locus-tag	class	description
AMBAS45_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AMBAS45_00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMBAS45_00020	COG0187	DNA topoisomerase II activity
AMBAS45_00035	COG3344	reverse transcriptase
AMBAS45_00055	COG2818	Glycosylase
AMBAS45_00065	COG3078	GTPase activator activity
AMBAS45_00085	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMBAS45_00085	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMBAS45_00090	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AMBAS45_00095	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AMBAS45_00100	COG0569	domain protein
AMBAS45_00105	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMBAS45_00105	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMBAS45_00110	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AMBAS45_00125	COG0758	DNA mediated transformation
AMBAS45_00140	COG0009	L-threonylcarbamoyladenylate synthase
AMBAS45_00145	COG0408	coproporphyrinogen oxidase activity
AMBAS45_00150	COG3047	cAMP biosynthetic process
AMBAS45_00165	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AMBAS45_00220	COG2234	aminopeptidase activity
AMBAS45_00230	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMBAS45_00255	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMBAS45_00285	COG3642	lipopolysaccharide core region biosynthetic process
AMBAS45_00315	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMBAS45_00330	COG3161	chorismate lyase activity
AMBAS45_00335	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AMBAS45_00345	COG0210	DNA helicase
AMBAS45_00375	COG1959	2 iron, 2 sulfur cluster binding
AMBAS45_00380	COG0730	response to heat
AMBAS45_00395	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AMBAS45_00460	COG0583	DNA-binding transcription factor activity
AMBAS45_00470	COG3106	COG3106 Predicted ATPase
AMBAS45_00485	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AMBAS45_00505	COG0352	thiamine-phosphate diphosphorylase activity
AMBAS45_00515	COG3071	HemY protein
AMBAS45_00520	COG2959	enzyme of heme biosynthesis
AMBAS45_00530	COG0181	hydroxymethylbilane synthase activity
AMBAS45_00535	COG3706	GGDEF domain
AMBAS45_00535	COG0745	RESPONSE REGULATOR receiver
AMBAS45_00545	COG0194	GDP metabolic process
AMBAS45_00555	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMBAS45_00565	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMBAS45_00570	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AMBAS45_00580	COG0678	peroxiredoxin activity
AMBAS45_00595	COG1178	ABC-type Fe3 transport system permease component
AMBAS45_00600	COG3842	ATPase activity
AMBAS45_00605	COG2081	HI0933 family
AMBAS45_00610	COG3047	cAMP biosynthetic process
AMBAS45_00625	COG2200	EAL domain
AMBAS45_00630	COG5001	Diguanylate cyclase
AMBAS45_00635	COG0583	DNA-binding transcription factor activity
AMBAS45_00645	COG2076	Multidrug Resistance protein
AMBAS45_00665	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMBAS45_00680	COG0427	acetyl-CoA hydrolase
AMBAS45_00685	COG0123	including yeast histone deacetylase and acetoin utilization protein
AMBAS45_00700	COG0840	transmembrane signaling receptor activity
AMBAS45_00710	COG3064	Membrane
AMBAS45_00720	COG5002	protein histidine kinase activity
AMBAS45_00720	COG5001	Diguanylate cyclase
AMBAS45_00735	COG0514	ATP-dependent DNA helicase (RecQ)
AMBAS45_00740	COG2050	protein possibly involved in aromatic compounds catabolism
AMBAS45_00745	COG2239	Acts as a magnesium transporter
AMBAS45_00750	COG2962	Rard protein
AMBAS45_00755	COG3706	GGDEF domain
AMBAS45_00760	COG0210	DNA helicase
AMBAS45_00770	COG3706	GGDEF domain
AMBAS45_00775	COG1011	Hydrolase
AMBAS45_00790	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AMBAS45_00795	COG0019	diaminopimelate decarboxylase activity
AMBAS45_00825	COG0163	prenyltransferase activity
AMBAS45_00830	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AMBAS45_00840	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AMBAS45_00875	COG1077	Cell shape determining protein MreB Mrl
AMBAS45_00885	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AMBAS45_00890	COG2814	Major facilitator Superfamily
AMBAS45_00895	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMBAS45_00925	COG1085	galactose-1-phosphate uridylyltransferase
AMBAS45_00930	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AMBAS45_00940	COG0629	single-stranded DNA binding
AMBAS45_00965	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMBAS45_00980	COG1349	DNA-binding transcription factor activity
AMBAS45_01025	COG3409	Peptidoglycan-binding domain 1 protein
AMBAS45_01025	COG3267	Type II secretory pathway component ExeA
AMBAS45_01035	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AMBAS45_01040	COG1459	type II secretion system
AMBAS45_01090	COG1077	Cell shape determining protein MreB Mrl
AMBAS45_01095	COG1792	Involved in formation and maintenance of cell shape
AMBAS45_01100	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AMBAS45_01110	COG1530	ribonuclease E activity
AMBAS45_01120	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AMBAS45_01125	COG0312	modulator of DNA gyrase
AMBAS45_01135	COG3028	Belongs to the UPF0307 family
AMBAS45_01140	COG0312	modulator of DNA gyrase
AMBAS45_01155	COG0745	RESPONSE REGULATOR receiver
AMBAS45_01160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMBAS45_01160	COG4191	Histidine kinase
AMBAS45_01165	COG0297	glycogen (starch) synthase activity
AMBAS45_01175	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AMBAS45_01185	COG1194	a g-specific adenine glycosylase
AMBAS45_01260	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AMBAS45_01270	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMBAS45_01280	COG0463	Glycosyl transferase, family 2
AMBAS45_01285	COG0745	RESPONSE REGULATOR receiver
AMBAS45_01290	COG5002	protein histidine kinase activity
AMBAS45_01320	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AMBAS45_01330	COG0789	Transcriptional regulator
AMBAS45_01335	COG2217	Heavy metal translocating P-type atpase
AMBAS45_01375	COG0531	amino acid
AMBAS45_01385	COG2132	Multicopper oxidase
AMBAS45_01425	COG0745	RESPONSE REGULATOR receiver
AMBAS45_01435	COG0835	chemotaxis
AMBAS45_01450	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AMBAS45_01465	COG0745	RESPONSE REGULATOR receiver
AMBAS45_01470	COG2198	Histidine kinase
AMBAS45_01470	COG0643	Histidine kinase
AMBAS45_01475	COG0835	chemotaxis
AMBAS45_01495	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AMBAS45_01555	COG0784	Response regulator, receiver
AMBAS45_01555	COG2205	protein histidine kinase activity
AMBAS45_01570	COG1609	Transcriptional regulator
AMBAS45_01575	COG0673	inositol 2-dehydrogenase activity
AMBAS45_01585	COG2211	Major facilitator Superfamily
AMBAS45_01610	COG1454	alcohol dehydrogenase
AMBAS45_01660	COG0089	rRNA binding
AMBAS45_01670	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AMBAS45_01680	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AMBAS45_01695	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AMBAS45_01705	COG1519	Transferase
AMBAS45_01750	COG0788	formyltetrahydrofolate deformylase activity
AMBAS45_01760	COG1643	Atp-dependent helicase
AMBAS45_01770	COG2951	lytic endotransglycosylase activity
AMBAS45_01775	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AMBAS45_01790	COG2354	Protein conserved in bacteria
AMBAS45_01800	COG4977	sequence-specific DNA binding
AMBAS45_01815	COG0004	ammonium transporteR
AMBAS45_01820	COG0405	Gamma-glutamyltransferase
AMBAS45_01825	COG2837	iron assimilation
AMBAS45_01845	COG0540	Belongs to the ATCase OTCase family
AMBAS45_01870	COG2205	protein histidine kinase activity
AMBAS45_01870	COG5002	protein histidine kinase activity
AMBAS45_01870	COG0784	Response regulator, receiver
AMBAS45_01885	COG3300	MHYT domain
AMBAS45_01885	COG5001	Diguanylate cyclase
AMBAS45_01895	COG1012	belongs to the aldehyde dehydrogenase family
AMBAS45_01905	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AMBAS45_01915	COG0512	Glutamine amidotransferase of anthranilate synthase
AMBAS45_01920	COG0180	Tryptophanyl-tRNA synthetase
AMBAS45_01925	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AMBAS45_01945	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AMBAS45_01955	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AMBAS45_01990	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AMBAS45_01995	COG0281	malic enzyme
AMBAS45_02005	COG0625	glutathione transferase activity
AMBAS45_02015	COG0753	catalase activity
AMBAS45_02055	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AMBAS45_02055	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AMBAS45_02065	COG0137	argininosuccinate synthase activity
AMBAS45_02085	COG1803	Methylglyoxal synthase
AMBAS45_02095	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
AMBAS45_02110	COG0745	RESPONSE REGULATOR receiver
AMBAS45_02115	COG2205	protein histidine kinase activity
AMBAS45_02120	COG2267	carboxylic ester hydrolase activity
AMBAS45_02125	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AMBAS45_02130	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMBAS45_02135	COG1136	(ABC) transporter
AMBAS45_02135	COG0577	efflux transmembrane transporter activity
AMBAS45_02150	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AMBAS45_02160	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AMBAS45_02165	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMBAS45_02170	COG4942	peptidase
AMBAS45_02175	COG2861	carbohydrate metabolic process
AMBAS45_02185	COG0584	glycerophosphoryl diester phosphodiesterase
AMBAS45_02200	COG1162	GTPase activity
AMBAS45_02205	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AMBAS45_02210	COG4771	TonB-dependent receptor
AMBAS45_02215	COG0457	Tetratricopeptide repeat
AMBAS45_02230	COG0028	Belongs to the TPP enzyme family
AMBAS45_02240	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMBAS45_02245	COG1288	antiporter activity
AMBAS45_02250	COG4206	TonB-dependent receptor
AMBAS45_02270	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AMBAS45_02275	COG0805	protein transport
AMBAS45_02285	COG0084	hydrolase, TatD family'
AMBAS45_02290	COG5001	Diguanylate cyclase
AMBAS45_02290	COG2203	Gaf domain
AMBAS45_02290	COG4251	negative regulation of phosphorylation
AMBAS45_02290	COG3706	GGDEF domain
AMBAS45_02300	COG0248	Ppx GppA phosphatase
AMBAS45_02305	COG0513	Belongs to the DEAD box helicase family
AMBAS45_02310	COG3118	belongs to the thioredoxin family
AMBAS45_02315	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AMBAS45_02330	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AMBAS45_02335	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AMBAS45_02340	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AMBAS45_02350	COG0783	Belongs to the Dps family
AMBAS45_02355	COG2133	pyrroloquinoline quinone binding
AMBAS45_02360	COG0823	Involved in the tonB-independent uptake of proteins
AMBAS45_02360	COG4946	Tricorn protease homolog
AMBAS45_02360	COG1506	peptidase
AMBAS45_02370	COG3118	belongs to the thioredoxin family
AMBAS45_02385	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AMBAS45_02400	COG1012	belongs to the aldehyde dehydrogenase family
AMBAS45_02425	COG1757	Na H antiporter
AMBAS45_02440	COG3876	Protein conserved in bacteria
AMBAS45_02445	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AMBAS45_02465	COG0346	lactoylglutathione lyase activity
AMBAS45_02500	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMBAS45_02510	COG2824	Alkylphosphonate utilization operon protein PhnA
AMBAS45_02515	COG0454	-acetyltransferase
AMBAS45_02525	COG1742	UPF0060 membrane protein
AMBAS45_02545	COG3878	Protein conserved in bacteria
AMBAS45_02600	COG0183	Belongs to the thiolase family
AMBAS45_02605	COG1024	Enoyl-CoA hydratase
AMBAS45_02605	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMBAS45_02610	COG0739	heme binding
AMBAS45_02610	COG0741	lytic transglycosylase activity
AMBAS45_02610	COG1196	nuclear chromosome segregation
AMBAS45_02615	COG0006	proline dipeptidase activity
AMBAS45_02625	COG0142	geranyltranstransferase activity
AMBAS45_02670	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AMBAS45_02675	COG1388	LysM domain
AMBAS45_02675	COG4942	peptidase
AMBAS45_02680	COG1238	metal cluster binding
AMBAS45_02690	COG0585	pseudouridine synthase activity
AMBAS45_02695	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AMBAS45_02705	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AMBAS45_02715	COG0840	transmembrane signaling receptor activity
AMBAS45_02725	COG0506	proline dehydrogenase activity
AMBAS45_02725	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AMBAS45_02725	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AMBAS45_02740	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMBAS45_02745	COG0745	RESPONSE REGULATOR receiver
AMBAS45_02750	COG5002	protein histidine kinase activity
AMBAS45_02775	COG0494	nUDIX hydrolase
AMBAS45_02780	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
AMBAS45_02785	COG0730	response to heat
AMBAS45_02790	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMBAS45_02795	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AMBAS45_02805	COG3706	GGDEF domain
AMBAS45_02810	COG2205	protein histidine kinase activity
AMBAS45_02810	COG3437	response regulator, receiver
AMBAS45_02810	COG3850	Histidine kinase
AMBAS45_02810	COG4999	Histidine kinase
AMBAS45_02815	COG2211	Major facilitator Superfamily
AMBAS45_02835	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMBAS45_02850	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AMBAS45_02855	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMBAS45_02880	COG1648	precorrin-2 dehydrogenase activity
AMBAS45_02880	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AMBAS45_02885	COG0513	Belongs to the DEAD box helicase family
AMBAS45_02905	COG1538	Outer membrane efflux protein
AMBAS45_02910	COG0494	nUDIX hydrolase
AMBAS45_02920	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AMBAS45_02925	COG3150	esterase
AMBAS45_02930	COG0187	DNA topoisomerase II activity
AMBAS45_02940	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMBAS45_02960	COG1509	lysine 2,3-aminomutase activity
AMBAS45_02990	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMBAS45_03005	COG0271	Belongs to the BolA IbaG family
AMBAS45_03020	COG3707	response regulator
AMBAS45_03035	COG0659	secondary active sulfate transmembrane transporter activity
AMBAS45_03040	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AMBAS45_03045	COG2146	nitrite reductase [NAD(P)H] activity
AMBAS45_03050	COG0243	molybdopterin cofactor binding
AMBAS45_03055	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AMBAS45_03055	COG1648	precorrin-2 dehydrogenase activity
AMBAS45_03065	COG0737	Belongs to the 5'-nucleotidase family
AMBAS45_03070	COG3706	GGDEF domain
AMBAS45_03070	COG0745	RESPONSE REGULATOR receiver
AMBAS45_03080	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AMBAS45_03080	COG1116	anion transmembrane transporter activity
AMBAS45_03090	COG1116	anion transmembrane transporter activity
AMBAS45_03105	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AMBAS45_03110	COG4206	TonB-dependent receptor
AMBAS45_03115	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AMBAS45_03120	COG0348	domain, Protein
AMBAS45_03135	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_03140	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_03150	COG4948	Mandelate Racemase Muconate Lactonizing
AMBAS45_03165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMBAS45_03170	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMBAS45_03190	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AMBAS45_03195	COG0358	DNA primase activity
AMBAS45_03225	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AMBAS45_03240	COG0537	adenosine 5'-monophosphoramidase activity
AMBAS45_03255	COG3135	benzoate transporter
AMBAS45_03260	COG1396	sequence-specific DNA binding
AMBAS45_03265	COG2974	May be involved in recombination
AMBAS45_03270	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMBAS45_03270	COG4191	Histidine kinase
AMBAS45_03275	COG0745	RESPONSE REGULATOR receiver
AMBAS45_03280	COG5002	protein histidine kinase activity
AMBAS45_03310	COG0811	peptide transport
AMBAS45_03315	COG0811	peptide transport
AMBAS45_03320	COG0848	biopolymer transport protein
AMBAS45_03325	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AMBAS45_03335	COG3437	response regulator, receiver
AMBAS45_03350	COG0318	PFAM AMP-dependent synthetase and ligase
AMBAS45_03360	COG2133	pyrroloquinoline quinone binding
AMBAS45_03365	COG1049	propionate catabolic process, 2-methylcitrate cycle
AMBAS45_03405	COG0527	aspartate kinase activity
AMBAS45_03415	COG0840	transmembrane signaling receptor activity
AMBAS45_03420	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AMBAS45_03425	COG2967	ApaG domain
AMBAS45_03435	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AMBAS45_03440	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMBAS45_03445	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AMBAS45_03455	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AMBAS45_03465	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AMBAS45_03470	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AMBAS45_03485	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AMBAS45_03500	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMBAS45_03505	COG3956	TIGRFAM MazG family protein
AMBAS45_03530	COG4771	TonB-dependent receptor
AMBAS45_03545	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_03555	COG0318	PFAM AMP-dependent synthetase and ligase
AMBAS45_03565	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMBAS45_03575	COG0463	Glycosyl transferase, family 2
AMBAS45_03595	COG0642	Histidine kinase
AMBAS45_03600	COG0745	RESPONSE REGULATOR receiver
AMBAS45_03615	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AMBAS45_03620	COG1595	DNA-templated transcription, initiation
AMBAS45_03630	COG4206	TonB-dependent receptor
AMBAS45_03640	COG1473	amidohydrolase
AMBAS45_03645	COG0723	plastoquinol--plastocyanin reductase activity
AMBAS45_03650	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AMBAS45_03655	COG2857	Cytochrome c1
AMBAS45_03660	COG0625	glutathione transferase activity
AMBAS45_03665	COG2969	positive regulation of protein catabolic process
AMBAS45_03680	COG0745	RESPONSE REGULATOR receiver
AMBAS45_03685	COG2239	Acts as a magnesium transporter
AMBAS45_03690	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMBAS45_03700	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMBAS45_03710	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AMBAS45_03715	COG1137	ATPase activity
AMBAS45_03720	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AMBAS45_03730	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AMBAS45_03745	COG1127	ABC transporter
AMBAS45_03750	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AMBAS45_03755	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AMBAS45_03760	COG2854	intermembrane phospholipid transfer
AMBAS45_03770	COG5007	Belongs to the BolA IbaG family
AMBAS45_03780	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMBAS45_03785	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMBAS45_03795	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AMBAS45_03835	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AMBAS45_03845	COG3537	Alpha-1,2-mannosidase
AMBAS45_03850	COG3537	Alpha-1,2-mannosidase
AMBAS45_03870	COG1609	Transcriptional regulator
AMBAS45_03885	COG2971	BadF BadG BcrA BcrD
AMBAS45_03890	COG1446	asparaginase
AMBAS45_03900	COG3142	Participates in the control of copper homeostasis
AMBAS45_03910	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMBAS45_03915	COG3537	Alpha-1,2-mannosidase
AMBAS45_03920	COG4771	TonB-dependent receptor
AMBAS45_03925	COG0697	spore germination
AMBAS45_03965	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AMBAS45_03975	COG0126	phosphoglycerate kinase activity
AMBAS45_03980	COG3588	fructose-bisphosphate aldolase
AMBAS45_04000	COG1538	Outer membrane efflux protein
AMBAS45_04010	COG4946	Tricorn protease homolog
AMBAS45_04010	COG0823	Involved in the tonB-independent uptake of proteins
AMBAS45_04010	COG1506	peptidase
AMBAS45_04020	COG0248	Ppx GppA phosphatase
AMBAS45_04025	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AMBAS45_04035	COG0573	inorganic phosphate transmembrane transporter activity
AMBAS45_04045	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AMBAS45_04055	COG0306	phosphate transporter
AMBAS45_04065	COG0583	DNA-binding transcription factor activity
AMBAS45_04090	COG1272	protein, Hemolysin III
AMBAS45_04100	COG1846	Transcriptional regulator
AMBAS45_04105	COG1764	response to oxidative stress
AMBAS45_04120	COG1739	Uncharacterized protein family UPF0029
AMBAS45_04140	COG0583	DNA-binding transcription factor activity
AMBAS45_04145	COG4989	oxidoreductase activity
AMBAS45_04155	COG0420	3'-5' exonuclease activity
AMBAS45_04160	COG0419	ATPase involved in DNA repair
AMBAS45_04170	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
AMBAS45_04195	COG2986	histidine ammonia-lyase
AMBAS45_04210	COG2971	BadF BadG BcrA BcrD
AMBAS45_04215	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMBAS45_04225	COG0488	(ABC) transporter
AMBAS45_04245	COG0668	transmembrane transport
AMBAS45_04255	COG2814	Major facilitator Superfamily
AMBAS45_04330	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AMBAS45_04340	COG0513	Belongs to the DEAD box helicase family
AMBAS45_04350	COG3267	Type II secretory pathway component ExeA
AMBAS45_04350	COG3409	Peptidoglycan-binding domain 1 protein
AMBAS45_04375	COG0473	3-isopropylmalate dehydrogenase activity
AMBAS45_04380	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMBAS45_04395	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMBAS45_04415	COG2271	Major facilitator Superfamily
AMBAS45_04420	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMBAS45_04430	COG2186	Transcriptional regulator
AMBAS45_04485	COG4555	ABC transporter
AMBAS45_04490	COG1668	transmembrane transport
AMBAS45_04505	COG4133	protoheme IX ABC transporter activity
AMBAS45_04510	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMBAS45_04515	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMBAS45_04520	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMBAS45_04530	COG1138	Cytochrome C-type biogenesis protein
AMBAS45_04550	COG2853	Lipoprotein
AMBAS45_04555	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AMBAS45_04565	COG3104	oligopeptide transport
AMBAS45_04595	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMBAS45_04610	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AMBAS45_04615	COG1596	polysaccharide export
AMBAS45_04615	COG1555	photosystem II stabilization
AMBAS45_04620	COG0473	3-isopropylmalate dehydrogenase activity
AMBAS45_04630	COG1611	Belongs to the LOG family
AMBAS45_04635	COG3706	GGDEF domain
AMBAS45_04635	COG0745	RESPONSE REGULATOR receiver
AMBAS45_04680	COG0564	pseudouridine synthase activity
AMBAS45_04695	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AMBAS45_04700	COG0024	Methionine aminopeptidase
AMBAS45_04705	COG0052	Belongs to the universal ribosomal protein uS2 family
AMBAS45_04715	COG0528	UMP kinase activity
AMBAS45_04725	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMBAS45_04730	COG0575	Belongs to the CDS family
AMBAS45_04755	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AMBAS45_04775	COG0587	DNA-directed DNA polymerase activity
AMBAS45_04780	COG0825	malonyl-CoA metabolic process
AMBAS45_04785	COG0037	tRNA processing
AMBAS45_04805	COG0590	tRNA wobble adenosine to inosine editing
AMBAS45_04820	COG0047	phosphoribosylformylglycinamidine synthase activity
AMBAS45_04820	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMBAS45_04825	COG2840	Smr protein MutS2
AMBAS45_04855	COG0835	chemotaxis
AMBAS45_04855	COG0784	Response regulator, receiver
AMBAS45_04860	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AMBAS45_04865	COG1815	bacterial-type flagellum-dependent cell motility
AMBAS45_04870	COG1558	bacterial-type flagellum-dependent cell motility
AMBAS45_04875	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AMBAS45_04880	COG1749	Flagellar hook protein flgE
AMBAS45_04885	COG4787	bacterial-type flagellum-dependent cell motility
AMBAS45_04890	COG4786	Flagellar basal body rod
AMBAS45_04905	COG3951	Flagellar rod assembly protein muramidase FlgJ
AMBAS45_04905	COG1705	Flagellar rod assembly protein muramidase FlgJ
AMBAS45_04910	COG1256	bacterial-type flagellum assembly
AMBAS45_04935	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AMBAS45_04945	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
AMBAS45_04980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMBAS45_05005	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AMBAS45_05010	COG1086	Polysaccharide biosynthesis protein
AMBAS45_05025	COG3475	LICD family
AMBAS45_05030	COG2089	acid synthase
AMBAS45_05040	COG1083	cytidylyl-transferase
AMBAS45_05045	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AMBAS45_05055	COG2204	response regulator
AMBAS45_05060	COG3852	Histidine kinase
AMBAS45_05065	COG2204	response regulator
AMBAS45_05070	COG1677	Flagellar hook-basal body complex protein FliE
AMBAS45_05075	COG1766	The M ring may be actively involved in energy transduction
AMBAS45_05080	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AMBAS45_05130	COG1987	bacterial-type flagellum assembly
AMBAS45_05150	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AMBAS45_05160	COG0455	bacterial-type flagellum organization
AMBAS45_05175	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
AMBAS45_05180	COG2198	Histidine kinase
AMBAS45_05180	COG0643	Histidine kinase
AMBAS45_05190	COG1192	Involved in chromosome partitioning
AMBAS45_05200	COG0835	chemotaxis
AMBAS45_05220	COG0646	methionine synthase
AMBAS45_05220	COG1410	methionine synthase
AMBAS45_05225	COG0646	methionine synthase
AMBAS45_05225	COG1410	methionine synthase
AMBAS45_05235	COG3123	guanosine phosphorylase activity
AMBAS45_05245	COG0583	DNA-binding transcription factor activity
AMBAS45_05250	COG0583	DNA-binding transcription factor activity
AMBAS45_05255	COG0288	reversible hydration of carbon dioxide
AMBAS45_05260	COG0659	secondary active sulfate transmembrane transporter activity
AMBAS45_05270	COG1309	transcriptional regulator
AMBAS45_05275	COG3590	peptidase
AMBAS45_05285	COG2137	regulation of response to DNA damage stimulus
AMBAS45_05290	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMBAS45_05300	COG1607	acyl-coa hydrolase
AMBAS45_05310	COG0511	ligase activity, forming carbon-carbon bonds
AMBAS45_05310	COG5016	pyruvate
AMBAS45_05315	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
AMBAS45_05320	COG4172	Belongs to the ABC transporter superfamily
AMBAS45_05330	COG4171	peptide transport system, permease
AMBAS45_05335	COG4168	peptide transport system, permease
AMBAS45_05340	COG0747	negative chemotaxis
AMBAS45_05345	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AMBAS45_05350	COG1842	Phage shock protein A
AMBAS45_05380	COG0625	glutathione transferase activity
AMBAS45_05385	COG1522	sequence-specific DNA binding
AMBAS45_05390	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AMBAS45_05405	COG4206	TonB-dependent receptor
AMBAS45_05410	COG2226	methyltransferase
AMBAS45_05420	COG0811	peptide transport
AMBAS45_05425	COG0811	peptide transport
AMBAS45_05430	COG0848	biopolymer transport protein
AMBAS45_05445	COG1444	tRNA N-acetyltransferase activity
AMBAS45_05485	COG0456	acetyltransferase
AMBAS45_05500	COG0583	DNA-binding transcription factor activity
AMBAS45_05505	COG2814	Major facilitator Superfamily
AMBAS45_05510	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMBAS45_05515	COG0656	L-ascorbic acid biosynthetic process
AMBAS45_05530	COG1566	PFAM secretion protein HlyD family protein
AMBAS45_05535	COG1846	Transcriptional regulator
AMBAS45_05540	COG4771	TonB-dependent receptor
AMBAS45_05550	COG3275	phosphorelay sensor kinase activity
AMBAS45_05555	COG1966	Carbon starvation protein
AMBAS45_05585	COG2197	response regulator
AMBAS45_05600	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMBAS45_05610	COG3706	GGDEF domain
AMBAS45_05630	COG3706	GGDEF domain
AMBAS45_05650	COG1902	pentaerythritol trinitrate reductase activity
AMBAS45_05660	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMBAS45_05665	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AMBAS45_05675	COG3344	reverse transcriptase
AMBAS45_05680	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AMBAS45_05685	COG0564	pseudouridine synthase activity
AMBAS45_05695	COG0612	Peptidase, M16
AMBAS45_05700	COG2918	glutathione biosynthetic process
AMBAS45_05725	COG2840	Smr protein MutS2
AMBAS45_05730	COG2890	protein-(glutamine-N5) methyltransferase activity
AMBAS45_05745	COG2719	SpoVR family
AMBAS45_05750	COG2718	Belongs to the UPF0229 family
AMBAS45_05755	COG2766	serine protein kinase
AMBAS45_05765	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AMBAS45_05770	COG4771	TonB-dependent receptor
AMBAS45_05795	COG0450	alkyl hydroperoxide reductase
AMBAS45_05800	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AMBAS45_05805	COG2885	chlorophyll binding
AMBAS45_05810	COG0584	glycerophosphoryl diester phosphodiesterase
AMBAS45_05815	COG0346	lactoylglutathione lyase activity
AMBAS45_05820	COG4221	oxidoreductase activity
AMBAS45_05825	COG1278	Cold shock
AMBAS45_05845	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AMBAS45_05850	COG4660	Part of a membrane complex involved in electron transport
AMBAS45_05855	COG4659	FMN binding
AMBAS45_05860	COG4658	electron transport chain
AMBAS45_05865	COG4656	Part of a membrane complex involved in electron transport
AMBAS45_05870	COG2878	Part of a membrane complex involved in electron transport
AMBAS45_05880	COG0534	Mate efflux family protein
AMBAS45_05885	COG0556	nucleotide-excision repair
AMBAS45_05900	COG0602	queuosine metabolic process
AMBAS45_05910	COG0367	asparagine synthase
AMBAS45_05930	COG0471	metal ion transport
AMBAS45_05930	COG3273	potassium ion transport
AMBAS45_05945	COG0529	Catalyzes the synthesis of activated sulfate
AMBAS45_05950	COG0175	sulfate reduction
AMBAS45_05955	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMBAS45_05960	COG2199	diguanylate cyclase activity
AMBAS45_05960	COG2203	Gaf domain
AMBAS45_05985	COG2304	oxidoreductase activity
AMBAS45_06005	COG0714	Associated with various cellular activities
AMBAS45_06015	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMBAS45_06015	COG1024	Enoyl-CoA hydratase
AMBAS45_06035	COG1025	Belongs to the peptidase M16 family
AMBAS45_06040	COG2062	phosphohistidine phosphatase, SixA
AMBAS45_06050	COG4536	flavin adenine dinucleotide binding
AMBAS45_06055	COG4137	Cytochrome C assembly protein
AMBAS45_06060	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AMBAS45_06100	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMBAS45_06105	COG1132	(ABC) transporter
AMBAS45_06115	COG0228	four-way junction DNA binding
AMBAS45_06120	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMBAS45_06125	COG0336	Belongs to the RNA methyltransferase TrmD family
AMBAS45_06130	COG0335	large ribosomal subunit rRNA binding
AMBAS45_06140	COG2860	membrane
AMBAS45_06160	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AMBAS45_06165	COG1605	Chorismate mutase
AMBAS45_06165	COG0287	Prephenate dehydrogenase
AMBAS45_06195	COG0077	Prephenate dehydratase
AMBAS45_06195	COG1605	Chorismate mutase
AMBAS45_06200	COG0745	RESPONSE REGULATOR receiver
AMBAS45_06205	COG0023	Translation Initiation Factor
AMBAS45_06235	COG2205	protein histidine kinase activity
AMBAS45_06245	COG2204	response regulator
AMBAS45_06260	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AMBAS45_06265	COG0494	nUDIX hydrolase
AMBAS45_06270	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AMBAS45_06280	COG2255	four-way junction helicase activity
AMBAS45_06285	COG0824	Thioesterase
AMBAS45_06290	COG0811	peptide transport
AMBAS45_06305	COG0823	Involved in the tonB-independent uptake of proteins
AMBAS45_06310	COG2885	chlorophyll binding
AMBAS45_06315	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AMBAS45_06320	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AMBAS45_06325	COG0582	viral genome integration into host DNA
AMBAS45_06370	COG0616	signal peptide processing
AMBAS45_06375	COG0582	viral genome integration into host DNA
AMBAS45_06395	COG4667	esterase of the alpha-beta hydrolase superfamily
AMBAS45_06400	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AMBAS45_06410	COG0784	Response regulator, receiver
AMBAS45_06410	COG2205	protein histidine kinase activity
AMBAS45_06425	COG3038	cytochrome b561
AMBAS45_06445	COG1451	nucleotide metabolic process
AMBAS45_06455	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMBAS45_06465	COG1309	transcriptional regulator
AMBAS45_06470	COG4774	siderophore transport
AMBAS45_06490	COG3706	GGDEF domain
AMBAS45_06500	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AMBAS45_06500	COG3008	intermembrane lipid transfer
AMBAS45_06505	COG2995	paraquat-inducible protein a
AMBAS45_06515	COG0017	Asparaginyl-tRNA synthetase
AMBAS45_06530	COG0189	ligase activity
AMBAS45_06560	COG0156	8-amino-7-oxononanoate synthase activity
AMBAS45_06565	COG1073	alpha beta
AMBAS45_06565	COG2226	methyltransferase
AMBAS45_06575	COG3340	Belongs to the peptidase S51 family
AMBAS45_06580	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMBAS45_06585	COG4139	cobalamin transport
AMBAS45_06590	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
AMBAS45_06595	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
AMBAS45_06610	COG2205	protein histidine kinase activity
AMBAS45_06615	COG0745	RESPONSE REGULATOR receiver
AMBAS45_06620	COG0569	domain protein
AMBAS45_06625	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AMBAS45_06640	COG5265	(ABC) transporter
AMBAS45_06650	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMBAS45_06660	COG0745	RESPONSE REGULATOR receiver
AMBAS45_06670	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMBAS45_06690	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMBAS45_06705	COG2755	lipolytic protein G-D-S-L family
AMBAS45_06710	COG4181	ATPase activity
AMBAS45_06715	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AMBAS45_06720	COG1090	epimerase
AMBAS45_06725	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AMBAS45_06730	COG0628	permease
AMBAS45_06740	COG0745	RESPONSE REGULATOR receiver
AMBAS45_06755	COG2350	Protein conserved in bacteria
AMBAS45_06760	COG0159	tryptophan synthase activity
AMBAS45_06770	COG0134	indole-3-glycerol-phosphate synthase activity
AMBAS45_06770	COG0135	phosphoribosylanthranilate isomerase activity
AMBAS45_06775	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AMBAS45_06785	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AMBAS45_06790	COG0613	PHP domain protein
AMBAS45_06795	COG0009	L-threonylcarbamoyladenylate synthase
AMBAS45_06805	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AMBAS45_06815	COG0656	L-ascorbic acid biosynthetic process
AMBAS45_06820	COG0110	maltose O-acetyltransferase activity
AMBAS45_06835	COG2733	membrane
AMBAS45_06840	COG0500	methyltransferase
AMBAS45_06845	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMBAS45_06850	COG0497	DNA recombination
AMBAS45_06855	COG0783	Belongs to the Dps family
AMBAS45_06870	COG1454	alcohol dehydrogenase
AMBAS45_06875	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_06885	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AMBAS45_06890	COG2610	gluconate transmembrane transporter activity
AMBAS45_06895	COG4771	TonB-dependent receptor
AMBAS45_06920	COG0745	RESPONSE REGULATOR receiver
AMBAS45_06930	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AMBAS45_06965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMBAS45_06965	COG2198	Histidine kinase
AMBAS45_06965	COG0784	Response regulator, receiver
AMBAS45_06965	COG2205	protein histidine kinase activity
AMBAS45_06970	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMBAS45_06980	COG0484	heat shock protein binding
AMBAS45_06985	COG3909	cytochrome
AMBAS45_06995	COG2200	EAL domain
AMBAS45_06995	COG2202	Pas domain
AMBAS45_06995	COG2199	diguanylate cyclase activity
AMBAS45_07010	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AMBAS45_07020	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AMBAS45_07025	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMBAS45_07050	COG0071	Belongs to the small heat shock protein (HSP20) family
AMBAS45_07055	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMBAS45_07060	COG0280	phosphate acetyltransferase
AMBAS45_07060	COG0857	belongs to the CobB CobQ family
AMBAS45_07075	COG4535	Mg2 and Co2 transporter CorC
AMBAS45_07085	COG1702	phosphate starvation-inducible protein PhoH
AMBAS45_07095	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMBAS45_07135	COG1607	acyl-coa hydrolase
AMBAS45_07140	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AMBAS45_07150	COG1115	amino acid carrier protein
AMBAS45_07160	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMBAS45_07165	COG0012	GTP binding
AMBAS45_07185	COG1064	alcohol dehydrogenase
AMBAS45_07195	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMBAS45_07200	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AMBAS45_07205	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AMBAS45_07210	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AMBAS45_07220	COG2890	protein-(glutamine-N5) methyltransferase activity
AMBAS45_07225	COG0784	Response regulator, receiver
AMBAS45_07225	COG3437	response regulator, receiver
AMBAS45_07230	COG3094	Invasion gene expression up-regulator, SirB
AMBAS45_07245	COG0583	DNA-binding transcription factor activity
AMBAS45_07270	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
AMBAS45_07275	COG0515	serine threonine protein kinase
AMBAS45_07280	COG2116	formate transmembrane transporter activity
AMBAS45_07295	COG0714	Associated with various cellular activities
AMBAS45_07300	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
AMBAS45_07305	COG0033	Phosphoglucomutase
AMBAS45_07310	COG0058	SHG alpha-glucan phosphorylase activity
AMBAS45_07320	COG2988	succinylglutamate desuccinylase activity
AMBAS45_07335	COG1506	peptidase
AMBAS45_07340	COG1301	dicarboxylic acid transport
AMBAS45_07360	COG1393	Belongs to the ArsC family
AMBAS45_07385	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
AMBAS45_07500	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMBAS45_07515	COG1111	helicase
AMBAS45_07515	COG1205	dead DEAH box helicase
AMBAS45_07540	COG0714	Associated with various cellular activities
AMBAS45_07565	COG1196	nuclear chromosome segregation
AMBAS45_07595	COG5001	Diguanylate cyclase
AMBAS45_07595	COG3300	MHYT domain
AMBAS45_07610	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMBAS45_07625	COG2249	NAD(P)H dehydrogenase (quinone) activity
AMBAS45_07650	COG1733	regulation of RNA biosynthetic process
AMBAS45_07660	COG3447	MASE1 domain protein
AMBAS45_07660	COG5002	protein histidine kinase activity
AMBAS45_07660	COG5001	Diguanylate cyclase
AMBAS45_07670	COG0402	S-adenosylhomocysteine deaminase activity
AMBAS45_07675	COG2351	hydroxyisourate hydrolase activity
AMBAS45_07690	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMBAS45_07700	COG1309	transcriptional regulator
AMBAS45_07715	COG2252	PERMEase
AMBAS45_07720	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMBAS45_07735	COG3706	GGDEF domain
AMBAS45_07735	COG0745	RESPONSE REGULATOR receiver
AMBAS45_07740	COG2205	protein histidine kinase activity
AMBAS45_07740	COG0784	Response regulator, receiver
AMBAS45_07755	COG2233	PERMEase
AMBAS45_07775	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AMBAS45_07780	COG0730	response to heat
AMBAS45_07790	COG0154	amidase activity
AMBAS45_07835	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AMBAS45_07855	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AMBAS45_07865	COG1596	polysaccharide export
AMBAS45_07870	COG0489	protein tyrosine kinase activity
AMBAS45_07875	COG4464	protein tyrosine phosphatase activity
AMBAS45_07900	COG5002	protein histidine kinase activity
AMBAS45_07900	COG5001	Diguanylate cyclase
AMBAS45_07910	COG0438	transferase activity, transferring glycosyl groups
AMBAS45_07925	COG0463	Glycosyl transferase, family 2
AMBAS45_07925	COG1216	Glycosyl transferase, family 2
AMBAS45_07935	COG1216	Glycosyl transferase, family 2
AMBAS45_08000	COG1216	Glycosyl transferase, family 2
AMBAS45_08010	COG0438	transferase activity, transferring glycosyl groups
AMBAS45_08035	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AMBAS45_08035	COG2755	lipolytic protein G-D-S-L family
AMBAS45_08050	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMBAS45_08050	COG0072	phenylalanine-tRNA ligase activity
AMBAS45_08085	COG1472	Belongs to the glycosyl hydrolase 3 family
AMBAS45_08090	COG2096	Adenosyltransferase
AMBAS45_08100	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AMBAS45_08110	COG4591	ABC-type transport system involved in lipoprotein release permease component
AMBAS45_08135	COG0708	Exodeoxyribonuclease III
AMBAS45_08170	COG2814	Major facilitator Superfamily
AMBAS45_08210	COG1024	Enoyl-CoA hydratase
AMBAS45_08215	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AMBAS45_08220	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_08225	COG0789	Transcriptional regulator
AMBAS45_08230	COG0183	Belongs to the thiolase family
AMBAS45_08255	COG2925	Exonuclease
AMBAS45_08300	COG1643	Atp-dependent helicase
AMBAS45_08320	COG0604	alcohol dehydrogenase
AMBAS45_08320	COG3321	synthase
AMBAS45_08325	COG0328	RNA-DNA hybrid ribonuclease activity
AMBAS45_08330	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AMBAS45_08340	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AMBAS45_08345	COG1136	(ABC) transporter
AMBAS45_08350	COG4591	ABC-type transport system involved in lipoprotein release permease component
AMBAS45_08355	COG1301	dicarboxylic acid transport
AMBAS45_08365	COG3724	N-succinylarginine dihydrolase activity
AMBAS45_08370	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMBAS45_08375	COG3122	Protein conserved in bacteria
AMBAS45_08385	COG0583	DNA-binding transcription factor activity
AMBAS45_08390	COG0746	molybdenum cofactor guanylyltransferase activity
AMBAS45_08395	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AMBAS45_08400	COG0243	molybdopterin cofactor binding
AMBAS45_08410	COG0625	glutathione transferase activity
AMBAS45_08425	COG2153	protein acetylation
AMBAS45_08440	COG5002	protein histidine kinase activity
AMBAS45_08450	COG1530	ribonuclease E activity
AMBAS45_08455	COG0564	pseudouridine synthase activity
AMBAS45_08460	COG0546	phosphoglycolate phosphatase activity
AMBAS45_08465	COG0424	maF-like protein
AMBAS45_08470	COG1399	metal-binding, possibly nucleic acid-binding protein
AMBAS45_08480	COG0416	fatty acid biosynthetic process
AMBAS45_08485	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMBAS45_08490	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AMBAS45_08500	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMBAS45_08505	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMBAS45_08510	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AMBAS45_08515	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AMBAS45_08530	COG0084	hydrolase, TatD family'
AMBAS45_08535	COG0259	pyridoxamine-phosphate oxidase activity
AMBAS45_08540	COG0702	epimerase
AMBAS45_08545	COG3706	GGDEF domain
AMBAS45_08565	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_08570	COG0596	Alpha beta hydrolase
AMBAS45_08575	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMBAS45_08575	COG1024	Enoyl-CoA hydratase
AMBAS45_08580	COG0183	Belongs to the thiolase family
AMBAS45_08585	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_08590	COG0596	Alpha beta hydrolase
AMBAS45_08605	COG2390	Transcriptional regulator
AMBAS45_08610	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMBAS45_08620	COG0246	Mannitol dehydrogenase
AMBAS45_08635	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AMBAS45_08640	COG0523	cobalamin synthesis protein
AMBAS45_08645	COG0277	FAD linked oxidase domain protein
AMBAS45_08645	COG0247	lactate metabolic process
AMBAS45_08670	COG0668	transmembrane transport
AMBAS45_08675	COG4771	TonB-dependent receptor
AMBAS45_08695	COG3437	response regulator, receiver
AMBAS45_08705	COG0195	Participates in both transcription termination and antitermination
AMBAS45_08720	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMBAS45_08730	COG3300	MHYT domain
AMBAS45_08730	COG5001	Diguanylate cyclase
AMBAS45_08735	COG1187	pseudouridine synthase activity
AMBAS45_08745	COG3153	acetyltransferase
AMBAS45_08745	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AMBAS45_08780	COG0450	alkyl hydroperoxide reductase
AMBAS45_08825	COG1032	radical SAM domain protein
AMBAS45_08840	COG4771	TonB-dependent receptor
AMBAS45_08845	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMBAS45_08855	COG4134	Bacterial extracellular solute-binding protein
AMBAS45_08865	COG4136	ATPase activity
AMBAS45_08870	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMBAS45_08890	COG3706	GGDEF domain
AMBAS45_08890	COG2203	Gaf domain
AMBAS45_08890	COG4251	negative regulation of phosphorylation
AMBAS45_08890	COG5001	Diguanylate cyclase
AMBAS45_08915	COG0583	DNA-binding transcription factor activity
AMBAS45_08920	COG2249	NAD(P)H dehydrogenase (quinone) activity
AMBAS45_08940	COG0583	DNA-binding transcription factor activity
AMBAS45_08960	COG1131	(ABC) transporter
AMBAS45_08965	COG1902	pentaerythritol trinitrate reductase activity
AMBAS45_08975	COG2867	negative regulation of translational initiation
AMBAS45_08980	COG2914	Belongs to the UPF0125 (RnfH) family
AMBAS45_08990	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AMBAS45_08995	COG4771	TonB-dependent receptor
AMBAS45_09000	COG0457	Tetratricopeptide repeat
AMBAS45_09020	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMBAS45_09020	COG0574	Belongs to the PEP-utilizing enzyme family
AMBAS45_09055	COG2850	peptidyl-arginine hydroxylation
AMBAS45_09065	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AMBAS45_09070	COG2915	High frequency lysogenization protein hflD homolog
AMBAS45_09075	COG0482	sulfurtransferase activity
AMBAS45_09080	COG1187	pseudouridine synthase activity
AMBAS45_09090	COG1278	Cold shock
AMBAS45_09095	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AMBAS45_09100	COG0542	response to heat
AMBAS45_09105	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMBAS45_09110	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
AMBAS45_09115	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AMBAS45_09120	COG0492	ferredoxin-NADP+ reductase activity
AMBAS45_09125	COG3092	negative regulation of chromosome organization
AMBAS45_09130	COG3091	SprT-like family
AMBAS45_09135	COG0616	signal peptide processing
AMBAS45_09150	COG0778	Nitroreductase
AMBAS45_09160	COG0252	asparaginase activity
AMBAS45_09165	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AMBAS45_09170	COG0321	lipoyl(octanoyl) transferase activity
AMBAS45_09175	COG2921	Belongs to the UPF0250 family
AMBAS45_09180	COG1686	Belongs to the peptidase S11 family
AMBAS45_09185	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AMBAS45_09190	COG0772	Belongs to the SEDS family
AMBAS45_09195	COG0768	penicillin binding
AMBAS45_09200	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AMBAS45_09205	COG0799	negative regulation of ribosome biogenesis
AMBAS45_09215	COG1466	dna polymerase III delta subunit
AMBAS45_09220	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
AMBAS45_09225	COG0495	leucyl-tRNA aminoacylation
AMBAS45_09235	COG1067	ATP-dependent peptidase activity
AMBAS45_09255	COG1534	Rna-binding protein
AMBAS45_09260	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AMBAS45_09265	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMBAS45_09270	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AMBAS45_09275	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMBAS45_09280	COG0149	triose-phosphate isomerase activity
AMBAS45_09285	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AMBAS45_09310	COG1803	Methylglyoxal synthase
AMBAS45_09310	COG1597	lipid kinase activity
AMBAS45_09320	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_09325	COG0561	phosphatase activity
AMBAS45_09340	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMBAS45_09365	COG1185	polyribonucleotide nucleotidyltransferase activity
AMBAS45_09380	COG2801	Transposase and inactivated derivatives
AMBAS45_09520	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
AMBAS45_09525	COG1196	nuclear chromosome segregation
AMBAS45_09535	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMBAS45_09555	COG1132	(ABC) transporter
AMBAS45_09560	COG1663	tetraacyldisaccharide 4'-kinase activity
AMBAS45_09600	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AMBAS45_09605	COG0435	Glutathione S-transferase
AMBAS45_09610	COG1741	Belongs to the pirin family
AMBAS45_09635	COG0372	Belongs to the citrate synthase family
AMBAS45_09640	COG2009	succinate dehydrogenase
AMBAS45_09645	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AMBAS45_09650	COG1053	succinate dehydrogenase
AMBAS45_09655	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AMBAS45_09660	COG0567	Dehydrogenase, E1 component
AMBAS45_09665	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMBAS45_09700	COG4667	esterase of the alpha-beta hydrolase superfamily
AMBAS45_09720	COG0366	Alpha amylase catalytic
AMBAS45_09730	COG1874	Beta-galactosidase
AMBAS45_09730	COG0366	Alpha amylase catalytic
AMBAS45_09735	COG1609	Transcriptional regulator
AMBAS45_09745	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_09750	COG2267	carboxylic ester hydrolase activity
AMBAS45_09760	COG0616	signal peptide processing
AMBAS45_09775	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AMBAS45_09780	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMBAS45_09785	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMBAS45_09790	COG0386	Belongs to the glutathione peroxidase family
AMBAS45_09795	COG2084	Dehydrogenase
AMBAS45_09805	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_09810	COG1024	Enoyl-CoA hydratase
AMBAS45_09815	COG2226	methyltransferase
AMBAS45_09825	COG3083	sulfuric ester hydrolase activity
AMBAS45_09830	COG3082	Protein of unknown function (DUF1414)
AMBAS45_09835	COG3081	Nucleoid-associated protein
AMBAS45_09845	COG1196	nuclear chromosome segregation
AMBAS45_09845	COG0741	lytic transglycosylase activity
AMBAS45_09845	COG0739	heme binding
AMBAS45_09865	COG3275	phosphorelay sensor kinase activity
AMBAS45_09870	COG3279	Response regulator of the LytR AlgR family
AMBAS45_09875	COG0205	6-phosphofructokinase activity
AMBAS45_09885	COG2205	protein histidine kinase activity
AMBAS45_09885	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMBAS45_09915	COG0513	Belongs to the DEAD box helicase family
AMBAS45_09925	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AMBAS45_09930	COG0583	DNA-binding transcription factor activity
AMBAS45_09950	COG1760	l-serine dehydratase
AMBAS45_09970	COG1322	Protein conserved in bacteria
AMBAS45_09975	COG1404	Belongs to the peptidase S8 family
AMBAS45_09980	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AMBAS45_09985	COG0022	dehydrogenase e1 component
AMBAS45_09995	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AMBAS45_10000	COG0515	serine threonine protein kinase
AMBAS45_10005	COG1946	Acyl-CoA thioesterase
AMBAS45_10015	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AMBAS45_10025	COG1956	GAF domain-containing protein
AMBAS45_10040	COG0793	Belongs to the peptidase S41A family
AMBAS45_10045	COG0733	neurotransmitter:sodium symporter activity
AMBAS45_10055	COG0308	aminopeptidase N
AMBAS45_10085	COG2902	Dehydrogenase
AMBAS45_10090	COG0167	dihydroorotate dehydrogenase activity
AMBAS45_10115	COG3130	regulation of translation
AMBAS45_10120	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AMBAS45_10130	COG0415	Belongs to the DNA photolyase family
AMBAS45_10150	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AMBAS45_10175	COG2010	Cytochrome c
AMBAS45_10190	COG3278	Belongs to the heme-copper respiratory oxidase family
AMBAS45_10200	COG2193	ferroxidase activity
AMBAS45_10215	COG0069	glutamate synthase activity
AMBAS45_10225	COG0589	response to stress
AMBAS45_10230	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AMBAS45_10290	COG3046	protein related to deoxyribodipyrimidine photolyase
AMBAS45_10295	COG0415	Belongs to the DNA photolyase family
AMBAS45_10305	COG0589	response to stress
AMBAS45_10315	COG1752	Esterase of the alpha-beta hydrolase superfamily
AMBAS45_10335	COG1280	lysine exporter protein (LysE YggA)
AMBAS45_10340	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMBAS45_10345	COG2897	thiosulfate sulfurtransferase activity
AMBAS45_10350	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AMBAS45_10365	COG0322	excinuclease ABC activity
AMBAS45_10370	COG2197	response regulator
AMBAS45_10375	COG1741	Belongs to the pirin family
AMBAS45_10385	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AMBAS45_10390	COG3384	dioxygenase
AMBAS45_10395	COG2259	Doxx family
AMBAS45_10400	COG0583	DNA-binding transcription factor activity
AMBAS45_10410	COG0670	Belongs to the BI1 family
AMBAS45_10415	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AMBAS45_10420	COG2923	Belongs to the DsrF TusC family
AMBAS45_10430	COG2920	part of a sulfur-relay system
AMBAS45_10460	COG4206	TonB-dependent receptor
AMBAS45_10460	COG4206	TonB-dependent receptor
AMBAS45_10475	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AMBAS45_10480	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AMBAS45_10485	COG0531	amino acid
AMBAS45_10485	COG1674	ftsk spoiiie
AMBAS45_10495	COG0686	Belongs to the AlaDH PNT family
AMBAS45_10500	COG0284	orotidine-5'-phosphate decarboxylase activity
AMBAS45_10505	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AMBAS45_10520	COG0776	regulation of translation
AMBAS45_10525	COG0539	negative regulation of cytoplasmic translation
AMBAS45_10530	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AMBAS45_10535	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AMBAS45_10540	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AMBAS45_10550	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMBAS45_10555	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMBAS45_10560	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMBAS45_10565	COG0633	Ferredoxin
AMBAS45_10570	COG4221	oxidoreductase activity
AMBAS45_10595	COG0745	RESPONSE REGULATOR receiver
AMBAS45_10595	COG3706	GGDEF domain
AMBAS45_10610	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AMBAS45_10615	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMBAS45_10625	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AMBAS45_10635	COG4783	chaperone-mediated protein folding
AMBAS45_10640	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AMBAS45_10645	COG1393	Belongs to the ArsC family
AMBAS45_10680	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AMBAS45_10690	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_10715	COG0572	uridine kinase
AMBAS45_10720	COG3769	mannosylglycerate metabolic process
AMBAS45_10725	COG1215	transferase activity, transferring glycosyl groups
AMBAS45_10740	COG0303	'Molybdopterin
AMBAS45_10745	COG0534	Mate efflux family protein
AMBAS45_10760	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMBAS45_10765	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMBAS45_10895	COG3011	Protein conserved in bacteria
AMBAS45_10900	COG1280	lysine exporter protein (LysE YggA)
AMBAS45_10975	COG0405	Gamma-glutamyltransferase
AMBAS45_10980	COG1024	Enoyl-CoA hydratase
AMBAS45_11040	COG1671	Belongs to the UPF0178 family
AMBAS45_11045	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_11050	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_11055	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_11060	COG2207	Transcriptional regulator
AMBAS45_11060	COG0662	Cupin 2, conserved barrel domain protein
AMBAS45_11080	COG1505	serine-type exopeptidase activity
AMBAS45_11120	COG0596	Alpha beta hydrolase
AMBAS45_11130	COG0716	FMN binding
AMBAS45_11155	COG4772	TonB-dependent receptor
AMBAS45_11165	COG0735	belongs to the Fur family
AMBAS45_11175	COG1984	allophanate hydrolase subunit 2
AMBAS45_11180	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AMBAS45_11185	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AMBAS45_11190	COG2996	Protein conserved in bacteria
AMBAS45_11195	COG1765	OsmC-like protein
AMBAS45_11200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMBAS45_11225	COG0436	Aminotransferase
AMBAS45_11230	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AMBAS45_11235	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AMBAS45_11265	COG3012	SEC-C Motif Domain Protein
AMBAS45_11270	COG0366	Alpha amylase catalytic
AMBAS45_11275	COG0604	alcohol dehydrogenase
AMBAS45_11285	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_11295	COG4771	TonB-dependent receptor
AMBAS45_11315	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AMBAS45_11320	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AMBAS45_11335	COG0314	molybdopterin synthase activity
AMBAS45_11340	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AMBAS45_11345	COG0315	cyclic pyranopterin monophosphate synthase activity
AMBAS45_11350	COG0521	Mo-molybdopterin cofactor biosynthetic process
AMBAS45_11400	COG0789	Transcriptional regulator
AMBAS45_11480	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AMBAS45_11490	COG3268	Saccharopine dehydrogenase
AMBAS45_11495	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMBAS45_11510	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AMBAS45_11515	COG4771	TonB-dependent receptor
AMBAS45_11555	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMBAS45_11565	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AMBAS45_11570	COG1074	ATP-dependent DNA helicase activity
AMBAS45_11575	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AMBAS45_11585	COG1022	Amp-dependent synthetase and ligase
AMBAS45_11615	COG0583	DNA-binding transcription factor activity
AMBAS45_11635	COG0640	Transcriptional regulator
AMBAS45_11655	COG2204	response regulator
AMBAS45_11665	COG4251	negative regulation of phosphorylation
AMBAS45_11670	COG0784	Response regulator, receiver
AMBAS45_11675	COG2205	protein histidine kinase activity
AMBAS45_11675	COG0784	Response regulator, receiver
AMBAS45_11730	COG3139	Protein of unknown function (DUF1315)
AMBAS45_11740	COG1115	amino acid carrier protein
AMBAS45_11745	COG2866	Carboxypeptidase
AMBAS45_11765	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMBAS45_11775	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMBAS45_11780	COG1640	4-alpha-glucanotransferase
AMBAS45_11790	COG0676	glucose-6-phosphate 1-epimerase activity
AMBAS45_11795	COG0800	Aldolase
AMBAS45_11805	COG0129	dihydroxy-acid dehydratase activity
AMBAS45_11815	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMBAS45_11820	COG1737	Transcriptional regulator
AMBAS45_11825	COG0469	pyruvate kinase activity
AMBAS45_11830	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMBAS45_11850	COG2823	Periplasmic or secreted lipoprotein
AMBAS45_11885	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_11890	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
AMBAS45_11900	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AMBAS45_11915	COG2721	sulfolactate sulfo-lyase activity
AMBAS45_11920	COG1904	glucuronate isomerase
AMBAS45_11925	COG0246	Mannitol dehydrogenase
AMBAS45_11930	COG0800	Aldolase
AMBAS45_11935	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMBAS45_11940	COG2755	lipolytic protein G-D-S-L family
AMBAS45_11950	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AMBAS45_11960	COG4677	pectinesterase activity
AMBAS45_11980	COG2356	endonuclease I
AMBAS45_12005	COG0583	DNA-binding transcription factor activity
AMBAS45_12015	COG1979	alcohol dehydrogenase
AMBAS45_12020	COG1902	pentaerythritol trinitrate reductase activity
AMBAS45_12025	COG2203	Gaf domain
AMBAS45_12025	COG3706	GGDEF domain
AMBAS45_12025	COG4251	negative regulation of phosphorylation
AMBAS45_12025	COG5001	Diguanylate cyclase
AMBAS45_12035	COG0753	catalase activity
AMBAS45_12040	COG3437	response regulator, receiver
AMBAS45_12040	COG0784	Response regulator, receiver
AMBAS45_12045	COG4191	Histidine kinase
AMBAS45_12045	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMBAS45_12080	COG0471	metal ion transport
AMBAS45_12095	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMBAS45_12095	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMBAS45_12100	COG0668	transmembrane transport
AMBAS45_12105	COG2226	methyltransferase
AMBAS45_12110	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMBAS45_12115	COG0741	lytic transglycosylase activity
AMBAS45_12115	COG1388	LysM domain
AMBAS45_12125	COG0215	cysteine-tRNA ligase activity
AMBAS45_12130	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMBAS45_12135	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AMBAS45_12145	COG2268	Band 7 protein
AMBAS45_12165	COG1733	regulation of RNA biosynthetic process
AMBAS45_12170	COG0604	alcohol dehydrogenase
AMBAS45_12175	COG1063	alcohol dehydrogenase
AMBAS45_12180	COG0583	DNA-binding transcription factor activity
AMBAS45_12215	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AMBAS45_12220	COG1286	toxin biosynthetic process
AMBAS45_12225	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AMBAS45_12230	COG0285	dihydrofolate synthase activity
AMBAS45_12255	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMBAS45_12275	COG3609	addiction module antidote protein, CC2985 family
AMBAS45_12280	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMBAS45_12285	COG0318	PFAM AMP-dependent synthetase and ligase
AMBAS45_12295	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMBAS45_12295	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AMBAS45_12340	COG0789	Transcriptional regulator
AMBAS45_12350	COG1119	ATPase activity
AMBAS45_12360	COG0523	cobalamin synthesis protein
AMBAS45_12370	COG2031	fatty acid transporter
AMBAS45_12375	COG0784	Response regulator, receiver
AMBAS45_12375	COG2205	protein histidine kinase activity
AMBAS45_12375	COG5002	protein histidine kinase activity
AMBAS45_12380	COG0612	Peptidase, M16
AMBAS45_12395	COG3101	peptidyl-lysine hydroxylation
AMBAS45_12425	COG1902	pentaerythritol trinitrate reductase activity
AMBAS45_12425	COG0446	pyridine nucleotide-disulphide oxidoreductase
AMBAS45_12450	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AMBAS45_12460	COG4399	Belongs to the UPF0754 family
AMBAS45_12490	COG2186	Transcriptional regulator
AMBAS45_12500	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AMBAS45_12505	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMBAS45_12510	COG2983	Belongs to the UPF0260 family
AMBAS45_12515	COG0179	Fumarylacetoacetate (FAA) hydrolase
AMBAS45_12530	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AMBAS45_12535	COG0318	PFAM AMP-dependent synthetase and ligase
AMBAS45_12540	COG2267	carboxylic ester hydrolase activity
AMBAS45_12555	COG1214	PFAM Peptidase M22, glycoprotease
AMBAS45_12560	COG1199	ATP-dependent helicase activity
AMBAS45_12640	COG4771	TonB-dependent receptor
AMBAS45_12655	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AMBAS45_12660	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AMBAS45_12665	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMBAS45_12670	COG0131	Imidazoleglycerol-phosphate dehydratase
AMBAS45_12670	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AMBAS45_12675	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AMBAS45_12690	COG0140	phosphoribosyl-ATP diphosphatase activity
AMBAS45_12690	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AMBAS45_12700	COG2116	formate transmembrane transporter activity
AMBAS45_12705	COG0840	transmembrane signaling receptor activity
AMBAS45_12710	COG0612	Peptidase, M16
AMBAS45_12715	COG0681	Belongs to the peptidase S26 family
AMBAS45_12740	COG0326	Molecular chaperone. Has ATPase activity
AMBAS45_12745	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AMBAS45_12770	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMBAS45_12775	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMBAS45_12785	COG3220	belongs to the UPF0276 family
AMBAS45_12805	COG1183	phosphatidylcholine synthase activity
AMBAS45_12825	COG0277	FAD linked oxidase domain protein
AMBAS45_12830	COG1620	l-lactate permease
AMBAS45_12850	COG0542	response to heat
AMBAS45_12860	COG0564	pseudouridine synthase activity
AMBAS45_12875	COG1595	DNA-templated transcription, initiation
AMBAS45_12890	COG4221	oxidoreductase activity
AMBAS45_12905	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AMBAS45_12915	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AMBAS45_12925	COG0142	geranyltranstransferase activity
AMBAS45_12935	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AMBAS45_12940	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AMBAS45_12950	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AMBAS45_12965	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMBAS45_12965	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMBAS45_12985	COG0488	(ABC) transporter
AMBAS45_12995	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AMBAS45_13005	COG0560	Phosphoserine phosphatase
AMBAS45_13015	COG0084	hydrolase, TatD family'
AMBAS45_13030	COG0571	ribonuclease III activity
AMBAS45_13035	COG0681	Belongs to the peptidase S26 family
AMBAS45_13060	COG1595	DNA-templated transcription, initiation
AMBAS45_13065	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AMBAS45_13080	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AMBAS45_13160	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AMBAS45_13165	COG1047	Peptidyl-prolyl cis-trans
AMBAS45_13175	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AMBAS45_13180	COG0196	riboflavin kinase activity
AMBAS45_13185	COG0728	peptidoglycan biosynthetic process
AMBAS45_13190	COG0268	Binds directly to 16S ribosomal RNA
AMBAS45_13205	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_13210	COG0385	Bile acid
AMBAS45_13240	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMBAS45_13245	COG0776	regulation of translation
AMBAS45_13250	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AMBAS45_13255	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMBAS45_13260	COG0740	serine-type endopeptidase activity
AMBAS45_13265	COG0544	peptidyl-prolyl cis-trans isomerase activity
AMBAS45_13280	COG1720	tRNA m6t6A37 methyltransferase activity
AMBAS45_13290	COG1234	tRNA 3'-trailer cleavage
AMBAS45_13300	COG0123	including yeast histone deacetylase and acetoin utilization protein
AMBAS45_13320	COG0517	IMP dehydrogenase activity
AMBAS45_13320	COG0516	GMP reductase activity
AMBAS45_13325	COG1570	exodeoxyribonuclease VII activity
AMBAS45_13350	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMBAS45_13355	COG2976	Protein conserved in bacteria
AMBAS45_13375	COG3063	Type IV pilus biogenesis stability protein PilW
AMBAS45_13380	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AMBAS45_13390	COG2166	iron-sulfur cluster assembly
AMBAS45_13405	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMBAS45_13410	COG0719	Fe-S assembly protein
AMBAS45_13415	COG0396	ATPase activity
AMBAS45_13420	COG0719	Fe-S assembly protein
AMBAS45_13425	COG1104	cysteine desulfurase activity
AMBAS45_13430	COG1959	2 iron, 2 sulfur cluster binding
AMBAS45_13440	COG2072	flavoprotein involved in K transport
AMBAS45_13445	COG1045	serine acetyltransferase
AMBAS45_13450	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AMBAS45_13455	COG0483	inositol monophosphate 1-phosphatase activity
AMBAS45_13465	COG3279	Response regulator of the LytR AlgR family
AMBAS45_13470	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AMBAS45_13475	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AMBAS45_13480	COG1862	Preprotein translocase
AMBAS45_13485	COG0343	queuine tRNA-ribosyltransferase activity
AMBAS45_13505	COG1842	Phage shock protein A
AMBAS45_13510	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AMBAS45_13530	COG0754	glutathionylspermidine amidase activity
AMBAS45_13560	COG2066	Belongs to the glutaminase family
AMBAS45_13565	COG1785	Belongs to the alkaline phosphatase family
AMBAS45_13635	COG2171	N-acyltransferase activity
AMBAS45_13650	COG1216	Glycosyl transferase, family 2
AMBAS45_13670	COG0367	asparagine synthase
AMBAS45_13685	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AMBAS45_13690	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AMBAS45_13695	COG2755	lipolytic protein G-D-S-L family
AMBAS45_13695	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AMBAS45_13780	COG0489	protein tyrosine kinase activity
AMBAS45_13790	COG3267	Type II secretory pathway component ExeA
AMBAS45_13790	COG3409	Peptidoglycan-binding domain 1 protein
AMBAS45_13795	COG2827	Endonuclease containing a URI domain
AMBAS45_13815	COG1560	Kdo2-lipid A biosynthetic process
AMBAS45_13830	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_13850	COG1435	thymidine kinase activity
AMBAS45_13870	COG1609	Transcriptional regulator
AMBAS45_13875	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AMBAS45_13900	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMBAS45_13940	COG1012	belongs to the aldehyde dehydrogenase family
AMBAS45_13960	COG2203	Gaf domain
AMBAS45_13960	COG2199	diguanylate cyclase activity
AMBAS45_13965	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
AMBAS45_13970	COG0789	Transcriptional regulator
AMBAS45_14000	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_14065	COG2080	2 iron, 2 sulfur cluster binding
AMBAS45_14070	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AMBAS45_14075	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMBAS45_14120	COG0601	transmembrane transport
AMBAS45_14130	COG4172	Belongs to the ABC transporter superfamily
AMBAS45_14135	COG1028	Short-chain dehydrogenase reductase Sdr
AMBAS45_14145	COG0693	protein deglycase activity
AMBAS45_14150	COG1295	ribonuclease BN
AMBAS45_14155	COG0477	Major facilitator Superfamily
AMBAS45_14195	COG4681	YaeQ
AMBAS45_14230	COG0339	signal peptide processing
AMBAS45_14240	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AMBAS45_14270	COG0514	ATP-dependent DNA helicase (RecQ)
AMBAS45_14295	COG3706	GGDEF domain
AMBAS45_14310	COG4251	negative regulation of phosphorylation
AMBAS45_14315	COG2133	pyrroloquinoline quinone binding
AMBAS45_14375	COG0738	Major facilitator superfamily
AMBAS45_14380	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMBAS45_14390	COG2971	BadF BadG BcrA BcrD
AMBAS45_14415	COG0583	DNA-binding transcription factor activity
AMBAS45_14440	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMBAS45_14445	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMBAS45_14450	COG0006	proline dipeptidase activity
AMBAS45_14465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMBAS45_14475	COG2205	protein histidine kinase activity
AMBAS45_14480	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AMBAS45_14485	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AMBAS45_14490	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMBAS45_14510	COG3313	Fe-S protein
AMBAS45_14535	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMBAS45_14540	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMBAS45_14545	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AMBAS45_14550	COG2186	Transcriptional regulator
AMBAS45_14565	COG3577	Aspartyl protease
AMBAS45_14570	COG0157	Belongs to the NadC ModD family
AMBAS45_14575	COG4969	Belongs to the N-Me-Phe pilin family
AMBAS45_14580	COG1459	type II secretion system
AMBAS45_14585	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AMBAS45_14590	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AMBAS45_14590	COG0237	dephospho-CoA kinase activity
AMBAS45_14595	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
AMBAS45_14605	COG3608	succinylglutamate desuccinylase aspartoacylase
AMBAS45_14610	COG0840	transmembrane signaling receptor activity
AMBAS45_14615	COG4566	intracellular signal transduction
AMBAS45_14620	COG1192	Involved in chromosome partitioning
AMBAS45_14630	COG0643	Histidine kinase
AMBAS45_14630	COG2198	Histidine kinase
AMBAS45_14635	COG0745	RESPONSE REGULATOR receiver
AMBAS45_14640	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AMBAS45_14650	COG2201	protein-glutamate methylesterase activity
AMBAS45_14655	COG0835	chemotaxis
AMBAS45_14660	COG0840	transmembrane signaling receptor activity
AMBAS45_14665	COG0494	nUDIX hydrolase
AMBAS45_14675	COG0739	heme binding
AMBAS45_14680	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
AMBAS45_14685	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMBAS45_14690	COG0849	cell division
AMBAS45_14695	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AMBAS45_14700	COG1181	Belongs to the D-alanine--D-alanine ligase family
AMBAS45_14715	COG0772	Belongs to the SEDS family
AMBAS45_14720	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMBAS45_14730	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AMBAS45_14735	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMBAS45_14740	COG0768	penicillin binding
AMBAS45_14745	COG3116	cell division
AMBAS45_14755	COG2001	Belongs to the MraZ family
AMBAS45_14775	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMBAS45_14780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMBAS45_14800	COG0678	peroxiredoxin activity
AMBAS45_14800	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AMBAS45_14815	COG3706	GGDEF domain
AMBAS45_14825	COG2204	response regulator
AMBAS45_14850	COG0668	transmembrane transport
AMBAS45_14855	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AMBAS45_14860	COG0189	ligase activity
AMBAS45_14865	COG1678	Uncharacterized ACR, COG1678
AMBAS45_14870	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMBAS45_14895	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AMBAS45_14900	COG0762	integral membrane protein
AMBAS45_14910	COG1902	pentaerythritol trinitrate reductase activity
AMBAS45_14910	COG0446	pyridine nucleotide-disulphide oxidoreductase
AMBAS45_14940	COG1764	response to oxidative stress
AMBAS45_14945	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMBAS45_14955	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AMBAS45_14965	COG2814	Major facilitator Superfamily
AMBAS45_14980	COG1960	acyl-CoA dehydrogenase activity
AMBAS45_14990	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AMBAS45_15015	COG0318	PFAM AMP-dependent synthetase and ligase
AMBAS45_15045	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AMBAS45_15050	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AMBAS45_15070	COG0583	DNA-binding transcription factor activity
AMBAS45_15085	COG2197	response regulator
AMBAS45_15090	COG4585	Histidine kinase
AMBAS45_15105	COG0640	Transcriptional regulator
AMBAS45_15115	COG0431	NADPH-dependent FMN reductase
AMBAS45_15120	COG0798	PFAM Bile acid sodium symporter
AMBAS45_15125	COG2201	protein-glutamate methylesterase activity
AMBAS45_15130	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
AMBAS45_15140	COG0642	Histidine kinase
AMBAS45_15160	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AMBAS45_15195	COG1748	Saccharopine dehydrogenase
AMBAS45_15215	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AMBAS45_15220	COG3107	peptidoglycan biosynthetic process
AMBAS45_15240	COG2823	Periplasmic or secreted lipoprotein
AMBAS45_15260	COG4585	Histidine kinase
AMBAS45_15265	COG2197	response regulator
AMBAS45_15280	COG4771	TonB-dependent receptor
AMBAS45_15290	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AMBAS45_15295	COG0372	Belongs to the citrate synthase family
AMBAS45_15300	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AMBAS45_15305	COG2828	Protein conserved in bacteria
AMBAS45_15310	COG2203	Gaf domain
AMBAS45_15310	COG2199	diguanylate cyclase activity
AMBAS45_15330	COG5002	protein histidine kinase activity
AMBAS45_15330	COG2198	Histidine kinase
AMBAS45_15330	COG0784	Response regulator, receiver
AMBAS45_15340	COG0067	glutamate synthase
AMBAS45_15340	COG0069	glutamate synthase activity
AMBAS45_15340	COG0070	glutamate synthase
AMBAS45_15345	COG0493	'glutamate synthase
AMBAS45_15360	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMBAS45_15365	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
AMBAS45_15370	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AMBAS45_15390	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMBAS45_15395	COG5507	3-demethylubiquinone-9 3-methyltransferase
AMBAS45_15420	COG1196	nuclear chromosome segregation
AMBAS45_15420	COG0741	lytic transglycosylase activity
AMBAS45_15420	COG0739	heme binding
AMBAS45_15425	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AMBAS45_15435	COG0738	Major facilitator superfamily
AMBAS45_15445	COG1902	pentaerythritol trinitrate reductase activity
AMBAS45_15460	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMBAS45_15465	COG0625	glutathione transferase activity
AMBAS45_15475	COG2326	polyphosphate kinase activity
AMBAS45_15485	COG2894	cell division
AMBAS45_15490	COG0850	regulation of cytokinetic process
AMBAS45_15545	COG1914	H( )-stimulated, divalent metal cation uptake system
AMBAS45_15565	COG0174	glutamine synthetase
AMBAS45_15575	COG3852	Histidine kinase
AMBAS45_15580	COG2204	response regulator
AMBAS45_15585	COG3655	Transcriptional regulator
AMBAS45_15600	COG3437	response regulator, receiver
AMBAS45_15605	COG0204	Acyl-transferase
AMBAS45_15640	COG0525	valine-tRNA ligase activity
AMBAS45_15645	COG2927	DNA polymerase III (CHI subunit)
AMBAS45_15650	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AMBAS45_15655	COG0795	lipopolysaccharide-transporting ATPase activity
AMBAS45_15660	COG0795	lipopolysaccharide-transporting ATPase activity
AMBAS45_15740	COG0673	inositol 2-dehydrogenase activity
AMBAS45_15745	COG2205	protein histidine kinase activity
AMBAS45_15745	COG2198	Histidine kinase
AMBAS45_15745	COG0784	Response regulator, receiver
AMBAS45_15745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMBAS45_15750	COG0628	permease
AMBAS45_15770	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AMBAS45_15775	COG0697	spore germination
AMBAS45_15800	COG4771	TonB-dependent receptor
AMBAS45_15810	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMBAS45_15840	COG1609	Transcriptional regulator
AMBAS45_15885	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AMBAS45_15890	COG3706	GGDEF domain
AMBAS45_15895	COG0679	Auxin Efflux Carrier
AMBAS45_15925	COG1131	(ABC) transporter
AMBAS45_15935	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AMBAS45_15945	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
AMBAS45_15985	COG2205	protein histidine kinase activity
AMBAS45_15995	COG3901	Regulator of nitric oxide reductase transcription
AMBAS45_15995	COG0348	domain, Protein
AMBAS45_16005	COG2197	response regulator
AMBAS45_16035	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AMBAS45_16050	COG4771	TonB-dependent receptor
AMBAS45_16060	COG0583	DNA-binding transcription factor activity
AMBAS45_16065	COG1304	FMN binding
AMBAS45_16070	COG0277	FAD linked oxidase domain protein
AMBAS45_16080	COG1462	curli production assembly transport component CsgG
AMBAS45_16110	COG2197	response regulator
AMBAS45_16125	COG0513	Belongs to the DEAD box helicase family
AMBAS45_16130	COG5001	Diguanylate cyclase
AMBAS45_16145	COG3264	Mechanosensitive ion channel
AMBAS45_16145	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AMBAS45_16170	COG2199	diguanylate cyclase activity
AMBAS45_16170	COG2200	EAL domain
AMBAS45_16170	COG2202	Pas domain
AMBAS45_16195	COG0730	response to heat
AMBAS45_16215	COG4191	Histidine kinase
AMBAS45_16225	COG0417	DNA replication proofreading
AMBAS45_16235	COG0318	PFAM AMP-dependent synthetase and ligase
AMBAS45_16265	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMBAS45_16275	COG1573	uracil-dna glycosylase
AMBAS45_16280	COG5001	Diguanylate cyclase
AMBAS45_16280	COG3300	MHYT domain
AMBAS45_16300	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AMBAS45_16320	COG1983	PspC domain protein
AMBAS45_16325	COG1842	Phage shock protein A
AMBAS45_16335	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMBAS45_16340	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AMBAS45_16455	COG2885	chlorophyll binding
AMBAS45_16455	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AMBAS45_16470	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
AMBAS45_16475	COG0204	Acyl-transferase
AMBAS45_16480	COG0204	Acyl-transferase
AMBAS45_16485	COG0668	transmembrane transport
AMBAS45_16500	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMBAS45_16505	COG0733	neurotransmitter:sodium symporter activity
AMBAS45_16520	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMBAS45_16535	COG0716	FMN binding
AMBAS45_16545	COG0848	biopolymer transport protein
AMBAS45_16555	COG0457	Tetratricopeptide repeat
AMBAS45_16560	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AMBAS45_16590	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AMBAS45_16595	COG0702	epimerase
AMBAS45_16610	COG5001	Diguanylate cyclase
AMBAS45_16610	COG5002	protein histidine kinase activity
AMBAS45_16620	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AMBAS45_16630	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMBAS45_16640	COG0583	DNA-binding transcription factor activity
AMBAS45_16645	COG0121	glutamine amidotransferase
AMBAS45_16660	COG4682	membrane
AMBAS45_16690	COG4628	conserved protein (DUF2132)
AMBAS45_16700	COG3265	gluconokinase activity
AMBAS45_16705	COG1609	Transcriptional regulator
AMBAS45_16710	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMBAS45_16720	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMBAS45_16730	COG1477	protein flavinylation
AMBAS45_16735	COG2871	sodium ion transport
AMBAS45_16740	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AMBAS45_16745	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AMBAS45_16750	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AMBAS45_16755	COG1805	sodium ion transport
AMBAS45_16760	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AMBAS45_16765	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AMBAS45_16770	COG0545	Peptidyl-prolyl cis-trans isomerase
AMBAS45_16775	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AMBAS45_16780	COG0039	L-malate dehydrogenase activity
AMBAS45_16785	COG1438	arginine binding
AMBAS45_16810	COG0572	uridine kinase
AMBAS45_16815	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AMBAS45_16830	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
AMBAS45_16840	COG3706	GGDEF domain
AMBAS45_16840	COG0745	RESPONSE REGULATOR receiver
AMBAS45_16855	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMBAS45_16875	COG0189	ligase activity
AMBAS45_16885	COG0189	ligase activity
AMBAS45_16885	COG4067	protein conserved in archaea
AMBAS45_16910	COG1283	sodium-dependent phosphate transmembrane transporter activity
AMBAS45_16915	COG0667	Aldo Keto reductase
AMBAS45_16990	COG5001	Diguanylate cyclase
AMBAS45_17005	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
AMBAS45_17015	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AMBAS45_17020	COG0840	transmembrane signaling receptor activity
AMBAS45_17040	COG2274	protein secretion by the type I secretion system
AMBAS45_17045	COG0583	DNA-binding transcription factor activity
AMBAS45_17065	COG1216	Glycosyl transferase, family 2
AMBAS45_17065	COG0438	transferase activity, transferring glycosyl groups
AMBAS45_17075	COG1091	dTDP-4-dehydrorhamnose reductase activity
AMBAS45_17100	COG0463	Glycosyl transferase, family 2
AMBAS45_17105	COG1215	transferase activity, transferring glycosyl groups
AMBAS45_17115	COG1215	transferase activity, transferring glycosyl groups
AMBAS45_17130	COG1216	Glycosyl transferase, family 2
AMBAS45_17145	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AMBAS45_17150	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
AMBAS45_17150	COG0662	Cupin 2, conserved barrel domain protein
AMBAS45_17170	COG2161	toxin-antitoxin pair type II binding
AMBAS45_17180	COG0202	RNA polymerase activity
AMBAS45_17205	COG0201	protein transport
AMBAS45_17225	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMBAS45_17260	COG0784	Response regulator, receiver
AMBAS45_17260	COG5002	protein histidine kinase activity
AMBAS45_17295	COG0557	exoribonuclease II activity
AMBAS45_17315	COG4771	TonB-dependent receptor
AMBAS45_17330	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AMBAS45_17355	COG2234	aminopeptidase activity
AMBAS45_17365	COG4251	negative regulation of phosphorylation
AMBAS45_17375	COG1271	oxidase subunit
AMBAS45_17380	COG1294	oxidase, subunit
AMBAS45_17400	COG1522	sequence-specific DNA binding
AMBAS45_17410	COG1278	Cold shock
AMBAS45_17415	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AMBAS45_17425	COG2226	methyltransferase
AMBAS45_17435	COG0339	signal peptide processing
AMBAS45_17440	COG2201	protein-glutamate methylesterase activity
AMBAS45_17460	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMBAS45_17465	COG0243	molybdopterin cofactor binding
AMBAS45_17480	COG1506	peptidase
AMBAS45_17480	COG0823	Involved in the tonB-independent uptake of proteins
AMBAS45_17480	COG4946	Tricorn protease homolog
AMBAS45_17530	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMBAS45_17540	COG2197	response regulator
AMBAS45_17570	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AMBAS45_17575	COG1278	Cold shock
AMBAS45_17585	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AMBAS45_17590	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AMBAS45_17610	COG0281	malic enzyme
AMBAS45_17620	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AMBAS45_17650	COG0456	acetyltransferase
AMBAS45_17660	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AMBAS45_17665	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AMBAS45_17670	COG2177	Part of the ABC transporter FtsEX involved in
AMBAS45_17675	COG2884	Cell division ATP-binding protein ftsE
AMBAS45_17680	COG0552	protein localization to endoplasmic reticulum
AMBAS45_17685	COG0742	ribosomal rna small subunit methyltransferase
AMBAS45_17695	COG2095	MarC family integral membrane protein
AMBAS45_17715	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AMBAS45_17720	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMBAS45_17725	COG0617	tRNA 3'-terminal CCA addition
AMBAS45_17730	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AMBAS45_17745	COG0076	glutamate decarboxylase activity
AMBAS45_17760	COG0842	Transport permease protein
AMBAS45_17765	COG1131	(ABC) transporter
AMBAS45_17770	COG0745	RESPONSE REGULATOR receiver
AMBAS45_17775	COG2205	protein histidine kinase activity
AMBAS45_17795	COG1253	flavin adenine dinucleotide binding
AMBAS45_17800	COG0701	Predicted permease
AMBAS45_17805	COG1966	Carbon starvation protein
AMBAS45_17855	COG0848	biopolymer transport protein
AMBAS45_17865	COG0811	peptide transport
AMBAS45_17885	COG3128	pkhd-type hydroxylase
AMBAS45_17915	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMBAS45_17920	COG0049	tRNA binding
AMBAS45_17925	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMBAS45_17930	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMBAS45_17935	COG0085	RNA polymerase activity
AMBAS45_17945	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AMBAS45_17950	COG0081	regulation of translation
AMBAS45_17955	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMBAS45_17960	COG0250	Participates in transcription elongation, termination and antitermination
AMBAS45_17965	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AMBAS45_17970	COG1132	(ABC) transporter
AMBAS45_17975	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AMBAS45_17980	COG3590	peptidase
AMBAS45_17995	COG0513	Belongs to the DEAD box helicase family
AMBAS45_18005	COG0418	dihydroorotase activity
AMBAS45_18010	COG3040	lipid binding
AMBAS45_18015	COG4989	oxidoreductase activity
AMBAS45_18020	COG0346	lactoylglutathione lyase activity
AMBAS45_18025	COG0668	transmembrane transport
AMBAS45_18045	COG3344	reverse transcriptase
AMBAS45_18055	COG0302	gtp cyclohydrolase
AMBAS45_18065	COG2957	Belongs to the agmatine deiminase family
AMBAS45_18070	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AMBAS45_18080	COG1201	RNA secondary structure unwinding
AMBAS45_18085	COG2311	Membrane
AMBAS45_18105	COG1793	dna ligase
AMBAS45_18110	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMBAS45_18115	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMBAS45_18145	COG0625	glutathione transferase activity
AMBAS45_18150	COG0625	glutathione transferase activity
AMBAS45_18160	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AMBAS45_18175	COG1012	belongs to the aldehyde dehydrogenase family
AMBAS45_18180	COG0028	Belongs to the TPP enzyme family
AMBAS45_18195	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AMBAS45_18200	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AMBAS45_18205	COG0330	HflC and HflK could
AMBAS45_18210	COG0330	HflC and HflK could
AMBAS45_18215	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMBAS45_18220	COG1923	regulation of RNA biosynthetic process
AMBAS45_18225	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMBAS45_18240	COG0802	atpase or kinase
AMBAS45_18245	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AMBAS45_18245	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AMBAS45_18250	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AMBAS45_18260	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AMBAS45_18270	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AMBAS45_18275	COG0735	belongs to the Fur family
AMBAS45_18285	COG0432	Pfam Uncharacterised protein family UPF0047
AMBAS45_18295	COG0305	Participates in initiation and elongation during chromosome replication
AMBAS45_18305	COG3344	reverse transcriptase
AMBAS45_18330	COG2258	MOSC domain
AMBAS45_18400	COG0840	transmembrane signaling receptor activity
AMBAS45_18405	COG4191	Histidine kinase
AMBAS45_18405	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMBAS45_18410	COG0840	transmembrane signaling receptor activity
AMBAS45_18425	COG2855	membrane
AMBAS45_18430	COG2175	clavaminate synthase activity
AMBAS45_18435	COG0656	L-ascorbic acid biosynthetic process
AMBAS45_18455	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMBAS45_18460	COG4771	TonB-dependent receptor
AMBAS45_18480	COG3706	GGDEF domain
AMBAS45_18490	COG1472	Belongs to the glycosyl hydrolase 3 family
AMBAS45_18500	COG2723	6-phospho-beta-galactosidase activity
AMBAS45_18505	COG1609	Transcriptional regulator
AMBAS45_18510	COG2814	Major facilitator Superfamily
AMBAS45_18510	COG0477	Major facilitator Superfamily
AMBAS45_18515	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AMBAS45_18520	COG4988	ABC transporter
AMBAS45_18525	COG4890	Cyd operon protein YbgT
AMBAS45_18530	COG1294	oxidase, subunit
AMBAS45_18570	COG4319	ketosteroid isomerase
AMBAS45_18580	COG4771	TonB-dependent receptor
AMBAS45_18595	COG1469	GTP cyclohydrolase I activity
AMBAS45_18640	COG3237	CsbD-like
AMBAS45_18655	COG1595	DNA-templated transcription, initiation
AMBAS45_18685	COG0596	Alpha beta hydrolase
AMBAS45_18685	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMBAS45_18710	COG3038	cytochrome b561
AMBAS45_18715	COG2353	YceI-like domain
AMBAS45_18720	COG1252	NADH dehydrogenase
AMBAS45_18725	COG4206	TonB-dependent receptor
AMBAS45_18740	COG0583	DNA-binding transcription factor activity
AMBAS45_18745	COG2067	long-chain fatty acid transport protein
AMBAS45_18750	COG2130	NADP-dependent
AMBAS45_18755	COG2203	Gaf domain
AMBAS45_18755	COG3706	GGDEF domain
AMBAS45_18755	COG4251	negative regulation of phosphorylation
AMBAS45_18755	COG5001	Diguanylate cyclase
AMBAS45_18760	COG0784	Response regulator, receiver
AMBAS45_18760	COG2205	protein histidine kinase activity
AMBAS45_18770	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMBAS45_18775	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AMBAS45_18780	COG1349	DNA-binding transcription factor activity
AMBAS45_18785	COG0673	inositol 2-dehydrogenase activity
AMBAS45_18800	COG0697	spore germination
AMBAS45_18805	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AMBAS45_18810	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AMBAS45_18815	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AMBAS45_18820	COG1166	arginine decarboxylase activity
AMBAS45_18830	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AMBAS45_18835	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AMBAS45_18840	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AMBAS45_18910	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMBAS45_18920	COG0109	protoheme IX farnesyltransferase activity
AMBAS45_18940	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AMBAS45_18985	COG1324	tolerance protein
AMBAS45_18990	COG4232	protein-disulfide reductase activity
AMBAS45_18995	COG0739	heme binding
AMBAS45_19005	COG0511	ligase activity, forming carbon-carbon bonds
AMBAS45_19010	COG0439	Biotin carboxylase
AMBAS45_19020	COG3344	reverse transcriptase
AMBAS45_19065	COG0154	amidase activity
AMBAS45_19080	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMBAS45_19085	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AMBAS45_19100	COG0151	Belongs to the GarS family
AMBAS45_19110	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AMBAS45_19115	COG3954	Phosphoribulokinase
AMBAS45_19125	COG0745	RESPONSE REGULATOR receiver
AMBAS45_19140	COG1501	Belongs to the glycosyl hydrolase 31 family
AMBAS45_19155	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AMBAS45_19165	COG3031	protein transport across the cell outer membrane
AMBAS45_19175	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AMBAS45_19180	COG1459	type II secretion system
AMBAS45_19185	COG2165	general secretion pathway protein
AMBAS45_19190	COG2165	general secretion pathway protein
AMBAS45_19195	COG2165	general secretion pathway protein
AMBAS45_19200	COG4795	General secretion pathway protein
AMBAS45_19215	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AMBAS45_19235	COG1012	belongs to the aldehyde dehydrogenase family
AMBAS45_19245	COG1011	Hydrolase
AMBAS45_19250	COG0494	nUDIX hydrolase
AMBAS45_19255	COG1218	3'(2'),5'-bisphosphate nucleotidase
AMBAS45_19270	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
AMBAS45_19280	COG3089	Belongs to the UPF0270 family
AMBAS45_19285	COG0429	hydrolase of the alpha beta-hydrolase fold
AMBAS45_19305	COG0488	(ABC) transporter
AMBAS45_19335	COG0545	Peptidyl-prolyl cis-trans isomerase
AMBAS45_19345	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMBAS45_19350	COG2183	response to ionizing radiation
AMBAS45_19370	COG0596	Alpha beta hydrolase
AMBAS45_19375	COG1040	competence protein
AMBAS45_19395	COG1794	racemase activity, acting on amino acids and derivatives
AMBAS45_19410	COG0534	Mate efflux family protein
AMBAS45_19425	COG1999	signal sequence binding
AMBAS45_19430	COG0109	protoheme IX farnesyltransferase activity
AMBAS45_19435	COG1612	heme a metabolic process
AMBAS45_19460	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
AMBAS45_19465	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AMBAS45_19470	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AMBAS45_19480	COG2199	diguanylate cyclase activity
AMBAS45_19480	COG2203	Gaf domain
AMBAS45_19495	COG0129	dihydroxy-acid dehydratase activity
AMBAS45_19500	COG2860	membrane
AMBAS45_19505	COG0606	chelatase, subunit chli
AMBAS45_19510	COG0583	DNA-binding transcription factor activity
AMBAS45_19520	COG2814	Major facilitator Superfamily
AMBAS45_19530	COG0729	surface antigen
AMBAS45_19535	COG2911	Protein conserved in bacteria
AMBAS45_19560	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMBAS45_19570	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AMBAS45_19590	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AMBAS45_19615	COG1228	amidohydrolase
AMBAS45_19640	COG0425	Belongs to the sulfur carrier protein TusA family
AMBAS45_19655	COG1561	YicC-like family, N-terminal region
AMBAS45_19675	COG2856	Zn peptidase
AMBAS45_19690	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AMBAS45_19715	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
AMBAS45_20101	COG4679	PFAM Phage derived protein Gp49-like (DUF891)