ddb55c1cdfc8dd4cd691f 140 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 1.1E-32 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AVL55_16065 96cf0d9c591ddb55c1cdfc8dd4cd691f 140 Gene3D G3DSA:3.40.50.10110 1 139 3.8E-40 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AVL55_16065 96cf0d9c591ddb55c1cdfc8dd4cd691f 140 SUPERFAMILY SSF102400 1 137 3.27E-36 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AVL55_16695 e82f36b48b92bad75a811ad11ea114f4 154 Gene3D G3DSA:3.30.70.330 53 154 3.6E-23 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AVL55_16695 e82f36b48b92bad75a811ad11ea114f4 154 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 74 143 3.5E-14 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AVL55_16695 e82f36b48b92bad75a811ad11ea114f4 154 SUPERFAMILY SSF54928 60 151 3.76E-22 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AVL55_16695 e82f36b48b92bad75a811ad11ea114f4 154 SMART SM00360 73 145 3.0E-16 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AVL55_14720 fe845b86812c97425f2a7c7793d0425e 213 SUPERFAMILY SSF52833 37 209 1.21E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_14720 fe845b86812c97425f2a7c7793d0425e 213 Gene3D G3DSA:3.40.30.10 31 213 1.6E-29 T 11-10-2018 AVL55_14720 fe845b86812c97425f2a7c7793d0425e 213 Pfam PF00578 AhpC/TSA family 42 184 9.1E-23 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_15085 9c381f646d1684491f3ecc2a3e19bfe2 274 SUPERFAMILY SSF109604 5 269 1.95E-46 T 11-10-2018 AVL55_15085 9c381f646d1684491f3ecc2a3e19bfe2 274 Gene3D G3DSA:1.10.3210.10 1 273 2.7E-49 T 11-10-2018 AVL55_15085 9c381f646d1684491f3ecc2a3e19bfe2 274 Pfam PF08668 HDOD domain 15 203 5.5E-43 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AVL55_01970 e3930da9987facb157da39ae646b3919 491 ProSitePatterns PS00438 Catalase proximal active site signature. 53 69 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 PRINTS PR00067 Catalase signature 93 111 2.1E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 PRINTS PR00067 Catalase signature 30 53 2.1E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 PRINTS PR00067 Catalase signature 295 322 2.1E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 PRINTS PR00067 Catalase signature 133 151 2.1E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 PRINTS PR00067 Catalase signature 114 131 2.1E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 PRINTS PR00067 Catalase signature 327 353 2.1E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 SUPERFAMILY SSF56634 13 488 8.37E-194 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 SMART SM01060 17 400 1.2E-248 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 Pfam PF06628 Catalase-related immune-responsive 428 488 2.9E-19 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 PIRSF PIRSF038928 7 491 2.0E-202 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 Pfam PF00199 Catalase 17 394 7.4E-176 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01970 e3930da9987facb157da39ae646b3919 491 Gene3D G3DSA:2.40.180.10 12 491 2.3E-206 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 PIRSF PIRSF002869 2 517 1.9E-156 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 Pfam PF03023 MviN-like protein 30 471 2.5E-146 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 509 1.6E-139 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 PRINTS PR01806 Virulence factor MviN signature 166 187 6.5E-79 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 PRINTS PR01806 Virulence factor MviN signature 54 70 6.5E-79 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 PRINTS PR01806 Virulence factor MviN signature 268 294 6.5E-79 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 PRINTS PR01806 Virulence factor MviN signature 35 54 6.5E-79 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 PRINTS PR01806 Virulence factor MviN signature 418 435 6.5E-79 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 PRINTS PR01806 Virulence factor MviN signature 142 166 6.5E-79 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 PRINTS PR01806 Virulence factor MviN signature 366 385 6.5E-79 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_13575 889efa2a10ee9da22f6f9c38cb81c6c8 519 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 20.157 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AVL55_17465 17072fb0a7caf1d126b35dd35137ad4f 638 Gene3D G3DSA:1.10.150.400 410 492 1.2E-15 T 11-10-2018 AVL55_17465 17072fb0a7caf1d126b35dd35137ad4f 638 SUPERFAMILY SSF56784 397 607 2.45E-8 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_17465 17072fb0a7caf1d126b35dd35137ad4f 638 Pfam PF05045 Rhamnan synthesis protein F 122 360 4.8E-56 T 11-10-2018 IPR007739 Rhamnan synthesis F AVL55_17465 17072fb0a7caf1d126b35dd35137ad4f 638 Gene3D G3DSA:3.40.50.1000 399 599 1.2E-15 T 11-10-2018 IPR023214 HAD superfamily AVL55_11235 b80e22afc2ddb6d224ec2464d30c9b70 367 Pfam PF06804 NlpB/DapX lipoprotein 33 360 7.8E-99 T 11-10-2018 IPR010653 NlpB/DapX lipoprotein AVL55_11235 b80e22afc2ddb6d224ec2464d30c9b70 367 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 2 361 37.986 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC AVL55_11235 b80e22afc2ddb6d224ec2464d30c9b70 367 Gene3D G3DSA:3.30.310.170 242 366 1.6E-35 T 11-10-2018 AVL55_01945 7f96c3d35d65b8dd7f6252efde78af1d 887 Gene3D G3DSA:1.10.3810.10 48 242 2.2E-75 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_01945 7f96c3d35d65b8dd7f6252efde78af1d 887 SUPERFAMILY SSF53955 43 255 3.37E-74 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AVL55_01945 7f96c3d35d65b8dd7f6252efde78af1d 887 Pfam PF00912 Transglycosylase 55 229 1.5E-60 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_01945 7f96c3d35d65b8dd7f6252efde78af1d 887 Pfam PF17092 Penicillin-binding protein OB-like domain 348 449 3.7E-25 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_01945 7f96c3d35d65b8dd7f6252efde78af1d 887 Gene3D G3DSA:3.40.710.10 243 327 5.5E-6 T 11-10-2018 AVL55_01945 7f96c3d35d65b8dd7f6252efde78af1d 887 Pfam PF00905 Penicillin binding protein transpeptidase domain 451 634 8.8E-25 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AVL55_01945 7f96c3d35d65b8dd7f6252efde78af1d 887 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 773 4.7E-162 T 11-10-2018 AVL55_01945 7f96c3d35d65b8dd7f6252efde78af1d 887 SUPERFAMILY SSF56601 211 865 1.47E-109 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 Gene3D G3DSA:3.30.565.10 364 517 2.5E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 SMART SM00388 296 363 2.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 SMART SM00387 408 516 4.4E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 513 3.8E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 SMART SM00304 211 263 2.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 Pfam PF00512 His Kinase A (phospho-acceptor) domain 297 361 9.0E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 1.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 1.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 1.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 1.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 SUPERFAMILY SSF47384 281 363 4.12E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 SUPERFAMILY SSF158472 213 260 4.45E-6 T 11-10-2018 AVL55_08625 fee6993865bdae366d8eeb8abf91b6e6 523 SUPERFAMILY SSF55874 352 514 5.24E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03385 650fc07f2845a75adf7970734df0bc4f 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 95 1.0E-21 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AVL55_03385 650fc07f2845a75adf7970734df0bc4f 126 SUPERFAMILY SSF56214 3 124 1.83E-29 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AVL55_03385 650fc07f2845a75adf7970734df0bc4f 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 1.9E-28 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AVL55_03385 650fc07f2845a75adf7970734df0bc4f 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 120 2.3E-22 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AVL55_03385 650fc07f2845a75adf7970734df0bc4f 126 Gene3D G3DSA:3.90.470.20 2 125 1.9E-37 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AVL55_03385 650fc07f2845a75adf7970734df0bc4f 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 125 4.2E-38 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AVL55_03385 650fc07f2845a75adf7970734df0bc4f 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 125 23.001 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 SUPERFAMILY SSF54373 211 305 2.2E-35 T 11-10-2018 AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 SUPERFAMILY SSF51905 4 448 5.38E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 546 2.6E-51 T 11-10-2018 AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 Gene3D G3DSA:3.50.50.60 7 386 1.8E-200 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.5E-5 T 11-10-2018 AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 Gene3D G3DSA:3.30.70.20 451 544 2.7E-39 T 11-10-2018 AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 4.5E-6 T 11-10-2018 AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 4.5E-6 T 11-10-2018 AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 Gene3D G3DSA:3.30.9.90 79 450 1.8E-200 T 11-10-2018 AVL55_11500 f7f6fba8a53c9f5385f56e27ff3eb7cd 549 SUPERFAMILY SSF54862 450 549 1.09E-28 T 11-10-2018 AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 4.3E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 4.3E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 4.3E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 4.3E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 4.3E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 TIGRFAM TIGR03356 BGL: beta-galactosidase 14 437 4.7E-175 T 11-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 11-10-2018 IPR018120 Glycoside hydrolase family 1, active site AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 SUPERFAMILY SSF51445 14 443 3.19E-147 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 Pfam PF00232 Glycosyl hydrolase family 1 14 443 1.4E-143 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AVL55_19930 610691ce84953adf10ffaacf5b88005d 445 Gene3D G3DSA:3.20.20.80 11 445 2.6E-155 T 11-10-2018 AVL55_02320 71391ba93a6109ce9988dc9d5a92a7fa 458 Pfam PF03553 Na+/H+ antiporter family 171 452 3.5E-46 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AVL55_03000 d65d9155574c6789e292d88b6f9f704b 331 Gene3D G3DSA:1.10.3720.10 114 321 2.0E-22 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_03000 d65d9155574c6789e292d88b6f9f704b 331 SUPERFAMILY SSF161098 115 314 1.96E-23 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_03000 d65d9155574c6789e292d88b6f9f704b 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 139 322 1.4E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_01020 f94929e8a1483c4c6f005d95b6086a8c 858 SUPERFAMILY SSF51445 37 333 4.3E-36 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_01020 f94929e8a1483c4c6f005d95b6086a8c 858 Gene3D G3DSA:3.20.20.80 38 365 1.0E-37 T 11-10-2018 AVL55_05175 c291d35ba65d96b31903911aca8a6174 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.1E-27 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AVL55_05175 c291d35ba65d96b31903911aca8a6174 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.5E-15 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AVL55_05175 c291d35ba65d96b31903911aca8a6174 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.5E-15 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AVL55_05175 c291d35ba65d96b31903911aca8a6174 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.5E-15 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AVL55_05175 c291d35ba65d96b31903911aca8a6174 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.3E-24 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AVL55_05175 c291d35ba65d96b31903911aca8a6174 89 PIRSF PIRSF004669 1 89 1.3E-26 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AVL55_17065 a48a017e216c51d4298c51819cc5d1aa 400 Pfam PF03116 NQR2, RnfD, RnfE family 42 392 3.5E-106 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AVL55_17065 a48a017e216c51d4298c51819cc5d1aa 400 PIRSF PIRSF016055 1 400 1.7E-193 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AVL55_17065 a48a017e216c51d4298c51819cc5d1aa 400 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 399 35.696 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AVL55_17065 a48a017e216c51d4298c51819cc5d1aa 400 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 395 3.5E-174 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AVL55_06880 c23d78400b2fdfa281ab494cbfd410e5 389 SUPERFAMILY SSF52151 23 236 1.1E-33 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AVL55_06880 c23d78400b2fdfa281ab494cbfd410e5 389 Pfam PF01734 Patatin-like phospholipase 28 208 4.4E-13 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AVL55_06880 c23d78400b2fdfa281ab494cbfd410e5 389 Gene3D G3DSA:3.40.1090.10 10 100 5.0E-11 T 11-10-2018 AVL55_06880 c23d78400b2fdfa281ab494cbfd410e5 389 Gene3D G3DSA:3.40.1090.10 101 270 1.8E-5 T 11-10-2018 AVL55_11870 3a9b24c2696f0d5b93b8105e3b4be7df 565 SUPERFAMILY SSF52540 1 362 1.66E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11870 3a9b24c2696f0d5b93b8105e3b4be7df 565 Pfam PF13175 AAA ATPase domain 1 359 1.1E-31 T 11-10-2018 AVL55_11870 3a9b24c2696f0d5b93b8105e3b4be7df 565 Gene3D G3DSA:3.40.50.300 1 377 2.5E-27 T 11-10-2018 AVL55_11135 fa221e7e61bb494ffabecf92594f561f 195 Pfam PF04471 Restriction endonuclease 72 166 8.5E-5 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AVL55_11135 fa221e7e61bb494ffabecf92594f561f 195 SUPERFAMILY SSF52980 73 179 1.39E-5 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AVL55_11115 96239dfa6dd8c8f3d025b661115bd37a 857 Gene3D G3DSA:3.40.50.300 622 848 8.9E-16 T 11-10-2018 AVL55_11115 96239dfa6dd8c8f3d025b661115bd37a 857 Pfam PF00580 UvrD/REP helicase N-terminal domain 131 611 7.2E-29 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AVL55_11115 96239dfa6dd8c8f3d025b661115bd37a 857 SUPERFAMILY SSF52540 122 818 5.97E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_11115 96239dfa6dd8c8f3d025b661115bd37a 857 Gene3D G3DSA:3.40.50.300 122 278 1.4E-19 T 11-10-2018 AVL55_11115 96239dfa6dd8c8f3d025b661115bd37a 857 Gene3D G3DSA:3.40.50.300 462 615 7.0E-18 T 11-10-2018 AVL55_11115 96239dfa6dd8c8f3d025b661115bd37a 857 Pfam PF13361 UvrD-like helicase C-terminal domain 740 817 9.7E-9 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AVL55_16475 df89016ce115209a1f6163aca4929a80 486 Pfam PF00149 Calcineurin-like phosphoesterase 167 371 1.7E-18 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AVL55_16475 df89016ce115209a1f6163aca4929a80 486 Gene3D G3DSA:3.60.21.10 163 449 8.2E-33 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AVL55_16475 df89016ce115209a1f6163aca4929a80 486 SUPERFAMILY SSF49363 12 157 8.24E-8 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AVL55_16475 df89016ce115209a1f6163aca4929a80 486 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 31 157 6.1E-14 T 11-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 AVL55_16475 df89016ce115209a1f6163aca4929a80 486 SUPERFAMILY SSF56300 167 454 1.69E-49 T 11-10-2018 AVL55_03500 d11f848b674c7ebc4ebbecaf067836be 210 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 22 204 2.4E-71 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AVL55_03500 d11f848b674c7ebc4ebbecaf067836be 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 132 143 2.6E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AVL55_03500 d11f848b674c7ebc4ebbecaf067836be 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 2.6E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AVL55_03500 d11f848b674c7ebc4ebbecaf067836be 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 176 188 2.6E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AVL55_03500 d11f848b674c7ebc4ebbecaf067836be 210 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 15 53 3.3E-17 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AVL55_03500 d11f848b674c7ebc4ebbecaf067836be 210 Gene3D G3DSA:1.20.5.510 13 53 1.6E-6 T 11-10-2018 AVL55_03500 d11f848b674c7ebc4ebbecaf067836be 210 Gene3D G3DSA:2.102.10.10 56 204 5.4E-47 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AVL55_03500 d11f848b674c7ebc4ebbecaf067836be 210 Pfam PF00355 Rieske [2Fe-2S] domain 124 189 4.9E-10 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AVL55_03500 d11f848b674c7ebc4ebbecaf067836be 210 SUPERFAMILY SSF50022 43 202 6.01E-40 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AVL55_15200 abb2f780124d662470fc7133e34f25d6 292 Pfam PF01551 Peptidase family M23 190 285 6.3E-31 T 11-10-2018 IPR016047 Peptidase M23 AVL55_15200 abb2f780124d662470fc7133e34f25d6 292 Gene3D G3DSA:2.70.70.10 131 291 4.9E-46 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_15200 abb2f780124d662470fc7133e34f25d6 292 SUPERFAMILY SSF51261 159 288 5.75E-52 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_00205 2f834c32363fe030121a31b6951d6b4f 495 SUPERFAMILY SSF56672 43 254 8.27E-37 T 11-10-2018 AVL55_00205 2f834c32363fe030121a31b6951d6b4f 495 Pfam PF00817 impB/mucB/samB family 41 105 2.6E-5 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_00205 2f834c32363fe030121a31b6951d6b4f 495 Gene3D G3DSA:2.30.40.20 49 90 8.2E-8 T 11-10-2018 AVL55_00205 2f834c32363fe030121a31b6951d6b4f 495 Gene3D G3DSA:3.30.70.270 91 247 8.2E-8 T 11-10-2018 AVL55_00205 2f834c32363fe030121a31b6951d6b4f 495 Gene3D G3DSA:1.10.150.20 195 246 8.2E-8 T 11-10-2018 AVL55_09095 29d6d3d4d8b72a8530ecc74a195b24fd 375 Gene3D G3DSA:3.40.50.620 3 222 5.2E-96 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_09095 29d6d3d4d8b72a8530ecc74a195b24fd 375 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 16 371 40.736 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AVL55_09095 29d6d3d4d8b72a8530ecc74a195b24fd 375 Gene3D G3DSA:2.40.30.10 292 374 4.4E-32 T 11-10-2018 AVL55_09095 29d6d3d4d8b72a8530ecc74a195b24fd 375 Gene3D G3DSA:2.30.30.280 223 291 1.5E-25 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AVL55_09095 29d6d3d4d8b72a8530ecc74a195b24fd 375 Pfam PF03054 tRNA methyl transferase 16 370 9.9E-143 T 11-10-2018 AVL55_09095 29d6d3d4d8b72a8530ecc74a195b24fd 375 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 16 370 8.1E-154 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AVL55_09095 29d6d3d4d8b72a8530ecc74a195b24fd 375 SUPERFAMILY SSF52402 15 254 5.95E-55 T 11-10-2018 AVL55_13065 26b9bf59b8f81191f92e07911672fc0c 864 Gene3D G3DSA:2.40.170.20 294 864 2.4E-65 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_13065 26b9bf59b8f81191f92e07911672fc0c 864 Gene3D G3DSA:2.170.130.10 33 175 1.9E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_13065 26b9bf59b8f81191f92e07911672fc0c 864 Pfam PF00593 TonB dependent receptor 337 863 1.8E-51 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_13065 26b9bf59b8f81191f92e07911672fc0c 864 SUPERFAMILY SSF56935 30 864 2.56E-109 T 11-10-2018 AVL55_13065 26b9bf59b8f81191f92e07911672fc0c 864 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 171 1.7E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_09665 f0fac5311b337f624ac64159b5dec4e5 646 Pfam PF00128 Alpha amylase, catalytic domain 182 498 4.7E-53 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_09665 f0fac5311b337f624ac64159b5dec4e5 646 Gene3D G3DSA:2.60.40.10 43 128 1.3E-20 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_09665 f0fac5311b337f624ac64159b5dec4e5 646 SUPERFAMILY SSF81296 44 131 5.18E-22 T 11-10-2018 IPR014756 Immunoglobulin E-set AVL55_09665 f0fac5311b337f624ac64159b5dec4e5 646 Gene3D G3DSA:3.20.20.80 136 555 1.3E-136 T 11-10-2018 AVL55_09665 f0fac5311b337f624ac64159b5dec4e5 646 SUPERFAMILY SSF51445 145 551 3.77E-97 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_09665 f0fac5311b337f624ac64159b5dec4e5 646 SMART SM00642 148 546 1.6E-64 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AVL55_09665 f0fac5311b337f624ac64159b5dec4e5 646 Pfam PF10438 Cyclo-malto-dextrinase C-terminal domain 557 643 1.1E-17 T 11-10-2018 IPR019492 Cyclo-malto-dextrinase, C-terminal AVL55_09665 f0fac5311b337f624ac64159b5dec4e5 646 Pfam PF09087 Cyclomaltodextrinase, N-terminal 46 130 1.2E-24 T 11-10-2018 IPR015171 Cyclomaltodextrinase, N-terminal AVL55_03955 7dbd11662e5c4fe2e46f1de51676e180 474 SUPERFAMILY SSF55874 330 470 5.89E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03955 7dbd11662e5c4fe2e46f1de51676e180 474 SMART SM00387 361 474 9.7E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03955 7dbd11662e5c4fe2e46f1de51676e180 474 SUPERFAMILY SSF47384 239 320 5.49E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_03955 7dbd11662e5c4fe2e46f1de51676e180 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 471 2.0E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_03955 7dbd11662e5c4fe2e46f1de51676e180 474 Gene3D G3DSA:3.30.565.10 325 474 1.5E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_03955 7dbd11662e5c4fe2e46f1de51676e180 474 Gene3D G3DSA:1.10.287.130 205 322 3.2E-8 T 11-10-2018 AVL55_03955 7dbd11662e5c4fe2e46f1de51676e180 474 SMART SM00388 255 321 0.0012 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_13325 c04dd2b810faaa263ce71bd52b0187f4 166 Pfam PF04608 Phosphatidylglycerophosphatase A 16 155 8.0E-49 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AVL55_13325 c04dd2b810faaa263ce71bd52b0187f4 166 PIRSF PIRSF006162 6 163 1.5E-51 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AVL55_13325 c04dd2b810faaa263ce71bd52b0187f4 166 SUPERFAMILY SSF101307 9 156 3.66E-42 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 AVL55_12730 e7d0c0847813a9552cf2fe586017ec38 185 Gene3D G3DSA:3.40.50.850 1 185 9.7E-44 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AVL55_12730 e7d0c0847813a9552cf2fe586017ec38 185 SUPERFAMILY SSF52499 1 185 8.77E-40 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AVL55_12730 e7d0c0847813a9552cf2fe586017ec38 185 Pfam PF00857 Isochorismatase family 9 160 4.9E-20 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AVL55_17160 f8b36bf81e2ad6475bc53a2f2af53543 229 Gene3D G3DSA:3.30.420.10 30 204 6.5E-27 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_17160 f8b36bf81e2ad6475bc53a2f2af53543 229 Pfam PF00929 Exonuclease 36 196 5.9E-10 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_17160 f8b36bf81e2ad6475bc53a2f2af53543 229 SMART SM00479 32 205 6.5E-8 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_17160 f8b36bf81e2ad6475bc53a2f2af53543 229 SUPERFAMILY SSF53098 25 203 1.9E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_00920 e5ea6b300c18b7cd5ec89bc66b182ebd 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AVL55_00920 e5ea6b300c18b7cd5ec89bc66b182ebd 445 Gene3D G3DSA:1.20.1250.20 3 386 6.2E-72 T 11-10-2018 AVL55_00920 e5ea6b300c18b7cd5ec89bc66b182ebd 445 SUPERFAMILY SSF103473 7 383 9.68E-57 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_00920 e5ea6b300c18b7cd5ec89bc66b182ebd 445 Pfam PF07690 Major Facilitator Superfamily 13 347 5.1E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_08925 822046ec7105dff1199bd1a7215a15a2 720 Pfam PF00593 TonB dependent receptor 256 719 1.6E-52 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_08925 822046ec7105dff1199bd1a7215a15a2 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 167 3.9E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_08925 822046ec7105dff1199bd1a7215a15a2 720 Gene3D G3DSA:2.40.170.20 177 720 1.6E-113 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_08925 822046ec7105dff1199bd1a7215a15a2 720 SUPERFAMILY SSF56935 37 720 5.07E-117 T 11-10-2018 AVL55_08925 822046ec7105dff1199bd1a7215a15a2 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 720 1.6E-79 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AVL55_08925 822046ec7105dff1199bd1a7215a15a2 720 Gene3D G3DSA:2.170.130.10 45 176 4.8E-24 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 SUPERFAMILY SSF52777 273 502 6.23E-89 T 11-10-2018 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 Gene3D G3DSA:4.10.320.10 206 248 2.4E-20 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 SUPERFAMILY SSF51230 1 94 7.72E-25 T 11-10-2018 IPR011053 Single hybrid motif AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 Pfam PF00364 Biotin-requiring enzyme 4 76 3.9E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 Pfam PF00364 Biotin-requiring enzyme 111 182 8.5E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 Pfam PF02817 e3 binding domain 210 243 1.1E-15 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 111 503 1.4E-180 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 272 501 1.1E-80 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 SUPERFAMILY SSF47005 205 248 8.11E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 134 163 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 Gene3D G3DSA:3.30.559.10 271 503 1.1E-96 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 Gene3D G3DSA:2.40.50.100 1 80 3.2E-21 T 11-10-2018 AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 SUPERFAMILY SSF51230 110 201 4.58E-23 T 11-10-2018 IPR011053 Single hybrid motif AVL55_09605 6b3e86f1c949dd8b207da3c01cc9793c 503 Gene3D G3DSA:2.40.50.100 104 205 1.9E-20 T 11-10-2018 AVL55_03870 4b763fbb3a68ec10344fc2fe1a47db95 487 SUPERFAMILY SSF116726 407 471 1.57E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_03870 4b763fbb3a68ec10344fc2fe1a47db95 487 Gene3D G3DSA:3.30.70.1450 392 481 1.3E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_03870 4b763fbb3a68ec10344fc2fe1a47db95 487 Pfam PF00999 Sodium/hydrogen exchanger family 10 385 1.0E-49 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AVL55_03870 4b763fbb3a68ec10344fc2fe1a47db95 487 Pfam PF02080 TrkA-C domain 415 471 8.4E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AVL55_03870 4b763fbb3a68ec10344fc2fe1a47db95 487 Gene3D G3DSA:1.20.1530.20 4 389 1.3E-17 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AVL55_15495 3a465b3164cf7a89d3cf5b8e7a5c4d0f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.546 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AVL55_15495 3a465b3164cf7a89d3cf5b8e7a5c4d0f 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 5.1E-93 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AVL55_05250 96cb9274d82c0613f41471211cc294e0 312 Gene3D G3DSA:3.40.50.880 1 301 9.8E-122 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_05250 96cb9274d82c0613f41471211cc294e0 312 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.3E-134 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 AVL55_05250 96cb9274d82c0613f41471211cc294e0 312 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-113 T 11-10-2018 AVL55_05250 96cb9274d82c0613f41471211cc294e0 312 PIRSF PIRSF000450 1 309 1.1E-138 T 11-10-2018 IPR033752 MetA family AVL55_05250 96cb9274d82c0613f41471211cc294e0 312 SUPERFAMILY SSF52317 18 297 8.86E-99 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_05250 96cb9274d82c0613f41471211cc294e0 312 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.399 T 11-10-2018 IPR033752 MetA family AVL55_05250 96cb9274d82c0613f41471211cc294e0 312 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.8E-131 T 11-10-2018 IPR033752 MetA family AVL55_16020 f92e124d456e6056ccbd529d921d385f 379 Pfam PF13487 HD domain 260 321 7.0E-15 T 11-10-2018 AVL55_16020 f92e124d456e6056ccbd529d921d385f 379 SUPERFAMILY SSF47226 12 121 9.29E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_16020 f92e124d456e6056ccbd529d921d385f 379 Pfam PF01627 Hpt domain 13 104 4.9E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_16020 f92e124d456e6056ccbd529d921d385f 379 SMART SM00073 10 107 3.2E-12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_16020 f92e124d456e6056ccbd529d921d385f 379 Gene3D G3DSA:1.10.3210.10 189 375 2.1E-43 T 11-10-2018 AVL55_16020 f92e124d456e6056ccbd529d921d385f 379 Gene3D G3DSA:1.20.120.160 7 149 3.0E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_16020 f92e124d456e6056ccbd529d921d385f 379 SUPERFAMILY SSF109604 196 368 4.71E-19 T 11-10-2018 AVL55_17765 d854710a40fe1c004497161592b793c9 660 Pfam PF08308 PEGA domain 184 251 7.2E-15 T 11-10-2018 IPR013229 PEGA AVL55_17765 d854710a40fe1c004497161592b793c9 660 Pfam PF08308 PEGA domain 329 381 8.5E-12 T 11-10-2018 IPR013229 PEGA AVL55_17765 d854710a40fe1c004497161592b793c9 660 Pfam PF03781 Sulfatase-modifying factor enzyme 1 414 657 8.9E-38 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AVL55_17765 d854710a40fe1c004497161592b793c9 660 Gene3D G3DSA:3.90.1580.10 400 657 1.0E-48 T 11-10-2018 AVL55_17765 d854710a40fe1c004497161592b793c9 660 SUPERFAMILY SSF56436 404 657 7.06E-44 T 11-10-2018 IPR016187 C-type lectin fold AVL55_16665 86cc372e3a401c4d6d24def8b8fd4853 579 Gene3D G3DSA:3.40.50.12780 24 465 3.6E-119 T 11-10-2018 AVL55_16665 86cc372e3a401c4d6d24def8b8fd4853 579 Pfam PF00501 AMP-binding enzyme 36 472 1.4E-109 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AVL55_16665 86cc372e3a401c4d6d24def8b8fd4853 579 ProSitePatterns PS00455 Putative AMP-binding domain signature. 222 233 - T 11-10-2018 IPR020845 AMP-binding, conserved site AVL55_16665 86cc372e3a401c4d6d24def8b8fd4853 579 Gene3D G3DSA:3.30.300.30 466 570 1.2E-30 T 11-10-2018 AVL55_16665 86cc372e3a401c4d6d24def8b8fd4853 579 Pfam PF13193 AMP-binding enzyme C-terminal domain 481 556 2.3E-14 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AVL55_16665 86cc372e3a401c4d6d24def8b8fd4853 579 SUPERFAMILY SSF56801 27 568 1.44E-153 T 11-10-2018 AVL55_17830 9f63f7812b79519be2577037c992b8c8 174 Gene3D G3DSA:3.60.20.10 1 173 2.0E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_17830 9f63f7812b79519be2577037c992b8c8 174 PIRSF PIRSF039093 1 174 3.1E-86 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AVL55_17830 9f63f7812b79519be2577037c992b8c8 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.396 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AVL55_17830 9f63f7812b79519be2577037c992b8c8 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 171 8.8E-86 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AVL55_17830 9f63f7812b79519be2577037c992b8c8 174 Pfam PF00227 Proteasome subunit 2 169 1.3E-23 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AVL55_17830 9f63f7812b79519be2577037c992b8c8 174 SUPERFAMILY SSF56235 2 172 2.85E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_14790 1cd25324289f0683ad21ff981a7839f8 414 Pfam PF03235 Protein of unknown function DUF262 59 207 6.1E-21 T 11-10-2018 IPR004919 Domain of unknown function DUF262 AVL55_07800 821d4aec706f424ff605091f3b6807b4 166 Gene3D G3DSA:2.70.70.10 10 165 1.7E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_07800 821d4aec706f424ff605091f3b6807b4 166 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 20 141 1.7E-27 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AVL55_07800 821d4aec706f424ff605091f3b6807b4 166 SUPERFAMILY SSF51261 12 163 5.93E-30 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_08725 72c718a160384712b8f25ed43068f854 210 Pfam PF13460 NAD(P)H-binding 8 188 3.9E-42 T 11-10-2018 IPR016040 NAD(P)-binding domain AVL55_08725 72c718a160384712b8f25ed43068f854 210 SUPERFAMILY SSF51735 2 192 9.27E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_08725 72c718a160384712b8f25ed43068f854 210 Gene3D G3DSA:3.40.50.720 1 210 1.8E-51 T 11-10-2018 AVL55_13915 b5e6cd0deed24bd52055ea94b832b103 190 Pfam PF06693 Protein of unknown function (DUF1190) 26 180 4.1E-47 T 11-10-2018 IPR009576 Biofilm formation YgiB AVL55_04070 d571168384210adfcde4a14f1ec51958 178 SUPERFAMILY SSF52833 9 175 1.5E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_04070 d571168384210adfcde4a14f1ec51958 178 Gene3D G3DSA:3.40.30.10 1 162 1.9E-20 T 11-10-2018 AVL55_04070 d571168384210adfcde4a14f1ec51958 178 Pfam PF00578 AhpC/TSA family 11 138 5.3E-18 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AVL55_10060 e7234888c0a3fadd834136d7999ce9a5 151 SUPERFAMILY SSF55781 2 146 1.57E-42 T 11-10-2018 AVL55_10060 e7234888c0a3fadd834136d7999ce9a5 151 Pfam PF13185 GAF domain 31 145 2.2E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 AVL55_10060 e7234888c0a3fadd834136d7999ce9a5 151 Gene3D G3DSA:3.30.450.40 1 151 1.6E-65 T 11-10-2018 IPR029016 GAF-like domain superfamily AVL55_10060 e7234888c0a3fadd834136d7999ce9a5 151 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 SUPERFAMILY SSF52922 534 663 3.27E-44 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 SUPERFAMILY SSF52518 335 526 1.11E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 Gene3D G3DSA:3.40.50.970 3 326 2.5E-131 T 11-10-2018 AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 SMART SM00861 355 526 1.9E-62 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 Pfam PF02780 Transketolase, C-terminal domain 541 656 1.4E-15 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 660 8.0E-303 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 Gene3D G3DSA:3.40.50.920 539 662 9.0E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 SUPERFAMILY SSF52518 5 330 7.23E-120 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 Gene3D G3DSA:3.40.50.970 327 538 6.9E-79 T 11-10-2018 AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 6.8E-165 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AVL55_03920 418f0ceff4ecdf8ad8339e09d3741811 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 525 4.1E-42 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AVL55_04005 d3efdf5da4f6c6c9b1d3d5b7bf0f10a9 725 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 443 719 2.4E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_04005 d3efdf5da4f6c6c9b1d3d5b7bf0f10a9 725 SUPERFAMILY SSF161098 413 520 9.29E-10 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_04005 d3efdf5da4f6c6c9b1d3d5b7bf0f10a9 725 Gene3D G3DSA:1.10.3720.10 522 721 5.5E-24 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_04005 d3efdf5da4f6c6c9b1d3d5b7bf0f10a9 725 SUPERFAMILY SSF161098 532 710 3.4E-21 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_14800 94fa6caa65169102d3a289882270a052 294 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 199 289 2.1E-9 T 11-10-2018 IPR009241 Toxin HigB-like AVL55_08005 5cb442d9a69d3528fd019f96c96495c4 378 Pfam PF06516 Purine nucleoside permease (NUP) 48 371 2.4E-107 T 11-10-2018 IPR009486 Purine nucleoside permease GO:0055085 AVL55_08005 5cb442d9a69d3528fd019f96c96495c4 378 PIRSF PIRSF013171 8 378 1.9E-90 T 11-10-2018 IPR009486 Purine nucleoside permease GO:0055085 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 SUPERFAMILY SSF49503 105 305 4.81E-51 T 11-10-2018 IPR008972 Cupredoxin AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 181 229 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 113 233 3.6E-36 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 PRINTS PR01166 Cytochrome c oxidase subunit II signature 218 235 1.4E-37 T 11-10-2018 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 PRINTS PR01166 Cytochrome c oxidase subunit II signature 87 107 1.4E-37 T 11-10-2018 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 PRINTS PR01166 Cytochrome c oxidase subunit II signature 156 177 1.4E-37 T 11-10-2018 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 PRINTS PR01166 Cytochrome c oxidase subunit II signature 75 87 1.4E-37 T 11-10-2018 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 PRINTS PR01166 Cytochrome c oxidase subunit II signature 200 217 1.4E-37 T 11-10-2018 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 PRINTS PR01166 Cytochrome c oxidase subunit II signature 109 128 1.4E-37 T 11-10-2018 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 PRINTS PR01166 Cytochrome c oxidase subunit II signature 180 200 1.4E-37 T 11-10-2018 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 272 346 1.4E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 Gene3D G3DSA:1.10.287.90 37 108 1.8E-78 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 Gene3D G3DSA:1.10.760.10 253 371 1.3E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 Gene3D G3DSA:2.60.40.420 109 245 1.8E-78 T 11-10-2018 IPR008972 Cupredoxin AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 18 98 4.1E-12 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 SUPERFAMILY SSF81464 17 107 6.54E-26 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 27 245 3.3E-55 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_19615 fe7e379b16469c704fc0c7b45c0879c0 371 SUPERFAMILY SSF46626 268 361 5.65E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 SUPERFAMILY SSF52335 6 197 5.89E-72 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 Gene3D G3DSA:3.40.140.20 395 532 8.7E-62 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 532 45.933 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 Gene3D G3DSA:3.40.50.1380 1 200 2.6E-85 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 PIRSF PIRSF000414 1 532 1.5E-228 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 463 6.9E-122 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 SMART SM00851 19 132 1.7E-58 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 SUPERFAMILY SSF53927 223 532 2.01E-134 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 SMART SM00798 137 464 4.1E-222 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 Gene3D G3DSA:3.40.140.20 220 372 6.8E-59 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 532 1.2E-253 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AVL55_19255 64f48637ead5ed91e33a589bcfbd9578 532 Pfam PF02142 MGS-like domain 19 132 6.6E-29 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AVL55_06020 d632e101d6ef4ffbbedc1e4f4c7eac99 139 PIRSF PIRSF002070 1 138 8.1E-22 T 11-10-2018 AVL55_06020 d632e101d6ef4ffbbedc1e4f4c7eac99 139 SUPERFAMILY SSF50249 1 129 2.74E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_06020 d632e101d6ef4ffbbedc1e4f4c7eac99 139 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 120 2.7E-25 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AVL55_06020 d632e101d6ef4ffbbedc1e4f4c7eac99 139 Hamap MF_00984 Single-stranded DNA-binding protein. 2 113 22.522 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AVL55_06020 d632e101d6ef4ffbbedc1e4f4c7eac99 139 Pfam PF00436 Single-strand binding protein family 3 107 2.7E-20 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AVL55_06020 d632e101d6ef4ffbbedc1e4f4c7eac99 139 Gene3D G3DSA:2.40.50.140 1 127 1.7E-31 T 11-10-2018 AVL55_15630 d146a5e3768c5d24e28413e90c50b80c 332 Gene3D G3DSA:1.10.10.60 224 329 3.5E-22 T 11-10-2018 AVL55_15630 d146a5e3768c5d24e28413e90c50b80c 332 Pfam PF12833 Helix-turn-helix domain 252 327 4.2E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_15630 d146a5e3768c5d24e28413e90c50b80c 332 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 186 3.7E-22 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AVL55_15630 d146a5e3768c5d24e28413e90c50b80c 332 SMART SM00342 246 326 1.7E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AVL55_15630 d146a5e3768c5d24e28413e90c50b80c 332 SUPERFAMILY SSF46689 291 329 3.33E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_07440 579ebab7460c3310e42ee8dd3de8ea2a 227 SUPERFAMILY SSF81342 2 189 3.38E-38 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AVL55_07440 579ebab7460c3310e42ee8dd3de8ea2a 227 Pfam PF01292 Prokaryotic cytochrome b561 7 181 1.8E-27 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AVL55_07440 579ebab7460c3310e42ee8dd3de8ea2a 227 Gene3D G3DSA:1.20.950.20 1 170 5.1E-19 T 11-10-2018 AVL55_05510 bec49c598f7056ff16928d904bd5b70d 696 Gene3D G3DSA:2.40.170.20 44 696 2.5E-103 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_05510 bec49c598f7056ff16928d904bd5b70d 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 156 2.3E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_05510 bec49c598f7056ff16928d904bd5b70d 696 SUPERFAMILY SSF56935 33 696 4.89E-81 T 11-10-2018 AVL55_05510 bec49c598f7056ff16928d904bd5b70d 696 Pfam PF00593 TonB dependent receptor 237 694 1.4E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_05510 bec49c598f7056ff16928d904bd5b70d 696 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 679 696 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AVL55_18105 4e205bec04782f11b41d6ee79e43d21c 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 133 4.2E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AVL55_05460 3af5f942590bf37e86da2322d7eb2e22 938 Pfam PF00593 TonB dependent receptor 500 935 3.2E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_05460 3af5f942590bf37e86da2322d7eb2e22 938 SUPERFAMILY SSF56935 34 938 9.42E-100 T 11-10-2018 AVL55_05460 3af5f942590bf37e86da2322d7eb2e22 938 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 171 5.8E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_05460 3af5f942590bf37e86da2322d7eb2e22 938 Gene3D G3DSA:2.170.130.10 36 176 4.0E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_12865 4b3878c7b9fadf880cc169bba11c0c5b 175 SUPERFAMILY SSF158442 18 165 3.53E-42 T 11-10-2018 IPR023380 DsbB-like superfamily AVL55_12865 4b3878c7b9fadf880cc169bba11c0c5b 175 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 10 171 20.139 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB AVL55_12865 4b3878c7b9fadf880cc169bba11c0c5b 175 Gene3D G3DSA:1.20.1550.10 4 174 3.5E-51 T 11-10-2018 IPR023380 DsbB-like superfamily AVL55_12865 4b3878c7b9fadf880cc169bba11c0c5b 175 Pfam PF02600 Disulfide bond formation protein DsbB 15 163 4.0E-42 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AVL55_18145 15ab810a15595eaf9613268d34f3d9a6 321 Pfam PF07859 alpha/beta hydrolase fold 97 295 5.0E-34 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AVL55_18145 15ab810a15595eaf9613268d34f3d9a6 321 SUPERFAMILY SSF53474 94 320 4.13E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_18145 15ab810a15595eaf9613268d34f3d9a6 321 Gene3D G3DSA:3.40.50.1820 6 318 2.9E-73 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_18675 9726e3b2d76217ff48198ac539394dcd 443 Pfam PF02687 FtsX-like permease family 342 428 5.8E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AVL55_18675 9726e3b2d76217ff48198ac539394dcd 443 Pfam PF12704 MacB-like periplasmic core domain 18 205 2.4E-12 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AVL55_07080 f3a70633e7534d7c8263fd04891d1692 447 SUPERFAMILY SSF51569 3 445 8.06E-201 T 11-10-2018 AVL55_07080 f3a70633e7534d7c8263fd04891d1692 447 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 446 2.5E-215 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AVL55_07080 f3a70633e7534d7c8263fd04891d1692 447 Gene3D G3DSA:3.20.20.70 37 179 1.7E-49 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07080 f3a70633e7534d7c8263fd04891d1692 447 Gene3D G3DSA:3.20.20.70 180 446 3.1E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_07080 f3a70633e7534d7c8263fd04891d1692 447 Pfam PF01474 Class-II DAHP synthetase family 4 441 6.0E-206 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AVL55_15140 d6fb9d72bc3c3342de0c0b470a7120f7 179 SMART SM00644 12 163 4.5E-48 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AVL55_15140 d6fb9d72bc3c3342de0c0b470a7120f7 179 SUPERFAMILY SSF55846 4 177 1.44E-61 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AVL55_15140 d6fb9d72bc3c3342de0c0b470a7120f7 179 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 163 1.0E-22 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AVL55_15140 d6fb9d72bc3c3342de0c0b470a7120f7 179 Gene3D G3DSA:3.40.80.10 2 177 7.5E-54 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AVL55_18885 c616c2be44666c877dd5f8f4beb8f22d 358 SMART SM00267 176 352 1.2E-48 T 11-10-2018 IPR000160 GGDEF domain AVL55_18885 c616c2be44666c877dd5f8f4beb8f22d 358 SUPERFAMILY SSF55073 192 351 4.71E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_18885 c616c2be44666c877dd5f8f4beb8f22d 358 Pfam PF00990 Diguanylate cyclase, GGDEF domain 188 347 7.9E-42 T 11-10-2018 IPR000160 GGDEF domain AVL55_18885 c616c2be44666c877dd5f8f4beb8f22d 358 Gene3D G3DSA:3.30.70.270 172 351 7.8E-49 T 11-10-2018 AVL55_18885 c616c2be44666c877dd5f8f4beb8f22d 358 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 351 2.0E-40 T 11-10-2018 IPR000160 GGDEF domain AVL55_08210 927c0a7b46a56148a4c043fdd4899676 327 SUPERFAMILY SSF53448 5 207 2.25E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_08210 927c0a7b46a56148a4c043fdd4899676 327 Pfam PF00535 Glycosyl transferase family 2 7 167 2.0E-22 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_08210 927c0a7b46a56148a4c043fdd4899676 327 Gene3D G3DSA:3.90.550.10 1 250 6.2E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_00020 78f83375e13f682b05f43aebce60e297 806 SMART SM00433 37 799 2.3E-275 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 SUPERFAMILY SSF54211 222 394 7.21E-61 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Gene3D G3DSA:3.40.50.670 705 805 3.3E-26 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 174 1.9E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_00020 78f83375e13f682b05f43aebce60e297 806 SUPERFAMILY SSF55874 6 219 1.96E-74 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Gene3D G3DSA:3.10.20.690 594 685 3.4E-20 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 SUPERFAMILY SSF56719 396 796 2.25E-87 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 SMART SM00387 33 177 2.3E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Gene3D G3DSA:3.30.230.10 222 394 8.7E-75 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR00418 DNA topoisomerase II family signature 489 505 7.9E-71 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR00418 DNA topoisomerase II family signature 115 129 7.9E-71 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR00418 DNA topoisomerase II family signature 270 283 7.9E-71 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR00418 DNA topoisomerase II family signature 738 754 7.9E-71 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR00418 DNA topoisomerase II family signature 422 436 7.9E-71 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR00418 DNA topoisomerase II family signature 37 52 7.9E-71 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR00418 DNA topoisomerase II family signature 507 524 7.9E-71 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR00418 DNA topoisomerase II family signature 72 85 7.9E-71 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR00418 DNA topoisomerase II family signature 527 539 7.9E-71 T 11-10-2018 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 806 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Gene3D G3DSA:3.40.50.670 400 581 9.4E-75 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 806 107.742 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Pfam PF01751 Toprim domain 421 533 6.7E-19 T 11-10-2018 IPR006171 TOPRIM domain AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Pfam PF00204 DNA gyrase B 222 392 7.0E-61 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 759 771 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 244 262 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 314 330 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 362 376 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 197 210 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 182 197 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 7 17 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 472 481 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 775 791 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 221 243 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 PRINTS PR01159 DNA gyrase subunit B signature 376 396 4.9E-86 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 795 1.6E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AVL55_00020 78f83375e13f682b05f43aebce60e297 806 Gene3D G3DSA:3.30.565.10 3 221 4.2E-94 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16775 b1b26579fa4b64709bf877fad5bf8642 67 Pfam PF04024 PspC domain 8 65 6.5E-17 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AVL55_17810 dab6b7c99027908a59d59fa630b29fd5 333 Gene3D G3DSA:3.30.470.20 229 332 2.9E-15 T 11-10-2018 AVL55_17810 dab6b7c99027908a59d59fa630b29fd5 333 Pfam PF08443 RimK-like ATP-grasp domain 205 328 7.9E-9 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AVL55_17810 dab6b7c99027908a59d59fa630b29fd5 333 SUPERFAMILY SSF56059 142 331 7.95E-17 T 11-10-2018 AVL55_00700 8133b1feb09f180b3602ec81aab5a57c 105 Gene3D G3DSA:1.10.3730.20 1 105 1.7E-27 T 11-10-2018 AVL55_00700 8133b1feb09f180b3602ec81aab5a57c 105 SUPERFAMILY SSF103481 4 103 2.35E-17 T 11-10-2018 AVL55_00700 8133b1feb09f180b3602ec81aab5a57c 105 Pfam PF00893 Small Multidrug Resistance protein 2 94 5.4E-24 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AVL55_17130 8013c656ae7083762a1ede20679d24c7 403 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 2.3E-73 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AVL55_17130 8013c656ae7083762a1ede20679d24c7 403 Pfam PF07670 Nucleoside recognition 89 185 4.5E-8 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AVL55_17130 8013c656ae7083762a1ede20679d24c7 403 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 77 3.2E-21 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AVL55_17130 8013c656ae7083762a1ede20679d24c7 403 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 399 1.9E-147 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AVL55_18760 e045415bb2569709745c4e56fc40b58d 308 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 11 305 32.386 T 11-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AVL55_18760 e045415bb2569709745c4e56fc40b58d 308 Pfam PF02649 Type I GTP cyclohydrolase folE2 11 300 9.6E-68 T 11-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AVL55_05485 26a3bc7462d4e1813177078da22bf633 132 Gene3D G3DSA:3.30.420.270 60 128 1.8E-11 T 11-10-2018 AVL55_05485 26a3bc7462d4e1813177078da22bf633 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 130 1.0E-30 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AVL55_11570 c8845f40525dc1804186e4252814e103 377 Gene3D G3DSA:2.40.420.20 305 372 1.0E-69 T 11-10-2018 AVL55_11570 c8845f40525dc1804186e4252814e103 377 Gene3D G3DSA:2.40.30.170 78 304 1.0E-69 T 11-10-2018 AVL55_11570 c8845f40525dc1804186e4252814e103 377 Gene3D G3DSA:2.40.50.100 91 221 1.0E-69 T 11-10-2018 AVL55_11570 c8845f40525dc1804186e4252814e103 377 Gene3D G3DSA:1.10.287.470 126 185 1.0E-69 T 11-10-2018 AVL55_11570 c8845f40525dc1804186e4252814e103 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 89 293 8.6E-26 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AVL55_11570 c8845f40525dc1804186e4252814e103 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 67 374 4.0E-68 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AVL55_11570 c8845f40525dc1804186e4252814e103 377 SUPERFAMILY SSF111369 80 300 2.62E-37 T 11-10-2018 AVL55_05495 e3c861a371cfe4c52ace8ef47a1e7e7c 420 Gene3D G3DSA:1.25.40.10 79 258 4.5E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_05495 e3c861a371cfe4c52ace8ef47a1e7e7c 420 Gene3D G3DSA:1.25.40.10 259 397 1.1E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_05495 e3c861a371cfe4c52ace8ef47a1e7e7c 420 SMART SM00028 332 364 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_05495 e3c861a371cfe4c52ace8ef47a1e7e7c 420 SMART SM00028 158 191 1.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_05495 e3c861a371cfe4c52ace8ef47a1e7e7c 420 SMART SM00028 298 331 1.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_05495 e3c861a371cfe4c52ace8ef47a1e7e7c 420 SMART SM00028 123 156 340.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_05495 e3c861a371cfe4c52ace8ef47a1e7e7c 420 SUPERFAMILY SSF48452 131 392 5.31E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_05495 e3c861a371cfe4c52ace8ef47a1e7e7c 420 Pfam PF13432 Tetratricopeptide repeat 304 364 2.5E-4 T 11-10-2018 AVL55_12425 aab7fefbac96173135c62c50ed569e9d 368 SUPERFAMILY SSF52540 98 340 4.26E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_12425 aab7fefbac96173135c62c50ed569e9d 368 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 AVL55_12425 aab7fefbac96173135c62c50ed569e9d 368 Hamap MF_02040 Iron-sulfur cluster carrier protein. 91 340 36.263 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AVL55_12425 aab7fefbac96173135c62c50ed569e9d 368 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 95 339 1.4E-98 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AVL55_12425 aab7fefbac96173135c62c50ed569e9d 368 Gene3D G3DSA:3.40.50.300 88 337 3.1E-81 T 11-10-2018 AVL55_19170 dabb44428abb93c8c655d52a763b8059 269 Pfam PF01551 Peptidase family M23 149 246 3.7E-23 T 11-10-2018 IPR016047 Peptidase M23 AVL55_19170 dabb44428abb93c8c655d52a763b8059 269 Gene3D G3DSA:2.70.70.10 124 264 7.9E-40 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_19170 dabb44428abb93c8c655d52a763b8059 269 SUPERFAMILY SSF51261 116 248 1.31E-30 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_02360 9809df71a91b250e185c80b3566e784b 128 SUPERFAMILY SSF54593 2 127 3.76E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_02360 9809df71a91b250e185c80b3566e784b 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 123 3.9E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AVL55_02360 9809df71a91b250e185c80b3566e784b 128 Gene3D G3DSA:3.10.180.10 2 128 6.0E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_16780 5c81b1419885a9201b9bce9c72e8b7a1 222 Pfam PF04012 PspA/IM30 family 2 221 4.5E-42 T 11-10-2018 IPR007157 PspA/IM30 AVL55_16780 5c81b1419885a9201b9bce9c72e8b7a1 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 220 2.4E-79 T 11-10-2018 IPR014319 Phage shock protein, PspA AVL55_05515 2c4a3be8fd5c32d0202c891ddaafffdc 87 Pfam PF07615 YKOF-related Family 5 68 2.2E-5 T 11-10-2018 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative AVL55_05515 2c4a3be8fd5c32d0202c891ddaafffdc 87 Gene3D G3DSA:3.30.70.930 1 77 2.9E-13 T 11-10-2018 IPR029756 MTH1187/YkoF-like AVL55_05515 2c4a3be8fd5c32d0202c891ddaafffdc 87 SUPERFAMILY SSF89957 1 81 8.16E-19 T 11-10-2018 IPR029756 MTH1187/YkoF-like AVL55_13610 7019c6894662e461391380ee4a5d8269 265 Pfam PF00149 Calcineurin-like phosphoesterase 7 207 2.7E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AVL55_13610 7019c6894662e461391380ee4a5d8269 265 SUPERFAMILY SSF56300 5 229 1.82E-29 T 11-10-2018 AVL55_13610 7019c6894662e461391380ee4a5d8269 265 Gene3D G3DSA:3.60.21.10 6 240 1.2E-20 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AVL55_13615 a1f0ad69aca559b9a7a53b91ef651d1e 572 Pfam PF13444 Acetyltransferase (GNAT) domain 324 424 1.4E-22 T 11-10-2018 AVL55_13615 a1f0ad69aca559b9a7a53b91ef651d1e 572 SUPERFAMILY SSF55729 306 462 4.5E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_13615 a1f0ad69aca559b9a7a53b91ef651d1e 572 Pfam PF01553 Acyltransferase 70 195 1.1E-11 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_13615 a1f0ad69aca559b9a7a53b91ef651d1e 572 SMART SM00563 81 198 4.8E-8 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_13615 a1f0ad69aca559b9a7a53b91ef651d1e 572 SUPERFAMILY SSF69593 31 263 8.37E-15 T 11-10-2018 AVL55_01190 0bc314ecef78507eb4c604b0f7db05ae 245 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 22 196 3.6E-13 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AVL55_06465 55e6bbc7bea9c8b7b64c3acf01e170f6 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 215 50.188 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AVL55_06465 55e6bbc7bea9c8b7b64c3acf01e170f6 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 202 1.3E-64 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AVL55_06465 55e6bbc7bea9c8b7b64c3acf01e170f6 218 Pfam PF06508 Queuosine biosynthesis protein QueC 5 209 6.5E-68 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AVL55_06465 55e6bbc7bea9c8b7b64c3acf01e170f6 218 SUPERFAMILY SSF52402 3 217 8.6E-63 T 11-10-2018 AVL55_06465 55e6bbc7bea9c8b7b64c3acf01e170f6 218 PIRSF PIRSF006293 1 218 2.4E-77 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AVL55_06465 55e6bbc7bea9c8b7b64c3acf01e170f6 218 Gene3D G3DSA:3.40.50.620 2 215 3.9E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_01425 89fdf80790d51356667c00430a9ce0a2 441 PIRSF PIRSF006060 1 441 1.0E-62 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AVL55_01425 89fdf80790d51356667c00430a9ce0a2 441 Pfam PF13520 Amino acid permease 13 398 2.7E-29 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AVL55_01425 89fdf80790d51356667c00430a9ce0a2 441 Gene3D G3DSA:1.20.1740.10 7 435 1.4E-79 T 11-10-2018 AVL55_18375 20023a2fdfc50898d192b173c63395b8 354 SUPERFAMILY SSF55909 3 332 9.64E-96 T 11-10-2018 AVL55_18375 20023a2fdfc50898d192b173c63395b8 354 Gene3D G3DSA:3.75.10.10 3 341 8.4E-96 T 11-10-2018 AVL55_18375 20023a2fdfc50898d192b173c63395b8 354 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 7 332 5.5E-92 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AVL55_13980 538cd8edef792e5d4846c73416f25424 294 Pfam PF01734 Patatin-like phospholipase 24 181 1.3E-24 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AVL55_13980 538cd8edef792e5d4846c73416f25424 294 Gene3D G3DSA:3.40.1090.10 114 284 1.4E-17 T 11-10-2018 AVL55_13980 538cd8edef792e5d4846c73416f25424 294 Gene3D G3DSA:3.40.1090.10 5 113 8.0E-22 T 11-10-2018 AVL55_13980 538cd8edef792e5d4846c73416f25424 294 SUPERFAMILY SSF52151 23 283 4.71E-38 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AVL55_09755 393ba6be4226b2f23de99de0ee2f4276 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 22 362 7.9E-116 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AVL55_09755 393ba6be4226b2f23de99de0ee2f4276 376 SUPERFAMILY SSF52096 19 360 4.06E-61 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_09755 393ba6be4226b2f23de99de0ee2f4276 376 Gene3D G3DSA:3.90.226.10 7 376 6.6E-128 T 11-10-2018 AVL55_07470 be8fae430006503446010b23d81836fd 179 Pfam PF00293 NUDIX domain 44 156 2.9E-7 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AVL55_07470 be8fae430006503446010b23d81836fd 179 SUPERFAMILY SSF55811 4 176 6.36E-38 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_07470 be8fae430006503446010b23d81836fd 179 Gene3D G3DSA:3.90.79.10 2 176 4.0E-41 T 11-10-2018 AVL55_07365 5f6ffa67e8333a01b7e6fd92ffa9f1f1 386 SUPERFAMILY SSF56796 6 384 6.8E-120 T 11-10-2018 AVL55_07365 5f6ffa67e8333a01b7e6fd92ffa9f1f1 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AVL55_07365 5f6ffa67e8333a01b7e6fd92ffa9f1f1 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 377 1.1E-114 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AVL55_07365 5f6ffa67e8333a01b7e6fd92ffa9f1f1 386 Gene3D G3DSA:3.40.50.1970 1 183 9.9E-52 T 11-10-2018 AVL55_07365 5f6ffa67e8333a01b7e6fd92ffa9f1f1 386 Gene3D G3DSA:1.20.1090.10 184 386 3.4E-64 T 11-10-2018 AVL55_12680 24478cbf88cbf179661396f2d07e43a3 145 Pfam PF00583 Acetyltransferase (GNAT) family 33 127 8.4E-11 T 11-10-2018 IPR000182 GNAT domain AVL55_12680 24478cbf88cbf179661396f2d07e43a3 145 Gene3D G3DSA:3.40.630.30 43 143 1.7E-21 T 11-10-2018 AVL55_12680 24478cbf88cbf179661396f2d07e43a3 145 SUPERFAMILY SSF55729 1 135 1.18E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_07525 6ef61c0ef5d3fb7bb27266ab422af207 399 SUPERFAMILY SSF51905 2 388 5.18E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_07525 6ef61c0ef5d3fb7bb27266ab422af207 399 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 397 2.6E-104 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AVL55_07525 6ef61c0ef5d3fb7bb27266ab422af207 399 Gene3D G3DSA:3.50.50.60 1 198 3.0E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_07525 6ef61c0ef5d3fb7bb27266ab422af207 399 Gene3D G3DSA:3.50.50.60 261 399 7.4E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_07525 6ef61c0ef5d3fb7bb27266ab422af207 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 4.7E-16 T 11-10-2018 AVL55_07525 6ef61c0ef5d3fb7bb27266ab422af207 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 4.7E-16 T 11-10-2018 AVL55_07525 6ef61c0ef5d3fb7bb27266ab422af207 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 4.7E-16 T 11-10-2018 AVL55_07525 6ef61c0ef5d3fb7bb27266ab422af207 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 4.7E-16 T 11-10-2018 AVL55_07525 6ef61c0ef5d3fb7bb27266ab422af207 399 Pfam PF01494 FAD binding domain 3 308 7.3E-27 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AVL55_19090 80cbe23c53a51ea6db8240189ecfd01a 93 Gene3D G3DSA:3.10.50.40 2 92 8.1E-37 T 11-10-2018 AVL55_19090 80cbe23c53a51ea6db8240189ecfd01a 93 SUPERFAMILY SSF54534 5 87 3.73E-28 T 11-10-2018 AVL55_19090 80cbe23c53a51ea6db8240189ecfd01a 93 Pfam PF13616 PPIC-type PPIASE domain 13 89 3.4E-22 T 11-10-2018 AVL55_19090 80cbe23c53a51ea6db8240189ecfd01a 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AVL55_07265 e7f19276a86fe630f6e9a86f8f9afbab 393 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 387 2.6E-188 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AVL55_07265 e7f19276a86fe630f6e9a86f8f9afbab 393 Gene3D G3DSA:3.40.50.1100 53 382 6.1E-180 T 11-10-2018 AVL55_07265 e7f19276a86fe630f6e9a86f8f9afbab 393 SUPERFAMILY SSF53686 6 387 2.23E-140 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AVL55_07265 e7f19276a86fe630f6e9a86f8f9afbab 393 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AVL55_07265 e7f19276a86fe630f6e9a86f8f9afbab 393 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 376 1.4E-48 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AVL55_07265 e7f19276a86fe630f6e9a86f8f9afbab 393 PIRSF PIRSF001413 1 393 2.9E-160 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AVL55_07265 e7f19276a86fe630f6e9a86f8f9afbab 393 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 389 49.921 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AVL55_07265 e7f19276a86fe630f6e9a86f8f9afbab 393 Gene3D G3DSA:3.40.50.1100 9 204 6.1E-180 T 11-10-2018 AVL55_05180 7b5dd1bc5acd779e99b8d06bd71a6390 245 Pfam PF01311 Bacterial export proteins, family 1 1 230 2.8E-63 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AVL55_05180 7b5dd1bc5acd779e99b8d06bd71a6390 245 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 1 241 1.4E-67 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AVL55_05180 7b5dd1bc5acd779e99b8d06bd71a6390 245 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 166 188 2.4E-17 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AVL55_05180 7b5dd1bc5acd779e99b8d06bd71a6390 245 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 66 85 2.4E-17 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AVL55_05180 7b5dd1bc5acd779e99b8d06bd71a6390 245 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 188 207 2.4E-17 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AVL55_05180 7b5dd1bc5acd779e99b8d06bd71a6390 245 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 7 28 2.4E-17 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AVL55_16885 6d5b452179542427e205883c628b1bbe 620 SUPERFAMILY SSF56300 133 513 6.35E-8 T 11-10-2018 AVL55_19710 195b456edfb304676867327ffa1909d5 145 Pfam PF13279 Thioesterase-like superfamily 20 134 1.4E-12 T 11-10-2018 AVL55_19710 195b456edfb304676867327ffa1909d5 145 SUPERFAMILY SSF54637 7 141 8.52E-37 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_19710 195b456edfb304676867327ffa1909d5 145 Gene3D G3DSA:3.10.129.10 2 142 6.2E-43 T 11-10-2018 AVL55_17625 4ed452ed24194561caabdf22fc171557 83 Pfam PF06146 Phosphate-starvation-inducible E 10 69 5.9E-12 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like AVL55_17625 4ed452ed24194561caabdf22fc171557 83 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 3 74 3.1E-29 T 11-10-2018 IPR013468 Conserved hypothetical protein CHP02647 AVL55_14305 f4c41780f11d7496bd41dfad9e85ae8e 567 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 43 530 2.2E-71 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 AVL55_03320 115817dad40e8c7f29b60e3a498ce5a9 124 SUPERFAMILY SSF110069 5 124 5.76E-46 T 11-10-2018 IPR036767 ApaG domain superfamily AVL55_03320 115817dad40e8c7f29b60e3a498ce5a9 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 28.714 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG AVL55_03320 115817dad40e8c7f29b60e3a498ce5a9 124 Pfam PF04379 ApaG domain 21 101 2.3E-33 T 11-10-2018 IPR007474 ApaG domain AVL55_03320 115817dad40e8c7f29b60e3a498ce5a9 124 Gene3D G3DSA:2.60.40.1470 1 124 1.6E-45 T 11-10-2018 IPR036767 ApaG domain superfamily AVL55_01505 04ce06979a990ff05167689759c2a78d 561 SUPERFAMILY SSF51905 1 557 1.68E-66 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_01505 04ce06979a990ff05167689759c2a78d 561 SUPERFAMILY SSF54373 350 497 5.89E-54 T 11-10-2018 AVL55_01505 04ce06979a990ff05167689759c2a78d 561 Gene3D G3DSA:3.50.50.60 237 341 3.1E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_01505 04ce06979a990ff05167689759c2a78d 561 Gene3D G3DSA:3.50.50.60 456 556 9.5E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_01505 04ce06979a990ff05167689759c2a78d 561 Pfam PF00732 GMC oxidoreductase 71 312 7.2E-15 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AVL55_01505 04ce06979a990ff05167689759c2a78d 561 Gene3D G3DSA:3.50.50.60 1 170 9.6E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_01505 04ce06979a990ff05167689759c2a78d 561 Pfam PF05199 GMC oxidoreductase 425 548 2.7E-20 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 Pfam PF01019 Gamma-glutamyltranspeptidase 56 558 2.7E-165 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 Gene3D G3DSA:3.60.20.40 373 563 7.2E-69 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 SUPERFAMILY SSF56235 28 563 2.78E-184 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 41 552 2.1E-126 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 298 1.3E-47 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 250 266 1.3E-47 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 428 443 1.3E-47 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 452 469 1.3E-47 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 373 391 1.3E-47 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 1.3E-47 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 397 415 1.3E-47 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 134 152 1.3E-47 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 152 171 1.3E-47 T 11-10-2018 AVL55_01785 15ad1217ae6b3e0611ae4e3ffc51ab0a 563 Gene3D G3DSA:1.10.246.130 266 372 5.8E-37 T 11-10-2018 AVL55_10030 2ffc3f2a3fee7289fc109ffc5b18d785 292 Gene3D G3DSA:3.40.50.150 1 292 1.3E-94 T 11-10-2018 AVL55_10030 2ffc3f2a3fee7289fc109ffc5b18d785 292 SUPERFAMILY SSF53335 9 282 7.92E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_10030 2ffc3f2a3fee7289fc109ffc5b18d785 292 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 280 2.6E-57 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AVL55_10030 2ffc3f2a3fee7289fc109ffc5b18d785 292 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 274 38.037 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AVL55_11650 0f1a4427233f73f9e83675b35968d156 228 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 208 4.2E-19 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AVL55_11650 0f1a4427233f73f9e83675b35968d156 228 SMART SM00855 3 171 1.2E-7 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AVL55_11650 0f1a4427233f73f9e83675b35968d156 228 Gene3D G3DSA:3.40.50.1240 1 221 4.4E-30 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AVL55_11650 0f1a4427233f73f9e83675b35968d156 228 SUPERFAMILY SSF53254 1 217 2.08E-35 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AVL55_09505 c51196cf8d27df9e652183c4601ae609 343 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 26 318 1.8E-77 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AVL55_09505 c51196cf8d27df9e652183c4601ae609 343 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 327 1.9E-97 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AVL55_09505 c51196cf8d27df9e652183c4601ae609 343 SUPERFAMILY SSF52540 55 167 2.54E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09505 c51196cf8d27df9e652183c4601ae609 343 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 331 35.872 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AVL55_04855 b8eb31df53959fb1aa0d32b0e11b9e65 140 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.1E-46 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AVL55_04855 b8eb31df53959fb1aa0d32b0e11b9e65 140 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AVL55_04855 b8eb31df53959fb1aa0d32b0e11b9e65 140 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 136 3.9E-11 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AVL55_04855 b8eb31df53959fb1aa0d32b0e11b9e65 140 Pfam PF00460 Flagella basal body rod protein 7 32 9.6E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AVL55_19665 1f15012fc21836e696cc92de97787d50 415 Pfam PF07690 Major Facilitator Superfamily 32 370 1.0E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_19665 1f15012fc21836e696cc92de97787d50 415 SUPERFAMILY SSF103473 25 404 1.2E-43 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_19665 1f15012fc21836e696cc92de97787d50 415 Gene3D G3DSA:1.20.1720.10 25 405 3.7E-77 T 11-10-2018 AVL55_17320 1251ac6ab535d052198c55d7888acd3e 414 Gene3D G3DSA:3.40.50.2000 1 222 2.3E-20 T 11-10-2018 AVL55_17320 1251ac6ab535d052198c55d7888acd3e 414 Pfam PF00534 Glycosyl transferases group 1 236 391 7.5E-24 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_17320 1251ac6ab535d052198c55d7888acd3e 414 SUPERFAMILY SSF53756 5 391 7.18E-54 T 11-10-2018 AVL55_17320 1251ac6ab535d052198c55d7888acd3e 414 Pfam PF13439 Glycosyltransferase Family 4 19 217 1.2E-19 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AVL55_17320 1251ac6ab535d052198c55d7888acd3e 414 Gene3D G3DSA:3.40.50.2000 223 394 1.6E-28 T 11-10-2018 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 22 233 4.5E-65 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 Gene3D G3DSA:1.10.150.240 33 106 6.5E-68 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 23 206 1.2E-37 T 11-10-2018 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 SUPERFAMILY SSF56784 14 233 1.71E-61 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 18 29 2.8E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 167 2.8E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 120 133 2.8E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 169 189 2.8E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 18 237 32.806 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 123 200 7.2E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 Gene3D G3DSA:3.40.50.1000 22 229 6.5E-68 T 11-10-2018 IPR023214 HAD superfamily AVL55_11360 6673107ae000750618c73e12ab3f7cbd 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 206 3.6E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_11760 75dbfcb3adb0a1d5c25ea05a7a43b016 409 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 251 264 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AVL55_11760 75dbfcb3adb0a1d5c25ea05a7a43b016 409 SUPERFAMILY SSF53383 3 407 3.09E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_11760 75dbfcb3adb0a1d5c25ea05a7a43b016 409 Pfam PF00155 Aminotransferase class I and II 30 401 3.1E-59 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_11760 75dbfcb3adb0a1d5c25ea05a7a43b016 409 Gene3D G3DSA:3.40.640.10 2 408 6.0E-115 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_05215 50ee360fa44da23c0ce067f007d5fba0 251 SUPERFAMILY SSF75708 43 250 5.36E-64 T 11-10-2018 AVL55_05215 50ee360fa44da23c0ce067f007d5fba0 251 Gene3D G3DSA:1.10.287.500 62 196 1.8E-43 T 11-10-2018 AVL55_05215 50ee360fa44da23c0ce067f007d5fba0 251 Pfam PF04344 Chemotaxis phosphatase, CheZ 43 251 4.2E-76 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AVL55_05215 50ee360fa44da23c0ce067f007d5fba0 251 PIRSF PIRSF002884 20 251 4.0E-80 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AVL55_11000 f8108276d7acc0d66f30978af2bc39fb 85 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 84 4.2E-18 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AVL55_11000 f8108276d7acc0d66f30978af2bc39fb 85 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 85 16.745 T 11-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AVL55_15265 baf669a2dc47208a16183afac8062247 591 Pfam PF00905 Penicillin binding protein transpeptidase domain 264 562 2.6E-64 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AVL55_15265 baf669a2dc47208a16183afac8062247 591 Pfam PF03717 Penicillin-binding Protein dimerisation domain 73 222 2.1E-18 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AVL55_15265 baf669a2dc47208a16183afac8062247 591 SUPERFAMILY SSF56601 239 574 7.73E-87 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AVL55_15265 baf669a2dc47208a16183afac8062247 591 Gene3D G3DSA:3.40.710.10 299 485 2.5E-102 T 11-10-2018 AVL55_15265 baf669a2dc47208a16183afac8062247 591 SUPERFAMILY SSF56519 67 237 2.09E-43 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AVL55_15265 baf669a2dc47208a16183afac8062247 591 Gene3D G3DSA:3.30.450.330 239 566 2.5E-102 T 11-10-2018 AVL55_15265 baf669a2dc47208a16183afac8062247 591 Gene3D G3DSA:3.90.1310.30 63 237 1.2E-43 T 11-10-2018 AVL55_15265 baf669a2dc47208a16183afac8062247 591 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 23 578 44.608 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AVL55_10795 d9bc2405a4ee401e06bbd4fff8756930 215 Pfam PF11205 Protein of unknown function (DUF2987) 23 167 3.8E-43 T 11-10-2018 IPR021370 Protein of unknown function DUF2987 AVL55_18975 f34377f0e263863e05e426def6056218 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 320 469 3.2E-25 T 11-10-2018 IPR000160 GGDEF domain AVL55_18975 f34377f0e263863e05e426def6056218 473 SMART SM00267 299 470 2.1E-18 T 11-10-2018 IPR000160 GGDEF domain AVL55_18975 f34377f0e263863e05e426def6056218 473 Gene3D G3DSA:3.30.70.270 318 471 1.4E-29 T 11-10-2018 AVL55_18975 f34377f0e263863e05e426def6056218 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 321 465 3.5E-27 T 11-10-2018 IPR000160 GGDEF domain AVL55_18975 f34377f0e263863e05e426def6056218 473 SUPERFAMILY SSF55073 320 468 4.32E-28 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_00105 5b81cb7502705f5e3b1fca4568f6b598 357 SUPERFAMILY SSF54106 35 83 1.31E-7 T 11-10-2018 AVL55_00105 5b81cb7502705f5e3b1fca4568f6b598 357 Pfam PF01476 LysM domain 37 83 3.9E-12 T 11-10-2018 IPR018392 LysM domain AVL55_00105 5b81cb7502705f5e3b1fca4568f6b598 357 Gene3D G3DSA:3.10.350.10 35 82 1.9E-14 T 11-10-2018 IPR036779 LysM domain superfamily AVL55_00105 5b81cb7502705f5e3b1fca4568f6b598 357 SMART SM00257 36 84 9.1E-6 T 11-10-2018 IPR018392 LysM domain AVL55_16075 3d568ee76d95dab8bd411ecc68db0deb 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 350 1.2E-75 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AVL55_16075 3d568ee76d95dab8bd411ecc68db0deb 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 349 8.5E-122 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AVL55_13285 f29a5e6f90b0b727f1b9c9b33a33af29 421 Gene3D G3DSA:3.50.50.60 1 282 4.9E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_13285 f29a5e6f90b0b727f1b9c9b33a33af29 421 Pfam PF01593 Flavin containing amine oxidoreductase 12 277 1.4E-21 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AVL55_13285 f29a5e6f90b0b727f1b9c9b33a33af29 421 SUPERFAMILY SSF51905 4 414 1.1E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_02290 82219672abcb8e4cf4d4272499df846a 60 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 58 1.5E-22 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 AVL55_15880 24979934997ed4b129f95ecc2335fe55 439 Gene3D G3DSA:2.40.160.180 37 434 5.1E-103 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily AVL55_15880 24979934997ed4b129f95ecc2335fe55 439 Pfam PF04966 Carbohydrate-selective porin, OprB family 64 433 8.4E-77 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 AVL55_19595 5085d1e0792c012f3ef65793b0ac2190 69 Pfam PF11137 Protein of unknown function (DUF2909) 3 62 9.3E-16 T 11-10-2018 IPR021313 Protein of unknown function DUF2909 AVL55_17610 662007caf0e663083b6f04f2ee14db32 93 SUPERFAMILY SSF54593 23 83 5.4E-5 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_17610 662007caf0e663083b6f04f2ee14db32 93 Pfam PF13670 Peptidase propeptide and YPEB domain 8 91 2.5E-25 T 11-10-2018 IPR025711 PepSY domain AVL55_00155 2a7ed6d2673be23fbe99136eec10f22a 346 Gene3D G3DSA:3.40.50.2000 175 301 3.4E-9 T 11-10-2018 AVL55_00155 2a7ed6d2673be23fbe99136eec10f22a 346 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 134 256 3.0E-7 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 AVL55_00155 2a7ed6d2673be23fbe99136eec10f22a 346 SUPERFAMILY SSF53756 9 316 4.93E-30 T 11-10-2018 AVL55_00155 2a7ed6d2673be23fbe99136eec10f22a 346 Gene3D G3DSA:3.40.50.2000 302 312 3.4E-9 T 11-10-2018 AVL55_14245 d333fc9a12f1484e84950cdf408c214a 260 Pfam PF01061 ABC-2 type transporter 8 224 1.1E-34 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AVL55_14245 d333fc9a12f1484e84950cdf408c214a 260 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 3 253 5.3E-123 T 11-10-2018 IPR022403 Alcohol ABC transporter, permease protein AVL55_14245 d333fc9a12f1484e84950cdf408c214a 260 PIRSF PIRSF006648 6 255 1.7E-44 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_14245 d333fc9a12f1484e84950cdf408c214a 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 24 45 1.4E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_14245 d333fc9a12f1484e84950cdf408c214a 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 141 165 1.4E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_14245 d333fc9a12f1484e84950cdf408c214a 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 178 197 1.4E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AVL55_16505 39ef0faefae244ac4661eaec5e8eaef4 151 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 13 148 1.3E-24 T 11-10-2018 IPR018893 Type VIII secretion system, CsgF AVL55_02720 3ac4cdc1f52364de62683a073d766f08 268 Pfam PF01925 Sulfite exporter TauE/SafE 12 263 1.9E-48 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AVL55_07330 12c52b1dcd614c64c86c9c783ee20adb 428 Pfam PF04286 Protein of unknown function (DUF445) 53 425 5.0E-88 T 11-10-2018 IPR007383 Protein of unknown function DUF445 AVL55_08420 c4d5b490de02cfa09293fb13bceca8db 135 Gene3D G3DSA:1.10.1660.10 2 131 5.1E-27 T 11-10-2018 AVL55_08420 c4d5b490de02cfa09293fb13bceca8db 135 Pfam PF09278 MerR, DNA binding 52 117 1.3E-16 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AVL55_08420 c4d5b490de02cfa09293fb13bceca8db 135 SMART SM00422 10 77 3.5E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_08420 c4d5b490de02cfa09293fb13bceca8db 135 SUPERFAMILY SSF46955 10 124 3.66E-26 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_08420 c4d5b490de02cfa09293fb13bceca8db 135 Pfam PF00376 MerR family regulatory protein 12 46 7.9E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_15665 bf994c51703352b2fb75bc8be4f449f9 666 Pfam PF04348 LppC putative lipoprotein 66 360 2.6E-29 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA AVL55_15665 bf994c51703352b2fb75bc8be4f449f9 666 Pfam PF04348 LppC putative lipoprotein 404 650 1.1E-43 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA AVL55_15665 bf994c51703352b2fb75bc8be4f449f9 666 SUPERFAMILY SSF53822 265 663 2.47E-54 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_15665 bf994c51703352b2fb75bc8be4f449f9 666 Gene3D G3DSA:1.25.40.650 164 262 1.2E-5 T 11-10-2018 AVL55_15665 bf994c51703352b2fb75bc8be4f449f9 666 Gene3D G3DSA:3.40.50.2300 473 662 1.1E-24 T 11-10-2018 AVL55_12885 45da7c6e8f85d4785c6baecfab7bae33 360 Pfam PF13406 Transglycosylase SLT domain 63 354 6.1E-102 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 AVL55_12885 45da7c6e8f85d4785c6baecfab7bae33 360 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 63 357 1.6E-108 T 11-10-2018 IPR011970 Lytic murein transglycosylase AVL55_12885 45da7c6e8f85d4785c6baecfab7bae33 360 Gene3D G3DSA:1.10.8.350 73 238 5.9E-84 T 11-10-2018 AVL55_12885 45da7c6e8f85d4785c6baecfab7bae33 360 SUPERFAMILY SSF53955 59 359 3.37E-90 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AVL55_12885 45da7c6e8f85d4785c6baecfab7bae33 360 Gene3D G3DSA:1.10.530.10 105 353 5.9E-84 T 11-10-2018 AVL55_09825 d3862e403902942107342aab712a5e5b 280 PIRSF PIRSF028200 1 280 7.6E-67 T 11-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 AVL55_09010 79f2cfeb8b76aacd0ec949bfbf663a39 143 SUPERFAMILY SSF55961 1 143 4.23E-33 T 11-10-2018 AVL55_09010 79f2cfeb8b76aacd0ec949bfbf663a39 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.4E-31 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AVL55_09010 79f2cfeb8b76aacd0ec949bfbf663a39 143 Gene3D G3DSA:3.30.530.20 3 143 9.7E-38 T 11-10-2018 IPR023393 START-like domain superfamily AVL55_01725 85bdc19663393dcbe4ae206412fab3ef 307 PIRSF PIRSF016660 1 307 5.0E-111 T 11-10-2018 IPR008526 Inner membrane protein YedI AVL55_01725 85bdc19663393dcbe4ae206412fab3ef 307 Pfam PF05661 Protein of unknown function (DUF808) 5 294 4.2E-105 T 11-10-2018 IPR008526 Inner membrane protein YedI AVL55_16920 7a901861670ee801daedb4994a63921c 207 Gene3D G3DSA:3.40.50.720 1 205 1.6E-52 T 11-10-2018 AVL55_16920 7a901861670ee801daedb4994a63921c 207 Pfam PF13460 NAD(P)H-binding 8 126 1.6E-8 T 11-10-2018 IPR016040 NAD(P)-binding domain AVL55_16920 7a901861670ee801daedb4994a63921c 207 SUPERFAMILY SSF51735 1 202 2.14E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_15295 675573061068d2b79148dba1c1528f64 412 Gene3D G3DSA:3.20.20.140 31 412 6.2E-123 T 11-10-2018 AVL55_15295 675573061068d2b79148dba1c1528f64 412 SUPERFAMILY SSF51556 33 404 4.51E-97 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_15295 675573061068d2b79148dba1c1528f64 412 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 40 396 6.8E-97 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AVL55_10050 ff1f7ef85b2e521bb3db6bd4ace0bfab 359 SUPERFAMILY SSF53383 1 359 3.16E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_10050 ff1f7ef85b2e521bb3db6bd4ace0bfab 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 176 196 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AVL55_10050 ff1f7ef85b2e521bb3db6bd4ace0bfab 359 Pfam PF00266 Aminotransferase class-V 20 341 1.1E-35 T 11-10-2018 IPR000192 Aminotransferase class V domain AVL55_10050 ff1f7ef85b2e521bb3db6bd4ace0bfab 359 Gene3D G3DSA:3.90.1150.10 1 356 3.8E-142 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_10050 ff1f7ef85b2e521bb3db6bd4ace0bfab 359 PIRSF PIRSF000524 1 359 5.1E-109 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AVL55_10050 ff1f7ef85b2e521bb3db6bd4ace0bfab 359 Gene3D G3DSA:3.40.640.10 9 257 3.8E-142 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_17030 20d2f2c85bbd9632f9d45f2005f63a51 1194 SUPERFAMILY SSF69318 770 1100 2.09E-13 T 11-10-2018 AVL55_17030 20d2f2c85bbd9632f9d45f2005f63a51 1194 SUPERFAMILY SSF69318 530 762 4.97E-23 T 11-10-2018 AVL55_15540 d0500194cb9e1536f7396bae30f32ddd 292 Pfam PF03466 LysR substrate binding domain 88 288 2.4E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_15540 d0500194cb9e1536f7396bae30f32ddd 292 SUPERFAMILY SSF46785 6 86 4.89E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_15540 d0500194cb9e1536f7396bae30f32ddd 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 62 6.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_15540 d0500194cb9e1536f7396bae30f32ddd 292 Gene3D G3DSA:1.10.10.10 3 91 2.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_15540 d0500194cb9e1536f7396bae30f32ddd 292 Gene3D G3DSA:3.40.190.290 92 289 5.2E-61 T 11-10-2018 AVL55_15540 d0500194cb9e1536f7396bae30f32ddd 292 SUPERFAMILY SSF53850 90 288 3.14E-43 T 11-10-2018 AVL55_08015 8b2bf7a438f70521bab4f9f84c946294 525 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 356 376 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AVL55_08015 8b2bf7a438f70521bab4f9f84c946294 525 Pfam PF00860 Permease family 22 408 6.8E-79 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AVL55_08015 8b2bf7a438f70521bab4f9f84c946294 525 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 437 1.7E-99 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AVL55_19415 da595a8653aba095e8513404941eb07f 187 SUPERFAMILY SSF55811 5 185 8.53E-41 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_19415 da595a8653aba095e8513404941eb07f 187 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AVL55_19415 da595a8653aba095e8513404941eb07f 187 Pfam PF00293 NUDIX domain 50 162 2.0E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AVL55_19415 da595a8653aba095e8513404941eb07f 187 Gene3D G3DSA:3.90.79.10 11 187 3.1E-51 T 11-10-2018 AVL55_00065 410a8c99178198014cf561ca8239a6b6 211 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 1.5E-72 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AVL55_00065 410a8c99178198014cf561ca8239a6b6 211 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 195 27.201 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AVL55_00065 410a8c99178198014cf561ca8239a6b6 211 Gene3D G3DSA:3.40.50.300 2 207 2.7E-55 T 11-10-2018 AVL55_00065 410a8c99178198014cf561ca8239a6b6 211 SUPERFAMILY SSF52540 16 195 3.31E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_00065 410a8c99178198014cf561ca8239a6b6 211 Pfam PF01926 50S ribosome-binding GTPase 26 144 2.3E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_05570 a6ad4e1605665ecd4e99a423ba3bece6 343 Pfam PF11168 Protein of unknown function (DUF2955) 12 151 1.1E-35 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 AVL55_05570 a6ad4e1605665ecd4e99a423ba3bece6 343 PIRSF PIRSF029594 5 342 3.0E-108 T 11-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 AVL55_04095 df360d4329221c833f2c1fa4ed20d1cf 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 8.7E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_04095 df360d4329221c833f2c1fa4ed20d1cf 305 Pfam PF03466 LysR substrate binding domain 92 297 1.8E-32 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_04095 df360d4329221c833f2c1fa4ed20d1cf 305 SUPERFAMILY SSF53850 92 299 2.35E-33 T 11-10-2018 AVL55_04095 df360d4329221c833f2c1fa4ed20d1cf 305 SUPERFAMILY SSF46785 6 112 1.55E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_04095 df360d4329221c833f2c1fa4ed20d1cf 305 Gene3D G3DSA:3.40.190.290 95 298 1.2E-46 T 11-10-2018 AVL55_04095 df360d4329221c833f2c1fa4ed20d1cf 305 Gene3D G3DSA:1.10.10.10 4 89 2.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_16555 71c1c36fdcc58114d848dabe222ead73 824 SUPERFAMILY SSF51735 7 357 4.86E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_16555 71c1c36fdcc58114d848dabe222ead73 824 Pfam PF07884 Vitamin K epoxide reductase family 520 654 7.8E-20 T 11-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 AVL55_16555 71c1c36fdcc58114d848dabe222ead73 824 Gene3D G3DSA:1.20.1440.130 510 662 8.2E-13 T 11-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 AVL55_16555 71c1c36fdcc58114d848dabe222ead73 824 Gene3D G3DSA:3.40.50.720 1 347 6.1E-37 T 11-10-2018 AVL55_16555 71c1c36fdcc58114d848dabe222ead73 824 Pfam PF01370 NAD dependent epimerase/dehydratase family 11 235 1.2E-19 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AVL55_17420 5cd2bd1d7ef74c82441ace0ba7431335 711 SUPERFAMILY SSF69318 86 386 4.1E-7 T 11-10-2018 AVL55_17645 e96ab2726383192a131c7db79eaad2d1 341 SUPERFAMILY SSF53850 59 250 3.5E-13 T 11-10-2018 AVL55_17645 e96ab2726383192a131c7db79eaad2d1 341 Gene3D G3DSA:3.40.190.10 118 214 6.0E-9 T 11-10-2018 AVL55_17645 e96ab2726383192a131c7db79eaad2d1 341 Gene3D G3DSA:3.40.190.10 61 250 6.0E-9 T 11-10-2018 AVL55_17645 e96ab2726383192a131c7db79eaad2d1 341 SMART SM00062 44 260 0.003 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AVL55_07915 5baa27747c71c877e2fbc59533e93de0 91 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 74 4.4E-13 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AVL55_07915 5baa27747c71c877e2fbc59533e93de0 91 SUPERFAMILY SSF54909 1 84 3.4E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_07915 5baa27747c71c877e2fbc59533e93de0 91 Gene3D G3DSA:3.30.70.100 1 88 6.2E-21 T 11-10-2018 AVL55_00235 6bf47ffa6b2b3a32c558652116e97d33 195 Gene3D G3DSA:1.10.357.10 7 194 8.6E-64 T 11-10-2018 AVL55_00235 6bf47ffa6b2b3a32c558652116e97d33 195 SUPERFAMILY SSF46689 5 76 8.48E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_00235 6bf47ffa6b2b3a32c558652116e97d33 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 57 8.3E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_00235 6bf47ffa6b2b3a32c558652116e97d33 195 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 195 41.638 T 11-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AVL55_00720 4fe9b16c2d5886a63d720e813611b4e2 165 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 94 1.1E-6 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AVL55_00720 4fe9b16c2d5886a63d720e813611b4e2 165 Gene3D G3DSA:3.40.50.1820 1 163 7.1E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_00720 4fe9b16c2d5886a63d720e813611b4e2 165 SUPERFAMILY SSF53474 3 162 8.17E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_02765 4d5d7cb79c6ca3e924d4f2ea490fff35 238 SUPERFAMILY SSF55120 10 222 2.88E-61 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_02765 4d5d7cb79c6ca3e924d4f2ea490fff35 238 Gene3D G3DSA:3.30.2350.10 6 223 1.2E-69 T 11-10-2018 AVL55_02765 4d5d7cb79c6ca3e924d4f2ea490fff35 238 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 62 76 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_02765 4d5d7cb79c6ca3e924d4f2ea490fff35 238 Pfam PF00849 RNA pseudouridylate synthase 25 175 1.9E-30 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_06255 49a12e74202d9f3aecda5e4315dc94c1 313 SUPERFAMILY SSF48179 189 311 3.74E-32 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AVL55_06255 49a12e74202d9f3aecda5e4315dc94c1 313 Gene3D G3DSA:1.10.1040.10 189 312 4.3E-38 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AVL55_06255 49a12e74202d9f3aecda5e4315dc94c1 313 Gene3D G3DSA:3.40.50.720 3 187 7.2E-32 T 11-10-2018 AVL55_06255 49a12e74202d9f3aecda5e4315dc94c1 313 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 189 311 1.5E-31 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain AVL55_06255 49a12e74202d9f3aecda5e4315dc94c1 313 SUPERFAMILY SSF51735 3 161 1.72E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_06255 49a12e74202d9f3aecda5e4315dc94c1 313 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 312 1.0E-58 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AVL55_06255 49a12e74202d9f3aecda5e4315dc94c1 313 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 149 1.9E-17 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain AVL55_07190 6f5bfe3cedd18f976f6f296b83812b98 62 Pfam PF06945 Protein of unknown function (DUF1289) 5 49 9.8E-19 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 AVL55_09225 0d58a6b0499d5dc245f17350c456b6ce 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 8.3E-38 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AVL55_09225 0d58a6b0499d5dc245f17350c456b6ce 105 SUPERFAMILY SSF81301 2 105 1.36E-37 T 11-10-2018 AVL55_09225 0d58a6b0499d5dc245f17350c456b6ce 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.564 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AVL55_09225 0d58a6b0499d5dc245f17350c456b6ce 105 Gene3D G3DSA:3.30.460.10 1 105 7.6E-37 T 11-10-2018 AVL55_09225 0d58a6b0499d5dc245f17350c456b6ce 105 Pfam PF02410 Ribosomal silencing factor during starvation 13 104 2.9E-26 T 11-10-2018 AVL55_14515 6414e08adef870a23dd50b3489f6f7ee 287 Pfam PF03724 META domain 45 164 2.3E-21 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AVL55_14515 6414e08adef870a23dd50b3489f6f7ee 287 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 213 279 1.1E-10 T 11-10-2018 IPR018660 C-type lysozyme inhibitor AVL55_14515 6414e08adef870a23dd50b3489f6f7ee 287 Gene3D G3DSA:2.40.128.200 206 287 9.4E-14 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AVL55_14515 6414e08adef870a23dd50b3489f6f7ee 287 Gene3D G3DSA:2.40.128.270 43 165 7.7E-16 T 11-10-2018 IPR038670 HslJ-like superfamily AVL55_14515 6414e08adef870a23dd50b3489f6f7ee 287 SUPERFAMILY SSF141488 209 283 4.45E-14 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AVL55_12220 c76413bd1ad7beea82fa3bfadb7fbefa 295 PIRSF PIRSF015558 1 284 1.0E-90 T 11-10-2018 IPR016634 WYL domain protein, s026 type AVL55_12220 c76413bd1ad7beea82fa3bfadb7fbefa 295 Pfam PF13280 WYL domain 119 217 4.3E-12 T 11-10-2018 IPR026881 WYL domain AVL55_03785 20b2657a0e7f6765084184cfcb501a0e 735 SUPERFAMILY SSF53098 305 448 2.28E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_03785 20b2657a0e7f6765084184cfcb501a0e 735 Gene3D G3DSA:3.30.420.10 297 535 4.6E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_13445 92ba8530b3770ea352306c0950f42084 193 PIRSF PIRSF016938 1 180 1.0E-22 T 11-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 AVL55_13445 92ba8530b3770ea352306c0950f42084 193 Gene3D G3DSA:1.10.10.880 3 68 1.5E-22 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AVL55_13445 92ba8530b3770ea352306c0950f42084 193 SUPERFAMILY SSF89069 4 68 5.75E-19 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AVL55_13445 92ba8530b3770ea352306c0950f42084 193 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 125 174 2.8E-6 T 11-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AVL55_13445 92ba8530b3770ea352306c0950f42084 193 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 4 77 3.1E-26 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AVL55_00125 d303fdf4dfc87039cfab49c87d16812d 201 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 19 200 38.049 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AVL55_00125 d303fdf4dfc87039cfab49c87d16812d 201 Gene3D G3DSA:3.90.870.10 16 200 9.6E-57 T 11-10-2018 AVL55_00125 d303fdf4dfc87039cfab49c87d16812d 201 Pfam PF01300 Telomere recombination 28 200 1.5E-39 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AVL55_00125 d303fdf4dfc87039cfab49c87d16812d 201 SUPERFAMILY SSF55821 22 197 6.1E-49 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AVL55_11420 64e373e5ba244a038935f4de37aecbb2 210 Pfam PF01545 Cation efflux family 17 198 8.5E-22 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AVL55_11420 64e373e5ba244a038935f4de37aecbb2 210 SUPERFAMILY SSF161111 10 208 6.41E-34 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_11420 64e373e5ba244a038935f4de37aecbb2 210 Gene3D G3DSA:1.20.1510.10 13 205 2.3E-25 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_14080 5f9074cfc82ef6cb5e438f7e3f1865db 386 Pfam PF04230 Polysaccharide pyruvyl transferase 147 325 1.9E-20 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase AVL55_07500 f7915cff14e1bbfa7f28979e6b8c6ce0 501 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 4 489 21.921 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AVL55_07500 f7915cff14e1bbfa7f28979e6b8c6ce0 501 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 56 449 1.5E-87 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AVL55_07500 f7915cff14e1bbfa7f28979e6b8c6ce0 501 SUPERFAMILY SSF56317 207 475 6.8E-35 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AVL55_07500 f7915cff14e1bbfa7f28979e6b8c6ce0 501 Gene3D G3DSA:3.60.110.10 245 465 3.1E-9 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AVL55_07500 f7915cff14e1bbfa7f28979e6b8c6ce0 501 Pfam PF00795 Carbon-nitrogen hydrolase 248 460 2.3E-26 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AVL55_03665 97921166cc2f0302460f9c3f4b7f29f2 263 PIRSF PIRSF016184 1 263 1.5E-48 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AVL55_03665 97921166cc2f0302460f9c3f4b7f29f2 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 262 1.1E-32 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AVL55_03665 97921166cc2f0302460f9c3f4b7f29f2 263 Gene3D G3DSA:3.10.310.10 119 251 2.3E-83 T 11-10-2018 AVL55_03665 97921166cc2f0302460f9c3f4b7f29f2 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 3.1E-53 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AVL55_03665 97921166cc2f0302460f9c3f4b7f29f2 263 SUPERFAMILY SSF54506 1 262 6.7E-75 T 11-10-2018 AVL55_03665 97921166cc2f0302460f9c3f4b7f29f2 263 Gene3D G3DSA:3.10.310.10 7 255 2.3E-83 T 11-10-2018 AVL55_14105 acef02f83304809d3251372793c6ca29 248 SMART SM00710 102 131 84.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_14105 acef02f83304809d3251372793c6ca29 248 SMART SM00710 190 212 4100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_14105 acef02f83304809d3251372793c6ca29 248 SMART SM00710 133 154 510.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_14105 acef02f83304809d3251372793c6ca29 248 SMART SM00710 161 189 700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_14105 acef02f83304809d3251372793c6ca29 248 SMART SM00710 15 37 9000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_14105 acef02f83304809d3251372793c6ca29 248 SMART SM00710 72 101 960.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_14105 acef02f83304809d3251372793c6ca29 248 Pfam PF13229 Right handed beta helix region 126 229 1.0E-5 T 11-10-2018 IPR039448 Right handed beta helix domain AVL55_14105 acef02f83304809d3251372793c6ca29 248 SUPERFAMILY SSF51126 10 228 1.52E-20 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AVL55_14105 acef02f83304809d3251372793c6ca29 248 Gene3D G3DSA:2.160.20.10 2 246 2.0E-17 T 11-10-2018 IPR012334 Pectin lyase fold AVL55_07970 3f08b3de37012ed4f63e0964f2db87a5 85 Gene3D G3DSA:2.60.460.20 18 83 5.3E-5 T 11-10-2018 AVL55_20040 aa714910e5d41a753390ee082fe07fd0 264 Gene3D G3DSA:3.40.50.300 1 262 5.1E-77 T 11-10-2018 AVL55_20040 aa714910e5d41a753390ee082fe07fd0 264 SUPERFAMILY SSF52540 2 258 9.7E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_20040 aa714910e5d41a753390ee082fe07fd0 264 PIRSF PIRSF009320 2 96 6.1E-15 T 11-10-2018 AVL55_20040 aa714910e5d41a753390ee082fe07fd0 264 PIRSF PIRSF009320 98 263 2.9E-8 T 11-10-2018 AVL55_20040 aa714910e5d41a753390ee082fe07fd0 264 Pfam PF13614 AAA domain 3 178 2.6E-63 T 11-10-2018 IPR025669 AAA domain AVL55_08565 7581959cd481ca18156373cc5d65f93c 448 Pfam PF00375 Sodium:dicarboxylate symporter family 10 417 1.8E-131 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AVL55_08565 7581959cd481ca18156373cc5d65f93c 448 SUPERFAMILY SSF118215 10 419 7.06E-121 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AVL55_08565 7581959cd481ca18156373cc5d65f93c 448 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 1.8E-39 T 11-10-2018 AVL55_08565 7581959cd481ca18156373cc5d65f93c 448 PRINTS PR00173 Glutamate-aspartate symporter signature 345 364 1.8E-39 T 11-10-2018 AVL55_08565 7581959cd481ca18156373cc5d65f93c 448 PRINTS PR00173 Glutamate-aspartate symporter signature 208 227 1.8E-39 T 11-10-2018 AVL55_08565 7581959cd481ca18156373cc5d65f93c 448 PRINTS PR00173 Glutamate-aspartate symporter signature 98 123 1.8E-39 T 11-10-2018 AVL55_08565 7581959cd481ca18156373cc5d65f93c 448 PRINTS PR00173 Glutamate-aspartate symporter signature 372 392 1.8E-39 T 11-10-2018 AVL55_08565 7581959cd481ca18156373cc5d65f93c 448 PRINTS PR00173 Glutamate-aspartate symporter signature 310 336 1.8E-39 T 11-10-2018 AVL55_08565 7581959cd481ca18156373cc5d65f93c 448 Gene3D G3DSA:1.10.3860.10 1 435 5.3E-138 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AVL55_15450 56525136237ea34f5688bd0d3eae2d82 213 SUPERFAMILY SSF47616 80 205 1.67E-22 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_15450 56525136237ea34f5688bd0d3eae2d82 213 SUPERFAMILY SSF52833 1 84 1.08E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_15450 56525136237ea34f5688bd0d3eae2d82 213 Gene3D G3DSA:1.20.1050.10 82 197 3.1E-47 T 11-10-2018 AVL55_15450 56525136237ea34f5688bd0d3eae2d82 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 4.5E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_15450 56525136237ea34f5688bd0d3eae2d82 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 198 6.2E-10 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AVL55_15450 56525136237ea34f5688bd0d3eae2d82 213 Gene3D G3DSA:3.40.30.10 4 200 3.1E-47 T 11-10-2018 AVL55_13380 48ce1df548ded2f222dbd8b553cd7e91 135 Gene3D G3DSA:2.40.10.220 1 131 1.1E-27 T 11-10-2018 AVL55_13380 48ce1df548ded2f222dbd8b553cd7e91 135 SUPERFAMILY SSF141371 1 128 5.1E-20 T 11-10-2018 AVL55_13380 48ce1df548ded2f222dbd8b553cd7e91 135 Pfam PF07238 PilZ domain 4 109 1.5E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AVL55_08635 be8d915610dacd570003aca9b7355e92 1123 Gene3D G3DSA:2.40.50.140 29 122 1.1E-31 T 11-10-2018 AVL55_08635 be8d915610dacd570003aca9b7355e92 1123 Pfam PF00575 S1 RNA binding domain 33 115 2.6E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_08635 be8d915610dacd570003aca9b7355e92 1123 Gene3D G3DSA:3.40.1260.20 397 504 9.0E-36 T 11-10-2018 AVL55_08635 be8d915610dacd570003aca9b7355e92 1123 Hamap MF_00970 Ribonuclease E [rne]. 1 1060 34.798 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AVL55_08635 be8d915610dacd570003aca9b7355e92 1123 SMART SM00316 34 116 4.2E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_08635 be8d915610dacd570003aca9b7355e92 1123 SUPERFAMILY SSF50249 37 121 1.5E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_08635 be8d915610dacd570003aca9b7355e92 1123 Pfam PF10150 Ribonuclease E/G family 118 387 5.8E-95 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AVL55_08635 be8d915610dacd570003aca9b7355e92 1123 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 421 1.3E-169 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AVL55_18565 fe314ef3fa7d5e143fda1850a213ae38 157 SUPERFAMILY SSF46785 9 141 8.8E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_18565 fe314ef3fa7d5e143fda1850a213ae38 157 Gene3D G3DSA:1.10.10.10 1 86 1.7E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_18565 fe314ef3fa7d5e143fda1850a213ae38 157 Pfam PF01475 Ferric uptake regulator family 17 135 5.5E-19 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AVL55_18565 fe314ef3fa7d5e143fda1850a213ae38 157 Gene3D G3DSA:3.30.1490.190 89 148 4.6E-18 T 11-10-2018 AVL55_03135 cb7d275b89eebc366eb5747662b82a4a 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.694 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AVL55_03135 cb7d275b89eebc366eb5747662b82a4a 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 5.2E-46 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AVL55_03135 cb7d275b89eebc366eb5747662b82a4a 200 SMART SM01207 10 185 1.1E-77 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AVL55_03135 cb7d275b89eebc366eb5747662b82a4a 200 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 195 3.9E-64 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AVL55_17595 2b5321ee53de76bd4d9cc19b5f7ff3f5 98 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 94 2.1E-9 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AVL55_17595 2b5321ee53de76bd4d9cc19b5f7ff3f5 98 Gene3D G3DSA:3.30.2310.20 1 95 9.8E-20 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AVL55_17595 2b5321ee53de76bd4d9cc19b5f7ff3f5 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 94 1.6E-11 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AVL55_08170 e451366a58f5728cb1865b4fe2d33099 379 Pfam PF00534 Glycosyl transferases group 1 194 345 1.6E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_08170 e451366a58f5728cb1865b4fe2d33099 379 Gene3D G3DSA:3.40.50.2000 71 369 4.6E-48 T 11-10-2018 AVL55_08170 e451366a58f5728cb1865b4fe2d33099 379 Pfam PF13439 Glycosyltransferase Family 4 127 179 1.5E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AVL55_08170 e451366a58f5728cb1865b4fe2d33099 379 SUPERFAMILY SSF53756 10 378 1.26E-54 T 11-10-2018 AVL55_08170 e451366a58f5728cb1865b4fe2d33099 379 Gene3D G3DSA:3.40.50.2000 176 361 4.6E-48 T 11-10-2018 AVL55_01360 0e3a68180a2d7edfeee6e3a57823d7a6 297 Pfam PF05425 Copper resistance protein D 192 288 5.7E-17 T 11-10-2018 IPR008457 Copper resistance protein D GO:0016021 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 SMART SM00304 184 238 1.5E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 Gene3D G3DSA:3.30.565.10 305 452 2.3E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 5.6E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 5.6E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 5.6E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 SUPERFAMILY SSF47384 222 302 9.22E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 Gene3D G3DSA:1.10.287.130 188 302 1.5E-32 T 11-10-2018 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 SUPERFAMILY SSF158472 186 236 1.57E-10 T 11-10-2018 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 SMART SM00388 239 301 4.8E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 SMART SM00387 344 453 2.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 451 2.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 Pfam PF00672 HAMP domain 185 234 5.3E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 SUPERFAMILY SSF55874 291 452 7.6E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_02030 1ea72cac366bbeba611baa87ab605760 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 301 1.6E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_19790 fcc38fb3e9c3c5105c305fd0b3a09ded 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.9E-113 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AVL55_19790 fcc38fb3e9c3c5105c305fd0b3a09ded 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site AVL55_19790 fcc38fb3e9c3c5105c305fd0b3a09ded 237 Gene3D G3DSA:3.30.230.70 13 237 7.1E-62 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_19790 fcc38fb3e9c3c5105c305fd0b3a09ded 237 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.179 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AVL55_19790 fcc38fb3e9c3c5105c305fd0b3a09ded 237 SUPERFAMILY SSF54211 1 181 1.11E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_19790 fcc38fb3e9c3c5105c305fd0b3a09ded 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 5.8E-24 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_19790 fcc38fb3e9c3c5105c305fd0b3a09ded 237 SUPERFAMILY SSF55666 153 236 4.06E-24 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_19790 fcc38fb3e9c3c5105c305fd0b3a09ded 237 Pfam PF03725 3' exoribonuclease family, domain 2 157 223 3.5E-9 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AVL55_17055 32ff7ec7f7b9ff7e106e83d2c96e5327 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 35.776 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AVL55_17055 32ff7ec7f7b9ff7e106e83d2c96e5327 210 PIRSF PIRSF006102 3 210 1.8E-67 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AVL55_17055 32ff7ec7f7b9ff7e106e83d2c96e5327 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 195 1.7E-58 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AVL55_17055 32ff7ec7f7b9ff7e106e83d2c96e5327 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 3.0E-99 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AVL55_12960 02800d6c75554bb7acdd021d9f919245 207 Gene3D G3DSA:1.20.144.10 99 204 8.8E-15 T 11-10-2018 AVL55_12960 02800d6c75554bb7acdd021d9f919245 207 Pfam PF01569 PAP2 superfamily 76 184 5.5E-14 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AVL55_12960 02800d6c75554bb7acdd021d9f919245 207 SUPERFAMILY SSF48317 49 188 1.57E-21 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AVL55_12960 02800d6c75554bb7acdd021d9f919245 207 SMART SM00014 71 183 4.1E-10 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 Gene3D G3DSA:1.10.3860.10 1 398 1.7E-114 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 PRINTS PR00173 Glutamate-aspartate symporter signature 312 331 1.4E-52 T 11-10-2018 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 PRINTS PR00173 Glutamate-aspartate symporter signature 28 48 1.4E-52 T 11-10-2018 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 PRINTS PR00173 Glutamate-aspartate symporter signature 175 194 1.4E-52 T 11-10-2018 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 PRINTS PR00173 Glutamate-aspartate symporter signature 338 358 1.4E-52 T 11-10-2018 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 PRINTS PR00173 Glutamate-aspartate symporter signature 277 303 1.4E-52 T 11-10-2018 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 PRINTS PR00173 Glutamate-aspartate symporter signature 58 83 1.4E-52 T 11-10-2018 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 PRINTS PR00173 Glutamate-aspartate symporter signature 127 149 1.4E-52 T 11-10-2018 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 PRINTS PR00173 Glutamate-aspartate symporter signature 210 229 1.4E-52 T 11-10-2018 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 Pfam PF00375 Sodium:dicarboxylate symporter family 1 383 2.8E-115 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AVL55_07770 0db549f105dbfc5c98fdbb6a2d1da812 401 SUPERFAMILY SSF118215 1 383 1.16E-106 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AVL55_00965 f089f7cd56dda053b1ebda03f4af05cf 404 Gene3D G3DSA:1.10.443.10 173 387 1.9E-20 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_00965 f089f7cd56dda053b1ebda03f4af05cf 404 SUPERFAMILY SSF56349 192 334 9.42E-16 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_00965 f089f7cd56dda053b1ebda03f4af05cf 404 Pfam PF00589 Phage integrase family 191 337 4.2E-14 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_08905 6a3800b01a5436888868fd36b8af8c74 860 Gene3D G3DSA:3.60.10.10 463 817 2.4E-25 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_08905 6a3800b01a5436888868fd36b8af8c74 860 SUPERFAMILY SSF56219 461 819 1.73E-27 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AVL55_05785 9076f9addde069250a69794155586a65 716 SMART SM00471 91 259 0.0033 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_05785 9076f9addde069250a69794155586a65 716 Gene3D G3DSA:1.10.3210.40 33 262 2.5E-25 T 11-10-2018 AVL55_05785 9076f9addde069250a69794155586a65 716 Pfam PF07514 Putative helicase 32 353 6.6E-122 T 11-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative AVL55_05785 9076f9addde069250a69794155586a65 716 SUPERFAMILY SSF109604 96 252 3.84E-7 T 11-10-2018 AVL55_01765 e623566dc53c2327afee061f0033403e 164 SUPERFAMILY SSF56634 14 135 1.02E-17 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01765 e623566dc53c2327afee061f0033403e 164 Pfam PF06628 Catalase-related immune-responsive 67 125 1.9E-16 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AVL55_01765 e623566dc53c2327afee061f0033403e 164 Gene3D G3DSA:2.40.180.10 7 143 1.3E-22 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AVL55_14345 7a6d87f3fe019a8e0e8971b53b6ff592 138 Gene3D G3DSA:3.30.70.100 12 138 6.4E-27 T 11-10-2018 AVL55_14345 7a6d87f3fe019a8e0e8971b53b6ff592 138 SMART SM00886 39 137 1.4E-26 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel AVL55_14345 7a6d87f3fe019a8e0e8971b53b6ff592 138 SUPERFAMILY SSF54909 37 135 1.29E-25 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_14345 7a6d87f3fe019a8e0e8971b53b6ff592 138 Pfam PF07876 Stress responsive A/B Barrel Domain 39 135 3.1E-18 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel AVL55_17315 7531ca3ba1733ff3a3bceb7782bec534 369 Pfam PF13469 Sulfotransferase family 109 300 8.2E-13 T 11-10-2018 AVL55_17315 7531ca3ba1733ff3a3bceb7782bec534 369 SUPERFAMILY SSF52540 108 357 7.59E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17315 7531ca3ba1733ff3a3bceb7782bec534 369 Gene3D G3DSA:3.40.50.300 103 367 1.5E-17 T 11-10-2018 AVL55_14000 41ed5871ddd23f13936dc752f72b2862 189 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 40 3.2E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AVL55_00990 5c45bb57fc823f0871184df795236a1e 187 TIGRFAM TIGR03979 His_Ser_Rich: His-Xaa-Ser repeat protein HxsA 3 185 1.5E-44 T 11-10-2018 IPR023928 Conserved hypothetical protein CHP03979 AVL55_00990 5c45bb57fc823f0871184df795236a1e 187 SUPERFAMILY SSF47090 126 184 1.37E-7 T 11-10-2018 IPR036365 PGBD-like superfamily AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 194 221 1.7E-31 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 168 191 1.7E-31 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 58 84 1.7E-31 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 137 160 1.7E-31 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 298 323 1.7E-31 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 Gene3D G3DSA:3.30.540.10 2 184 3.8E-40 T 11-10-2018 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 SUPERFAMILY SSF56655 8 320 1.65E-73 T 11-10-2018 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 PIRSF PIRSF000904 2 328 9.7E-83 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 PIRSF PIRSF500210 2 327 6.7E-86 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 Gene3D G3DSA:3.40.190.80 186 325 8.5E-44 T 11-10-2018 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 324 33.202 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_16335 7c54cca36dd8741fecb6bc5aad6fda7f 331 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 13 181 9.7E-32 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 PIRSF PIRSF000166 2 310 1.3E-129 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 SUPERFAMILY SSF102886 15 308 3.53E-139 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 13 287 57.534 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 Gene3D G3DSA:3.40.1500.10 7 310 1.8E-139 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 Pfam PF01218 Coproporphyrinogen III oxidase 18 310 5.7E-134 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 176 200 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 PRINTS PR00073 Coprogen oxidase signature 100 124 1.9E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 PRINTS PR00073 Coprogen oxidase signature 41 57 1.9E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 PRINTS PR00073 Coprogen oxidase signature 172 201 1.9E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 PRINTS PR00073 Coprogen oxidase signature 58 79 1.9E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 PRINTS PR00073 Coprogen oxidase signature 135 157 1.9E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 PRINTS PR00073 Coprogen oxidase signature 244 271 1.9E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_00130 a1fc50e58360ab2cf65864b791121c90 310 PRINTS PR00073 Coprogen oxidase signature 272 298 1.9E-86 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AVL55_08055 c83dc20d02e3834c4ebe2627e6c8e0aa 187 Pfam PF06041 Bacterial protein of unknown function (DUF924) 14 182 2.0E-60 T 11-10-2018 IPR010323 Protein of unknown function DUF924 AVL55_08055 c83dc20d02e3834c4ebe2627e6c8e0aa 187 Gene3D G3DSA:1.20.58.320 5 86 2.8E-26 T 11-10-2018 AVL55_08055 c83dc20d02e3834c4ebe2627e6c8e0aa 187 SUPERFAMILY SSF48452 6 182 2.88E-65 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_08055 c83dc20d02e3834c4ebe2627e6c8e0aa 187 Gene3D G3DSA:1.25.40.10 87 186 2.1E-32 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 SMART SM00304 176 228 2.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 1.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 1.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 1.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.3E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 SMART SM00388 229 289 5.5E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 288 3.5E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 Gene3D G3DSA:3.30.565.10 291 439 4.3E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 SMART SM00387 328 438 5.8E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 436 2.4E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 Pfam PF00672 HAMP domain 176 219 7.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 Gene3D G3DSA:1.10.287.130 173 284 2.9E-24 T 11-10-2018 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 SUPERFAMILY SSF47384 213 289 5.3E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AVL55_19300 245f884cfa65d68546d78c40ddcdf07c 439 SUPERFAMILY SSF55874 279 436 4.71E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_11730 2a7a325b125ad92ff16dea34bb061abd 371 Gene3D G3DSA:3.40.640.10 51 268 8.7E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AVL55_11730 2a7a325b125ad92ff16dea34bb061abd 371 Gene3D G3DSA:3.90.1150.10 15 359 8.7E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AVL55_11730 2a7a325b125ad92ff16dea34bb061abd 371 SUPERFAMILY SSF53383 27 366 3.09E-78 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AVL55_11730 2a7a325b125ad92ff16dea34bb061abd 371 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 214 227 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AVL55_11730 2a7a325b125ad92ff16dea34bb061abd 371 Pfam PF00155 Aminotransferase class I and II 32 361 6.1E-46 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 SUPERFAMILY SSF158832 2 317 5.75E-119 T 11-10-2018 AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 Pfam PF12836 Helix-hairpin-helix motif 488 552 1.4E-26 T 11-10-2018 AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 SUPERFAMILY SSF53098 318 466 1.04E-49 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 Gene3D G3DSA:1.10.10.650 1 106 4.1E-41 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 Gene3D G3DSA:1.10.3500.10 109 495 2.9E-154 T 11-10-2018 IPR023323 Tex-like domain superfamily AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 SUPERFAMILY SSF47781 467 553 7.34E-25 T 11-10-2018 IPR010994 RuvA domain 2-like AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 SMART SM00732 322 421 7.0E-36 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 Gene3D G3DSA:2.40.50.140 628 722 4.6E-28 T 11-10-2018 AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 SUPERFAMILY SSF47781 558 629 9.78E-20 T 11-10-2018 IPR010994 RuvA domain 2-like AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 SMART SM00316 646 717 4.3E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 Pfam PF00575 S1 RNA binding domain 646 717 1.6E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 Pfam PF09371 Tex-like protein N-terminal domain 6 189 7.5E-69 T 11-10-2018 IPR018974 Tex-like protein, N-terminal AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 Gene3D G3DSA:3.30.420.140 321 448 2.9E-154 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 SUPERFAMILY SSF50249 634 719 3.36E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 Gene3D G3DSA:1.10.150.310 496 627 4.9E-48 T 11-10-2018 AVL55_19500 95d611d07ebaa63d141d0dd2c0d6aa8a 782 Pfam PF16921 Tex protein YqgF-like domain 322 448 4.4E-53 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain AVL55_00960 f4a00b9ca6d595c982eafca871e4ad9e 194 Gene3D G3DSA:2.40.50.140 2 122 1.7E-49 T 11-10-2018 AVL55_00960 f4a00b9ca6d595c982eafca871e4ad9e 194 Pfam PF00436 Single-strand binding protein family 6 109 1.3E-44 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AVL55_00960 f4a00b9ca6d595c982eafca871e4ad9e 194 Hamap MF_00984 Single-stranded DNA-binding protein. 6 113 39.061 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AVL55_00960 f4a00b9ca6d595c982eafca871e4ad9e 194 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 4 194 7.9E-61 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AVL55_00960 f4a00b9ca6d595c982eafca871e4ad9e 194 SUPERFAMILY SSF50249 5 194 1.37E-57 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AVL55_09355 0878f3222f49772d5454c22d8650e755 348 SUPERFAMILY SSF55869 29 89 4.05E-17 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal AVL55_09355 0878f3222f49772d5454c22d8650e755 348 Gene3D G3DSA:1.10.132.120 97 323 2.0E-69 T 11-10-2018 AVL55_09355 0878f3222f49772d5454c22d8650e755 348 Gene3D G3DSA:3.30.66.10 11 96 9.6E-26 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal AVL55_09355 0878f3222f49772d5454c22d8650e755 348 SUPERFAMILY SSF56349 85 309 2.91E-51 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_09355 0878f3222f49772d5454c22d8650e755 348 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 88 312 3.1E-23 T 11-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AVL55_09355 0878f3222f49772d5454c22d8650e755 348 Gene3D G3DSA:3.90.15.10 120 240 2.0E-69 T 11-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AVL55_16765 494163af679bd2e3d13fe1a772b5fd6f 330 PIRSF PIRSF029693 2 330 1.0E-146 T 11-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 AVL55_16765 494163af679bd2e3d13fe1a772b5fd6f 330 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 10 330 1.9E-150 T 11-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 AVL55_18515 f60967548b5687e2e1c7f5b7b062e0b2 317 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 17 313 30.022 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AVL55_18515 f60967548b5687e2e1c7f5b7b062e0b2 317 SUPERFAMILY SSF52540 17 160 9.52E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18515 f60967548b5687e2e1c7f5b7b062e0b2 317 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 17 302 1.3E-106 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AVL55_18515 f60967548b5687e2e1c7f5b7b062e0b2 317 Gene3D G3DSA:1.10.20.140 124 195 1.0E-106 T 11-10-2018 AVL55_18515 f60967548b5687e2e1c7f5b7b062e0b2 317 Pfam PF01715 IPP transferase 51 296 1.2E-85 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AVL55_18515 f60967548b5687e2e1c7f5b7b062e0b2 317 Gene3D G3DSA:3.40.50.300 21 301 1.0E-106 T 11-10-2018 AVL55_15060 972fcca3c64f5682ab8472b165b135c5 206 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 197 1.1E-44 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AVL55_15060 972fcca3c64f5682ab8472b165b135c5 206 Gene3D G3DSA:3.40.50.10420 3 205 4.8E-52 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AVL55_15060 972fcca3c64f5682ab8472b165b135c5 206 PIRSF PIRSF006806 1 200 1.4E-33 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AVL55_15060 972fcca3c64f5682ab8472b165b135c5 206 SUPERFAMILY SSF100950 4 203 4.46E-51 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AVL55_15060 972fcca3c64f5682ab8472b165b135c5 206 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 197 6.2E-36 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AVL55_19785 b1a231001fbd6e5f88f7729b9ec6f588 213 Pfam PF00156 Phosphoribosyl transferase domain 48 146 7.5E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AVL55_19785 b1a231001fbd6e5f88f7729b9ec6f588 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 33.789 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_19785 b1a231001fbd6e5f88f7729b9ec6f588 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 5.7E-63 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AVL55_19785 b1a231001fbd6e5f88f7729b9ec6f588 213 SUPERFAMILY SSF53271 2 211 2.27E-46 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AVL55_19785 b1a231001fbd6e5f88f7729b9ec6f588 213 Gene3D G3DSA:3.40.50.2020 1 213 1.7E-74 T 11-10-2018 AVL55_12980 267883b0c89b1da7bea72e44542a5c9b 302 Pfam PF01925 Sulfite exporter TauE/SafE 43 296 1.5E-35 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AVL55_16835 2ebc472b10d813348984929b9d8c7929 297 SMART SM00563 89 216 2.8E-12 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_16835 2ebc472b10d813348984929b9d8c7929 297 SUPERFAMILY SSF69593 62 292 1.7E-27 T 11-10-2018 AVL55_16835 2ebc472b10d813348984929b9d8c7929 297 Pfam PF01553 Acyltransferase 79 226 3.5E-14 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 647 8.9E-242 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.8E-51 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.8E-51 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.8E-51 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.8E-51 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.8E-51 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 637 650 3.8E-51 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.8E-51 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.4E-89 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.4E-89 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.4E-89 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.4E-89 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.4E-89 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.4E-89 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.4E-89 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.4E-89 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 Pfam PF01578 Cytochrome C assembly protein 89 296 1.2E-51 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AVL55_04500 932d4ba896d536c12bbf9595aaddcbed 685 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 644 1.2E-123 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AVL55_03900 4356086b907754dd31417866ad8779fa 392 Pfam PF13458 Periplasmic binding protein 30 365 1.5E-42 T 11-10-2018 IPR028081 Leucine-binding protein domain AVL55_03900 4356086b907754dd31417866ad8779fa 392 Gene3D G3DSA:3.40.50.2300 31 355 8.4E-63 T 11-10-2018 AVL55_03900 4356086b907754dd31417866ad8779fa 392 Gene3D G3DSA:3.40.50.2300 150 282 8.4E-63 T 11-10-2018 AVL55_03900 4356086b907754dd31417866ad8779fa 392 SUPERFAMILY SSF53822 28 384 4.45E-61 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 Gene3D G3DSA:1.10.490.10 1 145 2.4E-54 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 SUPERFAMILY SSF63380 151 260 4.94E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 1.2E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 1.2E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 268 287 1.2E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 51.493 T 11-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 1.3E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 366 1.3E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 1.3E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 268 287 1.3E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 Gene3D G3DSA:2.40.30.10 151 260 6.1E-32 T 11-10-2018 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 SUPERFAMILY SSF46458 1 144 2.33E-41 T 11-10-2018 IPR009050 Globin-like superfamily AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 Pfam PF00042 Globin 8 102 3.2E-9 T 11-10-2018 IPR000971 Globin GO:0020037 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 Gene3D G3DSA:3.40.50.80 262 396 1.2E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 Pfam PF00175 Oxidoreductase NAD-binding domain 269 371 4.0E-13 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 SUPERFAMILY SSF52343 249 388 4.45E-28 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AVL55_14415 c2ef640858fab1583acc93077d5feb05 396 Pfam PF00970 Oxidoreductase FAD-binding domain 158 259 1.5E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AVL55_10800 957290ca393331b71887569bd1f8c46d 263 Gene3D G3DSA:1.10.530.10 118 258 5.8E-12 T 11-10-2018 AVL55_10800 957290ca393331b71887569bd1f8c46d 263 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 127 254 4.7E-14 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AVL55_16535 8b6f3ff1557e24f6a9e5e15c9318282b 508 Gene3D G3DSA:3.30.565.10 381 506 2.5E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16535 8b6f3ff1557e24f6a9e5e15c9318282b 508 SUPERFAMILY SSF55874 393 506 5.63E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_16535 8b6f3ff1557e24f6a9e5e15c9318282b 508 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 506 6.5E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_16535 8b6f3ff1557e24f6a9e5e15c9318282b 508 Pfam PF07730 Histidine kinase 314 368 7.6E-8 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AVL55_16535 8b6f3ff1557e24f6a9e5e15c9318282b 508 Pfam PF05231 MASE1 18 278 3.8E-12 T 11-10-2018 IPR007895 MASE1 AVL55_16535 8b6f3ff1557e24f6a9e5e15c9318282b 508 SMART SM00387 411 508 6.0E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AVL55_15185 d4f69d869fc64f2f1f94a4f14d44f5c3 290 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 4 282 2.2E-43 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AVL55_15185 d4f69d869fc64f2f1f94a4f14d44f5c3 290 Gene3D G3DSA:3.40.630.10 5 287 2.9E-104 T 11-10-2018 AVL55_15185 d4f69d869fc64f2f1f94a4f14d44f5c3 290 SUPERFAMILY SSF53187 3 288 1.85E-68 T 11-10-2018 AVL55_15185 d4f69d869fc64f2f1f94a4f14d44f5c3 290 Hamap MF_00704 Probable aspartoacylase. 1 290 29.13 T 11-10-2018 IPR016708 Aspartoacylase GO:0016811 AVL55_15185 d4f69d869fc64f2f1f94a4f14d44f5c3 290 PIRSF PIRSF018001 1 290 1.0E-75 T 11-10-2018 IPR016708 Aspartoacylase GO:0016811 AVL55_15185 d4f69d869fc64f2f1f94a4f14d44f5c3 290 Gene3D G3DSA:2.20.25.160 217 264 2.9E-104 T 11-10-2018 AVL55_01180 6a155a978730f304e599c18e44b99469 135 Pfam PF00717 Peptidase S24-like 46 88 2.8E-6 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AVL55_01180 6a155a978730f304e599c18e44b99469 135 SUPERFAMILY SSF51306 21 124 1.24E-17 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AVL55_01180 6a155a978730f304e599c18e44b99469 135 Gene3D G3DSA:2.10.109.10 14 126 1.6E-27 T 11-10-2018 AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 Gene3D G3DSA:3.40.630.40 151 390 1.7E-71 T 11-10-2018 AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 163 380 8.2E-46 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 Pfam PF11741 AMIN domain 28 128 2.7E-20 T 11-10-2018 IPR021731 AMIN domain AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 SMART SM00646 223 382 3.7E-49 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 SUPERFAMILY SSF53187 161 386 7.53E-52 T 11-10-2018 AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 Pfam PF01476 LysM domain 405 447 4.2E-11 T 11-10-2018 IPR018392 LysM domain AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 Gene3D G3DSA:2.60.40.3500 15 130 6.1E-26 T 11-10-2018 AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 SUPERFAMILY SSF54106 403 447 2.09E-10 T 11-10-2018 AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 Gene3D G3DSA:3.10.350.10 400 449 3.0E-15 T 11-10-2018 IPR036779 LysM domain superfamily AVL55_18525 bf5a93019021d3180b9221f657b2cbbf 449 SMART SM00257 404 447 7.9E-15 T 11-10-2018 IPR018392 LysM domain AVL55_11540 a0dd0a6d42cb884d22a55ad259b01290 288 Gene3D G3DSA:3.20.10.10 127 287 3.8E-51 T 11-10-2018 AVL55_11540 a0dd0a6d42cb884d22a55ad259b01290 288 ProSitePatterns PS00770 Aminotransferases class-IV signature. 186 215 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AVL55_11540 a0dd0a6d42cb884d22a55ad259b01290 288 SUPERFAMILY SSF56752 3 282 2.22E-69 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AVL55_11540 a0dd0a6d42cb884d22a55ad259b01290 288 Gene3D G3DSA:3.30.470.10 1 121 4.1E-30 T 11-10-2018 AVL55_11540 a0dd0a6d42cb884d22a55ad259b01290 288 Pfam PF01063 Amino-transferase class IV 30 260 9.0E-47 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AVL55_19215 613c4f602332888d6b3002193830f105 63 PIRSF PIRSF037225 3 63 4.9E-18 T 11-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 AVL55_19215 613c4f602332888d6b3002193830f105 63 Pfam PF14255 Cysteine-rich CPXCG 10 57 5.4E-13 T 11-10-2018 IPR025990 Cysteine-rich CPXCG protein AVL55_13710 4857dd22486a3cd15b833fd922802180 338 Pfam PF02253 Phospholipase A1 74 335 6.7E-89 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AVL55_13710 4857dd22486a3cd15b833fd922802180 338 PRINTS PR01486 Bacterial phospholipase A1 protein signature 308 328 9.0E-26 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AVL55_13710 4857dd22486a3cd15b833fd922802180 338 PRINTS PR01486 Bacterial phospholipase A1 protein signature 209 227 9.0E-26 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AVL55_13710 4857dd22486a3cd15b833fd922802180 338 PRINTS PR01486 Bacterial phospholipase A1 protein signature 120 137 9.0E-26 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AVL55_13710 4857dd22486a3cd15b833fd922802180 338 PRINTS PR01486 Bacterial phospholipase A1 protein signature 194 208 9.0E-26 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AVL55_13710 4857dd22486a3cd15b833fd922802180 338 PRINTS PR01486 Bacterial phospholipase A1 protein signature 164 183 9.0E-26 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AVL55_13710 4857dd22486a3cd15b833fd922802180 338 SUPERFAMILY SSF56931 77 335 4.32E-85 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AVL55_13710 4857dd22486a3cd15b833fd922802180 338 Gene3D G3DSA:2.40.230.10 75 337 2.3E-82 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AVL55_04580 05078ab2209aaad5cab61a1513511358 295 SUPERFAMILY SSF53448 21 294 1.44E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_04580 05078ab2209aaad5cab61a1513511358 295 Gene3D G3DSA:3.90.550.10 3 262 5.4E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_04580 05078ab2209aaad5cab61a1513511358 295 Pfam PF00535 Glycosyl transferase family 2 21 155 4.9E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_03015 81cfde39fc56382758be12696ac14fad 196 SUPERFAMILY SSF109604 6 185 8.48E-41 T 11-10-2018 AVL55_03015 81cfde39fc56382758be12696ac14fad 196 Pfam PF13023 HD domain 15 178 3.6E-48 T 11-10-2018 IPR006674 HD domain AVL55_03015 81cfde39fc56382758be12696ac14fad 196 Gene3D G3DSA:1.10.3210.10 2 196 3.9E-51 T 11-10-2018 AVL55_08845 42956e8f59bf7a9dcd8dc633258ba803 333 Pfam PF00072 Response regulator receiver domain 12 121 1.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08845 42956e8f59bf7a9dcd8dc633258ba803 333 SMART SM00448 9 121 4.1E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_08845 42956e8f59bf7a9dcd8dc633258ba803 333 Gene3D G3DSA:3.40.50.2300 5 134 3.3E-39 T 11-10-2018 AVL55_08845 42956e8f59bf7a9dcd8dc633258ba803 333 SUPERFAMILY SSF109604 136 320 2.01E-38 T 11-10-2018 AVL55_08845 42956e8f59bf7a9dcd8dc633258ba803 333 Pfam PF13487 HD domain 206 270 7.4E-16 T 11-10-2018 AVL55_08845 42956e8f59bf7a9dcd8dc633258ba803 333 SUPERFAMILY SSF52172 7 132 2.42E-39 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_08845 42956e8f59bf7a9dcd8dc633258ba803 333 SMART SM00471 151 289 1.6E-6 T 11-10-2018 IPR003607 HD/PDEase domain AVL55_08845 42956e8f59bf7a9dcd8dc633258ba803 333 Gene3D G3DSA:1.10.3210.10 135 333 1.7E-72 T 11-10-2018 AVL55_13910 343f3b651cab53a4ccb69c1c099f88e2 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 1.7E-12 T 11-10-2018 IPR007140 Protein of unknown function DUF350 AVL55_13910 343f3b651cab53a4ccb69c1c099f88e2 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 2.9E-12 T 11-10-2018 IPR007140 Protein of unknown function DUF350 AVL55_06185 3a2057e78af837e44aca099e83e45104 418 Pfam PF11199 Protein of unknown function (DUF2891) 89 410 2.2E-135 T 11-10-2018 IPR021365 Protein of unknown function DUF2891 AVL55_04330 4fb25f9e7629f719109f62ddba337a6c 236 Pfam PF04172 LrgB-like family 20 232 8.5E-67 T 11-10-2018 IPR007300 CidB/LrgB family AVL55_16870 2f3d81c9137a6ceb65b1e1bca72f3fa2 116 Pfam PF04134 Protein of unknown function, DUF393 1 95 6.9E-18 T 11-10-2018 IPR007263 Protein of unknown function DUF393 AVL55_11085 8495ca257c25dc7aca9c8125a3b60cbd 655 Pfam PF07693 KAP family P-loop domain 39 129 2.6E-7 T 11-10-2018 IPR011646 KAP family P-loop domain AVL55_11085 8495ca257c25dc7aca9c8125a3b60cbd 655 Pfam PF07693 KAP family P-loop domain 151 243 3.9E-7 T 11-10-2018 IPR011646 KAP family P-loop domain AVL55_11085 8495ca257c25dc7aca9c8125a3b60cbd 655 Gene3D G3DSA:3.40.50.300 26 215 3.0E-10 T 11-10-2018 AVL55_11085 8495ca257c25dc7aca9c8125a3b60cbd 655 SUPERFAMILY SSF52540 41 199 4.36E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_19175 1ac13d0327c4fed118f697b710b57cde 146 SUPERFAMILY SSF52304 1 143 7.85E-63 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AVL55_19175 1ac13d0327c4fed118f697b710b57cde 146 Gene3D G3DSA:3.40.50.9100 1 145 4.2E-66 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AVL55_19175 1ac13d0327c4fed118f697b710b57cde 146 Pfam PF01220 Dehydroquinase class II 2 138 1.6E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AVL55_19175 1ac13d0327c4fed118f697b710b57cde 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AVL55_19175 1ac13d0327c4fed118f697b710b57cde 146 PIRSF PIRSF001399 1 145 6.4E-61 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AVL55_19175 1ac13d0327c4fed118f697b710b57cde 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 140 4.1E-64 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AVL55_19175 1ac13d0327c4fed118f697b710b57cde 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 72.26 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AVL55_19175 1ac13d0327c4fed118f697b710b57cde 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 16 140 2.0E-47 T 11-10-2018 AVL55_09260 0dc94e2b026c039b1fc4367bb43a130f 300 Pfam PF06271 RDD family 201 291 4.6E-16 T 11-10-2018 IPR010432 RDD AVL55_08085 f9c9af27f3a78d5fcde4eceb56ebc941 294 SUPERFAMILY SSF56112 5 283 7.58E-39 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_08085 f9c9af27f3a78d5fcde4eceb56ebc941 294 Pfam PF03881 Fructosamine kinase 1 292 7.9E-94 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AVL55_08085 f9c9af27f3a78d5fcde4eceb56ebc941 294 PIRSF PIRSF006221 1 294 2.4E-86 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AVL55_08085 f9c9af27f3a78d5fcde4eceb56ebc941 294 Gene3D G3DSA:3.90.1200.10 101 294 7.7E-61 T 11-10-2018 AVL55_08085 f9c9af27f3a78d5fcde4eceb56ebc941 294 Gene3D G3DSA:3.30.200.20 1 97 3.6E-16 T 11-10-2018 AVL55_13580 3241b3ee17973babdf307463dcb40e92 87 Gene3D G3DSA:1.20.58.110 1 87 5.2E-32 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_13580 3241b3ee17973babdf307463dcb40e92 87 Pfam PF01649 Ribosomal protein S20 2 84 1.0E-28 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_13580 3241b3ee17973babdf307463dcb40e92 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.1E-31 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_13580 3241b3ee17973babdf307463dcb40e92 87 SUPERFAMILY SSF46992 3 86 8.24E-33 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_13580 3241b3ee17973babdf307463dcb40e92 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 18.327 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_13580 3241b3ee17973babdf307463dcb40e92 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 4.0E-25 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_14315 90ce7c4d87926c962773b80d077e4999 628 Gene3D G3DSA:2.40.170.20 154 627 2.2E-21 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_14315 90ce7c4d87926c962773b80d077e4999 628 SUPERFAMILY SSF56935 49 626 2.75E-34 T 11-10-2018 AVL55_13925 e88957ea88e45d7be2b7984369e40553 179 SUPERFAMILY SSF144091 10 178 1.57E-24 T 11-10-2018 AVL55_13925 e88957ea88e45d7be2b7984369e40553 179 Pfam PF01694 Rhomboid family 48 178 2.4E-20 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AVL55_13925 e88957ea88e45d7be2b7984369e40553 179 Gene3D G3DSA:1.20.1540.10 7 178 3.2E-13 T 11-10-2018 IPR035952 Rhomboid-like superfamily AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 3.4E-61 T 11-10-2018 AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 Gene3D G3DSA:3.40.50.720 2 253 5.2E-77 T 11-10-2018 AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08755 2d3aad94c7370e0b149617126586da9d 254 SUPERFAMILY SSF51735 5 253 2.33E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_16175 45e93db24b9f2adee511c34b924bd268 107 Gene3D G3DSA:1.10.260.40 2 77 1.2E-31 T 11-10-2018 AVL55_16175 45e93db24b9f2adee511c34b924bd268 107 SMART SM00530 16 69 1.2E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_16175 45e93db24b9f2adee511c34b924bd268 107 SUPERFAMILY SSF47413 11 72 6.17E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_16175 45e93db24b9f2adee511c34b924bd268 107 Pfam PF01381 Helix-turn-helix 17 61 9.0E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_00045 6141267b379a7ffaf6ced6cd632d71f5 153 Pfam PF10675 Protein of unknown function (DUF2489) 14 139 1.9E-42 T 11-10-2018 IPR019617 Domain of unknown function DUF2489 AVL55_00045 6141267b379a7ffaf6ced6cd632d71f5 153 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 55 - T 11-10-2018 IPR010916 TonB box, conserved site AVL55_05620 8e7df0306ae32ff5c4c5937a1921075b 413 Pfam PF13356 Arm DNA-binding domain 21 88 5.5E-14 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AVL55_05620 8e7df0306ae32ff5c4c5937a1921075b 413 Pfam PF00589 Phage integrase family 207 378 4.2E-12 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_05620 8e7df0306ae32ff5c4c5937a1921075b 413 Gene3D G3DSA:3.30.160.390 1 89 3.2E-18 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AVL55_05620 8e7df0306ae32ff5c4c5937a1921075b 413 Gene3D G3DSA:1.10.443.10 205 383 4.2E-13 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_05620 8e7df0306ae32ff5c4c5937a1921075b 413 SUPERFAMILY SSF56349 99 388 2.18E-43 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_05620 8e7df0306ae32ff5c4c5937a1921075b 413 Gene3D G3DSA:1.10.150.130 90 204 2.6E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AVL55_19880 a8aba7fdead7e68d2830d6e69c35ab57 129 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 19 117 4.0E-11 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AVL55_19880 a8aba7fdead7e68d2830d6e69c35ab57 129 Pfam PF03203 MerC mercury resistance protein 7 117 6.7E-11 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AVL55_09155 301c03d13d64c18953c12c7df9505417 621 Gene3D G3DSA:3.90.226.10 96 316 2.9E-159 T 11-10-2018 AVL55_09155 301c03d13d64c18953c12c7df9505417 621 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 333 544 3.1E-52 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AVL55_09155 301c03d13d64c18953c12c7df9505417 621 Gene3D G3DSA:3.40.1750.10 187 502 2.9E-159 T 11-10-2018 AVL55_09155 301c03d13d64c18953c12c7df9505417 621 Gene3D G3DSA:3.90.226.10 319 544 2.9E-159 T 11-10-2018 AVL55_09155 301c03d13d64c18953c12c7df9505417 621 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 613 1.7E-181 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AVL55_09155 301c03d13d64c18953c12c7df9505417 621 SUPERFAMILY SSF52096 319 533 4.24E-43 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_09155 301c03d13d64c18953c12c7df9505417 621 Pfam PF01343 Peptidase family S49 139 296 1.9E-27 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AVL55_09155 301c03d13d64c18953c12c7df9505417 621 Pfam PF01343 Peptidase family S49 396 546 2.1E-48 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AVL55_09155 301c03d13d64c18953c12c7df9505417 621 PIRSF PIRSF001217 8 621 2.6E-205 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AVL55_09155 301c03d13d64c18953c12c7df9505417 621 SUPERFAMILY SSF52096 29 286 3.89E-25 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_15075 6ba7514a542265441cef6713533a2342 252 Pfam PF04338 Protein of unknown function, DUF481 33 251 6.3E-58 T 11-10-2018 IPR007433 Protein of unknown function DUF481 AVL55_10220 1cd6bcb28593286b67e16ee80204b1af 549 Gene3D G3DSA:3.30.420.10 152 355 4.1E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_10220 1cd6bcb28593286b67e16ee80204b1af 549 SUPERFAMILY SSF53098 153 332 1.39E-14 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_10220 1cd6bcb28593286b67e16ee80204b1af 549 Pfam PF00665 Integrase core domain 156 296 1.3E-9 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AVL55_07895 6bcb84f7b3a6c9b61d41a125e16a3757 249 SUPERFAMILY SSF48695 57 149 5.37E-6 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AVL55_09725 cf5a7f80af7b397ea922680f2d9aa1b9 248 Pfam PF08242 Methyltransferase domain 47 136 3.5E-13 T 11-10-2018 IPR013217 Methyltransferase type 12 AVL55_09725 cf5a7f80af7b397ea922680f2d9aa1b9 248 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 247 35.861 T 11-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AVL55_09725 cf5a7f80af7b397ea922680f2d9aa1b9 248 SUPERFAMILY SSF53335 3 246 6.37E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_09725 cf5a7f80af7b397ea922680f2d9aa1b9 248 Gene3D G3DSA:3.40.50.150 9 248 5.1E-50 T 11-10-2018 AVL55_13890 be11a1845f49a53faacdff9403d21db4 129 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 12 128 2.8E-38 T 11-10-2018 IPR019231 Protein of unknown function DUF2170 AVL55_19525 c8523839853caa0fc764b10443634b55 237 Gene3D G3DSA:3.40.50.2020 102 232 1.7E-7 T 11-10-2018 AVL55_19525 c8523839853caa0fc764b10443634b55 237 SUPERFAMILY SSF53271 49 220 6.39E-16 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AVL55_14205 68c992200410f1e38daa69399dd5e6d7 373 Pfam PF01609 Transposase DDE domain 109 334 7.5E-23 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AVL55_14205 68c992200410f1e38daa69399dd5e6d7 373 Pfam PF13808 DDE_Tnp_1-associated 9 94 4.1E-29 T 11-10-2018 IPR032806 H repeat-associated protein, N-terminal AVL55_16615 7ed9609152f301c3a8e7f4ae0cdfd517 738 Gene3D G3DSA:3.30.870.10 256 417 1.2E-18 T 11-10-2018 AVL55_16615 7ed9609152f301c3a8e7f4ae0cdfd517 738 SUPERFAMILY SSF56024 8 252 2.71E-26 T 11-10-2018 AVL55_16615 7ed9609152f301c3a8e7f4ae0cdfd517 738 SUPERFAMILY SSF56024 260 426 2.47E-20 T 11-10-2018 AVL55_16615 7ed9609152f301c3a8e7f4ae0cdfd517 738 Pfam PF13091 PLD-like domain 267 399 1.1E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AVL55_16615 7ed9609152f301c3a8e7f4ae0cdfd517 738 Gene3D G3DSA:3.30.870.10 11 227 1.1E-23 T 11-10-2018 AVL55_16615 7ed9609152f301c3a8e7f4ae0cdfd517 738 Pfam PF09335 SNARE associated Golgi protein 558 674 2.2E-17 T 11-10-2018 IPR032816 SNARE associated Golgi protein AVL55_16615 7ed9609152f301c3a8e7f4ae0cdfd517 738 Pfam PF00614 Phospholipase D Active site motif 132 155 1.8E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AVL55_16615 7ed9609152f301c3a8e7f4ae0cdfd517 738 SMART SM00155 132 159 0.007 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AVL55_16615 7ed9609152f301c3a8e7f4ae0cdfd517 738 SMART SM00155 358 385 8.1E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AVL55_12545 15836a8f85cc551a0e359c23a1b4c732 507 PIRSF PIRSF000485 1 481 8.6E-166 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AVL55_12545 15836a8f85cc551a0e359c23a1b4c732 507 Gene3D G3DSA:3.60.20.10 2 412 3.7E-155 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_12545 15836a8f85cc551a0e359c23a1b4c732 507 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.862 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AVL55_12545 15836a8f85cc551a0e359c23a1b4c732 507 SUPERFAMILY SSF56235 2 257 1.54E-70 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_12545 15836a8f85cc551a0e359c23a1b4c732 507 Gene3D G3DSA:3.40.50.2020 277 441 3.7E-155 T 11-10-2018 AVL55_12545 15836a8f85cc551a0e359c23a1b4c732 507 Pfam PF13522 Glutamine amidotransferase domain 64 208 3.2E-17 T 11-10-2018 AVL55_12545 15836a8f85cc551a0e359c23a1b4c732 507 Pfam PF00156 Phosphoribosyl transferase domain 280 392 7.7E-8 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AVL55_12545 15836a8f85cc551a0e359c23a1b4c732 507 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 8.7E-157 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AVL55_12545 15836a8f85cc551a0e359c23a1b4c732 507 SUPERFAMILY SSF53271 250 481 6.42E-69 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AVL55_17605 8e2b910b3c1ee09c9214d1a3b8fe79ce 151 SUPERFAMILY SSF56935 33 151 1.33E-18 T 11-10-2018 AVL55_17605 8e2b910b3c1ee09c9214d1a3b8fe79ce 151 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 151 9.1E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_17605 8e2b910b3c1ee09c9214d1a3b8fe79ce 151 Gene3D G3DSA:2.170.130.10 33 151 8.4E-19 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_19105 691a2ad0b91cee8cc4478d8c054600b3 123 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 33 107 8.8E-14 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AVL55_19105 691a2ad0b91cee8cc4478d8c054600b3 123 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 26 122 1.1E-32 T 11-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AVL55_07205 0d5bfd0c72e789222584ed90694b5a36 218 Gene3D G3DSA:3.40.50.1110 34 216 9.8E-63 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AVL55_07205 0d5bfd0c72e789222584ed90694b5a36 218 SUPERFAMILY SSF52266 37 213 1.15E-45 T 11-10-2018 AVL55_07205 0d5bfd0c72e789222584ed90694b5a36 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 40 198 5.4E-21 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AVL55_06535 d2e215f25f96b1b65b3e289756573de0 234 Pfam PF11859 Protein of unknown function (DUF3379) 1 230 3.8E-81 T 11-10-2018 IPR021806 Protein of unknown function DUF3379 AVL55_07230 71a2c913d6aa78bb2fced73a4b79a4fc 346 Pfam PF01594 AI-2E family transporter 13 325 3.5E-61 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AVL55_04970 32c603873ace9ccb4895c00704ced5e6 188 SUPERFAMILY SSF55729 10 156 9.35E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_04970 32c603873ace9ccb4895c00704ced5e6 188 Gene3D G3DSA:3.40.630.30 5 171 1.7E-23 T 11-10-2018 AVL55_04970 32c603873ace9ccb4895c00704ced5e6 188 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 2.3E-9 T 11-10-2018 IPR000182 GNAT domain AVL55_08805 88df58adffdafdcafbf7d614f4ead6bc 149 Gene3D G3DSA:3.10.129.10 3 145 2.0E-34 T 11-10-2018 AVL55_08805 88df58adffdafdcafbf7d614f4ead6bc 149 Pfam PF01575 MaoC like domain 10 123 1.3E-25 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AVL55_08805 88df58adffdafdcafbf7d614f4ead6bc 149 SUPERFAMILY SSF54637 6 146 5.11E-32 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_04830 d1ddf80de470a2f0449dfbe369b3ee15 109 SUPERFAMILY SSF101498 24 101 5.89E-15 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily AVL55_04830 d1ddf80de470a2f0449dfbe369b3ee15 109 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 101 2.0E-19 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AVL55_04830 d1ddf80de470a2f0449dfbe369b3ee15 109 Pfam PF04316 Anti-sigma-28 factor, FlgM 47 99 1.8E-15 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AVL55_07780 60c827bf3ade8e4008b167bd66e57188 228 SUPERFAMILY SSF55166 22 182 1.53E-20 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AVL55_07780 60c827bf3ade8e4008b167bd66e57188 228 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 26 181 5.5E-35 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AVL55_07780 60c827bf3ade8e4008b167bd66e57188 228 Gene3D G3DSA:3.30.1380.10 3 198 2.4E-33 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AVL55_01640 447e13cf16ca017b67aee61e27c8b99c 369 Gene3D G3DSA:3.40.50.2000 160 343 4.5E-57 T 11-10-2018 AVL55_01640 447e13cf16ca017b67aee61e27c8b99c 369 Gene3D G3DSA:3.40.50.2000 63 356 4.5E-57 T 11-10-2018 AVL55_01640 447e13cf16ca017b67aee61e27c8b99c 369 Pfam PF00534 Glycosyl transferases group 1 178 335 1.3E-29 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_01640 447e13cf16ca017b67aee61e27c8b99c 369 Pfam PF13439 Glycosyltransferase Family 4 17 163 2.9E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AVL55_01640 447e13cf16ca017b67aee61e27c8b99c 369 SUPERFAMILY SSF53756 7 359 1.01E-64 T 11-10-2018 AVL55_07965 9a8983ca8d24c0a562c1009755429560 309 SUPERFAMILY SSF88713 6 300 9.14E-93 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AVL55_07965 9a8983ca8d24c0a562c1009755429560 309 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 300 1.5E-158 T 11-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 AVL55_07965 9a8983ca8d24c0a562c1009755429560 309 Gene3D G3DSA:3.20.20.370 1 304 5.9E-105 T 11-10-2018 AVL55_07965 9a8983ca8d24c0a562c1009755429560 309 Pfam PF01522 Polysaccharide deacetylase 76 164 1.7E-15 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AVL55_17520 167991fd23e6d9d55b60fbcdf13b2ed3 144 Gene3D G3DSA:3.100.10.10 69 144 8.3E-14 T 11-10-2018 AVL55_17520 167991fd23e6d9d55b60fbcdf13b2ed3 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.7E-44 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_17520 167991fd23e6d9d55b60fbcdf13b2ed3 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.457 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AVL55_17520 167991fd23e6d9d55b60fbcdf13b2ed3 144 SUPERFAMILY SSF52080 4 143 5.23E-44 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AVL55_17520 167991fd23e6d9d55b60fbcdf13b2ed3 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 6.3E-29 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P AVL55_15045 4ebb350f154556ebd43554587ed04543 313 Gene3D G3DSA:3.90.245.10 1 312 1.3E-105 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like AVL55_15045 4ebb350f154556ebd43554587ed04543 313 SUPERFAMILY SSF53590 1 311 4.71E-93 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like AVL55_15045 4ebb350f154556ebd43554587ed04543 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 303 4.1E-82 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AVL55_08280 446f176dd6d9811dc0237cd8dd8f6605 800 Gene3D G3DSA:1.10.1400.10 559 695 2.0E-95 T 11-10-2018 AVL55_08280 446f176dd6d9811dc0237cd8dd8f6605 800 Gene3D G3DSA:1.10.439.10 22 178 2.1E-40 T 11-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 AVL55_08280 446f176dd6d9811dc0237cd8dd8f6605 800 Pfam PF01804 Penicillin amidase 48 783 7.5E-123 T 11-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AVL55_08280 446f176dd6d9811dc0237cd8dd8f6605 800 PIRSF PIRSF001227 7 792 1.0E-125 T 11-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AVL55_08280 446f176dd6d9811dc0237cd8dd8f6605 800 Gene3D G3DSA:2.30.120.10 361 412 2.0E-95 T 11-10-2018 AVL55_08280 446f176dd6d9811dc0237cd8dd8f6605 800 SUPERFAMILY SSF56235 44 787 4.12E-164 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_08280 446f176dd6d9811dc0237cd8dd8f6605 800 Gene3D G3DSA:3.60.20.10 285 776 2.0E-95 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_02625 958ce53c509a01ffaf2818deda604ac5 253 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 5 225 42.754 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AVL55_02625 958ce53c509a01ffaf2818deda604ac5 253 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 227 4.0E-79 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AVL55_02625 958ce53c509a01ffaf2818deda604ac5 253 SUPERFAMILY SSF53448 6 226 5.83E-65 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_02625 958ce53c509a01ffaf2818deda604ac5 253 Gene3D G3DSA:3.90.550.10 2 233 3.3E-76 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_02625 958ce53c509a01ffaf2818deda604ac5 253 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 224 7.4E-72 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AVL55_04805 c89511d0f668b4ffa4eae9601ccc19b3 195 SUPERFAMILY SSF160443 100 179 2.22E-7 T 11-10-2018 IPR036063 Smr domain superfamily AVL55_04805 c89511d0f668b4ffa4eae9601ccc19b3 195 Gene3D G3DSA:3.30.1370.110 50 185 4.5E-35 T 11-10-2018 AVL55_04805 c89511d0f668b4ffa4eae9601ccc19b3 195 Pfam PF01713 Smr domain 100 179 8.4E-14 T 11-10-2018 IPR002625 Smr domain AVL55_13125 45ff7d8b63869d5c892c12ccec5b797d 254 Gene3D G3DSA:1.10.10.2180 131 253 8.0E-6 T 11-10-2018 AVL55_13125 45ff7d8b63869d5c892c12ccec5b797d 254 Gene3D G3DSA:1.10.150.690 33 127 3.5E-26 T 11-10-2018 AVL55_13125 45ff7d8b63869d5c892c12ccec5b797d 254 Pfam PF09836 Putative DNA-binding domain 8 97 2.1E-19 T 11-10-2018 IPR018640 Putative DNA-binding domain, bacteria AVL55_14675 775b2f2a4815fccb3f383a1725c5afb0 317 Pfam PF03631 Virulence factor BrkB 33 285 3.3E-60 T 11-10-2018 IPR017039 Virulence factor BrkB AVL55_14675 775b2f2a4815fccb3f383a1725c5afb0 317 PIRSF PIRSF035875 5 305 5.6E-66 T 11-10-2018 IPR017039 Virulence factor BrkB AVL55_14675 775b2f2a4815fccb3f383a1725c5afb0 317 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 25 284 1.8E-31 T 11-10-2018 IPR017039 Virulence factor BrkB AVL55_08605 897ff7a3e3ca33a201c10878adbe0a1c 260 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 244 1.1E-44 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AVL55_08605 897ff7a3e3ca33a201c10878adbe0a1c 260 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 260 25.408 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AVL55_08605 897ff7a3e3ca33a201c10878adbe0a1c 260 PIRSF PIRSF015626 2 260 1.5E-61 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AVL55_08605 897ff7a3e3ca33a201c10878adbe0a1c 260 Pfam PF02634 FdhD/NarQ family 24 259 2.6E-60 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AVL55_08605 897ff7a3e3ca33a201c10878adbe0a1c 260 Gene3D G3DSA:3.10.20.10 26 111 9.6E-6 T 11-10-2018 AVL55_08605 897ff7a3e3ca33a201c10878adbe0a1c 260 SUPERFAMILY SSF53927 11 259 1.59E-63 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AVL55_08605 897ff7a3e3ca33a201c10878adbe0a1c 260 Gene3D G3DSA:3.40.140.10 116 260 3.3E-38 T 11-10-2018 AVL55_17395 eb95fb2e06fe47b30a8d4edbcc65e0a1 720 SUPERFAMILY SSF69318 230 531 1.57E-14 T 11-10-2018 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 7.0E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.396 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 Pfam PF01165 Ribosomal protein S21 4 56 1.3E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 Gene3D G3DSA:1.20.5.1150 16 54 1.3E-20 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.3E-24 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_03120 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_13935 85215a9666ea321da830497ca3a26818 240 Pfam PF00005 ABC transporter 20 171 2.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_13935 85215a9666ea321da830497ca3a26818 240 Gene3D G3DSA:3.40.50.300 1 239 4.0E-56 T 11-10-2018 AVL55_13935 85215a9666ea321da830497ca3a26818 240 SUPERFAMILY SSF52540 1 225 1.78E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13935 85215a9666ea321da830497ca3a26818 240 SMART SM00382 28 230 8.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_02055 652b03ce4c5fcfba298e41da8b9ba39c 469 SUPERFAMILY SSF56954 10 459 5.36E-63 T 11-10-2018 AVL55_02055 652b03ce4c5fcfba298e41da8b9ba39c 469 Gene3D G3DSA:1.20.1600.10 59 463 5.5E-72 T 11-10-2018 AVL55_02055 652b03ce4c5fcfba298e41da8b9ba39c 469 Gene3D G3DSA:2.20.200.10 106 353 5.5E-72 T 11-10-2018 AVL55_02055 652b03ce4c5fcfba298e41da8b9ba39c 469 Pfam PF02321 Outer membrane efflux protein 285 453 9.2E-17 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_02055 652b03ce4c5fcfba298e41da8b9ba39c 469 Pfam PF02321 Outer membrane efflux protein 72 252 1.3E-15 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_05035 2e5e8968600f2503bf162cd79253dcc2 325 SUPERFAMILY SSF51735 2 321 4.3E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_05035 2e5e8968600f2503bf162cd79253dcc2 325 Gene3D G3DSA:3.90.25.10 179 317 1.1E-87 T 11-10-2018 AVL55_05035 2e5e8968600f2503bf162cd79253dcc2 325 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 247 1.2E-55 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AVL55_05035 2e5e8968600f2503bf162cd79253dcc2 325 Gene3D G3DSA:3.40.50.720 9 305 1.1E-87 T 11-10-2018 AVL55_17545 35bd2abf5c8b034883bef610cb0b1ce0 130 SUPERFAMILY SSF56047 2 129 5.1E-45 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17545 35bd2abf5c8b034883bef610cb0b1ce0 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.542 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17545 35bd2abf5c8b034883bef610cb0b1ce0 130 Pfam PF00410 Ribosomal protein S8 5 129 1.4E-47 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17545 35bd2abf5c8b034883bef610cb0b1ce0 130 Gene3D G3DSA:3.30.1370.30 2 72 2.1E-26 T 11-10-2018 AVL55_17545 35bd2abf5c8b034883bef610cb0b1ce0 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_17545 35bd2abf5c8b034883bef610cb0b1ce0 130 Gene3D G3DSA:3.30.1490.10 73 130 3.6E-23 T 11-10-2018 AVL55_03230 4dd23d3b6897120f431a2e7e0d302f5d 172 Pfam PF01618 MotA/TolQ/ExbB proton channel family 61 165 2.3E-21 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AVL55_19945 71f869d0c5ce06aef3cd803e4d361e54 389 Pfam PF07786 Protein of unknown function (DUF1624) 12 227 8.9E-16 T 11-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 AVL55_14465 5280fbac6f88e691c68c564cb12bde87 164 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 8 139 7.3E-51 T 11-10-2018 IPR027565 Cupin fold metalloprotein, WbuC family AVL55_14465 5280fbac6f88e691c68c564cb12bde87 164 SUPERFAMILY SSF51182 33 139 8.66E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_14465 5280fbac6f88e691c68c564cb12bde87 164 Gene3D G3DSA:2.60.120.10 11 135 2.0E-9 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_08315 14fd1caa6c4807cd7938bdefd10cd3fa 187 SUPERFAMILY SSF53271 3 162 1.04E-27 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AVL55_08315 14fd1caa6c4807cd7938bdefd10cd3fa 187 Gene3D G3DSA:3.40.50.2020 1 185 2.7E-35 T 11-10-2018 AVL55_08315 14fd1caa6c4807cd7938bdefd10cd3fa 187 Pfam PF00156 Phosphoribosyl transferase domain 9 161 4.0E-13 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AVL55_15980 e5265827fdd1894c2f6300122f265c34 398 Pfam PF01566 Natural resistance-associated macrophage protein 20 371 3.3E-81 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AVL55_14370 c5541541af6008e1e21ef12a4915e69f 386 Pfam PF01594 AI-2E family transporter 29 372 1.5E-43 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AVL55_18435 6d03175543418c1a2fac0cbe232aa695 219 Gene3D G3DSA:3.40.30.10 2 201 6.4E-81 T 11-10-2018 AVL55_18435 6d03175543418c1a2fac0cbe232aa695 219 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 2.8E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AVL55_18435 6d03175543418c1a2fac0cbe232aa695 219 SUPERFAMILY SSF47616 74 199 1.67E-32 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AVL55_18435 6d03175543418c1a2fac0cbe232aa695 219 Gene3D G3DSA:1.20.1050.10 84 191 6.4E-81 T 11-10-2018 AVL55_18435 6d03175543418c1a2fac0cbe232aa695 219 SUPERFAMILY SSF52833 1 80 1.84E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_18435 6d03175543418c1a2fac0cbe232aa695 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 192 3.2E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AVL55_19760 52df1efeadcecb5191233a776bcc29d9 430 SUPERFAMILY SSF51338 20 427 2.48E-16 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_19760 52df1efeadcecb5191233a776bcc29d9 430 Gene3D G3DSA:2.30.40.10 29 425 2.4E-141 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AVL55_19760 52df1efeadcecb5191233a776bcc29d9 430 Gene3D G3DSA:3.20.20.140 82 390 2.4E-141 T 11-10-2018 AVL55_19760 52df1efeadcecb5191233a776bcc29d9 430 Pfam PF01979 Amidohydrolase family 76 426 1.9E-53 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AVL55_19760 52df1efeadcecb5191233a776bcc29d9 430 SUPERFAMILY SSF51556 80 391 4.86E-110 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_02620 72035dea7b460512165b9f67745f91a0 157 SUPERFAMILY SSF69765 1 156 1.57E-65 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AVL55_02620 72035dea7b460512165b9f67745f91a0 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 35.68 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AVL55_02620 72035dea7b460512165b9f67745f91a0 157 Gene3D G3DSA:3.30.1330.50 1 157 4.9E-68 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AVL55_02620 72035dea7b460512165b9f67745f91a0 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AVL55_02620 72035dea7b460512165b9f67745f91a0 157 Pfam PF02542 YgbB family 1 155 2.5E-66 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AVL55_02620 72035dea7b460512165b9f67745f91a0 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 1.5E-69 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AVL55_09490 13826e4f628cb2f47146ac2e4eab58a7 175 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 163 3.4E-48 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 AVL55_01955 65d19368d3cb326e0d65ee7ee7eb1b25 328 Pfam PF14321 Domain of unknown function (DUF4382) 51 189 7.0E-25 T 11-10-2018 IPR025491 Domain of unknown function DUF4382 AVL55_14460 39ee904695cf0f86b133e532ea788048 73 Pfam PF13744 Helix-turn-helix domain 6 62 8.2E-8 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain AVL55_14460 39ee904695cf0f86b133e532ea788048 73 SUPERFAMILY SSF47413 5 67 6.57E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_14460 39ee904695cf0f86b133e532ea788048 73 Gene3D G3DSA:1.10.260.40 1 64 7.3E-10 T 11-10-2018 AVL55_04665 9e97d4a726965c128c77879ab920703f 279 Pfam PF00849 RNA pseudouridylate synthase 50 208 3.1E-32 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_04665 9e97d4a726965c128c77879ab920703f 279 SUPERFAMILY SSF55120 36 274 2.72E-57 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_04665 9e97d4a726965c128c77879ab920703f 279 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 90 104 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AVL55_04665 9e97d4a726965c128c77879ab920703f 279 Gene3D G3DSA:3.30.2350.10 43 276 2.1E-55 T 11-10-2018 AVL55_15965 e21355582a649a5425daa5a750ebe1af 142 PIRSF PIRSF004638 1 142 8.0E-49 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AVL55_15965 e21355582a649a5425daa5a750ebe1af 142 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 2.5E-47 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AVL55_06755 7aa25cf4eaa83d6b1121918bf8ff233c 146 Pfam PF05099 Tellurite resistance protein TerB 10 139 1.0E-34 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AVL55_06755 7aa25cf4eaa83d6b1121918bf8ff233c 146 SUPERFAMILY SSF158682 15 142 9.68E-23 T 11-10-2018 IPR029024 TerB-like AVL55_06755 7aa25cf4eaa83d6b1121918bf8ff233c 146 Gene3D G3DSA:1.10.3680.10 1 136 3.4E-17 T 11-10-2018 IPR029024 TerB-like AVL55_14535 0a8b2906daf9f2823ae6708f59d3335b 240 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 26 238 2.7E-20 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AVL55_14535 0a8b2906daf9f2823ae6708f59d3335b 240 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 10 238 6.5E-53 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AVL55_15835 acfdc7ea629ca1880d0cc7107f11379e 452 SUPERFAMILY SSF51905 14 412 5.67E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15835 acfdc7ea629ca1880d0cc7107f11379e 452 Gene3D G3DSA:3.50.50.60 43 408 5.6E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_15835 acfdc7ea629ca1880d0cc7107f11379e 452 Pfam PF01266 FAD dependent oxidoreductase 42 409 7.9E-44 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AVL55_15835 acfdc7ea629ca1880d0cc7107f11379e 452 Gene3D G3DSA:3.30.9.10 135 360 5.6E-57 T 11-10-2018 AVL55_07260 3a34e6a08ebf320ea214a2c1fe0d5d27 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 6.4E-97 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AVL55_07260 3a34e6a08ebf320ea214a2c1fe0d5d27 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.3E-89 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AVL55_07260 3a34e6a08ebf320ea214a2c1fe0d5d27 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 36.584 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AVL55_07260 3a34e6a08ebf320ea214a2c1fe0d5d27 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AVL55_07260 3a34e6a08ebf320ea214a2c1fe0d5d27 269 SUPERFAMILY SSF51366 1 266 8.1E-88 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AVL55_07260 3a34e6a08ebf320ea214a2c1fe0d5d27 269 Gene3D G3DSA:3.20.20.70 1 268 7.8E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 SUPERFAMILY SSF55021 333 408 2.59E-16 T 11-10-2018 AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 8.5E-39 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 SUPERFAMILY SSF52283 7 135 1.38E-50 T 11-10-2018 AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 Gene3D G3DSA:3.30.70.260 328 408 3.5E-32 T 11-10-2018 AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 SUPERFAMILY SSF51735 108 295 2.11E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 Gene3D G3DSA:3.40.50.720 109 297 3.6E-111 T 11-10-2018 AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 Gene3D G3DSA:3.40.50.720 14 312 3.6E-111 T 11-10-2018 AVL55_15070 9f0461e80e95339f01f4a512d07001db 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 3.5E-53 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AVL55_09855 5dfd2a8e4d149062693ff9305089c3fc 137 SUPERFAMILY SSF54637 4 134 1.12E-23 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_09855 5dfd2a8e4d149062693ff9305089c3fc 137 Pfam PF03061 Thioesterase superfamily 45 118 1.4E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AVL55_09855 5dfd2a8e4d149062693ff9305089c3fc 137 Gene3D G3DSA:3.10.129.10 4 135 2.5E-49 T 11-10-2018 AVL55_04820 897b43bf8008e211206a23b08c1400a1 161 Pfam PF02169 LPP20 lipoprotein 47 138 1.5E-11 T 11-10-2018 IPR024952 Lipoprotein LPP20-like AVL55_04820 897b43bf8008e211206a23b08c1400a1 161 PIRSF PIRSF028687 8 161 3.0E-45 T 11-10-2018 IPR007293 Flagellar protein FlgP AVL55_04465 df0da2268bf1fc23abba2e82d1d58716 105 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 82 6.5E-17 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AVL55_04465 df0da2268bf1fc23abba2e82d1d58716 105 SUPERFAMILY SSF160544 7 86 2.88E-20 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AVL55_04465 df0da2268bf1fc23abba2e82d1d58716 105 Gene3D G3DSA:3.40.1690.10 7 90 4.4E-22 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AVL55_10085 1f60f58f409cbb71e34b550ff174f760 491 Pfam PF03553 Na+/H+ antiporter family 166 473 8.1E-58 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AVL55_10085 1f60f58f409cbb71e34b550ff174f760 491 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 8 476 8.5E-135 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AVL55_14390 331362392be0182432f0e0568e642963 262 SUPERFAMILY SSF53474 9 225 4.55E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_14390 331362392be0182432f0e0568e642963 262 Pfam PF01764 Lipase (class 3) 60 204 3.5E-20 T 11-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AVL55_14390 331362392be0182432f0e0568e642963 262 Gene3D G3DSA:3.40.50.1820 4 246 1.5E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_12820 715529e7ad5b24d9c8df9d6d5f35f62f 221 Gene3D G3DSA:1.10.357.10 1 212 1.3E-39 T 11-10-2018 AVL55_12820 715529e7ad5b24d9c8df9d6d5f35f62f 221 SUPERFAMILY SSF46689 3 65 5.13E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_12820 715529e7ad5b24d9c8df9d6d5f35f62f 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 2.7E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_12820 715529e7ad5b24d9c8df9d6d5f35f62f 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_12820 715529e7ad5b24d9c8df9d6d5f35f62f 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AVL55_12820 715529e7ad5b24d9c8df9d6d5f35f62f 221 Pfam PF13972 Bacterial transcriptional repressor 57 190 4.8E-18 T 11-10-2018 IPR025722 Bacterial transcriptional repressor TetR AVL55_19455 80d9b431dbcb8e837891c1b4b1cb2387 167 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 9 115 1.1E-16 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 AVL55_19455 80d9b431dbcb8e837891c1b4b1cb2387 167 Pfam PF09523 Protein of unknown function (DUF2390) 11 112 2.7E-21 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 AVL55_08445 2218cd60ff0696e9bf5c5ef8454ed7f0 551 Pfam PF03961 Flagellar Assembly Protein A 83 544 2.2E-114 T 11-10-2018 IPR005646 Flagellar assembly protein A AVL55_03165 2097de17c8dec36db79e381b53a63888 278 SUPERFAMILY SSF109604 11 260 3.24E-48 T 11-10-2018 AVL55_03165 2097de17c8dec36db79e381b53a63888 278 Pfam PF08668 HDOD domain 22 208 6.0E-35 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AVL55_03165 2097de17c8dec36db79e381b53a63888 278 Gene3D G3DSA:1.10.3210.10 1 277 1.4E-55 T 11-10-2018 AVL55_12630 fd688b1ae9e3bd6a7036331ef03fff31 194 Pfam PF13358 DDE superfamily endonuclease 25 163 2.8E-27 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain AVL55_12630 fd688b1ae9e3bd6a7036331ef03fff31 194 Gene3D G3DSA:3.30.420.470 17 190 3.7E-13 T 11-10-2018 AVL55_05225 83c61c2e48cf1ada31c5b2d543f774b5 376 Gene3D G3DSA:3.40.50.2300 3 131 3.0E-30 T 11-10-2018 AVL55_05225 83c61c2e48cf1ada31c5b2d543f774b5 376 Pfam PF00072 Response regulator receiver domain 5 109 5.6E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_05225 83c61c2e48cf1ada31c5b2d543f774b5 376 SUPERFAMILY SSF52172 3 109 1.37E-25 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_05225 83c61c2e48cf1ada31c5b2d543f774b5 376 SUPERFAMILY SSF52738 185 372 3.14E-60 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AVL55_05225 83c61c2e48cf1ada31c5b2d543f774b5 376 Gene3D G3DSA:3.40.50.180 183 373 5.9E-63 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AVL55_05225 83c61c2e48cf1ada31c5b2d543f774b5 376 Pfam PF01339 CheB methylesterase 191 370 3.2E-58 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AVL55_05225 83c61c2e48cf1ada31c5b2d543f774b5 376 SMART SM00448 3 126 5.0E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_05225 83c61c2e48cf1ada31c5b2d543f774b5 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 376 37.305 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AVL55_05225 83c61c2e48cf1ada31c5b2d543f774b5 376 PIRSF PIRSF000876 1 376 7.3E-125 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AVL55_16800 994a0c82b532e7dbfccdf3d1d31040b8 284 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 28 227 5.2E-11 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AVL55_14980 5f8e581e2f6cb4107131f91885f0b9fb 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AVL55_14980 5f8e581e2f6cb4107131f91885f0b9fb 129 Gene3D G3DSA:2.40.50.100 2 129 3.8E-51 T 11-10-2018 AVL55_14980 5f8e581e2f6cb4107131f91885f0b9fb 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 128 5.6E-55 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AVL55_14980 5f8e581e2f6cb4107131f91885f0b9fb 129 SUPERFAMILY SSF51230 3 128 4.94E-47 T 11-10-2018 IPR011053 Single hybrid motif AVL55_14980 5f8e581e2f6cb4107131f91885f0b9fb 129 Pfam PF01597 Glycine cleavage H-protein 8 128 2.6E-47 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AVL55_14980 5f8e581e2f6cb4107131f91885f0b9fb 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.703 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AVL55_02325 14024f7410c7be2849f80edc417357a8 657 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 100 390 4.8E-78 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AVL55_02325 14024f7410c7be2849f80edc417357a8 657 Gene3D G3DSA:3.40.50.1700 456 657 3.6E-13 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AVL55_02325 14024f7410c7be2849f80edc417357a8 657 Gene3D G3DSA:3.20.20.300 60 432 1.1E-101 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AVL55_02325 14024f7410c7be2849f80edc417357a8 657 SUPERFAMILY SSF51445 96 423 1.9E-69 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AVL55_02325 14024f7410c7be2849f80edc417357a8 657 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 334 351 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AVL55_08215 126ebeeaa2c127af55d2505908a084a5 845 SUPERFAMILY SSF51126 283 613 6.83E-17 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AVL55_08215 126ebeeaa2c127af55d2505908a084a5 845 SMART SM00710 428 475 5300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_08215 126ebeeaa2c127af55d2505908a084a5 845 SMART SM00710 316 338 550.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_08215 126ebeeaa2c127af55d2505908a084a5 845 SMART SM00710 339 361 210.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_08215 126ebeeaa2c127af55d2505908a084a5 845 SMART SM00710 487 508 1100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AVL55_08215 126ebeeaa2c127af55d2505908a084a5 845 Gene3D G3DSA:2.160.20.10 215 646 7.0E-6 T 11-10-2018 IPR012334 Pectin lyase fold AVL55_07290 a6f41d53e32a52b652f4f5a7646e5904 285 SMART SM00481 3 70 1.5E-16 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AVL55_07290 a6f41d53e32a52b652f4f5a7646e5904 285 SUPERFAMILY SSF89550 2 278 5.49E-49 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AVL55_07290 a6f41d53e32a52b652f4f5a7646e5904 285 Pfam PF02811 PHP domain 4 103 4.8E-10 T 11-10-2018 IPR004013 PHP domain GO:0003824 AVL55_07290 a6f41d53e32a52b652f4f5a7646e5904 285 Gene3D G3DSA:1.10.150.650 98 169 6.3E-79 T 11-10-2018 AVL55_07290 a6f41d53e32a52b652f4f5a7646e5904 285 Gene3D G3DSA:3.20.20.140 3 250 6.3E-79 T 11-10-2018 AVL55_13340 44222b904d8366527f4e167cea511e58 157 SUPERFAMILY SSF52121 4 153 1.96E-60 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13340 44222b904d8366527f4e167cea511e58 157 Gene3D G3DSA:3.40.50.960 1 156 2.0E-63 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13340 44222b904d8366527f4e167cea511e58 157 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.2E-55 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13340 44222b904d8366527f4e167cea511e58 157 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.566 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_13340 44222b904d8366527f4e167cea511e58 157 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 3.3E-58 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AVL55_04040 5392d6653e5026d268a4f5b9c2a4494e 175 Gene3D G3DSA:3.90.190.10 12 164 6.1E-13 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AVL55_04040 5392d6653e5026d268a4f5b9c2a4494e 175 SUPERFAMILY SSF52799 23 151 3.26E-12 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AVL55_00705 a98a5ecdc2ed9b3e967c0507e3398c3b 239 Gene3D G3DSA:1.10.287.110 172 238 1.8E-11 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AVL55_00705 a98a5ecdc2ed9b3e967c0507e3398c3b 239 Pfam PF12339 DNA-J related protein 18 167 1.3E-35 T 11-10-2018 IPR021059 DnaJ-related protein, N-terminal AVL55_00705 a98a5ecdc2ed9b3e967c0507e3398c3b 239 SUPERFAMILY SSF46565 176 233 7.98E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AVL55_01165 0a40f0cc6428cf6813e1aa5bc379efee 90 SUPERFAMILY SSF111148 1 89 2.62E-40 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AVL55_01165 0a40f0cc6428cf6813e1aa5bc379efee 90 Gene3D G3DSA:1.10.3880.10 1 90 2.6E-39 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AVL55_01165 0a40f0cc6428cf6813e1aa5bc379efee 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.541 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AVL55_01165 0a40f0cc6428cf6813e1aa5bc379efee 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-32 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AVL55_01165 0a40f0cc6428cf6813e1aa5bc379efee 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 4.0E-43 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AVL55_01165 0a40f0cc6428cf6813e1aa5bc379efee 90 PIRSF PIRSF029827 1 90 9.3E-44 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AVL55_00755 b632692cbdaa9ced50362ecdb8eb50f1 480 Pfam PF11737 Protein of unknown function (DUF3300) 39 270 3.7E-77 T 11-10-2018 IPR021728 Protein of unknown function DUF3300 AVL55_02145 1de74ed75ae66f42e624ed6e25620c95 130 Pfam PF04219 Protein of unknown function, DUF 19 104 4.5E-30 T 11-10-2018 IPR007335 Protein of unknown function DUF413 AVL55_18800 506fa1c97b47f841c8866ec94cf852ef 63 Pfam PF05532 CsbD-like 4 56 1.1E-21 T 11-10-2018 IPR008462 CsbD-like domain AVL55_18800 506fa1c97b47f841c8866ec94cf852ef 63 SUPERFAMILY SSF69047 1 62 4.45E-25 T 11-10-2018 IPR036629 YjbJ superfamily AVL55_18800 506fa1c97b47f841c8866ec94cf852ef 63 PIRSF PIRSF039008 1 63 4.4E-31 T 11-10-2018 IPR026042 Stress response protein YjbJ AVL55_18800 506fa1c97b47f841c8866ec94cf852ef 63 Gene3D G3DSA:1.10.1470.10 1 63 6.6E-31 T 11-10-2018 IPR036629 YjbJ superfamily AVL55_10355 46ae3150c7fc0b585d24916b6f2406d6 290 Gene3D G3DSA:3.30.70.270 108 288 2.0E-40 T 11-10-2018 AVL55_10355 46ae3150c7fc0b585d24916b6f2406d6 290 SMART SM00267 104 286 2.5E-25 T 11-10-2018 IPR000160 GGDEF domain AVL55_10355 46ae3150c7fc0b585d24916b6f2406d6 290 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 113 222 3.9E-23 T 11-10-2018 IPR000160 GGDEF domain AVL55_10355 46ae3150c7fc0b585d24916b6f2406d6 290 SUPERFAMILY SSF55073 119 286 1.02E-31 T 11-10-2018 IPR029787 Nucleotide cyclase AVL55_10355 46ae3150c7fc0b585d24916b6f2406d6 290 Pfam PF00990 Diguanylate cyclase, GGDEF domain 114 282 2.2E-26 T 11-10-2018 IPR000160 GGDEF domain AVL55_01305 5a0d9efc15b79227afa29aecd8444891 292 Pfam PF01545 Cation efflux family 15 197 1.7E-39 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AVL55_01305 5a0d9efc15b79227afa29aecd8444891 292 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 279 8.7E-53 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AVL55_01305 5a0d9efc15b79227afa29aecd8444891 292 SUPERFAMILY SSF161111 7 202 7.85E-46 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_01305 5a0d9efc15b79227afa29aecd8444891 292 Gene3D G3DSA:1.20.1510.10 10 200 1.3E-38 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_19935 171cd19be079b476f3a257bf48369a9c 535 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 85 - T 11-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 AVL55_19935 171cd19be079b476f3a257bf48369a9c 535 Pfam PF13347 MFS/sugar transport protein 272 513 1.4E-39 T 11-10-2018 AVL55_19935 171cd19be079b476f3a257bf48369a9c 535 Pfam PF13347 MFS/sugar transport protein 12 217 1.2E-58 T 11-10-2018 AVL55_19935 171cd19be079b476f3a257bf48369a9c 535 SUPERFAMILY SSF103473 17 511 2.22E-34 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_19935 171cd19be079b476f3a257bf48369a9c 535 Gene3D G3DSA:1.20.1250.20 11 211 1.7E-12 T 11-10-2018 AVL55_19935 171cd19be079b476f3a257bf48369a9c 535 Gene3D G3DSA:1.20.1250.20 305 523 1.3E-11 T 11-10-2018 AVL55_05930 302c9d34cc984cdaa7e3b02b53657ac9 103 SUPERFAMILY SSF82866 18 102 1.15E-14 T 11-10-2018 AVL55_05930 302c9d34cc984cdaa7e3b02b53657ac9 103 Gene3D G3DSA:1.20.1640.10 54 103 1.7E-24 T 11-10-2018 AVL55_05930 302c9d34cc984cdaa7e3b02b53657ac9 103 Gene3D G3DSA:3.30.70.1440 5 53 1.7E-24 T 11-10-2018 AVL55_05930 302c9d34cc984cdaa7e3b02b53657ac9 103 Pfam PF00873 AcrB/AcrD/AcrF family 1 103 2.9E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AVL55_00745 bbc301b4bad9837f28070c169711b21a 493 Gene3D G3DSA:1.10.287.950 171 493 1.2E-51 T 11-10-2018 AVL55_00745 bbc301b4bad9837f28070c169711b21a 493 SMART SM00283 231 492 1.9E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_00745 bbc301b4bad9837f28070c169711b21a 493 SUPERFAMILY SSF58104 212 493 3.53E-56 T 11-10-2018 AVL55_00745 bbc301b4bad9837f28070c169711b21a 493 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 458 8.3E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_13965 6cad4f4e7b07e442660c808190930532 531 PIRSF PIRSF001362 414 530 7.8E-7 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AVL55_13965 6cad4f4e7b07e442660c808190930532 531 PIRSF PIRSF001362 1 278 6.2E-30 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AVL55_13965 6cad4f4e7b07e442660c808190930532 531 PIRSF PIRSF001362 289 410 2.2E-13 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AVL55_13965 6cad4f4e7b07e442660c808190930532 531 Gene3D G3DSA:3.20.20.60 411 530 2.3E-20 T 11-10-2018 AVL55_13965 6cad4f4e7b07e442660c808190930532 531 SUPERFAMILY SSF51621 11 513 8.52E-126 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AVL55_13965 6cad4f4e7b07e442660c808190930532 531 Pfam PF00463 Isocitrate lyase family 316 389 2.4E-10 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AVL55_13965 6cad4f4e7b07e442660c808190930532 531 Pfam PF00463 Isocitrate lyase family 97 268 1.6E-20 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AVL55_13965 6cad4f4e7b07e442660c808190930532 531 Pfam PF00463 Isocitrate lyase family 431 529 1.6E-11 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AVL55_15660 e64e101b250caa967c35be6819ea291a 278 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 226 35.962 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AVL55_15660 e64e101b250caa967c35be6819ea291a 278 Gene3D G3DSA:3.30.950.10 114 233 5.6E-37 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AVL55_15660 e64e101b250caa967c35be6819ea291a 278 SUPERFAMILY SSF53790 6 224 6.15E-78 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AVL55_15660 e64e101b250caa967c35be6819ea291a 278 Gene3D G3DSA:3.40.1010.10 1 113 3.3E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AVL55_15660 e64e101b250caa967c35be6819ea291a 278 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 AVL55_15660 e64e101b250caa967c35be6819ea291a 278 PIRSF PIRSF005917 1 278 4.0E-99 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AVL55_15660 e64e101b250caa967c35be6819ea291a 278 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 274 1.2E-85 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AVL55_15660 e64e101b250caa967c35be6819ea291a 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 204 1.1E-27 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AVL55_12775 7aef89ace297505eed3f7563c3f56399 141 Pfam PF01643 Acyl-ACP thioesterase 33 134 2.9E-8 T 11-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 AVL55_12775 7aef89ace297505eed3f7563c3f56399 141 SUPERFAMILY SSF54637 2 137 2.49E-32 T 11-10-2018 IPR029069 HotDog domain superfamily AVL55_12775 7aef89ace297505eed3f7563c3f56399 141 Gene3D G3DSA:3.10.129.10 1 134 2.1E-29 T 11-10-2018 AVL55_12350 718da0bef04c233f7a2718ac200b0062 298 Gene3D G3DSA:1.20.1510.10 122 296 4.9E-10 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_12350 718da0bef04c233f7a2718ac200b0062 298 SUPERFAMILY SSF161111 118 294 3.01E-30 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AVL55_12350 718da0bef04c233f7a2718ac200b0062 298 SUPERFAMILY SSF55008 33 95 1.57E-8 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_12350 718da0bef04c233f7a2718ac200b0062 298 Pfam PF01545 Cation efflux family 127 294 1.6E-10 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 Gene3D G3DSA:4.10.640.10 20 75 6.2E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 4.2E-37 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.505 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 Pfam PF01084 Ribosomal protein S18 19 68 1.0E-25 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 72 1.0E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_18655 f5e5489255dc0c3d92845d51db0f0d98 75 SUPERFAMILY SSF46911 3 74 5.23E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AVL55_01095 a75ebbed7eb95b49508f0505a12636a3 272 SUPERFAMILY SSF56317 2 264 2.75E-69 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AVL55_01095 a75ebbed7eb95b49508f0505a12636a3 272 Gene3D G3DSA:3.60.110.10 1 270 1.2E-80 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AVL55_01095 a75ebbed7eb95b49508f0505a12636a3 272 Pfam PF00795 Carbon-nitrogen hydrolase 7 256 1.5E-47 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AVL55_01095 a75ebbed7eb95b49508f0505a12636a3 272 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 152 172 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AVL55_17005 42360a3db4602745e63e286f51ec7406 153 Gene3D G3DSA:3.40.50.300 1 149 1.3E-43 T 11-10-2018 AVL55_17005 42360a3db4602745e63e286f51ec7406 153 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 2 144 3.1E-41 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AVL55_17005 42360a3db4602745e63e286f51ec7406 153 SUPERFAMILY SSF52540 1 149 1.57E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17005 42360a3db4602745e63e286f51ec7406 153 Pfam PF01202 Shikimate kinase 2 136 9.6E-10 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AVL55_05840 7702809891b052a4a415af387b894b88 208 Pfam PF05309 TraE protein 2 177 1.8E-30 T 11-10-2018 IPR007973 Pilus assembly TraE GO:0000746 AVL55_11520 4d7756ca20fb7fa092f766ab20279bab 174 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.7E-70 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AVL55_11520 4d7756ca20fb7fa092f766ab20279bab 174 PIRSF PIRSF038996 1 172 1.1E-66 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AVL55_11520 4d7756ca20fb7fa092f766ab20279bab 174 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AVL55_11520 4d7756ca20fb7fa092f766ab20279bab 174 Pfam PF00258 Flavodoxin 6 160 1.1E-29 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AVL55_11520 4d7756ca20fb7fa092f766ab20279bab 174 Gene3D G3DSA:3.40.50.360 3 174 1.3E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_11520 4d7756ca20fb7fa092f766ab20279bab 174 SUPERFAMILY SSF52218 4 170 1.76E-51 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_02605 f415356ed0f213960d516e144c56d295 192 Pfam PF09335 SNARE associated Golgi protein 38 157 2.0E-14 T 11-10-2018 IPR032816 SNARE associated Golgi protein AVL55_01775 494a958dd6b94ecac0c04329695857f6 350 SUPERFAMILY SSF51430 1 347 8.9E-91 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_01775 494a958dd6b94ecac0c04329695857f6 350 Gene3D G3DSA:3.20.20.100 1 348 3.1E-107 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_01775 494a958dd6b94ecac0c04329695857f6 350 Pfam PF00248 Aldo/keto reductase family 16 340 1.4E-60 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AVL55_14855 0b077c367c3531be7f5ee8ee1a11a982 281 Gene3D G3DSA:3.40.1010.10 1 132 6.5E-18 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AVL55_14855 0b077c367c3531be7f5ee8ee1a11a982 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 222 3.6E-24 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AVL55_14855 0b077c367c3531be7f5ee8ee1a11a982 281 SUPERFAMILY SSF53790 8 249 3.93E-27 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AVL55_08600 01719b7ba05ddf7839082a2bbd79036b 212 SUPERFAMILY SSF53448 8 208 1.15E-23 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_08600 01719b7ba05ddf7839082a2bbd79036b 212 Pfam PF12804 MobA-like NTP transferase domain 10 157 1.4E-24 T 11-10-2018 IPR025877 MobA-like NTP transferase AVL55_08600 01719b7ba05ddf7839082a2bbd79036b 212 Gene3D G3DSA:3.90.550.10 11 212 5.0E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_11175 f2b468fe043b4e770dfbbcc73ad60a6e 321 SUPERFAMILY SSF56349 131 315 1.09E-31 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_11175 f2b468fe043b4e770dfbbcc73ad60a6e 321 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 36 100 1.3E-6 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AVL55_11175 f2b468fe043b4e770dfbbcc73ad60a6e 321 Gene3D G3DSA:1.10.150.130 23 127 3.2E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AVL55_11175 f2b468fe043b4e770dfbbcc73ad60a6e 321 Pfam PF00589 Phage integrase family 142 308 1.8E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_11175 f2b468fe043b4e770dfbbcc73ad60a6e 321 SUPERFAMILY SSF47823 35 112 2.16E-12 T 11-10-2018 AVL55_11175 f2b468fe043b4e770dfbbcc73ad60a6e 321 Gene3D G3DSA:1.10.443.10 132 312 2.8E-36 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_19700 aac787ddf1ee65a2bf2269129b6bf68e 300 SUPERFAMILY SSF103481 190 285 1.1E-8 T 11-10-2018 AVL55_19700 aac787ddf1ee65a2bf2269129b6bf68e 300 Pfam PF00892 EamA-like transporter family 151 283 1.4E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_19700 aac787ddf1ee65a2bf2269129b6bf68e 300 Pfam PF00892 EamA-like transporter family 6 135 1.4E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_19700 aac787ddf1ee65a2bf2269129b6bf68e 300 SUPERFAMILY SSF103481 36 138 4.97E-10 T 11-10-2018 AVL55_19225 29b3f35246b9395cb3384f5906dea88e 97 SUPERFAMILY SSF57652 34 95 4.32E-19 T 11-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 AVL55_19225 29b3f35246b9395cb3384f5906dea88e 97 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 26 1.0E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AVL55_19225 29b3f35246b9395cb3384f5906dea88e 97 Gene3D G3DSA:4.10.490.10 32 95 7.6E-17 T 11-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 AVL55_19225 29b3f35246b9395cb3384f5906dea88e 97 Pfam PF01355 High potential iron-sulfur protein 38 93 3.0E-15 T 11-10-2018 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 AVL55_14470 1655334fe75eaf144764faef1bde6205 339 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 4.2E-101 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis AVL55_14470 1655334fe75eaf144764faef1bde6205 339 SUPERFAMILY SSF52540 9 241 1.78E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_14470 1655334fe75eaf144764faef1bde6205 339 Gene3D G3DSA:1.10.1580.10 174 266 1.5E-22 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily AVL55_14470 1655334fe75eaf144764faef1bde6205 339 PIRSF PIRSF006230 278 338 910.0 T 11-10-2018 IPR016478 GTPase, MTG1 AVL55_14470 1655334fe75eaf144764faef1bde6205 339 PIRSF PIRSF006230 1 277 1.1E-98 T 11-10-2018 IPR016478 GTPase, MTG1 AVL55_14470 1655334fe75eaf144764faef1bde6205 339 Gene3D G3DSA:3.40.50.300 3 171 3.1E-41 T 11-10-2018 AVL55_14470 1655334fe75eaf144764faef1bde6205 339 Pfam PF01926 50S ribosome-binding GTPase 117 175 6.7E-13 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AVL55_13095 7e248cf938225fa645647aa43459e837 315 SUPERFAMILY SSF63829 15 276 6.15E-5 T 11-10-2018 AVL55_02305 1a57bceb024f4d29b13e99175b7a757b 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 3.6E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AVL55_02305 1a57bceb024f4d29b13e99175b7a757b 138 Gene3D G3DSA:3.10.180.10 1 134 8.9E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_02305 1a57bceb024f4d29b13e99175b7a757b 138 SUPERFAMILY SSF54593 5 130 1.41E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_13995 ea5894bcdcd3e32d5aab0bfba0369fc2 302 SUPERFAMILY SSF53795 115 219 1.4E-13 T 11-10-2018 AVL55_13995 ea5894bcdcd3e32d5aab0bfba0369fc2 302 TIGRFAM TIGR04352 HprK_rel_A: HprK-related kinase A 21 297 4.4E-99 T 11-10-2018 IPR027600 HprK-related kinase A AVL55_17360 db358793c4751a87a401114e886f5aec 531 Gene3D G3DSA:3.20.20.70 1 310 1.6E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_17360 db358793c4751a87a401114e886f5aec 531 Pfam PF00682 HMGL-like 2 247 1.3E-27 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AVL55_17360 db358793c4751a87a401114e886f5aec 531 SUPERFAMILY SSF51569 2 268 8.06E-44 T 11-10-2018 AVL55_18715 bac479ee7361551a32915a604abe9eaf 35 Pfam PF08173 Membrane bound YbgT-like protein 1 26 7.1E-18 T 11-10-2018 IPR012994 Membrane bound YbgT-like AVL55_18715 bac479ee7361551a32915a604abe9eaf 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 2.2E-20 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AVL55_13785 bc8a52a901469c95d127596d6b64f1f2 372 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 351 73.421 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AVL55_13785 bc8a52a901469c95d127596d6b64f1f2 372 Gene3D G3DSA:1.10.150.530 3 64 1.7E-26 T 11-10-2018 AVL55_13785 bc8a52a901469c95d127596d6b64f1f2 372 Pfam PF04055 Radical SAM superfamily 107 276 6.2E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_13785 bc8a52a901469c95d127596d6b64f1f2 372 Gene3D G3DSA:3.20.20.70 65 336 1.3E-109 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_13785 bc8a52a901469c95d127596d6b64f1f2 372 SUPERFAMILY SSF102114 103 311 4.84E-14 T 11-10-2018 AVL55_13785 bc8a52a901469c95d127596d6b64f1f2 372 PIRSF PIRSF006004 2 365 8.7E-143 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 AVL55_13785 bc8a52a901469c95d127596d6b64f1f2 372 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 355 1.2E-155 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AVL55_03695 4ef2828f0ceb533a9648b45a40e9b9f8 200 SUPERFAMILY SSF52218 1 197 1.37E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_03695 4ef2828f0ceb533a9648b45a40e9b9f8 200 Pfam PF02525 Flavodoxin-like fold 2 195 6.9E-45 T 11-10-2018 IPR003680 Flavodoxin-like fold AVL55_03695 4ef2828f0ceb533a9648b45a40e9b9f8 200 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 198 28.382 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AVL55_03695 4ef2828f0ceb533a9648b45a40e9b9f8 200 Gene3D G3DSA:3.40.50.360 1 199 4.2E-56 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AVL55_12225 cf7ec11f50987bebd47e4ce46fd3c272 189 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 164 186 0.0021 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain AVL55_15345 dc09cb955c26f78b1961ecb915222975 105 Gene3D G3DSA:2.170.150.70 2 103 3.2E-5 T 11-10-2018 AVL55_10275 45c0f7579a1c3e5fabab5632867533e4 320 SUPERFAMILY SSF110849 60 158 6.1E-10 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AVL55_10275 45c0f7579a1c3e5fabab5632867533e4 320 Gene3D G3DSA:1.10.10.2830 143 267 1.3E-7 T 11-10-2018 AVL55_10275 45c0f7579a1c3e5fabab5632867533e4 320 SMART SM00470 60 156 0.0086 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AVL55_10275 45c0f7579a1c3e5fabab5632867533e4 320 SUPERFAMILY SSF109709 149 239 2.75E-7 T 11-10-2018 AVL55_10275 45c0f7579a1c3e5fabab5632867533e4 320 Pfam PF02195 ParB-like nuclease domain 79 155 4.6E-7 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AVL55_04515 a7b24e05ca757e419b97b13f5f929fd5 443 Gene3D G3DSA:1.25.40.10 131 310 1.7E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_04515 a7b24e05ca757e419b97b13f5f929fd5 443 SUPERFAMILY SSF48452 162 262 1.35E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_04515 a7b24e05ca757e419b97b13f5f929fd5 443 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 6 111 2.5E-14 T 11-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AVL55_08050 fc230c6338829cf3b59ca5f47c3c8fc3 421 SUPERFAMILY SSF75304 41 418 2.62E-85 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AVL55_08050 fc230c6338829cf3b59ca5f47c3c8fc3 421 ProSitePatterns PS00571 Amidases signature. 137 168 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AVL55_08050 fc230c6338829cf3b59ca5f47c3c8fc3 421 Gene3D G3DSA:3.90.1300.10 30 421 1.9E-91 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AVL55_08050 fc230c6338829cf3b59ca5f47c3c8fc3 421 Pfam PF01425 Amidase 278 412 1.5E-11 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AVL55_08050 fc230c6338829cf3b59ca5f47c3c8fc3 421 Pfam PF01425 Amidase 35 221 5.2E-50 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AVL55_11950 51204c7c07db2b2db05a15c2dc86167e 116 Pfam PF11042 Protein of unknown function (DUF2750) 18 114 9.0E-30 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 AVL55_05755 f2536a5b5fa95e3be01f69f23c981c8a 361 SUPERFAMILY SSF55874 193 356 7.46E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AVL55_00350 daa0bccd50560a11623f2c87a0a34a9e 83 Pfam PF04380 Membrane fusogenic activity 1 78 3.3E-30 T 11-10-2018 IPR007475 Membrane fusogenic activity AVL55_10930 1df52461493da601067f8d7724a41b7a 106 SUPERFAMILY SSF75169 1 102 1.12E-5 T 11-10-2018 IPR027396 DsrEFH-like AVL55_05390 6e989f63dcc35fde546b8cd05edd65f2 586 PIRSF PIRSF002741 4 582 3.6E-99 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AVL55_05390 6e989f63dcc35fde546b8cd05edd65f2 586 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 502 4.4E-82 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AVL55_05390 6e989f63dcc35fde546b8cd05edd65f2 586 SUPERFAMILY SSF53850 35 582 2.9E-136 T 11-10-2018 AVL55_18385 f817f4640b156a6f09e127095fee3231 234 PIRSF PIRSF000887 22 233 2.1E-42 T 11-10-2018 IPR024173 Phosphoesterase, MJ0037 AVL55_18385 f817f4640b156a6f09e127095fee3231 234 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 22 231 2.8E-61 T 11-10-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated AVL55_18385 f817f4640b156a6f09e127095fee3231 234 Gene3D G3DSA:3.60.21.10 41 142 2.6E-7 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AVL55_18385 f817f4640b156a6f09e127095fee3231 234 Pfam PF00149 Calcineurin-like phosphoesterase 43 150 3.1E-4 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AVL55_18385 f817f4640b156a6f09e127095fee3231 234 SUPERFAMILY SSF56300 43 177 3.8E-10 T 11-10-2018 AVL55_09790 ddb906f36f63accc828f3e0a33e854df 273 SUPERFAMILY SSF51261 62 266 8.11E-50 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_09790 ddb906f36f63accc828f3e0a33e854df 273 Gene3D G3DSA:2.70.70.10 115 269 1.0E-41 T 11-10-2018 IPR011055 Duplicated hybrid motif AVL55_09790 ddb906f36f63accc828f3e0a33e854df 273 Pfam PF01551 Peptidase family M23 169 263 2.0E-28 T 11-10-2018 IPR016047 Peptidase M23 AVL55_19560 b2b3cea3f648b3a4ebf8fc697ee011ed 408 Gene3D G3DSA:3.20.20.370 78 301 7.6E-55 T 11-10-2018 AVL55_19560 b2b3cea3f648b3a4ebf8fc697ee011ed 408 SUPERFAMILY SSF88713 98 339 2.22E-33 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AVL55_19560 b2b3cea3f648b3a4ebf8fc697ee011ed 408 Pfam PF01522 Polysaccharide deacetylase 135 266 1.5E-20 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AVL55_10095 e55fd909bb4347142166633a7dd79771 80 Pfam PF11197 Protein of unknown function (DUF2835) 11 78 6.8E-20 T 11-10-2018 IPR021363 Protein of unknown function DUF2835 AVL55_04090 26bbecd380b845740007c8981078a845 430 Pfam PF12576 Protein of unknown function (DUF3754) 157 310 9.0E-37 T 11-10-2018 IPR022227 Protein of unknown function DUF3754 AVL55_18225 cdb6adbbbe6280e7e047a5f319ff01a5 156 Gene3D G3DSA:1.10.455.10 2 155 1.6E-63 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AVL55_18225 cdb6adbbbe6280e7e047a5f319ff01a5 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AVL55_18225 cdb6adbbbe6280e7e047a5f319ff01a5 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 7.9E-70 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AVL55_18225 cdb6adbbbe6280e7e047a5f319ff01a5 156 PIRSF PIRSF002122 3 156 5.5E-61 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AVL55_18225 cdb6adbbbe6280e7e047a5f319ff01a5 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.0E-65 T 11-10-2018 IPR023798 Ribosomal protein S7 domain AVL55_18225 cdb6adbbbe6280e7e047a5f319ff01a5 156 SUPERFAMILY SSF47973 6 149 1.31E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AVL55_18225 cdb6adbbbe6280e7e047a5f319ff01a5 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.814 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AVL55_09290 573746e84f447da57bc13bd029a58152 274 Gene3D G3DSA:3.20.20.20 4 274 1.8E-111 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_09290 573746e84f447da57bc13bd029a58152 274 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 15 30 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_09290 573746e84f447da57bc13bd029a58152 274 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 14 269 5.7E-105 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AVL55_09290 573746e84f447da57bc13bd029a58152 274 SUPERFAMILY SSF51717 3 271 1.44E-106 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_09290 573746e84f447da57bc13bd029a58152 274 Pfam PF00809 Pterin binding enzyme 16 255 7.1E-89 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AVL55_09625 54b5095607eb0aad1699e41b22e396de 496 PIRSF PIRSF011396 1 496 5.5E-203 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AVL55_09625 54b5095607eb0aad1699e41b22e396de 496 SUPERFAMILY SSF51905 7 421 5.37E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_09625 54b5095607eb0aad1699e41b22e396de 496 Gene3D G3DSA:3.50.50.60 1 495 1.7E-181 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_09625 54b5095607eb0aad1699e41b22e396de 496 Pfam PF04820 Tryptophan halogenase 7 461 3.0E-186 T 11-10-2018 IPR006905 Flavin-dependent halogenase AVL55_16610 50668250faf87c70864d21e4777f1a4e 198 Gene3D G3DSA:2.40.160.20 23 198 3.6E-32 T 11-10-2018 AVL55_16610 50668250faf87c70864d21e4777f1a4e 198 Pfam PF13505 Outer membrane protein beta-barrel domain 18 198 1.8E-24 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AVL55_16610 50668250faf87c70864d21e4777f1a4e 198 SUPERFAMILY SSF56925 34 198 4.45E-32 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AVL55_19750 4db8d9935ac2371d6ea49fd4b73229ea 286 Pfam PF11219 Protein of unknown function (DUF3014) 122 277 5.6E-53 T 11-10-2018 IPR021382 Protein of unknown function DUF3014 AVL55_05265 7df08a1254698bcafa4cbdccb51eedba 196 SUPERFAMILY SSF53335 8 189 2.81E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_05265 7df08a1254698bcafa4cbdccb51eedba 196 Pfam PF06080 Protein of unknown function (DUF938) 5 194 5.3E-55 T 11-10-2018 IPR010342 Protein of unknown function DUF938 AVL55_05265 7df08a1254698bcafa4cbdccb51eedba 196 Gene3D G3DSA:3.40.50.150 2 194 3.0E-12 T 11-10-2018 AVL55_07790 cf3e42d8a0d670e1c605d736d699e1bf 115 Pfam PF03960 ArsC family 6 113 2.2E-17 T 11-10-2018 IPR006660 Arsenate reductase-like AVL55_07790 cf3e42d8a0d670e1c605d736d699e1bf 115 Gene3D G3DSA:3.40.30.10 2 115 3.3E-40 T 11-10-2018 AVL55_07790 cf3e42d8a0d670e1c605d736d699e1bf 115 SUPERFAMILY SSF52833 4 114 1.47E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_07790 cf3e42d8a0d670e1c605d736d699e1bf 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 112 5.1E-30 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR AVL55_09990 090a721796b9e70bdd015913d8cbdf09 190 Gene3D G3DSA:3.90.79.10 5 187 6.1E-50 T 11-10-2018 AVL55_09990 090a721796b9e70bdd015913d8cbdf09 190 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 11-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 AVL55_09990 090a721796b9e70bdd015913d8cbdf09 190 SUPERFAMILY SSF55811 28 181 4.87E-36 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_09990 090a721796b9e70bdd015913d8cbdf09 190 Pfam PF00293 NUDIX domain 29 143 7.4E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AVL55_19045 5688e3abe30109dbf89f2c266df354eb 485 Gene3D G3DSA:3.10.520.20 32 235 9.0E-14 T 11-10-2018 AVL55_19045 5688e3abe30109dbf89f2c266df354eb 485 SUPERFAMILY SSF143631 42 324 5.75E-14 T 11-10-2018 IPR003374 ApbE-like superfamily AVL55_19045 5688e3abe30109dbf89f2c266df354eb 485 Pfam PF02424 ApbE family 42 302 1.8E-12 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AVL55_19045 5688e3abe30109dbf89f2c266df354eb 485 Pfam PF10029 Predicted periplasmic protein (DUF2271) 346 477 2.6E-30 T 11-10-2018 IPR014469 Protein of unknown function DUF2271 AVL55_19920 7bc06dd7630021191b36f1843317e884 557 SUPERFAMILY SSF51905 10 436 1.48E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_19920 7bc06dd7630021191b36f1843317e884 557 PIRSF PIRSF011396 6 514 9.1E-161 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AVL55_19920 7bc06dd7630021191b36f1843317e884 557 Gene3D G3DSA:3.50.50.60 7 513 3.4E-177 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AVL55_19920 7bc06dd7630021191b36f1843317e884 557 Pfam PF04820 Tryptophan halogenase 12 467 1.1E-123 T 11-10-2018 IPR006905 Flavin-dependent halogenase AVL55_11535 37bcfd524420fd51aa9bab76fbbbd0e8 142 SUPERFAMILY SSF46785 3 133 5.34E-44 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_11535 37bcfd524420fd51aa9bab76fbbbd0e8 142 Pfam PF01475 Ferric uptake regulator family 9 129 2.2E-47 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AVL55_11535 37bcfd524420fd51aa9bab76fbbbd0e8 142 Gene3D G3DSA:3.30.1490.190 84 139 6.0E-23 T 11-10-2018 AVL55_11535 37bcfd524420fd51aa9bab76fbbbd0e8 142 Gene3D G3DSA:1.10.10.10 1 83 1.2E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_10005 08a385c76be631e36e8a6bc9b50516d1 429 Pfam PF02646 RmuC family 120 416 4.6E-105 T 11-10-2018 IPR003798 DNA recombination RmuC AVL55_14590 16758be2207990881cf8a254942df0d1 661 Pfam PF12633 Adenylate cyclase NT domain 19 219 4.2E-53 T 11-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AVL55_14590 16758be2207990881cf8a254942df0d1 661 Pfam PF01295 Adenylate cyclase, class-I 248 590 1.4E-56 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AVL55_16390 600e4d0dc17e95b5c2924c0716a23418 409 SUPERFAMILY SSF56935 29 409 6.72E-19 T 11-10-2018 AVL55_08780 0a74a44db889a5e7c2ca90fcbd35ab77 132 Pfam PF12514 Protein of unknown function (DUF3718) 34 101 7.3E-23 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 AVL55_01475 aa3a2d0c4edbbeac70ffb311eecfd060 317 SUPERFAMILY SSF51658 71 287 2.63E-41 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AVL55_01475 aa3a2d0c4edbbeac70ffb311eecfd060 317 Gene3D G3DSA:3.20.20.150 52 313 1.3E-71 T 11-10-2018 AVL55_01475 aa3a2d0c4edbbeac70ffb311eecfd060 317 Pfam PF01261 Xylose isomerase-like TIM barrel 90 271 4.3E-18 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AVL55_05720 291ab13aee8d8a36f49c7f64fb8a3795 301 Gene3D G3DSA:3.30.420.10 46 214 1.7E-29 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_05720 291ab13aee8d8a36f49c7f64fb8a3795 301 SUPERFAMILY SSF53098 48 221 3.45E-40 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_05720 291ab13aee8d8a36f49c7f64fb8a3795 301 SMART SM00479 51 217 1.4E-11 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_05720 291ab13aee8d8a36f49c7f64fb8a3795 301 Pfam PF00929 Exonuclease 53 207 9.2E-13 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_07345 c155b04cf9eae492a1597e1ff3b8b447 561 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 556 5.2E-166 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AVL55_07345 c155b04cf9eae492a1597e1ff3b8b447 561 Gene3D G3DSA:3.40.50.300 270 557 9.7E-51 T 11-10-2018 AVL55_07345 c155b04cf9eae492a1597e1ff3b8b447 561 Gene3D G3DSA:3.40.50.300 1 267 1.1E-43 T 11-10-2018 AVL55_07345 c155b04cf9eae492a1597e1ff3b8b447 561 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 516 6.1E-23 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AVL55_07345 c155b04cf9eae492a1597e1ff3b8b447 561 SUPERFAMILY SSF52540 1 220 3.7E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07345 c155b04cf9eae492a1597e1ff3b8b447 561 PIRSF PIRSF003128 1 561 2.2E-151 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AVL55_07345 c155b04cf9eae492a1597e1ff3b8b447 561 SUPERFAMILY SSF52540 4 507 2.3E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17685 155b7b71fc320c8e3a09f1c7dd0846a5 542 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 443 7.8E-174 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AVL55_17685 155b7b71fc320c8e3a09f1c7dd0846a5 542 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 538 52.443 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AVL55_17685 155b7b71fc320c8e3a09f1c7dd0846a5 542 Pfam PF03109 ABC1 family 114 229 5.6E-33 T 11-10-2018 IPR004147 UbiB domain AVL55_17685 155b7b71fc320c8e3a09f1c7dd0846a5 542 SUPERFAMILY SSF56112 91 435 4.02E-50 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_11055 ed21aa80e05ed424faf4e788bfae5ede 376 SUPERFAMILY SSF47240 3 340 4.72E-104 T 11-10-2018 IPR009078 Ferritin-like superfamily AVL55_11055 ed21aa80e05ed424faf4e788bfae5ede 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 3.0E-45 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AVL55_11055 ed21aa80e05ed424faf4e788bfae5ede 376 Gene3D G3DSA:1.10.620.20 2 340 9.4E-136 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AVL55_01400 92b726a014ab5ffdc95a8c0b1a9e3959 112 Pfam PF11666 Protein of unknown function (DUF2933) 19 68 1.8E-20 T 11-10-2018 IPR021682 Protein of unknown function DUF2933 AVL55_06990 7bd9e8a08d75ceff34e73ffd1a834535 351 Pfam PF04403 Paraquat-inducible protein A 19 166 3.6E-35 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AVL55_06990 7bd9e8a08d75ceff34e73ffd1a834535 351 Pfam PF04403 Paraquat-inducible protein A 191 347 1.0E-57 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AVL55_05060 98ca07b241d3c11d9eb8ff7b2a84c742 306 Pfam PF13469 Sulfotransferase family 52 287 1.9E-9 T 11-10-2018 AVL55_05060 98ca07b241d3c11d9eb8ff7b2a84c742 306 SUPERFAMILY SSF52540 50 289 5.82E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05060 98ca07b241d3c11d9eb8ff7b2a84c742 306 Gene3D G3DSA:3.40.50.300 8 290 6.4E-16 T 11-10-2018 AVL55_11860 89dcddc34f73fc47e7a47382a6825700 205 Gene3D G3DSA:3.10.450.50 146 205 2.8E-7 T 11-10-2018 AVL55_11860 89dcddc34f73fc47e7a47382a6825700 205 SUPERFAMILY SSF103642 186 205 8.01E-5 T 11-10-2018 AVL55_02935 7d0bd3d35d74307a2f90b4278c2a95b1 214 Pfam PF06042 Nucleotidyltransferase 23 210 1.7E-51 T 11-10-2018 IPR009267 Putative nucleotidyltransferase AVL55_14325 d8f626fb23e1e962d654c1c51e892a0c 287 SUPERFAMILY SSF103481 176 276 3.53E-5 T 11-10-2018 AVL55_02690 b0af1f2562837b1fa5d836945c9a224b 270 Gene3D G3DSA:2.30.30.40 110 162 1.3E-8 T 11-10-2018 AVL55_02690 b0af1f2562837b1fa5d836945c9a224b 270 Pfam PF08239 Bacterial SH3 domain 112 162 5.7E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AVL55_02690 b0af1f2562837b1fa5d836945c9a224b 270 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 103 269 1.3E-49 T 11-10-2018 IPR016476 SH3 domain protein AVL55_02690 b0af1f2562837b1fa5d836945c9a224b 270 SMART SM00287 99 165 4.8E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AVL55_09210 13ffd66088f7413b228133bf26003a77 371 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 369 27.671 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_09210 13ffd66088f7413b228133bf26003a77 371 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 366 2.9E-132 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_09210 13ffd66088f7413b228133bf26003a77 371 Pfam PF01098 Cell cycle protein 23 367 5.3E-105 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AVL55_14225 219c8815f7b226ecda6bd5e0480472a7 129 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 46 126 1.2E-30 T 11-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AVL55_14225 219c8815f7b226ecda6bd5e0480472a7 129 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 61 125 1.1E-15 T 11-10-2018 IPR008792 Coenzyme PQQ synthesis D AVL55_14225 219c8815f7b226ecda6bd5e0480472a7 129 Gene3D G3DSA:1.10.10.1150 38 127 8.0E-22 T 11-10-2018 AVL55_00820 0cbf15977246cd5e1f20616a2fc1554f 246 Gene3D G3DSA:1.20.120.1600 24 118 3.7E-50 T 11-10-2018 AVL55_00820 0cbf15977246cd5e1f20616a2fc1554f 246 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 214 4.0E-13 T 11-10-2018 AVL55_00820 0cbf15977246cd5e1f20616a2fc1554f 246 Gene3D G3DSA:3.40.50.1000 12 238 3.7E-50 T 11-10-2018 IPR023214 HAD superfamily AVL55_00820 0cbf15977246cd5e1f20616a2fc1554f 246 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 121 209 3.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_00820 0cbf15977246cd5e1f20616a2fc1554f 246 SUPERFAMILY SSF56784 10 246 3.53E-32 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_15180 a5c55a196c2d3d9bc4c6f5842f7aa079 75 Gene3D G3DSA:3.30.50.10 1 60 9.1E-22 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 AVL55_15180 a5c55a196c2d3d9bc4c6f5842f7aa079 75 SUPERFAMILY SSF57716 2 52 5.42E-19 T 11-10-2018 AVL55_15180 a5c55a196c2d3d9bc4c6f5842f7aa079 75 Pfam PF03884 DNA gyrase inhibitor YacG 3 51 1.8E-23 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AVL55_15180 a5c55a196c2d3d9bc4c6f5842f7aa079 75 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 56 15.925 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AVL55_15765 728e0374919189f6db4553d59f6cda3c 568 Pfam PF03703 Bacterial PH domain 480 554 8.8E-6 T 11-10-2018 IPR005182 Domain of unknown function DUF304 AVL55_15765 728e0374919189f6db4553d59f6cda3c 568 Pfam PF03703 Bacterial PH domain 115 190 2.9E-17 T 11-10-2018 IPR005182 Domain of unknown function DUF304 AVL55_15765 728e0374919189f6db4553d59f6cda3c 568 PIRSF PIRSF026631 58 568 6.0E-56 T 11-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 AVL55_05655 dd5d7bbf435f9cc003c7cc58a244af38 145 Gene3D G3DSA:1.10.1660.10 34 145 4.5E-14 T 11-10-2018 AVL55_05655 dd5d7bbf435f9cc003c7cc58a244af38 145 Pfam PF13411 MerR HTH family regulatory protein 39 104 4.3E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05655 dd5d7bbf435f9cc003c7cc58a244af38 145 SUPERFAMILY SSF46955 38 139 1.39E-13 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_05655 dd5d7bbf435f9cc003c7cc58a244af38 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 50 63 1.7E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05655 dd5d7bbf435f9cc003c7cc58a244af38 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 74 94 1.7E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05655 dd5d7bbf435f9cc003c7cc58a244af38 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_05655 dd5d7bbf435f9cc003c7cc58a244af38 145 SMART SM00422 38 107 1.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_18100 1fdb0a79dc128f9c2e742f2c1a1d3b0d 206 Gene3D G3DSA:3.30.1150.10 110 203 1.5E-9 T 11-10-2018 AVL55_18100 1fdb0a79dc128f9c2e742f2c1a1d3b0d 206 SUPERFAMILY SSF74653 123 203 2.75E-6 T 11-10-2018 AVL55_18100 1fdb0a79dc128f9c2e742f2c1a1d3b0d 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 199 3.2E-5 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AVL55_15505 79bf6d64737059f709dc2c0232b78389 319 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AVL55_15505 79bf6d64737059f709dc2c0232b78389 319 Gene3D G3DSA:3.20.20.70 2 317 2.8E-143 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_15505 79bf6d64737059f709dc2c0232b78389 319 Hamap MF_00492 Transaldolase [tal]. 2 317 51.746 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AVL55_15505 79bf6d64737059f709dc2c0232b78389 319 TIGRFAM TIGR00874 talAB: transaldolase 3 317 7.6E-157 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AVL55_15505 79bf6d64737059f709dc2c0232b78389 319 SUPERFAMILY SSF51569 1 317 6.59E-119 T 11-10-2018 AVL55_15505 79bf6d64737059f709dc2c0232b78389 319 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 2.6E-105 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AVL55_15505 79bf6d64737059f709dc2c0232b78389 319 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AVL55_06720 15c22e97331883e92b276cbc323504ce 362 PIRSF PIRSF001361 1 354 1.2E-154 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AVL55_06720 15c22e97331883e92b276cbc323504ce 362 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 347 5.5E-151 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AVL55_06720 15c22e97331883e92b276cbc323504ce 362 SUPERFAMILY SSF51569 9 346 1.92E-133 T 11-10-2018 AVL55_06720 15c22e97331883e92b276cbc323504ce 362 Pfam PF00793 DAHP synthetase I family 41 340 2.1E-98 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AVL55_06720 15c22e97331883e92b276cbc323504ce 362 Gene3D G3DSA:3.20.20.70 3 350 2.3E-150 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_11545 363844cd96aebc37d6cdade9678fffdc 315 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 289 1.1E-68 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AVL55_11545 363844cd96aebc37d6cdade9678fffdc 315 SMART SM00797 24 306 1.1E-82 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AVL55_11545 363844cd96aebc37d6cdade9678fffdc 315 SUPERFAMILY SSF50891 185 296 4.55E-5 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_11545 363844cd96aebc37d6cdade9678fffdc 315 Gene3D G3DSA:2.40.100.10 179 312 2.2E-38 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_05615 bd984e96767c5a8a10a6a9f7f0ffb2a8 64 SUPERFAMILY SSF46955 11 59 2.75E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_18085 d3dba04b1d404fdb29149fdc6f874156 530 Pfam PF03929 PepSY-associated TM region 3 361 2.2E-56 T 11-10-2018 IPR005625 PepSY-associated TM protein AVL55_02240 a39ff2464180a068ab2edeffa090b999 378 Gene3D G3DSA:3.40.50.20 1 83 9.9E-16 T 11-10-2018 AVL55_02240 a39ff2464180a068ab2edeffa090b999 378 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 350 3.3E-105 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AVL55_02240 a39ff2464180a068ab2edeffa090b999 378 Gene3D G3DSA:3.30.470.20 176 367 1.5E-73 T 11-10-2018 AVL55_02240 a39ff2464180a068ab2edeffa090b999 378 Pfam PF02222 ATP-grasp domain 101 274 3.9E-48 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AVL55_02240 a39ff2464180a068ab2edeffa090b999 378 SUPERFAMILY SSF52440 1 87 1.58E-14 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AVL55_02240 a39ff2464180a068ab2edeffa090b999 378 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 347 36.183 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AVL55_02240 a39ff2464180a068ab2edeffa090b999 378 Gene3D G3DSA:3.30.1490.20 92 174 5.8E-16 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_02240 a39ff2464180a068ab2edeffa090b999 378 SUPERFAMILY SSF56059 92 295 3.36E-56 T 11-10-2018 AVL55_02240 a39ff2464180a068ab2edeffa090b999 378 SUPERFAMILY SSF51246 299 369 6.43E-17 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AVL55_12065 858f679f96b0c9394cec7ed721263774 552 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 546 1.8E-178 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_12065 858f679f96b0c9394cec7ed721263774 552 PRINTS PR00175 Sodium/alanine symporter signature 93 115 2.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_12065 858f679f96b0c9394cec7ed721263774 552 PRINTS PR00175 Sodium/alanine symporter signature 456 478 2.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_12065 858f679f96b0c9394cec7ed721263774 552 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_12065 858f679f96b0c9394cec7ed721263774 552 PRINTS PR00175 Sodium/alanine symporter signature 307 325 2.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_12065 858f679f96b0c9394cec7ed721263774 552 PRINTS PR00175 Sodium/alanine symporter signature 515 535 2.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_12065 858f679f96b0c9394cec7ed721263774 552 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.0E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_12065 858f679f96b0c9394cec7ed721263774 552 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_12065 858f679f96b0c9394cec7ed721263774 552 Pfam PF01235 Sodium:alanine symporter family 56 552 8.5E-142 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AVL55_15135 d6a19fc7bd46195ba8113af8d24facf7 300 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 299 1.6E-28 T 11-10-2018 IPR031347 Protein AmpE AVL55_03420 b9982e21d423c73d7596365909d2a294 233 Gene3D G3DSA:1.25.40.10 24 230 4.5E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_03420 b9982e21d423c73d7596365909d2a294 233 SUPERFAMILY SSF48452 77 201 2.56E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_00750 a35c9c3fbfdee3614473060daa44dc3c 290 Gene3D G3DSA:3.40.50.20 41 82 8.8E-12 T 11-10-2018 AVL55_00750 a35c9c3fbfdee3614473060daa44dc3c 290 Gene3D G3DSA:3.30.1490.20 105 175 8.8E-12 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AVL55_00750 a35c9c3fbfdee3614473060daa44dc3c 290 Gene3D G3DSA:3.30.470.20 83 232 8.8E-12 T 11-10-2018 AVL55_00750 a35c9c3fbfdee3614473060daa44dc3c 290 SUPERFAMILY SSF56059 99 287 3.36E-17 T 11-10-2018 AVL55_00750 a35c9c3fbfdee3614473060daa44dc3c 290 Pfam PF08443 RimK-like ATP-grasp domain 132 259 2.9E-7 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AVL55_06555 cc1396e67fc5c81f9cbb153e5a16ac26 677 Gene3D G3DSA:1.25.40.10 394 509 3.4E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_06555 cc1396e67fc5c81f9cbb153e5a16ac26 677 SUPERFAMILY SSF53300 99 274 1.39E-15 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_06555 cc1396e67fc5c81f9cbb153e5a16ac26 677 Pfam PF13519 von Willebrand factor type A domain 99 205 2.9E-13 T 11-10-2018 IPR002035 von Willebrand factor, type A AVL55_06555 cc1396e67fc5c81f9cbb153e5a16ac26 677 SMART SM00028 445 478 1.5E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AVL55_06555 cc1396e67fc5c81f9cbb153e5a16ac26 677 Gene3D G3DSA:3.40.50.410 95 291 1.1E-28 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AVL55_06555 cc1396e67fc5c81f9cbb153e5a16ac26 677 Pfam PF07719 Tetratricopeptide repeat 446 477 4.0E-7 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 AVL55_06555 cc1396e67fc5c81f9cbb153e5a16ac26 677 SUPERFAMILY SSF48452 400 492 4.6E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_11225 d3e1ab59982287dc09e51c671bfc33b8 291 Pfam PF00892 EamA-like transporter family 159 289 7.0E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_11225 d3e1ab59982287dc09e51c671bfc33b8 291 Pfam PF00892 EamA-like transporter family 5 145 1.2E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_11225 d3e1ab59982287dc09e51c671bfc33b8 291 SUPERFAMILY SSF103481 70 149 1.1E-7 T 11-10-2018 AVL55_11225 d3e1ab59982287dc09e51c671bfc33b8 291 SUPERFAMILY SSF103481 213 289 1.2E-10 T 11-10-2018 AVL55_10285 f5f6085f23f429f3261c8a1f04195121 370 Pfam PF04796 Plasmid encoded RepA protein 153 307 1.2E-26 T 11-10-2018 IPR006881 Plasmid encoded RepA protein AVL55_04600 e5b7e86b32736e1bb58adb83ab264cdb 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AVL55_04600 e5b7e86b32736e1bb58adb83ab264cdb 335 SUPERFAMILY SSF53659 3 335 6.14E-126 T 11-10-2018 AVL55_04600 e5b7e86b32736e1bb58adb83ab264cdb 335 Gene3D G3DSA:3.40.718.10 1 335 1.1E-140 T 11-10-2018 AVL55_04600 e5b7e86b32736e1bb58adb83ab264cdb 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 330 6.3E-109 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AVL55_04600 e5b7e86b32736e1bb58adb83ab264cdb 335 SMART SM01329 5 331 3.0E-181 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AVL55_12785 52b538fd0f484826f223ff03bea841c9 119 Pfam PF08888 HopJ type III effector protein 9 114 2.5E-43 T 11-10-2018 IPR014984 HopJ type III effector protein AVL55_12785 52b538fd0f484826f223ff03bea841c9 119 Gene3D G3DSA:3.20.160.10 1 117 1.4E-44 T 11-10-2018 IPR038604 Type III effector HopJ superfamily AVL55_16965 b8725a118e8d425c30dac97b9aa10d05 277 SUPERFAMILY SSF56235 2 251 1.06E-47 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_16965 b8725a118e8d425c30dac97b9aa10d05 277 Gene3D G3DSA:3.60.20.10 1 257 4.0E-96 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AVL55_16965 b8725a118e8d425c30dac97b9aa10d05 277 Pfam PF13230 Glutamine amidotransferases class-II 1 266 2.5E-108 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 AVL55_13590 f12ec3346660df3055d487652478bdc4 376 SUPERFAMILY SSF56112 49 364 2.94E-52 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AVL55_13590 f12ec3346660df3055d487652478bdc4 376 Gene3D G3DSA:3.90.1200.10 142 369 3.3E-62 T 11-10-2018 AVL55_13590 f12ec3346660df3055d487652478bdc4 376 Gene3D G3DSA:3.30.200.20 17 136 5.2E-25 T 11-10-2018 AVL55_13590 f12ec3346660df3055d487652478bdc4 376 Pfam PF01636 Phosphotransferase enzyme family 51 288 4.0E-36 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AVL55_12465 f7257df3117acb3a7c9490f8d794af99 163 SUPERFAMILY SSF50891 1 161 5.41E-61 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_12465 f7257df3117acb3a7c9490f8d794af99 163 Gene3D G3DSA:2.40.100.10 1 163 2.2E-68 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AVL55_12465 f7257df3117acb3a7c9490f8d794af99 163 PIRSF PIRSF001467 1 162 6.2E-28 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AVL55_12465 f7257df3117acb3a7c9490f8d794af99 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 160 1.5E-48 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AVL55_12465 f7257df3117acb3a7c9490f8d794af99 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AVL55_12465 f7257df3117acb3a7c9490f8d794af99 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 9.0E-14 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AVL55_12465 f7257df3117acb3a7c9490f8d794af99 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 9.0E-14 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AVL55_12465 f7257df3117acb3a7c9490f8d794af99 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 9.0E-14 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AVL55_10370 abb363a46caee2055d927bc6286c303f 94 SUPERFAMILY SSF141868 6 93 2.35E-14 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_10370 abb363a46caee2055d927bc6286c303f 94 Pfam PF00563 EAL domain 11 89 2.2E-11 T 11-10-2018 IPR001633 EAL domain AVL55_10370 abb363a46caee2055d927bc6286c303f 94 Gene3D G3DSA:3.20.20.450 1 94 4.2E-12 T 11-10-2018 IPR035919 EAL domain superfamily AVL55_15820 daf3dc34090bc87b2836a9ceafd1983f 134 Pfam PF00581 Rhodanese-like domain 40 126 4.7E-19 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_15820 daf3dc34090bc87b2836a9ceafd1983f 134 SUPERFAMILY SSF52821 28 131 2.88E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_15820 daf3dc34090bc87b2836a9ceafd1983f 134 SMART SM00450 33 130 5.4E-23 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_15820 daf3dc34090bc87b2836a9ceafd1983f 134 Gene3D G3DSA:3.40.250.10 35 133 3.8E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_07830 f7441cd9a98abdcd7bb26aadebc4dbee 358 SUPERFAMILY SSF52151 33 314 6.8E-13 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 240 1.4E-44 T 11-10-2018 AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 Gene3D G3DSA:3.40.50.720 1 245 6.0E-62 T 11-10-2018 AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.5E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.5E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.5E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AVL55_08080 5e18001127c481d25b50e3a3be5d459e 249 SUPERFAMILY SSF51735 5 243 2.26E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_04010 99792d71bfea92f8415ddae1cf88bebe 519 Gene3D G3DSA:1.10.3720.10 262 516 3.2E-31 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_04010 99792d71bfea92f8415ddae1cf88bebe 519 SUPERFAMILY SSF161098 246 504 4.71E-36 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_04010 99792d71bfea92f8415ddae1cf88bebe 519 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 289 514 2.4E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_04010 99792d71bfea92f8415ddae1cf88bebe 519 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 255 513 3.2E-73 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AVL55_01415 9982dbc8d5050c2cf1c33de0e55f8d43 123 SUPERFAMILY SSF55008 14 80 3.76E-5 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AVL55_14375 4507e307cd495af3b5ac28cb6d49d27d 95 Gene3D G3DSA:3.40.50.12740 1 95 2.8E-24 T 11-10-2018 AVL55_14375 4507e307cd495af3b5ac28cb6d49d27d 95 SUPERFAMILY SSF52172 1 92 1.71E-25 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_14375 4507e307cd495af3b5ac28cb6d49d27d 95 Pfam PF00072 Response regulator receiver domain 2 83 2.5E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_14805 fef784122cd93e56b027d665bad2e055 386 Gene3D G3DSA:1.20.1250.20 206 386 7.3E-13 T 11-10-2018 AVL55_14805 fef784122cd93e56b027d665bad2e055 386 Gene3D G3DSA:1.20.1250.20 10 200 2.4E-14 T 11-10-2018 AVL55_14805 fef784122cd93e56b027d665bad2e055 386 SUPERFAMILY SSF103473 13 382 2.75E-39 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_14805 fef784122cd93e56b027d665bad2e055 386 Pfam PF07690 Major Facilitator Superfamily 14 347 2.9E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_16140 ac4db4524661b5b375bdab9e07a63d5a 149 Pfam PF11215 Protein of unknown function (DUF3010) 1 135 2.7E-55 T 11-10-2018 IPR021378 Protein of unknown function DUF3010 AVL55_02335 80ed81edc6796378eb570db4bc840643 500 Pfam PF07075 Protein of unknown function (DUF1343) 127 496 4.9E-118 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 AVL55_17970 06e70eb9f92e8c7f345077dcd67f8989 238 Pfam PF03749 Sugar fermentation stimulation protein 13 228 7.3E-70 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AVL55_17970 06e70eb9f92e8c7f345077dcd67f8989 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 52.599 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AVL55_17970 06e70eb9f92e8c7f345077dcd67f8989 238 Gene3D G3DSA:3.40.1350.60 81 238 8.5E-47 T 11-10-2018 AVL55_17970 06e70eb9f92e8c7f345077dcd67f8989 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 237 4.6E-63 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AVL55_17970 06e70eb9f92e8c7f345077dcd67f8989 238 Gene3D G3DSA:2.40.50.580 1 80 2.1E-32 T 11-10-2018 AVL55_01220 38eccc6fc22b32d18d4a355e6f0a3974 941 Pfam PF13700 Domain of unknown function (DUF4158) 1 115 3.4E-12 T 11-10-2018 IPR025296 Domain of unknown function DUF4158 AVL55_01220 38eccc6fc22b32d18d4a355e6f0a3974 941 Pfam PF01526 Tn3 transposase DDE domain 531 917 4.2E-117 T 11-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AVL55_03200 d1c03051cdb3926cd4f0844bfd6caef2 320 Pfam PF12849 PBP superfamily domain 35 293 5.1E-29 T 11-10-2018 IPR024370 PBP domain AVL55_03200 d1c03051cdb3926cd4f0844bfd6caef2 320 SUPERFAMILY SSF53850 36 318 1.24E-60 T 11-10-2018 AVL55_03200 d1c03051cdb3926cd4f0844bfd6caef2 320 Gene3D G3DSA:3.40.190.10 37 307 1.9E-91 T 11-10-2018 AVL55_03200 d1c03051cdb3926cd4f0844bfd6caef2 320 Gene3D G3DSA:3.40.190.10 122 264 1.9E-91 T 11-10-2018 AVL55_03200 d1c03051cdb3926cd4f0844bfd6caef2 320 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 29 305 4.6E-64 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 AVL55_16365 0a6a5d07ef5937819130ad77e20ebd9f 164 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 82 2.7E-7 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AVL55_16365 0a6a5d07ef5937819130ad77e20ebd9f 164 Gene3D G3DSA:1.20.1290.10 21 157 4.0E-21 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AVL55_16365 0a6a5d07ef5937819130ad77e20ebd9f 164 SUPERFAMILY SSF69118 7 157 1.44E-18 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AVL55_03605 63518a4280a583ec9b4939b3ca5ccc75 102 Gene3D G3DSA:3.30.750.24 5 102 3.2E-14 T 11-10-2018 IPR036513 STAS domain superfamily AVL55_03605 63518a4280a583ec9b4939b3ca5ccc75 102 SUPERFAMILY SSF52091 5 101 3.34E-13 T 11-10-2018 IPR036513 STAS domain superfamily AVL55_03605 63518a4280a583ec9b4939b3ca5ccc75 102 Pfam PF13466 STAS domain 13 94 8.4E-12 T 11-10-2018 IPR002645 STAS domain AVL55_18070 de0e8af5f91b76aa570a1f7e98a0eff4 176 Pfam PF10029 Predicted periplasmic protein (DUF2271) 29 168 1.3E-41 T 11-10-2018 IPR014469 Protein of unknown function DUF2271 AVL55_18070 de0e8af5f91b76aa570a1f7e98a0eff4 176 PIRSF PIRSF014995 3 176 1.1E-50 T 11-10-2018 IPR014469 Protein of unknown function DUF2271 AVL55_04715 552feabd0fcae0def2ee03d7ac409443 287 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 243 269 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AVL55_04715 552feabd0fcae0def2ee03d7ac409443 287 Pfam PF01148 Cytidylyltransferase family 3 282 3.0E-60 T 11-10-2018 AVL55_03405 d550016ebd4e2a470d8cc6d30c17ff6a 122 Pfam PF04304 Protein of unknown function (DUF454) 3 117 2.1E-34 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AVL55_03405 d550016ebd4e2a470d8cc6d30c17ff6a 122 PIRSF PIRSF016789 2 122 2.6E-32 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AVL55_06640 4c8458a11820dfd72ad3fd64a6c02450 1240 Pfam PF12128 Protein of unknown function (DUF3584) 8 1202 0.0 T 11-10-2018 IPR021979 Protein of unknown function DUF3584 AVL55_18430 ca937c438eef775d4844860a45a0f97c 305 Pfam PF02574 Homocysteine S-methyltransferase 9 299 4.0E-60 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AVL55_18430 ca937c438eef775d4844860a45a0f97c 305 PIRSF PIRSF037505 258 305 0.0061 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AVL55_18430 ca937c438eef775d4844860a45a0f97c 305 PIRSF PIRSF037505 3 188 2.2E-5 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AVL55_18430 ca937c438eef775d4844860a45a0f97c 305 SUPERFAMILY SSF82282 5 300 6.54E-75 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AVL55_18430 ca937c438eef775d4844860a45a0f97c 305 Gene3D G3DSA:3.20.20.330 2 298 3.8E-70 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AVL55_18310 709498fcac4e17c1eee06ff8221fd17b 132 SUPERFAMILY SSF55021 3 68 7.32E-14 T 11-10-2018 AVL55_18310 709498fcac4e17c1eee06ff8221fd17b 132 Gene3D G3DSA:3.30.2130.10 1 132 3.2E-40 T 11-10-2018 AVL55_18310 709498fcac4e17c1eee06ff8221fd17b 132 Pfam PF10000 ACT domain 3 69 2.5E-17 T 11-10-2018 IPR018717 Domain of unknown function DUF2241 AVL55_18310 709498fcac4e17c1eee06ff8221fd17b 132 SUPERFAMILY SSF55021 70 131 5.95E-19 T 11-10-2018 AVL55_18310 709498fcac4e17c1eee06ff8221fd17b 132 Pfam PF13840 ACT domain 75 128 1.2E-12 T 11-10-2018 IPR027795 CASTOR, ACT domain AVL55_03510 3f5e72f861ab060ded0b7834cc439be7 244 Gene3D G3DSA:1.10.760.10 24 209 7.3E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_03510 3f5e72f861ab060ded0b7834cc439be7 244 Pfam PF02167 Cytochrome C1 family 30 243 9.5E-21 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AVL55_03510 3f5e72f861ab060ded0b7834cc439be7 244 SUPERFAMILY SSF46626 16 208 3.73E-51 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_03510 3f5e72f861ab060ded0b7834cc439be7 244 PRINTS PR00603 Cytochrome C1 signature 42 61 1.3E-5 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AVL55_03510 3f5e72f861ab060ded0b7834cc439be7 244 PRINTS PR00603 Cytochrome C1 signature 190 209 1.3E-5 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AVL55_03510 3f5e72f861ab060ded0b7834cc439be7 244 PRINTS PR00603 Cytochrome C1 signature 209 224 1.3E-5 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AVL55_03510 3f5e72f861ab060ded0b7834cc439be7 244 PRINTS PR00603 Cytochrome C1 signature 22 41 1.3E-5 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AVL55_18025 ebafa6e2cca2f320ee0fbfe5a7ce18f2 310 SUPERFAMILY SSF52540 4 231 7.07E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_18025 ebafa6e2cca2f320ee0fbfe5a7ce18f2 310 Gene3D G3DSA:3.40.50.300 1 235 1.6E-65 T 11-10-2018 AVL55_18025 ebafa6e2cca2f320ee0fbfe5a7ce18f2 310 Pfam PF00005 ABC transporter 20 164 1.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_18025 ebafa6e2cca2f320ee0fbfe5a7ce18f2 310 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AVL55_18025 ebafa6e2cca2f320ee0fbfe5a7ce18f2 310 SMART SM00382 29 211 1.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_12335 a22bd6423c57be2d999515d4db002fb4 182 Pfam PF03572 Peptidase family S41 14 47 8.1E-5 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AVL55_12335 a22bd6423c57be2d999515d4db002fb4 182 Pfam PF03572 Peptidase family S41 63 129 2.6E-6 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AVL55_12335 a22bd6423c57be2d999515d4db002fb4 182 SUPERFAMILY SSF52096 19 163 5.14E-20 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AVL55_12335 a22bd6423c57be2d999515d4db002fb4 182 Gene3D G3DSA:3.90.226.10 6 121 1.8E-15 T 11-10-2018 AVL55_15490 655076823b75d84427bfcc4a27bd0ab8 117 SMART SM00360 2 75 4.5E-25 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AVL55_15490 655076823b75d84427bfcc4a27bd0ab8 117 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 3.2E-21 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AVL55_15490 655076823b75d84427bfcc4a27bd0ab8 117 SUPERFAMILY SSF54928 2 81 7.52E-27 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AVL55_15490 655076823b75d84427bfcc4a27bd0ab8 117 Gene3D G3DSA:3.30.70.330 2 87 3.9E-27 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AVL55_17185 0abee247435c2c506e1f5df4bfc46489 207 Pfam PF00924 Mechanosensitive ion channel 61 170 7.8E-9 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AVL55_17185 0abee247435c2c506e1f5df4bfc46489 207 SUPERFAMILY SSF50182 105 170 1.93E-7 T 11-10-2018 IPR010920 LSM domain superfamily AVL55_19465 70ed801f8529870e227e32f7649257f4 68 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 5 62 9.2E-26 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AVL55_19465 70ed801f8529870e227e32f7649257f4 68 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 61 8.9E-19 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AVL55_01790 d5913f1e10a03eea2b79ce1bda1daef2 308 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 7 297 2.6E-47 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AVL55_01790 d5913f1e10a03eea2b79ce1bda1daef2 308 Pfam PF04261 Dyp-type peroxidase family 37 297 3.1E-51 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AVL55_01790 d5913f1e10a03eea2b79ce1bda1daef2 308 SUPERFAMILY SSF54909 1 300 5.54E-87 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_08490 c18ecc713692104a91450a2c289062dc 448 Pfam PF03553 Na+/H+ antiporter family 246 432 5.3E-10 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AVL55_08490 c18ecc713692104a91450a2c289062dc 448 Pfam PF03553 Na+/H+ antiporter family 23 221 1.6E-13 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AVL55_00190 8ccbf2b140492a5379251eee58c62def 276 SUPERFAMILY SSF53850 27 249 2.06E-16 T 11-10-2018 AVL55_00190 8ccbf2b140492a5379251eee58c62def 276 Gene3D G3DSA:3.40.190.10 121 212 1.3E-9 T 11-10-2018 AVL55_00190 8ccbf2b140492a5379251eee58c62def 276 Gene3D G3DSA:3.40.190.10 39 245 1.3E-9 T 11-10-2018 AVL55_17275 f177bfcd2514f7657207098e9c557bc2 360 SUPERFAMILY SSF51735 1 344 4.77E-97 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AVL55_17275 f177bfcd2514f7657207098e9c557bc2 360 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 346 1.1E-153 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AVL55_17275 f177bfcd2514f7657207098e9c557bc2 360 Gene3D G3DSA:3.90.25.10 211 340 2.8E-137 T 11-10-2018 AVL55_17275 f177bfcd2514f7657207098e9c557bc2 360 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 332 1.8E-97 T 11-10-2018 IPR016040 NAD(P)-binding domain AVL55_17275 f177bfcd2514f7657207098e9c557bc2 360 Gene3D G3DSA:3.40.50.720 5 331 2.8E-137 T 11-10-2018 AVL55_02475 fe774805d29440d3e7e52334070f730e 73 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 4 64 3.5E-17 T 11-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 Pfam PF05193 Peptidase M16 inactive domain 688 864 1.2E-25 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 Pfam PF05193 Peptidase M16 inactive domain 216 393 8.6E-26 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 Gene3D G3DSA:3.30.830.10 270 472 6.0E-37 T 11-10-2018 AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 Gene3D G3DSA:3.30.830.10 742 936 2.6E-32 T 11-10-2018 AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 Pfam PF00675 Insulinase (Peptidase family M16) 59 177 1.1E-18 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 Pfam PF00675 Insulinase (Peptidase family M16) 540 659 1.1E-14 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 SUPERFAMILY SSF63411 744 944 7.02E-36 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 Gene3D G3DSA:3.30.830.10 43 268 2.9E-68 T 11-10-2018 AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 SUPERFAMILY SSF63411 275 465 2.23E-35 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 SUPERFAMILY SSF63411 47 255 5.87E-56 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 Gene3D G3DSA:3.30.830.10 526 733 3.1E-43 T 11-10-2018 AVL55_06270 2ed254e1945c8411976e314d1c814fb1 961 SUPERFAMILY SSF63411 519 724 9.89E-46 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AVL55_06460 e892572ffc7e416e725f0664ca6aba51 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.9E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AVL55_06460 e892572ffc7e416e725f0664ca6aba51 308 Gene3D G3DSA:1.10.10.10 9 99 1.5E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_06460 e892572ffc7e416e725f0664ca6aba51 308 SUPERFAMILY SSF53850 107 302 3.62E-13 T 11-10-2018 AVL55_06460 e892572ffc7e416e725f0664ca6aba51 308 Pfam PF03466 LysR substrate binding domain 116 296 4.4E-8 T 11-10-2018 IPR005119 LysR, substrate-binding AVL55_06460 e892572ffc7e416e725f0664ca6aba51 308 Gene3D G3DSA:3.40.190.290 103 304 5.1E-8 T 11-10-2018 AVL55_06460 e892572ffc7e416e725f0664ca6aba51 308 SUPERFAMILY SSF46785 9 94 2.72E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_18895 deb5fc66f92719d8728f2370753dc8a5 340 Gene3D G3DSA:3.40.50.2300 145 331 1.6E-34 T 11-10-2018 AVL55_18895 deb5fc66f92719d8728f2370753dc8a5 340 Gene3D G3DSA:3.40.50.2300 59 309 1.6E-34 T 11-10-2018 AVL55_18895 deb5fc66f92719d8728f2370753dc8a5 340 Pfam PF04392 ABC transporter substrate binding protein 38 337 5.5E-19 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 SUPERFAMILY SSF55486 35 606 9.53E-205 T 11-10-2018 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 Pfam PF01401 Angiotensin-converting enzyme 35 606 7.5E-210 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 340 365 1.2E-79 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 372 388 1.2E-79 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 502 530 1.2E-79 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 474 501 1.2E-79 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 439 464 1.2E-79 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 400 420 1.2E-79 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 263 284 1.2E-79 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 228 255 1.2E-79 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AVL55_08735 74bc6009d6e7468a121d8c2da3ab754c 606 Gene3D G3DSA:1.10.1370.30 347 602 4.5E-6 T 11-10-2018 AVL55_02270 fa78758a2988ca5483d65cdad7d8492f 110 Pfam PF06127 Protein of unknown function (DUF962) 11 105 3.1E-38 T 11-10-2018 IPR009305 Protein of unknown function DUF962 AVL55_05520 a19ab3a606f671f1b79065c42fe26e13 214 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 16 198 1.3E-14 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AVL55_05520 a19ab3a606f671f1b79065c42fe26e13 214 Pfam PF04973 Nicotinamide mononucleotide transporter 16 194 8.0E-36 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AVL55_19950 87a50a4b8501ec3dfd29748b4fc124e8 155 Gene3D G3DSA:3.10.450.50 17 147 1.9E-11 T 11-10-2018 AVL55_19950 87a50a4b8501ec3dfd29748b4fc124e8 155 Pfam PF13474 SnoaL-like domain 26 140 1.2E-30 T 11-10-2018 IPR037401 SnoaL-like domain AVL55_19950 87a50a4b8501ec3dfd29748b4fc124e8 155 SUPERFAMILY SSF54427 20 141 1.64E-18 T 11-10-2018 IPR032710 NTF2-like domain superfamily AVL55_01490 95c234d35f537473d0e6f80f7785b21f 355 Pfam PF01261 Xylose isomerase-like TIM barrel 33 282 4.1E-41 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AVL55_01490 95c234d35f537473d0e6f80f7785b21f 355 SUPERFAMILY SSF51658 12 326 7.88E-66 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AVL55_01490 95c234d35f537473d0e6f80f7785b21f 355 Pfam PF07582 AP endonuclease family 2 C terminus 283 337 3.0E-21 T 11-10-2018 IPR011418 AP endonuclease, family 2, C-terminal AVL55_01490 95c234d35f537473d0e6f80f7785b21f 355 Gene3D G3DSA:3.20.20.150 21 329 2.1E-75 T 11-10-2018 AVL55_08575 c69d99fb455b46ca9be9b928f75a9045 446 Pfam PF04996 Succinylarginine dihydrolase 3 444 5.6E-226 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AVL55_08575 c69d99fb455b46ca9be9b928f75a9045 446 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 444 1.8E-224 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AVL55_08575 c69d99fb455b46ca9be9b928f75a9045 446 SUPERFAMILY SSF55909 3 445 2.16E-209 T 11-10-2018 AVL55_08575 c69d99fb455b46ca9be9b928f75a9045 446 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 445 59.902 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AVL55_08575 c69d99fb455b46ca9be9b928f75a9045 446 Gene3D G3DSA:3.75.10.20 1 446 1.2E-206 T 11-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 SUPERFAMILY SSF56542 17 383 3.01E-70 T 11-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 SUPERFAMILY SSF55035 122 236 8.24E-36 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 26 394 7.0E-119 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 Gene3D G3DSA:3.30.70.420 121 236 1.6E-109 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 Gene3D G3DSA:3.90.770.10 67 380 1.6E-109 T 11-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 217 242 7.6E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 176 194 7.6E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 87 107 7.6E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 56 77 7.6E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 319 340 7.6E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_03410 e8938ca552a7d10c8daf4e6a3ee1df3e 396 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 267 293 7.6E-37 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AVL55_05015 21d3945f5477ed1a5582c43ea481c2f0 762 SUPERFAMILY SSF56784 19 219 2.45E-9 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_05015 21d3945f5477ed1a5582c43ea481c2f0 762 Gene3D G3DSA:3.40.50.1000 19 218 2.6E-10 T 11-10-2018 IPR023214 HAD superfamily AVL55_05015 21d3945f5477ed1a5582c43ea481c2f0 762 Gene3D G3DSA:1.10.150.400 30 107 2.6E-10 T 11-10-2018 AVL55_07990 bb5fcc2dea89f6a9ed7a72e72c1d7667 130 Gene3D G3DSA:3.30.450.20 14 125 4.8E-8 T 11-10-2018 AVL55_00050 1f92da7df5dd7ec395e14e3adebbbd19 167 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 160 14.591 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 AVL55_00050 1f92da7df5dd7ec395e14e3adebbbd19 167 Pfam PF04220 Der GTPase activator (YihI) 24 152 4.6E-36 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 AVL55_03755 8571a6a52a5e42aa30f9cd42d3fd9de1 443 SUPERFAMILY SSF56672 22 372 6.23E-23 T 11-10-2018 AVL55_03755 8571a6a52a5e42aa30f9cd42d3fd9de1 443 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 74 278 8.7E-22 T 11-10-2018 IPR000477 Reverse transcriptase domain AVL55_06335 d5496bd582e11dfe340f8927be20e8d6 116 Gene3D G3DSA:3.40.30.10 7 113 6.5E-31 T 11-10-2018 AVL55_06335 d5496bd582e11dfe340f8927be20e8d6 116 Pfam PF00462 Glutaredoxin 22 86 1.5E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AVL55_06335 d5496bd582e11dfe340f8927be20e8d6 116 PIRSF PIRSF005894 3 113 4.9E-51 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AVL55_06335 d5496bd582e11dfe340f8927be20e8d6 116 SUPERFAMILY SSF52833 8 109 4.35E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_06335 d5496bd582e11dfe340f8927be20e8d6 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 106 9.2E-46 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related AVL55_16210 72998b56f5f877c2b77cf5966fae6819 297 Pfam PF13280 WYL domain 119 198 1.6E-11 T 11-10-2018 IPR026881 WYL domain AVL55_16210 72998b56f5f877c2b77cf5966fae6819 297 PIRSF PIRSF015558 1 284 6.2E-90 T 11-10-2018 IPR016634 WYL domain protein, s026 type AVL55_08030 3720110993398237b2043a75b2b362cf 414 Gene3D G3DSA:3.30.70.360 217 330 1.7E-134 T 11-10-2018 AVL55_08030 3720110993398237b2043a75b2b362cf 414 SUPERFAMILY SSF53187 24 411 2.1E-76 T 11-10-2018 AVL55_08030 3720110993398237b2043a75b2b362cf 414 Gene3D G3DSA:3.40.630.10 31 406 1.7E-134 T 11-10-2018 AVL55_08030 3720110993398237b2043a75b2b362cf 414 Pfam PF01546 Peptidase family M20/M25/M40 81 409 9.0E-30 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AVL55_08030 3720110993398237b2043a75b2b362cf 414 PIRSF PIRSF001235 8 414 3.8E-130 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AVL55_08030 3720110993398237b2043a75b2b362cf 414 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 27 410 5.6E-119 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AVL55_08030 3720110993398237b2043a75b2b362cf 414 SUPERFAMILY SSF55031 217 332 6.63E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AVL55_02115 ae1bf7530a24b1c45171f0e62c715a35 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.491 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 AVL55_02115 ae1bf7530a24b1c45171f0e62c715a35 181 Gene3D G3DSA:3.30.420.10 1 181 2.1E-73 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AVL55_02115 ae1bf7530a24b1c45171f0e62c715a35 181 Pfam PF00929 Exonuclease 9 170 6.9E-35 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_02115 ae1bf7530a24b1c45171f0e62c715a35 181 SMART SM00479 7 180 9.2E-22 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AVL55_02115 ae1bf7530a24b1c45171f0e62c715a35 181 SUPERFAMILY SSF53098 4 179 3.72E-49 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AVL55_17040 1ad576b09a2d7d9a2187dd43572fc52e 341 PIRSF PIRSF006268 3 338 2.3E-94 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AVL55_17040 1ad576b09a2d7d9a2187dd43572fc52e 341 Gene3D G3DSA:3.10.520.20 21 341 4.3E-112 T 11-10-2018 AVL55_17040 1ad576b09a2d7d9a2187dd43572fc52e 341 SUPERFAMILY SSF143631 30 337 3.14E-99 T 11-10-2018 IPR003374 ApbE-like superfamily AVL55_17040 1ad576b09a2d7d9a2187dd43572fc52e 341 Pfam PF02424 ApbE family 38 315 2.1E-86 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AVL55_14065 56feb464d0dad3cf507a964c9126d325 443 Pfam PF04932 O-Antigen ligase 205 363 2.6E-15 T 11-10-2018 IPR007016 O-antigen ligase-related AVL55_03635 f8309cfb878a4b9cab04c8a0fd6977b2 365 Pfam PF03969 AFG1-like ATPase 1 361 3.4E-145 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 AVL55_03635 f8309cfb878a4b9cab04c8a0fd6977b2 365 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 365 54.22 T 11-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AVL55_03635 f8309cfb878a4b9cab04c8a0fd6977b2 365 Gene3D G3DSA:3.40.50.300 5 190 3.2E-19 T 11-10-2018 AVL55_03635 f8309cfb878a4b9cab04c8a0fd6977b2 365 SUPERFAMILY SSF52540 60 205 2.15E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16565 82bc8e65a6265c74abb1e4f55a864e94 267 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 46 259 3.2E-44 T 11-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related AVL55_18380 4aaace331a214be853df0498d511feba 297 Gene3D G3DSA:3.60.110.10 1 296 1.0E-93 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AVL55_18380 4aaace331a214be853df0498d511feba 297 Pfam PF00795 Carbon-nitrogen hydrolase 7 275 1.5E-59 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AVL55_18380 4aaace331a214be853df0498d511feba 297 SUPERFAMILY SSF56317 5 294 2.75E-85 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AVL55_08395 51212bfaee013e76b6924c8e3d0bd5e6 299 Pfam PF00682 HMGL-like 7 280 6.7E-56 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AVL55_08395 51212bfaee013e76b6924c8e3d0bd5e6 299 SUPERFAMILY SSF51569 3 292 4.4E-72 T 11-10-2018 AVL55_08395 51212bfaee013e76b6924c8e3d0bd5e6 299 Gene3D G3DSA:3.20.20.70 1 299 3.4E-132 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_09640 9a8ce97ae2407cf3b2526d4491e69f2c 286 Pfam PF01734 Patatin-like phospholipase 5 52 2.3E-6 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AVL55_09640 9a8ce97ae2407cf3b2526d4491e69f2c 286 Gene3D G3DSA:3.40.1090.10 88 227 8.2E-10 T 11-10-2018 AVL55_09640 9a8ce97ae2407cf3b2526d4491e69f2c 286 Gene3D G3DSA:3.40.1090.10 1 86 6.0E-9 T 11-10-2018 AVL55_09640 9a8ce97ae2407cf3b2526d4491e69f2c 286 SUPERFAMILY SSF52151 1 272 8.89E-35 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AVL55_01460 f3216a74e6e4f4d034b6c427909c9685 172 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 166 3.5E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_01460 f3216a74e6e4f4d034b6c427909c9685 172 Gene3D G3DSA:1.10.260.80 24 75 6.9E-50 T 11-10-2018 AVL55_01460 f3216a74e6e4f4d034b6c427909c9685 172 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 171 2.0E-18 T 11-10-2018 AVL55_01460 f3216a74e6e4f4d034b6c427909c9685 172 SUPERFAMILY SSF56784 9 172 4.14E-29 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_01460 f3216a74e6e4f4d034b6c427909c9685 172 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 14 171 3.4E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AVL55_01460 f3216a74e6e4f4d034b6c427909c9685 172 Gene3D G3DSA:3.40.50.1000 12 171 6.9E-50 T 11-10-2018 IPR023214 HAD superfamily AVL55_01050 01b798ef8c0b9c9ab4a312a90ad110ff 194 Gene3D G3DSA:3.40.50.1240 4 190 1.7E-7 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AVL55_01050 01b798ef8c0b9c9ab4a312a90ad110ff 194 SUPERFAMILY SSF53254 12 175 1.31E-10 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AVL55_11335 55c101fb75895a842afaf78b0169ed70 332 Gene3D G3DSA:3.40.50.150 78 319 6.1E-26 T 11-10-2018 AVL55_11335 55c101fb75895a842afaf78b0169ed70 332 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 330 2.5E-149 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AVL55_11335 55c101fb75895a842afaf78b0169ed70 332 Pfam PF08003 Protein of unknown function (DUF1698) 13 331 7.2E-149 T 11-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AVL55_11335 55c101fb75895a842afaf78b0169ed70 332 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 17 331 54.466 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AVL55_11335 55c101fb75895a842afaf78b0169ed70 332 SUPERFAMILY SSF53335 96 331 1.66E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_04645 eddaff031aa1795a44b9a1f14ee365e1 215 Gene3D G3DSA:3.40.630.30 21 213 4.4E-17 T 11-10-2018 AVL55_04645 eddaff031aa1795a44b9a1f14ee365e1 215 SUPERFAMILY SSF55729 23 190 8.39E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_04645 eddaff031aa1795a44b9a1f14ee365e1 215 Pfam PF00583 Acetyltransferase (GNAT) family 66 173 2.1E-5 T 11-10-2018 IPR000182 GNAT domain AVL55_05955 f714f90bd3f10de02ea14aeacc041bf1 799 SUPERFAMILY SSF52540 389 722 3.76E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_05955 f714f90bd3f10de02ea14aeacc041bf1 799 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 11 241 1.2E-51 T 11-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AVL55_05955 f714f90bd3f10de02ea14aeacc041bf1 799 Pfam PF12846 AAA-like domain 437 692 5.8E-14 T 11-10-2018 AVL55_05955 f714f90bd3f10de02ea14aeacc041bf1 799 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 15 795 6.3E-213 T 11-10-2018 IPR014117 Type-IV secretion system protein TraC AVL55_05955 f714f90bd3f10de02ea14aeacc041bf1 799 Gene3D G3DSA:3.40.50.300 425 734 9.7E-56 T 11-10-2018 AVL55_05955 f714f90bd3f10de02ea14aeacc041bf1 799 Gene3D G3DSA:1.10.8.730 489 603 9.7E-56 T 11-10-2018 AVL55_06500 1e3c5f808fa791ad94e0b2e1565891b3 574 SUPERFAMILY SSF116726 292 358 3.01E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_06500 1e3c5f808fa791ad94e0b2e1565891b3 574 SUPERFAMILY SSF116726 204 284 8.11E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_06500 1e3c5f808fa791ad94e0b2e1565891b3 574 Pfam PF02080 TrkA-C domain 208 275 9.1E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AVL55_06500 1e3c5f808fa791ad94e0b2e1565891b3 574 Pfam PF02080 TrkA-C domain 294 354 1.2E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AVL55_06500 1e3c5f808fa791ad94e0b2e1565891b3 574 Gene3D G3DSA:3.30.70.1450 204 280 9.9E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_06500 1e3c5f808fa791ad94e0b2e1565891b3 574 Gene3D G3DSA:3.30.70.1450 291 362 2.0E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AVL55_06500 1e3c5f808fa791ad94e0b2e1565891b3 574 Pfam PF03600 Citrate transporter 19 520 8.5E-36 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AVL55_12345 68ffaa6ac28035c239c501476aa7f317 170 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_12345 68ffaa6ac28035c239c501476aa7f317 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 1.7E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_12345 68ffaa6ac28035c239c501476aa7f317 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 1.7E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_12345 68ffaa6ac28035c239c501476aa7f317 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 1.7E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_12345 68ffaa6ac28035c239c501476aa7f317 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 161 16.149 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_12345 68ffaa6ac28035c239c501476aa7f317 170 Pfam PF01252 Signal peptidase (SPase) II 18 154 8.7E-37 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_12345 68ffaa6ac28035c239c501476aa7f317 170 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 6.0E-41 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AVL55_19965 ae292e42c2cdb03983d223f28a0ad9eb 112 Gene3D G3DSA:1.10.10.10 2 107 1.5E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_19965 ae292e42c2cdb03983d223f28a0ad9eb 112 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 6 85 1.3E-15 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AVL55_19965 ae292e42c2cdb03983d223f28a0ad9eb 112 SUPERFAMILY SSF46767 5 86 4.71E-14 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AVL55_02075 9ed861eaa4a8332c12c7936b33042281 141 Pfam PF00581 Rhodanese-like domain 44 135 2.4E-20 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_02075 9ed861eaa4a8332c12c7936b33042281 141 SUPERFAMILY SSF52821 17 140 1.3E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_02075 9ed861eaa4a8332c12c7936b33042281 141 Gene3D G3DSA:3.40.250.10 22 141 6.1E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_02075 9ed861eaa4a8332c12c7936b33042281 141 SMART SM00450 40 138 1.4E-22 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_11185 97f3ca7d9a75eb51d03cb43cca7776c5 875 Pfam PF13009 Putative phage integrase 599 697 2.3E-11 T 11-10-2018 IPR024965 Putative phage integrase AVL55_11185 97f3ca7d9a75eb51d03cb43cca7776c5 875 SUPERFAMILY SSF56349 771 868 5.3E-9 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_11185 97f3ca7d9a75eb51d03cb43cca7776c5 875 Pfam PF00589 Phage integrase family 820 861 1.3E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AVL55_11185 97f3ca7d9a75eb51d03cb43cca7776c5 875 Gene3D G3DSA:1.10.443.10 726 874 7.1E-9 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AVL55_03180 bf9c17aba5d4c59df79e13f06ed3dd03 303 Pfam PF04381 Putative exonuclease, RdgC 1 297 1.3E-95 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AVL55_13940 4eec223ca1a2007cf11a29cac3ec012d 970 Pfam PF02687 FtsX-like permease family 870 958 1.9E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AVL55_01515 6427e102eca6e78decd6f948158ffccb 255 Pfam PF06439 Domain of Unknown Function (DUF1080) 63 253 1.6E-36 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 AVL55_01515 6427e102eca6e78decd6f948158ffccb 255 Gene3D G3DSA:2.60.120.560 21 255 3.5E-81 T 11-10-2018 AVL55_01895 e668614e3edaf48096c4e64e2343b2a4 66 Pfam PF11174 Protein of unknown function (DUF2970) 7 60 1.6E-20 T 11-10-2018 IPR021344 Protein of unknown function DUF2970 AVL55_14455 331c6b1fab82df5c58f7db08dbd766b1 427 SUPERFAMILY SSF53474 184 376 7.22E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_14455 331c6b1fab82df5c58f7db08dbd766b1 427 Pfam PF03283 Pectinacetylesterase 68 243 4.7E-17 T 11-10-2018 IPR004963 Pectinacetylesterase/NOTUM GO:0016787 Reactome: R-HSA-381426|Reactome: R-HSA-5362798|Reactome: R-HSA-8957275 AVL55_16360 2e0c76fdea1ae2cc220709105e0b01d3 111 SUPERFAMILY SSF46785 13 105 2.72E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_16360 2e0c76fdea1ae2cc220709105e0b01d3 111 Pfam PF01638 HxlR-like helix-turn-helix 23 104 5.3E-12 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AVL55_16360 2e0c76fdea1ae2cc220709105e0b01d3 111 Gene3D G3DSA:1.10.10.10 9 110 1.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_13155 6dad2f72cf2e7a5786e613e35949f46f 236 Gene3D G3DSA:3.40.50.300 4 235 2.7E-61 T 11-10-2018 AVL55_13155 6dad2f72cf2e7a5786e613e35949f46f 236 Pfam PF00005 ABC transporter 18 158 2.9E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_13155 6dad2f72cf2e7a5786e613e35949f46f 236 SUPERFAMILY SSF52540 8 221 2.02E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_13155 6dad2f72cf2e7a5786e613e35949f46f 236 SMART SM00382 26 207 3.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_12035 4fd63b212b9bae3c96acdd89d7c3d305 214 SUPERFAMILY SSF54427 133 206 2.08E-5 T 11-10-2018 IPR032710 NTF2-like domain superfamily AVL55_12035 4fd63b212b9bae3c96acdd89d7c3d305 214 PIRSF PIRSF028288 4 212 3.6E-47 T 11-10-2018 IPR016878 Uncharacterised conserved protein UCP028288 AVL55_12035 4fd63b212b9bae3c96acdd89d7c3d305 214 Gene3D G3DSA:3.10.450.50 54 212 2.5E-22 T 11-10-2018 AVL55_17335 be8c1bd7abd603d0306d34a393057a05 427 Gene3D G3DSA:3.40.50.2000 225 404 1.4E-25 T 11-10-2018 AVL55_17335 be8c1bd7abd603d0306d34a393057a05 427 Gene3D G3DSA:3.40.50.2000 6 224 2.1E-12 T 11-10-2018 AVL55_17335 be8c1bd7abd603d0306d34a393057a05 427 Pfam PF13439 Glycosyltransferase Family 4 78 221 1.7E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AVL55_17335 be8c1bd7abd603d0306d34a393057a05 427 Pfam PF00534 Glycosyl transferases group 1 232 399 4.7E-23 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_17335 be8c1bd7abd603d0306d34a393057a05 427 SUPERFAMILY SSF53756 10 400 1.2E-47 T 11-10-2018 AVL55_05965 3495a5e34dfbd2ae0d77edfab2922feb 139 ProSitePatterns PS00760 Signal peptidases I lysine active site. 56 68 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AVL55_05965 3495a5e34dfbd2ae0d77edfab2922feb 139 SUPERFAMILY SSF51306 41 139 4.81E-18 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AVL55_05965 3495a5e34dfbd2ae0d77edfab2922feb 139 Pfam PF10502 Signal peptidase, peptidase S26 49 139 2.1E-15 T 11-10-2018 IPR019533 Peptidase S26 AVL55_05965 3495a5e34dfbd2ae0d77edfab2922feb 139 Gene3D G3DSA:2.10.109.10 37 139 3.5E-14 T 11-10-2018 AVL55_18460 c00908a64e7370cf9789d9aa0d08c9ed 121 Gene3D G3DSA:3.30.56.110 3 121 7.7E-50 T 11-10-2018 AVL55_18460 c00908a64e7370cf9789d9aa0d08c9ed 121 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 7 119 9.2E-48 T 11-10-2018 IPR018714 Protein of unknown function DUF2237 AVL55_17115 a753c9de25d2c054bee42b22cbc6dc95 297 Gene3D G3DSA:3.40.190.10 164 242 7.5E-6 T 11-10-2018 AVL55_17115 a753c9de25d2c054bee42b22cbc6dc95 297 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 94 227 1.4E-6 T 11-10-2018 AVL55_17115 a753c9de25d2c054bee42b22cbc6dc95 297 SUPERFAMILY SSF53850 100 240 4.97E-8 T 11-10-2018 AVL55_10895 d793c6efa0ac46c4930dd7acad9b7335 149 Pfam PF07681 DoxX 19 105 7.0E-21 T 11-10-2018 IPR032808 DoxX family AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 4.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 4.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 4.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 4.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 4.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 SUPERFAMILY SSF56655 7 270 2.36E-74 T 11-10-2018 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 9 261 37.153 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 Gene3D G3DSA:3.40.190.80 157 264 3.8E-22 T 11-10-2018 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 11 259 1.5E-87 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 Gene3D G3DSA:3.30.540.10 5 155 1.3E-45 T 11-10-2018 AVL55_19420 65324f60990790e93e2d17ccda7234e3 281 Pfam PF00459 Inositol monophosphatase family 9 252 1.4E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AVL55_10100 5225cd852ff4ff162cdfb13b8f5b908a 686 Pfam PF06980 Protein of unknown function (DUF1302) 33 685 8.5E-184 T 11-10-2018 IPR010727 Protein of unknown function DUF1302 AVL55_14670 808ed2a8f19cf375fd99bb641fed2e23 184 Gene3D G3DSA:3.40.50.880 1 184 1.4E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_14670 808ed2a8f19cf375fd99bb641fed2e23 184 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 11 182 2.8E-48 T 11-10-2018 IPR006286 Deglycase PfpI AVL55_14670 808ed2a8f19cf375fd99bb641fed2e23 184 SUPERFAMILY SSF52317 9 182 1.68E-43 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_14670 808ed2a8f19cf375fd99bb641fed2e23 184 Pfam PF01965 DJ-1/PfpI family 10 180 6.3E-45 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AVL55_15485 6dbcaa9c0145abfad303242f85dedc2b 419 Pfam PF07690 Major Facilitator Superfamily 38 369 2.7E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_15485 6dbcaa9c0145abfad303242f85dedc2b 419 Gene3D G3DSA:1.20.1250.20 31 410 8.2E-43 T 11-10-2018 AVL55_15485 6dbcaa9c0145abfad303242f85dedc2b 419 SUPERFAMILY SSF103473 16 404 8.24E-54 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_16150 f716ac4b9f0ac713afb4ab30d1e8bbe8 396 SUPERFAMILY SSF50952 31 386 1.7E-40 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AVL55_16150 f716ac4b9f0ac713afb4ab30d1e8bbe8 396 Pfam PF07995 Glucose / Sorbosone dehydrogenase 56 391 6.1E-123 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AVL55_16150 f716ac4b9f0ac713afb4ab30d1e8bbe8 396 Gene3D G3DSA:2.120.10.30 44 394 7.7E-104 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_01885 0cb8bb5c0a659de900d76b17193cfb80 245 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 30 215 6.3E-24 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AVL55_01885 0cb8bb5c0a659de900d76b17193cfb80 245 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 241 3.1E-44 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AVL55_16375 70d83394acbf8a9a101932e897d0e401 116 Pfam PF05717 IS66 Orf2 like protein 9 103 1.8E-38 T 11-10-2018 IPR008878 Transposase IS66, Orf2 AVL55_01205 27629b5747c42f9b5c7fc8b9cfefab40 377 Pfam PF04055 Radical SAM superfamily 40 199 6.1E-8 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_01205 27629b5747c42f9b5c7fc8b9cfefab40 377 Gene3D G3DSA:3.20.20.70 26 261 6.6E-16 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_01205 27629b5747c42f9b5c7fc8b9cfefab40 377 Pfam PF13394 4Fe-4S single cluster domain 40 105 2.2E-5 T 11-10-2018 AVL55_01205 27629b5747c42f9b5c7fc8b9cfefab40 377 SUPERFAMILY SSF102114 39 247 4.32E-16 T 11-10-2018 AVL55_01560 9a43071cc03d806ee6da9b06eda887db 153 SUPERFAMILY SSF51182 4 142 1.93E-42 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_01560 9a43071cc03d806ee6da9b06eda887db 153 Pfam PF06172 Cupin superfamily (DUF985) 5 132 1.3E-39 T 11-10-2018 IPR009327 Cupin domain of unknown function DUF985 AVL55_01560 9a43071cc03d806ee6da9b06eda887db 153 Gene3D G3DSA:2.60.120.10 1 150 2.3E-42 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_10830 017d9b99a0d35fc15e62dafae41b65dc 230 Pfam PF03942 DTW domain 24 206 1.7E-38 T 11-10-2018 IPR005636 DTW AVL55_10830 017d9b99a0d35fc15e62dafae41b65dc 230 SMART SM01144 21 213 1.6E-59 T 11-10-2018 IPR005636 DTW AVL55_17820 628cd5407748e29a4c54db885e8c4453 147 SMART SM00530 56 110 0.0075 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_17820 628cd5407748e29a4c54db885e8c4453 147 Gene3D G3DSA:1.10.260.40 9 110 6.3E-15 T 11-10-2018 AVL55_17820 628cd5407748e29a4c54db885e8c4453 147 SUPERFAMILY SSF47413 56 95 1.69E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AVL55_17820 628cd5407748e29a4c54db885e8c4453 147 Pfam PF01381 Helix-turn-helix 60 92 2.4E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AVL55_11615 4c279c549f2741452250568673d4bbd8 219 Pfam PF01794 Ferric reductase like transmembrane component 54 167 7.7E-16 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AVL55_11615 4c279c549f2741452250568673d4bbd8 219 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 14 207 19.12 T 11-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AVL55_05470 443139928ebf2504bf142f5521052b22 253 Pfam PF11932 Protein of unknown function (DUF3450) 11 250 1.6E-91 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AVL55_05470 443139928ebf2504bf142f5521052b22 253 PIRSF PIRSF028069 4 253 4.8E-90 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AVL55_01930 c2528cad12f383e63619a980483b7227 203 PIRSF PIRSF016482 4 203 9.2E-58 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AVL55_01930 c2528cad12f383e63619a980483b7227 203 Gene3D G3DSA:3.30.70.60 99 201 1.6E-35 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AVL55_01930 c2528cad12f383e63619a980483b7227 203 Pfam PF04350 Pilus assembly protein, PilO 57 192 8.1E-52 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AVL55_01930 c2528cad12f383e63619a980483b7227 203 Gene3D G3DSA:1.10.287.540 62 98 2.9E-7 T 11-10-2018 AVL55_13720 655aec72824468274d503ff4921f84fa 540 SUPERFAMILY SSF58104 235 536 4.05E-57 T 11-10-2018 AVL55_13720 655aec72824468274d503ff4921f84fa 540 SMART SM00283 279 539 7.4E-53 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_13720 655aec72824468274d503ff4921f84fa 540 Gene3D G3DSA:1.10.287.950 248 540 5.3E-54 T 11-10-2018 AVL55_13720 655aec72824468274d503ff4921f84fa 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 504 1.1E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_19670 1dd654dc5fe95ebb2c2d590468aa670e 663 Pfam PF00326 Prolyl oligopeptidase family 442 647 1.0E-40 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AVL55_19670 1dd654dc5fe95ebb2c2d590468aa670e 663 SUPERFAMILY SSF53474 400 647 4.42E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_19670 1dd654dc5fe95ebb2c2d590468aa670e 663 Gene3D G3DSA:3.40.50.1820 376 661 3.0E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_19670 1dd654dc5fe95ebb2c2d590468aa670e 663 SUPERFAMILY SSF82171 44 388 2.22E-15 T 11-10-2018 AVL55_19670 1dd654dc5fe95ebb2c2d590468aa670e 663 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 451 475 2.4E-5 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_19670 1dd654dc5fe95ebb2c2d590468aa670e 663 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 563 578 2.4E-5 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_19670 1dd654dc5fe95ebb2c2d590468aa670e 663 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 425 443 2.4E-5 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_19670 1dd654dc5fe95ebb2c2d590468aa670e 663 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 509 529 2.4E-5 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AVL55_12675 91e5d420af2c332e9b6ae61bd8c258ba 114 SUPERFAMILY SSF54593 8 111 1.3E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_12675 91e5d420af2c332e9b6ae61bd8c258ba 114 Gene3D G3DSA:3.10.180.10 3 113 1.8E-13 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AVL55_13500 1955184a868f2c4c088259b9bac05702 130 SUPERFAMILY SSF54523 17 119 9.42E-6 T 11-10-2018 AVL55_13500 1955184a868f2c4c088259b9bac05702 130 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 32 1.5E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_00260 74e8a839f2e7093873466a1ef4767e4c 249 Pfam PF06251 Capsule biosynthesis GfcC 26 245 3.4E-40 T 11-10-2018 IPR010425 Domain of unknown function DUF1017 AVL55_00260 74e8a839f2e7093873466a1ef4767e4c 249 Gene3D G3DSA:3.10.560.10 147 220 3.6E-16 T 11-10-2018 AVL55_07295 e0612d8c7ff7eafc0a53dd758bbc0156 206 SUPERFAMILY SSF55821 1 204 6.41E-62 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AVL55_07295 e0612d8c7ff7eafc0a53dd758bbc0156 206 Gene3D G3DSA:3.90.870.10 1 205 4.0E-66 T 11-10-2018 AVL55_07295 e0612d8c7ff7eafc0a53dd758bbc0156 206 Pfam PF01300 Telomere recombination 22 198 1.7E-46 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AVL55_07295 e0612d8c7ff7eafc0a53dd758bbc0156 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.6E-69 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AVL55_11270 1a8ded1fb67606a7133e2f549e166e2b 117 Gene3D G3DSA:3.40.30.10 1 117 1.8E-47 T 11-10-2018 AVL55_11270 1a8ded1fb67606a7133e2f549e166e2b 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 2.3E-46 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AVL55_11270 1a8ded1fb67606a7133e2f549e166e2b 117 Pfam PF03960 ArsC family 11 116 2.2E-17 T 11-10-2018 IPR006660 Arsenate reductase-like AVL55_11270 1a8ded1fb67606a7133e2f549e166e2b 117 SUPERFAMILY SSF52833 3 116 6.5E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_12725 4d37faeea3124deaf7405d1371786b58 174 SUPERFAMILY SSF52499 3 172 7.33E-41 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AVL55_12725 4d37faeea3124deaf7405d1371786b58 174 Gene3D G3DSA:3.40.50.850 2 174 5.5E-36 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AVL55_12725 4d37faeea3124deaf7405d1371786b58 174 Pfam PF00857 Isochorismatase family 5 170 5.0E-30 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AVL55_18725 f4af6bc16f4f145c2d954028a51e0a67 526 PIRSF PIRSF006446 1 516 1.8E-145 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AVL55_18725 f4af6bc16f4f145c2d954028a51e0a67 526 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 2.4E-176 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AVL55_15675 e8ead76cb79d14fb559979d74e0ef5b9 362 Gene3D G3DSA:3.40.50.2000 152 348 4.6E-49 T 11-10-2018 AVL55_15675 e8ead76cb79d14fb559979d74e0ef5b9 362 Pfam PF00534 Glycosyl transferases group 1 177 339 4.9E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_15675 e8ead76cb79d14fb559979d74e0ef5b9 362 SUPERFAMILY SSF53756 54 361 7.46E-55 T 11-10-2018 AVL55_04710 21ffeb4c10496af2d2054073c411f013 231 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 166 183 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AVL55_04710 21ffeb4c10496af2d2054073c411f013 231 Pfam PF01255 Putative undecaprenyl diphosphate synthase 1 220 1.0E-81 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AVL55_04710 21ffeb4c10496af2d2054073c411f013 231 SUPERFAMILY SSF64005 1 216 3.01E-81 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AVL55_04710 21ffeb4c10496af2d2054073c411f013 231 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 220 9.4E-95 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AVL55_04710 21ffeb4c10496af2d2054073c411f013 231 Gene3D G3DSA:3.40.1180.10 1 221 5.8E-87 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AVL55_04710 21ffeb4c10496af2d2054073c411f013 231 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 221 36.041 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AVL55_06515 cec114c11c25e53076af938124ef4047 198 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 38.269 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AVL55_06515 cec114c11c25e53076af938124ef4047 198 Pfam PF01583 Adenylylsulphate kinase 27 177 3.6E-74 T 11-10-2018 AVL55_06515 cec114c11c25e53076af938124ef4047 198 Gene3D G3DSA:3.40.50.300 2 198 6.8E-81 T 11-10-2018 AVL55_06515 cec114c11c25e53076af938124ef4047 198 SUPERFAMILY SSF52540 24 195 5.1E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06515 cec114c11c25e53076af938124ef4047 198 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 191 1.0E-81 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AVL55_14650 8232ecc6304907cb298650f256a69d15 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 5.4E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AVL55_14650 8232ecc6304907cb298650f256a69d15 289 Gene3D G3DSA:1.10.3720.10 58 266 4.0E-11 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_14650 8232ecc6304907cb298650f256a69d15 289 SUPERFAMILY SSF161098 66 254 4.09E-17 T 11-10-2018 IPR035906 MetI-like superfamily AVL55_02095 c36872dc0cec80a8b8096b5c9cbbb18d 230 Gene3D G3DSA:3.20.20.190 1 230 3.8E-58 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AVL55_02095 c36872dc0cec80a8b8096b5c9cbbb18d 230 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 222 7.6E-32 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AVL55_02095 c36872dc0cec80a8b8096b5c9cbbb18d 230 SUPERFAMILY SSF51695 1 228 2.15E-55 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AVL55_01240 53ced796e99d21acc04eba1fa839a7a9 136 SMART SM00422 1 69 4.4E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_01240 53ced796e99d21acc04eba1fa839a7a9 136 SUPERFAMILY SSF46955 1 114 2.45E-27 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_01240 53ced796e99d21acc04eba1fa839a7a9 136 Pfam PF00376 MerR family regulatory protein 3 38 6.6E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_01240 53ced796e99d21acc04eba1fa839a7a9 136 Gene3D G3DSA:1.10.1660.10 1 122 1.9E-28 T 11-10-2018 AVL55_01240 53ced796e99d21acc04eba1fa839a7a9 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 2.8E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_01240 53ced796e99d21acc04eba1fa839a7a9 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.8E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AVL55_01240 53ced796e99d21acc04eba1fa839a7a9 136 Pfam PF09278 MerR, DNA binding 43 105 2.2E-16 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AVL55_17250 49bc6faa91492ef4d51636d6cef992e0 215 Pfam PF03692 Putative zinc- or iron-chelating domain 33 116 5.2E-8 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AVL55_08065 93412e4ad6f54634612dd4c88bc5e74f 208 Pfam PF02517 CAAX protease self-immunity 103 191 2.0E-11 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AVL55_06005 37f4f0c26b022c9e469633fcba3e94fe 59 SUPERFAMILY SSF47598 5 48 4.08E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AVL55_02260 360e2314a68de29f51fdf1c8eab69fcf 393 SUPERFAMILY SSF50952 51 391 3.01E-49 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AVL55_02260 360e2314a68de29f51fdf1c8eab69fcf 393 Gene3D G3DSA:2.120.10.30 46 393 2.3E-115 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AVL55_02260 360e2314a68de29f51fdf1c8eab69fcf 393 Pfam PF07995 Glucose / Sorbosone dehydrogenase 62 389 6.4E-127 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AVL55_11695 702b68538ddc7b765bf6c8d78c47a2e8 157 Pfam PF02391 MoaE protein 17 123 6.3E-28 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AVL55_11695 702b68538ddc7b765bf6c8d78c47a2e8 157 SUPERFAMILY SSF54690 5 153 3.53E-43 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AVL55_11695 702b68538ddc7b765bf6c8d78c47a2e8 157 Gene3D G3DSA:3.90.1170.40 3 153 2.2E-41 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AVL55_15470 8c6de95df46be5e6f6d72adb17281e08 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 107 2.1E-10 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AVL55_00980 8f7c739ef273c84e811912b5990ffd22 467 Pfam PF13353 4Fe-4S single cluster domain 98 180 1.4E-5 T 11-10-2018 AVL55_00980 8f7c739ef273c84e811912b5990ffd22 467 SUPERFAMILY SSF102114 89 415 1.44E-26 T 11-10-2018 AVL55_00980 8f7c739ef273c84e811912b5990ffd22 467 Gene3D G3DSA:3.20.20.70 88 457 2.0E-44 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_00980 8f7c739ef273c84e811912b5990ffd22 467 Pfam PF04055 Radical SAM superfamily 94 242 4.8E-8 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AVL55_00980 8f7c739ef273c84e811912b5990ffd22 467 TIGRFAM TIGR03978 rSAM_paired_1: His-Xaa-Ser system radical SAM maturase HxsB 7 465 1.4E-133 T 11-10-2018 IPR024023 His-Xaa-Ser system radical SAM maturase HxsB AVL55_07340 54b01a27082bcbc8e49f704b647e6a70 118 Pfam PF04355 SmpA / OmlA family 31 102 4.7E-25 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AVL55_07340 54b01a27082bcbc8e49f704b647e6a70 118 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 110 27.39 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE AVL55_07340 54b01a27082bcbc8e49f704b647e6a70 118 Gene3D G3DSA:3.30.1450.10 30 115 3.1E-24 T 11-10-2018 IPR037873 BamE-like AVL55_18670 cafa9979b8274a2834dfec6ff70ad6e9 267 SMART SM00382 58 247 9.8E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AVL55_18670 cafa9979b8274a2834dfec6ff70ad6e9 267 Gene3D G3DSA:3.40.50.300 29 266 6.1E-59 T 11-10-2018 AVL55_18670 cafa9979b8274a2834dfec6ff70ad6e9 267 Pfam PF00005 ABC transporter 54 201 6.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AVL55_18670 cafa9979b8274a2834dfec6ff70ad6e9 267 SUPERFAMILY SSF52540 28 244 9.02E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 PRINTS PR00481 Cytosol aminopeptidase signature 209 230 7.8E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 PRINTS PR00481 Cytosol aminopeptidase signature 268 288 7.8E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 PRINTS PR00481 Cytosol aminopeptidase signature 187 204 7.8E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 PRINTS PR00481 Cytosol aminopeptidase signature 246 267 7.8E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 PRINTS PR00481 Cytosol aminopeptidase signature 296 311 7.8E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 Pfam PF12404 Peptidase 5 79 2.3E-23 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 SUPERFAMILY SSF53187 102 424 1.29E-98 T 11-10-2018 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 272 279 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 106 418 8.8E-99 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 Gene3D G3DSA:3.40.630.10 91 425 3.7E-104 T 11-10-2018 AVL55_17965 844cd111b8d49c5bae8929de32c898bf 427 PIRSF PIRSF036388 1 427 1.3E-175 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AVL55_03150 75b324a96ca0ae5435ddbe10687e928f 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 2.4E-74 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AVL55_03150 75b324a96ca0ae5435ddbe10687e928f 266 Pfam PF02673 Bacitracin resistance protein BacA 7 259 5.0E-83 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AVL55_03150 75b324a96ca0ae5435ddbe10687e928f 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.792 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AVL55_15725 5ea21650f4fa811668e491eaca1a0f93 754 SUPERFAMILY SSF56935 38 733 2.24E-101 T 11-10-2018 AVL55_15725 5ea21650f4fa811668e491eaca1a0f93 754 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 170 2.7E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_15725 5ea21650f4fa811668e491eaca1a0f93 754 Gene3D G3DSA:2.40.170.20 53 754 1.2E-114 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_15725 5ea21650f4fa811668e491eaca1a0f93 754 Pfam PF00593 TonB dependent receptor 293 728 1.0E-24 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_14015 a49c69c8d3e758d24389dd40786f4149 362 Pfam PF13480 Acetyltransferase (GNAT) domain 177 324 2.3E-18 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AVL55_14015 a49c69c8d3e758d24389dd40786f4149 362 SUPERFAMILY SSF55729 172 338 1.8E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_09335 b82ec890ac4accd85a048d8bdb1dea1b 176 Pfam PF11086 Protein of unknown function (DUF2878) 9 161 5.9E-39 T 11-10-2018 IPR021306 Protein of unknown function DUF2878 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 SUPERFAMILY SSF81442 23 529 4.06E-159 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 Gene3D G3DSA:1.20.120.80 648 828 1.0E-6 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 33 477 7.2E-139 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 24 528 5.7E-213 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 Gene3D G3DSA:1.20.210.10 8 536 3.5E-180 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 69 92 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 402 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 296 311 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 355 373 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 138 150 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 170 188 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 250 271 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 22 47 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 341 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 433 454 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 PRINTS PR01165 Cytochrome c oxidase subunit I signature 199 218 3.8E-79 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 252 306 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_16575 fd27536a6083f55ae130403c6922f59f 835 SUPERFAMILY SSF81452 573 817 9.03E-11 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AVL55_01350 b20be53a2e7c44132b15268f66f5df05 163 Pfam PF04214 Protein of unknown function, DUF 62 129 3.3E-26 T 11-10-2018 IPR007332 Protein of unknown function DUF411 AVL55_01350 b20be53a2e7c44132b15268f66f5df05 163 SUPERFAMILY SSF52833 29 108 3.76E-5 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_04510 060f6ab28e695fa952dec9df128de692 165 Gene3D G3DSA:1.10.8.640 37 122 1.1E-33 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AVL55_04510 060f6ab28e695fa952dec9df128de692 165 Pfam PF03918 Cytochrome C biogenesis protein 25 148 1.2E-46 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AVL55_07250 84da3b4cc7c8b9d99207d3bfc86a4648 154 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 6 139 5.2E-28 T 11-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain AVL55_07250 84da3b4cc7c8b9d99207d3bfc86a4648 154 Gene3D G3DSA:2.30.110.10 2 139 1.1E-32 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AVL55_07250 84da3b4cc7c8b9d99207d3bfc86a4648 154 SUPERFAMILY SSF50475 5 128 1.15E-21 T 11-10-2018 AVL55_19830 5739c6c91260044b4045a66b366bf8fd 870 Pfam PF04411 PD-(D/E)XK nuclease superfamily 421 616 1.1E-40 T 11-10-2018 IPR007505 PD-(D/E)XK nuclease superfamily 7 AVL55_19830 5739c6c91260044b4045a66b366bf8fd 870 Pfam PF09823 Domain of unknown function (DUF2357) 152 398 8.1E-71 T 11-10-2018 IPR018633 Domain of unknown function DUF2357 AVL55_08585 fde03f6135030711a16b6fe9fbdc3524 183 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 3 183 4.7E-57 T 11-10-2018 IPR018636 Protein of unknown function DUF2058 AVL55_17345 ed7e1d3dbac44251a889bcc039d4ac97 337 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 17 205 3.1E-6 T 11-10-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain AVL55_05025 b96ea5bae3ec709773314a44d0ddccc8 381 Pfam PF13692 Glycosyl transferases group 1 199 312 2.1E-9 T 11-10-2018 AVL55_05025 b96ea5bae3ec709773314a44d0ddccc8 381 SUPERFAMILY SSF53756 5 375 1.31E-17 T 11-10-2018 AVL55_05025 b96ea5bae3ec709773314a44d0ddccc8 381 Gene3D G3DSA:3.40.50.2000 185 331 7.9E-13 T 11-10-2018 AVL55_11485 dd3135ce4dab608eacc7f77f5616ec31 102 SUPERFAMILY SSF81296 13 98 7.0E-15 T 11-10-2018 IPR014756 Immunoglobulin E-set AVL55_11485 dd3135ce4dab608eacc7f77f5616ec31 102 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 26 77 2.3E-7 T 11-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 AVL55_11485 dd3135ce4dab608eacc7f77f5616ec31 102 Gene3D G3DSA:2.60.40.10 3 96 1.0E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_07985 ed2e03168d943934114acee12f280714 120 Pfam PF01627 Hpt domain 35 113 3.7E-9 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_07985 ed2e03168d943934114acee12f280714 120 SUPERFAMILY SSF47226 4 119 6.28E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_07985 ed2e03168d943934114acee12f280714 120 Gene3D G3DSA:1.20.120.160 11 120 8.6E-19 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_10280 4e1248c82925fe90cbe51c6dcb96b78c 380 SUPERFAMILY SSF52540 108 372 5.65E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_10280 4e1248c82925fe90cbe51c6dcb96b78c 380 Gene3D G3DSA:3.40.50.300 106 377 1.8E-56 T 11-10-2018 AVL55_10280 4e1248c82925fe90cbe51c6dcb96b78c 380 Pfam PF13614 AAA domain 108 287 5.7E-35 T 11-10-2018 IPR025669 AAA domain AVL55_10280 4e1248c82925fe90cbe51c6dcb96b78c 380 SUPERFAMILY SSF46955 34 86 5.04E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AVL55_17350 201fc9967f34e42a491e33f418674cc1 358 Gene3D G3DSA:3.90.1480.20 128 298 8.8E-9 T 11-10-2018 IPR038578 GT29-like superfamiliy Reactome: R-HSA-4085001 AVL55_17350 201fc9967f34e42a491e33f418674cc1 358 Pfam PF00777 Glycosyltransferase family 29 (sialyltransferase) 175 244 1.4E-4 T 11-10-2018 IPR001675 Glycosyl transferase family 29 GO:0006486|GO:0008373 Reactome: R-HSA-4085001 AVL55_06625 f161df4b64439124d7412ec4e946b1b6 263 Pfam PF01578 Cytochrome C assembly protein 39 263 3.6E-33 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AVL55_02825 bcb8596acc5e45f25257153c11ef25a9 465 Pfam PF02321 Outer membrane efflux protein 24 219 9.1E-30 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_02825 bcb8596acc5e45f25257153c11ef25a9 465 Pfam PF02321 Outer membrane efflux protein 244 442 8.7E-34 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_02825 bcb8596acc5e45f25257153c11ef25a9 465 Gene3D G3DSA:1.20.1600.10 21 464 4.0E-128 T 11-10-2018 AVL55_02825 bcb8596acc5e45f25257153c11ef25a9 465 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 454 5.6E-117 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AVL55_02825 bcb8596acc5e45f25257153c11ef25a9 465 SUPERFAMILY SSF56954 1 444 6.54E-96 T 11-10-2018 AVL55_12420 398a5e8e098085bc3b89b051159648dc 197 Gene3D G3DSA:2.70.40.10 1 162 2.2E-52 T 11-10-2018 IPR036157 dUTPase-like superfamily AVL55_12420 398a5e8e098085bc3b89b051159648dc 197 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 34.101 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AVL55_12420 398a5e8e098085bc3b89b051159648dc 197 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 6.9E-68 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AVL55_12420 398a5e8e098085bc3b89b051159648dc 197 Pfam PF00692 dUTPase 75 185 7.8E-10 T 11-10-2018 IPR029054 dUTPase-like AVL55_12420 398a5e8e098085bc3b89b051159648dc 197 SUPERFAMILY SSF51283 1 191 3.57E-59 T 11-10-2018 IPR036157 dUTPase-like superfamily AVL55_17035 cc0e4fdabcdd8289e16b0047aed425ae 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.6E-21 T 11-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM AVL55_08040 be2937c02f25cfaf1bc10c07a5a0beac 272 Pfam PF01925 Sulfite exporter TauE/SafE 15 266 1.2E-47 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AVL55_07480 12d550f952ba648913b1823003ca1166 149 Gene3D G3DSA:2.60.40.790 34 143 2.1E-26 T 11-10-2018 IPR008978 HSP20-like chaperone AVL55_07480 12d550f952ba648913b1823003ca1166 149 Pfam PF00011 Hsp20/alpha crystallin family 45 142 1.4E-21 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AVL55_07480 12d550f952ba648913b1823003ca1166 149 SUPERFAMILY SSF49764 8 142 4.88E-25 T 11-10-2018 IPR008978 HSP20-like chaperone AVL55_19435 9cf3d214b7226b5b10a6ce55e135479b 541 Gene3D G3DSA:2.70.98.10 58 430 8.9E-147 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AVL55_19435 9cf3d214b7226b5b10a6ce55e135479b 541 PIRSF PIRSF006281 13 541 6.9E-168 T 11-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD AVL55_19435 9cf3d214b7226b5b10a6ce55e135479b 541 SUPERFAMILY SSF81296 431 540 7.56E-21 T 11-10-2018 IPR014756 Immunoglobulin E-set AVL55_19435 9cf3d214b7226b5b10a6ce55e135479b 541 SUPERFAMILY SSF74650 61 428 3.45E-132 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AVL55_19435 9cf3d214b7226b5b10a6ce55e135479b 541 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 60 538 1.8E-179 T 11-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AVL55_19435 9cf3d214b7226b5b10a6ce55e135479b 541 Gene3D G3DSA:2.60.40.10 432 541 3.4E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_00265 4d5feb956350fd5fbf3fa27e9f90a297 700 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 35 693 3.4E-233 T 11-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH AVL55_04565 754db26c9d928763b71907280270ab71 610 Gene3D G3DSA:3.10.560.10 502 580 5.7E-10 T 11-10-2018 AVL55_04565 754db26c9d928763b71907280270ab71 610 Pfam PF02563 Polysaccharide biosynthesis/export protein 131 204 5.1E-12 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AVL55_04565 754db26c9d928763b71907280270ab71 610 Gene3D G3DSA:3.30.1950.10 137 208 6.8E-15 T 11-10-2018 AVL55_04565 754db26c9d928763b71907280270ab71 610 Gene3D G3DSA:3.10.560.10 131 293 6.8E-15 T 11-10-2018 AVL55_06565 f32f7528e5e54fb1b6220a1a7b97665e 220 Pfam PF14316 Domain of unknown function (DUF4381) 43 185 2.2E-37 T 11-10-2018 IPR025489 Protein of unknown function (DUF4381 AVL55_15690 dff12b1dbc27811121db5b695405d76c 453 Gene3D G3DSA:1.20.1720.10 1 200 7.4E-41 T 11-10-2018 AVL55_15690 dff12b1dbc27811121db5b695405d76c 453 Pfam PF07690 Major Facilitator Superfamily 3 386 1.1E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_15690 dff12b1dbc27811121db5b695405d76c 453 Gene3D G3DSA:1.20.1250.20 234 437 3.1E-10 T 11-10-2018 AVL55_15690 dff12b1dbc27811121db5b695405d76c 453 SUPERFAMILY SSF103473 2 434 5.49E-48 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_14145 2b8f1be20b995de5e3b4bf3374a3da3a 522 Pfam PF02706 Chain length determinant protein 9 97 3.4E-7 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AVL55_14145 2b8f1be20b995de5e3b4bf3374a3da3a 522 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 10 511 4.1E-156 T 11-10-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant AVL55_08175 62a73a21e8df10a51a91763377b677c3 440 Pfam PF04932 O-Antigen ligase 208 361 2.0E-8 T 11-10-2018 IPR007016 O-antigen ligase-related AVL55_00115 ce0847617c813887302a7af104f81acb 158 Pfam PF04361 Protein of unknown function (DUF494) 1 158 6.9E-62 T 11-10-2018 IPR007456 Smg AVL55_00115 ce0847617c813887302a7af104f81acb 158 Hamap MF_00598 Protein Smg [smg]. 1 158 32.266 T 11-10-2018 IPR007456 Smg AVL55_03010 1daaefd0f151c49ced47ec99c05df675 406 Pfam PF13372 Alginate export 68 273 4.2E-13 T 11-10-2018 IPR025388 Alginate export domain AVL55_14235 4b9e16874e96aacccc44859cbb24a19e 306 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 305 7.2E-120 T 11-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B AVL55_14235 4b9e16874e96aacccc44859cbb24a19e 306 Pfam PF12706 Beta-lactamase superfamily domain 50 273 4.8E-41 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_14235 4b9e16874e96aacccc44859cbb24a19e 306 Gene3D G3DSA:3.60.15.10 1 306 1.1E-85 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_14235 4b9e16874e96aacccc44859cbb24a19e 306 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 306 141.664 T 11-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B AVL55_14235 4b9e16874e96aacccc44859cbb24a19e 306 SUPERFAMILY SSF56281 1 306 8.39E-55 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_03440 fd4e3c5c39ff4ee1a61c138fd3a717c4 247 Pfam PF12261 Thermostable hemolysin 34 204 8.8E-47 T 11-10-2018 IPR022050 Thermostable hemolysin AVL55_03060 e7984341d4e52cd05b817b486745c9e1 291 SUPERFAMILY SSF51556 8 289 7.26E-29 T 11-10-2018 IPR032466 Metal-dependent hydrolase AVL55_03060 e7984341d4e52cd05b817b486745c9e1 291 Pfam PF04909 Amidohydrolase 9 290 3.0E-16 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AVL55_03060 e7984341d4e52cd05b817b486745c9e1 291 Gene3D G3DSA:3.20.20.140 6 291 7.8E-51 T 11-10-2018 AVL55_03495 19ff85976b61bce8bfb31aa47e1de07b 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.2E-45 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AVL55_03495 19ff85976b61bce8bfb31aa47e1de07b 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.099 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AVL55_03495 19ff85976b61bce8bfb31aa47e1de07b 130 SUPERFAMILY SSF54211 5 130 1.29E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AVL55_03495 19ff85976b61bce8bfb31aa47e1de07b 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AVL55_03495 19ff85976b61bce8bfb31aa47e1de07b 130 Gene3D G3DSA:3.30.230.10 1 130 2.3E-53 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AVL55_17740 b6bf0c66f512752c9d642f26e736154b 356 Pfam PF03929 PepSY-associated TM region 6 353 6.2E-53 T 11-10-2018 IPR005625 PepSY-associated TM protein AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 Gene3D G3DSA:3.40.710.10 18 278 1.1E-92 T 11-10-2018 AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 4.7E-22 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 SMART SM00936 280 370 2.4E-31 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 5.4E-87 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 SUPERFAMILY SSF56601 10 280 3.7E-83 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 6.2E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 6.2E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 6.2E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 SUPERFAMILY SSF69189 280 372 6.47E-24 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AVL55_09200 e63ff553080e9630f3edb2a940d70ac0 390 Gene3D G3DSA:2.60.410.10 280 370 4.3E-26 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AVL55_18630 dbf8d6678725e345a06a09b511ba5ac7 376 Pfam PF03929 PepSY-associated TM region 11 364 1.6E-43 T 11-10-2018 IPR005625 PepSY-associated TM protein AVL55_03310 211bf3e4d055395459c40c76d95b1d72 674 SMART SM00283 412 673 6.6E-63 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_03310 211bf3e4d055395459c40c76d95b1d72 674 SMART SM00304 345 397 1.5E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AVL55_03310 211bf3e4d055395459c40c76d95b1d72 674 Gene3D G3DSA:1.10.287.950 344 674 3.4E-73 T 11-10-2018 AVL55_03310 211bf3e4d055395459c40c76d95b1d72 674 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 126 3.7E-9 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AVL55_03310 211bf3e4d055395459c40c76d95b1d72 674 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 482 637 3.2E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AVL55_03310 211bf3e4d055395459c40c76d95b1d72 674 SUPERFAMILY SSF58104 365 674 4.71E-73 T 11-10-2018 AVL55_11255 ff568482c6b1aff4460244a0cf16787d 357 Pfam PF01594 AI-2E family transporter 20 345 6.5E-66 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AVL55_03045 7ad6e7530a44085aba2f87daf1fff7e0 181 Pfam PF11454 Protein of unknown function (DUF3016) 28 170 4.2E-45 T 11-10-2018 IPR021557 Protein of unknown function DUF3016 AVL55_18790 b4ac584e32003dcf732bdb84188010d4 370 SUPERFAMILY SSF103473 5 368 5.49E-40 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_18790 b4ac584e32003dcf732bdb84188010d4 370 Gene3D G3DSA:1.20.1250.20 1 368 3.8E-39 T 11-10-2018 AVL55_18790 b4ac584e32003dcf732bdb84188010d4 370 Pfam PF07690 Major Facilitator Superfamily 3 273 1.4E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_01925 220779b25fcf80015e50dff4238bbe6f 175 PIRSF PIRSF016481 2 173 1.9E-35 T 11-10-2018 IPR007446 Pilus assembly protein PilP AVL55_01925 220779b25fcf80015e50dff4238bbe6f 175 Pfam PF04351 Pilus assembly protein, PilP 23 167 2.6E-44 T 11-10-2018 IPR007446 Pilus assembly protein PilP AVL55_01925 220779b25fcf80015e50dff4238bbe6f 175 Gene3D G3DSA:2.30.30.830 77 169 5.3E-23 T 11-10-2018 AVL55_09305 5d2e7a625bd7aec9ec1f688910864685 137 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 9.0E-38 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AVL55_09305 5d2e7a625bd7aec9ec1f688910864685 137 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 9.0E-38 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AVL55_09305 5d2e7a625bd7aec9ec1f688910864685 137 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 9.0E-38 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AVL55_09305 5d2e7a625bd7aec9ec1f688910864685 137 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 9.0E-38 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AVL55_09305 5d2e7a625bd7aec9ec1f688910864685 137 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 74 5.5E-26 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AVL55_09305 5d2e7a625bd7aec9ec1f688910864685 137 Pfam PF03840 Preprotein translocase SecG subunit 5 73 1.7E-21 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AVL55_05490 434ba5b1a3c87005fabcb57f59b092a0 203 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 124 199 2.1E-18 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AVL55_05490 434ba5b1a3c87005fabcb57f59b092a0 203 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 124 196 3.8E-18 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AVL55_05490 434ba5b1a3c87005fabcb57f59b092a0 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 118 139 8.1E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_05490 434ba5b1a3c87005fabcb57f59b092a0 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 61 71 8.1E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_05490 434ba5b1a3c87005fabcb57f59b092a0 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 175 8.1E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_05490 434ba5b1a3c87005fabcb57f59b092a0 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 157 8.1E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AVL55_05490 434ba5b1a3c87005fabcb57f59b092a0 203 SUPERFAMILY SSF74653 114 193 1.12E-25 T 11-10-2018 AVL55_05490 434ba5b1a3c87005fabcb57f59b092a0 203 Gene3D G3DSA:3.30.1150.10 105 202 1.4E-28 T 11-10-2018 AVL55_09650 f19c3e15aeb037d9de4fb923d8c61c72 169 SUPERFAMILY SSF75217 5 145 2.62E-26 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AVL55_09650 f19c3e15aeb037d9de4fb923d8c61c72 169 Gene3D G3DSA:3.40.1280.10 10 151 1.9E-18 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AVL55_09650 f19c3e15aeb037d9de4fb923d8c61c72 169 Pfam PF00588 SpoU rRNA Methylase family 8 141 9.2E-17 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AVL55_16900 8b2cebbba992920d5c6d26b03c6cb586 136 Gene3D G3DSA:3.30.420.270 62 130 1.9E-8 T 11-10-2018 AVL55_16900 8b2cebbba992920d5c6d26b03c6cb586 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 134 1.5E-31 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AVL55_12245 822dbb8c0e2fb3f8c922f57792582048 134 SUPERFAMILY SSF53850 16 131 5.43E-16 T 11-10-2018 AVL55_12245 822dbb8c0e2fb3f8c922f57792582048 134 Gene3D G3DSA:3.40.190.10 17 133 2.0E-10 T 11-10-2018 AVL55_13290 e754c9f73b7054f83103eac1f43fe493 246 Pfam PF07103 Protein of unknown function (DUF1365) 5 241 8.7E-65 T 11-10-2018 IPR010775 Protein of unknown function DUF1365 AVL55_11620 0e7873932b88093b8e8478701e1b7875 132 Pfam PF09335 SNARE associated Golgi protein 19 130 4.5E-13 T 11-10-2018 IPR032816 SNARE associated Golgi protein AVL55_11620 0e7873932b88093b8e8478701e1b7875 132 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 1 106 5.0E-5 T 11-10-2018 IPR020143 Uncharacterised protein family, RP436 AVL55_04485 3f19f5523d2754111c1f2c10ed6c628a 262 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 2.8E-79 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04485 3f19f5523d2754111c1f2c10ed6c628a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.5E-60 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04485 3f19f5523d2754111c1f2c10ed6c628a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.5E-60 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04485 3f19f5523d2754111c1f2c10ed6c628a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.5E-60 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04485 3f19f5523d2754111c1f2c10ed6c628a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.5E-60 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04485 3f19f5523d2754111c1f2c10ed6c628a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.5E-60 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04485 3f19f5523d2754111c1f2c10ed6c628a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.5E-60 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04485 3f19f5523d2754111c1f2c10ed6c628a 262 Pfam PF01578 Cytochrome C assembly protein 25 184 1.5E-30 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AVL55_13270 340710749df6c61f48e78ab566f02d6a 191 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 7 183 2.0E-11 T 11-10-2018 IPR003111 Lon, substrate-binding domain AVL55_13270 340710749df6c61f48e78ab566f02d6a 191 Gene3D G3DSA:1.10.4060.10 117 191 4.1E-5 T 11-10-2018 AVL55_13270 340710749df6c61f48e78ab566f02d6a 191 SUPERFAMILY SSF88697 5 190 6.96E-45 T 11-10-2018 IPR015947 PUA-like superfamily AVL55_13270 340710749df6c61f48e78ab566f02d6a 191 Gene3D G3DSA:2.30.130.40 3 113 1.3E-27 T 11-10-2018 AVL55_03025 aaf9de0de4c9730df4a78cd1466313bb 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 162 1.3E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_03025 aaf9de0de4c9730df4a78cd1466313bb 650 Gene3D G3DSA:2.40.170.20 173 650 6.8E-85 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_03025 aaf9de0de4c9730df4a78cd1466313bb 650 SUPERFAMILY SSF56935 40 648 3.67E-105 T 11-10-2018 AVL55_03025 aaf9de0de4c9730df4a78cd1466313bb 650 Gene3D G3DSA:2.170.130.10 36 167 4.3E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_03025 aaf9de0de4c9730df4a78cd1466313bb 650 Pfam PF00593 TonB dependent receptor 198 648 7.9E-45 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_15425 dcab0bb3d5eda00b74ac68b4f3605985 178 Pfam PF02325 YGGT family 106 171 3.0E-20 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AVL55_15425 dcab0bb3d5eda00b74ac68b4f3605985 178 Pfam PF02325 YGGT family 10 76 1.9E-17 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AVL55_14170 81b018d5a44aef0efc7e6626da1623e6 301 Pfam PF03994 Domain of Unknown Function (DUF350) 93 145 1.2E-5 T 11-10-2018 IPR007140 Protein of unknown function DUF350 AVL55_01680 c9767a47fc87530cacfbc6780b45f6f2 172 Pfam PF10688 Bacterial inner membrane protein 6 165 2.3E-22 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AVL55_07255 cc4dec86b61bdb364f3a5398c9b31248 99 SUPERFAMILY SSF54909 1 97 1.43E-31 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AVL55_07255 cc4dec86b61bdb364f3a5398c9b31248 99 Pfam PF03795 YCII-related domain 1 94 2.4E-28 T 11-10-2018 IPR005545 YCII-related AVL55_07255 cc4dec86b61bdb364f3a5398c9b31248 99 Gene3D G3DSA:3.30.70.1060 1 98 1.6E-36 T 11-10-2018 AVL55_15190 690ad309d9777545914f2e2dbdfe3d39 127 Gene3D G3DSA:3.90.79.10 1 127 6.0E-36 T 11-10-2018 AVL55_15190 690ad309d9777545914f2e2dbdfe3d39 127 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AVL55_15190 690ad309d9777545914f2e2dbdfe3d39 127 Pfam PF00293 NUDIX domain 5 122 3.6E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AVL55_15190 690ad309d9777545914f2e2dbdfe3d39 127 SUPERFAMILY SSF55811 1 126 4.33E-35 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AVL55_15190 690ad309d9777545914f2e2dbdfe3d39 127 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 126 1.2E-36 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AVL55_15190 690ad309d9777545914f2e2dbdfe3d39 127 PRINTS PR00502 NUDIX hydrolase family signature 32 46 8.7E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AVL55_15190 690ad309d9777545914f2e2dbdfe3d39 127 PRINTS PR00502 NUDIX hydrolase family signature 46 61 8.7E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AVL55_07360 83f0d7e18401091d9e414afc554b1ac5 780 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 93 778 2.7E-265 T 11-10-2018 IPR010706 Fatty acid cis-trans isomerase AVL55_17050 2dfd827c4aa4f5883ee8e74b25969f65 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 2.2E-55 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AVL55_17050 2dfd827c4aa4f5883ee8e74b25969f65 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 28.61 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AVL55_17050 2dfd827c4aa4f5883ee8e74b25969f65 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 201 4.0E-98 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AVL55_17050 2dfd827c4aa4f5883ee8e74b25969f65 202 PIRSF PIRSF006102 1 202 2.0E-60 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AVL55_12415 df6cc635b160047e032e7b122bd5a11b 478 Pfam PF00939 Sodium:sulfate symporter transmembrane region 47 470 2.8E-60 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AVL55_12415 df6cc635b160047e032e7b122bd5a11b 478 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 50 475 8.8E-74 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AVL55_02425 3d3161c1820d5492bab6e3e6e7bf0670 144 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 48 105 1.5E-9 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AVL55_02425 3d3161c1820d5492bab6e3e6e7bf0670 144 Gene3D G3DSA:3.30.1150.10 25 123 2.0E-11 T 11-10-2018 AVL55_02425 3d3161c1820d5492bab6e3e6e7bf0670 144 SUPERFAMILY SSF74653 44 103 1.2E-10 T 11-10-2018 AVL55_11805 91df57fc55e95520acb8908163bbecbf 279 SUPERFAMILY SSF103481 27 116 2.75E-5 T 11-10-2018 AVL55_11805 91df57fc55e95520acb8908163bbecbf 279 Pfam PF00892 EamA-like transporter family 131 261 5.0E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_11805 91df57fc55e95520acb8908163bbecbf 279 SUPERFAMILY SSF103481 167 261 3.14E-11 T 11-10-2018 AVL55_05975 1ea643225644ed9b2dbd2ab6c3cf7233 342 Pfam PF06834 TraU protein 43 339 5.8E-101 T 11-10-2018 IPR009649 TraU AVL55_05555 0c9f158beab4a28989304712eeebbe0f 399 Pfam PF07690 Major Facilitator Superfamily 9 319 3.3E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_05555 0c9f158beab4a28989304712eeebbe0f 399 SUPERFAMILY SSF103473 3 379 3.66E-65 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_05555 0c9f158beab4a28989304712eeebbe0f 399 PRINTS PR01035 Tetracycline resistance protein signature 10 26 1.9E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AVL55_05555 0c9f158beab4a28989304712eeebbe0f 399 PRINTS PR01035 Tetracycline resistance protein signature 40 59 1.9E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AVL55_05555 0c9f158beab4a28989304712eeebbe0f 399 PRINTS PR01035 Tetracycline resistance protein signature 98 119 1.9E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AVL55_05555 0c9f158beab4a28989304712eeebbe0f 399 PRINTS PR01035 Tetracycline resistance protein signature 158 178 1.9E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AVL55_05555 0c9f158beab4a28989304712eeebbe0f 399 Gene3D G3DSA:1.20.1250.20 3 377 1.9E-54 T 11-10-2018 AVL55_08505 59d876e42569662a4f9eced369f5fb5b 85 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 1.6E-22 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AVL55_17270 1e176054072dab3b70f91b320b45d5b5 572 Gene3D G3DSA:3.90.550.10 271 523 3.4E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17270 1e176054072dab3b70f91b320b45d5b5 572 Pfam PF00535 Glycosyl transferase family 2 294 474 4.8E-16 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_17270 1e176054072dab3b70f91b320b45d5b5 572 SUPERFAMILY SSF53448 286 546 2.63E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_05545 b57517fa1b6e14567d3b4147a528b0a1 309 Pfam PF00892 EamA-like transporter family 160 291 3.8E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_05545 b57517fa1b6e14567d3b4147a528b0a1 309 Pfam PF00892 EamA-like transporter family 13 148 4.1E-23 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_05545 b57517fa1b6e14567d3b4147a528b0a1 309 SUPERFAMILY SSF103481 191 296 1.83E-10 T 11-10-2018 AVL55_05545 b57517fa1b6e14567d3b4147a528b0a1 309 SUPERFAMILY SSF103481 47 151 9.94E-14 T 11-10-2018 AVL55_11390 652ef7328bf76a4f39bd3e7810a2fc31 321 SUPERFAMILY SSF53686 4 308 3.4E-97 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AVL55_11390 652ef7328bf76a4f39bd3e7810a2fc31 321 Gene3D G3DSA:3.40.50.1100 42 144 4.9E-124 T 11-10-2018 AVL55_11390 652ef7328bf76a4f39bd3e7810a2fc31 321 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 296 6.4E-72 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AVL55_11390 652ef7328bf76a4f39bd3e7810a2fc31 321 Gene3D G3DSA:3.40.50.1100 11 305 4.9E-124 T 11-10-2018 AVL55_11390 652ef7328bf76a4f39bd3e7810a2fc31 321 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 310 1.7E-132 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AVL55_11390 652ef7328bf76a4f39bd3e7810a2fc31 321 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 310 1.7E-139 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AVL55_11390 652ef7328bf76a4f39bd3e7810a2fc31 321 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AVL55_12480 144cbb7f8bc8e2a1e467ea486d8da662 640 SUPERFAMILY SSF53649 151 630 1.03E-149 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AVL55_12480 144cbb7f8bc8e2a1e467ea486d8da662 640 Gene3D G3DSA:3.40.720.10 132 639 1.2E-177 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AVL55_12480 144cbb7f8bc8e2a1e467ea486d8da662 640 PRINTS PR00113 Alkaline phosphatase signature 429 458 2.1E-43 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12480 144cbb7f8bc8e2a1e467ea486d8da662 640 PRINTS PR00113 Alkaline phosphatase signature 217 232 2.1E-43 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12480 144cbb7f8bc8e2a1e467ea486d8da662 640 PRINTS PR00113 Alkaline phosphatase signature 161 181 2.1E-43 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12480 144cbb7f8bc8e2a1e467ea486d8da662 640 PRINTS PR00113 Alkaline phosphatase signature 264 284 2.1E-43 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12480 144cbb7f8bc8e2a1e467ea486d8da662 640 SMART SM00098 162 632 5.1E-140 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_12480 144cbb7f8bc8e2a1e467ea486d8da662 640 Pfam PF00245 Alkaline phosphatase 161 628 4.2E-122 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AVL55_14605 8f52c95d04101d79f72f30244d0751e7 196 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 14 189 4.3E-41 T 11-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE AVL55_13470 4f321c666880234bb02c29c5b1b705d6 83 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 5.0E-26 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase AVL55_13470 4f321c666880234bb02c29c5b1b705d6 83 Gene3D G3DSA:1.10.150.250 1 83 3.3E-33 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AVL55_13470 4f321c666880234bb02c29c5b1b705d6 83 SUPERFAMILY SSF109910 2 79 4.05E-26 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AVL55_04160 4e5b320939b6e75aa3adbe5448ea1dac 185 PIRSF PIRSF003174 29 185 7.8E-49 T 11-10-2018 IPR010292 Uncharacterised protein family CreA AVL55_04160 4e5b320939b6e75aa3adbe5448ea1dac 185 Pfam PF05981 CreA protein 55 177 5.3E-45 T 11-10-2018 IPR010292 Uncharacterised protein family CreA AVL55_16955 ab515ee50c282a24f15d030e586e0fa4 213 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 7.4E-30 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_16955 ab515ee50c282a24f15d030e586e0fa4 213 SMART SM00849 12 192 1.1E-36 T 11-10-2018 IPR001279 Metallo-beta-lactamase AVL55_16955 ab515ee50c282a24f15d030e586e0fa4 213 SUPERFAMILY SSF56281 6 203 4.2E-55 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_16955 ab515ee50c282a24f15d030e586e0fa4 213 Gene3D G3DSA:3.60.15.10 1 210 2.7E-78 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AVL55_04480 6f843b159fde20f2df0e85fd34b02bb0 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 3.1E-58 T 11-10-2018 AVL55_04480 6f843b159fde20f2df0e85fd34b02bb0 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 3.1E-58 T 11-10-2018 AVL55_04480 6f843b159fde20f2df0e85fd34b02bb0 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 3.1E-58 T 11-10-2018 AVL55_04480 6f843b159fde20f2df0e85fd34b02bb0 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 3.1E-58 T 11-10-2018 AVL55_04480 6f843b159fde20f2df0e85fd34b02bb0 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 133 156 3.1E-58 T 11-10-2018 AVL55_04480 6f843b159fde20f2df0e85fd34b02bb0 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 3.1E-58 T 11-10-2018 AVL55_04480 6f843b159fde20f2df0e85fd34b02bb0 221 PIRSF PIRSF002764 1 221 2.0E-74 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AVL55_04480 6f843b159fde20f2df0e85fd34b02bb0 221 Pfam PF03379 CcmB protein 7 218 6.6E-76 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AVL55_04480 6f843b159fde20f2df0e85fd34b02bb0 221 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 7 217 9.0E-77 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AVL55_19100 88f7e7b6bce6c67c07f95f332162cc16 298 Pfam PF01040 UbiA prenyltransferase family 22 266 3.3E-53 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AVL55_19100 88f7e7b6bce6c67c07f95f332162cc16 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 59 81 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AVL55_19100 88f7e7b6bce6c67c07f95f332162cc16 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 285 4.1E-82 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AVL55_19100 88f7e7b6bce6c67c07f95f332162cc16 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 287 17.019 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AVL55_19100 88f7e7b6bce6c67c07f95f332162cc16 298 Gene3D G3DSA:1.10.357.140 16 185 3.8E-16 T 11-10-2018 AVL55_04165 403d751f3a470f25db98a9aff3d3e322 254 Pfam PF06629 MltA-interacting protein MipA 38 252 4.1E-37 T 11-10-2018 IPR010583 MltA-interacting MipA AVL55_04165 403d751f3a470f25db98a9aff3d3e322 254 SUPERFAMILY SSF103515 34 227 3.66E-5 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily AVL55_02700 bd4abafd1e2b4a9dc2d826a822557ab0 359 Gene3D G3DSA:1.10.10.60 261 359 5.7E-8 T 11-10-2018 AVL55_11435 5f10fcd9181ab8925bb3aad48fc1f269 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 1.1E-50 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AVL55_11435 5f10fcd9181ab8925bb3aad48fc1f269 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.315 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AVL55_00390 02cac838c339e0a61f9a271b1b516155 589 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 29 519 1.1E-162 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AVL55_00390 02cac838c339e0a61f9a271b1b516155 589 ProSitePatterns PS01303 BCCT family of transporters signature. 337 346 - T 11-10-2018 IPR018093 BCCT transporter, conserved site AVL55_00390 02cac838c339e0a61f9a271b1b516155 589 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 68 519 1.9E-145 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AVL55_19260 d9c6d23cc32855085fc51562c255c95a 271 PIRSF PIRSF031679 1 270 6.4E-95 T 11-10-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted AVL55_19260 d9c6d23cc32855085fc51562c255c95a 271 SUPERFAMILY SSF53335 38 229 6.01E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_19260 d9c6d23cc32855085fc51562c255c95a 271 Gene3D G3DSA:3.40.50.150 26 229 7.4E-17 T 11-10-2018 AVL55_17870 17d1c918b0bda7d9d3d0de30016078a2 110 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 11 99 9.0E-42 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AVL55_17870 17d1c918b0bda7d9d3d0de30016078a2 110 Gene3D G3DSA:1.10.140.10 2 104 3.4E-54 T 11-10-2018 IPR023453 Methionine repressor MetJ domain superfamily AVL55_17870 17d1c918b0bda7d9d3d0de30016078a2 110 SUPERFAMILY SSF47598 2 101 6.45E-55 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AVL55_17870 17d1c918b0bda7d9d3d0de30016078a2 110 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.7E-58 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AVL55_19905 c35cb509a41095bc92b4ea9b295d8831 449 Pfam PF13657 HipA N-terminal domain 21 120 6.0E-15 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AVL55_19905 c35cb509a41095bc92b4ea9b295d8831 449 Pfam PF07804 HipA-like C-terminal domain 178 414 2.9E-36 T 11-10-2018 IPR012893 HipA-like, C-terminal AVL55_10385 7c30f8090930259e795fce22911e6d66 309 Pfam PF04381 Putative exonuclease, RdgC 5 306 2.3E-37 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AVL55_06085 1f1328aadc201b7cc3f7768a8d01bba5 379 PIRSF PIRSF004810 1 379 7.6E-114 T 11-10-2018 IPR014047 Chromate transporter, long chain AVL55_06085 1f1328aadc201b7cc3f7768a8d01bba5 379 Pfam PF02417 Chromate transporter 212 373 2.7E-34 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AVL55_06085 1f1328aadc201b7cc3f7768a8d01bba5 379 Pfam PF02417 Chromate transporter 3 168 5.2E-34 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AVL55_06085 1f1328aadc201b7cc3f7768a8d01bba5 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 1.4E-91 T 11-10-2018 IPR014047 Chromate transporter, long chain AVL55_14350 317351ed4d61de3883ffbac551aa8064 110 SUPERFAMILY SSF55331 1 110 2.18E-30 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AVL55_14350 317351ed4d61de3883ffbac551aa8064 110 Gene3D G3DSA:3.30.429.10 1 110 2.0E-36 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AVL55_14350 317351ed4d61de3883ffbac551aa8064 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 7.5E-34 T 11-10-2018 IPR015017 Protein of unknown function DUF1904 AVL55_11210 8019c707ad65302648a1e882252a7556 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 3.0E-28 T 11-10-2018 IPR018680 Protein of unknown function DUF2164 AVL55_09395 0f7c10952f19b9f9e241990b75f622cd 175 SUPERFAMILY SSF52540 1 99 3.25E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_09395 0f7c10952f19b9f9e241990b75f622cd 175 Gene3D G3DSA:3.40.50.300 1 173 3.9E-12 T 11-10-2018 AVL55_09395 0f7c10952f19b9f9e241990b75f622cd 175 Pfam PF13175 AAA ATPase domain 1 146 1.5E-17 T 11-10-2018 AVL55_17665 357edafa2ae1517a47780239250d6eb0 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 12 325 8.7E-78 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AVL55_19200 c386f3ddca33ddd7a89823540de1008b 87 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 77 6.4E-34 T 11-10-2018 IPR019882 Conserved hypothetical protein CHP03643 AVL55_19200 c386f3ddca33ddd7a89823540de1008b 87 Pfam PF10985 Protein of unknown function (DUF2805) 9 79 5.5E-34 T 11-10-2018 IPR019882 Conserved hypothetical protein CHP03643 AVL55_16215 de4fbb7250e41cfa87f8913ed71d435f 369 SUPERFAMILY SSF52540 2 342 1.82E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_16215 de4fbb7250e41cfa87f8913ed71d435f 369 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 43 325 3.6E-19 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AVL55_16215 de4fbb7250e41cfa87f8913ed71d435f 369 Gene3D G3DSA:3.40.50.300 1 352 5.1E-17 T 11-10-2018 AVL55_08350 6677dbfd2f723e8020b99b9ce5f24e94 429 Pfam PF13692 Glycosyl transferases group 1 196 320 2.4E-16 T 11-10-2018 AVL55_08350 6677dbfd2f723e8020b99b9ce5f24e94 429 Gene3D G3DSA:3.40.50.2000 190 362 8.9E-9 T 11-10-2018 AVL55_08350 6677dbfd2f723e8020b99b9ce5f24e94 429 SUPERFAMILY SSF53756 7 371 5.4E-16 T 11-10-2018 AVL55_18780 3bcffb6b872c491b1e01596468c3cb1d 293 Gene3D G3DSA:2.50.20.10 42 285 8.3E-54 T 11-10-2018 AVL55_18780 3bcffb6b872c491b1e01596468c3cb1d 293 Pfam PF17131 Outer membrane lipoprotein-sorting protein 105 285 7.2E-48 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AVL55_18780 3bcffb6b872c491b1e01596468c3cb1d 293 SUPERFAMILY SSF89392 126 280 7.06E-6 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AVL55_18765 f1728e724d6124c004cbe7ce30c4e955 265 Gene3D G3DSA:3.40.50.1000 35 265 2.9E-47 T 11-10-2018 IPR023214 HAD superfamily AVL55_18765 f1728e724d6124c004cbe7ce30c4e955 265 SUPERFAMILY SSF56784 78 265 2.81E-21 T 11-10-2018 IPR036412 HAD-like superfamily AVL55_18765 f1728e724d6124c004cbe7ce30c4e955 265 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 46 265 6.4E-33 T 11-10-2018 IPR005519 Acid phosphatase, class B-like AVL55_17445 b00c6cb02b525689dcac16e62ea65d64 248 Gene3D G3DSA:3.40.50.300 3 230 3.1E-8 T 11-10-2018 AVL55_17445 b00c6cb02b525689dcac16e62ea65d64 248 SUPERFAMILY SSF52540 9 223 9.49E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_06320 b7673f7fd0f4b07336e39d401ad63482 428 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 39.666 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 AVL55_06320 b7673f7fd0f4b07336e39d401ad63482 428 Pfam PF04285 Protein of unknown function (DUF444) 3 419 3.5E-183 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 AVL55_01175 14e1b07e7158a4314ec858429167ff99 87 SUPERFAMILY SSF56672 1 78 8.54E-17 T 11-10-2018 AVL55_01175 14e1b07e7158a4314ec858429167ff99 87 Gene3D G3DSA:2.30.40.20 10 73 1.9E-10 T 11-10-2018 AVL55_01175 14e1b07e7158a4314ec858429167ff99 87 Pfam PF00817 impB/mucB/samB family 5 76 5.8E-11 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AVL55_02365 be22ce2e616e8326804434f543a80646 84 Gene3D G3DSA:2.30.30.400 3 82 6.7E-18 T 11-10-2018 IPR038626 Rof-like superfamily AVL55_02365 be22ce2e616e8326804434f543a80646 84 SUPERFAMILY SSF101744 3 84 3.71E-18 T 11-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AVL55_02365 be22ce2e616e8326804434f543a80646 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 3 84 3.7E-24 T 11-10-2018 IPR009778 Modulator of Rho-dependent transcription termination AVL55_06280 1cf89e9e12d906755786f73b8ad8dba4 212 Gene3D G3DSA:1.10.530.10 42 198 4.2E-13 T 11-10-2018 AVL55_06280 1cf89e9e12d906755786f73b8ad8dba4 212 SUPERFAMILY SSF53955 26 175 6.29E-26 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AVL55_00930 e0d815c6714e84f4e3dced6cc3de6562 287 Gene3D G3DSA:3.40.50.1820 55 287 2.9E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_00930 e0d815c6714e84f4e3dced6cc3de6562 287 SUPERFAMILY SSF53474 17 284 5.97E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_14610 2104d48b46fd999758ca5e6e045b6090 1169 SUPERFAMILY SSF103088 929 998 1.83E-5 T 11-10-2018 IPR036737 OmpA-like domain superfamily AVL55_14610 2104d48b46fd999758ca5e6e045b6090 1169 Pfam PF05359 Domain of Unknown Function (DUF748) 721 865 3.3E-33 T 11-10-2018 IPR008023 Protein of unknown function DUF748 AVL55_14610 2104d48b46fd999758ca5e6e045b6090 1169 Pfam PF05359 Domain of Unknown Function (DUF748) 179 339 1.5E-9 T 11-10-2018 IPR008023 Protein of unknown function DUF748 AVL55_14610 2104d48b46fd999758ca5e6e045b6090 1169 Pfam PF05359 Domain of Unknown Function (DUF748) 471 636 3.0E-18 T 11-10-2018 IPR008023 Protein of unknown function DUF748 AVL55_16300 7d4fdce27093841de2bdf08f9cc043c6 90 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 3 90 7.1E-38 T 11-10-2018 IPR018678 Protein of unknown function DUF2160, transmembrane AVL55_05845 d800e4ed1b5b867d745842e042e532f9 298 Pfam PF06586 TraK protein 63 275 5.5E-15 T 11-10-2018 IPR010563 Pilus assembly TraK AVL55_15920 39b5ca635fce971461fa637b78f54798 86 Gene3D G3DSA:3.30.1070.10 1 83 1.1E-30 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AVL55_15920 39b5ca635fce971461fa637b78f54798 86 SUPERFAMILY SSF55229 34 84 3.14E-16 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AVL55_15920 39b5ca635fce971461fa637b78f54798 86 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 4.5E-26 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AVL55_15920 39b5ca635fce971461fa637b78f54798 86 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 7.0E-29 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AVL55_15920 39b5ca635fce971461fa637b78f54798 86 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.895 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AVL55_07030 364212b16f1e7ff45c125cfcdd60b389 173 Pfam PF11157 Protein of unknown function (DUF2937) 2 160 2.6E-42 T 11-10-2018 IPR022584 Protein of unknown function DUF2937 AVL55_18335 5d5b4ae9616c582d30e1f0ef7ee5f64b 316 SUPERFAMILY SSF51430 8 314 1.83E-67 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_18335 5d5b4ae9616c582d30e1f0ef7ee5f64b 316 Gene3D G3DSA:3.20.20.100 1 316 2.8E-87 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AVL55_18335 5d5b4ae9616c582d30e1f0ef7ee5f64b 316 Pfam PF00248 Aldo/keto reductase family 11 306 1.2E-52 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AVL55_16455 8f3d96379493d4831a39d403361e24e3 678 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 495 2.8E-185 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AVL55_16455 8f3d96379493d4831a39d403361e24e3 678 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 495 2.6E-150 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AVL55_00300 429f8ff722d7399111e6e2c8b3217aee 157 Gene3D G3DSA:3.40.190.10 39 156 6.2E-13 T 11-10-2018 AVL55_00300 429f8ff722d7399111e6e2c8b3217aee 157 SUPERFAMILY SSF53850 39 145 1.79E-15 T 11-10-2018 AVL55_01115 dc39f411965444f03815a2bc4883058c 443 Pfam PF01523 Putative modulator of DNA gyrase 28 320 4.2E-54 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AVL55_01115 dc39f411965444f03815a2bc4883058c 443 Gene3D G3DSA:3.30.2290.10 2 229 3.5E-83 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AVL55_01115 dc39f411965444f03815a2bc4883058c 443 SUPERFAMILY SSF111283 8 442 2.62E-121 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AVL55_17325 f0c304f00368b7f5bfc7ce723c198cc2 579 Pfam PF00535 Glycosyl transferase family 2 315 456 2.4E-9 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AVL55_17325 f0c304f00368b7f5bfc7ce723c198cc2 579 SUPERFAMILY SSF53448 310 556 6.49E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17325 f0c304f00368b7f5bfc7ce723c198cc2 579 Gene3D G3DSA:3.90.550.10 299 545 2.1E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_15310 cc1f8d70124ace77652ba6ad8f7ce582 466 SUPERFAMILY SSF56954 23 454 2.75E-45 T 11-10-2018 AVL55_15310 cc1f8d70124ace77652ba6ad8f7ce582 466 Pfam PF02321 Outer membrane efflux protein 47 231 3.9E-14 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_15310 cc1f8d70124ace77652ba6ad8f7ce582 466 Pfam PF02321 Outer membrane efflux protein 278 454 2.0E-9 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AVL55_15310 cc1f8d70124ace77652ba6ad8f7ce582 466 Gene3D G3DSA:1.20.1600.10 41 455 1.2E-42 T 11-10-2018 AVL55_10745 083ea89b08be7165232861a1eb167082 53 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 3 45 5.7E-14 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component AVL55_05270 4fca0e6f6ec090a51b7f89fa11029ff3 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 1.1E-34 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AVL55_05270 4fca0e6f6ec090a51b7f89fa11029ff3 94 SUPERFAMILY SSF51182 3 93 2.23E-34 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_05270 4fca0e6f6ec090a51b7f89fa11029ff3 94 Gene3D G3DSA:2.60.120.10 1 94 2.0E-34 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_05270 4fca0e6f6ec090a51b7f89fa11029ff3 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 24.885 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AVL55_10920 bfefc72d0c321aad342f89b62e953a9b 129 SUPERFAMILY SSF75169 1 129 4.21E-27 T 11-10-2018 IPR027396 DsrEFH-like AVL55_10920 bfefc72d0c321aad342f89b62e953a9b 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 129 1.5E-39 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AVL55_10920 bfefc72d0c321aad342f89b62e953a9b 129 Pfam PF02635 DsrE/DsrF-like family 4 129 5.3E-16 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AVL55_10920 bfefc72d0c321aad342f89b62e953a9b 129 Gene3D G3DSA:3.40.1260.10 1 129 2.5E-41 T 11-10-2018 IPR027396 DsrEFH-like AVL55_16830 005a6aabaa90c5014368ff1a7178caa6 304 Pfam PF01553 Acyltransferase 75 227 5.2E-17 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_16830 005a6aabaa90c5014368ff1a7178caa6 304 SUPERFAMILY SSF69593 35 289 7.06E-36 T 11-10-2018 AVL55_16830 005a6aabaa90c5014368ff1a7178caa6 304 SMART SM00563 88 230 9.2E-22 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AVL55_15600 51f7b456e42900b48dca789976366375 186 Pfam PF12915 Protein of unknown function (DUF3833) 20 183 1.3E-60 T 11-10-2018 IPR024409 Protein of unknown function DUF3833 AVL55_11655 048323eb96e63577baef938e1f41aa77 876 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 184 1.6E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_11655 048323eb96e63577baef938e1f41aa77 876 SUPERFAMILY SSF56935 60 876 1.54E-100 T 11-10-2018 AVL55_11655 048323eb96e63577baef938e1f41aa77 876 Pfam PF00593 TonB dependent receptor 303 873 1.7E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AVL55_11655 048323eb96e63577baef938e1f41aa77 876 Gene3D G3DSA:2.40.170.20 570 876 3.7E-51 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AVL55_17390 bd422813d81acadc01543e9ee5406c5d 504 Gene3D G3DSA:2.160.20.20 109 430 5.0E-8 T 11-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily AVL55_19845 aaab172e774d13824c8eeae463e26188 110 SUPERFAMILY SSF46785 26 101 2.33E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_19845 aaab172e774d13824c8eeae463e26188 110 Pfam PF09339 IclR helix-turn-helix domain 44 85 8.6E-6 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AVL55_19845 aaab172e774d13824c8eeae463e26188 110 Gene3D G3DSA:1.10.10.10 28 99 1.1E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AVL55_03840 d4f322e0d0cf5cc0adac71ec932f04f0 143 Pfam PF01152 Bacterial-like globin 28 137 1.1E-11 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 AVL55_03840 d4f322e0d0cf5cc0adac71ec932f04f0 143 SUPERFAMILY SSF46458 27 138 2.04E-23 T 11-10-2018 IPR009050 Globin-like superfamily AVL55_03840 d4f322e0d0cf5cc0adac71ec932f04f0 143 Gene3D G3DSA:1.10.490.10 16 142 7.7E-29 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AVL55_16930 85292a0362717cba7bf3c2903d00e44d 124 Pfam PF08000 Bacterial PH domain 3 120 7.5E-44 T 11-10-2018 IPR012544 Bacterial Pleckstrin homology domain AVL55_16930 85292a0362717cba7bf3c2903d00e44d 124 Gene3D G3DSA:2.30.29.50 1 123 4.0E-46 T 11-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily AVL55_16930 85292a0362717cba7bf3c2903d00e44d 124 SUPERFAMILY SSF50729 7 118 1.84E-38 T 11-10-2018 AVL55_03445 3ae5a038b1437a678f14a8b2b25dd4ed 600 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 61 221 5.6E-15 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AVL55_09570 db9c2c9b34f40608ac6b50fbdd46b9a7 140 Pfam PF11911 Protein of unknown function (DUF3429) 2 136 9.9E-26 T 11-10-2018 IPR021836 Protein of unknown function DUF3429 AVL55_11380 7e35aa1b647cc7235914839cb5873544 393 Pfam PF05762 VWA domain containing CoxE-like protein 186 273 1.1E-6 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like AVL55_04985 59370006a2db410f14b276b1e51ca440 476 Pfam PF00501 AMP-binding enzyme 136 380 2.8E-44 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AVL55_04985 59370006a2db410f14b276b1e51ca440 476 SUPERFAMILY SSF56801 21 471 4.45E-71 T 11-10-2018 AVL55_04985 59370006a2db410f14b276b1e51ca440 476 Gene3D G3DSA:3.40.50.12780 18 373 4.3E-64 T 11-10-2018 AVL55_04985 59370006a2db410f14b276b1e51ca440 476 Gene3D G3DSA:3.30.300.30 375 474 6.9E-6 T 11-10-2018 AVL55_06315 fbe8fd70b0c0cb1bd7a95c2877f2c3dd 515 Pfam PF04293 SpoVR like protein 26 456 8.7E-174 T 11-10-2018 IPR007390 Sporulation stage V, protein R AVL55_17355 e584b38966b2dd87b480e766e2730076 364 SUPERFAMILY SSF53756 2 184 1.36E-6 T 11-10-2018 AVL55_08370 b2c514fe479ed2d206fc9cef61c04d85 270 Gene3D G3DSA:3.40.50.1820 2 266 5.9E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_08370 b2c514fe479ed2d206fc9cef61c04d85 270 SUPERFAMILY SSF53474 10 260 9.7E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_08370 b2c514fe479ed2d206fc9cef61c04d85 270 Pfam PF12697 Alpha/beta hydrolase family 10 256 1.3E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AVL55_06825 bf4a8079c095d62b5867731d670807e1 229 TIGRFAM TIGR02796 tolQ: protein TolQ 7 218 1.1E-91 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AVL55_06825 bf4a8079c095d62b5867731d670807e1 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 205 2.1E-41 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AVL55_06825 bf4a8079c095d62b5867731d670807e1 229 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 223 43.7 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AVL55_06205 3f4c85e7a03f2b9a1ea1e4bb704ca1f0 292 Pfam PF04224 Protein of unknown function, DUF417 142 269 4.3E-18 T 11-10-2018 IPR007339 Inner membrane protein RclC-like AVL55_07775 7621cf2c3b2fc388d2884ec22e3564ac 69 Pfam PF11446 Protein of unknown function (DUF2897) 3 50 9.7E-16 T 11-10-2018 IPR021550 Protein of unknown function DUF2897 AVL55_14100 82c52cc70bfaf686fa010a5c973cc858 224 SUPERFAMILY SSF52266 5 198 6.6E-10 T 11-10-2018 AVL55_14100 82c52cc70bfaf686fa010a5c973cc858 224 Gene3D G3DSA:3.40.50.1110 2 209 1.1E-9 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AVL55_06360 9a62b33ee1f8c058ba693aa885ae0cad 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 3 51 6.6E-15 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AVL55_06360 9a62b33ee1f8c058ba693aa885ae0cad 64 Gene3D G3DSA:1.10.10.1100 1 57 6.1E-21 T 11-10-2018 AVL55_05130 451a2457b3ef71b7887cc63c9c11d531 260 PRINTS PR01003 Flagellar assembly protein FliH signature 212 228 6.7E-9 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AVL55_05130 451a2457b3ef71b7887cc63c9c11d531 260 PRINTS PR01003 Flagellar assembly protein FliH signature 103 121 6.7E-9 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AVL55_05130 451a2457b3ef71b7887cc63c9c11d531 260 PRINTS PR01003 Flagellar assembly protein FliH signature 80 102 6.7E-9 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AVL55_05130 451a2457b3ef71b7887cc63c9c11d531 260 PRINTS PR01003 Flagellar assembly protein FliH signature 142 159 6.7E-9 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AVL55_05130 451a2457b3ef71b7887cc63c9c11d531 260 Pfam PF02108 Flagellar assembly protein FliH 121 246 1.4E-33 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AVL55_05130 451a2457b3ef71b7887cc63c9c11d531 260 SUPERFAMILY SSF160527 162 252 9.42E-5 T 11-10-2018 AVL55_17100 dfb7a1edcbf95e0eaa083ae98ce6b730 227 SUPERFAMILY SSF52317 1 226 7.7E-72 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_17100 dfb7a1edcbf95e0eaa083ae98ce6b730 227 Pfam PF01965 DJ-1/PfpI family 27 216 8.4E-16 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AVL55_17100 dfb7a1edcbf95e0eaa083ae98ce6b730 227 Gene3D G3DSA:3.40.50.880 1 227 2.1E-77 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_08220 03f4fdcef2b6f16fe430fe4dc9790af8 375 Pfam PF04577 Protein of unknown function (DUF563) 89 294 2.1E-18 T 11-10-2018 IPR007657 Glycosyltransferase 61 GO:0016757 AVL55_06570 acd439e666c544eaa37dc81f1c74aa64 324 Pfam PF01882 Protein of unknown function DUF58 57 141 2.7E-21 T 11-10-2018 IPR002881 Domain of unknown function DUF58 AVL55_12525 1d898a6dba5b899c453e83069aaeef10 522 SUPERFAMILY SSF53474 51 493 8.65E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_12525 1d898a6dba5b899c453e83069aaeef10 522 Pfam PF00450 Serine carboxypeptidase 80 281 1.5E-14 T 11-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 AVL55_12525 1d898a6dba5b899c453e83069aaeef10 522 Gene3D G3DSA:3.40.50.1820 59 303 8.5E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_06960 ca156c9a036d8d0cb6bbf4b80c02a51d 163 SUPERFAMILY SSF55729 5 157 1.15E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AVL55_06960 ca156c9a036d8d0cb6bbf4b80c02a51d 163 Pfam PF00583 Acetyltransferase (GNAT) family 38 138 2.5E-21 T 11-10-2018 IPR000182 GNAT domain AVL55_06960 ca156c9a036d8d0cb6bbf4b80c02a51d 163 Gene3D G3DSA:3.40.630.30 1 160 1.8E-54 T 11-10-2018 AVL55_12580 263f67509e09eebd9c93cfa1ee210bfe 1529 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 53 125 3.5E-27 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal AVL55_12580 263f67509e09eebd9c93cfa1ee210bfe 1529 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1485 1528 9.9E-17 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal AVL55_12580 263f67509e09eebd9c93cfa1ee210bfe 1529 Gene3D G3DSA:1.20.58.2200 1467 1529 7.2E-18 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily AVL55_16910 24bdfddc937902c358c97fa4928a9f92 162 Pfam PF10688 Bacterial inner membrane protein 4 159 9.2E-26 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AVL55_04610 c99ff382382abca04e9d724d7d229278 124 Pfam PF11399 Protein of unknown function (DUF3192) 22 119 1.3E-41 T 11-10-2018 IPR021534 Protein of unknown function DUF3192 AVL55_05850 2739d6820f8455fcf3fd680853e4c403 429 Pfam PF03743 Bacterial conjugation TrbI-like protein 213 416 2.9E-39 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AVL55_03935 00afd377d2b59cbd6c2d566215bd649d 299 Gene3D G3DSA:3.20.20.70 2 299 3.0E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_03935 00afd377d2b59cbd6c2d566215bd649d 299 Pfam PF00274 Fructose-bisphosphate aldolase class-I 20 204 4.9E-9 T 11-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AVL55_03935 00afd377d2b59cbd6c2d566215bd649d 299 SUPERFAMILY SSF51569 7 297 9.94E-94 T 11-10-2018 AVL55_04240 027f771fac611794f53c7f1004ad8f07 395 Pfam PF07690 Major Facilitator Superfamily 19 359 3.8E-24 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AVL55_04240 027f771fac611794f53c7f1004ad8f07 395 Gene3D G3DSA:1.20.1720.10 13 391 5.4E-54 T 11-10-2018 AVL55_04240 027f771fac611794f53c7f1004ad8f07 395 SUPERFAMILY SSF103473 5 394 9.81E-37 T 11-10-2018 IPR036259 MFS transporter superfamily AVL55_01325 0c8f57748da0a3dc677082c96b28892b 580 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 236 5.7E-23 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AVL55_12890 380d9b1ff88656321dd3d877ca46024a 98 Pfam PF05166 YcgL domain 3 75 3.5E-30 T 11-10-2018 IPR027354 YcgL domain AVL55_12890 380d9b1ff88656321dd3d877ca46024a 98 SUPERFAMILY SSF160191 1 92 1.7E-36 T 11-10-2018 IPR038068 YcgL-like superfamily AVL55_12890 380d9b1ff88656321dd3d877ca46024a 98 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.157 T 11-10-2018 IPR027354 YcgL domain AVL55_12890 380d9b1ff88656321dd3d877ca46024a 98 Gene3D G3DSA:3.10.510.20 1 74 6.5E-29 T 11-10-2018 IPR038068 YcgL-like superfamily AVL55_12890 380d9b1ff88656321dd3d877ca46024a 98 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 2.0E-19 T 11-10-2018 IPR027354 YcgL domain AVL55_16290 570d5038e3c2785c425996ad13bd9c50 381 Gene3D G3DSA:2.40.160.10 41 381 7.7E-25 T 11-10-2018 IPR023614 Porin domain superfamily AVL55_16290 570d5038e3c2785c425996ad13bd9c50 381 SUPERFAMILY SSF56935 36 381 1.53E-28 T 11-10-2018 AVL55_16290 570d5038e3c2785c425996ad13bd9c50 381 Pfam PF13609 Gram-negative porin 19 363 6.2E-25 T 11-10-2018 AVL55_01100 5f389dc0a826d3dc06affecb7595be49 480 PIRSF PIRSF004919 15 480 4.9E-145 T 11-10-2018 IPR025502 TldD AVL55_01100 5f389dc0a826d3dc06affecb7595be49 480 Pfam PF01523 Putative modulator of DNA gyrase 34 331 2.7E-67 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AVL55_01100 5f389dc0a826d3dc06affecb7595be49 480 Gene3D G3DSA:3.30.2290.10 15 220 2.4E-16 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AVL55_01100 5f389dc0a826d3dc06affecb7595be49 480 SUPERFAMILY SSF111283 20 479 5.36E-130 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AVL55_01705 dcd19237f41ce3ba3e4ecc12982fdb41 274 Pfam PF10670 Domain of unknown function (DUF4198) 19 243 1.3E-32 T 11-10-2018 IPR019613 Protein of unknown function DUF4198 AVL55_08025 e032c6ea5b0dfdd4ba9a596b552884fe 121 Pfam PF05899 Protein of unknown function (DUF861) 52 91 2.9E-5 T 11-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AVL55_08025 e032c6ea5b0dfdd4ba9a596b552884fe 121 SUPERFAMILY SSF51182 19 105 2.61E-8 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AVL55_08025 e032c6ea5b0dfdd4ba9a596b552884fe 121 Gene3D G3DSA:2.60.120.10 30 102 1.5E-6 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AVL55_14970 07c223bc359c661f08809530bba04759 503 SUPERFAMILY SSF140931 332 502 1.16E-28 T 11-10-2018 IPR036597 Fido-like domain superfamily AVL55_14970 07c223bc359c661f08809530bba04759 503 Pfam PF02661 Fic/DOC family 389 461 8.5E-11 T 11-10-2018 IPR003812 Fido domain AVL55_14970 07c223bc359c661f08809530bba04759 503 Gene3D G3DSA:1.10.3290.10 270 503 1.3E-42 T 11-10-2018 IPR036597 Fido-like domain superfamily AVL55_17885 61c90a0e3eefe21481ede5b0c58e55ac 212 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 9.8E-91 T 11-10-2018 IPR021342 Protein of unknown function DUF2959 AVL55_00305 df471400ae27c13e4148a101e972ea1f 391 SUPERFAMILY SSF56935 19 391 2.29E-18 T 11-10-2018 AVL55_00450 1eefff08525fade7b55d9bf26277bf5d 565 Gene3D G3DSA:3.40.50.150 2 200 1.9E-24 T 11-10-2018 AVL55_00450 1eefff08525fade7b55d9bf26277bf5d 565 Pfam PF13395 HNH endonuclease 460 496 5.0E-5 T 11-10-2018 IPR003615 HNH nuclease AVL55_00450 1eefff08525fade7b55d9bf26277bf5d 565 Pfam PF13489 Methyltransferase domain 36 149 2.5E-11 T 11-10-2018 AVL55_00450 1eefff08525fade7b55d9bf26277bf5d 565 SUPERFAMILY SSF53335 29 173 7.08E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AVL55_05610 1bd7b043937ef91093ba8130f81d6c2c 409 Pfam PF13657 HipA N-terminal domain 8 112 1.3E-17 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AVL55_05610 1bd7b043937ef91093ba8130f81d6c2c 409 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 112 1.6E-14 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AVL55_05610 1bd7b043937ef91093ba8130f81d6c2c 409 Pfam PF07804 HipA-like C-terminal domain 140 382 1.8E-51 T 11-10-2018 IPR012893 HipA-like, C-terminal AVL55_05610 1bd7b043937ef91093ba8130f81d6c2c 409 Gene3D G3DSA:1.10.1070.20 246 362 2.4E-8 T 11-10-2018 AVL55_06545 1a5dd5d16195c55961ce5b69bae86ab6 617 Pfam PF05960 Bacterial protein of unknown function (DUF885) 65 607 6.1E-180 T 11-10-2018 IPR010281 Protein of unknown function DUF885 AVL55_05355 3ab653cb5677aa97c90f2d08c07fc108 102 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 12 97 1.1E-13 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AVL55_05355 3ab653cb5677aa97c90f2d08c07fc108 102 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 102 21.97 T 11-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 AVL55_05355 3ab653cb5677aa97c90f2d08c07fc108 102 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 8 100 7.8E-12 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AVL55_03600 804824c772e949a919e903827b947f9b 221 Gene3D G3DSA:3.10.450.710 25 205 3.4E-46 T 11-10-2018 AVL55_03600 804824c772e949a919e903827b947f9b 221 PIRSF PIRSF004649 1 212 5.1E-64 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AVL55_03600 804824c772e949a919e903827b947f9b 221 Pfam PF05494 MlaC protein 34 199 5.7E-51 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AVL55_00445 72631864e5e909f6498fa54a8cec1b5b 377 Pfam PF13511 Domain of unknown function (DUF4124) 117 140 9.8E-5 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 AVL55_14925 b750100d570c9c747e684d48db93de3c 287 Pfam PF01774 UreD urease accessory protein 42 260 7.2E-41 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AVL55_14925 b750100d570c9c747e684d48db93de3c 287 Hamap MF_01384 Urease accessory protein UreD [ureD]. 1 271 24.273 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AVL55_01195 e4549d33632e66809b1c5dbb5a21882f 89 SUPERFAMILY SSF52172 12 78 3.42E-13 T 11-10-2018 IPR011006 CheY-like superfamily AVL55_01195 e4549d33632e66809b1c5dbb5a21882f 89 Pfam PF00072 Response regulator receiver domain 14 73 3.4E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AVL55_01195 e4549d33632e66809b1c5dbb5a21882f 89 Gene3D G3DSA:3.40.50.2300 10 82 2.7E-12 T 11-10-2018 AVL55_18395 5b39563a111edeab58618da4d3cef435 392 Pfam PF04235 Protein of unknown function (DUF418) 219 373 2.0E-21 T 11-10-2018 IPR007349 Domain of unknown function DUF418 AVL55_05400 7c8b9ef6680f2dd9b03611e6faf26ad3 227 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 217 6.0E-94 T 11-10-2018 IPR014319 Phage shock protein, PspA AVL55_05400 7c8b9ef6680f2dd9b03611e6faf26ad3 227 Pfam PF04012 PspA/IM30 family 2 215 7.6E-45 T 11-10-2018 IPR007157 PspA/IM30 AVL55_14180 987e2874c91580f5b92eac9ed4fae21c 205 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 115 190 5.5E-16 T 11-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal AVL55_12955 966e28a8cd061a0560cc61ea93a99d9b 231 SUPERFAMILY SSF47473 26 222 3.88E-14 T 11-10-2018 IPR011992 EF-hand domain pair AVL55_12955 966e28a8cd061a0560cc61ea93a99d9b 231 Pfam PF13202 EF hand 28 46 0.12 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AVL55_12955 966e28a8cd061a0560cc61ea93a99d9b 231 Pfam PF13202 EF hand 173 188 0.009 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AVL55_12955 966e28a8cd061a0560cc61ea93a99d9b 231 Gene3D G3DSA:1.10.238.10 19 78 1.0E-7 T 11-10-2018 AVL55_12955 966e28a8cd061a0560cc61ea93a99d9b 231 Gene3D G3DSA:1.10.238.10 139 226 4.2E-8 T 11-10-2018 AVL55_01365 54c33f2988ecef620b8fa0740b8779b7 156 Pfam PF13474 SnoaL-like domain 44 155 2.3E-9 T 11-10-2018 IPR037401 SnoaL-like domain AVL55_01365 54c33f2988ecef620b8fa0740b8779b7 156 Gene3D G3DSA:3.10.450.50 32 155 1.3E-34 T 11-10-2018 AVL55_01365 54c33f2988ecef620b8fa0740b8779b7 156 SUPERFAMILY SSF54427 42 155 4.28E-24 T 11-10-2018 IPR032710 NTF2-like domain superfamily AVL55_16125 4b71f90a24d1b609e3b1227656ce59fb 377 Pfam PF13795 HupE / UreJ protein 189 350 1.5E-41 T 11-10-2018 IPR032809 Putative HupE/UreJ protein AVL55_01455 b500981e8f4c9889c11db279e652bdd0 297 SUPERFAMILY SSF103481 39 135 7.19E-14 T 11-10-2018 AVL55_01455 b500981e8f4c9889c11db279e652bdd0 297 Pfam PF00892 EamA-like transporter family 1 132 4.9E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_01455 b500981e8f4c9889c11db279e652bdd0 297 Pfam PF00892 EamA-like transporter family 148 290 2.5E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AVL55_01455 b500981e8f4c9889c11db279e652bdd0 297 SUPERFAMILY SSF103481 185 293 5.49E-9 T 11-10-2018 AVL55_02760 327d7dca936fbeb255f3631a5997ce8a 295 Pfam PF12048 Protein of unknown function (DUF3530) 36 264 6.4E-17 T 11-10-2018 IPR022529 Protein of unknown function DUF3530 AVL55_03630 0f982ab3cf5342f3a3ebb03a0bf15ddd 144 Pfam PF06295 Protein of unknown function (DUF1043) 7 133 3.9E-22 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 AVL55_11280 d0898edad4a4783ebfa2d0b85668ccb7 140 Pfam PF09842 Predicted membrane protein (DUF2069) 11 113 9.8E-34 T 11-10-2018 IPR018643 Protein of unknown function DUF2069, membrane AVL55_18130 2d173aaac63c959e3e86621892d8228a 365 PIRSF PIRSF000138 4 365 5.1E-119 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AVL55_18130 2d173aaac63c959e3e86621892d8228a 365 Pfam PF01070 FMN-dependent dehydrogenase 23 362 1.3E-118 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AVL55_18130 2d173aaac63c959e3e86621892d8228a 365 Gene3D G3DSA:3.20.20.70 12 364 9.1E-123 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AVL55_18130 2d173aaac63c959e3e86621892d8228a 365 SUPERFAMILY SSF51395 14 362 2.69E-92 T 11-10-2018 AVL55_04445 bce3589d3f58724027002f4e07161787 179 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 29 176 1.1E-47 T 11-10-2018 IPR008136 CinA, C-terminal AVL55_04445 bce3589d3f58724027002f4e07161787 179 Pfam PF02464 Competence-damaged protein 27 176 3.3E-54 T 11-10-2018 IPR008136 CinA, C-terminal AVL55_04445 bce3589d3f58724027002f4e07161787 179 SUPERFAMILY SSF142433 24 176 2.22E-52 T 11-10-2018 IPR036653 CinA-like, C-terminal AVL55_04445 bce3589d3f58724027002f4e07161787 179 Gene3D G3DSA:3.90.950.20 9 177 1.7E-56 T 11-10-2018 IPR036653 CinA-like, C-terminal AVL55_17955 0c44ac338979a7e9d393b96c3afa475f 200 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 189 8.3E-31 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AVL55_17955 0c44ac338979a7e9d393b96c3afa475f 200 Pfam PF01914 MarC family integral membrane protein 4 192 2.9E-54 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AVL55_01315 1f587e9e2ec290d54cd8b82385819b75 135 Gene3D G3DSA:1.10.3830.10 16 135 1.8E-31 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AVL55_01315 1f587e9e2ec290d54cd8b82385819b75 135 Pfam PF01219 Prokaryotic diacylglycerol kinase 30 130 1.1E-27 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AVL55_07710 86c1849b7f780f58deda6e13c6a9184b 282 Pfam PF01226 Formate/nitrite transporter 9 257 2.6E-64 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AVL55_07710 86c1849b7f780f58deda6e13c6a9184b 282 Gene3D G3DSA:1.20.1080.10 1 249 2.3E-66 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AVL55_19475 80aa78eafa4a8ff075e018c76e362d6e 82 Pfam PF04102 SlyX 19 82 4.2E-23 T 11-10-2018 IPR007236 SlyX AVL55_19475 80aa78eafa4a8ff075e018c76e362d6e 82 Hamap MF_00715 Protein SlyX [slyX]. 15 82 15.868 T 11-10-2018 IPR007236 SlyX AVL55_09840 7068c2c87233df0c5734353fcffaf764 184 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 36 165 3.8E-7 T 11-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) AVL55_03315 ade3cb36a3530ca9821b01d82b5fa6e8 275 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 6 265 3.9E-88 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AVL55_03315 ade3cb36a3530ca9821b01d82b5fa6e8 275 SUPERFAMILY SSF56300 4 262 5.99E-54 T 11-10-2018 AVL55_03315 ade3cb36a3530ca9821b01d82b5fa6e8 275 Pfam PF00149 Calcineurin-like phosphoesterase 6 156 5.2E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AVL55_03315 ade3cb36a3530ca9821b01d82b5fa6e8 275 Gene3D G3DSA:3.60.21.10 5 275 2.1E-74 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AVL55_03315 ade3cb36a3530ca9821b01d82b5fa6e8 275 PRINTS PR00114 Serine/threonine phosphatase family signature 5 32 4.0E-6 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_03315 ade3cb36a3530ca9821b01d82b5fa6e8 275 PRINTS PR00114 Serine/threonine phosphatase family signature 103 129 4.0E-6 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_03315 ade3cb36a3530ca9821b01d82b5fa6e8 275 PRINTS PR00114 Serine/threonine phosphatase family signature 35 62 4.0E-6 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AVL55_03315 ade3cb36a3530ca9821b01d82b5fa6e8 275 PIRSF PIRSF000903 4 275 1.9E-101 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AVL55_19870 b3cb75a95d9a4e44ba056ce226dbd0df 252 Pfam PF13586 Transposase DDE domain 163 248 5.2E-17 T 11-10-2018 IPR025668 Transposase DDE domain AVL55_19870 b3cb75a95d9a4e44ba056ce226dbd0df 252 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 77 1.5E-26 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AVL55_11495 90ffbb373792fbe2655ed9e97fb2cdd2 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AVL55_11495 90ffbb373792fbe2655ed9e97fb2cdd2 250 SUPERFAMILY SSF52402 1 242 1.88E-84 T 11-10-2018 AVL55_11495 90ffbb373792fbe2655ed9e97fb2cdd2 250 Gene3D G3DSA:3.40.50.620 1 248 3.1E-87 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AVL55_11495 90ffbb373792fbe2655ed9e97fb2cdd2 250 PIRSF PIRSF000090 1 249 4.8E-83 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AVL55_11495 90ffbb373792fbe2655ed9e97fb2cdd2 250 Pfam PF01012 Electron transfer flavoprotein domain 31 206 6.9E-46 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AVL55_11495 90ffbb373792fbe2655ed9e97fb2cdd2 250 SMART SM00893 23 211 3.6E-66 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AVL55_19280 b5f76791610524fff83022cf0131741e 311 Gene3D G3DSA:1.10.287.70 26 253 1.6E-59 T 11-10-2018 AVL55_19280 b5f76791610524fff83022cf0131741e 311 SUPERFAMILY SSF81324 21 249 1.83E-51 T 11-10-2018 AVL55_19280 b5f76791610524fff83022cf0131741e 311 Pfam PF00520 Ion transport protein 27 254 4.6E-34 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AVL55_19280 b5f76791610524fff83022cf0131741e 311 PRINTS PR00169 Potassium channel signature 194 216 4.4E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AVL55_19280 b5f76791610524fff83022cf0131741e 311 PRINTS PR00169 Potassium channel signature 62 85 4.4E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AVL55_19280 b5f76791610524fff83022cf0131741e 311 PRINTS PR00169 Potassium channel signature 223 249 4.4E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AVL55_19280 b5f76791610524fff83022cf0131741e 311 PRINTS PR00169 Potassium channel signature 134 160 4.4E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AVL55_19280 b5f76791610524fff83022cf0131741e 311 PRINTS PR00169 Potassium channel signature 20 48 4.4E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AVL55_19280 b5f76791610524fff83022cf0131741e 311 PRINTS PR00169 Potassium channel signature 163 186 4.4E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AVL55_05980 79dbb4559c154c26704720be23fd882f 1221 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 783 918 1.7E-15 T 11-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AVL55_05980 79dbb4559c154c26704720be23fd882f 1221 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 1064 1139 2.6E-27 T 11-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AVL55_05715 a72f582ff83d90fdf126053d14366026 149 Gene3D G3DSA:2.10.109.10 32 147 2.3E-48 T 11-10-2018 AVL55_05715 a72f582ff83d90fdf126053d14366026 149 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 59 69 3.9E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AVL55_05715 a72f582ff83d90fdf126053d14366026 149 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 70 81 3.9E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AVL55_05715 a72f582ff83d90fdf126053d14366026 149 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 98 110 3.9E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AVL55_05715 a72f582ff83d90fdf126053d14366026 149 Pfam PF00717 Peptidase S24-like 62 128 5.1E-14 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AVL55_05715 a72f582ff83d90fdf126053d14366026 149 SUPERFAMILY SSF51306 21 143 4.71E-35 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AVL55_03485 0c30c7133ae4302ef6b18b6158102d60 299 SUPERFAMILY SSF53850 36 248 7.82E-13 T 11-10-2018 AVL55_17295 5738fc7db4b0c2ab462f47343668374f 345 SUPERFAMILY SSF52540 3 223 1.68E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_07685 c2cdd7c951653b5966d85107d6affa7c 155 Pfam PF04241 Protein of unknown function (DUF423) 29 115 3.3E-30 T 11-10-2018 IPR006696 Protein of unknown function DUF423 AVL55_01470 b79bfc266b435c8a68b8bbf5d215edd6 107 Pfam PF11872 Protein of unknown function (DUF3392) 2 104 3.4E-35 T 11-10-2018 IPR021813 Protein of unknown function DUF3392 AVL55_10765 43f12502da86e6e116d1afeb5d3decec 76 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 3.9E-20 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AVL55_10765 43f12502da86e6e116d1afeb5d3decec 76 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 5.2E-14 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AVL55_14110 aebb1a9b60c935e5b2363049adb83998 806 Pfam PF04892 VanZ like family 323 462 2.6E-9 T 11-10-2018 IPR006976 VanZ-like AVL55_14110 aebb1a9b60c935e5b2363049adb83998 806 Pfam PF04892 VanZ like family 75 157 1.9E-7 T 11-10-2018 IPR006976 VanZ-like AVL55_05855 63fcd29960cc182898248d6d30a52998 216 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 128 173 2.6E-14 T 11-10-2018 IPR014118 Type IV conjugative transfer system protein TraV AVL55_12050 941a4866089ba7e4eb42c36ff160cc54 980 Pfam PF03993 Domain of Unknown Function (DUF349) 610 682 7.6E-9 T 11-10-2018 IPR007139 Protein of unknown function DUF349 AVL55_12050 941a4866089ba7e4eb42c36ff160cc54 980 Pfam PF03993 Domain of Unknown Function (DUF349) 702 750 1.6E-6 T 11-10-2018 IPR007139 Protein of unknown function DUF349 AVL55_11975 53901035325984dff976c5973a11d1f5 116 Gene3D G3DSA:3.40.250.10 3 104 9.3E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_11975 53901035325984dff976c5973a11d1f5 116 Pfam PF00581 Rhodanese-like domain 23 103 7.1E-8 T 11-10-2018 IPR001763 Rhodanese-like domain AVL55_11975 53901035325984dff976c5973a11d1f5 116 SUPERFAMILY SSF52821 15 103 5.62E-21 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AVL55_06475 eed794286ef6bcd6f397734c41dd78ee 298 SUPERFAMILY SSF53850 48 252 8.47E-14 T 11-10-2018 AVL55_06475 eed794286ef6bcd6f397734c41dd78ee 298 Gene3D G3DSA:3.40.190.10 50 250 1.3E-6 T 11-10-2018 AVL55_06475 eed794286ef6bcd6f397734c41dd78ee 298 Gene3D G3DSA:3.40.190.10 116 215 1.3E-6 T 11-10-2018 AVL55_18305 cea715408da1c4f410f5249a76f19ece 230 Pfam PF07947 YhhN family 28 212 2.0E-35 T 11-10-2018 IPR012506 YhhN-like GO:0016021 AVL55_07215 46abffa3475aaa6e957fb3d3128acdd1 840 Pfam PF02687 FtsX-like permease family 743 830 7.3E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AVL55_07215 46abffa3475aaa6e957fb3d3128acdd1 840 Pfam PF02687 FtsX-like permease family 289 376 4.9E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AVL55_06890 f666c0f7c0a0ec767231601abf4a88fc 408 Pfam PF07396 Phosphate-selective porin O and P 87 375 4.4E-13 T 11-10-2018 IPR010870 Phosphate-selective porin O/P AVL55_06890 f666c0f7c0a0ec767231601abf4a88fc 408 Gene3D G3DSA:2.40.160.10 19 404 2.7E-28 T 11-10-2018 IPR023614 Porin domain superfamily AVL55_06890 f666c0f7c0a0ec767231601abf4a88fc 408 SUPERFAMILY SSF56935 57 408 9.16E-5 T 11-10-2018 AVL55_13990 5f7247178d3eca71a39ec33133f70a2b 377 Pfam PF14907 Uncharacterised nucleotidyltransferase 24 279 1.1E-31 T 11-10-2018 IPR039498 Uncharacterised nucleotidyltransferase AVL55_15825 6565762aae97ec35380f0c2bd6663f35 133 Pfam PF11026 Protein of unknown function (DUF2721) 6 118 9.1E-33 T 11-10-2018 IPR021279 Protein of unknown function DUF2721 AVL55_19390 04c14b38ddd2e794f5431a947acf6f4f 477 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 473 2.4E-65 T 11-10-2018 IPR010352 Protein of unknown function DUF945 AVL55_01655 dede27f23ad89352e51c9463675de057 283 SUPERFAMILY SSF101898 47 266 9.94E-8 T 11-10-2018 AVL55_09805 c3b5f959e6fe3c3ff5d9baa31d2a68b7 153 Pfam PF06127 Protein of unknown function (DUF962) 1 148 9.4E-21 T 11-10-2018 IPR009305 Protein of unknown function DUF962 AVL55_07180 4c8782fb3057c0af4fd8a0210714dea1 301 Gene3D G3DSA:3.40.630.10 1 301 6.2E-114 T 11-10-2018 AVL55_07180 4c8782fb3057c0af4fd8a0210714dea1 301 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 77 175 3.9E-7 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AVL55_07180 4c8782fb3057c0af4fd8a0210714dea1 301 SUPERFAMILY SSF53187 36 288 1.89E-33 T 11-10-2018 AVL55_09065 84456e0741198d32c5dfc6964f77b97f 138 Pfam PF16108 Domain of unknown function (DUF4826) 13 137 4.0E-49 T 11-10-2018 IPR032251 Protein of unknown function DUF4826 AVL55_12490 4ca45a1fc5e134beb94deedfae598d2d 204 Pfam PF07290 Protein of unknown function (DUF1449) 10 203 8.0E-62 T 11-10-2018 IPR010840 Protein of unknown function DUF1449 AVL55_04325 40bcbdc5d7d6630565bc52f234644a6b 133 Pfam PF03788 LrgA family 19 110 3.0E-18 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 AVL55_13505 f757e11910424fcb112f11323c70148a 184 SUPERFAMILY SSF54523 22 91 5.02E-12 T 11-10-2018 AVL55_13505 f757e11910424fcb112f11323c70148a 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 20 41 1.3E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_13505 f757e11910424fcb112f11323c70148a 184 Gene3D G3DSA:3.30.700.10 22 171 1.1E-10 T 11-10-2018 AVL55_13505 f757e11910424fcb112f11323c70148a 184 PIRSF PIRSF021292 16 174 1.2E-15 T 11-10-2018 IPR016785 ComG operon protein 4 GO:0030420 AVL55_13505 f757e11910424fcb112f11323c70148a 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 6.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AVL55_13505 f757e11910424fcb112f11323c70148a 184 PRINTS PR00813 Bacterial general secretion pathway protein G signature 21 46 2.1E-6 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AVL55_13505 f757e11910424fcb112f11323c70148a 184 PRINTS PR00813 Bacterial general secretion pathway protein G signature 57 75 2.1E-6 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AVL55_12290 3321a533cea21cd6a10be380d8b42a57 339 SUPERFAMILY SSF46785 12 56 4.31E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AVL55_12290 3321a533cea21cd6a10be380d8b42a57 339 Pfam PF13280 WYL domain 156 329 2.0E-29 T 11-10-2018 IPR026881 WYL domain AVL55_08205 9367f43f6e1035d3502b2af80e56b774 486 Pfam PF13440 Polysaccharide biosynthesis protein 32 317 2.3E-53 T 11-10-2018 AVL55_00195 9bda4ebd12dc7f385152139db7f3f2b8 263 SUPERFAMILY SSF53850 30 238 1.49E-10 T 11-10-2018 AVL55_01500 8a1c66cc366b421e82475a89d4e42151 309 Pfam PF01261 Xylose isomerase-like TIM barrel 124 255 2.3E-18 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AVL55_01500 8a1c66cc366b421e82475a89d4e42151 309 Gene3D G3DSA:3.20.20.150 56 303 1.1E-47 T 11-10-2018 AVL55_01500 8a1c66cc366b421e82475a89d4e42151 309 SUPERFAMILY SSF51658 58 296 4.84E-56 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AVL55_01500 8a1c66cc366b421e82475a89d4e42151 309 PIRSF PIRSF006241 56 305 3.6E-38 T 11-10-2018 IPR026040 Hydroxypyruvate isomerase-like AVL55_19680 9d39fd9a94c6338e928452e58bc2b465 1292 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 906 1247 9.1E-49 T 11-10-2018 IPR007452 Translocation and assembly module TamB AVL55_03295 4496010d5431d9da1cc12ab9b8b30d0e 149 Pfam PF02643 Uncharacterized ACR, COG1430 46 148 5.6E-32 T 11-10-2018 IPR003795 Protein of unknown function DUF192 AVL55_03295 4496010d5431d9da1cc12ab9b8b30d0e 149 Gene3D G3DSA:2.60.120.1140 27 149 3.4E-39 T 11-10-2018 IPR038695 Saro_0823-like superfamily AVL55_08810 878239accb3659b7a66ce7c3ce3ba82c 61 Pfam PF08085 Entericidin EcnA/B family 37 56 2.8E-9 T 11-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AVL55_17455 cf757b8555ff554fd359a3e0d37eed96 442 SUPERFAMILY SSF52540 5 139 2.0E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_17455 cf757b8555ff554fd359a3e0d37eed96 442 Gene3D G3DSA:3.40.50.300 2 234 2.6E-7 T 11-10-2018 AVL55_04345 55aeca2a9ab4897b8f8e60a58e986210 592 Pfam PF07603 Protein of unknown function (DUF1566) 433 589 4.2E-29 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AVL55_04345 55aeca2a9ab4897b8f8e60a58e986210 592 Gene3D G3DSA:2.60.40.10 162 247 1.6E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_04345 55aeca2a9ab4897b8f8e60a58e986210 592 Gene3D G3DSA:2.60.40.10 262 355 2.3E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_04345 55aeca2a9ab4897b8f8e60a58e986210 592 Gene3D G3DSA:2.60.40.10 50 146 2.0E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold AVL55_04530 9cde132a90b0c940c45e08fad48d81e8 131 SUPERFAMILY SSF46689 13 108 3.4E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AVL55_10580 90db9ff3a104adf60de5cd62efde566d 243 Pfam PF05901 Excalibur calcium-binding domain 210 243 5.0E-8 T 11-10-2018 IPR008613 Excalibur calcium-binding domain AVL55_10580 90db9ff3a104adf60de5cd62efde566d 243 SMART SM00894 207 243 7.5E-6 T 11-10-2018 IPR008613 Excalibur calcium-binding domain AVL55_00535 3efd327638543f9f746a6a37643e462c 390 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 52 381 2.1E-75 T 11-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AVL55_15465 835e28a063c31525db3e8c9f476e932a 120 Gene3D G3DSA:3.30.1060.10 1 99 2.3E-20 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AVL55_15465 835e28a063c31525db3e8c9f476e932a 120 Pfam PF01625 Peptide methionine sulfoxide reductase 2 94 5.5E-19 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AVL55_15465 835e28a063c31525db3e8c9f476e932a 120 SUPERFAMILY SSF55068 2 106 8.76E-27 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AVL55_14135 2c50ea609775f999462be060c5e79f4e 470 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 469 2.0E-106 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AVL55_14135 2c50ea609775f999462be060c5e79f4e 470 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 28 469 1.7E-160 T 11-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated AVL55_14135 2c50ea609775f999462be060c5e79f4e 470 Pfam PF02397 Bacterial sugar transferase 282 465 9.1E-62 T 11-10-2018 IPR003362 Bacterial sugar transferase AVL55_14135 2c50ea609775f999462be060c5e79f4e 470 Gene3D G3DSA:3.40.50.720 141 258 2.2E-7 T 11-10-2018 AVL55_01310 d8a4e81378eb2bbaba265d2eed19f14d 71 Pfam PF13127 Protein of unknown function (DUF3955) 7 64 1.5E-13 T 11-10-2018 IPR025016 Protein of unknown function DUF3955 AVL55_08075 162d60788663168f347222e0322578d4 393 Pfam PF11279 Protein of unknown function (DUF3080) 46 389 4.9E-87 T 11-10-2018 IPR021431 Protein of unknown function DUF3080 AVL55_10810 9d974d0082d2ce1e002cb285a0729f78 208 PIRSF PIRSF006324 1 208 9.4E-45 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AVL55_10810 9d974d0082d2ce1e002cb285a0729f78 208 Pfam PF01810 LysE type translocator 16 207 1.2E-28 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AVL55_12170 2dab19ca37f397b7247ada6a0bd8e54a 268 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 12 240 4.1E-63 T 11-10-2018 IPR023875 DNA metabolism protein, putative AVL55_12170 2dab19ca37f397b7247ada6a0bd8e54a 268 Pfam PF13566 Domain of unknown function (DUF4130 81 239 2.2E-37 T 11-10-2018 IPR025404 Domain of unknown function DUF4130 AVL55_12255 0cc9ba4ac000caf320e3adc7a6acb08e 288 SUPERFAMILY SSF52317 34 283 2.81E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_12255 0cc9ba4ac000caf320e3adc7a6acb08e 288 Pfam PF01965 DJ-1/PfpI family 61 182 3.6E-12 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AVL55_12255 0cc9ba4ac000caf320e3adc7a6acb08e 288 Gene3D G3DSA:3.40.50.880 2 288 6.9E-76 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AVL55_16090 a4387a06c5e145050c8cf0e10110643d 130 SUPERFAMILY SSF56935 29 126 5.49E-12 T 11-10-2018 AVL55_16090 a4387a06c5e145050c8cf0e10110643d 130 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 127 1.5E-7 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AVL55_16090 a4387a06c5e145050c8cf0e10110643d 130 Gene3D G3DSA:2.170.130.10 33 130 3.4E-7 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AVL55_10740 daa80f1470f5713469127445831bece0 201 SUPERFAMILY SSF46626 17 197 6.42E-31 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_10740 daa80f1470f5713469127445831bece0 201 Gene3D G3DSA:1.10.760.10 42 201 6.1E-76 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AVL55_10740 daa80f1470f5713469127445831bece0 201 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 182 1.2E-83 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AVL55_10740 daa80f1470f5713469127445831bece0 201 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 199 1.4E-84 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AVL55_04080 21192508e63015e2130b6dea12767aba 107 Pfam PF12514 Protein of unknown function (DUF3718) 38 93 2.0E-13 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 AVL55_14045 06bb58daa6acb0c19d6cb4f10d813ec7 338 Gene3D G3DSA:3.20.20.370 1 326 6.9E-26 T 11-10-2018 AVL55_14045 06bb58daa6acb0c19d6cb4f10d813ec7 338 SUPERFAMILY SSF88713 37 204 3.61E-11 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AVL55_18045 86616ee3cf3c5bdb8049bf4fc5e26fbc 360 Pfam PF01595 Domain of unknown function DUF21 8 177 2.4E-29 T 11-10-2018 IPR002550 CNNM, transmembrane domain AVL55_18045 86616ee3cf3c5bdb8049bf4fc5e26fbc 360 SUPERFAMILY SSF54631 184 319 2.02E-25 T 11-10-2018 AVL55_18045 86616ee3cf3c5bdb8049bf4fc5e26fbc 360 SMART SM00116 203 253 51.0 T 11-10-2018 IPR000644 CBS domain AVL55_18045 86616ee3cf3c5bdb8049bf4fc5e26fbc 360 SMART SM00116 267 315 0.012 T 11-10-2018 IPR000644 CBS domain AVL55_18045 86616ee3cf3c5bdb8049bf4fc5e26fbc 360 Gene3D G3DSA:3.10.580.10 174 327 4.0E-35 T 11-10-2018 AVL55_18045 86616ee3cf3c5bdb8049bf4fc5e26fbc 360 Pfam PF00571 CBS domain 266 315 2.1E-8 T 11-10-2018 IPR000644 CBS domain AVL55_17815 d7273cad5e4e3af1811c32bff2cbb84e 113 Pfam PF14076 Domain of unknown function (DUF4258) 36 111 3.2E-6 T 11-10-2018 IPR025354 Protein of unknown function DUF4258 AVL55_16040 8c87896f215637ba31f0d555ec92b262 68 SUPERFAMILY SSF47598 4 48 2.56E-9 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AVL55_16040 8c87896f215637ba31f0d555ec92b262 68 Gene3D G3DSA:1.10.1220.10 1 50 1.8E-6 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AVL55_04995 6f3efcc9d3b1e70e504dba1dc3094e63 384 Pfam PF05893 Acyl-CoA reductase (LuxC) 82 274 7.4E-29 T 11-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 AVL55_04995 6f3efcc9d3b1e70e504dba1dc3094e63 384 SUPERFAMILY SSF53720 82 271 2.32E-5 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AVL55_01125 ba92f97ab5c69de2a533c771e5dc4fc7 194 SMART SM01038 2 190 2.4E-24 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AVL55_01125 ba92f97ab5c69de2a533c771e5dc4fc7 194 SUPERFAMILY SSF74650 2 189 8.48E-53 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AVL55_01125 ba92f97ab5c69de2a533c771e5dc4fc7 194 Gene3D G3DSA:2.70.98.10 1 192 5.0E-55 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AVL55_01125 ba92f97ab5c69de2a533c771e5dc4fc7 194 Pfam PF02929 Beta galactosidase small chain 12 188 8.6E-43 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AVL55_00580 5e9110460991d04ca2bae38b1e2d59f4 235 Pfam PF00588 SpoU rRNA Methylase family 20 158 1.0E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AVL55_00580 5e9110460991d04ca2bae38b1e2d59f4 235 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 194 36.488 T 11-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AVL55_00580 5e9110460991d04ca2bae38b1e2d59f4 235 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 214 1.3E-19 T 11-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AVL55_00580 5e9110460991d04ca2bae38b1e2d59f4 235 Gene3D G3DSA:3.40.1280.10 1 200 8.1E-63 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AVL55_00580 5e9110460991d04ca2bae38b1e2d59f4 235 SUPERFAMILY SSF75217 4 183 1.77E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AVL55_12760 fae1853e28ca9baa11fcf26118dc42f4 387 Pfam PF01513 ATP-NAD kinase 18 381 1.3E-40 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AVL55_12760 fae1853e28ca9baa11fcf26118dc42f4 387 SUPERFAMILY SSF111331 85 154 1.13E-6 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AVL55_12760 fae1853e28ca9baa11fcf26118dc42f4 387 PIRSF PIRSF016907 15 387 1.4E-120 T 11-10-2018 IPR011386 Putative ATP-NAD kinase AVL55_12175 be986f143ef184beda039baa9d8438a3 199 Pfam PF04972 BON domain 35 101 3.4E-18 T 11-10-2018 IPR007055 BON domain AVL55_12175 be986f143ef184beda039baa9d8438a3 199 Pfam PF04972 BON domain 126 193 1.1E-19 T 11-10-2018 IPR007055 BON domain AVL55_12175 be986f143ef184beda039baa9d8438a3 199 SMART SM00749 131 194 5.5E-10 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AVL55_12175 be986f143ef184beda039baa9d8438a3 199 SMART SM00749 39 102 0.02 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AVL55_01260 d48da2ffa636516823185e669415d954 217 Gene3D G3DSA:1.20.120.1630 7 208 3.0E-24 T 11-10-2018 AVL55_01260 d48da2ffa636516823185e669415d954 217 Pfam PF04191 Phospholipid methyltransferase 121 192 2.7E-7 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AVL55_03725 da33407be9a8e28ad4b332eec705b090 721 Pfam PF10459 Peptidase S46 22 719 1.2E-258 T 11-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 AVL55_03725 da33407be9a8e28ad4b332eec705b090 721 SUPERFAMILY SSF50494 47 714 1.91E-21 T 11-10-2018 IPR009003 Peptidase S1, PA clan AVL55_17690 4ad2bd7876edced6acd69621104abcb4 211 Pfam PF02036 SCP-2 sterol transfer family 15 120 1.5E-11 T 11-10-2018 IPR003033 SCP2 sterol-binding domain AVL55_12765 40563ad3f4e755c8fbf42b926161a503 236 Pfam PF04315 Elongation factor P hydroxylase 58 211 1.9E-73 T 11-10-2018 IPR007411 Elongation factor P hydroxylase AVL55_17150 47d4c08f56dd866c87c61ca8d95d56a4 139 SUPERFAMILY SSF161084 9 131 1.57E-20 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AVL55_17150 47d4c08f56dd866c87c61ca8d95d56a4 139 Pfam PF01124 MAPEG family 10 134 9.9E-18 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AVL55_17150 47d4c08f56dd866c87c61ca8d95d56a4 139 Gene3D G3DSA:1.20.120.550 1 136 1.2E-19 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AVL55_06090 90fe0e988b0c7bfc98dd56929b05fc16 314 Gene3D G3DSA:3.40.30.10 149 259 3.3E-8 T 11-10-2018 AVL55_06090 90fe0e988b0c7bfc98dd56929b05fc16 314 SUPERFAMILY SSF52833 167 259 3.31E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AVL55_06090 90fe0e988b0c7bfc98dd56929b05fc16 314 TIGRFAM TIGR02740 TraF-like: TraF-like protein 10 270 1.3E-107 T 11-10-2018 IPR014111 Type IV conjugative transfer system protein TraF-like AVL55_06090 90fe0e988b0c7bfc98dd56929b05fc16 314 Pfam PF13728 F plasmid transfer operon protein 41 260 1.6E-75 T 11-10-2018 IPR039555 F plasmid transfer operon protein AVL55_07385 1d5977ab4cb23664fca763a1b9c6bcbd 431 Pfam PF02447 GntP family permease 5 238 3.7E-8 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AVL55_05800 146c87efdeb096be457ecb3959ea67d6 211 Pfam PF14348 Domain of unknown function (DUF4400) 33 209 9.3E-25 T 11-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type AVL55_20060 9b4295d7f842e198fc28092e3b9e9f8c 222 Gene3D G3DSA:1.10.8.1180 105 183 2.0E-13 T 11-10-2018 AVL55_19510 38d0ef8cd497789466670bab4d435205 316 Pfam PF12118 SprA-related family 58 226 3.2E-42 T 11-10-2018 IPR021973 SprA-related family AVL55_11985 17b14e8fae4d8832c63e2c025bd079f5 201 PIRSF PIRSF033239 3 200 1.3E-46 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AVL55_11985 17b14e8fae4d8832c63e2c025bd079f5 201 Pfam PF06055 Exopolysaccharide synthesis, ExoD 14 191 3.9E-43 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AVL55_17260 d6bbd69a9160266b25cc15f2afe949ce 398 SUPERFAMILY SSF53448 13 135 2.06E-5 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AVL55_17260 d6bbd69a9160266b25cc15f2afe949ce 398 Pfam PF13704 Glycosyl transferase family 2 13 122 7.1E-12 T 11-10-2018 AVL55_18865 9c310806c0b9aded41545e30bef6ec31 147 Pfam PF11026 Protein of unknown function (DUF2721) 15 141 9.2E-37 T 11-10-2018 IPR021279 Protein of unknown function DUF2721 AVL55_19855 339d5d7946c90fb362d97da93c44552e 416 Pfam PF07804 HipA-like C-terminal domain 182 392 2.6E-51 T 11-10-2018 IPR012893 HipA-like, C-terminal AVL55_19855 339d5d7946c90fb362d97da93c44552e 416 Pfam PF13657 HipA N-terminal domain 20 97 2.8E-5 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AVL55_12995 17e95aa846ec4d201638e8d4d1b829b4 190 Pfam PF04366 Las17-binding protein actin regulator 102 190 2.7E-10 T 11-10-2018 IPR007461 Ysc84 actin-binding domain AVL55_04350 0f3c239c66982338d6df0c371c1d5d35 168 Pfam PF07603 Protein of unknown function (DUF1566) 40 163 2.8E-28 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AVL55_06920 cc9080360136f33e9e01c2d60d3b9065 188 Pfam PF01292 Prokaryotic cytochrome b561 9 183 3.0E-27 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AVL55_06920 cc9080360136f33e9e01c2d60d3b9065 188 SUPERFAMILY SSF81342 6 183 6.28E-31 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AVL55_14190 c6076fc3e93b89fab3453961da74cf24 85 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 5.4E-32 T 11-10-2018 IPR021432 Protein of unknown function DUF3081 AVL55_08530 40850f440b0a52005b2a1aafb33ebc8d 496 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 63 449 4.8E-126 T 11-10-2018 IPR020010 Conserved hypothetical protein CHP03503 AVL55_01090 d17a97c4e6f5c63688350414d67918b5 1331 Pfam PF13502 AsmA-like C-terminal region 1046 1287 2.3E-47 T 11-10-2018 IPR032712 AsmA-like, C-terminal AVL55_01090 d17a97c4e6f5c63688350414d67918b5 1331 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 11 1296 2.9E-243 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 AVL55_01090 d17a97c4e6f5c63688350414d67918b5 1331 Pfam PF13116 Protein of unknown function 503 786 5.4E-72 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 AVL55_01975 536a76a8f4700089a3611e592b7d0b7c 81 Pfam PF14019 Protein of unknown function (DUF4235) 14 72 3.0E-14 T 11-10-2018 IPR025329 Protein of unknown function DUF4235 AVL55_10695 b0990fee345fd109b57d215647fd5a65 118 Gene3D G3DSA:1.10.3830.10 2 118 4.1E-36 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AVL55_10695 b0990fee345fd109b57d215647fd5a65 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 8.0E-33 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AVL55_11295 54161751d710132b2dc21b7ca618a3fb 446 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 39 351 1.4E-63 T 11-10-2018 IPR018642 Protein of unknown function DUF2066 AVL55_16860 0caaa93f3e1735b2b6a8f450fc934780 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 7.8E-6 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_16860 0caaa93f3e1735b2b6a8f450fc934780 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 7.8E-6 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_16860 0caaa93f3e1735b2b6a8f450fc934780 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 7.8E-6 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_16860 0caaa93f3e1735b2b6a8f450fc934780 473 Pfam PF00209 Sodium:neurotransmitter symporter family 145 463 5.4E-24 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_16860 0caaa93f3e1735b2b6a8f450fc934780 473 Pfam PF00209 Sodium:neurotransmitter symporter family 5 124 2.8E-24 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AVL55_16860 0caaa93f3e1735b2b6a8f450fc934780 473 SUPERFAMILY SSF161070 5 463 2.88E-111 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AVL55_08720 05937fcf5f2806c11a5a2880c7670258 185 Pfam PF12766 Pyridoxamine 5'-phosphate oxidase 1 93 6.2E-24 T 11-10-2018 IPR024624 Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain GO:0010181 AVL55_08720 05937fcf5f2806c11a5a2880c7670258 185 SUPERFAMILY SSF50475 1 185 3.74E-38 T 11-10-2018 AVL55_08720 05937fcf5f2806c11a5a2880c7670258 185 TIGRFAM TIGR04026 PPOX_FMN_cyano: PPOX class probable FMN-dependent enzyme, alr4036 family 1 185 7.6E-67 T 11-10-2018 IPR024015 Pyridoxamine 5'-phosphate oxidase, probable FMN-dependent, Alr4036 family KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AVL55_08720 05937fcf5f2806c11a5a2880c7670258 185 Gene3D G3DSA:2.30.110.10 1 185 1.4E-50 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AVL55_04975 d75a0444c6a6100a815f936bd792a571 79 Gene3D G3DSA:1.10.1200.10 2 76 1.2E-13 T 11-10-2018 IPR036736 ACP-like superfamily AVL55_04975 d75a0444c6a6100a815f936bd792a571 79 SUPERFAMILY SSF47336 5 67 1.44E-7 T 11-10-2018 IPR036736 ACP-like superfamily AVL55_06220 7cc656daedddb5a14fcdfa77a2c24acb 145 Pfam PF09945 Predicted membrane protein (DUF2177) 13 133 4.5E-36 T 11-10-2018 IPR018687 Protein of unknown function DUF2177, membrane AVL55_04355 7a96c205d71dd8a2b163e9a475d87a76 264 Pfam PF11101 Protein of unknown function (DUF2884) 28 256 2.6E-65 T 11-10-2018 IPR021307 Protein of unknown function DUF2884 AVL55_05945 f30d6937d24170eedd99e4a16c639640 66 Pfam PF05717 IS66 Orf2 like protein 9 59 8.4E-13 T 11-10-2018 IPR008878 Transposase IS66, Orf2 AVL55_08120 e1b893631d2b2a3f45c71dac77b1c4af 401 Pfam PF10082 Putative beta-barrel porin 2 25 399 5.8E-32 T 11-10-2018 IPR018759 Putative beta-barrel porin 2 AVL55_08935 25d1f7eae1cb0782119c0b5127b1623a 494 Pfam PF03929 PepSY-associated TM region 11 353 1.9E-54 T 11-10-2018 IPR005625 PepSY-associated TM protein AVL55_04655 7dc118bea44a3eaf5e7724e0dc2638ee 349 Pfam PF12069 Protein of unknown function (DUF3549) 4 344 7.3E-98 T 11-10-2018 IPR021936 Protein of unknown function DUF3549 AVL55_15475 0a12001a01efd73c34bb5ae97e06b26d 240 Pfam PF03591 AzlC protein 19 157 3.9E-39 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease AVL55_00335 a5099c5cad4a9c91243fe32f7e8f4cfa 137 Pfam PF03748 Flagellar basal body-associated protein FliL 32 135 9.3E-18 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AVL55_06980 06c50bf2f2174e8db0dd8d01b4308402 203 SUPERFAMILY SSF159594 40 199 1.05E-18 T 11-10-2018 AVL55_06980 06c50bf2f2174e8db0dd8d01b4308402 203 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 42 195 1.7E-26 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AVL55_16585 db4db738f3225bebb4a0f7b00f067076 156 Pfam PF09990 Predicted membrane protein (DUF2231) 47 147 2.3E-18 T 11-10-2018 IPR019251 Domain of unknown function DUF2231, transmembrane AVL55_11585 8dc7defe0bc494d8d93635570f4bfefa 114 Pfam PF12514 Protein of unknown function (DUF3718) 48 112 7.0E-6 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 AVL55_18770 abb2eadf08f59cfd0739fea605a003cb 77 Pfam PF11127 Protein of unknown function (DUF2892) 4 57 1.2E-13 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 AVL55_06045 e1d23e85cbc7167e3a817884487fe11c 317 Pfam PF11348 Protein of unknown function (DUF3150) 6 259 1.4E-100 T 11-10-2018 IPR021496 Protein of unknown function DUF3150 AVL55_17300 d9f6aa5571cfeb2fe126d83cdfbe11ce 1940 SUPERFAMILY SSF69318 1690 1926 8.37E-11 T 11-10-2018 AVL55_17300 d9f6aa5571cfeb2fe126d83cdfbe11ce 1940 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 195 239 6.6E-7 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AVL55_06265 880eb2b638370a814e0cf9e4b0165edf 188 SUPERFAMILY SSF47226 4 113 3.14E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_06265 880eb2b638370a814e0cf9e4b0165edf 188 Gene3D G3DSA:1.20.120.160 4 113 1.7E-19 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AVL55_06265 880eb2b638370a814e0cf9e4b0165edf 188 Pfam PF01627 Hpt domain 27 108 5.5E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AVL55_17305 f8c4a2da15c7e419a7ad9d9a612f7521 456 Pfam PF04577 Protein of unknown function (DUF563) 88 289 1.0E-24 T 11-10-2018 IPR007657 Glycosyltransferase 61 GO:0016757 AVL55_11960 84cbbbbfc7cb3c45c5ef0ca5ad2ccad5 118 Pfam PF04219 Protein of unknown function, DUF 13 99 4.2E-33 T 11-10-2018 IPR007335 Protein of unknown function DUF413 AVL55_17475 0c3c18e639abfb86ea549cdacc729a29 237 Gene3D G3DSA:3.40.50.300 15 235 1.8E-6 T 11-10-2018 AVL55_17475 0c3c18e639abfb86ea549cdacc729a29 237 SUPERFAMILY SSF52540 32 159 1.43E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AVL55_20030 f3c0f3d3be776a3dcb85db47b1623ba5 128 Pfam PF03899 ATP synthase I chain 17 108 1.4E-14 T 11-10-2018 IPR005598 ATP synthase protein I AVL55_17925 ab68fbb60479c79669e4e666afe618ea 326 PIRSF PIRSF003097 21 322 5.2E-69 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 AVL55_13905 9753d4a56b41db7ce164dd779351a744 214 Pfam PF10679 Protein of unknown function (DUF2491) 1 211 5.9E-81 T 11-10-2018 IPR019621 Protein of unknown function DUF2491 AVL55_12550 4ce848a1e104a8b1aab847e3cfe2a6ce 162 Pfam PF02674 Colicin V production protein 4 141 4.2E-33 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AVL55_17205 0a5be99f4b84ff18dd0dda7c6ee099ce 329 SUPERFAMILY SSF53850 93 264 6.65E-10 T 11-10-2018 AVL55_18050 8cc54529abbe97a2b2f82a26fbf41144 389 Pfam PF03773 Predicted permease 11 327 2.8E-44 T 11-10-2018 IPR005524 Predicted permease DUF318 AVL55_03820 908759dee658989d68fa76f67c363c2f 122 Pfam PF05717 IS66 Orf2 like protein 14 108 6.4E-34 T 11-10-2018 IPR008878 Transposase IS66, Orf2 AVL55_07850 371381bd7ef5336c4f5d640c1a1ea5b9 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 2.7E-21 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AVL55_07850 371381bd7ef5336c4f5d640c1a1ea5b9 253 Pfam PF01609 Transposase DDE domain 89 246 1.2E-17 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AVL55_09780 92306793aaf52cfe1bf316da46c83bdb 368 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 358 4.8E-91 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AVL55_06710 c204e70b8aad84194cec7807905ce76e 209 Pfam PF03458 UPF0126 domain 94 166 1.4E-17 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AVL55_06710 c204e70b8aad84194cec7807905ce76e 209 Pfam PF03458 UPF0126 domain 8 80 3.5E-18 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AVL55_04520 f307a79ee137702fced5d2d48cf20288 314 Pfam PF04333 MlaA lipoprotein 50 240 1.0E-66 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AVL55_04520 f307a79ee137702fced5d2d48cf20288 314 PRINTS PR01805 VacJ lipoprotein signature 69 85 1.1E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AVL55_04520 f307a79ee137702fced5d2d48cf20288 314 PRINTS PR01805 VacJ lipoprotein signature 156 173 1.1E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AVL55_04520 f307a79ee137702fced5d2d48cf20288 314 PRINTS PR01805 VacJ lipoprotein signature 120 137 1.1E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AVL55_04520 f307a79ee137702fced5d2d48cf20288 314 PRINTS PR01805 VacJ lipoprotein signature 51 64 1.1E-22 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AVL55_05770 bee6e85b481c602a8fb5415e4fc6d080 384 Pfam PF13391 HNH endonuclease 25 92 3.1E-5 T 11-10-2018 IPR003615 HNH nuclease AVL55_08230 6450cf44baa3e54d44152f33c78cbcca 381 Gene3D G3DSA:3.40.50.2000 190 362 4.6E-36 T 11-10-2018 AVL55_08230 6450cf44baa3e54d44152f33c78cbcca 381 SUPERFAMILY SSF53756 12 379 2.06E-49 T 11-10-2018 AVL55_08230 6450cf44baa3e54d44152f33c78cbcca 381 Gene3D G3DSA:3.40.50.2000 24 372 4.6E-36 T 11-10-2018 AVL55_08230 6450cf44baa3e54d44152f33c78cbcca 381 Pfam PF00534 Glycosyl transferases group 1 201 357 5.7E-27 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AVL55_04650 e3d7cac9113d65368529dfe398144fac 100 Pfam PF11743 Protein of unknown function (DUF3301) 7 97 1.5E-27 T 11-10-2018 IPR021732 Protein of unknown function DUF3301 AVL55_18490 971564254147ad4985f6edc71212da04 525 Pfam PF03806 AbgT putative transporter family 15 523 4.4E-214 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AVL55_01010 2f88b8c9fe0d4e343e61494098445212 250 Pfam PF07510 Protein of unknown function (DUF1524) 129 213 2.9E-12 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 AVL55_11810 b6de6b8cb9935c81893619fcb97f7741 72 Pfam PF11160 Protein of unknown function (DUF2945) 9 60 2.1E-6 T 11-10-2018 IPR021331 Protein of unknown function DUF2945 AVL55_08970 f3c81dd0f6aec02aa65c261e2e06319b 268 Pfam PF11750 Protein of unknown function (DUF3307) 7 121 3.4E-27 T 11-10-2018 IPR021737 Bacteriophage phiKZ, Orf197 AVL55_19645 b33d73286ed5425840f7388f9f13233e 205 Pfam PF03458 UPF0126 domain 7 79 1.8E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AVL55_19645 b33d73286ed5425840f7388f9f13233e 205 Pfam PF03458 UPF0126 domain 93 163 2.6E-18 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AVL55_11590 ef7bfb4bb3b6b836584dd63bd4b256e2 264 Pfam PF09955 Predicted integral membrane protein (DUF2189) 78 191 2.5E-25 T 11-10-2018 IPR018692 Predicted integral membrane protein DUF2189 AVL55_18695 a5af6478842d5c684b0ec0de235a61bc 331 Pfam PF03601 Conserved hypothetical protein 698 11 312 5.3E-70 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AVL55_01255 4f1d13695248f2d59d4b80bf4b12f389 107 Pfam PF11666 Protein of unknown function (DUF2933) 18 68 7.7E-20 T 11-10-2018 IPR021682 Protein of unknown function DUF2933 AVL55_15550 d519f480dc7c252eacf07386b7580601 210 Gene3D G3DSA:2.60.120.260 15 174 1.0E-9 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AVL55_15285 d398a96b463450a411b607226ab579f8 274 SUPERFAMILY SSF56935 132 273 1.14E-8 T 11-10-2018 AVL55_03715 8d0d25e2ba78028c4985d0835e6b6d76 260 Pfam PF05742 Transport and Golgi organisation 2 1 245 2.4E-68 T 11-10-2018 IPR008551 Transport and Golgi organisation protein 2 AVL55_14155 c55279b1fa91ebc564288692b37535f8 557 SUPERFAMILY SSF56935 427 541 3.85E-5 T 11-10-2018 AVL55_06490 95362d46d972249193adee3b8ae19da6 289 Pfam PF11227 Protein of unknown function (DUF3025) 65 276 3.3E-70 T 11-10-2018 IPR021390 Protein of unknown function DUF3025 AVL55_12810 9f681201bf1cfb59d4c30c43cff921a1 241 Pfam PF07273 Protein of unknown function (DUF1439) 31 131 8.3E-6 T 11-10-2018 IPR010835 Protein of unknown function DUF1439 AVL55_00220 9cc49c21f5f2c66c6dc10b01b16dcdee 583 Pfam PF05960 Bacterial protein of unknown function (DUF885) 43 573 8.3E-166 T 11-10-2018 IPR010281 Protein of unknown function DUF885 AVL55_08150 54419ee3c0c14a87df7ff2a3559c1d87 468 Pfam PF04932 O-Antigen ligase 249 392 3.4E-19 T 11-10-2018 IPR007016 O-antigen ligase-related AVL55_19765 fac81b99419e39491aa743db322bca9e 196 Pfam PF09335 SNARE associated Golgi protein 53 159 2.9E-16 T 11-10-2018 IPR032816 SNARE associated Golgi protein AVL55_15650 f4a95c8a022aaf94299bb66e2aeacae7 278 Pfam PF11316 Putative rhamnosyl transferase 3 218 1.3E-50 T 11-10-2018 IPR021466 Putative rhamnosyl transferase AVL55_04825 aba0dc2dae8165f64641e48cfe937db0 143 Pfam PF05130 FlgN protein 5 133 3.1E-15 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AVL55_04825 aba0dc2dae8165f64641e48cfe937db0 143 SUPERFAMILY SSF140566 4 114 3.14E-12 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 AVL55_15870 30891fe01068630a74428a2107286211 417 Pfam PF03600 Citrate transporter 10 360 4.3E-23 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AVL55_17875 542dead5d7e357669b040b9460fab0b8 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 23 289 8.7E-100 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AVL55_17875 542dead5d7e357669b040b9460fab0b8 295 Gene3D G3DSA:3.20.20.220 2 295 7.9E-107 T 11-10-2018 AVL55_17875 542dead5d7e357669b040b9460fab0b8 295 Pfam PF02219 Methylenetetrahydrofolate reductase 19 290 1.6E-96 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AVL55_17875 542dead5d7e357669b040b9460fab0b8 295 SUPERFAMILY SSF51730 21 292 8.44E-93 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AVL55_04490 dc9ecd038a1f8453581982315c31576d 69 Pfam PF04995 Heme exporter protein D (CcmD) 13 54 2.9E-14 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AVL55_04490 dc9ecd038a1f8453581982315c31576d 69 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 54 1.1E-16 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AVL55_15320 fa0e56a70e7a6d25e787042c0fa4b4e8 361 SUPERFAMILY SSF53474 90 306 1.45E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_15320 fa0e56a70e7a6d25e787042c0fa4b4e8 361 Gene3D G3DSA:3.40.50.1820 79 318 4.7E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AVL55_15320 fa0e56a70e7a6d25e787042c0fa4b4e8 361 Pfam PF12146 Serine aminopeptidase, S33 92 221 7.4E-9 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AVL55_08785 f971a47debd7f995c5f1b241fc69391e 132 Pfam PF12514 Protein of unknown function (DUF3718) 34 101 4.9E-21 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 AVL55_06495 0951702058abd144258ade0413539b7d 234 Pfam PF04893 Yip1 domain 14 224 2.1E-19 T 11-10-2018 IPR006977 Yip1 domain GO:0016020 AVL55_04025 77d34d75bc52aa887766d6e689d110bc 423 Pfam PF01384 Phosphate transporter family 26 409 3.2E-111 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AVL55_08340 8fb3f976f6de3cd505ec2bb21a161406 131 Pfam PF11042 Protein of unknown function (DUF2750) 29 128 3.0E-19 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 AVL55_12060 c10b8df9e402dbdb516c58f146e066ea 108 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 62 1.0E-16 T 11-10-2018 AVL55_07200 14a5be58c3e515d56250bf3e5e84e650 324 SUPERFAMILY SSF143422 16 193 4.97E-19 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AVL55_07200 14a5be58c3e515d56250bf3e5e84e650 324 SMART SM01321 13 188 0.0016 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AVL55_13895 3af12086782eaaf9f303794aa3889862 226 Pfam PF04012 PspA/IM30 family 2 222 4.0E-37 T 11-10-2018 IPR007157 PspA/IM30 AVL55_12690 d54ed255d78109cb620a2868976b91cd 146 Pfam PF11158 Protein of unknown function (DUF2938) 1 139 1.2E-53 T 11-10-2018 IPR021329 Protein of unknown function DUF2938 AVL55_12200 c86b86544532d9c7c6b9a016af75671f 197 Pfam PF09347 Domain of unknown function (DUF1989) 4 168 4.5E-50 T 11-10-2018 IPR018959 Protein of unknown function DUF1989 AVL55_19580 8e227f86ad96c27faab4c39fd271d32b 405 Pfam PF02628 Cytochrome oxidase assembly protein 3 337 8.0E-84 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AVL55_13150 dfad873b5c809a9b4efae4b7712c0039 394 Pfam PF12679 ABC-2 family transporter protein 9 359 2.3E-19 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 AVL55_09145 690d560e0b55f98e5d397f523b008872 149 Pfam PF04217 Protein of unknown function, DUF412 6 144 5.9E-57 T 11-10-2018 IPR007334 Uncharacterised protein family UPF0208 AVL55_10755 6a17bd00d10ec387d8db47bb07be5a9e 159 Pfam PF05751 FixH 7 147 3.4E-39 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH AVL55_16110 e4b72a098ed64b306ceaba6c2bb99ef6 530 Pfam PF14224 Domain of unknown function (DUF4331) 27 525 5.1E-140 T 11-10-2018 IPR025566 Protein of unknown function DUF4331 AVL55_19055 9fb55c655c47ab4bbb38f117272ca903 264 Pfam PF10670 Domain of unknown function (DUF4198) 21 241 1.2E-39 T 11-10-2018 IPR019613 Protein of unknown function DUF4198 AVL55_11065 879d1f30ffc0fa09e975188bd7195175 177 Pfam PF13643 Domain of unknown function (DUF4145) 47 142 1.5E-17 T 11-10-2018 IPR025285 Domain of unknown function DUF4145 AVL55_13600 bfa9e0747d0fbe353f37373ee0ff1c2e 299 Pfam PF01758 Sodium Bile acid symporter family 12 196 8.0E-31 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AVL55_13600 bfa9e0747d0fbe353f37373ee0ff1c2e 299 Gene3D G3DSA:1.20.1530.20 2 289 6.0E-74 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AVL55_14115 8def4f45f367c9947636db83c7c2d57a 492 Pfam PF13440 Polysaccharide biosynthesis protein 31 318 1.1E-52 T 11-10-2018 AVL55_03450 dba394e29c032fffa99521a2938b979b 225 Pfam PF09335 SNARE associated Golgi protein 72 188 1.2E-17 T 11-10-2018 IPR032816 SNARE associated Golgi protein AVL55_18150 143f741901b462596792935a6e66e3b0 295 Pfam PF01963 TraB family 33 294 4.0E-68 T 11-10-2018 IPR002816 Pheromone shutdown, TraB AVL55_16510 b514a02fe32e6c19dcecd91e3d3b5c39 130 Pfam PF10627 Curli assembly protein CsgE 28 129 1.4E-24 T 11-10-2018 IPR018900 Curli assembly protein CsgE AVL55_05000 dde0e00b30335894f5bdffbd5ec6b6e6 1185 Pfam PF01973 Protein of unknown function DUF115 538 701 9.9E-30 T 11-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like AVL55_05825 d2c4732f30c6974827e778744208d829 387 SUPERFAMILY SSF56935 26 387 3.97E-33 T 11-10-2018 AVL55_00385 6f4a3d6d387efd881c93342602bb4b50 470 Pfam PF03553 Na+/H+ antiporter family 161 455 1.0E-45 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AVL55_00385 6f4a3d6d387efd881c93342602bb4b50 470 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 460 1.4E-123 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AVL55_01935 73030511b131a946719f7a6b65588a8f 192 Pfam PF05137 Fimbrial assembly protein (PilN) 101 176 9.8E-18 T 11-10-2018 IPR007813 Fimbrial assembly PilN AVL55_05590 b0f771677ee67945b81d0b7eb30b3568 307 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 13 262 4.8E-43 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AVL55_05695 92b8f313e2b68f9d6de7df2c3e03bc7a 729 SUPERFAMILY SSF56349 334 546 9.42E-5 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AVL55_10415 43c7b05676cf82c287a76ab5e572c310 389 Gene3D G3DSA:1.20.81.30 18 136 4.8E-7 T 11-10-2018 AVL55_13535 69613a93e25b7ccc01d0a3d72a70635b 187 Pfam PF14341 PilX N-terminal 6 53 3.7E-7 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain AVL55_10635 ab71de0c804077ca068e82090a7aee5b 205 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1 52 2.7E-13 T 11-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 AVL55_10635 ab71de0c804077ca068e82090a7aee5b 205 Gene3D G3DSA:2.180.10.10 1 52 1.2E-12 T 11-10-2018 AVL55_01780 4e0d1586817d4dd1600a0054ad22928d 384 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 4.5E-5 T 11-10-2018 AVL55_01780 4e0d1586817d4dd1600a0054ad22928d 384 PRINTS PR00173 Glutamate-aspartate symporter signature 191 210 4.5E-5 T 11-10-2018 AVL55_01780 4e0d1586817d4dd1600a0054ad22928d 384 PRINTS PR00173 Glutamate-aspartate symporter signature 294 313 4.5E-5 T 11-10-2018 AVL55_01780 4e0d1586817d4dd1600a0054ad22928d 384 PRINTS PR00173 Glutamate-aspartate symporter signature 51 76 4.5E-5 T 11-10-2018 AVL55_01780 4e0d1586817d4dd1600a0054ad22928d 384 Pfam PF02690 Na+/Pi-cotransporter 33 149 1.9E-20 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AVL55_01780 4e0d1586817d4dd1600a0054ad22928d 384 Pfam PF02690 Na+/Pi-cotransporter 218 336 4.2E-19 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AVL55_11310 54775c8a0fc7a12cf01e8ed3df964a05 244 Pfam PF11306 Protein of unknown function (DUF3108) 14 231 8.6E-17 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 AVL55_16105 a81c9d4218512639a8f1200ddbb734d0 245 Pfam PF10099 Anti-sigma-K factor rskA 62 237 2.7E-20 T 11-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 AVL55_19015 ac7ed43de4b7c2d0a960edadb41c4036 93 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 90 9.3E-33 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AVL55_18120 3b2ff2c067853354c2e4270ff35350c8 258 Pfam PF11932 Protein of unknown function (DUF3450) 12 250 1.5E-26 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AVL55_02350 1db2c426fc0b60856e4d1d174efa08c0 241 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 188 4.9E-33 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT AVL55_11415 ad2ab95aea834d8949c70b89fe67bf92 403 Pfam PF03773 Predicted permease 8 317 1.7E-55 T 11-10-2018 IPR005524 Predicted permease DUF318 AVL55_02775 496093ee6ace065a85e23ce290d0e525 465 SUPERFAMILY SSF55486 215 395 1.47E-5 T 11-10-2018 AVL55_02870 562e21752e9186bd08c7c0e59303f299 110 Pfam PF07445 Primosomal replication protein priC 12 94 3.3E-5 T 11-10-2018 IPR010890 Primosomal replication PriB/PriC AVL55_12735 8200916a2be15aadc32b8c971979470c 435 Pfam PF02667 Short chain fatty acid transporter 1 435 2.5E-151 T 11-10-2018 IPR006160 Short chain fatty acid transporter AtoE AVL55_18750 f817f1f62b041380f1d21652a0b4a74e 260 Pfam PF01925 Sulfite exporter TauE/SafE 23 247 2.9E-16 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AVL55_05765 a7407c75b99afb0c61e6d0f58f1fb61b 122 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 4 118 2.1E-12 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AVL55_17460 23a547d951eecf7aab7029f68bf1acf7 413 Pfam PF13704 Glycosyl transferase family 2 29 125 1.0E-10 T 11-10-2018 AVL55_10770 765b7035ac31d68b118065cd3904fb5a 219 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 212 1.3E-51 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain AVL55_12540 fb9eebc2b7099c072f5372e71c00f64b 199 Pfam PF06930 Protein of unknown function (DUF1282) 9 180 2.3E-37 T 11-10-2018 IPR009698 Protein of unknown function DUF1282 AVL55_18595 49cca0154cf9d94f566e084dad5a370d 333 Pfam PF13349 Putative adhesin 54 270 6.4E-8 T 11-10-2018 IPR025164 Putative adhesin AVL55_03415 e56151987750cb0390f76d6884230923 215 Gene3D G3DSA:1.25.40.10 22 194 3.7E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_03415 e56151987750cb0390f76d6884230923 215 SUPERFAMILY SSF48452 59 179 3.72E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AVL55_04300 8a36bdc256a524ced3577fc2b4eb4adb 269 TIGRFAM TIGR04052 AZL_007920_fam: AZL_007920/MXAN_0976 family protein 65 260 1.6E-43 T 11-10-2018 IPR023977 Conserved hypotheical protein CHP04052 AVL55_06100 0ebfc1474557470ea8517d580de9b773 1189 Pfam PF07916 TraG-like protein, N-terminal region 3 456 4.7E-105 T 11-10-2018 IPR012931 TraG-like, N-terminal AVL55_07720 608f621cc3c8651db2fb505fa51f90cf 377 Pfam PF01882 Protein of unknown function DUF58 248 294 1.5E-4 T 11-10-2018 IPR002881 Domain of unknown function DUF58 AVL55_16850 69828303f35269ff485bc6a1b7d0fbac 276 Pfam PF11101 Protein of unknown function (DUF2884) 32 260 1.4E-64 T 11-10-2018 IPR021307 Protein of unknown function DUF2884 AVL55_18065 7445475503684b1595511ee8e9ac4de7 277 Pfam PF10670 Domain of unknown function (DUF4198) 23 254 1.2E-61 T 11-10-2018 IPR019613 Protein of unknown function DUF4198 AVL55_14510 d9833ce59f946041a2ffd1278e24df85 171 Pfam PF06127 Protein of unknown function (DUF962) 1 152 2.8E-24 T 11-10-2018 IPR009305 Protein of unknown function DUF962 AVL55_12755 353a9d9d93278787d23d43933ad37b02 97 Pfam PF08891 YfcL protein 16 95 1.5E-27 T 11-10-2018 IPR014987 Uncharacterised protein family YfcL AVL55_19035 ae4400ee9e23634f8bbdac62137e2f43 247 Pfam PF07277 SapC 7 227 4.6E-68 T 11-10-2018 IPR010836 SapC AVL55_16980 7470e5328b7c11832ac7119d05c97bb2 301 Pfam PF04116 Fatty acid hydroxylase superfamily 82 231 7.8E-24 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114