AMBAS45_00005 SM00382 ATPases associated with a variety of cellular activities AMBAS45_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AMBAS45_00010 SM00480 DNA polymerase III beta subunit AMBAS45_00020 SM00387 Histidine kinase-like ATPases AMBAS45_00020 SM00433 TopoisomeraseII AMBAS45_00045 SM00836 DALR anticodon binding domain AMBAS45_00085 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMBAS45_00085 SM00474 3'-5' exonuclease AMBAS45_00085 SM00475 5'-3' exonuclease AMBAS45_00085 SM00482 DNA polymerase A domain AMBAS45_00120 SM00257 Lysin motif AMBAS45_00190 SM00481 DNA polymerase alpha chain like domain AMBAS45_00275 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBAS45_00275 SM01232 AMBAS45_00275 AMBAS45_00300 SM00052 Putative diguanylate phosphodiesterase AMBAS45_00300 SM00267 diguanylate cyclase AMBAS45_00310 SM00829 Enoylreductase AMBAS45_00315 SM00450 Rhodanese Homology Domain AMBAS45_00350 SM00052 Putative diguanylate phosphodiesterase AMBAS45_00350 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_00350 SM00267 diguanylate cyclase AMBAS45_00385 SM00849 Metallo-beta-lactamase superfamily AMBAS45_00465 SM00849 Metallo-beta-lactamase superfamily AMBAS45_00485 SM00876 Biotin and Thiamin Synthesis associated domain AMBAS45_00535 SM00267 diguanylate cyclase AMBAS45_00545 SM00072 Guanylate kinase homologues. AMBAS45_00550 SM01409 AMBAS45_00550 AMBAS45_00555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBAS45_00555 SM00954 Region found in RelA / SpoT proteins AMBAS45_00570 SM00487 DEAD-like helicases superfamily AMBAS45_00570 SM00490 helicase superfamily c-terminal domain AMBAS45_00600 SM00382 ATPases associated with a variety of cellular activities AMBAS45_00625 SM00052 Putative diguanylate phosphodiesterase AMBAS45_00625 SM01034 Sensors of blue-light using FAD AMBAS45_00630 SM00267 diguanylate cyclase AMBAS45_00700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_00720 SM00052 Putative diguanylate phosphodiesterase AMBAS45_00720 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_00720 SM00267 diguanylate cyclase AMBAS45_00735 SM00341 Helicase and RNase D C-terminal AMBAS45_00735 SM00487 DEAD-like helicases superfamily AMBAS45_00735 SM00490 helicase superfamily c-terminal domain AMBAS45_00735 SM00956 AMBAS45_00735 AMBAS45_00745 SM00924 MgtE intracellular N domain AMBAS45_00755 SM00267 diguanylate cyclase AMBAS45_00755 SM00448 cheY-homologous receiver domain AMBAS45_00765 SM00971 Serine acetyltransferase, N-terminal AMBAS45_00770 SM00267 diguanylate cyclase AMBAS45_00810 SM00014 Acid phosphatase homologues AMBAS45_00850 SM01130 AMBAS45_00850 AMBAS45_00855 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBAS45_00865 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBAS45_00915 SM00354 helix_turn _helix lactose operon repressor AMBAS45_00980 SM00420 helix_turn_helix, Deoxyribose operon repressor AMBAS45_00980 SM01134 AMBAS45_00980 AMBAS45_01020 SM00965 Secretin and TonB N terminus short domain AMBAS45_01030 SM00028 Tetratricopeptide repeats AMBAS45_01035 SM00382 ATPases associated with a variety of cellular activities AMBAS45_01110 SM00316 Ribosomal protein S1-like RNA-binding domain AMBAS45_01145 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_01150 SM01038 Beta galactosidase small chain AMBAS45_01155 SM00448 cheY-homologous receiver domain AMBAS45_01155 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_01160 SM00387 Histidine kinase-like ATPases AMBAS45_01185 SM00478 endonuclease III AMBAS45_01185 SM00525 AMBAS45_01185 AMBAS45_01285 SM00448 cheY-homologous receiver domain AMBAS45_01285 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_01290 SM00387 Histidine kinase-like ATPases AMBAS45_01330 SM00422 helix_turn_helix, mercury resistance AMBAS45_01420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_01425 SM00448 cheY-homologous receiver domain AMBAS45_01430 SM00073 Histidine Phosphotransfer domain AMBAS45_01430 SM00260 Two component signalling adaptor domain AMBAS45_01430 SM00387 Histidine kinase-like ATPases AMBAS45_01430 SM01231 AMBAS45_01430 AMBAS45_01435 SM00260 Two component signalling adaptor domain AMBAS45_01440 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_01440 SM00091 PAS domain AMBAS45_01440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_01445 SM00138 Methyltransferase, chemotaxis proteins AMBAS45_01455 SM00448 cheY-homologous receiver domain AMBAS45_01460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_01465 SM00448 cheY-homologous receiver domain AMBAS45_01470 SM00073 Histidine Phosphotransfer domain AMBAS45_01470 SM00260 Two component signalling adaptor domain AMBAS45_01470 SM00387 Histidine kinase-like ATPases AMBAS45_01470 SM01231 AMBAS45_01470 AMBAS45_01475 SM00260 Two component signalling adaptor domain AMBAS45_01480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_01480 SM00091 PAS domain AMBAS45_01480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_01480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_01485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_01485 SM00091 PAS domain AMBAS45_01485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_01485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_01490 SM00138 Methyltransferase, chemotaxis proteins AMBAS45_01500 SM00448 cheY-homologous receiver domain AMBAS45_01520 SM00354 helix_turn _helix lactose operon repressor AMBAS45_01535 SM00267 diguanylate cyclase AMBAS45_01555 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_01555 SM00387 Histidine kinase-like ATPases AMBAS45_01555 SM00448 cheY-homologous receiver domain AMBAS45_01570 SM00354 helix_turn _helix lactose operon repressor AMBAS45_01620 SM00855 Phosphoglycerate mutase family AMBAS45_01635 SM00671 Sel1-like repeats. AMBAS45_01640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_01640 SM00382 ATPases associated with a variety of cellular activities AMBAS45_01645 SM01403 AMBAS45_01645 AMBAS45_01665 SM01382 AMBAS45_01665 AMBAS45_01665 SM01383 AMBAS45_01665 AMBAS45_01680 SM00322 K homology RNA-binding domain AMBAS45_01725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_01725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_01760 SM00487 DEAD-like helicases superfamily AMBAS45_01760 SM00490 helicase superfamily c-terminal domain AMBAS45_01760 SM00847 Helicase associated domain (HA2) Add an annotation AMBAS45_01800 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_01810 SM00938 Nitrogen regulatory protein P-II AMBAS45_01870 SM00073 Histidine Phosphotransfer domain AMBAS45_01870 SM00387 Histidine kinase-like ATPases AMBAS45_01870 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_01870 SM00448 cheY-homologous receiver domain AMBAS45_01875 SM00434 DNA Topoisomerase IV AMBAS45_01885 SM00052 Putative diguanylate phosphodiesterase AMBAS45_01885 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_01885 SM00091 PAS domain AMBAS45_01885 SM00267 diguanylate cyclase AMBAS45_01890 SM01150 AMBAS45_01890 AMBAS45_01965 SM00965 Secretin and TonB N terminus short domain AMBAS45_01985 SM00842 Cell division protein FtsA AMBAS45_01995 SM00919 Malic enzyme, NAD binding domain AMBAS45_01995 SM01274 AMBAS45_01995 AMBAS45_02015 SM01060 AMBAS45_02015 AMBAS45_02080 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMBAS45_02085 SM00851 MGS-like domain AMBAS45_02110 SM00448 cheY-homologous receiver domain AMBAS45_02110 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_02115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_02115 SM00387 Histidine kinase-like ATPases AMBAS45_02115 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_02135 SM00382 ATPases associated with a variety of cellular activities AMBAS45_02165 SM00450 Rhodanese Homology Domain AMBAS45_02205 SM00479 AMBAS45_02205 AMBAS45_02215 SM00028 Tetratricopeptide repeats AMBAS45_02290 SM00267 diguanylate cyclase AMBAS45_02295 SM01004 Delta-aminolevulinic acid dehydratase AMBAS45_02305 SM00487 DEAD-like helicases superfamily AMBAS45_02305 SM00490 helicase superfamily c-terminal domain AMBAS45_02315 SM00357 Cold shock protein domain AMBAS45_02315 SM00382 ATPases associated with a variety of cellular activities AMBAS45_02315 SM00959 Rho termination factor, N-terminal domain AMBAS45_02325 SM00387 Histidine kinase-like ATPases AMBAS45_02325 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_02325 SM00448 cheY-homologous receiver domain AMBAS45_02335 SM01001 AIR carboxylase AMBAS45_02395 SM00788 Adenylosuccinate synthetase AMBAS45_02450 SM01005 Alanine racemase, C-terminal domain AMBAS45_02480 SM00062 Bacterial periplasmic substrate-binding proteins AMBAS45_02675 SM00257 Lysin motif AMBAS45_02715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_02715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_02715 SM01049 AMBAS45_02715 AMBAS45_02745 SM00448 cheY-homologous receiver domain AMBAS45_02745 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_02750 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_02755 SM00287 Bacterial SH3 domain homologues AMBAS45_02760 SM01118 AMBAS45_02760 AMBAS45_02770 SM00927 DNA mismatch repair enzyme MutH AMBAS45_02780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_02800 SM00448 cheY-homologous receiver domain AMBAS45_02805 SM00267 diguanylate cyclase AMBAS45_02810 SM00387 Histidine kinase-like ATPases AMBAS45_02810 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_02810 SM00448 cheY-homologous receiver domain AMBAS45_02835 SM00487 DEAD-like helicases superfamily AMBAS45_02835 SM00490 helicase superfamily c-terminal domain AMBAS45_02840 SM00530 Helix-turn-helix XRE-family like proteins AMBAS45_02850 SM00670 Large family of predicted nucleotide-binding domains AMBAS45_02855 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBAS45_02885 SM00487 DEAD-like helicases superfamily AMBAS45_02885 SM00490 helicase superfamily c-terminal domain AMBAS45_02890 SM00028 Tetratricopeptide repeats AMBAS45_02930 SM00387 Histidine kinase-like ATPases AMBAS45_02930 SM00433 TopoisomeraseII AMBAS45_02965 SM00841 Elongation factor P, C-terminal AMBAS45_02965 SM01185 AMBAS45_02965 AMBAS45_03010 SM00014 Acid phosphatase homologues AMBAS45_03020 SM01012 AMBAS45_03020 AMBAS45_03050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMBAS45_03070 SM00267 diguanylate cyclase AMBAS45_03075 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_03075 SM00091 PAS domain AMBAS45_03075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_03090 SM00382 ATPases associated with a variety of cellular activities AMBAS45_03150 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMBAS45_03155 SM01007 Class II Aldolase and Adducin N-terminal domain AMBAS45_03185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_03185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_03195 SM00400 zinc finger AMBAS45_03195 SM00493 AMBAS45_03195 AMBAS45_03195 SM00766 DNA primase DnaG DnaB-binding AMBAS45_03220 SM01207 AMBAS45_03220 AMBAS45_03225 SM00905 Dihydroneopterin aldolase AMBAS45_03260 SM00530 Helix-turn-helix XRE-family like proteins AMBAS45_03270 SM00387 Histidine kinase-like ATPases AMBAS45_03275 SM00448 cheY-homologous receiver domain AMBAS45_03275 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_03280 SM00387 Histidine kinase-like ATPases AMBAS45_03280 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_03290 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBAS45_03295 SM00710 Parallel beta-helix repeats AMBAS45_03330 SM00028 Tetratricopeptide repeats AMBAS45_03335 SM00448 cheY-homologous receiver domain AMBAS45_03335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBAS45_03340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_03340 SM00091 PAS domain AMBAS45_03340 SM00387 Histidine kinase-like ATPases AMBAS45_03340 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_03340 SM00448 cheY-homologous receiver domain AMBAS45_03345 SM00897 FIST N domain AMBAS45_03345 SM01204 AMBAS45_03345 AMBAS45_03375 SM00387 Histidine kinase-like ATPases AMBAS45_03375 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_03375 SM00448 cheY-homologous receiver domain AMBAS45_03380 SM00028 Tetratricopeptide repeats AMBAS45_03415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_03415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_03430 SM00650 Ribosomal RNA adenine dimethylases AMBAS45_03455 SM00271 DnaJ molecular chaperone homology domain AMBAS45_03500 SM00954 Region found in RelA / SpoT proteins AMBAS45_03545 SM00822 AMBAS45_03545 AMBAS45_03550 SM01236 AMBAS45_03550 AMBAS45_03595 SM00387 Histidine kinase-like ATPases AMBAS45_03595 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_03600 SM00448 cheY-homologous receiver domain AMBAS45_03600 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_03630 SM00965 Secretin and TonB N terminus short domain AMBAS45_03635 SM00631 AMBAS45_03635 AMBAS45_03680 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_03685 SM00924 MgtE intracellular N domain AMBAS45_03715 SM00382 ATPases associated with a variety of cellular activities AMBAS45_03745 SM00382 ATPases associated with a variety of cellular activities AMBAS45_03780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBAS45_03785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBAS45_03870 SM00354 helix_turn _helix lactose operon repressor AMBAS45_03965 SM00861 Transketolase, pyrimidine binding domain AMBAS45_03970 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBAS45_04045 SM00382 ATPases associated with a variety of cellular activities AMBAS45_04100 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBAS45_04110 SM01263 AMBAS45_04110 AMBAS45_04130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_04185 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBAS45_04185 SM00866 AMBAS45_04185 AMBAS45_04225 SM00382 ATPases associated with a variety of cellular activities AMBAS45_04260 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMBAS45_04290 SM00850 LytTr DNA-binding domain AMBAS45_04305 SM00448 cheY-homologous receiver domain AMBAS45_04310 SM00091 PAS domain AMBAS45_04330 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBAS45_04340 SM00487 DEAD-like helicases superfamily AMBAS45_04340 SM00490 helicase superfamily c-terminal domain AMBAS45_04350 SM00382 ATPases associated with a variety of cellular activities AMBAS45_04360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBAS45_04375 SM01329 AMBAS45_04375 AMBAS45_04380 SM00917 LeuA allosteric (dimerisation) domain AMBAS45_04400 SM00710 Parallel beta-helix repeats AMBAS45_04430 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBAS45_04430 SM00895 AMBAS45_04430 AMBAS45_04460 SM01192 AMBAS45_04460 AMBAS45_04460 SM01193 AMBAS45_04460 AMBAS45_04470 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMBAS45_04470 SM00534 ATPase domain of DNA mismatch repair MUTS family AMBAS45_04480 SM00382 ATPases associated with a variety of cellular activities AMBAS45_04485 SM00382 ATPases associated with a variety of cellular activities AMBAS45_04505 SM00382 ATPases associated with a variety of cellular activities AMBAS45_04575 SM00382 ATPases associated with a variety of cellular activities AMBAS45_04615 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBAS45_04620 SM01329 AMBAS45_04620 AMBAS45_04635 SM00267 diguanylate cyclase AMBAS45_04695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBAS45_04740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBAS45_04750 SM00935 Outer membrane protein (OmpH-like) AMBAS45_04775 SM00481 DNA polymerase alpha chain like domain AMBAS45_04790 SM00267 diguanylate cyclase AMBAS45_04815 SM00062 Bacterial periplasmic substrate-binding proteins AMBAS45_04820 SM01211 AMBAS45_04820 AMBAS45_04850 SM00858 AMBAS45_04850 AMBAS45_04855 SM00260 Two component signalling adaptor domain AMBAS45_04855 SM00448 cheY-homologous receiver domain AMBAS45_04860 SM00138 Methyltransferase, chemotaxis proteins AMBAS45_04905 SM00047 Lysozyme subfamily 2 AMBAS45_05030 SM00858 AMBAS45_05030 AMBAS45_05055 SM00382 ATPases associated with a variety of cellular activities AMBAS45_05060 SM00387 Histidine kinase-like ATPases AMBAS45_05060 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_05065 SM00382 ATPases associated with a variety of cellular activities AMBAS45_05065 SM00448 cheY-homologous receiver domain AMBAS45_05090 SM00382 ATPases associated with a variety of cellular activities AMBAS45_05155 SM00382 ATPases associated with a variety of cellular activities AMBAS45_05155 SM00962 SRP54-type protein, GTPase domain AMBAS45_05170 SM00448 cheY-homologous receiver domain AMBAS45_05180 SM00073 Histidine Phosphotransfer domain AMBAS45_05180 SM00260 Two component signalling adaptor domain AMBAS45_05180 SM00387 Histidine kinase-like ATPases AMBAS45_05180 SM01231 AMBAS45_05180 AMBAS45_05185 SM00448 cheY-homologous receiver domain AMBAS45_05195 SM00260 Two component signalling adaptor domain AMBAS45_05200 SM00260 Two component signalling adaptor domain AMBAS45_05210 SM00028 Tetratricopeptide repeats AMBAS45_05225 SM01018 B12 binding domain AMBAS45_05240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_05240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_05255 SM00947 Carbonic anhydrase AMBAS45_05290 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMBAS45_05320 SM00382 ATPases associated with a variety of cellular activities AMBAS45_05325 SM00382 ATPases associated with a variety of cellular activities AMBAS45_05345 SM00382 ATPases associated with a variety of cellular activities AMBAS45_05370 SM00091 PAS domain AMBAS45_05370 SM00382 ATPases associated with a variety of cellular activities AMBAS45_05385 SM00344 helix_turn_helix ASNC type AMBAS45_05390 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBAS45_05440 SM00028 Tetratricopeptide repeats AMBAS45_05520 SM00829 Enoylreductase AMBAS45_05535 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBAS45_05545 SM00448 cheY-homologous receiver domain AMBAS45_05545 SM00850 LytTr DNA-binding domain AMBAS45_05565 SM00836 DALR anticodon binding domain AMBAS45_05565 SM01016 Arginyl tRNA synthetase N terminal dom AMBAS45_05580 SM00564 beta-propeller repeat AMBAS45_05585 SM00421 helix_turn_helix, Lux Regulon AMBAS45_05585 SM00448 cheY-homologous receiver domain AMBAS45_05590 SM00052 Putative diguanylate phosphodiesterase AMBAS45_05590 SM00267 diguanylate cyclase AMBAS45_05610 SM00267 diguanylate cyclase AMBAS45_05630 SM00267 diguanylate cyclase AMBAS45_05660 SM00937 AMBAS45_05660 AMBAS45_05725 SM00463 Small MutS-related domain AMBAS45_05755 SM00763 PrkA AAA domain AMBAS45_05785 SM00965 Secretin and TonB N terminus short domain AMBAS45_05800 SM00479 AMBAS45_05800 AMBAS45_05825 SM00357 Cold shock protein domain AMBAS45_05845 SM00478 endonuclease III AMBAS45_05855 SM00900 AMBAS45_05855 AMBAS45_05885 SM00487 DEAD-like helicases superfamily AMBAS45_05885 SM00490 helicase superfamily c-terminal domain AMBAS45_05960 SM00267 diguanylate cyclase AMBAS45_05985 SM00028 Tetratricopeptide repeats AMBAS45_05990 SM00327 von Willebrand factor (vWF) type A domain AMBAS45_06030 SM00052 Putative diguanylate phosphodiesterase AMBAS45_06030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_06030 SM00267 diguanylate cyclase AMBAS45_06040 SM00855 Phosphoglycerate mutase family AMBAS45_06050 SM01091 Transporter associated domain AMBAS45_06060 SM00382 ATPases associated with a variety of cellular activities AMBAS45_06060 SM00962 SRP54-type protein, GTPase domain AMBAS45_06060 SM00963 SRP54-type protein, helical bundle domain AMBAS45_06105 SM00382 ATPases associated with a variety of cellular activities AMBAS45_06165 SM00830 Chorismate mutase type II AMBAS45_06190 SM00267 diguanylate cyclase AMBAS45_06195 SM00830 Chorismate mutase type II AMBAS45_06200 SM00448 cheY-homologous receiver domain AMBAS45_06215 SM00331 Sigma factor PP2C-like phosphatases AMBAS45_06215 SM00448 cheY-homologous receiver domain AMBAS45_06225 SM00052 Putative diguanylate phosphodiesterase AMBAS45_06225 SM00267 diguanylate cyclase AMBAS45_06235 SM00387 Histidine kinase-like ATPases AMBAS45_06235 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_06245 SM00382 ATPases associated with a variety of cellular activities AMBAS45_06245 SM00448 cheY-homologous receiver domain AMBAS45_06250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_06275 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBAS45_06280 SM00382 ATPases associated with a variety of cellular activities AMBAS45_06345 SM00778 Zinc-binding domain of primase-helicase AMBAS45_06345 SM00885 D5 N terminal like AMBAS45_06410 SM00028 Tetratricopeptide repeats AMBAS45_06410 SM00387 Histidine kinase-like ATPases AMBAS45_06410 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_06410 SM00448 cheY-homologous receiver domain AMBAS45_06420 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMBAS45_06430 SM00267 diguanylate cyclase AMBAS45_06450 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBAS45_06490 SM00267 diguanylate cyclase AMBAS45_06555 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBAS45_06555 SM00876 Biotin and Thiamin Synthesis associated domain AMBAS45_06580 SM00226 Low molecular weight phosphatase family AMBAS45_06590 SM00382 ATPases associated with a variety of cellular activities AMBAS45_06610 SM00387 Histidine kinase-like ATPases AMBAS45_06610 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_06615 SM00448 cheY-homologous receiver domain AMBAS45_06615 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_06640 SM00382 ATPases associated with a variety of cellular activities AMBAS45_06650 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBAS45_06660 SM00028 Tetratricopeptide repeats AMBAS45_06660 SM00448 cheY-homologous receiver domain AMBAS45_06695 SM01321 AMBAS45_06695 AMBAS45_06710 SM00382 ATPases associated with a variety of cellular activities AMBAS45_06725 SM00905 Dihydroneopterin aldolase AMBAS45_06735 SM00387 Histidine kinase-like ATPases AMBAS45_06740 SM00448 cheY-homologous receiver domain AMBAS45_06740 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_06810 SM00363 S4 RNA-binding domain AMBAS45_06820 SM01266 AMBAS45_06820 AMBAS45_06900 SM00421 helix_turn_helix, Lux Regulon AMBAS45_06900 SM00448 cheY-homologous receiver domain AMBAS45_06920 SM00448 cheY-homologous receiver domain AMBAS45_06920 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_06925 SM00387 Histidine kinase-like ATPases AMBAS45_06925 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_06945 SM00020 Trypsin-like serine protease AMBAS45_06965 SM00387 Histidine kinase-like ATPases AMBAS45_06965 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_06965 SM00448 cheY-homologous receiver domain AMBAS45_06980 SM00271 DnaJ molecular chaperone homology domain AMBAS45_06995 SM00052 Putative diguanylate phosphodiesterase AMBAS45_06995 SM00091 PAS domain AMBAS45_07015 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMBAS45_07020 SM00851 MGS-like domain AMBAS45_07020 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMBAS45_07075 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBAS45_07075 SM01091 Transporter associated domain AMBAS45_07090 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBAS45_07140 SM00903 Flavin reductase like domain AMBAS45_07185 SM00829 Enoylreductase AMBAS45_07195 SM01400 AMBAS45_07195 AMBAS45_07215 SM00937 AMBAS45_07215 AMBAS45_07225 SM00448 cheY-homologous receiver domain AMBAS45_07265 SM00838 Elongation factor G C-terminus AMBAS45_07265 SM00889 Elongation factor G, domain IV AMBAS45_07270 SM01116 AMBAS45_07270 AMBAS45_07275 SM00219 Tyrosine kinase, catalytic domain AMBAS45_07275 SM00331 Sigma factor PP2C-like phosphatases AMBAS45_07275 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMBAS45_07285 SM00460 Transglutaminase/protease-like homologues AMBAS45_07315 SM00052 Putative diguanylate phosphodiesterase AMBAS45_07315 SM00267 diguanylate cyclase AMBAS45_07390 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBAS45_07440 SM00864 Tubulin/FtsZ family, GTPase domain AMBAS45_07440 SM00865 Tubulin/FtsZ family, C-terminal domain AMBAS45_07475 SM00506 Appr-1"-p processing enzyme AMBAS45_07495 SM00507 HNH nucleases AMBAS45_07500 SM00487 DEAD-like helicases superfamily AMBAS45_07500 SM00490 helicase superfamily c-terminal domain AMBAS45_07515 SM00487 DEAD-like helicases superfamily AMBAS45_07515 SM00490 helicase superfamily c-terminal domain AMBAS45_07525 SM00382 ATPases associated with a variety of cellular activities AMBAS45_07540 SM00382 ATPases associated with a variety of cellular activities AMBAS45_07570 SM00487 DEAD-like helicases superfamily AMBAS45_07570 SM00490 helicase superfamily c-terminal domain AMBAS45_07595 SM00052 Putative diguanylate phosphodiesterase AMBAS45_07595 SM00091 PAS domain AMBAS45_07595 SM00267 diguanylate cyclase AMBAS45_07600 SM00052 Putative diguanylate phosphodiesterase AMBAS45_07600 SM00267 diguanylate cyclase AMBAS45_07640 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBAS45_07660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_07660 SM00091 PAS domain AMBAS45_07660 SM00267 diguanylate cyclase AMBAS45_07690 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBAS45_07695 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMBAS45_07735 SM00267 diguanylate cyclase AMBAS45_07735 SM00448 cheY-homologous receiver domain AMBAS45_07740 SM00387 Histidine kinase-like ATPases AMBAS45_07740 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_07740 SM00448 cheY-homologous receiver domain AMBAS45_07830 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMBAS45_07900 SM00052 Putative diguanylate phosphodiesterase AMBAS45_07900 SM00267 diguanylate cyclase AMBAS45_08005 SM00710 Parallel beta-helix repeats AMBAS45_08050 SM00873 B3/4 domain AMBAS45_08050 SM00874 tRNA synthetase B5 domain AMBAS45_08050 SM00896 Ferredoxin-fold anticodon binding domain AMBAS45_08055 SM00411 bacterial (prokaryotic) histone like domain AMBAS45_08100 SM00487 DEAD-like helicases superfamily AMBAS45_08100 SM00490 helicase superfamily c-terminal domain AMBAS45_08100 SM00982 AMBAS45_08100 AMBAS45_08100 SM01058 CarD-like/TRCF domain AMBAS45_08120 SM00387 Histidine kinase-like ATPases AMBAS45_08125 SM00897 FIST N domain AMBAS45_08125 SM01204 AMBAS45_08125 AMBAS45_08205 SM00878 Biotin carboxylase C-terminal domain AMBAS45_08225 SM00422 helix_turn_helix, mercury resistance AMBAS45_08245 SM00062 Bacterial periplasmic substrate-binding proteins AMBAS45_08245 SM00267 diguanylate cyclase AMBAS45_08255 SM00479 AMBAS45_08255 AMBAS45_08260 SM00387 Histidine kinase-like ATPases AMBAS45_08260 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_08260 SM00448 cheY-homologous receiver domain AMBAS45_08270 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBAS45_08285 SM00267 diguanylate cyclase AMBAS45_08290 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_08300 SM00382 ATPases associated with a variety of cellular activities AMBAS45_08300 SM00487 DEAD-like helicases superfamily AMBAS45_08300 SM00490 helicase superfamily c-terminal domain AMBAS45_08300 SM00847 Helicase associated domain (HA2) Add an annotation AMBAS45_08315 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMBAS45_08320 SM00829 Enoylreductase AMBAS45_08330 SM00479 AMBAS45_08330 AMBAS45_08340 SM00052 Putative diguanylate phosphodiesterase AMBAS45_08345 SM00382 ATPases associated with a variety of cellular activities AMBAS45_08360 SM00634 Bacterial Ig-like domain (group 1) AMBAS45_08370 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMBAS45_08370 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMBAS45_08370 SM00493 AMBAS45_08370 AMBAS45_08435 SM00448 cheY-homologous receiver domain AMBAS45_08435 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_08440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_08440 SM00387 Histidine kinase-like ATPases AMBAS45_08440 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_08445 SM00587 ZnF_C4 abd HLH domain containing kinases domain AMBAS45_08450 SM00316 Ribosomal protein S1-like RNA-binding domain AMBAS45_08455 SM00363 S4 RNA-binding domain AMBAS45_08490 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMBAS45_08495 SM00822 AMBAS45_08495 AMBAS45_08505 SM00825 Beta-ketoacyl synthase AMBAS45_08545 SM00267 diguanylate cyclase AMBAS45_08650 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMBAS45_08695 SM00448 cheY-homologous receiver domain AMBAS45_08695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBAS45_08705 SM00316 Ribosomal protein S1-like RNA-binding domain AMBAS45_08725 SM01387 AMBAS45_08725 AMBAS45_08730 SM00091 PAS domain AMBAS45_08730 SM00267 diguanylate cyclase AMBAS45_08735 SM00363 S4 RNA-binding domain AMBAS45_08750 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBAS45_08755 SM00448 cheY-homologous receiver domain AMBAS45_08825 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBAS45_08865 SM00382 ATPases associated with a variety of cellular activities AMBAS45_08880 SM00477 DNA/RNA non-specific endonuclease AMBAS45_08880 SM00892 DNA/RNA non-specific endonuclease AMBAS45_08895 SM00829 Enoylreductase AMBAS45_08960 SM00382 ATPases associated with a variety of cellular activities AMBAS45_08985 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBAS45_09000 SM00028 Tetratricopeptide repeats AMBAS45_09030 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBAS45_09055 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMBAS45_09060 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMBAS45_09090 SM00357 Cold shock protein domain AMBAS45_09100 SM00382 ATPases associated with a variety of cellular activities AMBAS45_09100 SM01086 C-terminal, D2-small domain, of ClpB protein AMBAS45_09105 SM00316 Ribosomal protein S1-like RNA-binding domain AMBAS45_09130 SM00731 SprT homologues. AMBAS45_09160 SM00870 AMBAS45_09160 AMBAS45_09165 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBAS45_09180 SM00936 Penicillin-binding protein 5, C-terminal domain AMBAS45_09255 SM01103 AMBAS45_09255 AMBAS45_09265 SM00382 ATPases associated with a variety of cellular activities AMBAS45_09290 SM00052 Putative diguanylate phosphodiesterase AMBAS45_09290 SM00267 diguanylate cyclase AMBAS45_09290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_09305 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBAS45_09310 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMBAS45_09310 SM00195 Dual specificity phosphatase, catalytic domain AMBAS45_09310 SM00404 Protein tyrosine phosphatase, catalytic domain motif AMBAS45_09360 SM00507 HNH nucleases AMBAS45_09365 SM00316 Ribosomal protein S1-like RNA-binding domain AMBAS45_09365 SM00322 K homology RNA-binding domain AMBAS45_09390 SM01321 AMBAS45_09390 AMBAS45_09510 SM00028 Tetratricopeptide repeats AMBAS45_09530 SM00771 ZipA, C-terminal domain (FtsZ-binding) AMBAS45_09535 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBAS45_09535 SM00292 breast cancer carboxy-terminal domain AMBAS45_09535 SM00532 Ligase N family AMBAS45_09550 SM00849 Metallo-beta-lactamase superfamily AMBAS45_09555 SM00382 ATPases associated with a variety of cellular activities AMBAS45_09580 SM00062 Bacterial periplasmic substrate-binding proteins AMBAS45_09585 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBAS45_09660 SM00861 Transketolase, pyrimidine binding domain AMBAS45_09675 SM00881 CoA binding domain AMBAS45_09715 SM00642 Alpha-amylase domain AMBAS45_09720 SM00642 Alpha-amylase domain AMBAS45_09730 SM00642 Alpha-amylase domain AMBAS45_09735 SM00354 helix_turn _helix lactose operon repressor AMBAS45_09850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBAS45_09865 SM00387 Histidine kinase-like ATPases AMBAS45_09870 SM00448 cheY-homologous receiver domain AMBAS45_09870 SM00850 LytTr DNA-binding domain AMBAS45_09885 SM00028 Tetratricopeptide repeats AMBAS45_09885 SM00448 cheY-homologous receiver domain AMBAS45_09895 SM00450 Rhodanese Homology Domain AMBAS45_09900 SM00054 EF-hand, calcium binding motif AMBAS45_09915 SM00487 DEAD-like helicases superfamily AMBAS45_09915 SM00490 helicase superfamily c-terminal domain AMBAS45_09920 SM00882 Coenzyme A transferase AMBAS45_09925 SM00882 Coenzyme A transferase AMBAS45_09940 SM00387 Histidine kinase-like ATPases AMBAS45_09985 SM00861 Transketolase, pyrimidine binding domain AMBAS45_10000 SM00220 Serine/Threonine protein kinases, catalytic domain AMBAS45_10035 SM00945 ProQ/FINO family AMBAS45_10040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBAS45_10040 SM00245 tail specific protease AMBAS45_10095 SM00981 AMBAS45_10095 AMBAS45_10105 SM00382 ATPases associated with a variety of cellular activities AMBAS45_10150 SM00100 Cyclic nucleotide-monophosphate binding domain AMBAS45_10150 SM00419 helix_turn_helix, cAMP Regulatory protein AMBAS45_10345 SM00450 Rhodanese Homology Domain AMBAS45_10355 SM01144 AMBAS45_10355 AMBAS45_10365 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBAS45_10365 SM00465 GIY-YIG type nucleases (URI domain) AMBAS45_10370 SM00421 helix_turn_helix, Lux Regulon AMBAS45_10370 SM00448 cheY-homologous receiver domain AMBAS45_10475 SM00382 ATPases associated with a variety of cellular activities AMBAS45_10485 SM00843 AMBAS45_10485 AMBAS45_10490 SM00344 helix_turn_helix ASNC type AMBAS45_10495 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMBAS45_10495 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMBAS45_10500 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMBAS45_10505 SM00028 Tetratricopeptide repeats AMBAS45_10520 SM00411 bacterial (prokaryotic) histone like domain AMBAS45_10525 SM00316 Ribosomal protein S1-like RNA-binding domain AMBAS45_10545 SM00434 DNA Topoisomerase IV AMBAS45_10570 SM00822 AMBAS45_10570 AMBAS45_10590 SM00052 Putative diguanylate phosphodiesterase AMBAS45_10590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_10590 SM00267 diguanylate cyclase AMBAS45_10595 SM00267 diguanylate cyclase AMBAS45_10615 SM01130 AMBAS45_10615 AMBAS45_10700 SM00421 helix_turn_helix, Lux Regulon AMBAS45_10700 SM00448 cheY-homologous receiver domain AMBAS45_10730 SM00642 Alpha-amylase domain AMBAS45_10740 SM00852 Probable molybdopterin binding domain AMBAS45_10760 SM00382 ATPases associated with a variety of cellular activities AMBAS45_10775 SM00530 Helix-turn-helix XRE-family like proteins AMBAS45_10785 SM00226 Low molecular weight phosphatase family AMBAS45_10840 SM00670 Large family of predicted nucleotide-binding domains AMBAS45_11005 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AMBAS45_11015 SM00563 Phosphate acyltransferases AMBAS45_11060 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_11100 SM00893 Electron transfer flavoprotein domain AMBAS45_11105 SM00893 Electron transfer flavoprotein domain AMBAS45_11115 SM00528 Domain in histone-like proteins of HNS family AMBAS45_11160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_11160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_11175 SM00797 Allophanate hydrolase subunit 2 AMBAS45_11180 SM00796 Allophanate hydrolase subunit 1 AMBAS45_11230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBAS45_11235 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBAS45_11270 SM00642 Alpha-amylase domain AMBAS45_11275 SM00829 Enoylreductase AMBAS45_11290 SM00855 Phosphoglycerate mutase family AMBAS45_11315 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBAS45_11320 SM00382 ATPases associated with a variety of cellular activities AMBAS45_11350 SM00852 Probable molybdopterin binding domain AMBAS45_11380 SM00422 helix_turn_helix, mercury resistance AMBAS45_11400 SM00422 helix_turn_helix, mercury resistance AMBAS45_11450 SM00974 AMBAS45_11450 AMBAS45_11520 SM00871 Bacterial transcription activator, effector binding domain AMBAS45_11555 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBAS45_11595 SM00052 Putative diguanylate phosphodiesterase AMBAS45_11595 SM00267 diguanylate cyclase AMBAS45_11600 SM00849 Metallo-beta-lactamase superfamily AMBAS45_11635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMBAS45_11655 SM00382 ATPases associated with a variety of cellular activities AMBAS45_11655 SM00448 cheY-homologous receiver domain AMBAS45_11665 SM00387 Histidine kinase-like ATPases AMBAS45_11665 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_11670 SM00448 cheY-homologous receiver domain AMBAS45_11675 SM00387 Histidine kinase-like ATPases AMBAS45_11675 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_11675 SM00448 cheY-homologous receiver domain AMBAS45_11745 SM00631 AMBAS45_11745 AMBAS45_11750 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBAS45_11765 SM01350 AMBAS45_11765 AMBAS45_11770 SM00642 Alpha-amylase domain AMBAS45_11775 SM00642 Alpha-amylase domain AMBAS45_11785 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBAS45_11850 SM00749 bacterial OsmY and nodulation domain AMBAS45_11910 SM00354 helix_turn _helix lactose operon repressor AMBAS45_11915 SM00858 AMBAS45_11915 AMBAS45_11955 SM00710 Parallel beta-helix repeats AMBAS45_11965 SM00387 Histidine kinase-like ATPases AMBAS45_11965 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_11965 SM00448 cheY-homologous receiver domain AMBAS45_11990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_11990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_12025 SM00052 Putative diguanylate phosphodiesterase AMBAS45_12025 SM00267 diguanylate cyclase AMBAS45_12035 SM01060 AMBAS45_12035 AMBAS45_12040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBAS45_12045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_12045 SM00387 Histidine kinase-like ATPases AMBAS45_12055 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_12075 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_12110 SM00849 Metallo-beta-lactamase superfamily AMBAS45_12115 SM00257 Lysin motif AMBAS45_12125 SM00840 AMBAS45_12125 AMBAS45_12145 SM00244 prohibitin homologues AMBAS45_12160 SM00642 Alpha-amylase domain AMBAS45_12170 SM00829 Enoylreductase AMBAS45_12175 SM00829 Enoylreductase AMBAS45_12190 SM00539 Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins. AMBAS45_12250 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMBAS45_12260 SM01007 Class II Aldolase and Adducin N-terminal domain AMBAS45_12265 SM00100 Cyclic nucleotide-monophosphate binding domain AMBAS45_12265 SM00419 helix_turn_helix, cAMP Regulatory protein AMBAS45_12280 SM00825 Beta-ketoacyl synthase AMBAS45_12340 SM00422 helix_turn_helix, mercury resistance AMBAS45_12350 SM00382 ATPases associated with a variety of cellular activities AMBAS45_12360 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMBAS45_12375 SM00387 Histidine kinase-like ATPases AMBAS45_12375 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_12375 SM00448 cheY-homologous receiver domain AMBAS45_12415 SM00028 Tetratricopeptide repeats AMBAS45_12490 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBAS45_12530 SM00341 Helicase and RNase D C-terminal AMBAS45_12530 SM00474 3'-5' exonuclease AMBAS45_12560 SM00487 DEAD-like helicases superfamily AMBAS45_12560 SM00488 AMBAS45_12560 AMBAS45_12560 SM00491 AMBAS45_12560 AMBAS45_12595 SM00014 Acid phosphatase homologues AMBAS45_12605 SM00642 Alpha-amylase domain AMBAS45_12635 SM00849 Metallo-beta-lactamase superfamily AMBAS45_12705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_12705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_12740 SM00387 Histidine kinase-like ATPases AMBAS45_12745 SM00493 AMBAS45_12745 AMBAS45_12770 SM00382 ATPases associated with a variety of cellular activities AMBAS45_12820 SM00028 Tetratricopeptide repeats AMBAS45_12850 SM00382 ATPases associated with a variety of cellular activities AMBAS45_12850 SM01086 C-terminal, D2-small domain, of ClpB protein AMBAS45_12860 SM00363 S4 RNA-binding domain AMBAS45_12930 SM00861 Transketolase, pyrimidine binding domain AMBAS45_12985 SM00382 ATPases associated with a variety of cellular activities AMBAS45_12995 SM00382 ATPases associated with a variety of cellular activities AMBAS45_13030 SM00358 Double-stranded RNA binding motif AMBAS45_13030 SM00535 Ribonuclease III family AMBAS45_13040 SM00838 Elongation factor G C-terminus AMBAS45_13095 SM00938 Nitrogen regulatory protein P-II AMBAS45_13180 SM00904 Riboflavin kinase AMBAS45_13225 SM00563 Phosphate acyltransferases AMBAS45_13245 SM00411 bacterial (prokaryotic) histone like domain AMBAS45_13250 SM00382 ATPases associated with a variety of cellular activities AMBAS45_13250 SM00464 Found in ATP-dependent protease La (LON) AMBAS45_13255 SM00382 ATPases associated with a variety of cellular activities AMBAS45_13255 SM00994 ClpX C4-type zinc finger AMBAS45_13255 SM01086 C-terminal, D2-small domain, of ClpB protein AMBAS45_13320 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBAS45_13320 SM01240 AMBAS45_13320 AMBAS45_13345 SM00382 ATPases associated with a variety of cellular activities AMBAS45_13350 SM00564 beta-propeller repeat AMBAS45_13355 SM00028 Tetratricopeptide repeats AMBAS45_13370 SM00530 Helix-turn-helix XRE-family like proteins AMBAS45_13375 SM00028 Tetratricopeptide repeats AMBAS45_13375 SM00257 Lysin motif AMBAS45_13385 SM00562 AMBAS45_13385 AMBAS45_13415 SM00382 ATPases associated with a variety of cellular activities AMBAS45_13465 SM00850 LytTr DNA-binding domain AMBAS45_13480 SM01323 AMBAS45_13480 AMBAS45_13545 SM00382 ATPases associated with a variety of cellular activities AMBAS45_13565 SM00098 Alkaline phosphatase homologues AMBAS45_13570 SM00260 Two component signalling adaptor domain AMBAS45_13570 SM00448 cheY-homologous receiver domain AMBAS45_13625 SM00028 Tetratricopeptide repeats AMBAS45_13690 SM00984 UDP binding domain AMBAS45_13790 SM00382 ATPases associated with a variety of cellular activities AMBAS45_13845 SM00052 Putative diguanylate phosphodiesterase AMBAS45_13845 SM00267 diguanylate cyclase AMBAS45_13870 SM00354 helix_turn _helix lactose operon repressor AMBAS45_13900 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMBAS45_13905 SM00460 Transglutaminase/protease-like homologues AMBAS45_13960 SM00267 diguanylate cyclase AMBAS45_13970 SM00422 helix_turn_helix, mercury resistance AMBAS45_14005 SM00267 diguanylate cyclase AMBAS45_14070 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMBAS45_14075 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBAS45_14130 SM00382 ATPases associated with a variety of cellular activities AMBAS45_14160 SM00327 von Willebrand factor (vWF) type A domain AMBAS45_14160 SM00609 Vault protein Inter-alpha-Trypsin domain AMBAS45_14195 SM01322 AMBAS45_14195 AMBAS45_14250 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBAS45_14250 SM01232 AMBAS45_14250 AMBAS45_14265 SM01321 AMBAS45_14265 AMBAS45_14270 SM00487 DEAD-like helicases superfamily AMBAS45_14270 SM00490 helicase superfamily c-terminal domain AMBAS45_14290 SM00387 Histidine kinase-like ATPases AMBAS45_14290 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_14290 SM00448 cheY-homologous receiver domain AMBAS45_14295 SM00267 diguanylate cyclase AMBAS45_14310 SM00387 Histidine kinase-like ATPases AMBAS45_14310 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_14310 SM00448 cheY-homologous receiver domain AMBAS45_14345 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBAS45_14395 SM01081 Putative carbohydrate binding domain AMBAS45_14405 SM00354 helix_turn _helix lactose operon repressor AMBAS45_14450 SM01011 Aminopeptidase P, N-terminal domain AMBAS45_14475 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_14475 SM00387 Histidine kinase-like ATPases AMBAS45_14475 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_14475 SM00448 cheY-homologous receiver domain AMBAS45_14550 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBAS45_14550 SM00895 AMBAS45_14550 AMBAS45_14560 SM00644 AMBAS45_14560 AMBAS45_14610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_14615 SM00448 cheY-homologous receiver domain AMBAS45_14630 SM00073 Histidine Phosphotransfer domain AMBAS45_14630 SM00260 Two component signalling adaptor domain AMBAS45_14630 SM00387 Histidine kinase-like ATPases AMBAS45_14630 SM01231 AMBAS45_14630 AMBAS45_14635 SM00448 cheY-homologous receiver domain AMBAS45_14640 SM00138 Methyltransferase, chemotaxis proteins AMBAS45_14650 SM00448 cheY-homologous receiver domain AMBAS45_14655 SM00260 Two component signalling adaptor domain AMBAS45_14660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_14670 SM00957 SecA DEAD-like domain AMBAS45_14670 SM00958 SecA preprotein cross-linking domain AMBAS45_14685 SM00864 Tubulin/FtsZ family, GTPase domain AMBAS45_14685 SM00865 Tubulin/FtsZ family, C-terminal domain AMBAS45_14690 SM00842 Cell division protein FtsA AMBAS45_14815 SM00028 Tetratricopeptide repeats AMBAS45_14815 SM00267 diguanylate cyclase AMBAS45_14825 SM00382 ATPases associated with a variety of cellular activities AMBAS45_14825 SM00448 cheY-homologous receiver domain AMBAS45_14830 SM00387 Histidine kinase-like ATPases AMBAS45_14870 SM00732 Likely ribonuclease with RNase H fold. AMBAS45_14880 SM00382 ATPases associated with a variety of cellular activities AMBAS45_14915 SM00028 Tetratricopeptide repeats AMBAS45_14970 SM00360 RNA recognition motif AMBAS45_14975 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_15000 SM00878 Biotin carboxylase C-terminal domain AMBAS45_15045 SM00986 Uracil DNA glycosylase superfamily AMBAS45_15045 SM00987 UreE urease accessory protein, C-terminal domain AMBAS45_15075 SM00829 Enoylreductase AMBAS45_15085 SM00421 helix_turn_helix, Lux Regulon AMBAS45_15085 SM00448 cheY-homologous receiver domain AMBAS45_15105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMBAS45_15110 SM00226 Low molecular weight phosphatase family AMBAS45_15125 SM00448 cheY-homologous receiver domain AMBAS45_15135 SM00448 cheY-homologous receiver domain AMBAS45_15135 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_15140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_15140 SM00387 Histidine kinase-like ATPases AMBAS45_15140 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_15180 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_15240 SM00749 bacterial OsmY and nodulation domain AMBAS45_15265 SM00421 helix_turn_helix, Lux Regulon AMBAS45_15265 SM00448 cheY-homologous receiver domain AMBAS45_15285 SM00895 AMBAS45_15285 AMBAS45_15310 SM00267 diguanylate cyclase AMBAS45_15310 SM00448 cheY-homologous receiver domain AMBAS45_15330 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_15330 SM00091 PAS domain AMBAS45_15330 SM00387 Histidine kinase-like ATPases AMBAS45_15330 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_15330 SM00448 cheY-homologous receiver domain AMBAS45_15335 SM00287 Bacterial SH3 domain homologues AMBAS45_15335 SM00644 AMBAS45_15335 AMBAS45_15375 SM00450 Rhodanese Homology Domain AMBAS45_15555 SM00448 cheY-homologous receiver domain AMBAS45_15565 SM01230 AMBAS45_15565 AMBAS45_15575 SM00091 PAS domain AMBAS45_15575 SM00387 Histidine kinase-like ATPases AMBAS45_15575 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_15580 SM00382 ATPases associated with a variety of cellular activities AMBAS45_15580 SM00448 cheY-homologous receiver domain AMBAS45_15585 SM00530 Helix-turn-helix XRE-family like proteins AMBAS45_15600 SM00073 Histidine Phosphotransfer domain AMBAS45_15605 SM00563 Phosphate acyltransferases AMBAS45_15625 SM00244 prohibitin homologues AMBAS45_15635 SM00387 Histidine kinase-like ATPases AMBAS45_15635 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_15635 SM00448 cheY-homologous receiver domain AMBAS45_15635 SM01358 AMBAS45_15635 AMBAS45_15745 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_15745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_15745 SM00091 PAS domain AMBAS45_15745 SM00387 Histidine kinase-like ATPases AMBAS45_15745 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_15745 SM00448 cheY-homologous receiver domain AMBAS45_15760 SM00886 Stress responsive A/B Barrel Domain AMBAS45_15840 SM00354 helix_turn _helix lactose operon repressor AMBAS45_15885 SM00996 S-adenosyl-L-homocysteine hydrolase AMBAS45_15885 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMBAS45_15890 SM00267 diguanylate cyclase AMBAS45_15905 SM00564 beta-propeller repeat AMBAS45_15910 SM00062 Bacterial periplasmic substrate-binding proteins AMBAS45_15925 SM00382 ATPases associated with a variety of cellular activities AMBAS45_15955 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBAS45_15980 SM00421 helix_turn_helix, Lux Regulon AMBAS45_15980 SM00448 cheY-homologous receiver domain AMBAS45_15985 SM00091 PAS domain AMBAS45_15985 SM00387 Histidine kinase-like ATPases AMBAS45_15985 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_15985 SM00448 cheY-homologous receiver domain AMBAS45_15990 SM00897 FIST N domain AMBAS45_15990 SM01204 AMBAS45_15990 AMBAS45_15995 SM00900 AMBAS45_15995 AMBAS45_16005 SM00421 helix_turn_helix, Lux Regulon AMBAS45_16005 SM00448 cheY-homologous receiver domain AMBAS45_16015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_16015 SM00091 PAS domain AMBAS45_16015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_16050 SM00965 Secretin and TonB N terminus short domain AMBAS45_16075 SM00421 helix_turn_helix, Lux Regulon AMBAS45_16105 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMBAS45_16110 SM00421 helix_turn_helix, Lux Regulon AMBAS45_16110 SM00448 cheY-homologous receiver domain AMBAS45_16115 SM00387 Histidine kinase-like ATPases AMBAS45_16125 SM00487 DEAD-like helicases superfamily AMBAS45_16125 SM00490 helicase superfamily c-terminal domain AMBAS45_16130 SM00052 Putative diguanylate phosphodiesterase AMBAS45_16130 SM00267 diguanylate cyclase AMBAS45_16130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_16170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_16170 SM00091 PAS domain AMBAS45_16170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_16175 SM00155 Phospholipase D. Active site motifs. AMBAS45_16205 SM00448 cheY-homologous receiver domain AMBAS45_16215 SM00387 Histidine kinase-like ATPases AMBAS45_16220 SM00849 Metallo-beta-lactamase superfamily AMBAS45_16225 SM00486 DNA polymerase type-B family AMBAS45_16240 SM00360 RNA recognition motif AMBAS45_16275 SM00986 Uracil DNA glycosylase superfamily AMBAS45_16275 SM00987 UreE urease accessory protein, C-terminal domain AMBAS45_16280 SM00052 Putative diguanylate phosphodiesterase AMBAS45_16280 SM00267 diguanylate cyclase AMBAS45_16280 SM00448 cheY-homologous receiver domain AMBAS45_16350 SM00465 GIY-YIG type nucleases (URI domain) AMBAS45_16460 SM00173 Ras subfamily of RAS small GTPases AMBAS45_16460 SM00175 Rab subfamily of small GTPases AMBAS45_16465 SM00052 Putative diguanylate phosphodiesterase AMBAS45_16465 SM00267 diguanylate cyclase AMBAS45_16475 SM00563 Phosphate acyltransferases AMBAS45_16480 SM00563 Phosphate acyltransferases AMBAS45_16610 SM00052 Putative diguanylate phosphodiesterase AMBAS45_16610 SM00267 diguanylate cyclase AMBAS45_16630 SM00849 Metallo-beta-lactamase superfamily AMBAS45_16675 SM00530 Helix-turn-helix XRE-family like proteins AMBAS45_16680 SM00100 Cyclic nucleotide-monophosphate binding domain AMBAS45_16705 SM00354 helix_turn _helix lactose operon repressor AMBAS45_16710 SM00849 Metallo-beta-lactamase superfamily AMBAS45_16750 SM00900 AMBAS45_16750 AMBAS45_16825 SM00028 Tetratricopeptide repeats AMBAS45_16830 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMBAS45_16840 SM00267 diguanylate cyclase AMBAS45_16840 SM00448 cheY-homologous receiver domain AMBAS45_16845 SM00479 AMBAS45_16845 AMBAS45_16850 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBAS45_16865 SM00387 Histidine kinase-like ATPases AMBAS45_16865 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_16865 SM00448 cheY-homologous receiver domain AMBAS45_16895 SM00421 helix_turn_helix, Lux Regulon AMBAS45_16895 SM00448 cheY-homologous receiver domain AMBAS45_16920 SM01358 AMBAS45_16920 AMBAS45_16935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_16935 SM00240 Forkhead associated domain AMBAS45_16940 SM00028 Tetratricopeptide repeats AMBAS45_16940 SM00220 Serine/Threonine protein kinases, catalytic domain AMBAS45_16945 SM00387 Histidine kinase-like ATPases AMBAS45_16950 SM00448 cheY-homologous receiver domain AMBAS45_16975 SM00248 ankyrin repeats AMBAS45_16980 SM01060 AMBAS45_16980 AMBAS45_16990 SM00052 Putative diguanylate phosphodiesterase AMBAS45_16990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_16990 SM00091 PAS domain AMBAS45_16990 SM00267 diguanylate cyclase AMBAS45_17020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_17060 SM00984 UDP binding domain AMBAS45_17180 SM00662 RNA polymerases D AMBAS45_17185 SM00363 S4 RNA-binding domain AMBAS45_17185 SM01390 AMBAS45_17185 AMBAS45_17250 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMBAS45_17255 SM01374 AMBAS45_17255 AMBAS45_17260 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_17260 SM00387 Histidine kinase-like ATPases AMBAS45_17260 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_17260 SM00448 cheY-homologous receiver domain AMBAS45_17290 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMBAS45_17295 SM00316 Ribosomal protein S1-like RNA-binding domain AMBAS45_17295 SM00357 Cold shock protein domain AMBAS45_17295 SM00955 AMBAS45_17295 AMBAS45_17330 SM00671 Sel1-like repeats. AMBAS45_17360 SM00062 Bacterial periplasmic substrate-binding proteins AMBAS45_17365 SM00387 Histidine kinase-like ATPases AMBAS45_17365 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_17365 SM00448 cheY-homologous receiver domain AMBAS45_17400 SM00344 helix_turn_helix ASNC type AMBAS45_17410 SM00357 Cold shock protein domain AMBAS45_17440 SM00448 cheY-homologous receiver domain AMBAS45_17450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_17450 SM00387 Histidine kinase-like ATPases AMBAS45_17450 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_17455 SM00448 cheY-homologous receiver domain AMBAS45_17465 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMBAS45_17535 SM00382 ATPases associated with a variety of cellular activities AMBAS45_17540 SM00421 helix_turn_helix, Lux Regulon AMBAS45_17560 SM00530 Helix-turn-helix XRE-family like proteins AMBAS45_17565 SM00382 ATPases associated with a variety of cellular activities AMBAS45_17565 SM01086 C-terminal, D2-small domain, of ClpB protein AMBAS45_17575 SM00357 Cold shock protein domain AMBAS45_17590 SM00487 DEAD-like helicases superfamily AMBAS45_17590 SM00490 helicase superfamily c-terminal domain AMBAS45_17610 SM00919 Malic enzyme, NAD binding domain AMBAS45_17610 SM01274 AMBAS45_17610 AMBAS45_17660 SM00052 Putative diguanylate phosphodiesterase AMBAS45_17675 SM00382 ATPases associated with a variety of cellular activities AMBAS45_17680 SM00382 ATPases associated with a variety of cellular activities AMBAS45_17680 SM00962 SRP54-type protein, GTPase domain AMBAS45_17680 SM00963 SRP54-type protein, helical bundle domain AMBAS45_17750 SM00052 Putative diguanylate phosphodiesterase AMBAS45_17765 SM00382 ATPases associated with a variety of cellular activities AMBAS45_17770 SM00448 cheY-homologous receiver domain AMBAS45_17770 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_17775 SM00387 Histidine kinase-like ATPases AMBAS45_17775 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_17795 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBAS45_17845 SM00028 Tetratricopeptide repeats AMBAS45_17885 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBAS45_17915 SM00838 Elongation factor G C-terminus AMBAS45_17915 SM00889 Elongation factor G, domain IV AMBAS45_17930 SM00663 RNA polymerase I subunit A N-terminus AMBAS45_17955 SM00649 Ribosomal protein L11/L12 AMBAS45_17960 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMBAS45_17960 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMBAS45_17970 SM00382 ATPases associated with a variety of cellular activities AMBAS45_17995 SM00487 DEAD-like helicases superfamily AMBAS45_17995 SM00490 helicase superfamily c-terminal domain AMBAS45_18035 SM00642 Alpha-amylase domain AMBAS45_18080 SM00487 DEAD-like helicases superfamily AMBAS45_18080 SM00490 helicase superfamily c-terminal domain AMBAS45_18100 SM00849 Metallo-beta-lactamase superfamily AMBAS45_18110 SM00841 Elongation factor P, C-terminal AMBAS45_18110 SM01185 AMBAS45_18110 AMBAS45_18205 SM00244 prohibitin homologues AMBAS45_18210 SM00244 prohibitin homologues AMBAS45_18230 SM01340 AMBAS45_18230 AMBAS45_18235 SM00257 Lysin motif AMBAS45_18235 SM00646 AMBAS45_18235 AMBAS45_18295 SM00382 ATPases associated with a variety of cellular activities AMBAS45_18335 SM00849 Metallo-beta-lactamase superfamily AMBAS45_18340 SM00448 cheY-homologous receiver domain AMBAS45_18340 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_18345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_18345 SM00387 Histidine kinase-like ATPases AMBAS45_18345 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_18390 SM00382 ATPases associated with a variety of cellular activities AMBAS45_18400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_18405 SM00387 Histidine kinase-like ATPases AMBAS45_18410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBAS45_18440 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBAS45_18440 SM00866 AMBAS45_18440 AMBAS45_18480 SM00267 diguanylate cyclase AMBAS45_18505 SM00354 helix_turn _helix lactose operon repressor AMBAS45_18515 SM00382 ATPases associated with a variety of cellular activities AMBAS45_18520 SM00382 ATPases associated with a variety of cellular activities AMBAS45_18545 SM00382 ATPases associated with a variety of cellular activities AMBAS45_18700 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBAS45_18715 SM00867 YceI-like domain AMBAS45_18750 SM00829 Enoylreductase AMBAS45_18755 SM00267 diguanylate cyclase AMBAS45_18760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_18760 SM00387 Histidine kinase-like ATPases AMBAS45_18760 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_18760 SM00448 cheY-homologous receiver domain AMBAS45_18780 SM00420 helix_turn_helix, Deoxyribose operon repressor AMBAS45_18780 SM01134 AMBAS45_18780 AMBAS45_18795 SM00267 diguanylate cyclase AMBAS45_18810 SM00342 helix_turn_helix, arabinose operon control protein AMBAS45_18810 SM01009 AlkA N-terminal domain AMBAS45_18840 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMBAS45_18840 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMBAS45_18890 SM00965 Secretin and TonB N terminus short domain AMBAS45_18950 SM00346 helix_turn_helix isocitrate lyase regulation AMBAS45_18975 SM00883 Chaperonin 10 Kd subunit AMBAS45_19010 SM00878 Biotin carboxylase C-terminal domain AMBAS45_19040 SM00479 AMBAS45_19040 AMBAS45_19040 SM00990 AMBAS45_19040 AMBAS45_19070 SM00062 Bacterial periplasmic substrate-binding proteins AMBAS45_19090 SM00798 AICARFT/IMPCHase bienzyme AMBAS45_19090 SM00851 MGS-like domain AMBAS45_19100 SM01209 AMBAS45_19100 AMBAS45_19100 SM01210 AMBAS45_19100 AMBAS45_19125 SM00448 cheY-homologous receiver domain AMBAS45_19125 SM00862 Transcriptional regulatory protein, C terminal AMBAS45_19130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBAS45_19130 SM00387 Histidine kinase-like ATPases AMBAS45_19130 SM00388 His Kinase A (phosphoacceptor) domain AMBAS45_19160 SM00363 S4 RNA-binding domain AMBAS45_19175 SM00382 ATPases associated with a variety of cellular activities AMBAS45_19230 SM00849 Metallo-beta-lactamase superfamily AMBAS45_19260 SM00867 YceI-like domain AMBAS45_19305 SM00382 ATPases associated with a variety of cellular activities AMBAS45_19330 SM00320 WD40 repeats AMBAS45_19350 SM00316 Ribosomal protein S1-like RNA-binding domain AMBAS45_19350 SM00732 Likely ribonuclease with RNase H fold. AMBAS45_19380 SM00631 AMBAS45_19380 AMBAS45_19480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBAS45_19480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBAS45_19480 SM00091 PAS domain AMBAS45_19480 SM00267 diguanylate cyclase AMBAS45_19485 SM00563 Phosphate acyltransferases AMBAS45_19505 SM00382 ATPases associated with a variety of cellular activities AMBAS45_19570 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMBAS45_19675 SM00530 Helix-turn-helix XRE-family like proteins AMBAS45_19690 SM00487 DEAD-like helicases superfamily AMBAS45_20096 SM00530 Helix-turn-helix XRE-family like proteins