locus-tag class description AMBAS45_00005 PF11638 DnaA N-terminal domain AMBAS45_00005 PF08299 Bacterial dnaA protein helix-turn-helix AMBAS45_00005 PF00308 Bacterial dnaA protein AMBAS45_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AMBAS45_00010 PF02767 DNA polymerase III beta subunit, central domain AMBAS45_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AMBAS45_00015 PF02463 RecF/RecN/SMC N terminal domain AMBAS45_00020 PF00204 DNA gyrase B AMBAS45_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AMBAS45_00020 PF01751 Toprim domain AMBAS45_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_00020 PF18053 DNA gyrase B subunit insert domain AMBAS45_00035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMBAS45_00045 PF02092 Glycyl-tRNA synthetase beta subunit AMBAS45_00045 PF05746 DALR anticodon binding domain AMBAS45_00050 PF02091 Glycyl-tRNA synthetase alpha subunit AMBAS45_00055 PF03352 Methyladenine glycosylase AMBAS45_00065 PF04220 Der GTPase activator (YihI) AMBAS45_00075 PF00034 Cytochrome c AMBAS45_00080 PF01926 50S ribosome-binding GTPase AMBAS45_00085 PF01612 3'-5' exonuclease AMBAS45_00085 PF00476 DNA polymerase family A AMBAS45_00085 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMBAS45_00085 PF01367 5'-3' exonuclease, C-terminal SAM fold AMBAS45_00095 PF02386 Cation transport protein AMBAS45_00100 PF02254 TrkA-N domain AMBAS45_00100 PF02080 TrkA-C domain AMBAS45_00105 PF01189 16S rRNA methyltransferase RsmB/F AMBAS45_00105 PF01029 NusB family AMBAS45_00110 PF02911 Formyl transferase, C-terminal domain AMBAS45_00110 PF00551 Formyl transferase AMBAS45_00115 PF01327 Polypeptide deformylase AMBAS45_00125 PF17782 DprA winged helix domain AMBAS45_00125 PF02481 DNA recombination-mediator protein A AMBAS45_00130 PF04361 Protein of unknown function (DUF494) AMBAS45_00140 PF01300 Telomere recombination AMBAS45_00145 PF01218 Coproporphyrinogen III oxidase AMBAS45_00150 PF03922 OmpW family AMBAS45_00160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMBAS45_00160 PF01488 Shikimate / quinate 5-dehydrogenase AMBAS45_00160 PF08501 Shikimate dehydrogenase substrate binding domain AMBAS45_00165 PF00132 Bacterial transferase hexapeptide (six repeats) AMBAS45_00190 PF02811 PHP domain AMBAS45_00190 PF01336 OB-fold nucleic acid binding domain AMBAS45_00190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMBAS45_00190 PF14579 Helix-hairpin-helix motif AMBAS45_00190 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMBAS45_00220 PF02225 PA domain AMBAS45_00220 PF04389 Peptidase family M28 AMBAS45_00225 PF00440 Bacterial regulatory proteins, tetR family AMBAS45_00230 PF04127 DNA / pantothenate metabolism flavoprotein AMBAS45_00230 PF02441 Flavoprotein AMBAS45_00235 PF04002 RadC-like JAB domain AMBAS45_00255 PF06082 Exopolysaccharide biosynthesis protein YbjH AMBAS45_00260 PF00830 Ribosomal L28 family AMBAS45_00265 PF00471 Ribosomal protein L33 AMBAS45_00275 PF06827 Zinc finger found in FPG and IleRS AMBAS45_00275 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMBAS45_00275 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBAS45_00280 PF01467 Cytidylyltransferase-like AMBAS45_00300 PF00563 EAL domain AMBAS45_00300 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_00300 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_00305 PF00155 Aminotransferase class I and II AMBAS45_00310 PF00107 Zinc-binding dehydrogenase AMBAS45_00310 PF08240 Alcohol dehydrogenase GroES-like domain AMBAS45_00315 PF00581 Rhodanese-like domain AMBAS45_00320 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AMBAS45_00320 PF01694 Rhomboid family AMBAS45_00330 PF04345 Chorismate lyase AMBAS45_00335 PF01040 UbiA prenyltransferase family AMBAS45_00340 PF04380 Membrane fusogenic activity AMBAS45_00345 PF13361 UvrD-like helicase C-terminal domain AMBAS45_00345 PF00580 UvrD/REP helicase N-terminal domain AMBAS45_00350 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_00350 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_00350 PF00563 EAL domain AMBAS45_00355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMBAS45_00370 PF04143 Sulphur transport AMBAS45_00375 PF02082 Transcriptional regulator AMBAS45_00380 PF01925 Sulfite exporter TauE/SafE AMBAS45_00385 PF00753 Metallo-beta-lactamase superfamily AMBAS45_00395 PF02028 BCCT, betaine/carnitine/choline family transporter AMBAS45_00445 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_00445 PF00593 TonB dependent receptor AMBAS45_00455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_00455 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_00455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_00460 PF03466 LysR substrate binding domain AMBAS45_00465 PF00753 Metallo-beta-lactamase superfamily AMBAS45_00470 PF04317 YcjX-like family, DUF463 AMBAS45_00485 PF04055 Radical SAM superfamily AMBAS45_00485 PF06968 Biotin and Thiamin Synthesis associated domain AMBAS45_00490 PF05690 Thiazole biosynthesis protein ThiG AMBAS45_00500 PF00899 ThiF family AMBAS45_00505 PF02581 Thiamine monophosphate synthase AMBAS45_00510 PF01964 Radical SAM ThiC family AMBAS45_00510 PF13667 ThiC-associated domain AMBAS45_00515 PF07719 Tetratricopeptide repeat AMBAS45_00515 PF07219 HemY protein N-terminus AMBAS45_00520 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AMBAS45_00525 PF02602 Uroporphyrinogen-III synthase HemD AMBAS45_00530 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMBAS45_00530 PF03900 Porphobilinogen deaminase, C-terminal domain AMBAS45_00535 PF00072 Response regulator receiver domain AMBAS45_00535 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_00545 PF00625 Guanylate kinase AMBAS45_00550 PF01192 RNA polymerase Rpb6 AMBAS45_00555 PF04607 Region found in RelA / SpoT proteins AMBAS45_00555 PF13291 ACT domain AMBAS45_00555 PF02824 TGS domain AMBAS45_00560 PF01042 Endoribonuclease L-PSP AMBAS45_00565 PF00588 SpoU rRNA Methylase family AMBAS45_00565 PF12105 SpoU, rRNA methylase, C-terminal AMBAS45_00570 PF00270 DEAD/DEAH box helicase AMBAS45_00570 PF00271 Helicase conserved C-terminal domain AMBAS45_00570 PF17191 RecG wedge domain AMBAS45_00575 PF04445 Putative SAM-dependent methyltransferase AMBAS45_00580 PF08534 Redoxin AMBAS45_00595 PF00528 Binding-protein-dependent transport system inner membrane component AMBAS45_00600 PF00005 ABC transporter AMBAS45_00600 PF08402 TOBE domain AMBAS45_00610 PF03922 OmpW family AMBAS45_00625 PF04940 Sensors of blue-light using FAD AMBAS45_00625 PF00563 EAL domain AMBAS45_00630 PF13426 PAS domain AMBAS45_00630 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_00630 PF00563 EAL domain AMBAS45_00635 PF03466 LysR substrate binding domain AMBAS45_00635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_00640 PF01810 LysE type translocator AMBAS45_00645 PF00893 Small Multidrug Resistance protein AMBAS45_00665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_00665 PF00529 HlyD membrane-fusion protein of T1SS AMBAS45_00670 PF00873 AcrB/AcrD/AcrF family AMBAS45_00680 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AMBAS45_00680 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AMBAS45_00685 PF00850 Histone deacetylase domain AMBAS45_00690 PF00462 Glutaredoxin AMBAS45_00700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_00700 PF00672 HAMP domain AMBAS45_00700 PF12729 Four helix bundle sensory module for signal transduction AMBAS45_00710 PF11737 Protein of unknown function (DUF3300) AMBAS45_00715 PF00925 GTP cyclohydrolase II AMBAS45_00720 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_00720 PF00563 EAL domain AMBAS45_00720 PF08448 PAS fold AMBAS45_00735 PF09382 RQC domain AMBAS45_00735 PF00270 DEAD/DEAH box helicase AMBAS45_00735 PF00271 Helicase conserved C-terminal domain AMBAS45_00735 PF00570 HRDC domain AMBAS45_00735 PF16124 RecQ zinc-binding AMBAS45_00740 PF03061 Thioesterase superfamily AMBAS45_00745 PF01769 Divalent cation transporter AMBAS45_00745 PF03448 MgtE intracellular N domain AMBAS45_00745 PF00571 CBS domain AMBAS45_00750 PF00892 EamA-like transporter family AMBAS45_00755 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_00755 PF08448 PAS fold AMBAS45_00760 PF00580 UvrD/REP helicase N-terminal domain AMBAS45_00760 PF13361 UvrD-like helicase C-terminal domain AMBAS45_00765 PF00132 Bacterial transferase hexapeptide (six repeats) AMBAS45_00765 PF06426 Serine acetyltransferase, N-terminal AMBAS45_00770 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_00775 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_00790 PF01678 Diaminopimelate epimerase AMBAS45_00795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMBAS45_00795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMBAS45_00810 PF01569 PAP2 superfamily AMBAS45_00815 PF03737 Aldolase/RraA AMBAS45_00825 PF02441 Flavoprotein AMBAS45_00830 PF02875 Mur ligase family, glutamate ligase domain AMBAS45_00830 PF01225 Mur ligase family, catalytic domain AMBAS45_00830 PF08245 Mur ligase middle domain AMBAS45_00835 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMBAS45_00840 PF00719 Inorganic pyrophosphatase AMBAS45_00885 PF00005 ABC transporter AMBAS45_00885 PF17760 UvrA interaction domain AMBAS45_00885 PF17755 UvrA DNA-binding domain AMBAS45_00890 PF07690 Major Facilitator Superfamily AMBAS45_00895 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_00915 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_00920 PF01263 Aldose 1-epimerase AMBAS45_00925 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AMBAS45_00925 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AMBAS45_00930 PF00288 GHMP kinases N terminal domain AMBAS45_00930 PF08544 GHMP kinases C terminal AMBAS45_00930 PF10509 Galactokinase galactose-binding signature AMBAS45_00935 PF00474 Sodium:solute symporter family AMBAS45_00940 PF00436 Single-strand binding protein family AMBAS45_00960 PF16875 Glycosyl hydrolase family 36 N-terminal domain AMBAS45_00960 PF16874 Glycosyl hydrolase family 36 C-terminal domain AMBAS45_00965 PF00474 Sodium:solute symporter family AMBAS45_00975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMBAS45_00975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMBAS45_00980 PF08220 DeoR-like helix-turn-helix domain AMBAS45_00980 PF00455 DeoR C terminal sensor domain AMBAS45_00985 PF01266 FAD dependent oxidoreductase AMBAS45_00985 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMBAS45_01020 PF00263 Bacterial type II and III secretion system protein AMBAS45_01020 PF03958 Bacterial type II/III secretion system short domain AMBAS45_01025 PF01471 Putative peptidoglycan binding domain AMBAS45_01025 PF13401 AAA domain AMBAS45_01035 PF00437 Type II/IV secretion system protein AMBAS45_01040 PF00482 Type II secretion system (T2SS), protein F AMBAS45_01050 PF00114 Pilin (bacterial filament) AMBAS45_01050 PF07963 Prokaryotic N-terminal methylation motif AMBAS45_01055 PF00114 Pilin (bacterial filament) AMBAS45_01055 PF07963 Prokaryotic N-terminal methylation motif AMBAS45_01095 PF04085 rod shape-determining protein MreC AMBAS45_01100 PF04093 rod shape-determining protein MreD AMBAS45_01105 PF02545 Maf-like protein AMBAS45_01110 PF10150 Ribonuclease E/G family AMBAS45_01110 PF00575 S1 RNA binding domain AMBAS45_01120 PF00795 Carbon-nitrogen hydrolase AMBAS45_01125 PF01523 Putative modulator of DNA gyrase AMBAS45_01135 PF04751 Protein of unknown function (DUF615) AMBAS45_01140 PF01523 Putative modulator of DNA gyrase AMBAS45_01150 PF02929 Beta galactosidase small chain AMBAS45_01150 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMBAS45_01150 PF16353 Domain of unknown function(DUF4981) AMBAS45_01150 PF00703 Glycosyl hydrolases family 2 AMBAS45_01150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMBAS45_01155 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_01155 PF00072 Response regulator receiver domain AMBAS45_01160 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBAS45_01160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_01160 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_01165 PF00534 Glycosyl transferases group 1 AMBAS45_01165 PF08323 Starch synthase catalytic domain AMBAS45_01170 PF08468 Methyltransferase small domain N-terminal AMBAS45_01170 PF05175 Methyltransferase small domain AMBAS45_01175 PF02390 Putative methyltransferase AMBAS45_01185 PF00730 HhH-GPD superfamily base excision DNA repair protein AMBAS45_01185 PF14815 NUDIX domain AMBAS45_01185 PF00633 Helix-hairpin-helix motif AMBAS45_01185 PF10576 Iron-sulfur binding domain of endonuclease III AMBAS45_01190 PF04362 Bacterial Fe(2+) trafficking AMBAS45_01240 PF00529 HlyD membrane-fusion protein of T1SS AMBAS45_01240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_01245 PF00873 AcrB/AcrD/AcrF family AMBAS45_01250 PF16916 Dimerisation domain of Zinc Transporter AMBAS45_01250 PF01545 Cation efflux family AMBAS45_01260 PF01219 Prokaryotic diacylglycerol kinase AMBAS45_01265 PF00884 Sulfatase AMBAS45_01265 PF08019 Phosphoethanolamine transferase EptA/EptB AMBAS45_01270 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AMBAS45_01280 PF00535 Glycosyl transferase family 2 AMBAS45_01285 PF00072 Response regulator receiver domain AMBAS45_01285 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_01290 PF00672 HAMP domain AMBAS45_01290 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_01320 PF00551 Formyl transferase AMBAS45_01320 PF02911 Formyl transferase, C-terminal domain AMBAS45_01330 PF09278 MerR, DNA binding AMBAS45_01330 PF00376 MerR family regulatory protein AMBAS45_01335 PF00403 Heavy-metal-associated domain AMBAS45_01375 PF13520 Amino acid permease AMBAS45_01385 PF07732 Multicopper oxidase AMBAS45_01385 PF07731 Multicopper oxidase AMBAS45_01385 PF00394 Multicopper oxidase AMBAS45_01420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_01420 PF00672 HAMP domain AMBAS45_01420 PF17200 Single Cache domain 2 AMBAS45_01425 PF00072 Response regulator receiver domain AMBAS45_01430 PF02895 Signal transducing histidine kinase, homodimeric domain AMBAS45_01430 PF09078 CheY binding AMBAS45_01430 PF01584 CheW-like domain AMBAS45_01430 PF01627 Hpt domain AMBAS45_01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_01435 PF01584 CheW-like domain AMBAS45_01440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_01440 PF13426 PAS domain AMBAS45_01440 PF08447 PAS fold AMBAS45_01445 PF03705 CheR methyltransferase, all-alpha domain AMBAS45_01445 PF01739 CheR methyltransferase, SAM binding domain AMBAS45_01450 PF03975 CheD chemotactic sensory transduction AMBAS45_01455 PF00072 Response regulator receiver domain AMBAS45_01455 PF01339 CheB methylesterase AMBAS45_01460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_01460 PF17200 Single Cache domain 2 AMBAS45_01460 PF00672 HAMP domain AMBAS45_01465 PF00072 Response regulator receiver domain AMBAS45_01470 PF02895 Signal transducing histidine kinase, homodimeric domain AMBAS45_01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_01470 PF01627 Hpt domain AMBAS45_01470 PF09078 CheY binding AMBAS45_01470 PF01584 CheW-like domain AMBAS45_01475 PF01584 CheW-like domain AMBAS45_01480 PF13426 PAS domain AMBAS45_01480 PF08447 PAS fold AMBAS45_01480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_01485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_01485 PF08447 PAS fold AMBAS45_01485 PF13426 PAS domain AMBAS45_01490 PF03705 CheR methyltransferase, all-alpha domain AMBAS45_01490 PF01739 CheR methyltransferase, SAM binding domain AMBAS45_01495 PF03975 CheD chemotactic sensory transduction AMBAS45_01500 PF01339 CheB methylesterase AMBAS45_01500 PF00072 Response regulator receiver domain AMBAS45_01510 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_01520 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_01520 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AMBAS45_01530 PF01204 Trehalase AMBAS45_01545 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_01555 PF00072 Response regulator receiver domain AMBAS45_01555 PF09308 LuxQ, periplasmic AMBAS45_01555 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_01570 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_01575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMBAS45_01575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMBAS45_01585 PF03825 Nucleoside H+ symporter AMBAS45_01595 PF00732 GMC oxidoreductase AMBAS45_01595 PF05199 GMC oxidoreductase AMBAS45_01610 PF00465 Iron-containing alcohol dehydrogenase AMBAS45_01615 PF01063 Amino-transferase class IV AMBAS45_01620 PF00300 Histidine phosphatase superfamily (branch 1) AMBAS45_01630 PF00330 Aconitase family (aconitate hydratase) AMBAS45_01630 PF00694 Aconitase C-terminal domain AMBAS45_01640 PF00437 Type II/IV secretion system protein AMBAS45_01645 PF00338 Ribosomal protein S10p/S20e AMBAS45_01650 PF00297 Ribosomal protein L3 AMBAS45_01655 PF00573 Ribosomal protein L4/L1 family AMBAS45_01660 PF00276 Ribosomal protein L23 AMBAS45_01665 PF00181 Ribosomal Proteins L2, RNA binding domain AMBAS45_01665 PF03947 Ribosomal Proteins L2, C-terminal domain AMBAS45_01670 PF00203 Ribosomal protein S19 AMBAS45_01675 PF00237 Ribosomal protein L22p/L17e AMBAS45_01680 PF00189 Ribosomal protein S3, C-terminal domain AMBAS45_01680 PF07650 KH domain AMBAS45_01685 PF00252 Ribosomal protein L16p/L10e AMBAS45_01690 PF00831 Ribosomal L29 protein AMBAS45_01695 PF00366 Ribosomal protein S17 AMBAS45_01705 PF00534 Glycosyl transferases group 1 AMBAS45_01705 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMBAS45_01725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_01725 PF00672 HAMP domain AMBAS45_01725 PF02743 Cache domain AMBAS45_01730 PF01432 Peptidase family M3 AMBAS45_01750 PF00551 Formyl transferase AMBAS45_01750 PF01842 ACT domain AMBAS45_01760 PF08482 ATP-dependent helicase C-terminal AMBAS45_01760 PF00271 Helicase conserved C-terminal domain AMBAS45_01760 PF00270 DEAD/DEAH box helicase AMBAS45_01760 PF04408 Helicase associated domain (HA2) AMBAS45_01770 PF13406 Transglycosylase SLT domain AMBAS45_01775 PF00912 Transglycosylase AMBAS45_01775 PF00905 Penicillin binding protein transpeptidase domain AMBAS45_01775 PF14814 Bifunctional transglycosylase second domain AMBAS45_01790 PF05661 Protein of unknown function (DUF808) AMBAS45_01800 PF12833 Helix-turn-helix domain AMBAS45_01810 PF00543 Nitrogen regulatory protein P-II AMBAS45_01815 PF00909 Ammonium Transporter Family AMBAS45_01825 PF04261 Dyp-type peroxidase family AMBAS45_01840 PF00202 Aminotransferase class-III AMBAS45_01845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMBAS45_01845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMBAS45_01860 PF00873 AcrB/AcrD/AcrF family AMBAS45_01870 PF01627 Hpt domain AMBAS45_01870 PF00072 Response regulator receiver domain AMBAS45_01870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBAS45_01870 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_01870 PF00672 HAMP domain AMBAS45_01870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_01875 PF00521 DNA gyrase/topoisomerase IV, subunit A AMBAS45_01875 PF03989 DNA gyrase C-terminal domain, beta-propeller AMBAS45_01885 PF13188 PAS domain AMBAS45_01885 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_01885 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_01885 PF00563 EAL domain AMBAS45_01895 PF00171 Aldehyde dehydrogenase family AMBAS45_01900 PF04958 Arginine N-succinyltransferase beta subunit AMBAS45_01905 PF00202 Aminotransferase class-III AMBAS45_01915 PF00117 Glutamine amidotransferase class-I AMBAS45_01920 PF00579 tRNA synthetases class I (W and Y) AMBAS45_01925 PF00834 Ribulose-phosphate 3 epimerase family AMBAS45_01945 PF02086 D12 class N6 adenine-specific DNA methyltransferase AMBAS45_01955 PF01761 3-dehydroquinate synthase AMBAS45_01960 PF01202 Shikimate kinase AMBAS45_01965 PF07660 Secretin and TonB N terminus short domain AMBAS45_01965 PF11741 AMIN domain AMBAS45_01965 PF00263 Bacterial type II and III secretion system protein AMBAS45_01965 PF03958 Bacterial type II/III secretion system short domain AMBAS45_01990 PF00905 Penicillin binding protein transpeptidase domain AMBAS45_01990 PF00912 Transglycosylase AMBAS45_01990 PF17092 Penicillin-binding protein OB-like domain AMBAS45_01995 PF03949 Malic enzyme, NAD binding domain AMBAS45_01995 PF00390 Malic enzyme, N-terminal domain AMBAS45_02005 PF02798 Glutathione S-transferase, N-terminal domain AMBAS45_02015 PF00199 Catalase AMBAS45_02015 PF06628 Catalase-related immune-responsive AMBAS45_02055 PF00583 Acetyltransferase (GNAT) family AMBAS45_02055 PF00696 Amino acid kinase family AMBAS45_02060 PF00206 Lyase AMBAS45_02060 PF14698 Argininosuccinate lyase C-terminal AMBAS45_02065 PF00764 Arginosuccinate synthase AMBAS45_02070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMBAS45_02070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMBAS45_02075 PF00696 Amino acid kinase family AMBAS45_02080 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMBAS45_02080 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMBAS45_02085 PF02142 MGS-like domain AMBAS45_02095 PF02107 Flagellar L-ring protein AMBAS45_02110 PF00072 Response regulator receiver domain AMBAS45_02110 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_02115 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_02115 PF00672 HAMP domain AMBAS45_02115 PF16527 Two-component sensor protein CpxA, periplasmic domain AMBAS45_02120 PF12146 Serine aminopeptidase, S33 AMBAS45_02125 PF00588 SpoU rRNA Methylase family AMBAS45_02130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_02135 PF12704 MacB-like periplasmic core domain AMBAS45_02135 PF02687 FtsX-like permease family AMBAS45_02135 PF00005 ABC transporter AMBAS45_02140 PF02321 Outer membrane efflux protein AMBAS45_02150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMBAS45_02150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMBAS45_02155 PF02556 Preprotein translocase subunit SecB AMBAS45_02160 PF00462 Glutaredoxin AMBAS45_02165 PF00581 Rhodanese-like domain AMBAS45_02170 PF01551 Peptidase family M23 AMBAS45_02175 PF04748 Divergent polysaccharide deacetylase AMBAS45_02185 PF03009 Glycerophosphoryl diester phosphodiesterase family AMBAS45_02195 PF02666 Phosphatidylserine decarboxylase AMBAS45_02200 PF03193 RsgA GTPase AMBAS45_02205 PF00929 Exonuclease AMBAS45_02210 PF00593 TonB dependent receptor AMBAS45_02210 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_02215 PF13181 Tetratricopeptide repeat AMBAS45_02230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMBAS45_02230 PF00205 Thiamine pyrophosphate enzyme, central domain AMBAS45_02230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMBAS45_02235 PF10369 Small subunit of acetolactate synthase AMBAS45_02240 PF01979 Amidohydrolase family AMBAS45_02245 PF03606 C4-dicarboxylate anaerobic carrier AMBAS45_02250 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_02250 PF00593 TonB dependent receptor AMBAS45_02255 PF03575 Peptidase family S51 AMBAS45_02265 PF02416 mttA/Hcf106 family AMBAS45_02270 PF02416 mttA/Hcf106 family AMBAS45_02275 PF00902 Sec-independent protein translocase protein (TatC) AMBAS45_02285 PF01026 TatD related DNase AMBAS45_02290 PF00360 Phytochrome region AMBAS45_02290 PF00563 EAL domain AMBAS45_02290 PF01590 GAF domain AMBAS45_02290 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_02295 PF00490 Delta-aminolevulinic acid dehydratase AMBAS45_02300 PF02541 Ppx/GppA phosphatase family AMBAS45_02305 PF00270 DEAD/DEAH box helicase AMBAS45_02305 PF00271 Helicase conserved C-terminal domain AMBAS45_02310 PF00085 Thioredoxin AMBAS45_02315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMBAS45_02315 PF07497 Rho termination factor, RNA-binding domain AMBAS45_02315 PF07498 Rho termination factor, N-terminal domain AMBAS45_02325 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_02325 PF09308 LuxQ, periplasmic AMBAS45_02325 PF00072 Response regulator receiver domain AMBAS45_02330 PF06965 Na+/H+ antiporter 1 AMBAS45_02335 PF00731 AIR carboxylase AMBAS45_02340 PF02222 ATP-grasp domain AMBAS45_02340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMBAS45_02350 PF00210 Ferritin-like domain AMBAS45_02355 PF07995 Glucose / Sorbosone dehydrogenase AMBAS45_02360 PF00326 Prolyl oligopeptidase family AMBAS45_02360 PF07676 WD40-like Beta Propeller Repeat AMBAS45_02370 PF00085 Thioredoxin AMBAS45_02385 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AMBAS45_02390 PF01548 Transposase AMBAS45_02390 PF02371 Transposase IS116/IS110/IS902 family AMBAS45_02395 PF00709 Adenylosuccinate synthetase AMBAS45_02400 PF00171 Aldehyde dehydrogenase family AMBAS45_02425 PF03553 Na+/H+ antiporter family AMBAS45_02430 PF00933 Glycosyl hydrolase family 3 N terminal domain AMBAS45_02440 PF07075 Protein of unknown function (DUF1343) AMBAS45_02445 PF01380 SIS domain AMBAS45_02450 PF00842 Alanine racemase, C-terminal domain AMBAS45_02450 PF01168 Alanine racemase, N-terminal domain AMBAS45_02465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBAS45_02500 PF00464 Serine hydroxymethyltransferase AMBAS45_02505 PF03466 LysR substrate binding domain AMBAS45_02505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_02510 PF03831 PhnA domain AMBAS45_02510 PF08274 PhnA Zinc-Ribbon AMBAS45_02515 PF00583 Acetyltransferase (GNAT) family AMBAS45_02525 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMBAS45_02545 PF09234 Domain of unknown function (DUF1963) AMBAS45_02570 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AMBAS45_02595 PF13495 Phage integrase, N-terminal SAM-like domain AMBAS45_02595 PF00589 Phage integrase family AMBAS45_02600 PF00108 Thiolase, N-terminal domain AMBAS45_02600 PF02803 Thiolase, C-terminal domain AMBAS45_02605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMBAS45_02605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMBAS45_02605 PF00378 Enoyl-CoA hydratase/isomerase AMBAS45_02610 PF01551 Peptidase family M23 AMBAS45_02610 PF10145 Phage-related minor tail protein AMBAS45_02610 PF01464 Transglycosylase SLT domain AMBAS45_02615 PF00557 Metallopeptidase family M24 AMBAS45_02625 PF00348 Polyprenyl synthetase AMBAS45_02630 PF00829 Ribosomal prokaryotic L21 protein AMBAS45_02635 PF01016 Ribosomal L27 protein AMBAS45_02640 PF01926 50S ribosome-binding GTPase AMBAS45_02640 PF01018 GTP1/OBG AMBAS45_02650 PF09055 Nickel-containing superoxide dismutase AMBAS45_02665 PF00186 Dihydrofolate reductase AMBAS45_02670 PF00140 Sigma-70 factor, region 1.2 AMBAS45_02670 PF04542 Sigma-70 region 2 AMBAS45_02670 PF04539 Sigma-70 region 3 AMBAS45_02670 PF04545 Sigma-70, region 4 AMBAS45_02675 PF01476 LysM domain AMBAS45_02675 PF01551 Peptidase family M23 AMBAS45_02680 PF09335 SNARE associated Golgi protein AMBAS45_02690 PF01142 tRNA pseudouridine synthase D (TruD) AMBAS45_02695 PF02542 YgbB family AMBAS45_02700 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMBAS45_02705 PF04977 Septum formation initiator AMBAS45_02715 PF17200 Single Cache domain 2 AMBAS45_02715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_02715 PF00672 HAMP domain AMBAS45_02725 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMBAS45_02725 PF14850 DNA-binding domain of Proline dehydrogenase AMBAS45_02725 PF00171 Aldehyde dehydrogenase family AMBAS45_02725 PF01619 Proline dehydrogenase AMBAS45_02730 PF02321 Outer membrane efflux protein AMBAS45_02740 PF00873 AcrB/AcrD/AcrF family AMBAS45_02745 PF00072 Response regulator receiver domain AMBAS45_02745 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_02750 PF18719 ArlS sensor domain AMBAS45_02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_02750 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_02770 PF02976 DNA mismatch repair enzyme MutH AMBAS45_02775 PF00293 NUDIX domain AMBAS45_02780 PF02896 PEP-utilising enzyme, TIM barrel domain AMBAS45_02780 PF00391 PEP-utilising enzyme, mobile domain AMBAS45_02780 PF05524 PEP-utilising enzyme, N-terminal AMBAS45_02780 PF01590 GAF domain AMBAS45_02785 PF01925 Sulfite exporter TauE/SafE AMBAS45_02790 PF01790 Prolipoprotein diacylglyceryl transferase AMBAS45_02795 PF00303 Thymidylate synthase AMBAS45_02800 PF00072 Response regulator receiver domain AMBAS45_02805 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_02805 PF05230 MASE2 domain AMBAS45_02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_02810 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_02810 PF01627 Hpt domain AMBAS45_02810 PF00672 HAMP domain AMBAS45_02810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBAS45_02810 PF00072 Response regulator receiver domain AMBAS45_02815 PF07690 Major Facilitator Superfamily AMBAS45_02830 PF00849 RNA pseudouridylate synthase AMBAS45_02835 PF00176 SNF2 family N-terminal domain AMBAS45_02835 PF12137 RNA polymerase recycling family C-terminal AMBAS45_02835 PF00271 Helicase conserved C-terminal domain AMBAS45_02835 PF18337 RapA N-terminal Tudor like domain AMBAS45_02835 PF18339 RapA N-terminal Tudor like domain 1 AMBAS45_02850 PF13638 PIN domain AMBAS45_02850 PF02562 PhoH-like protein AMBAS45_02855 PF00155 Aminotransferase class I and II AMBAS45_02855 PF00392 Bacterial regulatory proteins, gntR family AMBAS45_02860 PF12801 4Fe-4S binding domain AMBAS45_02860 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMBAS45_02860 PF13746 4Fe-4S dicluster domain AMBAS45_02880 PF10414 Sirohaem synthase dimerisation region AMBAS45_02880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMBAS45_02885 PF00270 DEAD/DEAH box helicase AMBAS45_02885 PF03880 DbpA RNA binding domain AMBAS45_02885 PF00271 Helicase conserved C-terminal domain AMBAS45_02905 PF02321 Outer membrane efflux protein AMBAS45_02910 PF00293 NUDIX domain AMBAS45_02920 PF00149 Calcineurin-like phosphoesterase AMBAS45_02925 PF05728 Uncharacterised protein family (UPF0227) AMBAS45_02930 PF01751 Toprim domain AMBAS45_02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_02930 PF00986 DNA gyrase B subunit, carboxyl terminus AMBAS45_02930 PF00204 DNA gyrase B AMBAS45_02940 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_02960 PF04055 Radical SAM superfamily AMBAS45_02970 PF00152 tRNA synthetases class II (D, K and N) AMBAS45_02975 PF00593 TonB dependent receptor AMBAS45_02975 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_02990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMBAS45_02995 PF05175 Methyltransferase small domain AMBAS45_03005 PF01722 BolA-like protein AMBAS45_03010 PF01569 PAP2 superfamily AMBAS45_03020 PF03861 ANTAR domain AMBAS45_03020 PF08376 Nitrate and nitrite sensing AMBAS45_03030 PF01548 Transposase AMBAS45_03030 PF02371 Transposase IS116/IS110/IS902 family AMBAS45_03035 PF00916 Sulfate permease family AMBAS45_03035 PF01740 STAS domain AMBAS45_03040 PF04324 BFD-like [2Fe-2S] binding domain AMBAS45_03040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMBAS45_03040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMBAS45_03040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_03040 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMBAS45_03045 PF13806 Rieske-like [2Fe-2S] domain AMBAS45_03050 PF04324 BFD-like [2Fe-2S] binding domain AMBAS45_03050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMBAS45_03050 PF00384 Molybdopterin oxidoreductase AMBAS45_03050 PF01568 Molydopterin dinucleotide binding domain AMBAS45_03055 PF10414 Sirohaem synthase dimerisation region AMBAS45_03055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMBAS45_03055 PF14824 Sirohaem biosynthesis protein central AMBAS45_03060 PF00591 Glycosyl transferase family, a/b domain AMBAS45_03060 PF02885 Glycosyl transferase family, helical bundle domain AMBAS45_03065 PF02872 5'-nucleotidase, C-terminal domain AMBAS45_03065 PF00149 Calcineurin-like phosphoesterase AMBAS45_03070 PF00072 Response regulator receiver domain AMBAS45_03070 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_03075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_03075 PF13426 PAS domain AMBAS45_03075 PF08447 PAS fold AMBAS45_03080 PF00005 ABC transporter AMBAS45_03085 PF00528 Binding-protein-dependent transport system inner membrane component AMBAS45_03090 PF00005 ABC transporter AMBAS45_03105 PF01323 DSBA-like thioredoxin domain AMBAS45_03110 PF00593 TonB dependent receptor AMBAS45_03110 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_03115 PF01636 Phosphotransferase enzyme family AMBAS45_03120 PF13746 4Fe-4S dicluster domain AMBAS45_03120 PF12801 4Fe-4S binding domain AMBAS45_03120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMBAS45_03135 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_03135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_03135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_03135 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMBAS45_03150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMBAS45_03150 PF13378 Enolase C-terminal domain-like AMBAS45_03155 PF00596 Class II Aldolase and Adducin N-terminal domain AMBAS45_03165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_03170 PF00873 AcrB/AcrD/AcrF family AMBAS45_03185 PF02743 Cache domain AMBAS45_03185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_03185 PF00672 HAMP domain AMBAS45_03190 PF03979 Sigma-70 factor, region 1.1 AMBAS45_03190 PF04539 Sigma-70 region 3 AMBAS45_03190 PF04546 Sigma-70, non-essential region AMBAS45_03190 PF04542 Sigma-70 region 2 AMBAS45_03190 PF00140 Sigma-70 factor, region 1.2 AMBAS45_03190 PF04545 Sigma-70, region 4 AMBAS45_03195 PF10410 DnaB-helicase binding domain of primase AMBAS45_03195 PF01807 CHC2 zinc finger AMBAS45_03195 PF08275 DNA primase catalytic core, N-terminal domain AMBAS45_03195 PF08278 DNA primase DnaG DnaB-binding AMBAS45_03205 PF01165 Ribosomal protein S21 AMBAS45_03210 PF00814 Glycoprotease family AMBAS45_03225 PF02152 Dihydroneopterin aldolase AMBAS45_03235 PF02673 Bacitracin resistance protein BacA AMBAS45_03240 PF01230 HIT domain AMBAS45_03255 PF03594 Benzoate membrane transport protein AMBAS45_03260 PF07883 Cupin domain AMBAS45_03260 PF01381 Helix-turn-helix AMBAS45_03265 PF04381 Putative exonuclease, RdgC AMBAS45_03270 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_03270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_03270 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBAS45_03275 PF00072 Response regulator receiver domain AMBAS45_03275 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_03280 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_03280 PF00989 PAS fold AMBAS45_03280 PF11808 Phosphate regulon sensor protein PhoR AMBAS45_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_03285 PF12849 PBP superfamily domain AMBAS45_03310 PF01618 MotA/TolQ/ExbB proton channel family AMBAS45_03315 PF01618 MotA/TolQ/ExbB proton channel family AMBAS45_03320 PF02472 Biopolymer transport protein ExbD/TolR AMBAS45_03325 PF03544 Gram-negative bacterial TonB protein C-terminal AMBAS45_03335 PF00072 Response regulator receiver domain AMBAS45_03340 PF01627 Hpt domain AMBAS45_03340 PF00072 Response regulator receiver domain AMBAS45_03340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBAS45_03340 PF00672 HAMP domain AMBAS45_03340 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_03350 PF13193 AMP-binding enzyme C-terminal domain AMBAS45_03350 PF00501 AMP-binding enzyme AMBAS45_03360 PF07995 Glucose / Sorbosone dehydrogenase AMBAS45_03365 PF11791 Aconitate B N-terminal domain AMBAS45_03365 PF06434 Aconitate hydratase 2 N-terminus AMBAS45_03365 PF00330 Aconitase family (aconitate hydratase) AMBAS45_03375 PF00072 Response regulator receiver domain AMBAS45_03375 PF01627 Hpt domain AMBAS45_03375 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_03375 PF00672 HAMP domain AMBAS45_03375 PF17149 Periplasmic sensor domain found in signal transduction proteins AMBAS45_03395 PF11791 Aconitate B N-terminal domain AMBAS45_03395 PF06434 Aconitate hydratase 2 N-terminus AMBAS45_03395 PF00330 Aconitase family (aconitate hydratase) AMBAS45_03405 PF01842 ACT domain AMBAS45_03405 PF00696 Amino acid kinase family AMBAS45_03415 PF00672 HAMP domain AMBAS45_03415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_03420 PF00149 Calcineurin-like phosphoesterase AMBAS45_03425 PF04379 ApaG domain AMBAS45_03430 PF00398 Ribosomal RNA adenine dimethylase AMBAS45_03435 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMBAS45_03440 PF09312 SurA N-terminal domain AMBAS45_03440 PF00639 PPIC-type PPIASE domain AMBAS45_03445 PF03968 OstA-like protein AMBAS45_03445 PF04453 LPS transport system D AMBAS45_03455 PF05099 Tellurite resistance protein TerB AMBAS45_03455 PF00226 DnaJ domain AMBAS45_03460 PF02899 Phage integrase, N-terminal SAM-like domain AMBAS45_03460 PF00589 Phage integrase family AMBAS45_03465 PF10411 Disulfide bond isomerase protein N-terminus AMBAS45_03465 PF13098 Thioredoxin-like domain AMBAS45_03470 PF17768 RecJ OB domain AMBAS45_03470 PF02272 DHHA1 domain AMBAS45_03470 PF01368 DHH family AMBAS45_03480 PF02565 Recombination protein O C terminal AMBAS45_03480 PF11967 Recombination protein O N terminal AMBAS45_03485 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMBAS45_03490 PF01648 4'-phosphopantetheinyl transferase superfamily AMBAS45_03495 PF05958 tRNA (Uracil-5-)-methyltransferase AMBAS45_03500 PF02824 TGS domain AMBAS45_03500 PF13291 ACT domain AMBAS45_03500 PF04607 Region found in RelA / SpoT proteins AMBAS45_03505 PF03819 MazG nucleotide pyrophosphohydrolase domain AMBAS45_03515 PF07660 Secretin and TonB N terminus short domain AMBAS45_03515 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_03515 PF00593 TonB dependent receptor AMBAS45_03530 PF00593 TonB dependent receptor AMBAS45_03530 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_03555 PF13193 AMP-binding enzyme C-terminal domain AMBAS45_03555 PF00501 AMP-binding enzyme AMBAS45_03565 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AMBAS45_03575 PF00535 Glycosyl transferase family 2 AMBAS45_03595 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_03595 PF08521 Two-component sensor kinase N-terminal AMBAS45_03600 PF00072 Response regulator receiver domain AMBAS45_03600 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_03610 PF00572 Ribosomal protein L13 AMBAS45_03615 PF00380 Ribosomal protein S9/S16 AMBAS45_03620 PF04542 Sigma-70 region 2 AMBAS45_03620 PF08281 Sigma-70, region 4 AMBAS45_03630 PF00593 TonB dependent receptor AMBAS45_03630 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_03640 PF01546 Peptidase family M20/M25/M40 AMBAS45_03645 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMBAS45_03645 PF00355 Rieske [2Fe-2S] domain AMBAS45_03650 PF00032 Cytochrome b(C-terminal)/b6/petD AMBAS45_03650 PF00033 Cytochrome b/b6/petB AMBAS45_03655 PF02167 Cytochrome C1 family AMBAS45_03660 PF00043 Glutathione S-transferase, C-terminal domain AMBAS45_03660 PF02798 Glutathione S-transferase, N-terminal domain AMBAS45_03665 PF04386 Stringent starvation protein B AMBAS45_03680 PF00072 Response regulator receiver domain AMBAS45_03680 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_03685 PF00571 CBS domain AMBAS45_03685 PF01769 Divalent cation transporter AMBAS45_03685 PF03448 MgtE intracellular N domain AMBAS45_03690 PF00381 PTS HPr component phosphorylation site AMBAS45_03695 PF03668 P-loop ATPase protein family AMBAS45_03700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMBAS45_03705 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMBAS45_03710 PF04963 Sigma-54 factor, core binding domain AMBAS45_03710 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMBAS45_03710 PF04552 Sigma-54, DNA binding domain AMBAS45_03715 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMBAS45_03715 PF00005 ABC transporter AMBAS45_03720 PF03968 OstA-like protein AMBAS45_03735 PF00571 CBS domain AMBAS45_03735 PF01380 SIS domain AMBAS45_03740 PF01699 Sodium/calcium exchanger protein AMBAS45_03745 PF00005 ABC transporter AMBAS45_03750 PF02405 Permease MlaE AMBAS45_03755 PF02470 MlaD protein AMBAS45_03760 PF05494 MlaC protein AMBAS45_03770 PF01722 BolA-like protein AMBAS45_03775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMBAS45_03780 PF13180 PDZ domain AMBAS45_03785 PF00595 PDZ domain AMBAS45_03785 PF13180 PDZ domain AMBAS45_03795 PF03969 AFG1-like ATPase AMBAS45_03800 PF01709 Transcriptional regulator AMBAS45_03820 PF00881 Nitroreductase family AMBAS45_03835 PF07549 SecD/SecF GG Motif AMBAS45_03835 PF02355 Protein export membrane protein AMBAS45_03840 PF03471 Transporter associated domain AMBAS45_03840 PF00999 Sodium/hydrogen exchanger family AMBAS45_03840 PF02080 TrkA-C domain AMBAS45_03845 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMBAS45_03845 PF07971 Glycosyl hydrolase family 92 AMBAS45_03850 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMBAS45_03850 PF07971 Glycosyl hydrolase family 92 AMBAS45_03860 PF07690 Major Facilitator Superfamily AMBAS45_03870 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_03885 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMBAS45_03890 PF01112 Asparaginase AMBAS45_03900 PF03932 CutC family AMBAS45_03910 PF00474 Sodium:solute symporter family AMBAS45_03915 PF17678 Glycosyl hydrolase family 92 N-terminal domain AMBAS45_03915 PF07971 Glycosyl hydrolase family 92 AMBAS45_03920 PF00593 TonB dependent receptor AMBAS45_03920 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_03925 PF00892 EamA-like transporter family AMBAS45_03945 PF13458 Periplasmic binding protein AMBAS45_03960 PF02772 S-adenosylmethionine synthetase, central domain AMBAS45_03960 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMBAS45_03960 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMBAS45_03965 PF00456 Transketolase, thiamine diphosphate binding domain AMBAS45_03965 PF02780 Transketolase, C-terminal domain AMBAS45_03965 PF02779 Transketolase, pyrimidine binding domain AMBAS45_03970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBAS45_03970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMBAS45_03975 PF00162 Phosphoglycerate kinase AMBAS45_03980 PF00274 Fructose-bisphosphate aldolase class-I AMBAS45_03990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_03990 PF00529 HlyD membrane-fusion protein of T1SS AMBAS45_03995 PF00873 AcrB/AcrD/AcrF family AMBAS45_04000 PF02321 Outer membrane efflux protein AMBAS45_04010 PF07676 WD40-like Beta Propeller Repeat AMBAS45_04010 PF00326 Prolyl oligopeptidase family AMBAS45_04020 PF02541 Ppx/GppA phosphatase family AMBAS45_04025 PF02503 Polyphosphate kinase middle domain AMBAS45_04025 PF13089 Polyphosphate kinase N-terminal domain AMBAS45_04025 PF17941 Polyphosphate kinase C-terminal domain 1 AMBAS45_04025 PF13090 Polyphosphate kinase C-terminal domain 2 AMBAS45_04035 PF00528 Binding-protein-dependent transport system inner membrane component AMBAS45_04040 PF00528 Binding-protein-dependent transport system inner membrane component AMBAS45_04045 PF00005 ABC transporter AMBAS45_04050 PF01895 PhoU domain AMBAS45_04055 PF01384 Phosphate transporter family AMBAS45_04065 PF03466 LysR substrate binding domain AMBAS45_04065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_04090 PF03006 Haemolysin-III related AMBAS45_04100 PF01047 MarR family AMBAS45_04105 PF02566 OsmC-like protein AMBAS45_04110 PF01433 Peptidase family M1 domain AMBAS45_04120 PF09186 Domain of unknown function (DUF1949) AMBAS45_04120 PF01205 Uncharacterized protein family UPF0029 AMBAS45_04130 PF13426 PAS domain AMBAS45_04130 PF08447 PAS fold AMBAS45_04130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_04140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_04140 PF03466 LysR substrate binding domain AMBAS45_04145 PF00248 Aldo/keto reductase family AMBAS45_04155 PF12320 Type 5 capsule protein repressor C-terminal domain AMBAS45_04155 PF00149 Calcineurin-like phosphoesterase AMBAS45_04160 PF13476 AAA domain AMBAS45_04170 PF00375 Sodium:dicarboxylate symporter family AMBAS45_04175 PF00491 Arginase family AMBAS45_04180 PF01979 Amidohydrolase family AMBAS45_04185 PF07702 UTRA domain AMBAS45_04185 PF00392 Bacterial regulatory proteins, gntR family AMBAS45_04195 PF00221 Aromatic amino acid lyase AMBAS45_04210 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMBAS45_04215 PF01979 Amidohydrolase family AMBAS45_04225 PF12848 ABC transporter AMBAS45_04225 PF00005 ABC transporter AMBAS45_04245 PF00924 Mechanosensitive ion channel AMBAS45_04255 PF07690 Major Facilitator Superfamily AMBAS45_04270 PF03150 Di-haem cytochrome c peroxidase AMBAS45_04300 PF04172 LrgB-like family AMBAS45_04305 PF00072 Response regulator receiver domain AMBAS45_04330 PF06969 HemN C-terminal domain AMBAS45_04330 PF04055 Radical SAM superfamily AMBAS45_04335 PF01725 Ham1 family AMBAS45_04340 PF00270 DEAD/DEAH box helicase AMBAS45_04340 PF00271 Helicase conserved C-terminal domain AMBAS45_04345 PF12627 Probable RNA and SrmB- binding site of polymerase A AMBAS45_04345 PF01743 Poly A polymerase head domain AMBAS45_04350 PF01471 Putative peptidoglycan binding domain AMBAS45_04350 PF13401 AAA domain AMBAS45_04360 PF11871 Domain of unknown function (DUF3391) AMBAS45_04360 PF01966 HD domain AMBAS45_04365 PF00694 Aconitase C-terminal domain AMBAS45_04370 PF00330 Aconitase family (aconitate hydratase) AMBAS45_04375 PF00180 Isocitrate/isopropylmalate dehydrogenase AMBAS45_04380 PF00682 HMGL-like AMBAS45_04380 PF08502 LeuA allosteric (dimerisation) domain AMBAS45_04395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMBAS45_04395 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMBAS45_04400 PF14592 Chondroitinase B AMBAS45_04405 PF05426 Alginate lyase AMBAS45_04405 PF07940 Heparinase II/III-like protein AMBAS45_04415 PF07690 Major Facilitator Superfamily AMBAS45_04420 PF00294 pfkB family carbohydrate kinase AMBAS45_04425 PF01081 KDPG and KHG aldolase AMBAS45_04430 PF00392 Bacterial regulatory proteins, gntR family AMBAS45_04430 PF07729 FCD domain AMBAS45_04435 PF08787 Alginate lyase AMBAS45_04450 PF08787 Alginate lyase AMBAS45_04460 PF00113 Enolase, C-terminal TIM barrel domain AMBAS45_04460 PF03952 Enolase, N-terminal domain AMBAS45_04465 PF00117 Glutamine amidotransferase class-I AMBAS45_04465 PF06418 CTP synthase N-terminus AMBAS45_04470 PF05192 MutS domain III AMBAS45_04470 PF05188 MutS domain II AMBAS45_04470 PF01624 MutS domain I AMBAS45_04470 PF00488 MutS domain V AMBAS45_04470 PF05190 MutS family domain IV AMBAS45_04475 PF02464 Competence-damaged protein AMBAS45_04480 PF00154 recA bacterial DNA recombination protein AMBAS45_04485 PF00005 ABC transporter AMBAS45_04490 PF12679 ABC-2 family transporter protein AMBAS45_04505 PF00005 ABC transporter AMBAS45_04510 PF03379 CcmB protein AMBAS45_04515 PF01578 Cytochrome C assembly protein AMBAS45_04520 PF04995 Heme exporter protein D (CcmD) AMBAS45_04525 PF03100 CcmE AMBAS45_04530 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMBAS45_04530 PF01578 Cytochrome C assembly protein AMBAS45_04535 PF08534 Redoxin AMBAS45_04540 PF03918 Cytochrome C biogenesis protein AMBAS45_04550 PF04333 MlaA lipoprotein AMBAS45_04555 PF16363 GDP-mannose 4,6 dehydratase AMBAS45_04565 PF00854 POT family AMBAS45_04575 PF00005 ABC transporter AMBAS45_04585 PF02563 Polysaccharide biosynthesis/export protein AMBAS45_04585 PF10531 SLBB domain AMBAS45_04595 PF00953 Glycosyl transferase family 4 AMBAS45_04600 PF00535 Glycosyl transferase family 2 AMBAS45_04610 PF00483 Nucleotidyl transferase AMBAS45_04615 PF10531 SLBB domain AMBAS45_04620 PF18324 Hypothetical protein TT1725 AMBAS45_04620 PF00180 Isocitrate/isopropylmalate dehydrogenase AMBAS45_04630 PF11892 Domain of unknown function (DUF3412) AMBAS45_04630 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AMBAS45_04630 PF03641 Possible lysine decarboxylase AMBAS45_04635 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_04635 PF00072 Response regulator receiver domain AMBAS45_04640 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMBAS45_04640 PF14489 QueF-like protein AMBAS45_04645 PF07348 Syd protein (SUKH-2) AMBAS45_04680 PF00849 RNA pseudouridylate synthase AMBAS45_04685 PF00258 Flavodoxin AMBAS45_04690 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMBAS45_04690 PF00132 Bacterial transferase hexapeptide (six repeats) AMBAS45_04690 PF14602 Hexapeptide repeat of succinyl-transferase AMBAS45_04695 PF01909 Nucleotidyltransferase domain AMBAS45_04695 PF01966 HD domain AMBAS45_04695 PF08335 GlnD PII-uridylyltransferase AMBAS45_04700 PF00557 Metallopeptidase family M24 AMBAS45_04705 PF00318 Ribosomal protein S2 AMBAS45_04710 PF00889 Elongation factor TS AMBAS45_04715 PF00696 Amino acid kinase family AMBAS45_04720 PF01765 Ribosome recycling factor AMBAS45_04725 PF01255 Putative undecaprenyl diphosphate synthase AMBAS45_04735 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMBAS45_04735 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMBAS45_04735 PF13288 DXP reductoisomerase C-terminal domain AMBAS45_04740 PF02163 Peptidase family M50 AMBAS45_04740 PF17820 PDZ domain AMBAS45_04745 PF07244 Surface antigen variable number repeat AMBAS45_04745 PF01103 Surface antigen AMBAS45_04750 PF03938 Outer membrane protein (OmpH-like) AMBAS45_04755 PF07977 FabA-like domain AMBAS45_04760 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMBAS45_04760 PF00132 Bacterial transferase hexapeptide (six repeats) AMBAS45_04765 PF02684 Lipid-A-disaccharide synthetase AMBAS45_04770 PF01351 Ribonuclease HII AMBAS45_04775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMBAS45_04775 PF14579 Helix-hairpin-helix motif AMBAS45_04775 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMBAS45_04775 PF02811 PHP domain AMBAS45_04775 PF01336 OB-fold nucleic acid binding domain AMBAS45_04780 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMBAS45_04785 PF11734 TilS substrate C-terminal domain AMBAS45_04785 PF09179 TilS substrate binding domain AMBAS45_04785 PF01171 PP-loop family AMBAS45_04790 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_04790 PF00563 EAL domain AMBAS45_04790 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_04795 PF02254 TrkA-N domain AMBAS45_04795 PF02080 TrkA-C domain AMBAS45_04795 PF00999 Sodium/hydrogen exchanger family AMBAS45_04805 PF14437 MafB19-like deaminase AMBAS45_04815 PF01464 Transglycosylase SLT domain AMBAS45_04815 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBAS45_04820 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AMBAS45_04820 PF02769 AIR synthase related protein, C-terminal domain AMBAS45_04820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMBAS45_04825 PF01713 Smr domain AMBAS45_04855 PF01584 CheW-like domain AMBAS45_04855 PF00072 Response regulator receiver domain AMBAS45_04860 PF03705 CheR methyltransferase, all-alpha domain AMBAS45_04860 PF01739 CheR methyltransferase, SAM binding domain AMBAS45_04865 PF00460 Flagella basal body rod protein AMBAS45_04870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMBAS45_04870 PF00460 Flagella basal body rod protein AMBAS45_04875 PF03963 Flagellar hook capping protein - N-terminal region AMBAS45_04875 PF13860 FlgD Ig-like domain AMBAS45_04875 PF13861 FlgD Tudor-like domain AMBAS45_04880 PF00460 Flagella basal body rod protein AMBAS45_04880 PF07559 Flagellar basal body protein FlaE AMBAS45_04880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMBAS45_04885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMBAS45_04885 PF00460 Flagella basal body rod protein AMBAS45_04890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMBAS45_04890 PF00460 Flagella basal body rod protein AMBAS45_04895 PF02107 Flagellar L-ring protein AMBAS45_04900 PF02119 Flagellar P-ring protein AMBAS45_04905 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMBAS45_04905 PF10135 Rod binding protein AMBAS45_04925 PF07196 Flagellin hook IN motif AMBAS45_04925 PF00669 Bacterial flagellin N-terminal helical region AMBAS45_04925 PF00700 Bacterial flagellin C-terminal helical region AMBAS45_04930 PF00669 Bacterial flagellin N-terminal helical region AMBAS45_04930 PF00700 Bacterial flagellin C-terminal helical region AMBAS45_04930 PF07196 Flagellin hook IN motif AMBAS45_04935 PF07196 Flagellin hook IN motif AMBAS45_04935 PF00669 Bacterial flagellin N-terminal helical region AMBAS45_04935 PF00700 Bacterial flagellin C-terminal helical region AMBAS45_04940 PF03646 FlaG protein AMBAS45_04945 PF07195 Flagellar hook-associated protein 2 C-terminus AMBAS45_04945 PF07196 Flagellin hook IN motif AMBAS45_04945 PF02465 Flagellar hook-associated protein 2 N-terminus AMBAS45_04950 PF02561 Flagellar protein FliS AMBAS45_04965 PF00535 Glycosyl transferase family 2 AMBAS45_04970 PF00535 Glycosyl transferase family 2 AMBAS45_04975 PF16363 GDP-mannose 4,6 dehydratase AMBAS45_04980 PF01370 NAD dependent epimerase/dehydratase family AMBAS45_04990 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AMBAS45_04995 PF00534 Glycosyl transferases group 1 AMBAS45_04995 PF13439 Glycosyltransferase Family 4 AMBAS45_05000 PF06463 Molybdenum Cofactor Synthesis C AMBAS45_05000 PF04055 Radical SAM superfamily AMBAS45_05005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMBAS45_05010 PF02719 Polysaccharide biosynthesis protein AMBAS45_05025 PF04991 LicD family AMBAS45_05030 PF03102 NeuB family AMBAS45_05030 PF08666 SAF domain AMBAS45_05040 PF02348 Cytidylyltransferase AMBAS45_05045 PF01467 Cytidylyltransferase-like AMBAS45_05050 PF00700 Bacterial flagellin C-terminal helical region AMBAS45_05050 PF00669 Bacterial flagellin N-terminal helical region AMBAS45_05055 PF02954 Bacterial regulatory protein, Fis family AMBAS45_05055 PF00072 Response regulator receiver domain AMBAS45_05055 PF00158 Sigma-54 interaction domain AMBAS45_05060 PF00989 PAS fold AMBAS45_05060 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_05060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_05065 PF02954 Bacterial regulatory protein, Fis family AMBAS45_05065 PF00158 Sigma-54 interaction domain AMBAS45_05065 PF00072 Response regulator receiver domain AMBAS45_05070 PF02049 Flagellar hook-basal body complex protein FliE AMBAS45_05075 PF01514 Secretory protein of YscJ/FliF family AMBAS45_05075 PF08345 Flagellar M-ring protein C-terminal AMBAS45_05080 PF01706 FliG C-terminal domain AMBAS45_05080 PF14842 FliG N-terminal domain AMBAS45_05080 PF14841 FliG middle domain AMBAS45_05090 PF18269 T3SS EscN ATPase C-terminal domain AMBAS45_05090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMBAS45_05110 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMBAS45_05110 PF02154 Flagellar motor switch protein FliM AMBAS45_05115 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMBAS45_05120 PF04347 Flagellar biosynthesis protein, FliO AMBAS45_05125 PF00813 FliP family AMBAS45_05130 PF01313 Bacterial export proteins, family 3 AMBAS45_05135 PF01311 Bacterial export proteins, family 1 AMBAS45_05140 PF01312 FlhB HrpN YscU SpaS Family AMBAS45_05150 PF00771 FHIPEP family AMBAS45_05155 PF00448 SRP54-type protein, GTPase domain AMBAS45_05160 PF10609 NUBPL iron-transfer P-loop NTPase AMBAS45_05165 PF04539 Sigma-70 region 3 AMBAS45_05165 PF04542 Sigma-70 region 2 AMBAS45_05165 PF04545 Sigma-70, region 4 AMBAS45_05170 PF00072 Response regulator receiver domain AMBAS45_05175 PF04344 Chemotaxis phosphatase, CheZ AMBAS45_05180 PF02895 Signal transducing histidine kinase, homodimeric domain AMBAS45_05180 PF01584 CheW-like domain AMBAS45_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_05180 PF01627 Hpt domain AMBAS45_05180 PF07194 P2 response regulator binding domain AMBAS45_05190 PF13614 AAA domain AMBAS45_05200 PF01584 CheW-like domain AMBAS45_05215 PF04204 Homoserine O-succinyltransferase AMBAS45_05220 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMBAS45_05220 PF02607 B12 binding domain AMBAS45_05220 PF00809 Pterin binding enzyme AMBAS45_05220 PF02310 B12 binding domain AMBAS45_05220 PF02574 Homocysteine S-methyltransferase AMBAS45_05225 PF02310 B12 binding domain AMBAS45_05225 PF02607 B12 binding domain AMBAS45_05225 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMBAS45_05225 PF02574 Homocysteine S-methyltransferase AMBAS45_05225 PF00809 Pterin binding enzyme AMBAS45_05235 PF06865 Pyrimidine/purine nucleoside phosphorylase AMBAS45_05240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_05240 PF02743 Cache domain AMBAS45_05240 PF00672 HAMP domain AMBAS45_05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_05245 PF03466 LysR substrate binding domain AMBAS45_05250 PF03466 LysR substrate binding domain AMBAS45_05250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_05255 PF00484 Carbonic anhydrase AMBAS45_05260 PF00916 Sulfate permease family AMBAS45_05260 PF01740 STAS domain AMBAS45_05270 PF13977 BetI-type transcriptional repressor, C-terminal AMBAS45_05270 PF00440 Bacterial regulatory proteins, tetR family AMBAS45_05275 PF05649 Peptidase family M13 AMBAS45_05275 PF01431 Peptidase family M13 AMBAS45_05285 PF02631 RecX family AMBAS45_05290 PF02272 DHHA1 domain AMBAS45_05290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMBAS45_05290 PF01411 tRNA synthetases class II (A) AMBAS45_05295 PF02599 Global regulator protein family AMBAS45_05300 PF03061 Thioesterase superfamily AMBAS45_05310 PF02436 Conserved carboxylase domain AMBAS45_05310 PF00682 HMGL-like AMBAS45_05310 PF00364 Biotin-requiring enzyme AMBAS45_05315 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AMBAS45_05320 PF00005 ABC transporter AMBAS45_05325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMBAS45_05325 PF00005 ABC transporter AMBAS45_05330 PF00528 Binding-protein-dependent transport system inner membrane component AMBAS45_05330 PF12911 N-terminal TM domain of oligopeptide transport permease C AMBAS45_05335 PF00528 Binding-protein-dependent transport system inner membrane component AMBAS45_05340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMBAS45_05345 PF02954 Bacterial regulatory protein, Fis family AMBAS45_05345 PF00158 Sigma-54 interaction domain AMBAS45_05350 PF04012 PspA/IM30 family AMBAS45_05365 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMBAS45_05370 PF18024 Helix-turn-helix domain AMBAS45_05370 PF00158 Sigma-54 interaction domain AMBAS45_05380 PF02798 Glutathione S-transferase, N-terminal domain AMBAS45_05380 PF14497 Glutathione S-transferase, C-terminal domain AMBAS45_05385 PF01037 Lrp/AsnC ligand binding domain AMBAS45_05390 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMBAS45_05390 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBAS45_05400 PF03301 Tryptophan 2,3-dioxygenase AMBAS45_05405 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_05405 PF00593 TonB dependent receptor AMBAS45_05410 PF01209 ubiE/COQ5 methyltransferase family AMBAS45_05420 PF01618 MotA/TolQ/ExbB proton channel family AMBAS45_05425 PF01618 MotA/TolQ/ExbB proton channel family AMBAS45_05430 PF02472 Biopolymer transport protein ExbD/TolR AMBAS45_05435 PF03544 Gram-negative bacterial TonB protein C-terminal AMBAS45_05445 PF08351 Domain of unknown function (DUF1726) AMBAS45_05445 PF13718 GNAT acetyltransferase 2 AMBAS45_05445 PF17176 tRNA-binding domain AMBAS45_05445 PF05127 Helicase AMBAS45_05470 PF01636 Phosphotransferase enzyme family AMBAS45_05475 PF01548 Transposase AMBAS45_05475 PF02371 Transposase IS116/IS110/IS902 family AMBAS45_05485 PF00583 Acetyltransferase (GNAT) family AMBAS45_05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_05500 PF03466 LysR substrate binding domain AMBAS45_05505 PF07690 Major Facilitator Superfamily AMBAS45_05510 PF00296 Luciferase-like monooxygenase AMBAS45_05515 PF00248 Aldo/keto reductase family AMBAS45_05530 PF00529 HlyD membrane-fusion protein of T1SS AMBAS45_05530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_05535 PF01047 MarR family AMBAS45_05540 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_05540 PF00593 TonB dependent receptor AMBAS45_05545 PF04397 LytTr DNA-binding domain AMBAS45_05545 PF00072 Response regulator receiver domain AMBAS45_05550 PF07694 5TMR of 5TMR-LYT AMBAS45_05550 PF06580 Histidine kinase AMBAS45_05555 PF02554 Carbon starvation protein CstA AMBAS45_05560 PF16658 Class II release factor RF3, C-terminal domain AMBAS45_05560 PF00009 Elongation factor Tu GTP binding domain AMBAS45_05560 PF03144 Elongation factor Tu domain 2 AMBAS45_05565 PF03485 Arginyl tRNA synthetase N terminal domain AMBAS45_05565 PF00750 tRNA synthetases class I (R) AMBAS45_05565 PF05746 DALR anticodon binding domain AMBAS45_05585 PF00072 Response regulator receiver domain AMBAS45_05585 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_05590 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_05590 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_05590 PF00563 EAL domain AMBAS45_05600 PF00291 Pyridoxal-phosphate dependent enzyme AMBAS45_05610 PF17158 Membrane-associated sensor, integral membrane domain AMBAS45_05610 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_05615 PF04224 Protein of unknown function, DUF417 AMBAS45_05630 PF17158 Membrane-associated sensor, integral membrane domain AMBAS45_05630 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_05640 PF00487 Fatty acid desaturase AMBAS45_05645 PF00970 Oxidoreductase FAD-binding domain AMBAS45_05645 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBAS45_05645 PF00175 Oxidoreductase NAD-binding domain AMBAS45_05650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBAS45_05660 PF03462 PCRF domain AMBAS45_05660 PF00472 RF-1 domain AMBAS45_05665 PF00152 tRNA synthetases class II (D, K and N) AMBAS45_05665 PF01336 OB-fold nucleic acid binding domain AMBAS45_05675 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMBAS45_05680 PF02558 Ketopantoate reductase PanE/ApbA AMBAS45_05680 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMBAS45_05685 PF00849 RNA pseudouridylate synthase AMBAS45_05695 PF05193 Peptidase M16 inactive domain AMBAS45_05695 PF00675 Insulinase (Peptidase family M16) AMBAS45_05700 PF04262 Glutamate-cysteine ligase AMBAS45_05725 PF01713 Smr domain AMBAS45_05730 PF05175 Methyltransferase small domain AMBAS45_05735 PF01264 Chorismate synthase AMBAS45_05745 PF04293 SpoVR like protein AMBAS45_05750 PF04285 Protein of unknown function (DUF444) AMBAS45_05755 PF06798 PrkA serine protein kinase C-terminal domain AMBAS45_05755 PF08298 PrkA AAA domain AMBAS45_05765 PF00462 Glutaredoxin AMBAS45_05770 PF00593 TonB dependent receptor AMBAS45_05770 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_05790 PF04324 BFD-like [2Fe-2S] binding domain AMBAS45_05795 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMBAS45_05795 PF00578 AhpC/TSA family AMBAS45_05800 PF00929 Exonuclease AMBAS45_05805 PF00691 OmpA family AMBAS45_05805 PF18393 MotY N-terminal domain AMBAS45_05810 PF03009 Glycerophosphoryl diester phosphodiesterase family AMBAS45_05815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBAS45_05820 PF00106 short chain dehydrogenase AMBAS45_05825 PF00313 'Cold-shock' DNA-binding domain AMBAS45_05835 PF02225 PA domain AMBAS45_05835 PF04389 Peptidase family M28 AMBAS45_05845 PF10576 Iron-sulfur binding domain of endonuclease III AMBAS45_05845 PF00633 Helix-hairpin-helix motif AMBAS45_05845 PF00730 HhH-GPD superfamily base excision DNA repair protein AMBAS45_05850 PF02508 Rnf-Nqr subunit, membrane protein AMBAS45_05855 PF04205 FMN-binding domain AMBAS45_05860 PF03116 NQR2, RnfD, RnfE family AMBAS45_05865 PF13375 RnfC Barrel sandwich hybrid domain AMBAS45_05865 PF10531 SLBB domain AMBAS45_05865 PF12838 4Fe-4S dicluster domain AMBAS45_05865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMBAS45_05870 PF04060 Putative Fe-S cluster AMBAS45_05880 PF01554 MatE AMBAS45_05885 PF00271 Helicase conserved C-terminal domain AMBAS45_05885 PF17757 UvrB interaction domain AMBAS45_05885 PF04851 Type III restriction enzyme, res subunit AMBAS45_05885 PF12344 Ultra-violet resistance protein B AMBAS45_05885 PF02151 UvrB/uvrC motif AMBAS45_05895 PF06508 Queuosine biosynthesis protein QueC AMBAS45_05900 PF04055 Radical SAM superfamily AMBAS45_05910 PF00733 Asparagine synthase AMBAS45_05910 PF13537 Glutamine amidotransferase domain AMBAS45_05930 PF02080 TrkA-C domain AMBAS45_05930 PF03600 Citrate transporter AMBAS45_05935 PF00009 Elongation factor Tu GTP binding domain AMBAS45_05940 PF00459 Inositol monophosphatase family AMBAS45_05950 PF01507 Phosphoadenosine phosphosulfate reductase family AMBAS45_05955 PF00474 Sodium:solute symporter family AMBAS45_05960 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_05970 PF08281 Sigma-70, region 4 AMBAS45_05970 PF04542 Sigma-70 region 2 AMBAS45_05985 PF07584 Aerotolerance regulator N-terminal AMBAS45_05985 PF00092 von Willebrand factor type A domain AMBAS45_05990 PF00092 von Willebrand factor type A domain AMBAS45_06000 PF01882 Protein of unknown function DUF58 AMBAS45_06005 PF07726 ATPase family associated with various cellular activities (AAA) AMBAS45_06005 PF17863 AAA lid domain AMBAS45_06010 PF02803 Thiolase, C-terminal domain AMBAS45_06010 PF00108 Thiolase, N-terminal domain AMBAS45_06015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMBAS45_06015 PF00378 Enoyl-CoA hydratase/isomerase AMBAS45_06015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMBAS45_06030 PF00563 EAL domain AMBAS45_06030 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_06030 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_06035 PF00675 Insulinase (Peptidase family M16) AMBAS45_06035 PF05193 Peptidase M16 inactive domain AMBAS45_06040 PF00300 Histidine phosphatase superfamily (branch 1) AMBAS45_06050 PF03471 Transporter associated domain AMBAS45_06050 PF00571 CBS domain AMBAS45_06050 PF01595 Cyclin M transmembrane N-terminal domain AMBAS45_06055 PF01578 Cytochrome C assembly protein AMBAS45_06060 PF02978 Signal peptide binding domain AMBAS45_06060 PF00448 SRP54-type protein, GTPase domain AMBAS45_06060 PF02881 SRP54-type protein, helical bundle domain AMBAS45_06095 PF00873 AcrB/AcrD/AcrF family AMBAS45_06100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_06105 PF00664 ABC transporter transmembrane region AMBAS45_06105 PF00005 ABC transporter AMBAS45_06115 PF00886 Ribosomal protein S16 AMBAS45_06120 PF01782 RimM N-terminal domain AMBAS45_06120 PF05239 PRC-barrel domain AMBAS45_06125 PF01746 tRNA (Guanine-1)-methyltransferase AMBAS45_06130 PF01245 Ribosomal protein L19 AMBAS45_06140 PF03458 UPF0126 domain AMBAS45_06145 PF00378 Enoyl-CoA hydratase/isomerase AMBAS45_06160 PF00793 DAHP synthetase I family AMBAS45_06165 PF01817 Chorismate mutase type II AMBAS45_06165 PF02153 Prephenate dehydrogenase AMBAS45_06190 PF17151 Periplasmic sensor domain AMBAS45_06190 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_06195 PF01817 Chorismate mutase type II AMBAS45_06195 PF00800 Prephenate dehydratase AMBAS45_06200 PF00072 Response regulator receiver domain AMBAS45_06205 PF01253 Translation initiation factor SUI1 AMBAS45_06215 PF00072 Response regulator receiver domain AMBAS45_06215 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_06225 PF00563 EAL domain AMBAS45_06225 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_06225 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_06235 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_06245 PF00072 Response regulator receiver domain AMBAS45_06245 PF00158 Sigma-54 interaction domain AMBAS45_06260 PF02938 GAD domain AMBAS45_06260 PF00152 tRNA synthetases class II (D, K and N) AMBAS45_06260 PF01336 OB-fold nucleic acid binding domain AMBAS45_06265 PF00293 NUDIX domain AMBAS45_06270 PF02075 Crossover junction endodeoxyribonuclease RuvC AMBAS45_06280 PF17864 RuvB AAA lid domain AMBAS45_06280 PF05491 RuvB C-terminal winged helix domain AMBAS45_06280 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMBAS45_06285 PF03061 Thioesterase superfamily AMBAS45_06290 PF01618 MotA/TolQ/ExbB proton channel family AMBAS45_06295 PF02472 Biopolymer transport protein ExbD/TolR AMBAS45_06305 PF07676 WD40-like Beta Propeller Repeat AMBAS45_06305 PF04052 TolB amino-terminal domain AMBAS45_06310 PF00691 OmpA family AMBAS45_06315 PF16331 TolA binding protein trimerisation AMBAS45_06315 PF13174 Tetratricopeptide repeat AMBAS45_06320 PF02445 Quinolinate synthetase A protein AMBAS45_06325 PF00589 Phage integrase family AMBAS45_06325 PF13356 Arm DNA-binding domain AMBAS45_06370 PF01343 Peptidase family S49 AMBAS45_06375 PF00589 Phage integrase family AMBAS45_06395 PF01734 Patatin-like phospholipase AMBAS45_06400 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMBAS45_06400 PF02558 Ketopantoate reductase PanE/ApbA AMBAS45_06410 PF09308 LuxQ, periplasmic AMBAS45_06410 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_06410 PF00072 Response regulator receiver domain AMBAS45_06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_06420 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMBAS45_06420 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMBAS45_06425 PF01292 Prokaryotic cytochrome b561 AMBAS45_06430 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_06430 PF00563 EAL domain AMBAS45_06430 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_06445 PF01863 Protein of unknown function DUF45 AMBAS45_06455 PF00873 AcrB/AcrD/AcrF family AMBAS45_06465 PF00440 Bacterial regulatory proteins, tetR family AMBAS45_06465 PF08361 MAATS-type transcriptional repressor, C-terminal region AMBAS45_06470 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_06470 PF00593 TonB dependent receptor AMBAS45_06480 PF00873 AcrB/AcrD/AcrF family AMBAS45_06490 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_06500 PF02470 MlaD protein AMBAS45_06505 PF04403 Paraquat-inducible protein A AMBAS45_06515 PF01336 OB-fold nucleic acid binding domain AMBAS45_06515 PF00152 tRNA synthetases class II (D, K and N) AMBAS45_06525 PF01699 Sodium/calcium exchanger protein AMBAS45_06530 PF18030 RimK PreATP-grasp domain AMBAS45_06530 PF08443 RimK-like ATP-grasp domain AMBAS45_06550 PF00202 Aminotransferase class-III AMBAS45_06555 PF06968 Biotin and Thiamin Synthesis associated domain AMBAS45_06555 PF04055 Radical SAM superfamily AMBAS45_06560 PF00155 Aminotransferase class I and II AMBAS45_06565 PF08241 Methyltransferase domain AMBAS45_06565 PF12697 Alpha/beta hydrolase family AMBAS45_06575 PF03575 Peptidase family S51 AMBAS45_06580 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMBAS45_06585 PF01032 FecCD transport family AMBAS45_06590 PF00005 ABC transporter AMBAS45_06595 PF01474 Class-II DAHP synthetase family AMBAS45_06610 PF13493 Domain of unknown function (DUF4118) AMBAS45_06610 PF02702 Osmosensitive K+ channel His kinase sensor domain AMBAS45_06610 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_06615 PF00072 Response regulator receiver domain AMBAS45_06615 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_06620 PF02254 TrkA-N domain AMBAS45_06620 PF02080 TrkA-C domain AMBAS45_06625 PF02386 Cation transport protein AMBAS45_06640 PF00664 ABC transporter transmembrane region AMBAS45_06640 PF00005 ABC transporter AMBAS45_06650 PF06463 Molybdenum Cofactor Synthesis C AMBAS45_06650 PF04055 Radical SAM superfamily AMBAS45_06660 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_06660 PF00072 Response regulator receiver domain AMBAS45_06670 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMBAS45_06690 PF01207 Dihydrouridine synthase (Dus) AMBAS45_06705 PF13472 GDSL-like Lipase/Acylhydrolase family AMBAS45_06710 PF00005 ABC transporter AMBAS45_06720 PF08338 Domain of unknown function (DUF1731) AMBAS45_06720 PF01370 NAD dependent epimerase/dehydratase family AMBAS45_06725 PF02152 Dihydroneopterin aldolase AMBAS45_06730 PF01594 AI-2E family transporter AMBAS45_06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_06735 PF08918 PhoQ Sensor AMBAS45_06740 PF00072 Response regulator receiver domain AMBAS45_06740 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_06755 PF03795 YCII-related domain AMBAS45_06760 PF00290 Tryptophan synthase alpha chain AMBAS45_06765 PF00291 Pyridoxal-phosphate dependent enzyme AMBAS45_06770 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMBAS45_06770 PF00218 Indole-3-glycerol phosphate synthase AMBAS45_06775 PF00591 Glycosyl transferase family, a/b domain AMBAS45_06775 PF02885 Glycosyl transferase family, helical bundle domain AMBAS45_06780 PF00117 Glutamine amidotransferase class-I AMBAS45_06785 PF00425 chorismate binding enzyme AMBAS45_06785 PF04715 Anthranilate synthase component I, N terminal region AMBAS45_06790 PF02811 PHP domain AMBAS45_06795 PF01300 Telomere recombination AMBAS45_06800 PF02616 Segregation and condensation protein ScpA AMBAS45_06805 PF04079 Segregation and condensation complex subunit ScpB AMBAS45_06810 PF00849 RNA pseudouridylate synthase AMBAS45_06810 PF01479 S4 domain AMBAS45_06815 PF00248 Aldo/keto reductase family AMBAS45_06820 PF14602 Hexapeptide repeat of succinyl-transferase AMBAS45_06820 PF12464 Maltose acetyltransferase AMBAS45_06830 PF03960 ArsC family AMBAS45_06835 PF04286 Protein of unknown function (DUF445) AMBAS45_06840 PF05724 Thiopurine S-methyltransferase (TPMT) AMBAS45_06845 PF04355 SmpA / OmlA family AMBAS45_06850 PF02463 RecF/RecN/SMC N terminal domain AMBAS45_06855 PF00210 Ferritin-like domain AMBAS45_06870 PF00465 Iron-containing alcohol dehydrogenase AMBAS45_06885 PF00561 alpha/beta hydrolase fold AMBAS45_06895 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_06895 PF00593 TonB dependent receptor AMBAS45_06900 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_06900 PF00072 Response regulator receiver domain AMBAS45_06920 PF00072 Response regulator receiver domain AMBAS45_06920 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_06925 PF00672 HAMP domain AMBAS45_06925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_06925 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_06930 PF00144 Beta-lactamase AMBAS45_06930 PF11954 Domain of unknown function (DUF3471) AMBAS45_06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_06965 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_06965 PF01627 Hpt domain AMBAS45_06965 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBAS45_06965 PF00072 Response regulator receiver domain AMBAS45_06970 PF01025 GrpE AMBAS45_06975 PF00012 Hsp70 protein AMBAS45_06980 PF00226 DnaJ domain AMBAS45_06980 PF01556 DnaJ C terminal domain AMBAS45_06980 PF00684 DnaJ central domain AMBAS45_06985 PF01322 Cytochrome C' AMBAS45_06995 PF13426 PAS domain AMBAS45_06995 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_06995 PF00563 EAL domain AMBAS45_07000 PF13193 AMP-binding enzyme C-terminal domain AMBAS45_07000 PF16177 Acetyl-coenzyme A synthetase N-terminus AMBAS45_07000 PF00501 AMP-binding enzyme AMBAS45_07010 PF01113 Dihydrodipicolinate reductase, N-terminus AMBAS45_07010 PF05173 Dihydrodipicolinate reductase, C-terminus AMBAS45_07015 PF00117 Glutamine amidotransferase class-I AMBAS45_07015 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMBAS45_07020 PF02142 MGS-like domain AMBAS45_07020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMBAS45_07020 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMBAS45_07025 PF03449 Transcription elongation factor, N-terminal AMBAS45_07025 PF01272 Transcription elongation factor, GreA/GreB, C-term AMBAS45_07040 PF02371 Transposase IS116/IS110/IS902 family AMBAS45_07040 PF01548 Transposase AMBAS45_07050 PF00011 Hsp20/alpha crystallin family AMBAS45_07055 PF00871 Acetokinase family AMBAS45_07060 PF07085 DRTGG domain AMBAS45_07060 PF01515 Phosphate acetyl/butaryl transferase AMBAS45_07070 PF00795 Carbon-nitrogen hydrolase AMBAS45_07075 PF03471 Transporter associated domain AMBAS45_07075 PF00571 CBS domain AMBAS45_07080 PF02130 Uncharacterized protein family UPF0054 AMBAS45_07085 PF02562 PhoH-like protein AMBAS45_07090 PF01938 TRAM domain AMBAS45_07090 PF04055 Radical SAM superfamily AMBAS45_07090 PF00919 Uncharacterized protein family UPF0004 AMBAS45_07095 PF01494 FAD binding domain AMBAS45_07130 PF00593 TonB dependent receptor AMBAS45_07130 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_07135 PF03061 Thioesterase superfamily AMBAS45_07140 PF01613 Flavin reductase like domain AMBAS45_07150 PF01235 Sodium:alanine symporter family AMBAS45_07160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMBAS45_07165 PF01926 50S ribosome-binding GTPase AMBAS45_07165 PF06071 Protein of unknown function (DUF933) AMBAS45_07170 PF01195 Peptidyl-tRNA hydrolase AMBAS45_07180 PF14693 Ribosomal protein TL5, C-terminal domain AMBAS45_07180 PF01386 Ribosomal L25p family AMBAS45_07185 PF08240 Alcohol dehydrogenase GroES-like domain AMBAS45_07185 PF00107 Zinc-binding dehydrogenase AMBAS45_07195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMBAS45_07195 PF14572 Phosphoribosyl synthetase-associated domain AMBAS45_07200 PF00288 GHMP kinases N terminal domain AMBAS45_07200 PF08544 GHMP kinases C terminal AMBAS45_07205 PF03550 Outer membrane lipoprotein LolB AMBAS45_07210 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMBAS45_07210 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMBAS45_07210 PF01488 Shikimate / quinate 5-dehydrogenase AMBAS45_07215 PF00472 RF-1 domain AMBAS45_07215 PF03462 PCRF domain AMBAS45_07220 PF17827 PrmC N-terminal domain AMBAS45_07220 PF13847 Methyltransferase domain AMBAS45_07225 PF11849 Domain of unknown function (DUF3369) AMBAS45_07230 PF04247 Invasion gene expression up-regulator, SirB AMBAS45_07245 PF03466 LysR substrate binding domain AMBAS45_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_07260 PF18125 RlmM ferredoxin-like domain AMBAS45_07260 PF01728 FtsJ-like methyltransferase AMBAS45_07265 PF00009 Elongation factor Tu GTP binding domain AMBAS45_07265 PF03144 Elongation factor Tu domain 2 AMBAS45_07265 PF03764 Elongation factor G, domain IV AMBAS45_07265 PF14492 Elongation Factor G, domain II AMBAS45_07265 PF00679 Elongation factor G C-terminus AMBAS45_07270 PF02560 Cyanate lyase C-terminal domain AMBAS45_07275 PF00069 Protein kinase domain AMBAS45_07280 PF01226 Formate/nitrite transporter AMBAS45_07285 PF13559 Domain of unknown function (DUF4129) AMBAS45_07285 PF01841 Transglutaminase-like superfamily AMBAS45_07285 PF11992 Domain of unknown function (DUF3488) AMBAS45_07295 PF07726 ATPase family associated with various cellular activities (AAA) AMBAS45_07295 PF17863 AAA lid domain AMBAS45_07300 PF17206 SeqA protein N-terminal domain AMBAS45_07300 PF03925 SeqA protein C-terminal domain AMBAS45_07305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMBAS45_07305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMBAS45_07305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMBAS45_07305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMBAS45_07310 PF00343 Carbohydrate phosphorylase AMBAS45_07315 PF00563 EAL domain AMBAS45_07315 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_07315 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_07320 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMBAS45_07330 PF01906 Putative heavy-metal-binding AMBAS45_07335 PF00326 Prolyl oligopeptidase family AMBAS45_07340 PF00375 Sodium:dicarboxylate symporter family AMBAS45_07355 PF01546 Peptidase family M20/M25/M40 AMBAS45_07355 PF07687 Peptidase dimerisation domain AMBAS45_07360 PF03960 ArsC family AMBAS45_07380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBAS45_07385 PF04209 homogentisate 1,2-dioxygenase AMBAS45_07440 PF00091 Tubulin/FtsZ family, GTPase domain AMBAS45_07440 PF12327 FtsZ family, C-terminal domain AMBAS45_07500 PF00271 Helicase conserved C-terminal domain AMBAS45_07500 PF00176 SNF2 family N-terminal domain AMBAS45_07515 PF00271 Helicase conserved C-terminal domain AMBAS45_07515 PF09369 Domain of unknown function (DUF1998) AMBAS45_07515 PF00270 DEAD/DEAH box helicase AMBAS45_07520 PF00580 UvrD/REP helicase N-terminal domain AMBAS45_07520 PF13361 UvrD-like helicase C-terminal domain AMBAS45_07525 PF13185 GAF domain AMBAS45_07525 PF02954 Bacterial regulatory protein, Fis family AMBAS45_07525 PF00158 Sigma-54 interaction domain AMBAS45_07540 PF12592 Protein of unknown function (DUF3763) AMBAS45_07540 PF07728 AAA domain (dynein-related subfamily) AMBAS45_07540 PF17868 AAA lid domain AMBAS45_07545 PF05762 VWA domain containing CoxE-like protein AMBAS45_07595 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_07595 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_07595 PF00563 EAL domain AMBAS45_07600 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_07600 PF00563 EAL domain AMBAS45_07600 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_07605 PF12706 Beta-lactamase superfamily domain AMBAS45_07610 PF00873 AcrB/AcrD/AcrF family AMBAS45_07620 PF00999 Sodium/hydrogen exchanger family AMBAS45_07620 PF02254 TrkA-N domain AMBAS45_07625 PF02525 Flavodoxin-like fold AMBAS45_07640 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMBAS45_07645 PF01799 [2Fe-2S] binding domain AMBAS45_07645 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBAS45_07650 PF01638 HxlR-like helix-turn-helix AMBAS45_07660 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_07660 PF00563 EAL domain AMBAS45_07660 PF13426 PAS domain AMBAS45_07660 PF05231 MASE1 AMBAS45_07660 PF08448 PAS fold AMBAS45_07660 PF08447 PAS fold AMBAS45_07670 PF01979 Amidohydrolase family AMBAS45_07675 PF00576 HIUase/Transthyretin family AMBAS45_07690 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMBAS45_07690 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBAS45_07695 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMBAS45_07695 PF01799 [2Fe-2S] binding domain AMBAS45_07695 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBAS45_07695 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBAS45_07700 PF00440 Bacterial regulatory proteins, tetR family AMBAS45_07700 PF08362 YcdC-like protein, C-terminal region AMBAS45_07715 PF00860 Permease family AMBAS45_07720 PF00962 Adenosine/AMP deaminase AMBAS45_07735 PF00072 Response regulator receiver domain AMBAS45_07735 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_07740 PF09308 LuxQ, periplasmic AMBAS45_07740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_07740 PF00072 Response regulator receiver domain AMBAS45_07740 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_07755 PF00860 Permease family AMBAS45_07770 PF07687 Peptidase dimerisation domain AMBAS45_07770 PF01546 Peptidase family M20/M25/M40 AMBAS45_07775 PF00266 Aminotransferase class-V AMBAS45_07780 PF01925 Sulfite exporter TauE/SafE AMBAS45_07790 PF01425 Amidase AMBAS45_07830 PF03129 Anticodon binding domain AMBAS45_07830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMBAS45_07830 PF02824 TGS domain AMBAS45_07830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMBAS45_07835 PF05198 Translation initiation factor IF-3, N-terminal domain AMBAS45_07835 PF00707 Translation initiation factor IF-3, C-terminal domain AMBAS45_07840 PF01632 Ribosomal protein L35 AMBAS45_07845 PF00453 Ribosomal protein L20 AMBAS45_07850 PF01050 Mannose-6-phosphate isomerase AMBAS45_07850 PF00483 Nucleotidyl transferase AMBAS45_07855 PF02397 Bacterial sugar transferase AMBAS45_07865 PF02563 Polysaccharide biosynthesis/export protein AMBAS45_07865 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AMBAS45_07865 PF10531 SLBB domain AMBAS45_07870 PF13614 AAA domain AMBAS45_07900 PF00563 EAL domain AMBAS45_07900 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_07900 PF08448 PAS fold AMBAS45_07910 PF13439 Glycosyltransferase Family 4 AMBAS45_07910 PF00534 Glycosyl transferases group 1 AMBAS45_07920 PF13477 Glycosyl transferase 4-like AMBAS45_07920 PF00534 Glycosyl transferases group 1 AMBAS45_07925 PF00535 Glycosyl transferase family 2 AMBAS45_07935 PF00535 Glycosyl transferase family 2 AMBAS45_08000 PF00535 Glycosyl transferase family 2 AMBAS45_08010 PF13579 Glycosyl transferase 4-like domain AMBAS45_08010 PF00534 Glycosyl transferases group 1 AMBAS45_08025 PF00535 Glycosyl transferase family 2 AMBAS45_08030 PF01757 Acyltransferase family AMBAS45_08035 PF01757 Acyltransferase family AMBAS45_08045 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMBAS45_08045 PF01409 tRNA synthetases class II core domain (F) AMBAS45_08050 PF03483 B3/4 domain AMBAS45_08050 PF03147 Ferredoxin-fold anticodon binding domain AMBAS45_08050 PF01588 Putative tRNA binding domain AMBAS45_08050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMBAS45_08050 PF03484 tRNA synthetase B5 domain AMBAS45_08055 PF00216 Bacterial DNA-binding protein AMBAS45_08075 PF04073 Aminoacyl-tRNA editing domain AMBAS45_08080 PF01804 Penicillin amidase AMBAS45_08085 PF00933 Glycosyl hydrolase family 3 N terminal domain AMBAS45_08090 PF01923 Cobalamin adenosyltransferase AMBAS45_08100 PF17757 UvrB interaction domain AMBAS45_08100 PF00271 Helicase conserved C-terminal domain AMBAS45_08100 PF00270 DEAD/DEAH box helicase AMBAS45_08100 PF02559 CarD-like/TRCF domain AMBAS45_08100 PF03461 TRCF domain AMBAS45_08110 PF02687 FtsX-like permease family AMBAS45_08110 PF12704 MacB-like periplasmic core domain AMBAS45_08120 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_08120 PF00072 Response regulator receiver domain AMBAS45_08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_08120 PF08448 PAS fold AMBAS45_08120 PF13188 PAS domain AMBAS45_08135 PF03372 Endonuclease/Exonuclease/phosphatase family AMBAS45_08170 PF07690 Major Facilitator Superfamily AMBAS45_08180 PF00483 Nucleotidyl transferase AMBAS45_08200 PF00682 HMGL-like AMBAS45_08205 PF02785 Biotin carboxylase C-terminal domain AMBAS45_08205 PF00289 Biotin carboxylase, N-terminal domain AMBAS45_08205 PF00364 Biotin-requiring enzyme AMBAS45_08205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMBAS45_08210 PF00378 Enoyl-CoA hydratase/isomerase AMBAS45_08215 PF01039 Carboxyl transferase domain AMBAS45_08220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_08220 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_08220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_08225 PF13411 MerR HTH family regulatory protein AMBAS45_08230 PF00108 Thiolase, N-terminal domain AMBAS45_08230 PF02803 Thiolase, C-terminal domain AMBAS45_08240 PF00266 Aminotransferase class-V AMBAS45_08255 PF08411 Exonuclease C-terminal AMBAS45_08255 PF00929 Exonuclease AMBAS45_08260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBAS45_08260 PF00072 Response regulator receiver domain AMBAS45_08260 PF01627 Hpt domain AMBAS45_08260 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_08260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_08260 PF00672 HAMP domain AMBAS45_08265 PF01112 Asparaginase AMBAS45_08275 PF02333 Phytase AMBAS45_08290 PF12833 Helix-turn-helix domain AMBAS45_08290 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AMBAS45_08300 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMBAS45_08300 PF00271 Helicase conserved C-terminal domain AMBAS45_08300 PF04408 Helicase associated domain (HA2) AMBAS45_08300 PF11898 Domain of unknown function (DUF3418) AMBAS45_08300 PF00270 DEAD/DEAH box helicase AMBAS45_08315 PF17785 PUA-like domain AMBAS45_08315 PF10672 S-adenosylmethionine-dependent methyltransferase AMBAS45_08320 PF00698 Acyl transferase domain AMBAS45_08320 PF08240 Alcohol dehydrogenase GroES-like domain AMBAS45_08320 PF16197 Ketoacyl-synthetase C-terminal extension AMBAS45_08320 PF00109 Beta-ketoacyl synthase, N-terminal domain AMBAS45_08320 PF02801 Beta-ketoacyl synthase, C-terminal domain AMBAS45_08320 PF08659 KR domain AMBAS45_08320 PF00550 Phosphopantetheine attachment site AMBAS45_08320 PF14765 Polyketide synthase dehydratase AMBAS45_08325 PF00075 RNase H AMBAS45_08330 PF00929 Exonuclease AMBAS45_08340 PF00563 EAL domain AMBAS45_08340 PF12792 CSS motif domain associated with EAL AMBAS45_08345 PF00005 ABC transporter AMBAS45_08350 PF02687 FtsX-like permease family AMBAS45_08350 PF12704 MacB-like periplasmic core domain AMBAS45_08355 PF00375 Sodium:dicarboxylate symporter family AMBAS45_08365 PF04996 Succinylarginine dihydrolase AMBAS45_08370 PF08272 Topoisomerase I zinc-ribbon-like AMBAS45_08370 PF01131 DNA topoisomerase AMBAS45_08370 PF01751 Toprim domain AMBAS45_08370 PF01396 Topoisomerase DNA binding C4 zinc finger AMBAS45_08375 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AMBAS45_08385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_08385 PF03466 LysR substrate binding domain AMBAS45_08390 PF12804 MobA-like NTP transferase domain AMBAS45_08395 PF02634 FdhD/NarQ family AMBAS45_08400 PF00384 Molybdopterin oxidoreductase AMBAS45_08410 PF02798 Glutathione S-transferase, N-terminal domain AMBAS45_08420 PF03466 LysR substrate binding domain AMBAS45_08420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_08425 PF13673 Acetyltransferase (GNAT) domain AMBAS45_08430 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_08435 PF00072 Response regulator receiver domain AMBAS45_08435 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_08440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_08440 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_08440 PF00989 PAS fold AMBAS45_08440 PF00672 HAMP domain AMBAS45_08440 PF18698 Histidine kinase sensor domain AMBAS45_08450 PF00575 S1 RNA binding domain AMBAS45_08450 PF12111 Polyribonucleotide phosphorylase C terminal AMBAS45_08450 PF10150 Ribonuclease E/G family AMBAS45_08455 PF00849 RNA pseudouridylate synthase AMBAS45_08455 PF01479 S4 domain AMBAS45_08460 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_08465 PF02545 Maf-like protein AMBAS45_08470 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMBAS45_08475 PF01783 Ribosomal L32p protein family AMBAS45_08480 PF02504 Fatty acid synthesis protein AMBAS45_08485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMBAS45_08485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMBAS45_08490 PF00698 Acyl transferase domain AMBAS45_08500 PF00550 Phosphopantetheine attachment site AMBAS45_08505 PF00109 Beta-ketoacyl synthase, N-terminal domain AMBAS45_08505 PF02801 Beta-ketoacyl synthase, C-terminal domain AMBAS45_08510 PF01063 Amino-transferase class IV AMBAS45_08515 PF02618 YceG-like family AMBAS45_08520 PF02223 Thymidylate kinase AMBAS45_08525 PF09115 DNA polymerase III, delta subunit, C terminal AMBAS45_08530 PF01026 TatD related DNase AMBAS45_08535 PF01243 Pyridoxamine 5'-phosphate oxidase AMBAS45_08535 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMBAS45_08540 PF13460 NAD(P)H-binding AMBAS45_08545 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_08545 PF08448 PAS fold AMBAS45_08570 PF00561 alpha/beta hydrolase fold AMBAS45_08575 PF00378 Enoyl-CoA hydratase/isomerase AMBAS45_08575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMBAS45_08575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMBAS45_08580 PF00108 Thiolase, N-terminal domain AMBAS45_08580 PF02803 Thiolase, C-terminal domain AMBAS45_08585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_08585 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMBAS45_08585 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_08585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_08590 PF00561 alpha/beta hydrolase fold AMBAS45_08605 PF04198 Putative sugar-binding domain AMBAS45_08610 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_08620 PF01232 Mannitol dehydrogenase Rossmann domain AMBAS45_08620 PF08125 Mannitol dehydrogenase C-terminal domain AMBAS45_08635 PF01979 Amidohydrolase family AMBAS45_08640 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMBAS45_08640 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMBAS45_08645 PF02913 FAD linked oxidases, C-terminal domain AMBAS45_08645 PF01565 FAD binding domain AMBAS45_08645 PF13183 4Fe-4S dicluster domain AMBAS45_08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_08655 PF03466 LysR substrate binding domain AMBAS45_08660 PF01575 MaoC like domain AMBAS45_08670 PF00924 Mechanosensitive ion channel AMBAS45_08675 PF00593 TonB dependent receptor AMBAS45_08675 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_08680 PF01329 Pterin 4 alpha carbinolamine dehydratase AMBAS45_08695 PF00072 Response regulator receiver domain AMBAS45_08700 PF17384 RimP C-terminal SH3 domain AMBAS45_08700 PF02576 RimP N-terminal domain AMBAS45_08705 PF08529 NusA N-terminal domain AMBAS45_08705 PF00575 S1 RNA binding domain AMBAS45_08705 PF13184 NusA-like KH domain AMBAS45_08710 PF11987 Translation-initiation factor 2 AMBAS45_08710 PF00009 Elongation factor Tu GTP binding domain AMBAS45_08710 PF08364 Bacterial translation initiation factor IF-2 associated region AMBAS45_08710 PF04760 Translation initiation factor IF-2, N-terminal region AMBAS45_08715 PF02033 Ribosome-binding factor A AMBAS45_08720 PF09157 Pseudouridine synthase II TruB, C-terminal AMBAS45_08720 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMBAS45_08720 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMBAS45_08725 PF00312 Ribosomal protein S15 AMBAS45_08730 PF00563 EAL domain AMBAS45_08730 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_08730 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_08735 PF00849 RNA pseudouridylate synthase AMBAS45_08735 PF01479 S4 domain AMBAS45_08745 PF00795 Carbon-nitrogen hydrolase AMBAS45_08745 PF00583 Acetyltransferase (GNAT) family AMBAS45_08780 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMBAS45_08780 PF00578 AhpC/TSA family AMBAS45_08785 PF13192 Thioredoxin domain AMBAS45_08785 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_08790 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_08790 PF00593 TonB dependent receptor AMBAS45_08825 PF11842 Domain of unknown function (DUF3362) AMBAS45_08825 PF04055 Radical SAM superfamily AMBAS45_08825 PF08497 Radical SAM N-terminal AMBAS45_08840 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_08840 PF00593 TonB dependent receptor AMBAS45_08845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMBAS45_08845 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_08855 PF13416 Bacterial extracellular solute-binding protein AMBAS45_08865 PF00005 ABC transporter AMBAS45_08870 PF01066 CDP-alcohol phosphatidyltransferase AMBAS45_08880 PF01223 DNA/RNA non-specific endonuclease AMBAS45_08890 PF00360 Phytochrome region AMBAS45_08890 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_08890 PF01590 GAF domain AMBAS45_08890 PF00563 EAL domain AMBAS45_08915 PF03466 LysR substrate binding domain AMBAS45_08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_08920 PF02525 Flavodoxin-like fold AMBAS45_08940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_08940 PF03466 LysR substrate binding domain AMBAS45_08945 PF00593 TonB dependent receptor AMBAS45_08945 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_08960 PF00005 ABC transporter AMBAS45_08965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBAS45_08970 PF01668 SmpB protein AMBAS45_08975 PF03364 Polyketide cyclase / dehydrase and lipid transport AMBAS45_08980 PF03658 RnfH family Ubiquitin AMBAS45_08990 PF02028 BCCT, betaine/carnitine/choline family transporter AMBAS45_08995 PF00593 TonB dependent receptor AMBAS45_08995 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_09000 PF13181 Tetratricopeptide repeat AMBAS45_09015 PF03618 Kinase/pyrophosphorylase AMBAS45_09020 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMBAS45_09020 PF02896 PEP-utilising enzyme, TIM barrel domain AMBAS45_09020 PF00391 PEP-utilising enzyme, mobile domain AMBAS45_09030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMBAS45_09035 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBAS45_09035 PF01799 [2Fe-2S] binding domain AMBAS45_09055 PF08007 Cupin superfamily protein AMBAS45_09060 PF00211 Adenylate and Guanylate cyclase catalytic domain AMBAS45_09065 PF08328 Adenylosuccinate lyase C-terminal AMBAS45_09065 PF00206 Lyase AMBAS45_09070 PF04356 Protein of unknown function (DUF489) AMBAS45_09080 PF00849 RNA pseudouridylate synthase AMBAS45_09085 PF03971 Monomeric isocitrate dehydrogenase AMBAS45_09090 PF00313 'Cold-shock' DNA-binding domain AMBAS45_09095 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMBAS45_09100 PF10431 C-terminal, D2-small domain, of ClpB protein AMBAS45_09100 PF02861 Clp amino terminal domain, pathogenicity island component AMBAS45_09100 PF00004 ATPase family associated with various cellular activities (AAA) AMBAS45_09100 PF07724 AAA domain (Cdc48 subfamily) AMBAS45_09100 PF17871 AAA lid domain AMBAS45_09105 PF01176 Translation initiation factor 1A / IF-1 AMBAS45_09110 PF04377 Arginine-tRNA-protein transferase, C terminus AMBAS45_09110 PF04376 Arginine-tRNA-protein transferase, N terminus AMBAS45_09115 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMBAS45_09120 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_09125 PF04217 Protein of unknown function, DUF412 AMBAS45_09130 PF17283 SprT-like zinc ribbon domain AMBAS45_09130 PF10263 SprT-like family AMBAS45_09135 PF01343 Peptidase family S49 AMBAS45_09150 PF00881 Nitroreductase family AMBAS45_09160 PF00710 Asparaginase, N-terminal AMBAS45_09160 PF17763 Glutaminase/Asparaginase C-terminal domain AMBAS45_09165 PF04055 Radical SAM superfamily AMBAS45_09165 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMBAS45_09170 PF03099 Biotin/lipoate A/B protein ligase family AMBAS45_09175 PF04359 Protein of unknown function (DUF493) AMBAS45_09180 PF00768 D-alanyl-D-alanine carboxypeptidase AMBAS45_09180 PF07943 Penicillin-binding protein 5, C-terminal domain AMBAS45_09185 PF05036 Sporulation related domain AMBAS45_09185 PF03330 Lytic transglycolase AMBAS45_09190 PF01098 Cell cycle protein AMBAS45_09195 PF00905 Penicillin binding protein transpeptidase domain AMBAS45_09195 PF03717 Penicillin-binding Protein dimerisation domain AMBAS45_09200 PF02590 Predicted SPOUT methyltransferase AMBAS45_09210 PF01467 Cytidylyltransferase-like AMBAS45_09215 PF06144 DNA polymerase III, delta subunit AMBAS45_09215 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AMBAS45_09220 PF04390 Lipopolysaccharide-assembly AMBAS45_09225 PF08264 Anticodon-binding domain of tRNA AMBAS45_09225 PF00133 tRNA synthetases class I (I, L, M and V) AMBAS45_09225 PF13603 Leucyl-tRNA synthetase, Domain 2 AMBAS45_09235 PF13654 AAA domain AMBAS45_09235 PF05362 Lon protease (S16) C-terminal proteolytic domain AMBAS45_09250 PF00106 short chain dehydrogenase AMBAS45_09255 PF01985 CRS1 / YhbY (CRM) domain AMBAS45_09260 PF01728 FtsJ-like methyltransferase AMBAS45_09265 PF06480 FtsH Extracellular AMBAS45_09265 PF01434 Peptidase family M41 AMBAS45_09265 PF00004 ATPase family associated with various cellular activities (AAA) AMBAS45_09265 PF17862 AAA+ lid domain AMBAS45_09270 PF00809 Pterin binding enzyme AMBAS45_09275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMBAS45_09275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMBAS45_09275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMBAS45_09275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMBAS45_09280 PF00121 Triosephosphate isomerase AMBAS45_09285 PF03840 Preprotein translocase SecG subunit AMBAS45_09290 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_09290 PF00563 EAL domain AMBAS45_09290 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_09295 PF01679 Proteolipid membrane potential modulator AMBAS45_09305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMBAS45_09305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBAS45_09310 PF02142 MGS-like domain AMBAS45_09310 PF00781 Diacylglycerol kinase catalytic domain AMBAS45_09340 PF00474 Sodium:solute symporter family AMBAS45_09365 PF00013 KH domain AMBAS45_09365 PF00575 S1 RNA binding domain AMBAS45_09365 PF03725 3' exoribonuclease family, domain 2 AMBAS45_09365 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMBAS45_09365 PF01138 3' exoribonuclease family, domain 1 AMBAS45_09490 PF03544 Gram-negative bacterial TonB protein C-terminal AMBAS45_09510 PF07719 Tetratricopeptide repeat AMBAS45_09510 PF13181 Tetratricopeptide repeat AMBAS45_09525 PF06470 SMC proteins Flexible Hinge Domain AMBAS45_09525 PF02463 RecF/RecN/SMC N terminal domain AMBAS45_09530 PF04354 ZipA, C-terminal FtsZ-binding domain AMBAS45_09535 PF00533 BRCA1 C Terminus (BRCT) domain AMBAS45_09535 PF01653 NAD-dependent DNA ligase adenylation domain AMBAS45_09535 PF12826 Helix-hairpin-helix motif AMBAS45_09535 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMBAS45_09535 PF03120 NAD-dependent DNA ligase OB-fold domain AMBAS45_09555 PF00664 ABC transporter transmembrane region AMBAS45_09555 PF00005 ABC transporter AMBAS45_09560 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMBAS45_09565 PF03966 Trm112p-like protein AMBAS45_09570 PF02348 Cytidylyltransferase AMBAS45_09585 PF04055 Radical SAM superfamily AMBAS45_09585 PF00919 Uncharacterized protein family UPF0004 AMBAS45_09585 PF18693 TRAM domain AMBAS45_09600 PF00899 ThiF family AMBAS45_09605 PF13409 Glutathione S-transferase, N-terminal domain AMBAS45_09610 PF05726 Pirin C-terminal cupin domain AMBAS45_09610 PF02678 Pirin AMBAS45_09620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMBAS45_09620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMBAS45_09620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMBAS45_09620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMBAS45_09625 PF02371 Transposase IS116/IS110/IS902 family AMBAS45_09625 PF01548 Transposase AMBAS45_09635 PF00285 Citrate synthase, C-terminal domain AMBAS45_09640 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMBAS45_09645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMBAS45_09650 PF02910 Fumarate reductase flavoprotein C-term AMBAS45_09650 PF00890 FAD binding domain AMBAS45_09655 PF13085 2Fe-2S iron-sulfur cluster binding domain AMBAS45_09660 PF02779 Transketolase, pyrimidine binding domain AMBAS45_09660 PF16870 2-oxoglutarate dehydrogenase C-terminal AMBAS45_09660 PF00676 Dehydrogenase E1 component AMBAS45_09660 PF16078 2-oxoglutarate dehydrogenase N-terminus AMBAS45_09665 PF00364 Biotin-requiring enzyme AMBAS45_09665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMBAS45_09665 PF02817 e3 binding domain AMBAS45_09670 PF08442 ATP-grasp domain AMBAS45_09670 PF00549 CoA-ligase AMBAS45_09675 PF02629 CoA binding domain AMBAS45_09675 PF00549 CoA-ligase AMBAS45_09685 PF04820 Tryptophan halogenase AMBAS45_09695 PF18494 Pullulanase Ins domain AMBAS45_09695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMBAS45_09695 PF03714 Bacterial pullanase-associated domain AMBAS45_09695 PF17967 Pullulanase N2 domain AMBAS45_09695 PF11852 Domain of unknown function (DUF3372) AMBAS45_09700 PF01734 Patatin-like phospholipase AMBAS45_09715 PF16657 Maltogenic Amylase, C-terminal domain AMBAS45_09715 PF00128 Alpha amylase, catalytic domain AMBAS45_09715 PF02903 Alpha amylase, N-terminal ig-like domain AMBAS45_09720 PF00128 Alpha amylase, catalytic domain AMBAS45_09720 PF09087 Cyclomaltodextrinase, N-terminal AMBAS45_09720 PF10438 Cyclo-malto-dextrinase C-terminal domain AMBAS45_09730 PF01373 Glycosyl hydrolase family 14 AMBAS45_09730 PF03423 Carbohydrate binding domain (family 25) AMBAS45_09730 PF00128 Alpha amylase, catalytic domain AMBAS45_09735 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_09740 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMBAS45_09740 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMBAS45_09745 PF00106 short chain dehydrogenase AMBAS45_09750 PF12262 Bacterial virulence factor lipase N-terminal AMBAS45_09755 PF01804 Penicillin amidase AMBAS45_09760 PF01343 Peptidase family S49 AMBAS45_09760 PF08496 Peptidase family S49 N-terminal AMBAS45_09775 PF01784 NIF3 (NGG1p interacting factor 3) AMBAS45_09785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBAS45_09785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMBAS45_09790 PF00255 Glutathione peroxidase AMBAS45_09795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMBAS45_09795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMBAS45_09805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_09805 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_09805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_09810 PF00378 Enoyl-CoA hydratase/isomerase AMBAS45_09815 PF13847 Methyltransferase domain AMBAS45_09825 PF00884 Sulfatase AMBAS45_09825 PF11893 Domain of unknown function (DUF3413) AMBAS45_09830 PF07208 Protein of unknown function (DUF1414) AMBAS45_09835 PF04245 37-kD nucleoid-associated bacterial protein AMBAS45_09845 PF01464 Transglycosylase SLT domain AMBAS45_09845 PF10145 Phage-related minor tail protein AMBAS45_09845 PF01551 Peptidase family M23 AMBAS45_09865 PF06580 Histidine kinase AMBAS45_09865 PF07694 5TMR of 5TMR-LYT AMBAS45_09870 PF04397 LytTr DNA-binding domain AMBAS45_09870 PF00072 Response regulator receiver domain AMBAS45_09875 PF00365 Phosphofructokinase AMBAS45_09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_09885 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_09885 PF00072 Response regulator receiver domain AMBAS45_09885 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBAS45_09885 PF01627 Hpt domain AMBAS45_09885 PF00989 PAS fold AMBAS45_09915 PF00271 Helicase conserved C-terminal domain AMBAS45_09915 PF00270 DEAD/DEAH box helicase AMBAS45_09920 PF01144 Coenzyme A transferase AMBAS45_09925 PF01144 Coenzyme A transferase AMBAS45_09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_09930 PF03466 LysR substrate binding domain AMBAS45_09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_09945 PF03466 LysR substrate binding domain AMBAS45_09950 PF03315 Serine dehydratase beta chain AMBAS45_09950 PF03313 Serine dehydratase alpha chain AMBAS45_09955 PF00293 NUDIX domain AMBAS45_09960 PF04715 Anthranilate synthase component I, N terminal region AMBAS45_09960 PF00425 chorismate binding enzyme AMBAS45_09970 PF02646 RmuC family AMBAS45_09975 PF00082 Subtilase family AMBAS45_09975 PF02225 PA domain AMBAS45_09975 PF05922 Peptidase inhibitor I9 AMBAS45_09975 PF13860 FlgD Ig-like domain AMBAS45_09980 PF00676 Dehydrogenase E1 component AMBAS45_09985 PF02779 Transketolase, pyrimidine binding domain AMBAS45_09985 PF02780 Transketolase, C-terminal domain AMBAS45_09990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMBAS45_09990 PF02817 e3 binding domain AMBAS45_09990 PF00364 Biotin-requiring enzyme AMBAS45_09995 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AMBAS45_10000 PF00069 Protein kinase domain AMBAS45_10010 PF00132 Bacterial transferase hexapeptide (six repeats) AMBAS45_10015 PF00266 Aminotransferase class-V AMBAS45_10025 PF13185 GAF domain AMBAS45_10035 PF17516 ProQ C-terminal domain AMBAS45_10035 PF04352 ProQ/FINO family AMBAS45_10040 PF11818 C-terminal domain of tail specific protease (DUF3340) AMBAS45_10040 PF00595 PDZ domain AMBAS45_10040 PF03572 Peptidase family S41 AMBAS45_10040 PF17804 Tail specific protease N-terminal domain AMBAS45_10045 PF00209 Sodium:neurotransmitter symporter family AMBAS45_10055 PF11940 Domain of unknown function (DUF3458) Ig-like fold AMBAS45_10055 PF01433 Peptidase family M1 domain AMBAS45_10055 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AMBAS45_10070 PF07044 Protein of unknown function (DUF1329) AMBAS45_10085 PF05088 Bacterial NAD-glutamate dehydrogenase AMBAS45_10090 PF01180 Dihydroorotate dehydrogenase AMBAS45_10095 PF02926 THUMP domain AMBAS45_10095 PF10672 S-adenosylmethionine-dependent methyltransferase AMBAS45_10095 PF01170 Putative RNA methylase family UPF0020 AMBAS45_10115 PF04957 Ribosome modulation factor AMBAS45_10120 PF07977 FabA-like domain AMBAS45_10130 PF00875 DNA photolyase AMBAS45_10130 PF03441 FAD binding domain of DNA photolyase AMBAS45_10150 PF13545 Crp-like helix-turn-helix domain AMBAS45_10150 PF00027 Cyclic nucleotide-binding domain AMBAS45_10165 PF00403 Heavy-metal-associated domain AMBAS45_10175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMBAS45_10175 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AMBAS45_10190 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMBAS45_10200 PF00210 Ferritin-like domain AMBAS45_10205 PF00210 Ferritin-like domain AMBAS45_10210 PF00999 Sodium/hydrogen exchanger family AMBAS45_10215 PF01645 Conserved region in glutamate synthase AMBAS45_10225 PF00582 Universal stress protein family AMBAS45_10230 PF01219 Prokaryotic diacylglycerol kinase AMBAS45_10290 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMBAS45_10295 PF00875 DNA photolyase AMBAS45_10295 PF03441 FAD binding domain of DNA photolyase AMBAS45_10305 PF00582 Universal stress protein family AMBAS45_10310 PF01171 PP-loop family AMBAS45_10315 PF01734 Patatin-like phospholipase AMBAS45_10335 PF01810 LysE type translocator AMBAS45_10340 PF02146 Sir2 family AMBAS45_10345 PF00581 Rhodanese-like domain AMBAS45_10350 PF08534 Redoxin AMBAS45_10360 PF01066 CDP-alcohol phosphatidyltransferase AMBAS45_10365 PF08459 UvrC Helix-hairpin-helix N-terminal AMBAS45_10365 PF02151 UvrB/uvrC motif AMBAS45_10365 PF01541 GIY-YIG catalytic domain AMBAS45_10370 PF00072 Response regulator receiver domain AMBAS45_10370 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_10375 PF17954 Quercetinase C-terminal cupin domain AMBAS45_10375 PF02678 Pirin AMBAS45_10385 PF03781 Sulfatase-modifying factor enzyme 1 AMBAS45_10385 PF12867 DinB superfamily AMBAS45_10390 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMBAS45_10395 PF07681 DoxX AMBAS45_10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_10400 PF03466 LysR substrate binding domain AMBAS45_10410 PF01027 Inhibitor of apoptosis-promoting Bax1 AMBAS45_10415 PF02635 DsrE/DsrF-like family AMBAS45_10420 PF02635 DsrE/DsrF-like family AMBAS45_10430 PF04358 DsrC like protein AMBAS45_10460 PF00593 TonB dependent receptor AMBAS45_10460 PF00593 TonB dependent receptor AMBAS45_10460 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_10460 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_10465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMBAS45_10465 PF02403 Seryl-tRNA synthetase N-terminal domain AMBAS45_10470 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMBAS45_10475 PF12002 MgsA AAA+ ATPase C terminal AMBAS45_10475 PF16193 AAA C-terminal domain AMBAS45_10475 PF00004 ATPase family associated with various cellular activities (AAA) AMBAS45_10480 PF03548 Outer membrane lipoprotein carrier protein LolA AMBAS45_10485 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMBAS45_10485 PF17854 FtsK alpha domain AMBAS45_10485 PF09397 Ftsk gamma domain AMBAS45_10485 PF01580 FtsK/SpoIIIE family AMBAS45_10490 PF01037 Lrp/AsnC ligand binding domain AMBAS45_10495 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMBAS45_10495 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMBAS45_10500 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMBAS45_10505 PF18073 Rubredoxin metal binding domain AMBAS45_10520 PF00216 Bacterial DNA-binding protein AMBAS45_10525 PF00575 S1 RNA binding domain AMBAS45_10530 PF02224 Cytidylate kinase AMBAS45_10535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMBAS45_10540 PF00266 Aminotransferase class-V AMBAS45_10545 PF00521 DNA gyrase/topoisomerase IV, subunit A AMBAS45_10545 PF03989 DNA gyrase C-terminal domain, beta-propeller AMBAS45_10555 PF03477 ATP cone domain AMBAS45_10555 PF02867 Ribonucleotide reductase, barrel domain AMBAS45_10555 PF00317 Ribonucleotide reductase, all-alpha domain AMBAS45_10560 PF00268 Ribonucleotide reductase, small chain AMBAS45_10565 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBAS45_10570 PF00106 short chain dehydrogenase AMBAS45_10585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBAS45_10585 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_10590 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_10590 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_10590 PF00563 EAL domain AMBAS45_10595 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_10595 PF00072 Response regulator receiver domain AMBAS45_10600 PF00892 EamA-like transporter family AMBAS45_10605 PF01259 SAICAR synthetase AMBAS45_10610 PF06804 NlpB/DapX lipoprotein AMBAS45_10615 PF00701 Dihydrodipicolinate synthetase family AMBAS45_10625 PF00578 AhpC/TSA family AMBAS45_10630 PF01594 AI-2E family transporter AMBAS45_10635 PF01435 Peptidase family M48 AMBAS45_10640 PF00578 AhpC/TSA family AMBAS45_10645 PF03960 ArsC family AMBAS45_10650 PF03358 NADPH-dependent FMN reductase AMBAS45_10665 PF00308 Bacterial dnaA protein AMBAS45_10675 PF00586 AIR synthase related protein, N-terminal domain AMBAS45_10675 PF02769 AIR synthase related protein, C-terminal domain AMBAS45_10680 PF00551 Formyl transferase AMBAS45_10690 PF09317 Domain of unknown function (DUF1974) AMBAS45_10690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_10690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_10690 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_10700 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_10700 PF00072 Response regulator receiver domain AMBAS45_10705 PF13649 Methyltransferase domain AMBAS45_10710 PF08003 Protein of unknown function (DUF1698) AMBAS45_10715 PF00485 Phosphoribulokinase / Uridine kinase family AMBAS45_10730 PF00128 Alpha amylase, catalytic domain AMBAS45_10735 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_10740 PF00994 Probable molybdopterin binding domain AMBAS45_10740 PF03453 MoeA N-terminal region (domain I and II) AMBAS45_10740 PF03454 MoeA C-terminal region (domain IV) AMBAS45_10745 PF01554 MatE AMBAS45_10760 PF07724 AAA domain (Cdc48 subfamily) AMBAS45_10760 PF06689 ClpX C4-type zinc finger AMBAS45_10760 PF10431 C-terminal, D2-small domain, of ClpB protein AMBAS45_10765 PF00291 Pyridoxal-phosphate dependent enzyme AMBAS45_10895 PF04134 Protein of unknown function, DUF393 AMBAS45_10900 PF01810 LysE type translocator AMBAS45_10910 PF03544 Gram-negative bacterial TonB protein C-terminal AMBAS45_10970 PF02567 Phenazine biosynthesis-like protein AMBAS45_10980 PF00378 Enoyl-CoA hydratase/isomerase AMBAS45_10995 PF00255 Glutathione peroxidase AMBAS45_11000 PF02525 Flavodoxin-like fold AMBAS45_11010 PF01053 Cys/Met metabolism PLP-dependent enzyme AMBAS45_11025 PF00155 Aminotransferase class I and II AMBAS45_11030 PF10459 Peptidase S46 AMBAS45_11040 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AMBAS45_11055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_11055 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_11055 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMBAS45_11055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_11060 PF12833 Helix-turn-helix domain AMBAS45_11060 PF07883 Cupin domain AMBAS45_11065 PF00593 TonB dependent receptor AMBAS45_11065 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_11080 PF00326 Prolyl oligopeptidase family AMBAS45_11080 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMBAS45_11085 PF00873 AcrB/AcrD/AcrF family AMBAS45_11090 PF13533 Biotin-lipoyl like AMBAS45_11100 PF00766 Electron transfer flavoprotein FAD-binding domain AMBAS45_11100 PF01012 Electron transfer flavoprotein domain AMBAS45_11105 PF01012 Electron transfer flavoprotein domain AMBAS45_11115 PF00816 H-NS histone family AMBAS45_11120 PF00561 alpha/beta hydrolase fold AMBAS45_11130 PF00258 Flavodoxin AMBAS45_11155 PF00593 TonB dependent receptor AMBAS45_11155 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_11160 PF00672 HAMP domain AMBAS45_11160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_11165 PF01475 Ferric uptake regulator family AMBAS45_11170 PF01063 Amino-transferase class IV AMBAS45_11175 PF02626 Carboxyltransferase domain, subdomain A and B AMBAS45_11180 PF02682 Carboxyltransferase domain, subdomain C and D AMBAS45_11185 PF03746 LamB/YcsF family AMBAS45_11190 PF17783 CvfB-like winged helix domain AMBAS45_11190 PF13509 S1 domain AMBAS45_11195 PF02566 OsmC-like protein AMBAS45_11200 PF13533 Biotin-lipoyl like AMBAS45_11205 PF00873 AcrB/AcrD/AcrF family AMBAS45_11210 PF00873 AcrB/AcrD/AcrF family AMBAS45_11225 PF00155 Aminotransferase class I and II AMBAS45_11235 PF13286 Phosphohydrolase-associated domain AMBAS45_11235 PF01966 HD domain AMBAS45_11245 PF00174 Oxidoreductase molybdopterin binding domain AMBAS45_11250 PF01794 Ferric reductase like transmembrane component AMBAS45_11265 PF02810 SEC-C motif AMBAS45_11270 PF00128 Alpha amylase, catalytic domain AMBAS45_11275 PF08240 Alcohol dehydrogenase GroES-like domain AMBAS45_11275 PF00107 Zinc-binding dehydrogenase AMBAS45_11285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_11285 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_11285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_11295 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_11295 PF00593 TonB dependent receptor AMBAS45_11315 PF06969 HemN C-terminal domain AMBAS45_11315 PF04055 Radical SAM superfamily AMBAS45_11320 PF00005 ABC transporter AMBAS45_11320 PF03459 TOBE domain AMBAS45_11325 PF00528 Binding-protein-dependent transport system inner membrane component AMBAS45_11335 PF02391 MoaE protein AMBAS45_11340 PF02597 ThiS family AMBAS45_11345 PF01967 MoaC family AMBAS45_11350 PF00994 Probable molybdopterin binding domain AMBAS45_11355 PF00899 ThiF family AMBAS45_11380 PF00376 MerR family regulatory protein AMBAS45_11380 PF09278 MerR, DNA binding AMBAS45_11385 PF02411 MerT mercuric transport protein AMBAS45_11390 PF00403 Heavy-metal-associated domain AMBAS45_11400 PF13411 MerR HTH family regulatory protein AMBAS45_11415 PF16916 Dimerisation domain of Zinc Transporter AMBAS45_11415 PF01545 Cation efflux family AMBAS45_11430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_11430 PF00529 HlyD membrane-fusion protein of T1SS AMBAS45_11435 PF00873 AcrB/AcrD/AcrF family AMBAS45_11440 PF00579 tRNA synthetases class I (W and Y) AMBAS45_11480 PF00037 4Fe-4S binding domain AMBAS45_11490 PF03435 Saccharopine dehydrogenase NADP binding domain AMBAS45_11495 PF00155 Aminotransferase class I and II AMBAS45_11510 PF01717 Cobalamin-independent synthase, Catalytic domain AMBAS45_11510 PF08267 Cobalamin-independent synthase, N-terminal domain AMBAS45_11515 PF00593 TonB dependent receptor AMBAS45_11515 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_11525 PF00892 EamA-like transporter family AMBAS45_11535 PF02245 Methylpurine-DNA glycosylase (MPG) AMBAS45_11550 PF01810 LysE type translocator AMBAS45_11555 PF00155 Aminotransferase class I and II AMBAS45_11555 PF00392 Bacterial regulatory proteins, gntR family AMBAS45_11565 PF13538 UvrD-like helicase C-terminal domain AMBAS45_11570 PF00580 UvrD/REP helicase N-terminal domain AMBAS45_11570 PF13361 UvrD-like helicase C-terminal domain AMBAS45_11570 PF12705 PD-(D/E)XK nuclease superfamily AMBAS45_11575 PF17946 RecC C-terminal domain AMBAS45_11585 PF00501 AMP-binding enzyme AMBAS45_11595 PF00563 EAL domain AMBAS45_11595 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_11595 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_11600 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMBAS45_11600 PF17770 Ribonuclease J C-terminal domain AMBAS45_11600 PF12706 Beta-lactamase superfamily domain AMBAS45_11615 PF03466 LysR substrate binding domain AMBAS45_11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_11635 PF01022 Bacterial regulatory protein, arsR family AMBAS45_11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_11645 PF03466 LysR substrate binding domain AMBAS45_11655 PF00072 Response regulator receiver domain AMBAS45_11655 PF00158 Sigma-54 interaction domain AMBAS45_11655 PF02954 Bacterial regulatory protein, Fis family AMBAS45_11665 PF08446 PAS fold AMBAS45_11665 PF01590 GAF domain AMBAS45_11665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_11665 PF00360 Phytochrome region AMBAS45_11665 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_11670 PF00072 Response regulator receiver domain AMBAS45_11675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_11675 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_11675 PF09308 LuxQ, periplasmic AMBAS45_11675 PF00072 Response regulator receiver domain AMBAS45_11710 PF07043 Protein of unknown function (DUF1328) AMBAS45_11730 PF07023 Protein of unknown function (DUF1315) AMBAS45_11740 PF01235 Sodium:alanine symporter family AMBAS45_11745 PF00246 Zinc carboxypeptidase AMBAS45_11745 PF18027 Cytosolic carboxypeptidase N-terminal domain AMBAS45_11750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMBAS45_11750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBAS45_11760 PF01641 SelR domain AMBAS45_11765 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMBAS45_11765 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMBAS45_11770 PF00128 Alpha amylase, catalytic domain AMBAS45_11770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMBAS45_11775 PF00128 Alpha amylase, catalytic domain AMBAS45_11775 PF02806 Alpha amylase, C-terminal all-beta domain AMBAS45_11775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMBAS45_11780 PF02446 4-alpha-glucanotransferase AMBAS45_11785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBAS45_11785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMBAS45_11790 PF01263 Aldose 1-epimerase AMBAS45_11795 PF01081 KDPG and KHG aldolase AMBAS45_11800 PF02685 Glucokinase AMBAS45_11805 PF00920 Dehydratase family AMBAS45_11810 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMBAS45_11815 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMBAS45_11815 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMBAS45_11820 PF01380 SIS domain AMBAS45_11820 PF01418 Helix-turn-helix domain, rpiR family AMBAS45_11825 PF00224 Pyruvate kinase, barrel domain AMBAS45_11825 PF02887 Pyruvate kinase, alpha/beta domain AMBAS45_11830 PF01048 Phosphorylase superfamily AMBAS45_11850 PF04972 BON domain AMBAS45_11890 PF04962 KduI/IolB family AMBAS45_11895 PF03480 Bacterial extracellular solute-binding protein, family 7 AMBAS45_11900 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMBAS45_11905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMBAS45_11910 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_11915 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AMBAS45_11915 PF08666 SAF domain AMBAS45_11920 PF02614 Glucuronate isomerase AMBAS45_11925 PF01232 Mannitol dehydrogenase Rossmann domain AMBAS45_11925 PF08125 Mannitol dehydrogenase C-terminal domain AMBAS45_11930 PF01081 KDPG and KHG aldolase AMBAS45_11935 PF00294 pfkB family carbohydrate kinase AMBAS45_11940 PF13472 GDSL-like Lipase/Acylhydrolase family AMBAS45_11950 PF07470 Glycosyl Hydrolase Family 88 AMBAS45_11955 PF00295 Glycosyl hydrolases family 28 AMBAS45_11960 PF01095 Pectinesterase AMBAS45_11965 PF00672 HAMP domain AMBAS45_11965 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_11965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_11965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBAS45_11965 PF00072 Response regulator receiver domain AMBAS45_11965 PF01627 Hpt domain AMBAS45_11980 PF04231 Endonuclease I AMBAS45_11985 PF01433 Peptidase family M1 domain AMBAS45_11985 PF11838 ERAP1-like C-terminal domain AMBAS45_11990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_11990 PF00672 HAMP domain AMBAS45_11990 PF02743 Cache domain AMBAS45_12005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_12005 PF03466 LysR substrate binding domain AMBAS45_12010 PF01965 DJ-1/PfpI family AMBAS45_12015 PF00465 Iron-containing alcohol dehydrogenase AMBAS45_12020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBAS45_12025 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_12025 PF00563 EAL domain AMBAS45_12025 PF01590 GAF domain AMBAS45_12025 PF00360 Phytochrome region AMBAS45_12035 PF06628 Catalase-related immune-responsive AMBAS45_12035 PF00199 Catalase AMBAS45_12040 PF11849 Domain of unknown function (DUF3369) AMBAS45_12045 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_12045 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBAS45_12050 PF12697 Alpha/beta hydrolase family AMBAS45_12075 PF12833 Helix-turn-helix domain AMBAS45_12080 PF00939 Sodium:sulfate symporter transmembrane region AMBAS45_12085 PF00692 dUTPase AMBAS45_12090 PF10609 NUBPL iron-transfer P-loop NTPase AMBAS45_12095 PF01588 Putative tRNA binding domain AMBAS45_12095 PF08264 Anticodon-binding domain of tRNA AMBAS45_12095 PF09334 tRNA synthetases class I (M) AMBAS45_12100 PF00924 Mechanosensitive ion channel AMBAS45_12100 PF05552 Conserved TM helix AMBAS45_12105 PF08241 Methyltransferase domain AMBAS45_12110 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMBAS45_12110 PF00753 Metallo-beta-lactamase superfamily AMBAS45_12115 PF01476 LysM domain AMBAS45_12115 PF01464 Transglycosylase SLT domain AMBAS45_12125 PF09190 DALR domain AMBAS45_12125 PF01406 tRNA synthetases class I (C) catalytic domain AMBAS45_12130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMBAS45_12135 PF00149 Calcineurin-like phosphoesterase AMBAS45_12145 PF15975 Flotillin AMBAS45_12145 PF01145 SPFH domain / Band 7 family AMBAS45_12160 PF00128 Alpha amylase, catalytic domain AMBAS45_12165 PF01638 HxlR-like helix-turn-helix AMBAS45_12170 PF00107 Zinc-binding dehydrogenase AMBAS45_12170 PF08240 Alcohol dehydrogenase GroES-like domain AMBAS45_12175 PF08240 Alcohol dehydrogenase GroES-like domain AMBAS45_12175 PF00107 Zinc-binding dehydrogenase AMBAS45_12180 PF03466 LysR substrate binding domain AMBAS45_12180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_12205 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AMBAS45_12215 PF00156 Phosphoribosyl transferase domain AMBAS45_12220 PF02674 Colicin V production protein AMBAS45_12225 PF05036 Sporulation related domain AMBAS45_12230 PF02875 Mur ligase family, glutamate ligase domain AMBAS45_12230 PF08245 Mur ligase middle domain AMBAS45_12235 PF01039 Carboxyl transferase domain AMBAS45_12235 PF17848 Acetyl-coA carboxylase zinc finger domain AMBAS45_12240 PF01416 tRNA pseudouridine synthase AMBAS45_12250 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMBAS45_12250 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMBAS45_12255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMBAS45_12255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBAS45_12255 PF11890 Domain of unknown function (DUF3410) AMBAS45_12260 PF00596 Class II Aldolase and Adducin N-terminal domain AMBAS45_12275 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AMBAS45_12280 PF02801 Beta-ketoacyl synthase, C-terminal domain AMBAS45_12280 PF00109 Beta-ketoacyl synthase, N-terminal domain AMBAS45_12285 PF13193 AMP-binding enzyme C-terminal domain AMBAS45_12285 PF00501 AMP-binding enzyme AMBAS45_12295 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMBAS45_12295 PF01266 FAD dependent oxidoreductase AMBAS45_12340 PF13411 MerR HTH family regulatory protein AMBAS45_12350 PF00005 ABC transporter AMBAS45_12360 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMBAS45_12360 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMBAS45_12370 PF02667 Short chain fatty acid transporter AMBAS45_12375 PF00072 Response regulator receiver domain AMBAS45_12375 PF01627 Hpt domain AMBAS45_12375 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_12375 PF00672 HAMP domain AMBAS45_12375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBAS45_12380 PF00675 Insulinase (Peptidase family M16) AMBAS45_12380 PF05193 Peptidase M16 inactive domain AMBAS45_12395 PF04315 Elongation factor P hydroxylase AMBAS45_12425 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_12425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBAS45_12430 PF00378 Enoyl-CoA hydratase/isomerase AMBAS45_12435 PF02909 Tetracyclin repressor-like, C-terminal domain AMBAS45_12435 PF00440 Bacterial regulatory proteins, tetR family AMBAS45_12440 PF00732 GMC oxidoreductase AMBAS45_12440 PF05199 GMC oxidoreductase AMBAS45_12450 PF06974 Protein of unknown function (DUF1298) AMBAS45_12450 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AMBAS45_12455 PF08361 MAATS-type transcriptional repressor, C-terminal region AMBAS45_12455 PF00440 Bacterial regulatory proteins, tetR family AMBAS45_12460 PF04286 Protein of unknown function (DUF445) AMBAS45_12485 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMBAS45_12485 PF00326 Prolyl oligopeptidase family AMBAS45_12490 PF07840 FadR C-terminal domain AMBAS45_12490 PF00392 Bacterial regulatory proteins, gntR family AMBAS45_12495 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AMBAS45_12500 PF02600 Disulfide bond formation protein DsbB AMBAS45_12505 PF13302 Acetyltransferase (GNAT) domain AMBAS45_12510 PF03692 Putative zinc- or iron-chelating domain AMBAS45_12515 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMBAS45_12525 PF05166 YcgL domain AMBAS45_12530 PF01612 3'-5' exonuclease AMBAS45_12530 PF00570 HRDC domain AMBAS45_12535 PF13193 AMP-binding enzyme C-terminal domain AMBAS45_12535 PF00501 AMP-binding enzyme AMBAS45_12540 PF12697 Alpha/beta hydrolase family AMBAS45_12555 PF00814 Glycoprotease family AMBAS45_12560 PF06733 DEAD_2 AMBAS45_12560 PF13307 Helicase C-terminal domain AMBAS45_12605 PF00128 Alpha amylase, catalytic domain AMBAS45_12635 PF00753 Metallo-beta-lactamase superfamily AMBAS45_12635 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMBAS45_12640 PF00593 TonB dependent receptor AMBAS45_12640 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_12645 PF13614 AAA domain AMBAS45_12655 PF01634 ATP phosphoribosyltransferase AMBAS45_12655 PF08029 HisG, C-terminal domain AMBAS45_12660 PF00815 Histidinol dehydrogenase AMBAS45_12665 PF00155 Aminotransferase class I and II AMBAS45_12670 PF00475 Imidazoleglycerol-phosphate dehydratase AMBAS45_12675 PF00117 Glutamine amidotransferase class-I AMBAS45_12680 PF00977 Histidine biosynthesis protein AMBAS45_12685 PF00977 Histidine biosynthesis protein AMBAS45_12690 PF01502 Phosphoribosyl-AMP cyclohydrolase AMBAS45_12690 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMBAS45_12700 PF01226 Formate/nitrite transporter AMBAS45_12705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_12705 PF00672 HAMP domain AMBAS45_12710 PF00675 Insulinase (Peptidase family M16) AMBAS45_12710 PF05193 Peptidase M16 inactive domain AMBAS45_12715 PF10502 Signal peptidase, peptidase S26 AMBAS45_12720 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_12720 PF00593 TonB dependent receptor AMBAS45_12735 PF05191 Adenylate kinase, active site lid AMBAS45_12740 PF00183 Hsp90 protein AMBAS45_12740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_12745 PF02132 RecR protein AMBAS45_12745 PF13662 Toprim domain AMBAS45_12760 PF00970 Oxidoreductase FAD-binding domain AMBAS45_12760 PF00175 Oxidoreductase NAD-binding domain AMBAS45_12765 PF02575 YbaB/EbfC DNA-binding family AMBAS45_12770 PF12170 DNA polymerase III tau subunit V interacting with alpha AMBAS45_12770 PF12169 DNA polymerase III subunits gamma and tau domain III AMBAS45_12770 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMBAS45_12775 PF00156 Phosphoribosyl transferase domain AMBAS45_12785 PF05114 Protein of unknown function (DUF692) AMBAS45_12805 PF01066 CDP-alcohol phosphatidyltransferase AMBAS45_12825 PF01565 FAD binding domain AMBAS45_12825 PF09330 D-lactate dehydrogenase, membrane binding AMBAS45_12830 PF02652 L-lactate permease AMBAS45_12835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_12835 PF03466 LysR substrate binding domain AMBAS45_12850 PF10431 C-terminal, D2-small domain, of ClpB protein AMBAS45_12850 PF00004 ATPase family associated with various cellular activities (AAA) AMBAS45_12850 PF07724 AAA domain (Cdc48 subfamily) AMBAS45_12850 PF17871 AAA lid domain AMBAS45_12850 PF02861 Clp amino terminal domain, pathogenicity island component AMBAS45_12860 PF01479 S4 domain AMBAS45_12860 PF00849 RNA pseudouridylate synthase AMBAS45_12865 PF13525 Outer membrane lipoprotein AMBAS45_12875 PF04542 Sigma-70 region 2 AMBAS45_12875 PF04545 Sigma-70, region 4 AMBAS45_12890 PF00106 short chain dehydrogenase AMBAS45_12910 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMBAS45_12910 PF00691 OmpA family AMBAS45_12915 PF01618 MotA/TolQ/ExbB proton channel family AMBAS45_12920 PF02609 Exonuclease VII small subunit AMBAS45_12925 PF00348 Polyprenyl synthetase AMBAS45_12930 PF02780 Transketolase, C-terminal domain AMBAS45_12930 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMBAS45_12930 PF02779 Transketolase, pyrimidine binding domain AMBAS45_12935 PF04608 Phosphatidylglycerophosphatase A AMBAS45_12940 PF00586 AIR synthase related protein, N-terminal domain AMBAS45_12940 PF02769 AIR synthase related protein, C-terminal domain AMBAS45_12945 PF01029 NusB family AMBAS45_12950 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMBAS45_12955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMBAS45_12955 PF00925 GTP cyclohydrolase II AMBAS45_12960 PF00677 Lumazine binding domain AMBAS45_12965 PF01872 RibD C-terminal domain AMBAS45_12965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMBAS45_12970 PF03477 ATP cone domain AMBAS45_12975 PF00464 Serine hydroxymethyltransferase AMBAS45_12985 PF12848 ABC transporter AMBAS45_12985 PF00005 ABC transporter AMBAS45_12995 PF18073 Rubredoxin metal binding domain AMBAS45_13005 PF18429 Domain of unknown function (DUF5609) AMBAS45_13015 PF01026 TatD related DNase AMBAS45_13020 PF01243 Pyridoxamine 5'-phosphate oxidase AMBAS45_13020 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMBAS45_13025 PF07650 KH domain AMBAS45_13025 PF01926 50S ribosome-binding GTPase AMBAS45_13030 PF00035 Double-stranded RNA binding motif AMBAS45_13030 PF14622 Ribonuclease-III-like AMBAS45_13035 PF10502 Signal peptidase, peptidase S26 AMBAS45_13040 PF06421 GTP-binding protein LepA C-terminus AMBAS45_13040 PF00009 Elongation factor Tu GTP binding domain AMBAS45_13040 PF03144 Elongation factor Tu domain 2 AMBAS45_13040 PF00679 Elongation factor G C-terminus AMBAS45_13050 PF03888 MucB/RseB N-terminal domain AMBAS45_13050 PF17188 MucB/RseB C-terminal domain AMBAS45_13060 PF08281 Sigma-70, region 4 AMBAS45_13060 PF04542 Sigma-70 region 2 AMBAS45_13065 PF02910 Fumarate reductase flavoprotein C-term AMBAS45_13065 PF00890 FAD binding domain AMBAS45_13080 PF03937 Flavinator of succinate dehydrogenase AMBAS45_13090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBAS45_13095 PF00543 Nitrogen regulatory protein P-II AMBAS45_13100 PF02540 NAD synthase AMBAS45_13135 PF00114 Pilin (bacterial filament) AMBAS45_13135 PF07963 Prokaryotic N-terminal methylation motif AMBAS45_13160 PF02401 LytB protein AMBAS45_13165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBAS45_13170 PF01252 Signal peptidase (SPase) II AMBAS45_13175 PF00133 tRNA synthetases class I (I, L, M and V) AMBAS45_13175 PF06827 Zinc finger found in FPG and IleRS AMBAS45_13175 PF08264 Anticodon-binding domain of tRNA AMBAS45_13180 PF01687 Riboflavin kinase AMBAS45_13180 PF06574 FAD synthetase AMBAS45_13185 PF03023 Lipid II flippase MurJ AMBAS45_13190 PF01649 Ribosomal protein S20 AMBAS45_13195 PF00106 short chain dehydrogenase AMBAS45_13205 PF00106 short chain dehydrogenase AMBAS45_13210 PF01758 Sodium Bile acid symporter family AMBAS45_13215 PF03466 LysR substrate binding domain AMBAS45_13215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_13230 PF07687 Peptidase dimerisation domain AMBAS45_13230 PF01546 Peptidase family M20/M25/M40 AMBAS45_13240 PF13145 PPIC-type PPIASE domain AMBAS45_13245 PF00216 Bacterial DNA-binding protein AMBAS45_13250 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMBAS45_13250 PF00004 ATPase family associated with various cellular activities (AAA) AMBAS45_13250 PF05362 Lon protease (S16) C-terminal proteolytic domain AMBAS45_13255 PF07724 AAA domain (Cdc48 subfamily) AMBAS45_13255 PF06689 ClpX C4-type zinc finger AMBAS45_13255 PF10431 C-terminal, D2-small domain, of ClpB protein AMBAS45_13260 PF00574 Clp protease AMBAS45_13265 PF05698 Bacterial trigger factor protein (TF) C-terminus AMBAS45_13265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBAS45_13265 PF05697 Bacterial trigger factor protein (TF) AMBAS45_13270 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMBAS45_13270 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMBAS45_13280 PF18389 TrmO C-terminal domain AMBAS45_13280 PF01980 tRNA-methyltransferase O AMBAS45_13285 PF03129 Anticodon binding domain AMBAS45_13285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMBAS45_13290 PF00753 Metallo-beta-lactamase superfamily AMBAS45_13290 PF12706 Beta-lactamase superfamily domain AMBAS45_13295 PF02253 Phospholipase A1 AMBAS45_13300 PF00850 Histone deacetylase domain AMBAS45_13315 PF02540 NAD synthase AMBAS45_13315 PF00958 GMP synthase C terminal domain AMBAS45_13315 PF00117 Glutamine amidotransferase class-I AMBAS45_13320 PF00478 IMP dehydrogenase / GMP reductase domain AMBAS45_13320 PF00571 CBS domain AMBAS45_13325 PF13742 OB-fold nucleic acid binding domain AMBAS45_13325 PF02601 Exonuclease VII, large subunit AMBAS45_13345 PF01926 50S ribosome-binding GTPase AMBAS45_13345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMBAS45_13350 PF13360 PQQ-like domain AMBAS45_13355 PF09976 Tetratricopeptide repeat-like domain AMBAS45_13360 PF13393 Histidyl-tRNA synthetase AMBAS45_13360 PF03129 Anticodon binding domain AMBAS45_13365 PF04551 GcpE protein AMBAS45_13370 PF13464 Domain of unknown function (DUF4115) AMBAS45_13380 PF04055 Radical SAM superfamily AMBAS45_13385 PF00334 Nucleoside diphosphate kinase AMBAS45_13390 PF02657 Fe-S metabolism associated domain AMBAS45_13395 PF01883 Iron-sulfur cluster assembly protein AMBAS45_13400 PF01521 Iron-sulphur cluster biosynthesis AMBAS45_13405 PF00266 Aminotransferase class-V AMBAS45_13410 PF01458 Uncharacterized protein family (UPF0051) AMBAS45_13415 PF00005 ABC transporter AMBAS45_13420 PF01458 Uncharacterized protein family (UPF0051) AMBAS45_13425 PF00266 Aminotransferase class-V AMBAS45_13430 PF02082 Transcriptional regulator AMBAS45_13440 PF00743 Flavin-binding monooxygenase-like AMBAS45_13445 PF00132 Bacterial transferase hexapeptide (six repeats) AMBAS45_13445 PF06426 Serine acetyltransferase, N-terminal AMBAS45_13450 PF00588 SpoU rRNA Methylase family AMBAS45_13455 PF00459 Inositol monophosphatase family AMBAS45_13465 PF00072 Response regulator receiver domain AMBAS45_13465 PF04397 LytTr DNA-binding domain AMBAS45_13470 PF07549 SecD/SecF GG Motif AMBAS45_13470 PF02355 Protein export membrane protein AMBAS45_13475 PF02355 Protein export membrane protein AMBAS45_13475 PF13721 SecD export protein N-terminal TM region AMBAS45_13475 PF07549 SecD/SecF GG Motif AMBAS45_13480 PF02699 Preprotein translocase subunit AMBAS45_13485 PF01702 Queuine tRNA-ribosyltransferase AMBAS45_13490 PF02547 Queuosine biosynthesis protein AMBAS45_13505 PF04012 PspA/IM30 family AMBAS45_13510 PF07885 Ion channel AMBAS45_13525 PF06693 Protein of unknown function (DUF1190) AMBAS45_13530 PF03738 Glutathionylspermidine synthase preATP-grasp AMBAS45_13545 PF00005 ABC transporter AMBAS45_13560 PF04960 Glutaminase AMBAS45_13565 PF00245 Alkaline phosphatase AMBAS45_13570 PF00072 Response regulator receiver domain AMBAS45_13575 PF00463 Isocitrate lyase family AMBAS45_13580 PF03466 LysR substrate binding domain AMBAS45_13580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_13585 PF01274 Malate synthase AMBAS45_13595 PF01370 NAD dependent epimerase/dehydratase family AMBAS45_13600 PF13180 PDZ domain AMBAS45_13635 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AMBAS45_13635 PF00132 Bacterial transferase hexapeptide (six repeats) AMBAS45_13635 PF14602 Hexapeptide repeat of succinyl-transferase AMBAS45_13650 PF00535 Glycosyl transferase family 2 AMBAS45_13670 PF13537 Glutamine amidotransferase domain AMBAS45_13670 PF00733 Asparagine synthase AMBAS45_13680 PF02350 UDP-N-acetylglucosamine 2-epimerase AMBAS45_13685 PF02350 UDP-N-acetylglucosamine 2-epimerase AMBAS45_13690 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMBAS45_13690 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMBAS45_13690 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMBAS45_13695 PF01757 Acyltransferase family AMBAS45_13760 PF01522 Polysaccharide deacetylase AMBAS45_13765 PF02397 Bacterial sugar transferase AMBAS45_13780 PF13614 AAA domain AMBAS45_13790 PF13401 AAA domain AMBAS45_13790 PF01471 Putative peptidoglycan binding domain AMBAS45_13795 PF01541 GIY-YIG catalytic domain AMBAS45_13805 PF03710 Glutamate-ammonia ligase adenylyltransferase AMBAS45_13805 PF08335 GlnD PII-uridylyltransferase AMBAS45_13815 PF03279 Bacterial lipid A biosynthesis acyltransferase AMBAS45_13830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_13830 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_13830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_13830 PF09317 Domain of unknown function (DUF1974) AMBAS45_13845 PF00563 EAL domain AMBAS45_13845 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_13845 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_13850 PF00265 Thymidine kinase AMBAS45_13865 PF04820 Tryptophan halogenase AMBAS45_13870 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_13895 PF01926 50S ribosome-binding GTPase AMBAS45_13900 PF00588 SpoU rRNA Methylase family AMBAS45_13900 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMBAS45_13940 PF00171 Aldehyde dehydrogenase family AMBAS45_13945 PF05199 GMC oxidoreductase AMBAS45_13945 PF00732 GMC oxidoreductase AMBAS45_13960 PF13185 GAF domain AMBAS45_13960 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_13965 PF05971 RNA methyltransferase AMBAS45_13970 PF00376 MerR family regulatory protein AMBAS45_13970 PF09278 MerR, DNA binding AMBAS45_14000 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_14000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_14000 PF18158 Adaptive response protein AidB N-terminal domain AMBAS45_14005 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_14005 PF17151 Periplasmic sensor domain AMBAS45_14035 PF03965 Penicillinase repressor AMBAS45_14055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBAS45_14065 PF01799 [2Fe-2S] binding domain AMBAS45_14065 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBAS45_14070 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMBAS45_14070 PF00941 FAD binding domain in molybdopterin dehydrogenase AMBAS45_14075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBAS45_14075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMBAS45_14080 PF01738 Dienelactone hydrolase family AMBAS45_14115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMBAS45_14120 PF00528 Binding-protein-dependent transport system inner membrane component AMBAS45_14130 PF00005 ABC transporter AMBAS45_14130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMBAS45_14140 PF00106 short chain dehydrogenase AMBAS45_14140 PF00561 alpha/beta hydrolase fold AMBAS45_14145 PF01965 DJ-1/PfpI family AMBAS45_14150 PF03631 Virulence factor BrkB AMBAS45_14155 PF07690 Major Facilitator Superfamily AMBAS45_14195 PF07152 YaeQ protein AMBAS45_14225 PF07690 Major Facilitator Superfamily AMBAS45_14230 PF01432 Peptidase family M3 AMBAS45_14240 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMBAS45_14245 PF00583 Acetyltransferase (GNAT) family AMBAS45_14245 PF00696 Amino acid kinase family AMBAS45_14250 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBAS45_14250 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMBAS45_14250 PF06827 Zinc finger found in FPG and IleRS AMBAS45_14270 PF09382 RQC domain AMBAS45_14270 PF16124 RecQ zinc-binding AMBAS45_14270 PF00570 HRDC domain AMBAS45_14270 PF00270 DEAD/DEAH box helicase AMBAS45_14270 PF00271 Helicase conserved C-terminal domain AMBAS45_14290 PF00672 HAMP domain AMBAS45_14290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_14290 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_14290 PF00072 Response regulator receiver domain AMBAS45_14290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBAS45_14290 PF01627 Hpt domain AMBAS45_14295 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_14295 PF17158 Membrane-associated sensor, integral membrane domain AMBAS45_14310 PF01590 GAF domain AMBAS45_14310 PF00360 Phytochrome region AMBAS45_14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_14310 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_14310 PF08446 PAS fold AMBAS45_14315 PF07995 Glucose / Sorbosone dehydrogenase AMBAS45_14340 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBAS45_14340 PF01799 [2Fe-2S] binding domain AMBAS45_14350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMBAS45_14350 PF01348 Type II intron maturase AMBAS45_14365 PF01597 Glycine cleavage H-protein AMBAS45_14370 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMBAS45_14370 PF01571 Aminomethyltransferase folate-binding domain AMBAS45_14375 PF07690 Major Facilitator Superfamily AMBAS45_14380 PF01979 Amidohydrolase family AMBAS45_14385 PF01380 SIS domain AMBAS45_14390 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMBAS45_14395 PF02838 Glycosyl hydrolase family 20, domain 2 AMBAS45_14395 PF03173 Putative carbohydrate binding domain AMBAS45_14395 PF00728 Glycosyl hydrolase family 20, catalytic domain AMBAS45_14405 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_14410 PF04820 Tryptophan halogenase AMBAS45_14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_14415 PF03466 LysR substrate binding domain AMBAS45_14425 PF00557 Metallopeptidase family M24 AMBAS45_14425 PF01321 Creatinase/Prolidase N-terminal domain AMBAS45_14440 PF01494 FAD binding domain AMBAS45_14445 PF01494 FAD binding domain AMBAS45_14450 PF00557 Metallopeptidase family M24 AMBAS45_14450 PF05195 Aminopeptidase P, N-terminal domain AMBAS45_14455 PF03695 Uncharacterised protein family (UPF0149) AMBAS45_14465 PF00294 pfkB family carbohydrate kinase AMBAS45_14470 PF01156 Inosine-uridine preferring nucleoside hydrolase AMBAS45_14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_14475 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_14475 PF00989 PAS fold AMBAS45_14475 PF13188 PAS domain AMBAS45_14475 PF13426 PAS domain AMBAS45_14480 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMBAS45_14485 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMBAS45_14490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMBAS45_14490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBAS45_14490 PF01842 ACT domain AMBAS45_14510 PF06945 Protein of unknown function (DUF1289) AMBAS45_14520 PF00873 AcrB/AcrD/AcrF family AMBAS45_14525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_14530 PF03466 LysR substrate binding domain AMBAS45_14530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_14535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMBAS45_14535 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_14540 PF00364 Biotin-requiring enzyme AMBAS45_14540 PF02817 e3 binding domain AMBAS45_14540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMBAS45_14545 PF00456 Transketolase, thiamine diphosphate binding domain AMBAS45_14545 PF17831 Pyruvate dehydrogenase E1 component middle domain AMBAS45_14550 PF07729 FCD domain AMBAS45_14550 PF00392 Bacterial regulatory proteins, gntR family AMBAS45_14560 PF01510 N-acetylmuramoyl-L-alanine amidase AMBAS45_14570 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMBAS45_14570 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMBAS45_14575 PF07963 Prokaryotic N-terminal methylation motif AMBAS45_14580 PF00482 Type II secretion system (T2SS), protein F AMBAS45_14585 PF06750 Bacterial Peptidase A24 N-terminal domain AMBAS45_14585 PF01478 Type IV leader peptidase family AMBAS45_14590 PF01121 Dephospho-CoA kinase AMBAS45_14595 PF07072 Cell division protein AMBAS45_14605 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMBAS45_14610 PF00672 HAMP domain AMBAS45_14610 PF02743 Cache domain AMBAS45_14610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_14615 PF00072 Response regulator receiver domain AMBAS45_14615 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_14620 PF13614 AAA domain AMBAS45_14630 PF01584 CheW-like domain AMBAS45_14630 PF01627 Hpt domain AMBAS45_14630 PF07194 P2 response regulator binding domain AMBAS45_14630 PF02895 Signal transducing histidine kinase, homodimeric domain AMBAS45_14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_14635 PF00072 Response regulator receiver domain AMBAS45_14640 PF03705 CheR methyltransferase, all-alpha domain AMBAS45_14640 PF01739 CheR methyltransferase, SAM binding domain AMBAS45_14650 PF00072 Response regulator receiver domain AMBAS45_14650 PF01339 CheB methylesterase AMBAS45_14655 PF01584 CheW-like domain AMBAS45_14660 PF02743 Cache domain AMBAS45_14660 PF00672 HAMP domain AMBAS45_14660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_14665 PF00293 NUDIX domain AMBAS45_14670 PF02810 SEC-C motif AMBAS45_14670 PF07517 SecA DEAD-like domain AMBAS45_14670 PF01043 SecA preprotein cross-linking domain AMBAS45_14670 PF07516 SecA Wing and Scaffold domain AMBAS45_14675 PF01551 Peptidase family M23 AMBAS45_14675 PF08525 Opacity-associated protein A N-terminal motif AMBAS45_14675 PF01476 LysM domain AMBAS45_14680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMBAS45_14685 PF00091 Tubulin/FtsZ family, GTPase domain AMBAS45_14685 PF12327 FtsZ family, C-terminal domain AMBAS45_14690 PF02491 SHS2 domain inserted in FTSA AMBAS45_14695 PF08478 POTRA domain, FtsQ-type AMBAS45_14695 PF03799 Cell division protein FtsQ AMBAS45_14700 PF01820 D-ala D-ala ligase N-terminus AMBAS45_14700 PF07478 D-ala D-ala ligase C-terminus AMBAS45_14705 PF01225 Mur ligase family, catalytic domain AMBAS45_14705 PF02875 Mur ligase family, glutamate ligase domain AMBAS45_14705 PF08245 Mur ligase middle domain AMBAS45_14710 PF03033 Glycosyltransferase family 28 N-terminal domain AMBAS45_14710 PF04101 Glycosyltransferase family 28 C-terminal domain AMBAS45_14715 PF01098 Cell cycle protein AMBAS45_14720 PF02875 Mur ligase family, glutamate ligase domain AMBAS45_14720 PF08245 Mur ligase middle domain AMBAS45_14725 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMBAS45_14725 PF00953 Glycosyl transferase family 4 AMBAS45_14730 PF08245 Mur ligase middle domain AMBAS45_14730 PF02875 Mur ligase family, glutamate ligase domain AMBAS45_14730 PF01225 Mur ligase family, catalytic domain AMBAS45_14735 PF02875 Mur ligase family, glutamate ligase domain AMBAS45_14735 PF08245 Mur ligase middle domain AMBAS45_14735 PF01225 Mur ligase family, catalytic domain AMBAS45_14740 PF00905 Penicillin binding protein transpeptidase domain AMBAS45_14740 PF03717 Penicillin-binding Protein dimerisation domain AMBAS45_14745 PF04999 Cell division protein FtsL AMBAS45_14750 PF01795 MraW methylase family AMBAS45_14755 PF02381 MraZ protein, putative antitoxin-like AMBAS45_14775 PF00873 AcrB/AcrD/AcrF family AMBAS45_14780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBAS45_14780 PF00529 HlyD membrane-fusion protein of T1SS AMBAS45_14800 PF00462 Glutaredoxin AMBAS45_14800 PF08534 Redoxin AMBAS45_14805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMBAS45_14815 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_14815 PF17158 Membrane-associated sensor, integral membrane domain AMBAS45_14825 PF00158 Sigma-54 interaction domain AMBAS45_14825 PF00072 Response regulator receiver domain AMBAS45_14825 PF02954 Bacterial regulatory protein, Fis family AMBAS45_14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_14830 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_14830 PF00072 Response regulator receiver domain AMBAS45_14830 PF09456 RcsC Alpha-Beta-Loop (ABL) AMBAS45_14835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMBAS45_14835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMBAS45_14850 PF05552 Conserved TM helix AMBAS45_14850 PF00924 Mechanosensitive ion channel AMBAS45_14855 PF04452 RNA methyltransferase AMBAS45_14860 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMBAS45_14860 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMBAS45_14865 PF02622 Uncharacterized ACR, COG1678 AMBAS45_14870 PF03652 Holliday junction resolvase AMBAS45_14880 PF00437 Type II/IV secretion system protein AMBAS45_14885 PF00437 Type II/IV secretion system protein AMBAS45_14890 PF01168 Alanine racemase, N-terminal domain AMBAS45_14895 PF03807 NADP oxidoreductase coenzyme F420-dependent AMBAS45_14895 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMBAS45_14900 PF02325 YGGT family AMBAS45_14910 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_14910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBAS45_14935 PF00080 Copper/zinc superoxide dismutase (SODC) AMBAS45_14940 PF02566 OsmC-like protein AMBAS45_14945 PF01625 Peptide methionine sulfoxide reductase AMBAS45_14955 PF03591 AzlC protein AMBAS45_14965 PF07690 Major Facilitator Superfamily AMBAS45_14980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBAS45_14980 PF02770 Acyl-CoA dehydrogenase, middle domain AMBAS45_14980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBAS45_14985 PF03060 Nitronate monooxygenase AMBAS45_14990 PF01039 Carboxyl transferase domain AMBAS45_14995 PF00378 Enoyl-CoA hydratase/isomerase AMBAS45_15000 PF00289 Biotin carboxylase, N-terminal domain AMBAS45_15000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMBAS45_15000 PF00364 Biotin-requiring enzyme AMBAS45_15000 PF02785 Biotin carboxylase C-terminal domain AMBAS45_15015 PF00501 AMP-binding enzyme AMBAS45_15015 PF13193 AMP-binding enzyme C-terminal domain AMBAS45_15020 PF03883 Peroxide stress protein YaaA AMBAS45_15030 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMBAS45_15035 PF00342 Phosphoglucose isomerase AMBAS45_15045 PF03167 Uracil DNA glycosylase superfamily AMBAS45_15050 PF00291 Pyridoxal-phosphate dependent enzyme AMBAS45_15050 PF14821 Threonine synthase N terminus AMBAS45_15055 PF00288 GHMP kinases N terminal domain AMBAS45_15055 PF08544 GHMP kinases C terminal AMBAS45_15060 PF03447 Homoserine dehydrogenase, NAD binding domain AMBAS45_15060 PF13840 ACT domain AMBAS45_15060 PF00742 Homoserine dehydrogenase AMBAS45_15060 PF01842 ACT domain AMBAS45_15060 PF00696 Amino acid kinase family AMBAS45_15065 PF17755 UvrA DNA-binding domain AMBAS45_15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_15070 PF03466 LysR substrate binding domain AMBAS45_15075 PF08240 Alcohol dehydrogenase GroES-like domain AMBAS45_15075 PF00107 Zinc-binding dehydrogenase AMBAS45_15085 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_15085 PF00072 Response regulator receiver domain AMBAS45_15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_15090 PF07730 Histidine kinase AMBAS45_15105 PF01022 Bacterial regulatory protein, arsR family AMBAS45_15115 PF03358 NADPH-dependent FMN reductase AMBAS45_15120 PF01758 Sodium Bile acid symporter family AMBAS45_15125 PF01339 CheB methylesterase AMBAS45_15125 PF00072 Response regulator receiver domain AMBAS45_15130 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMBAS45_15135 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_15135 PF00072 Response regulator receiver domain AMBAS45_15140 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_15140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_15140 PF08521 Two-component sensor kinase N-terminal AMBAS45_15160 PF00291 Pyridoxal-phosphate dependent enzyme AMBAS45_15170 PF04116 Fatty acid hydroxylase superfamily AMBAS45_15185 PF02371 Transposase IS116/IS110/IS902 family AMBAS45_15185 PF01548 Transposase AMBAS45_15195 PF16653 Saccharopine dehydrogenase C-terminal domain AMBAS45_15195 PF03435 Saccharopine dehydrogenase NADP binding domain AMBAS45_15200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMBAS45_15215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMBAS45_15220 PF04348 LppC putative lipoprotein AMBAS45_15225 PF02021 Uncharacterised protein family UPF0102 AMBAS45_15230 PF00534 Glycosyl transferases group 1 AMBAS45_15235 PF13580 SIS domain AMBAS45_15240 PF04972 BON domain AMBAS45_15245 PF07690 Major Facilitator Superfamily AMBAS45_15255 PF00893 Small Multidrug Resistance protein AMBAS45_15260 PF07730 Histidine kinase AMBAS45_15265 PF00072 Response regulator receiver domain AMBAS45_15265 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_15280 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_15280 PF00593 TonB dependent receptor AMBAS45_15295 PF00285 Citrate synthase, C-terminal domain AMBAS45_15300 PF00694 Aconitase C-terminal domain AMBAS45_15300 PF00330 Aconitase family (aconitate hydratase) AMBAS45_15305 PF04303 PrpF protein AMBAS45_15310 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_15315 PF00474 Sodium:solute symporter family AMBAS45_15330 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMBAS45_15330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_15330 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_15330 PF00072 Response regulator receiver domain AMBAS45_15330 PF00989 PAS fold AMBAS45_15330 PF01627 Hpt domain AMBAS45_15335 PF01510 N-acetylmuramoyl-L-alanine amidase AMBAS45_15340 PF04898 Glutamate synthase central domain AMBAS45_15340 PF00310 Glutamine amidotransferases class-II AMBAS45_15340 PF01645 Conserved region in glutamate synthase AMBAS45_15340 PF01493 GXGXG motif AMBAS45_15345 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_15345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMBAS45_15360 PF01048 Phosphorylase superfamily AMBAS45_15365 PF03186 CobD/Cbib protein AMBAS45_15370 PF01497 Periplasmic binding protein AMBAS45_15390 PF01266 FAD dependent oxidoreductase AMBAS45_15395 PF07237 Protein of unknown function (DUF1428) AMBAS45_15420 PF01551 Peptidase family M23 AMBAS45_15420 PF01464 Transglycosylase SLT domain AMBAS45_15420 PF10145 Phage-related minor tail protein AMBAS45_15425 PF03702 Anhydro-N-acetylmuramic acid kinase AMBAS45_15430 PF03600 Citrate transporter AMBAS45_15435 PF07690 Major Facilitator Superfamily AMBAS45_15445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBAS45_15455 PF01053 Cys/Met metabolism PLP-dependent enzyme AMBAS45_15460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBAS45_15465 PF13417 Glutathione S-transferase, N-terminal domain AMBAS45_15465 PF00043 Glutathione S-transferase, C-terminal domain AMBAS45_15470 PF01521 Iron-sulphur cluster biosynthesis AMBAS45_15475 PF03976 Polyphosphate kinase 2 (PPK2) AMBAS45_15480 PF03776 Septum formation topological specificity factor MinE AMBAS45_15485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMBAS45_15490 PF03775 Septum formation inhibitor MinC, C-terminal domain AMBAS45_15490 PF05209 Septum formation inhibitor MinC, N-terminal domain AMBAS45_15495 PF10415 Fumarase C C-terminus AMBAS45_15495 PF00206 Lyase AMBAS45_15505 PF00127 Copper binding proteins, plastocyanin/azurin family AMBAS45_15510 PF01548 Transposase AMBAS45_15510 PF02371 Transposase IS116/IS110/IS902 family AMBAS45_15545 PF01566 Natural resistance-associated macrophage protein AMBAS45_15550 PF00155 Aminotransferase class I and II AMBAS45_15555 PF13188 PAS domain AMBAS45_15555 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_15555 PF00072 Response regulator receiver domain AMBAS45_15555 PF08448 PAS fold AMBAS45_15555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_15565 PF00120 Glutamine synthetase, catalytic domain AMBAS45_15565 PF03951 Glutamine synthetase, beta-Grasp domain AMBAS45_15575 PF00989 PAS fold AMBAS45_15575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_15575 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_15580 PF00158 Sigma-54 interaction domain AMBAS45_15580 PF00072 Response regulator receiver domain AMBAS45_15580 PF02954 Bacterial regulatory protein, Fis family AMBAS45_15585 PF13443 Cro/C1-type HTH DNA-binding domain AMBAS45_15600 PF00072 Response regulator receiver domain AMBAS45_15605 PF01553 Acyltransferase AMBAS45_15610 PF06877 Regulator of ribonuclease activity B AMBAS45_15635 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBAS45_15635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_15635 PF00672 HAMP domain AMBAS45_15635 PF00072 Response regulator receiver domain AMBAS45_15635 PF01627 Hpt domain AMBAS45_15635 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_15640 PF10458 Valyl tRNA synthetase tRNA binding arm AMBAS45_15640 PF00133 tRNA synthetases class I (I, L, M and V) AMBAS45_15640 PF08264 Anticodon-binding domain of tRNA AMBAS45_15645 PF04364 DNA polymerase III chi subunit, HolC AMBAS45_15650 PF00883 Cytosol aminopeptidase family, catalytic domain AMBAS45_15650 PF02789 Cytosol aminopeptidase family, N-terminal domain AMBAS45_15655 PF03739 Lipopolysaccharide export system permease LptF/LptG AMBAS45_15660 PF03739 Lipopolysaccharide export system permease LptF/LptG AMBAS45_15675 PF04542 Sigma-70 region 2 AMBAS45_15675 PF04545 Sigma-70, region 4 AMBAS45_15725 PF13361 UvrD-like helicase C-terminal domain AMBAS45_15725 PF00580 UvrD/REP helicase N-terminal domain AMBAS45_15740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMBAS45_15740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMBAS45_15745 PF01627 Hpt domain AMBAS45_15745 PF00072 Response regulator receiver domain AMBAS45_15745 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_15745 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBAS45_15750 PF01594 AI-2E family transporter AMBAS45_15770 PF00230 Major intrinsic protein AMBAS45_15775 PF00892 EamA-like transporter family AMBAS45_15790 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_15790 PF00593 TonB dependent receptor AMBAS45_15800 PF00593 TonB dependent receptor AMBAS45_15800 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_15810 PF00474 Sodium:solute symporter family AMBAS45_15830 PF03328 HpcH/HpaI aldolase/citrate lyase family AMBAS45_15840 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_15875 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMBAS45_15880 PF01321 Creatinase/Prolidase N-terminal domain AMBAS45_15880 PF00557 Metallopeptidase family M24 AMBAS45_15885 PF05221 S-adenosyl-L-homocysteine hydrolase AMBAS45_15885 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMBAS45_15890 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_15890 PF08448 PAS fold AMBAS45_15895 PF03547 Membrane transport protein AMBAS45_15900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMBAS45_15900 PF13360 PQQ-like domain AMBAS45_15925 PF00005 ABC transporter AMBAS45_15935 PF02789 Cytosol aminopeptidase family, N-terminal domain AMBAS45_15935 PF00883 Cytosol aminopeptidase family, catalytic domain AMBAS45_15940 PF12706 Beta-lactamase superfamily domain AMBAS45_15945 PF03070 TENA/THI-4/PQQC family AMBAS45_15950 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMBAS45_15955 PF04055 Radical SAM superfamily AMBAS45_15955 PF13186 Iron-sulfur cluster-binding domain AMBAS45_15980 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_15980 PF00072 Response regulator receiver domain AMBAS45_15985 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_15985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_15995 PF12801 4Fe-4S binding domain AMBAS45_15995 PF04205 FMN-binding domain AMBAS45_16000 PF00171 Aldehyde dehydrogenase family AMBAS45_16005 PF00072 Response regulator receiver domain AMBAS45_16005 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_16010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_16010 PF07730 Histidine kinase AMBAS45_16010 PF05231 MASE1 AMBAS45_16015 PF08447 PAS fold AMBAS45_16015 PF13426 PAS domain AMBAS45_16015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_16025 PF00171 Aldehyde dehydrogenase family AMBAS45_16030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMBAS45_16030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMBAS45_16035 PF02028 BCCT, betaine/carnitine/choline family transporter AMBAS45_16050 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_16050 PF00593 TonB dependent receptor AMBAS45_16055 PF00149 Calcineurin-like phosphoesterase AMBAS45_16055 PF16656 Purple acid Phosphatase, N-terminal domain AMBAS45_16060 PF03466 LysR substrate binding domain AMBAS45_16060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_16065 PF01070 FMN-dependent dehydrogenase AMBAS45_16070 PF09330 D-lactate dehydrogenase, membrane binding AMBAS45_16070 PF01565 FAD binding domain AMBAS45_16075 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_16080 PF03783 Curli production assembly/transport component CsgG AMBAS45_16105 PF00082 Subtilase family AMBAS45_16110 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_16110 PF00072 Response regulator receiver domain AMBAS45_16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_16115 PF07730 Histidine kinase AMBAS45_16125 PF00271 Helicase conserved C-terminal domain AMBAS45_16125 PF00270 DEAD/DEAH box helicase AMBAS45_16130 PF00563 EAL domain AMBAS45_16130 PF13426 PAS domain AMBAS45_16130 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_16145 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMBAS45_16145 PF12795 Mechanosensitive ion channel porin domain AMBAS45_16145 PF00924 Mechanosensitive ion channel AMBAS45_16170 PF00563 EAL domain AMBAS45_16170 PF13426 PAS domain AMBAS45_16170 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_16185 PF03466 LysR substrate binding domain AMBAS45_16195 PF01925 Sulfite exporter TauE/SafE AMBAS45_16205 PF08769 Sporulation initiation factor Spo0A C terminal AMBAS45_16205 PF00072 Response regulator receiver domain AMBAS45_16215 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_16215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_16225 PF03104 DNA polymerase family B, exonuclease domain AMBAS45_16225 PF00136 DNA polymerase family B AMBAS45_16235 PF13193 AMP-binding enzyme C-terminal domain AMBAS45_16235 PF00501 AMP-binding enzyme AMBAS45_16250 PF05958 tRNA (Uracil-5-)-methyltransferase AMBAS45_16255 PF00440 Bacterial regulatory proteins, tetR family AMBAS45_16265 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_16265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMBAS45_16275 PF03167 Uracil DNA glycosylase superfamily AMBAS45_16280 PF00563 EAL domain AMBAS45_16280 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_16280 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_16290 PF01507 Phosphoadenosine phosphosulfate reductase family AMBAS45_16295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMBAS45_16295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMBAS45_16300 PF00667 FAD binding domain AMBAS45_16300 PF00175 Oxidoreductase NAD-binding domain AMBAS45_16300 PF00258 Flavodoxin AMBAS45_16320 PF04024 PspC domain AMBAS45_16325 PF04012 PspA/IM30 family AMBAS45_16335 PF01207 Dihydrouridine synthase (Dus) AMBAS45_16340 PF00589 Phage integrase family AMBAS45_16340 PF02899 Phage integrase, N-terminal SAM-like domain AMBAS45_16455 PF01389 OmpA-like transmembrane domain AMBAS45_16455 PF00691 OmpA family AMBAS45_16460 PF00004 ATPase family associated with various cellular activities (AAA) AMBAS45_16460 PF05362 Lon protease (S16) C-terminal proteolytic domain AMBAS45_16460 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMBAS45_16465 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_16465 PF00563 EAL domain AMBAS45_16465 PF03707 Bacterial signalling protein N terminal repeat AMBAS45_16470 PF00756 Putative esterase AMBAS45_16475 PF01553 Acyltransferase AMBAS45_16480 PF01553 Acyltransferase AMBAS45_16485 PF00924 Mechanosensitive ion channel AMBAS45_16500 PF01370 NAD dependent epimerase/dehydratase family AMBAS45_16505 PF00209 Sodium:neurotransmitter symporter family AMBAS45_16520 PF01625 Peptide methionine sulfoxide reductase AMBAS45_16535 PF00258 Flavodoxin AMBAS45_16545 PF02472 Biopolymer transport protein ExbD/TolR AMBAS45_16555 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AMBAS45_16560 PF01270 Glycosyl hydrolases family 8 AMBAS45_16590 PF05175 Methyltransferase small domain AMBAS45_16595 PF13460 NAD(P)H-binding AMBAS45_16600 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMBAS45_16600 PF00326 Prolyl oligopeptidase family AMBAS45_16605 PF08000 Bacterial PH domain AMBAS45_16610 PF08448 PAS fold AMBAS45_16610 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_16610 PF00563 EAL domain AMBAS45_16615 PF00291 Pyridoxal-phosphate dependent enzyme AMBAS45_16620 PF07969 Amidohydrolase family AMBAS45_16630 PF00753 Metallo-beta-lactamase superfamily AMBAS45_16640 PF03466 LysR substrate binding domain AMBAS45_16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_16645 PF13230 Glutamine amidotransferases class-II AMBAS45_16660 PF05360 yiaA/B two helix domain AMBAS45_16690 PF09905 DNA-binding protein VF530 AMBAS45_16695 PF02447 GntP family permease AMBAS45_16705 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_16710 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMBAS45_16710 PF00753 Metallo-beta-lactamase superfamily AMBAS45_16720 PF11798 IMS family HHH motif AMBAS45_16720 PF11799 impB/mucB/samB family C-terminal domain AMBAS45_16720 PF00817 impB/mucB/samB family AMBAS45_16730 PF02424 ApbE family AMBAS45_16735 PF00970 Oxidoreductase FAD-binding domain AMBAS45_16735 PF00175 Oxidoreductase NAD-binding domain AMBAS45_16735 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBAS45_16740 PF02508 Rnf-Nqr subunit, membrane protein AMBAS45_16745 PF02508 Rnf-Nqr subunit, membrane protein AMBAS45_16750 PF04205 FMN-binding domain AMBAS45_16755 PF03116 NQR2, RnfD, RnfE family AMBAS45_16760 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AMBAS45_16760 PF11973 NQRA C-terminal domain AMBAS45_16765 PF07055 Enoyl reductase FAD binding domain AMBAS45_16765 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMBAS45_16765 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMBAS45_16770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBAS45_16770 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMBAS45_16775 PF00311 Phosphoenolpyruvate carboxylase AMBAS45_16780 PF00056 lactate/malate dehydrogenase, NAD binding domain AMBAS45_16780 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMBAS45_16785 PF01316 Arginine repressor, DNA binding domain AMBAS45_16785 PF02863 Arginine repressor, C-terminal domain AMBAS45_16795 PF00593 TonB dependent receptor AMBAS45_16810 PF00485 Phosphoribulokinase / Uridine kinase family AMBAS45_16815 PF07662 Na+ dependent nucleoside transporter C-terminus AMBAS45_16815 PF07670 Nucleoside recognition AMBAS45_16815 PF01773 Na+ dependent nucleoside transporter N-terminus AMBAS45_16830 PF02469 Fasciclin domain AMBAS45_16840 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_16840 PF00072 Response regulator receiver domain AMBAS45_16850 PF00571 CBS domain AMBAS45_16855 PF00474 Sodium:solute symporter family AMBAS45_16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_16865 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMBAS45_16865 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_16875 PF08443 RimK-like ATP-grasp domain AMBAS45_16875 PF18030 RimK PreATP-grasp domain AMBAS45_16885 PF18030 RimK PreATP-grasp domain AMBAS45_16885 PF08443 RimK-like ATP-grasp domain AMBAS45_16895 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_16895 PF00072 Response regulator receiver domain AMBAS45_16910 PF02690 Na+/Pi-cotransporter AMBAS45_16915 PF00248 Aldo/keto reductase family AMBAS45_16925 PF00082 Subtilase family AMBAS45_16940 PF00069 Protein kinase domain AMBAS45_16945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_16945 PF07730 Histidine kinase AMBAS45_16950 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_16950 PF00072 Response regulator receiver domain AMBAS45_16965 PF00082 Subtilase family AMBAS45_16980 PF00199 Catalase AMBAS45_16980 PF06628 Catalase-related immune-responsive AMBAS45_16990 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_16990 PF00563 EAL domain AMBAS45_16990 PF08448 PAS fold AMBAS45_16990 PF08447 PAS fold AMBAS45_17000 PF03144 Elongation factor Tu domain 2 AMBAS45_17000 PF00009 Elongation factor Tu GTP binding domain AMBAS45_17000 PF03143 Elongation factor Tu C-terminal domain AMBAS45_17005 PF03309 Type III pantothenate kinase AMBAS45_17010 PF08279 HTH domain AMBAS45_17010 PF02237 Biotin protein ligase C terminal domain AMBAS45_17010 PF03099 Biotin/lipoate A/B protein ligase family AMBAS45_17015 PF01565 FAD binding domain AMBAS45_17015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMBAS45_17020 PF12729 Four helix bundle sensory module for signal transduction AMBAS45_17020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_17020 PF00672 HAMP domain AMBAS45_17040 PF03412 Peptidase C39 family AMBAS45_17040 PF00664 ABC transporter transmembrane region AMBAS45_17040 PF00005 ABC transporter AMBAS45_17045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_17045 PF03466 LysR substrate binding domain AMBAS45_17060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMBAS45_17060 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMBAS45_17060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMBAS45_17065 PF00535 Glycosyl transferase family 2 AMBAS45_17070 PF16363 GDP-mannose 4,6 dehydratase AMBAS45_17075 PF04321 RmlD substrate binding domain AMBAS45_17080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMBAS45_17085 PF00483 Nucleotidyl transferase AMBAS45_17100 PF00535 Glycosyl transferase family 2 AMBAS45_17105 PF00535 Glycosyl transferase family 2 AMBAS45_17115 PF00535 Glycosyl transferase family 2 AMBAS45_17130 PF00535 Glycosyl transferase family 2 AMBAS45_17145 PF00132 Bacterial transferase hexapeptide (six repeats) AMBAS45_17145 PF14602 Hexapeptide repeat of succinyl-transferase AMBAS45_17145 PF12804 MobA-like NTP transferase domain AMBAS45_17150 PF01050 Mannose-6-phosphate isomerase AMBAS45_17150 PF00483 Nucleotidyl transferase AMBAS45_17155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMBAS45_17155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMBAS45_17155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMBAS45_17155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMBAS45_17160 PF00700 Bacterial flagellin C-terminal helical region AMBAS45_17160 PF00669 Bacterial flagellin N-terminal helical region AMBAS45_17170 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AMBAS45_17175 PF01196 Ribosomal protein L17 AMBAS45_17180 PF01000 RNA polymerase Rpb3/RpoA insert domain AMBAS45_17180 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMBAS45_17180 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMBAS45_17185 PF01479 S4 domain AMBAS45_17185 PF00163 Ribosomal protein S4/S9 N-terminal domain AMBAS45_17190 PF00411 Ribosomal protein S11 AMBAS45_17195 PF00416 Ribosomal protein S13/S18 AMBAS45_17200 PF00444 Ribosomal protein L36 AMBAS45_17205 PF00344 SecY translocase AMBAS45_17210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMBAS45_17215 PF00327 Ribosomal protein L30p/L7e AMBAS45_17220 PF00333 Ribosomal protein S5, N-terminal domain AMBAS45_17220 PF03719 Ribosomal protein S5, C-terminal domain AMBAS45_17225 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMBAS45_17230 PF00347 Ribosomal protein L6 AMBAS45_17235 PF00410 Ribosomal protein S8 AMBAS45_17240 PF00253 Ribosomal protein S14p/S29e AMBAS45_17245 PF00673 ribosomal L5P family C-terminus AMBAS45_17245 PF00281 Ribosomal protein L5 AMBAS45_17250 PF00467 KOW motif AMBAS45_17250 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMBAS45_17255 PF00238 Ribosomal protein L14p/L23e AMBAS45_17260 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_17260 PF09308 LuxQ, periplasmic AMBAS45_17260 PF00072 Response regulator receiver domain AMBAS45_17290 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMBAS45_17290 PF00588 SpoU rRNA Methylase family AMBAS45_17295 PF00575 S1 RNA binding domain AMBAS45_17295 PF17876 Cold shock domain AMBAS45_17295 PF08461 Ribonuclease R winged-helix domain AMBAS45_17295 PF08206 Ribonuclease B OB domain AMBAS45_17295 PF00773 RNB domain AMBAS45_17300 PF09423 PhoD-like phosphatase AMBAS45_17300 PF16655 PhoD-like phosphatase, N-terminal domain AMBAS45_17315 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_17315 PF00593 TonB dependent receptor AMBAS45_17330 PF08238 Sel1 repeat AMBAS45_17340 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AMBAS45_17345 PF00970 Oxidoreductase FAD-binding domain AMBAS45_17345 PF00175 Oxidoreductase NAD-binding domain AMBAS45_17355 PF04389 Peptidase family M28 AMBAS45_17365 PF01590 GAF domain AMBAS45_17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_17365 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_17365 PF08446 PAS fold AMBAS45_17365 PF00360 Phytochrome region AMBAS45_17375 PF01654 Cytochrome bd terminal oxidase subunit I AMBAS45_17380 PF02322 Cytochrome bd terminal oxidase subunit II AMBAS45_17400 PF01037 Lrp/AsnC ligand binding domain AMBAS45_17400 PF13404 AsnC-type helix-turn-helix domain AMBAS45_17410 PF00313 'Cold-shock' DNA-binding domain AMBAS45_17415 PF03109 ABC1 family AMBAS45_17425 PF01209 ubiE/COQ5 methyltransferase family AMBAS45_17435 PF01432 Peptidase family M3 AMBAS45_17440 PF00072 Response regulator receiver domain AMBAS45_17450 PF00072 Response regulator receiver domain AMBAS45_17450 PF13188 PAS domain AMBAS45_17450 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_17450 PF08448 PAS fold AMBAS45_17450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_17455 PF00072 Response regulator receiver domain AMBAS45_17455 PF00158 Sigma-54 interaction domain AMBAS45_17455 PF02954 Bacterial regulatory protein, Fis family AMBAS45_17460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_17460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMBAS45_17465 PF00384 Molybdopterin oxidoreductase AMBAS45_17465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMBAS45_17465 PF01568 Molydopterin dinucleotide binding domain AMBAS45_17470 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_17470 PF00593 TonB dependent receptor AMBAS45_17480 PF07676 WD40-like Beta Propeller Repeat AMBAS45_17480 PF00326 Prolyl oligopeptidase family AMBAS45_17535 PF00664 ABC transporter transmembrane region AMBAS45_17535 PF00005 ABC transporter AMBAS45_17535 PF03412 Peptidase C39 family AMBAS45_17540 PF00196 Bacterial regulatory proteins, luxR family AMBAS45_17540 PF00072 Response regulator receiver domain AMBAS45_17565 PF00004 ATPase family associated with various cellular activities (AAA) AMBAS45_17565 PF07724 AAA domain (Cdc48 subfamily) AMBAS45_17570 PF00227 Proteasome subunit AMBAS45_17575 PF00313 'Cold-shock' DNA-binding domain AMBAS45_17585 PF05036 Sporulation related domain AMBAS45_17590 PF00271 Helicase conserved C-terminal domain AMBAS45_17590 PF17764 3′ DNA-binding domain (3′BD) AMBAS45_17590 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMBAS45_17590 PF18074 Primosomal protein N C-terminal domain AMBAS45_17590 PF00270 DEAD/DEAH box helicase AMBAS45_17595 PF01197 Ribosomal protein L31 AMBAS45_17610 PF00390 Malic enzyme, N-terminal domain AMBAS45_17610 PF03949 Malic enzyme, NAD binding domain AMBAS45_17615 PF01340 Met Apo-repressor, MetJ AMBAS45_17620 PF02219 Methylenetetrahydrofolate reductase AMBAS45_17625 PF03631 Virulence factor BrkB AMBAS45_17640 PF00561 alpha/beta hydrolase fold AMBAS45_17645 PF02580 D-Tyr-tRNA(Tyr) deacylase AMBAS45_17650 PF00583 Acetyltransferase (GNAT) family AMBAS45_17650 PF09500 Putative thioesterase (yiiD_Cterm) AMBAS45_17655 PF04542 Sigma-70 region 2 AMBAS45_17655 PF00140 Sigma-70 factor, region 1.2 AMBAS45_17655 PF04545 Sigma-70, region 4 AMBAS45_17660 PF00563 EAL domain AMBAS45_17660 PF08668 HDOD domain AMBAS45_17665 PF08668 HDOD domain AMBAS45_17665 PF00563 EAL domain AMBAS45_17670 PF18075 FtsX extracellular domain AMBAS45_17675 PF00005 ABC transporter AMBAS45_17680 PF00448 SRP54-type protein, GTPase domain AMBAS45_17680 PF02881 SRP54-type protein, helical bundle domain AMBAS45_17695 PF01914 MarC family integral membrane protein AMBAS45_17705 PF00883 Cytosol aminopeptidase family, catalytic domain AMBAS45_17705 PF12404 Peptidase AMBAS45_17710 PF03749 Sugar fermentation stimulation protein RE domain AMBAS45_17710 PF17746 SfsA N-terminal OB domain AMBAS45_17715 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMBAS45_17720 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMBAS45_17725 PF12627 Probable RNA and SrmB- binding site of polymerase A AMBAS45_17725 PF12626 Polymerase A arginine-rich C-terminus AMBAS45_17725 PF01743 Poly A polymerase head domain AMBAS45_17730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMBAS45_17735 PF02548 Ketopantoate hydroxymethyltransferase AMBAS45_17740 PF02569 Pantoate-beta-alanine ligase AMBAS45_17745 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMBAS45_17760 PF01061 ABC-2 type transporter AMBAS45_17765 PF00005 ABC transporter AMBAS45_17770 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_17770 PF00072 Response regulator receiver domain AMBAS45_17775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_17775 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_17775 PF00672 HAMP domain AMBAS45_17795 PF00571 CBS domain AMBAS45_17795 PF01595 Cyclin M transmembrane N-terminal domain AMBAS45_17800 PF03773 Predicted permease AMBAS45_17805 PF13722 5TM C-terminal transporter carbon starvation CstA AMBAS45_17805 PF02554 Carbon starvation protein CstA AMBAS45_17810 PF00175 Oxidoreductase NAD-binding domain AMBAS45_17810 PF00258 Flavodoxin AMBAS45_17810 PF00667 FAD binding domain AMBAS45_17855 PF02472 Biopolymer transport protein ExbD/TolR AMBAS45_17865 PF01618 MotA/TolQ/ExbB proton channel family AMBAS45_17875 PF00593 TonB dependent receptor AMBAS45_17875 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_17880 PF01070 FMN-dependent dehydrogenase AMBAS45_17885 PF18331 PKHD-type hydroxylase C-terminal domain AMBAS45_17885 PF13640 2OG-Fe(II) oxygenase superfamily AMBAS45_17890 PF00593 TonB dependent receptor AMBAS45_17890 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_17895 PF07859 alpha/beta hydrolase fold AMBAS45_17905 PF03144 Elongation factor Tu domain 2 AMBAS45_17905 PF03143 Elongation factor Tu C-terminal domain AMBAS45_17905 PF00009 Elongation factor Tu GTP binding domain AMBAS45_17910 PF03144 Elongation factor Tu domain 2 AMBAS45_17910 PF00009 Elongation factor Tu GTP binding domain AMBAS45_17910 PF03143 Elongation factor Tu C-terminal domain AMBAS45_17915 PF00009 Elongation factor Tu GTP binding domain AMBAS45_17915 PF03144 Elongation factor Tu domain 2 AMBAS45_17915 PF14492 Elongation Factor G, domain II AMBAS45_17915 PF00679 Elongation factor G C-terminus AMBAS45_17915 PF03764 Elongation factor G, domain IV AMBAS45_17920 PF00177 Ribosomal protein S7p/S5e AMBAS45_17925 PF00164 Ribosomal protein S12/S23 AMBAS45_17930 PF04997 RNA polymerase Rpb1, domain 1 AMBAS45_17930 PF05000 RNA polymerase Rpb1, domain 4 AMBAS45_17930 PF04998 RNA polymerase Rpb1, domain 5 AMBAS45_17930 PF04983 RNA polymerase Rpb1, domain 3 AMBAS45_17930 PF00623 RNA polymerase Rpb1, domain 2 AMBAS45_17935 PF00562 RNA polymerase Rpb2, domain 6 AMBAS45_17935 PF04560 RNA polymerase Rpb2, domain 7 AMBAS45_17935 PF04563 RNA polymerase beta subunit AMBAS45_17935 PF04565 RNA polymerase Rpb2, domain 3 AMBAS45_17935 PF04561 RNA polymerase Rpb2, domain 2 AMBAS45_17935 PF10385 RNA polymerase beta subunit external 1 domain AMBAS45_17945 PF00466 Ribosomal protein L10 AMBAS45_17950 PF00687 Ribosomal protein L1p/L10e family AMBAS45_17955 PF00298 Ribosomal protein L11, RNA binding domain AMBAS45_17955 PF03946 Ribosomal protein L11, N-terminal domain AMBAS45_17960 PF02357 Transcription termination factor nusG AMBAS45_17960 PF00467 KOW motif AMBAS45_17965 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMBAS45_17970 PF00664 ABC transporter transmembrane region AMBAS45_17970 PF00005 ABC transporter AMBAS45_17975 PF03737 Aldolase/RraA AMBAS45_17980 PF05649 Peptidase family M13 AMBAS45_17980 PF01431 Peptidase family M13 AMBAS45_17995 PF00271 Helicase conserved C-terminal domain AMBAS45_17995 PF00270 DEAD/DEAH box helicase AMBAS45_17995 PF03880 DbpA RNA binding domain AMBAS45_18005 PF01979 Amidohydrolase family AMBAS45_18010 PF08212 Lipocalin-like domain AMBAS45_18015 PF00248 Aldo/keto reductase family AMBAS45_18020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBAS45_18025 PF00924 Mechanosensitive ion channel AMBAS45_18025 PF05552 Conserved TM helix AMBAS45_18030 PF07690 Major Facilitator Superfamily AMBAS45_18035 PF00128 Alpha amylase, catalytic domain AMBAS45_18045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMBAS45_18055 PF01227 GTP cyclohydrolase I AMBAS45_18065 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMBAS45_18070 PF00795 Carbon-nitrogen hydrolase AMBAS45_18080 PF00271 Helicase conserved C-terminal domain AMBAS45_18080 PF08494 DEAD/H associated AMBAS45_18080 PF00270 DEAD/DEAH box helicase AMBAS45_18085 PF04235 Protein of unknown function (DUF418) AMBAS45_18105 PF04679 ATP dependent DNA ligase C terminal region AMBAS45_18105 PF01068 ATP dependent DNA ligase domain AMBAS45_18105 PF04675 DNA ligase N terminus AMBAS45_18110 PF01132 Elongation factor P (EF-P) OB domain AMBAS45_18110 PF09285 Elongation factor P, C-terminal AMBAS45_18110 PF08207 Elongation factor P (EF-P) KOW-like domain AMBAS45_18115 PF00294 pfkB family carbohydrate kinase AMBAS45_18135 PF03466 LysR substrate binding domain AMBAS45_18135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_18140 PF00326 Prolyl oligopeptidase family AMBAS45_18145 PF02798 Glutathione S-transferase, N-terminal domain AMBAS45_18145 PF00043 Glutathione S-transferase, C-terminal domain AMBAS45_18150 PF02798 Glutathione S-transferase, N-terminal domain AMBAS45_18160 PF00561 alpha/beta hydrolase fold AMBAS45_18175 PF00171 Aldehyde dehydrogenase family AMBAS45_18180 PF00205 Thiamine pyrophosphate enzyme, central domain AMBAS45_18180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMBAS45_18180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMBAS45_18195 PF00762 Ferrochelatase AMBAS45_18200 PF03806 AbgT putative transporter family AMBAS45_18205 PF01145 SPFH domain / Band 7 family AMBAS45_18210 PF12221 Bacterial membrane protein N terminal AMBAS45_18210 PF01145 SPFH domain / Band 7 family AMBAS45_18215 PF01926 50S ribosome-binding GTPase AMBAS45_18215 PF16360 GTP-binding GTPase Middle Region AMBAS45_18215 PF13167 GTP-binding GTPase N-terminal AMBAS45_18220 PF17209 Hfq protein AMBAS45_18230 PF01119 DNA mismatch repair protein, C-terminal domain AMBAS45_18230 PF08676 MutL C terminal dimerisation domain AMBAS45_18235 PF01520 N-acetylmuramoyl-L-alanine amidase AMBAS45_18240 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMBAS45_18245 PF03853 YjeF-related protein N-terminus AMBAS45_18245 PF01256 Carbohydrate kinase AMBAS45_18250 PF08331 Domain of unknown function (DUF1730) AMBAS45_18260 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMBAS45_18265 PF09297 NADH pyrophosphatase zinc ribbon domain AMBAS45_18265 PF00293 NUDIX domain AMBAS45_18270 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AMBAS45_18275 PF01475 Ferric uptake regulator family AMBAS45_18285 PF01894 Uncharacterised protein family UPF0047 AMBAS45_18290 PF00691 OmpA family AMBAS45_18290 PF05736 OprF membrane domain AMBAS45_18295 PF03796 DnaB-like helicase C terminal domain AMBAS45_18295 PF00772 DnaB-like helicase N terminal domain AMBAS45_18305 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMBAS45_18330 PF03475 3-alpha domain AMBAS45_18330 PF03473 MOSC domain AMBAS45_18340 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_18340 PF00072 Response regulator receiver domain AMBAS45_18345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_18345 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_18345 PF16750 Sensor domain of 2-component histidine kinase AMBAS45_18345 PF00672 HAMP domain AMBAS45_18365 PF00873 AcrB/AcrD/AcrF family AMBAS45_18370 PF03948 Ribosomal protein L9, C-terminal domain AMBAS45_18370 PF01281 Ribosomal protein L9, N-terminal domain AMBAS45_18375 PF01084 Ribosomal protein S18 AMBAS45_18380 PF01250 Ribosomal protein S6 AMBAS45_18390 PF00005 ABC transporter AMBAS45_18400 PF08447 PAS fold AMBAS45_18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_18405 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_18405 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBAS45_18405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_18410 PF00672 HAMP domain AMBAS45_18410 PF02743 Cache domain AMBAS45_18410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBAS45_18425 PF03601 Conserved hypothetical protein 698 AMBAS45_18430 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMBAS45_18435 PF00248 Aldo/keto reductase family AMBAS45_18455 PF00474 Sodium:solute symporter family AMBAS45_18460 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_18460 PF00593 TonB dependent receptor AMBAS45_18465 PF16916 Dimerisation domain of Zinc Transporter AMBAS45_18465 PF01545 Cation efflux family AMBAS45_18470 PF00722 Glycosyl hydrolases family 16 AMBAS45_18480 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_18480 PF08448 PAS fold AMBAS45_18490 PF00933 Glycosyl hydrolase family 3 N terminal domain AMBAS45_18490 PF14310 Fibronectin type III-like domain AMBAS45_18490 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMBAS45_18495 PF07690 Major Facilitator Superfamily AMBAS45_18500 PF00232 Glycosyl hydrolase family 1 AMBAS45_18505 PF00356 Bacterial regulatory proteins, lacI family AMBAS45_18510 PF00083 Sugar (and other) transporter AMBAS45_18515 PF00005 ABC transporter AMBAS45_18515 PF00664 ABC transporter transmembrane region AMBAS45_18520 PF00005 ABC transporter AMBAS45_18520 PF00664 ABC transporter transmembrane region AMBAS45_18525 PF08173 Membrane bound YbgT-like protein AMBAS45_18530 PF02322 Cytochrome bd terminal oxidase subunit II AMBAS45_18535 PF01654 Cytochrome bd terminal oxidase subunit I AMBAS45_18545 PF00158 Sigma-54 interaction domain AMBAS45_18545 PF00072 Response regulator receiver domain AMBAS45_18545 PF02954 Bacterial regulatory protein, Fis family AMBAS45_18570 PF13474 SnoaL-like domain AMBAS45_18580 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_18580 PF00593 TonB dependent receptor AMBAS45_18595 PF02649 Type I GTP cyclohydrolase folE2 AMBAS45_18640 PF05532 CsbD-like AMBAS45_18655 PF08281 Sigma-70, region 4 AMBAS45_18655 PF04542 Sigma-70 region 2 AMBAS45_18680 PF00472 RF-1 domain AMBAS45_18685 PF00364 Biotin-requiring enzyme AMBAS45_18685 PF00561 alpha/beta hydrolase fold AMBAS45_18710 PF01292 Prokaryotic cytochrome b561 AMBAS45_18715 PF04264 YceI-like domain AMBAS45_18720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBAS45_18725 PF00593 TonB dependent receptor AMBAS45_18725 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_18735 PF01048 Phosphorylase superfamily AMBAS45_18740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_18740 PF03466 LysR substrate binding domain AMBAS45_18745 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMBAS45_18750 PF00107 Zinc-binding dehydrogenase AMBAS45_18750 PF16884 N-terminal domain of oxidoreductase AMBAS45_18755 PF00360 Phytochrome region AMBAS45_18755 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_18755 PF00563 EAL domain AMBAS45_18755 PF01590 GAF domain AMBAS45_18760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_18760 PF09308 LuxQ, periplasmic AMBAS45_18760 PF00072 Response regulator receiver domain AMBAS45_18760 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_18770 PF00296 Luciferase-like monooxygenase AMBAS45_18775 PF01380 SIS domain AMBAS45_18780 PF00455 DeoR C terminal sensor domain AMBAS45_18780 PF08220 DeoR-like helix-turn-helix domain AMBAS45_18785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMBAS45_18785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMBAS45_18790 PF12804 MobA-like NTP transferase domain AMBAS45_18790 PF14602 Hexapeptide repeat of succinyl-transferase AMBAS45_18790 PF00132 Bacterial transferase hexapeptide (six repeats) AMBAS45_18800 PF00892 EamA-like transporter family AMBAS45_18805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMBAS45_18805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMBAS45_18810 PF00730 HhH-GPD superfamily base excision DNA repair protein AMBAS45_18810 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AMBAS45_18815 PF00144 Beta-lactamase AMBAS45_18820 PF17810 Arginine decarboxylase helical bundle domain AMBAS45_18820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMBAS45_18820 PF17944 Arginine decarboxylase C-terminal helical extension AMBAS45_18830 PF02233 NAD(P) transhydrogenase beta subunit AMBAS45_18835 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMBAS45_18840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMBAS45_18840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMBAS45_18880 PF07715 TonB-dependent Receptor Plug Domain AMBAS45_18880 PF00593 TonB dependent receptor AMBAS45_18920 PF01040 UbiA prenyltransferase family AMBAS45_18925 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AMBAS45_18930 PF00510 Cytochrome c oxidase subunit III AMBAS45_18935 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMBAS45_18940 PF06481 COX Aromatic Rich Motif AMBAS45_18940 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMBAS45_18970 PF00118 TCP-1/cpn60 chaperonin family AMBAS45_18975 PF00166 Chaperonin 10 Kd subunit AMBAS45_18985 PF03091 CutA1 divalent ion tolerance protein AMBAS45_18990 PF02683 Cytochrome C biogenesis protein transmembrane region AMBAS45_18990 PF11412 Disulphide bond corrector protein DsbC AMBAS45_18995 PF01551 Peptidase family M23 AMBAS45_19000 PF01220 Dehydroquinase class II AMBAS45_19005 PF00364 Biotin-requiring enzyme AMBAS45_19010 PF00289 Biotin carboxylase, N-terminal domain AMBAS45_19010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMBAS45_19010 PF02785 Biotin carboxylase C-terminal domain AMBAS45_19020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AMBAS45_19040 PF11490 DNA polymerase III polC-type N-terminus II AMBAS45_19040 PF00929 Exonuclease AMBAS45_19040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMBAS45_19040 PF14579 Helix-hairpin-helix motif AMBAS45_19040 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMBAS45_19040 PF02811 PHP domain AMBAS45_19060 PF01355 High potential iron-sulfur protein AMBAS45_19065 PF01425 Amidase AMBAS45_19080 PF01207 Dihydrouridine synthase (Dus) AMBAS45_19085 PF02954 Bacterial regulatory protein, Fis family AMBAS45_19090 PF01808 AICARFT/IMPCHase bienzyme AMBAS45_19090 PF02142 MGS-like domain AMBAS45_19100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMBAS45_19100 PF02843 Phosphoribosylglycinamide synthetase, C domain AMBAS45_19100 PF02844 Phosphoribosylglycinamide synthetase, N domain AMBAS45_19110 PF00027 Cyclic nucleotide-binding domain AMBAS45_19110 PF00520 Ion transport protein AMBAS45_19115 PF00485 Phosphoribulokinase / Uridine kinase family AMBAS45_19125 PF00072 Response regulator receiver domain AMBAS45_19125 PF00486 Transcriptional regulatory protein, C terminal AMBAS45_19130 PF00512 His Kinase A (phospho-acceptor) domain AMBAS45_19130 PF00672 HAMP domain AMBAS45_19130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBAS45_19140 PF01055 Glycosyl hydrolases family 31 AMBAS45_19140 PF13802 Galactose mutarotase-like AMBAS45_19140 PF17137 Domain of unknown function (DUF5110) AMBAS45_19140 PF16338 Domain of unknown function (DUF4968) AMBAS45_19155 PF01430 Hsp33 protein AMBAS45_19160 PF01479 S4 domain AMBAS45_19165 PF11356 Type II secretion system protein C AMBAS45_19170 PF00263 Bacterial type II and III secretion system protein AMBAS45_19170 PF03958 Bacterial type II/III secretion system short domain AMBAS45_19175 PF00437 Type II/IV secretion system protein AMBAS45_19180 PF00482 Type II secretion system (T2SS), protein F AMBAS45_19185 PF07963 Prokaryotic N-terminal methylation motif AMBAS45_19185 PF08334 Type II secretion system (T2SS), protein G AMBAS45_19190 PF12019 Type II transport protein GspH AMBAS45_19195 PF07963 Prokaryotic N-terminal methylation motif AMBAS45_19195 PF02501 Type II secretion system (T2SS), protein I AMBAS45_19200 PF07963 Prokaryotic N-terminal methylation motif AMBAS45_19200 PF11612 Type II secretion system (T2SS), protein J AMBAS45_19210 PF12693 GspL periplasmic domain AMBAS45_19210 PF05134 Type II secretion system (T2SS), protein L AMBAS45_19215 PF04612 Type II secretion system (T2SS), protein M AMBAS45_19230 PF12706 Beta-lactamase superfamily domain AMBAS45_19235 PF00171 Aldehyde dehydrogenase family AMBAS45_19240 PF01931 Protein of unknown function DUF84 AMBAS45_19245 PF13419 Haloacid dehalogenase-like hydrolase AMBAS45_19250 PF00293 NUDIX domain AMBAS45_19255 PF00459 Inositol monophosphatase family AMBAS45_19270 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMBAS45_19280 PF06794 Uncharacterised protein family (UPF0270) AMBAS45_19285 PF00561 alpha/beta hydrolase fold AMBAS45_19305 PF12848 ABC transporter AMBAS45_19305 PF00005 ABC transporter AMBAS45_19325 PF04102 SlyX AMBAS45_19335 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMBAS45_19335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBAS45_19345 PF03449 Transcription elongation factor, N-terminal AMBAS45_19345 PF01272 Transcription elongation factor, GreA/GreB, C-term AMBAS45_19350 PF17674 HHH domain AMBAS45_19350 PF00575 S1 RNA binding domain AMBAS45_19350 PF16921 Tex protein YqgF-like domain AMBAS45_19350 PF09371 Tex-like protein N-terminal domain AMBAS45_19370 PF00561 alpha/beta hydrolase fold AMBAS45_19375 PF00156 Phosphoribosyl transferase domain AMBAS45_19385 PF01521 Iron-sulphur cluster biosynthesis AMBAS45_19385 PF01106 NifU-like domain AMBAS45_19395 PF01177 Asp/Glu/Hydantoin racemase AMBAS45_19410 PF01554 MatE AMBAS45_19425 PF02630 SCO1/SenC AMBAS45_19430 PF01040 UbiA prenyltransferase family AMBAS45_19435 PF02628 Cytochrome oxidase assembly protein AMBAS45_19455 PF00510 Cytochrome c oxidase subunit III AMBAS45_19460 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMBAS45_19465 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMBAS45_19470 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMBAS45_19470 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMBAS45_19475 PF01726 LexA DNA binding domain AMBAS45_19475 PF00717 Peptidase S24-like AMBAS45_19480 PF00990 Diguanylate cyclase, GGDEF domain AMBAS45_19485 PF01553 Acyltransferase AMBAS45_19490 PF00585 C-terminal regulatory domain of Threonine dehydratase AMBAS45_19490 PF00291 Pyridoxal-phosphate dependent enzyme AMBAS45_19495 PF00920 Dehydratase family AMBAS45_19500 PF03458 UPF0126 domain AMBAS45_19505 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMBAS45_19505 PF01078 Magnesium chelatase, subunit ChlI AMBAS45_19510 PF03466 LysR substrate binding domain AMBAS45_19510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBAS45_19515 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMBAS45_19515 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMBAS45_19520 PF07690 Major Facilitator Superfamily AMBAS45_19525 PF00326 Prolyl oligopeptidase family AMBAS45_19530 PF07244 Surface antigen variable number repeat AMBAS45_19530 PF01103 Surface antigen AMBAS45_19530 PF17243 POTRA domain TamA domain 1 AMBAS45_19535 PF04357 TamB, inner membrane protein subunit of TAM complex AMBAS45_19560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMBAS45_19560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBAS45_19570 PF01472 PUA domain AMBAS45_19570 PF00696 Amino acid kinase family AMBAS45_19590 PF03109 ABC1 family AMBAS45_19615 PF01979 Amidohydrolase family AMBAS45_19640 PF01206 Sulfurtransferase TusA AMBAS45_19645 PF00156 Phosphoribosyl transferase domain AMBAS45_19650 PF03725 3' exoribonuclease family, domain 2 AMBAS45_19650 PF01138 3' exoribonuclease family, domain 1 AMBAS45_19655 PF03755 YicC-like family, N-terminal region AMBAS45_19655 PF08340 Domain of unknown function (DUF1732) AMBAS45_19675 PF06114 IrrE N-terminal-like domain AMBAS45_19690 PF11867 Domain of unknown function (DUF3387) AMBAS45_19690 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMBAS45_19690 PF18766 SWI2/SNF2 ATPase AMBAS45_19700 PF02384 N-6 DNA Methylase AMBAS45_19700 PF12161 HsdM N-terminal domain AMBAS45_19705 PF17191 RecG wedge domain AMBAS45_19705 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AMBAS45_19705 PF00270 DEAD/DEAH box helicase AMBAS45_19715 PF02384 N-6 DNA Methylase AMBAS45_20101 PF05973 Phage derived protein Gp49-like (DUF891)