AMBLS11_00005 SM00382 ATPases associated with a variety of cellular activities AMBLS11_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AMBLS11_00010 SM00480 DNA polymerase III beta subunit AMBLS11_00020 SM00387 Histidine kinase-like ATPases AMBLS11_00020 SM00433 TopoisomeraseII AMBLS11_00030 SM00836 DALR anticodon binding domain AMBLS11_00070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMBLS11_00070 SM00474 3'-5' exonuclease AMBLS11_00070 SM00475 5'-3' exonuclease AMBLS11_00070 SM00482 DNA polymerase A domain AMBLS11_00115 SM00257 Lysin motif AMBLS11_00180 SM00481 DNA polymerase alpha chain like domain AMBLS11_00265 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBLS11_00265 SM01232 AMBLS11_00265 AMBLS11_00290 SM00052 Putative diguanylate phosphodiesterase AMBLS11_00290 SM00267 diguanylate cyclase AMBLS11_00300 SM00829 Enoylreductase AMBLS11_00305 SM00450 Rhodanese Homology Domain AMBLS11_00340 SM00052 Putative diguanylate phosphodiesterase AMBLS11_00340 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_00340 SM00267 diguanylate cyclase AMBLS11_00400 SM00490 helicase superfamily c-terminal domain AMBLS11_00405 SM00487 DEAD-like helicases superfamily AMBLS11_00420 SM00382 ATPases associated with a variety of cellular activities AMBLS11_00450 SM00849 Metallo-beta-lactamase superfamily AMBLS11_00470 SM00876 Biotin and Thiamin Synthesis associated domain AMBLS11_00520 SM00267 diguanylate cyclase AMBLS11_00530 SM00072 Guanylate kinase homologues. AMBLS11_00535 SM01409 AMBLS11_00535 AMBLS11_00540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_00540 SM00954 Region found in RelA / SpoT proteins AMBLS11_00555 SM00487 DEAD-like helicases superfamily AMBLS11_00555 SM00490 helicase superfamily c-terminal domain AMBLS11_00585 SM00382 ATPases associated with a variety of cellular activities AMBLS11_00590 SM00052 Putative diguanylate phosphodiesterase AMBLS11_00590 SM00267 diguanylate cyclase AMBLS11_00625 SM00052 Putative diguanylate phosphodiesterase AMBLS11_00625 SM01034 Sensors of blue-light using FAD AMBLS11_00630 SM00267 diguanylate cyclase AMBLS11_00695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_00715 SM00052 Putative diguanylate phosphodiesterase AMBLS11_00715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_00715 SM00267 diguanylate cyclase AMBLS11_00735 SM00341 Helicase and RNase D C-terminal AMBLS11_00735 SM00487 DEAD-like helicases superfamily AMBLS11_00735 SM00490 helicase superfamily c-terminal domain AMBLS11_00735 SM00956 AMBLS11_00735 AMBLS11_00745 SM00924 MgtE intracellular N domain AMBLS11_00755 SM00267 diguanylate cyclase AMBLS11_00755 SM00448 cheY-homologous receiver domain AMBLS11_00765 SM00971 Serine acetyltransferase, N-terminal AMBLS11_00770 SM00267 diguanylate cyclase AMBLS11_00810 SM00014 Acid phosphatase homologues AMBLS11_00855 SM01130 AMBLS11_00855 AMBLS11_00860 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_00870 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_00915 SM00354 helix_turn _helix lactose operon repressor AMBLS11_00975 SM00420 helix_turn_helix, Deoxyribose operon repressor AMBLS11_00975 SM01134 AMBLS11_00975 AMBLS11_01020 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_01055 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_01060 SM01038 Beta galactosidase small chain AMBLS11_01065 SM00448 cheY-homologous receiver domain AMBLS11_01065 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_01070 SM00387 Histidine kinase-like ATPases AMBLS11_01095 SM00478 endonuclease III AMBLS11_01095 SM00525 AMBLS11_01095 AMBLS11_01125 SM00857 Resolvase, N terminal domain AMBLS11_01200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_01200 SM00387 Histidine kinase-like ATPases AMBLS11_01200 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_01205 SM00448 cheY-homologous receiver domain AMBLS11_01205 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_01345 SM00422 helix_turn_helix, mercury resistance AMBLS11_01495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_01500 SM00448 cheY-homologous receiver domain AMBLS11_01505 SM00073 Histidine Phosphotransfer domain AMBLS11_01505 SM00260 Two component signalling adaptor domain AMBLS11_01505 SM00387 Histidine kinase-like ATPases AMBLS11_01505 SM01231 AMBLS11_01505 AMBLS11_01510 SM00260 Two component signalling adaptor domain AMBLS11_01515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_01515 SM00091 PAS domain AMBLS11_01515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_01520 SM00138 Methyltransferase, chemotaxis proteins AMBLS11_01530 SM00448 cheY-homologous receiver domain AMBLS11_01535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_01540 SM00448 cheY-homologous receiver domain AMBLS11_01545 SM00073 Histidine Phosphotransfer domain AMBLS11_01545 SM00260 Two component signalling adaptor domain AMBLS11_01545 SM00387 Histidine kinase-like ATPases AMBLS11_01545 SM01231 AMBLS11_01545 AMBLS11_01550 SM00260 Two component signalling adaptor domain AMBLS11_01555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_01555 SM00091 PAS domain AMBLS11_01555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_01555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_01560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_01560 SM00091 PAS domain AMBLS11_01560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_01565 SM00138 Methyltransferase, chemotaxis proteins AMBLS11_01575 SM00448 cheY-homologous receiver domain AMBLS11_01595 SM00354 helix_turn _helix lactose operon repressor AMBLS11_01610 SM00267 diguanylate cyclase AMBLS11_01630 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_01630 SM00387 Histidine kinase-like ATPases AMBLS11_01630 SM00448 cheY-homologous receiver domain AMBLS11_01645 SM00354 helix_turn _helix lactose operon repressor AMBLS11_01695 SM00855 Phosphoglycerate mutase family AMBLS11_01710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_01710 SM00382 ATPases associated with a variety of cellular activities AMBLS11_01715 SM01403 AMBLS11_01715 AMBLS11_01735 SM01382 AMBLS11_01735 AMBLS11_01735 SM01383 AMBLS11_01735 AMBLS11_01750 SM00322 K homology RNA-binding domain AMBLS11_01795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_01795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_01825 SM00487 DEAD-like helicases superfamily AMBLS11_01825 SM00490 helicase superfamily c-terminal domain AMBLS11_01860 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_01870 SM00938 Nitrogen regulatory protein P-II AMBLS11_01920 SM00073 Histidine Phosphotransfer domain AMBLS11_01920 SM00387 Histidine kinase-like ATPases AMBLS11_01920 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_01920 SM00448 cheY-homologous receiver domain AMBLS11_01925 SM00434 DNA Topoisomerase IV AMBLS11_01935 SM00052 Putative diguanylate phosphodiesterase AMBLS11_01935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_01935 SM00267 diguanylate cyclase AMBLS11_01940 SM01150 AMBLS11_01940 AMBLS11_02015 SM00965 Secretin and TonB N terminus short domain AMBLS11_02045 SM00919 Malic enzyme, NAD binding domain AMBLS11_02045 SM01274 AMBLS11_02045 AMBLS11_02065 SM01060 AMBLS11_02065 AMBLS11_02080 SM00052 Putative diguanylate phosphodiesterase AMBLS11_02110 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMBLS11_02115 SM00851 MGS-like domain AMBLS11_02125 SM00448 cheY-homologous receiver domain AMBLS11_02125 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_02130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_02130 SM00387 Histidine kinase-like ATPases AMBLS11_02130 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_02150 SM00382 ATPases associated with a variety of cellular activities AMBLS11_02175 SM00450 Rhodanese Homology Domain AMBLS11_02215 SM00479 AMBLS11_02215 AMBLS11_02245 SM00028 Tetratricopeptide repeats AMBLS11_02300 SM00267 diguanylate cyclase AMBLS11_02305 SM01004 Delta-aminolevulinic acid dehydratase AMBLS11_02315 SM00487 DEAD-like helicases superfamily AMBLS11_02315 SM00490 helicase superfamily c-terminal domain AMBLS11_02325 SM00357 Cold shock protein domain AMBLS11_02325 SM00382 ATPases associated with a variety of cellular activities AMBLS11_02325 SM00959 Rho termination factor, N-terminal domain AMBLS11_02335 SM00387 Histidine kinase-like ATPases AMBLS11_02335 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_02335 SM00448 cheY-homologous receiver domain AMBLS11_02345 SM01001 AIR carboxylase AMBLS11_02400 SM00788 Adenylosuccinate synthetase AMBLS11_02455 SM01005 Alanine racemase, C-terminal domain AMBLS11_02480 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_02640 SM00257 Lysin motif AMBLS11_02680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_02680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_02680 SM01049 AMBLS11_02680 AMBLS11_02690 SM00287 Bacterial SH3 domain homologues AMBLS11_02695 SM01118 AMBLS11_02695 AMBLS11_02705 SM00927 DNA mismatch repair enzyme MutH AMBLS11_02715 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_02735 SM00448 cheY-homologous receiver domain AMBLS11_02740 SM00267 diguanylate cyclase AMBLS11_02745 SM00387 Histidine kinase-like ATPases AMBLS11_02745 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_02745 SM00448 cheY-homologous receiver domain AMBLS11_02770 SM00487 DEAD-like helicases superfamily AMBLS11_02770 SM00490 helicase superfamily c-terminal domain AMBLS11_02775 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_02790 SM00670 Large family of predicted nucleotide-binding domains AMBLS11_02805 SM00487 DEAD-like helicases superfamily AMBLS11_02805 SM00490 helicase superfamily c-terminal domain AMBLS11_02810 SM00028 Tetratricopeptide repeats AMBLS11_02850 SM00387 Histidine kinase-like ATPases AMBLS11_02850 SM00433 TopoisomeraseII AMBLS11_02885 SM00841 Elongation factor P, C-terminal AMBLS11_02885 SM01185 AMBLS11_02885 AMBLS11_02945 SM01012 AMBLS11_02945 AMBLS11_02995 SM00267 diguanylate cyclase AMBLS11_03000 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_03000 SM00091 PAS domain AMBLS11_03000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_03015 SM00382 ATPases associated with a variety of cellular activities AMBLS11_03075 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMBLS11_03080 SM01007 Class II Aldolase and Adducin N-terminal domain AMBLS11_03115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_03115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_03125 SM00400 zinc finger AMBLS11_03125 SM00493 AMBLS11_03125 AMBLS11_03125 SM00766 DNA primase DnaG DnaB-binding AMBLS11_03150 SM01207 AMBLS11_03150 AMBLS11_03155 SM00905 Dihydroneopterin aldolase AMBLS11_03190 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_03200 SM00387 Histidine kinase-like ATPases AMBLS11_03205 SM00448 cheY-homologous receiver domain AMBLS11_03205 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_03210 SM00387 Histidine kinase-like ATPases AMBLS11_03210 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_03220 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_03225 SM00710 Parallel beta-helix repeats AMBLS11_03260 SM00028 Tetratricopeptide repeats AMBLS11_03265 SM00448 cheY-homologous receiver domain AMBLS11_03265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_03270 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_03270 SM00091 PAS domain AMBLS11_03270 SM00387 Histidine kinase-like ATPases AMBLS11_03270 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_03270 SM00448 cheY-homologous receiver domain AMBLS11_03275 SM00897 FIST N domain AMBLS11_03275 SM01204 AMBLS11_03275 AMBLS11_03305 SM00387 Histidine kinase-like ATPases AMBLS11_03305 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_03305 SM00448 cheY-homologous receiver domain AMBLS11_03310 SM00028 Tetratricopeptide repeats AMBLS11_03340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_03340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_03355 SM00650 Ribosomal RNA adenine dimethylases AMBLS11_03375 SM00271 DnaJ molecular chaperone homology domain AMBLS11_03420 SM00954 Region found in RelA / SpoT proteins AMBLS11_03450 SM00822 AMBLS11_03450 AMBLS11_03455 SM01236 AMBLS11_03455 AMBLS11_03500 SM00387 Histidine kinase-like ATPases AMBLS11_03500 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_03505 SM00448 cheY-homologous receiver domain AMBLS11_03505 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_03560 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_03565 SM00924 MgtE intracellular N domain AMBLS11_03595 SM00382 ATPases associated with a variety of cellular activities AMBLS11_03625 SM00382 ATPases associated with a variety of cellular activities AMBLS11_03660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_03665 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_03700 SM00460 Transglutaminase/protease-like homologues AMBLS11_03710 SM00460 Transglutaminase/protease-like homologues AMBLS11_03745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_03745 SM00091 PAS domain AMBLS11_03745 SM00387 Histidine kinase-like ATPases AMBLS11_03745 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_03745 SM00448 cheY-homologous receiver domain AMBLS11_03770 SM00861 Transketolase, pyrimidine binding domain AMBLS11_03775 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBLS11_03800 SM00448 cheY-homologous receiver domain AMBLS11_03800 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_03805 SM00387 Histidine kinase-like ATPases AMBLS11_03805 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_03865 SM00382 ATPases associated with a variety of cellular activities AMBLS11_03915 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBLS11_03925 SM01263 AMBLS11_03925 AMBLS11_03940 SM00448 cheY-homologous receiver domain AMBLS11_03940 SM00850 LytTr DNA-binding domain AMBLS11_03955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_03995 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBLS11_03995 SM00866 AMBLS11_03995 AMBLS11_04030 SM00382 ATPases associated with a variety of cellular activities AMBLS11_04060 SM00656 AMBLS11_04060 AMBLS11_04060 SM00710 Parallel beta-helix repeats AMBLS11_04070 SM00387 Histidine kinase-like ATPases AMBLS11_04070 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_04075 SM00382 ATPases associated with a variety of cellular activities AMBLS11_04075 SM00448 cheY-homologous receiver domain AMBLS11_04100 SM00919 Malic enzyme, NAD binding domain AMBLS11_04100 SM01274 AMBLS11_04100 AMBLS11_04110 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMBLS11_04140 SM00850 LytTr DNA-binding domain AMBLS11_04155 SM00448 cheY-homologous receiver domain AMBLS11_04160 SM00091 PAS domain AMBLS11_04180 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_04190 SM00487 DEAD-like helicases superfamily AMBLS11_04190 SM00490 helicase superfamily c-terminal domain AMBLS11_04195 SM00320 WD40 repeats AMBLS11_04205 SM00382 ATPases associated with a variety of cellular activities AMBLS11_04225 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_04240 SM01329 AMBLS11_04240 AMBLS11_04245 SM00917 LeuA allosteric (dimerisation) domain AMBLS11_04255 SM01192 AMBLS11_04255 AMBLS11_04255 SM01193 AMBLS11_04255 AMBLS11_04265 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMBLS11_04265 SM00534 ATPase domain of DNA mismatch repair MUTS family AMBLS11_04275 SM00382 ATPases associated with a variety of cellular activities AMBLS11_04285 SM00382 ATPases associated with a variety of cellular activities AMBLS11_04295 SM00387 Histidine kinase-like ATPases AMBLS11_04295 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_04300 SM00448 cheY-homologous receiver domain AMBLS11_04300 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_04340 SM00382 ATPases associated with a variety of cellular activities AMBLS11_04410 SM00382 ATPases associated with a variety of cellular activities AMBLS11_04450 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBLS11_04455 SM01329 AMBLS11_04455 AMBLS11_04475 SM00267 diguanylate cyclase AMBLS11_04545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_04590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_04600 SM00935 Outer membrane protein (OmpH-like) AMBLS11_04625 SM00481 DNA polymerase alpha chain like domain AMBLS11_04640 SM00267 diguanylate cyclase AMBLS11_04665 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_04670 SM01211 AMBLS11_04670 AMBLS11_04705 SM00858 AMBLS11_04705 AMBLS11_04710 SM00260 Two component signalling adaptor domain AMBLS11_04710 SM00448 cheY-homologous receiver domain AMBLS11_04715 SM00138 Methyltransferase, chemotaxis proteins AMBLS11_04760 SM00047 Lysozyme subfamily 2 AMBLS11_04860 SM00858 AMBLS11_04860 AMBLS11_04910 SM00858 AMBLS11_04910 AMBLS11_04935 SM00382 ATPases associated with a variety of cellular activities AMBLS11_04940 SM00387 Histidine kinase-like ATPases AMBLS11_04940 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_04945 SM00382 ATPases associated with a variety of cellular activities AMBLS11_04945 SM00448 cheY-homologous receiver domain AMBLS11_04970 SM00382 ATPases associated with a variety of cellular activities AMBLS11_05040 SM00382 ATPases associated with a variety of cellular activities AMBLS11_05040 SM00962 SRP54-type protein, GTPase domain AMBLS11_05055 SM00448 cheY-homologous receiver domain AMBLS11_05065 SM00073 Histidine Phosphotransfer domain AMBLS11_05065 SM00260 Two component signalling adaptor domain AMBLS11_05065 SM00387 Histidine kinase-like ATPases AMBLS11_05065 SM01231 AMBLS11_05065 AMBLS11_05070 SM00448 cheY-homologous receiver domain AMBLS11_05080 SM00260 Two component signalling adaptor domain AMBLS11_05085 SM00260 Two component signalling adaptor domain AMBLS11_05105 SM01018 B12 binding domain AMBLS11_05120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_05120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_05135 SM00947 Carbonic anhydrase AMBLS11_05170 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMBLS11_05200 SM00382 ATPases associated with a variety of cellular activities AMBLS11_05205 SM00382 ATPases associated with a variety of cellular activities AMBLS11_05225 SM00382 ATPases associated with a variety of cellular activities AMBLS11_05250 SM00091 PAS domain AMBLS11_05250 SM00382 ATPases associated with a variety of cellular activities AMBLS11_05265 SM00344 helix_turn_helix ASNC type AMBLS11_05270 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBLS11_05295 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_05310 SM00028 Tetratricopeptide repeats AMBLS11_05310 SM00386 HAT (Half-A-TPR) repeats AMBLS11_05345 SM00028 Tetratricopeptide repeats AMBLS11_05415 SM00829 Enoylreductase AMBLS11_05430 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBLS11_05445 SM00836 DALR anticodon binding domain AMBLS11_05445 SM01016 Arginyl tRNA synthetase N terminal dom AMBLS11_05460 SM00052 Putative diguanylate phosphodiesterase AMBLS11_05460 SM00267 diguanylate cyclase AMBLS11_05480 SM00267 diguanylate cyclase AMBLS11_05515 SM01321 AMBLS11_05515 AMBLS11_05525 SM00937 AMBLS11_05525 AMBLS11_05580 SM00463 Small MutS-related domain AMBLS11_05610 SM00763 PrkA AAA domain AMBLS11_05640 SM00965 Secretin and TonB N terminus short domain AMBLS11_05655 SM00479 AMBLS11_05655 AMBLS11_05680 SM00357 Cold shock protein domain AMBLS11_05695 SM00478 endonuclease III AMBLS11_05705 SM00900 AMBLS11_05705 AMBLS11_05735 SM00487 DEAD-like helicases superfamily AMBLS11_05735 SM00490 helicase superfamily c-terminal domain AMBLS11_05810 SM00267 diguanylate cyclase AMBLS11_05835 SM00028 Tetratricopeptide repeats AMBLS11_05840 SM00327 von Willebrand factor (vWF) type A domain AMBLS11_05875 SM00052 Putative diguanylate phosphodiesterase AMBLS11_05875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_05875 SM00267 diguanylate cyclase AMBLS11_05885 SM00855 Phosphoglycerate mutase family AMBLS11_05895 SM01091 Transporter associated domain AMBLS11_05905 SM00382 ATPases associated with a variety of cellular activities AMBLS11_05905 SM00962 SRP54-type protein, GTPase domain AMBLS11_05905 SM00963 SRP54-type protein, helical bundle domain AMBLS11_05950 SM00382 ATPases associated with a variety of cellular activities AMBLS11_06005 SM00830 Chorismate mutase type II AMBLS11_06040 SM00830 Chorismate mutase type II AMBLS11_06045 SM00448 cheY-homologous receiver domain AMBLS11_06060 SM00331 Sigma factor PP2C-like phosphatases AMBLS11_06060 SM00448 cheY-homologous receiver domain AMBLS11_06070 SM00052 Putative diguanylate phosphodiesterase AMBLS11_06070 SM00267 diguanylate cyclase AMBLS11_06080 SM00387 Histidine kinase-like ATPases AMBLS11_06080 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_06090 SM00382 ATPases associated with a variety of cellular activities AMBLS11_06090 SM00448 cheY-homologous receiver domain AMBLS11_06095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_06120 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBLS11_06125 SM00382 ATPases associated with a variety of cellular activities AMBLS11_06200 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMBLS11_06210 SM00267 diguanylate cyclase AMBLS11_06230 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_06270 SM00267 diguanylate cyclase AMBLS11_06335 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_06335 SM00876 Biotin and Thiamin Synthesis associated domain AMBLS11_06360 SM00226 Low molecular weight phosphatase family AMBLS11_06370 SM00382 ATPases associated with a variety of cellular activities AMBLS11_06380 SM00387 Histidine kinase-like ATPases AMBLS11_06380 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_06385 SM00448 cheY-homologous receiver domain AMBLS11_06385 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_06410 SM00382 ATPases associated with a variety of cellular activities AMBLS11_06415 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_06425 SM00028 Tetratricopeptide repeats AMBLS11_06425 SM00448 cheY-homologous receiver domain AMBLS11_06455 SM01321 AMBLS11_06455 AMBLS11_06465 SM00382 ATPases associated with a variety of cellular activities AMBLS11_06480 SM00905 Dihydroneopterin aldolase AMBLS11_06490 SM00387 Histidine kinase-like ATPases AMBLS11_06495 SM00448 cheY-homologous receiver domain AMBLS11_06495 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_06565 SM00363 S4 RNA-binding domain AMBLS11_06575 SM01266 AMBLS11_06575 AMBLS11_06650 SM00421 helix_turn_helix, Lux Regulon AMBLS11_06650 SM00448 cheY-homologous receiver domain AMBLS11_06660 SM00387 Histidine kinase-like ATPases AMBLS11_06660 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_06660 SM00448 cheY-homologous receiver domain AMBLS11_06675 SM00271 DnaJ molecular chaperone homology domain AMBLS11_06685 SM00052 Putative diguanylate phosphodiesterase AMBLS11_06685 SM00091 PAS domain AMBLS11_06705 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMBLS11_06710 SM00851 MGS-like domain AMBLS11_06710 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMBLS11_06760 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_06760 SM01091 Transporter associated domain AMBLS11_06775 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_06825 SM00903 Flavin reductase like domain AMBLS11_06865 SM00829 Enoylreductase AMBLS11_06880 SM01400 AMBLS11_06880 AMBLS11_06900 SM00937 AMBLS11_06900 AMBLS11_06910 SM00448 cheY-homologous receiver domain AMBLS11_06950 SM00838 Elongation factor G C-terminus AMBLS11_06950 SM00889 Elongation factor G, domain IV AMBLS11_06955 SM01116 AMBLS11_06955 AMBLS11_06960 SM00219 Tyrosine kinase, catalytic domain AMBLS11_06960 SM00331 Sigma factor PP2C-like phosphatases AMBLS11_06960 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMBLS11_06970 SM00460 Transglutaminase/protease-like homologues AMBLS11_07005 SM00052 Putative diguanylate phosphodiesterase AMBLS11_07005 SM00267 diguanylate cyclase AMBLS11_07080 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBLS11_07090 SM00052 Putative diguanylate phosphodiesterase AMBLS11_07090 SM00091 PAS domain AMBLS11_07090 SM00267 diguanylate cyclase AMBLS11_07095 SM00052 Putative diguanylate phosphodiesterase AMBLS11_07095 SM00267 diguanylate cyclase AMBLS11_07135 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_07135 SM00091 PAS domain AMBLS11_07135 SM00267 diguanylate cyclase AMBLS11_07165 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBLS11_07170 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMBLS11_07205 SM00052 Putative diguanylate phosphodiesterase AMBLS11_07205 SM00091 PAS domain AMBLS11_07205 SM00267 diguanylate cyclase AMBLS11_07205 SM00448 cheY-homologous receiver domain AMBLS11_07210 SM00267 diguanylate cyclase AMBLS11_07210 SM00448 cheY-homologous receiver domain AMBLS11_07215 SM00387 Histidine kinase-like ATPases AMBLS11_07215 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_07215 SM00448 cheY-homologous receiver domain AMBLS11_07310 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMBLS11_07380 SM00052 Putative diguanylate phosphodiesterase AMBLS11_07380 SM00267 diguanylate cyclase AMBLS11_07450 SM00710 Parallel beta-helix repeats AMBLS11_07495 SM00873 B3/4 domain AMBLS11_07495 SM00874 tRNA synthetase B5 domain AMBLS11_07495 SM00896 Ferredoxin-fold anticodon binding domain AMBLS11_07500 SM00411 bacterial (prokaryotic) histone like domain AMBLS11_07535 SM00487 DEAD-like helicases superfamily AMBLS11_07535 SM00490 helicase superfamily c-terminal domain AMBLS11_07535 SM00982 AMBLS11_07535 AMBLS11_07535 SM01058 CarD-like/TRCF domain AMBLS11_07555 SM00387 Histidine kinase-like ATPases AMBLS11_07560 SM00897 FIST N domain AMBLS11_07560 SM01204 AMBLS11_07560 AMBLS11_07635 SM00878 Biotin carboxylase C-terminal domain AMBLS11_07655 SM00422 helix_turn_helix, mercury resistance AMBLS11_07675 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_07675 SM00267 diguanylate cyclase AMBLS11_07685 SM00479 AMBLS11_07685 AMBLS11_07690 SM00387 Histidine kinase-like ATPases AMBLS11_07690 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_07690 SM00448 cheY-homologous receiver domain AMBLS11_07700 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_07715 SM00267 diguanylate cyclase AMBLS11_07720 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_07730 SM00382 ATPases associated with a variety of cellular activities AMBLS11_07730 SM00487 DEAD-like helicases superfamily AMBLS11_07730 SM00490 helicase superfamily c-terminal domain AMBLS11_07730 SM00847 Helicase associated domain (HA2) Add an annotation AMBLS11_07745 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMBLS11_07750 SM00829 Enoylreductase AMBLS11_07760 SM00479 AMBLS11_07760 AMBLS11_07770 SM00052 Putative diguanylate phosphodiesterase AMBLS11_07775 SM00382 ATPases associated with a variety of cellular activities AMBLS11_07790 SM00634 Bacterial Ig-like domain (group 1) AMBLS11_07800 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMBLS11_07800 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMBLS11_07800 SM00493 AMBLS11_07800 AMBLS11_07845 SM00587 ZnF_C4 abd HLH domain containing kinases domain AMBLS11_07850 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_07855 SM00363 S4 RNA-binding domain AMBLS11_07890 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMBLS11_07895 SM00822 AMBLS11_07895 AMBLS11_07905 SM00825 Beta-ketoacyl synthase AMBLS11_07945 SM00267 diguanylate cyclase AMBLS11_08060 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_08060 SM00091 PAS domain AMBLS11_08060 SM00387 Histidine kinase-like ATPases AMBLS11_08060 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_08060 SM00448 cheY-homologous receiver domain AMBLS11_08065 SM00448 cheY-homologous receiver domain AMBLS11_08065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_08075 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_08095 SM01387 AMBLS11_08095 AMBLS11_08100 SM00091 PAS domain AMBLS11_08100 SM00267 diguanylate cyclase AMBLS11_08105 SM00363 S4 RNA-binding domain AMBLS11_08120 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_08125 SM00448 cheY-homologous receiver domain AMBLS11_08180 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_08195 SM00267 diguanylate cyclase AMBLS11_08220 SM00822 AMBLS11_08220 AMBLS11_08240 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_08265 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBLS11_08280 SM00028 Tetratricopeptide repeats AMBLS11_08305 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBLS11_08330 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMBLS11_08335 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMBLS11_08365 SM00357 Cold shock protein domain AMBLS11_08375 SM00382 ATPases associated with a variety of cellular activities AMBLS11_08375 SM01086 C-terminal, D2-small domain, of ClpB protein AMBLS11_08380 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_08430 SM00870 AMBLS11_08430 AMBLS11_08435 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_08450 SM00936 Penicillin-binding protein 5, C-terminal domain AMBLS11_08525 SM01103 AMBLS11_08525 AMBLS11_08535 SM00382 ATPases associated with a variety of cellular activities AMBLS11_08560 SM00052 Putative diguanylate phosphodiesterase AMBLS11_08560 SM00267 diguanylate cyclase AMBLS11_08560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_08575 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBLS11_08580 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMBLS11_08580 SM00195 Dual specificity phosphatase, catalytic domain AMBLS11_08630 SM00507 HNH nucleases AMBLS11_08635 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_08635 SM00322 K homology RNA-binding domain AMBLS11_08770 SM00028 Tetratricopeptide repeats AMBLS11_08790 SM00771 ZipA, C-terminal domain (FtsZ-binding) AMBLS11_08795 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBLS11_08795 SM00292 breast cancer carboxy-terminal domain AMBLS11_08795 SM00532 Ligase N family AMBLS11_08805 SM00849 Metallo-beta-lactamase superfamily AMBLS11_08810 SM00382 ATPases associated with a variety of cellular activities AMBLS11_08835 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_08840 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_08910 SM00861 Transketolase, pyrimidine binding domain AMBLS11_08925 SM00881 CoA binding domain AMBLS11_08970 SM00642 Alpha-amylase domain AMBLS11_08975 SM00642 Alpha-amylase domain AMBLS11_08985 SM00642 Alpha-amylase domain AMBLS11_08990 SM00354 helix_turn _helix lactose operon repressor AMBLS11_09110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_09125 SM00387 Histidine kinase-like ATPases AMBLS11_09130 SM00448 cheY-homologous receiver domain AMBLS11_09130 SM00850 LytTr DNA-binding domain AMBLS11_09150 SM00822 AMBLS11_09150 AMBLS11_09165 SM00829 Enoylreductase AMBLS11_09175 SM00028 Tetratricopeptide repeats AMBLS11_09175 SM00448 cheY-homologous receiver domain AMBLS11_09185 SM00450 Rhodanese Homology Domain AMBLS11_09190 SM00054 EF-hand, calcium binding motif AMBLS11_09205 SM00487 DEAD-like helicases superfamily AMBLS11_09205 SM00490 helicase superfamily c-terminal domain AMBLS11_09210 SM00882 Coenzyme A transferase AMBLS11_09215 SM00882 Coenzyme A transferase AMBLS11_09280 SM00861 Transketolase, pyrimidine binding domain AMBLS11_09295 SM00220 Serine/Threonine protein kinases, catalytic domain AMBLS11_09330 SM00945 ProQ/FINO family AMBLS11_09335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_09335 SM00245 tail specific protease AMBLS11_09390 SM00981 AMBLS11_09390 AMBLS11_09400 SM00382 ATPases associated with a variety of cellular activities AMBLS11_09455 SM00450 Rhodanese Homology Domain AMBLS11_09455 SM00849 Metallo-beta-lactamase superfamily AMBLS11_09550 SM00100 Cyclic nucleotide-monophosphate binding domain AMBLS11_09550 SM00419 helix_turn_helix, cAMP Regulatory protein AMBLS11_09595 SM00450 Rhodanese Homology Domain AMBLS11_09605 SM01144 AMBLS11_09605 AMBLS11_09610 SM00052 Putative diguanylate phosphodiesterase AMBLS11_09650 SM00487 DEAD-like helicases superfamily AMBLS11_09705 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBLS11_09705 SM00465 GIY-YIG type nucleases (URI domain) AMBLS11_09710 SM00421 helix_turn_helix, Lux Regulon AMBLS11_09710 SM00448 cheY-homologous receiver domain AMBLS11_09825 SM00382 ATPases associated with a variety of cellular activities AMBLS11_09835 SM00843 AMBLS11_09835 AMBLS11_09840 SM00344 helix_turn_helix ASNC type AMBLS11_09845 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMBLS11_09845 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMBLS11_09850 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMBLS11_09855 SM00028 Tetratricopeptide repeats AMBLS11_09870 SM00411 bacterial (prokaryotic) histone like domain AMBLS11_09875 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_09895 SM00434 DNA Topoisomerase IV AMBLS11_09935 SM00052 Putative diguanylate phosphodiesterase AMBLS11_09935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_09935 SM00267 diguanylate cyclase AMBLS11_09955 SM01130 AMBLS11_09955 AMBLS11_10040 SM00421 helix_turn_helix, Lux Regulon AMBLS11_10040 SM00448 cheY-homologous receiver domain AMBLS11_10070 SM00642 Alpha-amylase domain AMBLS11_10080 SM00852 Probable molybdopterin binding domain AMBLS11_10100 SM00382 ATPases associated with a variety of cellular activities AMBLS11_10360 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AMBLS11_10370 SM00563 Phosphate acyltransferases AMBLS11_10415 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_10450 SM00893 Electron transfer flavoprotein domain AMBLS11_10455 SM00893 Electron transfer flavoprotein domain AMBLS11_10465 SM00528 Domain in histone-like proteins of HNS family AMBLS11_10485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_10485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_10500 SM00797 Allophanate hydrolase subunit 2 AMBLS11_10505 SM00796 Allophanate hydrolase subunit 1 AMBLS11_10555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_10560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_10595 SM00642 Alpha-amylase domain AMBLS11_10605 SM00829 Enoylreductase AMBLS11_10620 SM00855 Phosphoglycerate mutase family AMBLS11_10650 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_10655 SM00382 ATPases associated with a variety of cellular activities AMBLS11_10685 SM00852 Probable molybdopterin binding domain AMBLS11_10785 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBLS11_10820 SM00052 Putative diguanylate phosphodiesterase AMBLS11_10820 SM00267 diguanylate cyclase AMBLS11_10825 SM00849 Metallo-beta-lactamase superfamily AMBLS11_10860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMBLS11_10880 SM00382 ATPases associated with a variety of cellular activities AMBLS11_10880 SM00448 cheY-homologous receiver domain AMBLS11_10890 SM00387 Histidine kinase-like ATPases AMBLS11_10890 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_10895 SM00448 cheY-homologous receiver domain AMBLS11_10900 SM00387 Histidine kinase-like ATPases AMBLS11_10900 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_10900 SM00448 cheY-homologous receiver domain AMBLS11_10925 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_10965 SM00631 AMBLS11_10965 AMBLS11_10970 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBLS11_10985 SM01350 AMBLS11_10985 AMBLS11_10990 SM00642 Alpha-amylase domain AMBLS11_10995 SM00642 Alpha-amylase domain AMBLS11_11005 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBLS11_11075 SM00749 bacterial OsmY and nodulation domain AMBLS11_11145 SM00354 helix_turn _helix lactose operon repressor AMBLS11_11150 SM00858 AMBLS11_11150 AMBLS11_11190 SM00710 Parallel beta-helix repeats AMBLS11_11200 SM00387 Histidine kinase-like ATPases AMBLS11_11200 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_11200 SM00448 cheY-homologous receiver domain AMBLS11_11225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_11225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_11270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_11275 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_11275 SM00387 Histidine kinase-like ATPases AMBLS11_11290 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_11340 SM00849 Metallo-beta-lactamase superfamily AMBLS11_11345 SM00257 Lysin motif AMBLS11_11360 SM00840 AMBLS11_11360 AMBLS11_11380 SM00244 prohibitin homologues AMBLS11_11400 SM00642 Alpha-amylase domain AMBLS11_11410 SM00829 Enoylreductase AMBLS11_11425 SM00829 Enoylreductase AMBLS11_11495 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMBLS11_11505 SM01007 Class II Aldolase and Adducin N-terminal domain AMBLS11_11510 SM00100 Cyclic nucleotide-monophosphate binding domain AMBLS11_11510 SM00419 helix_turn_helix, cAMP Regulatory protein AMBLS11_11525 SM00825 Beta-ketoacyl synthase AMBLS11_11555 SM00382 ATPases associated with a variety of cellular activities AMBLS11_11565 SM00387 Histidine kinase-like ATPases AMBLS11_11565 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_11565 SM00448 cheY-homologous receiver domain AMBLS11_11680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBLS11_11720 SM00341 Helicase and RNase D C-terminal AMBLS11_11720 SM00474 3'-5' exonuclease AMBLS11_11750 SM00487 DEAD-like helicases superfamily AMBLS11_11750 SM00488 AMBLS11_11750 AMBLS11_11750 SM00491 AMBLS11_11750 AMBLS11_11775 SM00014 Acid phosphatase homologues AMBLS11_11790 SM00014 Acid phosphatase homologues AMBLS11_11800 SM00642 Alpha-amylase domain AMBLS11_11885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_11885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_11915 SM00387 Histidine kinase-like ATPases AMBLS11_11920 SM00493 AMBLS11_11920 AMBLS11_11935 SM00382 ATPases associated with a variety of cellular activities AMBLS11_11990 SM00422 helix_turn_helix, mercury resistance AMBLS11_12000 SM00382 ATPases associated with a variety of cellular activities AMBLS11_12025 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_12035 SM00091 PAS domain AMBLS11_12035 SM00267 diguanylate cyclase AMBLS11_12060 SM00028 Tetratricopeptide repeats AMBLS11_12080 SM00382 ATPases associated with a variety of cellular activities AMBLS11_12080 SM01086 C-terminal, D2-small domain, of ClpB protein AMBLS11_12090 SM00363 S4 RNA-binding domain AMBLS11_12160 SM00861 Transketolase, pyrimidine binding domain AMBLS11_12215 SM00382 ATPases associated with a variety of cellular activities AMBLS11_12225 SM00382 ATPases associated with a variety of cellular activities AMBLS11_12260 SM00358 Double-stranded RNA binding motif AMBLS11_12260 SM00535 Ribonuclease III family AMBLS11_12270 SM00838 Elongation factor G C-terminus AMBLS11_12455 SM00990 AMBLS11_12455 AMBLS11_12485 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_12580 SM00938 Nitrogen regulatory protein P-II AMBLS11_12665 SM00904 Riboflavin kinase AMBLS11_12710 SM00563 Phosphate acyltransferases AMBLS11_12725 SM00411 bacterial (prokaryotic) histone like domain AMBLS11_12730 SM00382 ATPases associated with a variety of cellular activities AMBLS11_12730 SM00464 Found in ATP-dependent protease La (LON) AMBLS11_12735 SM00382 ATPases associated with a variety of cellular activities AMBLS11_12735 SM00994 ClpX C4-type zinc finger AMBLS11_12735 SM01086 C-terminal, D2-small domain, of ClpB protein AMBLS11_12790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_12810 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_12810 SM01240 AMBLS11_12810 AMBLS11_12835 SM00382 ATPases associated with a variety of cellular activities AMBLS11_12840 SM00564 beta-propeller repeat AMBLS11_12845 SM00028 Tetratricopeptide repeats AMBLS11_12860 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_12865 SM00028 Tetratricopeptide repeats AMBLS11_12865 SM00257 Lysin motif AMBLS11_12880 SM00562 AMBLS11_12880 AMBLS11_12910 SM00382 ATPases associated with a variety of cellular activities AMBLS11_12960 SM00850 LytTr DNA-binding domain AMBLS11_12975 SM01323 AMBLS11_12975 AMBLS11_13045 SM00098 Alkaline phosphatase homologues AMBLS11_13050 SM00260 Two component signalling adaptor domain AMBLS11_13050 SM00448 cheY-homologous receiver domain AMBLS11_13095 SM00028 Tetratricopeptide repeats AMBLS11_13210 SM00382 ATPases associated with a variety of cellular activities AMBLS11_13215 SM00465 GIY-YIG type nucleases (URI domain) AMBLS11_13280 SM00052 Putative diguanylate phosphodiesterase AMBLS11_13280 SM00267 diguanylate cyclase AMBLS11_13300 SM00354 helix_turn _helix lactose operon repressor AMBLS11_13330 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMBLS11_13335 SM00460 Transglutaminase/protease-like homologues AMBLS11_13395 SM00422 helix_turn_helix, mercury resistance AMBLS11_13485 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMBLS11_13490 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBLS11_13545 SM00448 cheY-homologous receiver domain AMBLS11_13545 SM00850 LytTr DNA-binding domain AMBLS11_13550 SM00327 von Willebrand factor (vWF) type A domain AMBLS11_13550 SM00609 Vault protein Inter-alpha-Trypsin domain AMBLS11_13635 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBLS11_13635 SM01232 AMBLS11_13635 AMBLS11_13650 SM01321 AMBLS11_13650 AMBLS11_13655 SM00487 DEAD-like helicases superfamily AMBLS11_13655 SM00490 helicase superfamily c-terminal domain AMBLS11_13670 SM00028 Tetratricopeptide repeats AMBLS11_13670 SM00387 Histidine kinase-like ATPases AMBLS11_13670 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_13670 SM00448 cheY-homologous receiver domain AMBLS11_13680 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_13680 SM00387 Histidine kinase-like ATPases AMBLS11_13680 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_13680 SM00448 cheY-homologous receiver domain AMBLS11_13700 SM00448 cheY-homologous receiver domain AMBLS11_13700 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_13705 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_13735 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_13775 SM01081 Putative carbohydrate binding domain AMBLS11_13785 SM00354 helix_turn _helix lactose operon repressor AMBLS11_13840 SM01011 Aminopeptidase P, N-terminal domain AMBLS11_13860 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_13860 SM00387 Histidine kinase-like ATPases AMBLS11_13860 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_13860 SM00448 cheY-homologous receiver domain AMBLS11_13935 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBLS11_13935 SM00895 AMBLS11_13935 AMBLS11_13945 SM00644 AMBLS11_13945 AMBLS11_14000 SM00957 SecA DEAD-like domain AMBLS11_14000 SM00958 SecA preprotein cross-linking domain AMBLS11_14015 SM00864 Tubulin/FtsZ family, GTPase domain AMBLS11_14015 SM00865 Tubulin/FtsZ family, C-terminal domain AMBLS11_14020 SM00842 Cell division protein FtsA AMBLS11_14145 SM00028 Tetratricopeptide repeats AMBLS11_14145 SM00267 diguanylate cyclase AMBLS11_14155 SM00382 ATPases associated with a variety of cellular activities AMBLS11_14155 SM00448 cheY-homologous receiver domain AMBLS11_14160 SM00387 Histidine kinase-like ATPases AMBLS11_14200 SM00732 Likely ribonuclease with RNase H fold. AMBLS11_14210 SM00382 ATPases associated with a variety of cellular activities AMBLS11_14245 SM00028 Tetratricopeptide repeats AMBLS11_14285 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_14295 SM00360 RNA recognition motif AMBLS11_14320 SM00986 Uracil DNA glycosylase superfamily AMBLS11_14320 SM00987 UreE urease accessory protein, C-terminal domain AMBLS11_14350 SM00829 Enoylreductase AMBLS11_14355 SM00421 helix_turn_helix, Lux Regulon AMBLS11_14355 SM00448 cheY-homologous receiver domain AMBLS11_14375 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMBLS11_14380 SM00226 Low molecular weight phosphatase family AMBLS11_14405 SM00448 cheY-homologous receiver domain AMBLS11_14415 SM00448 cheY-homologous receiver domain AMBLS11_14415 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_14420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_14420 SM00387 Histidine kinase-like ATPases AMBLS11_14420 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_14455 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_14510 SM00749 bacterial OsmY and nodulation domain AMBLS11_14535 SM00421 helix_turn_helix, Lux Regulon AMBLS11_14535 SM00448 cheY-homologous receiver domain AMBLS11_14555 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBLS11_14555 SM00895 AMBLS11_14555 AMBLS11_14580 SM00267 diguanylate cyclase AMBLS11_14580 SM00448 cheY-homologous receiver domain AMBLS11_14600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_14600 SM00091 PAS domain AMBLS11_14600 SM00387 Histidine kinase-like ATPases AMBLS11_14600 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_14600 SM00448 cheY-homologous receiver domain AMBLS11_14605 SM00287 Bacterial SH3 domain homologues AMBLS11_14605 SM00644 AMBLS11_14605 AMBLS11_14650 SM00450 Rhodanese Homology Domain AMBLS11_14825 SM00448 cheY-homologous receiver domain AMBLS11_14840 SM01230 AMBLS11_14840 AMBLS11_14850 SM00091 PAS domain AMBLS11_14850 SM00387 Histidine kinase-like ATPases AMBLS11_14850 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_14855 SM00382 ATPases associated with a variety of cellular activities AMBLS11_14855 SM00448 cheY-homologous receiver domain AMBLS11_14860 SM00073 Histidine Phosphotransfer domain AMBLS11_14865 SM00563 Phosphate acyltransferases AMBLS11_14885 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_14885 SM00091 PAS domain AMBLS11_14885 SM00267 diguanylate cyclase AMBLS11_14895 SM00244 prohibitin homologues AMBLS11_14905 SM00387 Histidine kinase-like ATPases AMBLS11_14905 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_14905 SM00448 cheY-homologous receiver domain AMBLS11_14905 SM01358 AMBLS11_14905 AMBLS11_15000 SM00831 Cation transporter/ATPase, N-terminus AMBLS11_15005 SM00419 helix_turn_helix, cAMP Regulatory protein AMBLS11_15010 SM01068 Putative carbohydrate binding domain AMBLS11_15020 SM00244 prohibitin homologues AMBLS11_15025 SM00244 prohibitin homologues AMBLS11_15030 SM00267 diguanylate cyclase AMBLS11_15035 SM00460 Transglutaminase/protease-like homologues AMBLS11_15065 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_15065 SM00091 PAS domain AMBLS11_15065 SM00387 Histidine kinase-like ATPases AMBLS11_15065 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_15065 SM00448 cheY-homologous receiver domain AMBLS11_15090 SM00829 Enoylreductase AMBLS11_15105 SM00448 cheY-homologous receiver domain AMBLS11_15105 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_15110 SM00387 Histidine kinase-like ATPases AMBLS11_15110 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_15125 SM00886 Stress responsive A/B Barrel Domain AMBLS11_15170 SM00849 Metallo-beta-lactamase superfamily AMBLS11_15170 SM01027 Beta-Casp domain AMBLS11_15190 SM00996 S-adenosyl-L-homocysteine hydrolase AMBLS11_15190 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMBLS11_15195 SM00267 diguanylate cyclase AMBLS11_15210 SM00564 beta-propeller repeat AMBLS11_15215 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_15230 SM00382 ATPases associated with a variety of cellular activities AMBLS11_15260 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_15285 SM00421 helix_turn_helix, Lux Regulon AMBLS11_15285 SM00448 cheY-homologous receiver domain AMBLS11_15290 SM00091 PAS domain AMBLS11_15290 SM00387 Histidine kinase-like ATPases AMBLS11_15290 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_15290 SM00448 cheY-homologous receiver domain AMBLS11_15295 SM00897 FIST N domain AMBLS11_15295 SM01204 AMBLS11_15295 AMBLS11_15300 SM00900 AMBLS11_15300 AMBLS11_15310 SM00421 helix_turn_helix, Lux Regulon AMBLS11_15310 SM00448 cheY-homologous receiver domain AMBLS11_15320 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_15320 SM00091 PAS domain AMBLS11_15320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_15370 SM00421 helix_turn_helix, Lux Regulon AMBLS11_15400 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMBLS11_15405 SM00421 helix_turn_helix, Lux Regulon AMBLS11_15405 SM00448 cheY-homologous receiver domain AMBLS11_15410 SM00387 Histidine kinase-like ATPases AMBLS11_15420 SM00487 DEAD-like helicases superfamily AMBLS11_15420 SM00490 helicase superfamily c-terminal domain AMBLS11_15445 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_15445 SM00091 PAS domain AMBLS11_15445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_15450 SM00155 Phospholipase D. Active site motifs. AMBLS11_15480 SM00448 cheY-homologous receiver domain AMBLS11_15490 SM00387 Histidine kinase-like ATPases AMBLS11_15495 SM00849 Metallo-beta-lactamase superfamily AMBLS11_15500 SM00486 DNA polymerase type-B family AMBLS11_15515 SM00360 RNA recognition motif AMBLS11_15550 SM00986 Uracil DNA glycosylase superfamily AMBLS11_15550 SM00987 UreE urease accessory protein, C-terminal domain AMBLS11_15555 SM00052 Putative diguanylate phosphodiesterase AMBLS11_15555 SM00267 diguanylate cyclase AMBLS11_15555 SM00448 cheY-homologous receiver domain AMBLS11_15635 SM00173 Ras subfamily of RAS small GTPases AMBLS11_15635 SM00174 Rho (Ras homology) subfamily of Ras-like small GTPases AMBLS11_15635 SM00175 Rab subfamily of small GTPases AMBLS11_15640 SM00052 Putative diguanylate phosphodiesterase AMBLS11_15640 SM00267 diguanylate cyclase AMBLS11_15650 SM00563 Phosphate acyltransferases AMBLS11_15655 SM00563 Phosphate acyltransferases AMBLS11_15790 SM00052 Putative diguanylate phosphodiesterase AMBLS11_15790 SM00267 diguanylate cyclase AMBLS11_15810 SM00849 Metallo-beta-lactamase superfamily AMBLS11_15855 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_15860 SM00100 Cyclic nucleotide-monophosphate binding domain AMBLS11_15885 SM00354 helix_turn _helix lactose operon repressor AMBLS11_15890 SM00849 Metallo-beta-lactamase superfamily AMBLS11_15935 SM00900 AMBLS11_15935 AMBLS11_16015 SM00028 Tetratricopeptide repeats AMBLS11_16020 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMBLS11_16030 SM00267 diguanylate cyclase AMBLS11_16030 SM00448 cheY-homologous receiver domain AMBLS11_16035 SM00479 AMBLS11_16035 AMBLS11_16040 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_16055 SM00387 Histidine kinase-like ATPases AMBLS11_16055 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_16055 SM00448 cheY-homologous receiver domain AMBLS11_16085 SM00421 helix_turn_helix, Lux Regulon AMBLS11_16085 SM00448 cheY-homologous receiver domain AMBLS11_16105 SM01358 AMBLS11_16105 AMBLS11_16120 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_16120 SM00240 Forkhead associated domain AMBLS11_16125 SM00028 Tetratricopeptide repeats AMBLS11_16125 SM00220 Serine/Threonine protein kinases, catalytic domain AMBLS11_16130 SM00387 Histidine kinase-like ATPases AMBLS11_16135 SM00421 helix_turn_helix, Lux Regulon AMBLS11_16135 SM00448 cheY-homologous receiver domain AMBLS11_16150 SM00248 ankyrin repeats AMBLS11_16155 SM01060 AMBLS11_16155 AMBLS11_16185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_16230 SM00984 UDP binding domain AMBLS11_16340 SM00662 RNA polymerases D AMBLS11_16345 SM00363 S4 RNA-binding domain AMBLS11_16345 SM01390 AMBLS11_16345 AMBLS11_16410 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMBLS11_16415 SM01374 AMBLS11_16415 AMBLS11_16420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_16420 SM00387 Histidine kinase-like ATPases AMBLS11_16420 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_16420 SM00448 cheY-homologous receiver domain AMBLS11_16445 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMBLS11_16450 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_16450 SM00357 Cold shock protein domain AMBLS11_16450 SM00955 AMBLS11_16450 AMBLS11_16485 SM00671 Sel1-like repeats. AMBLS11_16520 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_16525 SM00387 Histidine kinase-like ATPases AMBLS11_16525 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_16525 SM00448 cheY-homologous receiver domain AMBLS11_16550 SM00344 helix_turn_helix ASNC type AMBLS11_16560 SM00357 Cold shock protein domain AMBLS11_16590 SM00448 cheY-homologous receiver domain AMBLS11_16600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_16600 SM00387 Histidine kinase-like ATPases AMBLS11_16600 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_16605 SM00448 cheY-homologous receiver domain AMBLS11_16615 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMBLS11_16645 SM00382 ATPases associated with a variety of cellular activities AMBLS11_16650 SM00421 helix_turn_helix, Lux Regulon AMBLS11_16675 SM00382 ATPases associated with a variety of cellular activities AMBLS11_16675 SM01086 C-terminal, D2-small domain, of ClpB protein AMBLS11_16695 SM00487 DEAD-like helicases superfamily AMBLS11_16695 SM00490 helicase superfamily c-terminal domain AMBLS11_16715 SM00919 Malic enzyme, NAD binding domain AMBLS11_16715 SM01274 AMBLS11_16715 AMBLS11_16765 SM00052 Putative diguanylate phosphodiesterase AMBLS11_16780 SM00382 ATPases associated with a variety of cellular activities AMBLS11_16785 SM00382 ATPases associated with a variety of cellular activities AMBLS11_16785 SM00962 SRP54-type protein, GTPase domain AMBLS11_16785 SM00963 SRP54-type protein, helical bundle domain AMBLS11_16855 SM00052 Putative diguanylate phosphodiesterase AMBLS11_16870 SM00382 ATPases associated with a variety of cellular activities AMBLS11_16875 SM00448 cheY-homologous receiver domain AMBLS11_16875 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_16880 SM00387 Histidine kinase-like ATPases AMBLS11_16880 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_16890 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_16940 SM00028 Tetratricopeptide repeats AMBLS11_16980 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_17010 SM00838 Elongation factor G C-terminus AMBLS11_17010 SM00889 Elongation factor G, domain IV AMBLS11_17025 SM00663 RNA polymerase I subunit A N-terminus AMBLS11_17050 SM00649 Ribosomal protein L11/L12 AMBLS11_17055 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMBLS11_17055 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMBLS11_17065 SM00382 ATPases associated with a variety of cellular activities AMBLS11_17090 SM00487 DEAD-like helicases superfamily AMBLS11_17090 SM00490 helicase superfamily c-terminal domain AMBLS11_17130 SM00642 Alpha-amylase domain AMBLS11_17165 SM00487 DEAD-like helicases superfamily AMBLS11_17165 SM00490 helicase superfamily c-terminal domain AMBLS11_17185 SM00849 Metallo-beta-lactamase superfamily AMBLS11_17195 SM00841 Elongation factor P, C-terminal AMBLS11_17195 SM01185 AMBLS11_17195 AMBLS11_17275 SM00244 prohibitin homologues AMBLS11_17280 SM00244 prohibitin homologues AMBLS11_17305 SM01340 AMBLS11_17305 AMBLS11_17310 SM00257 Lysin motif AMBLS11_17310 SM00646 AMBLS11_17310 AMBLS11_17380 SM00382 ATPases associated with a variety of cellular activities AMBLS11_17410 SM00849 Metallo-beta-lactamase superfamily AMBLS11_17440 SM00387 Histidine kinase-like ATPases AMBLS11_17440 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_17450 SM00382 ATPases associated with a variety of cellular activities AMBLS11_17460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_17465 SM00387 Histidine kinase-like ATPases AMBLS11_17470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_17530 SM00354 helix_turn _helix lactose operon repressor AMBLS11_17540 SM00382 ATPases associated with a variety of cellular activities AMBLS11_17545 SM00382 ATPases associated with a variety of cellular activities AMBLS11_17570 SM00382 ATPases associated with a variety of cellular activities AMBLS11_17705 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_17715 SM00867 YceI-like domain AMBLS11_17750 SM00829 Enoylreductase AMBLS11_17755 SM00267 diguanylate cyclase AMBLS11_17760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_17760 SM00387 Histidine kinase-like ATPases AMBLS11_17760 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_17760 SM00448 cheY-homologous receiver domain AMBLS11_17780 SM00420 helix_turn_helix, Deoxyribose operon repressor AMBLS11_17780 SM01134 AMBLS11_17780 AMBLS11_17795 SM00267 diguanylate cyclase AMBLS11_17810 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_17810 SM01009 AlkA N-terminal domain AMBLS11_17840 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMBLS11_17840 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMBLS11_17890 SM00965 Secretin and TonB N terminus short domain AMBLS11_17950 SM00346 helix_turn_helix isocitrate lyase regulation AMBLS11_17965 SM00656 AMBLS11_17965 AMBLS11_18020 SM00857 Resolvase, N terminal domain AMBLS11_18035 SM00974 AMBLS11_18035 AMBLS11_18045 SM00883 Chaperonin 10 Kd subunit AMBLS11_18080 SM00878 Biotin carboxylase C-terminal domain AMBLS11_18105 SM00479 AMBLS11_18105 AMBLS11_18105 SM00990 AMBLS11_18105 AMBLS11_18135 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_18155 SM00798 AICARFT/IMPCHase bienzyme AMBLS11_18155 SM00851 MGS-like domain AMBLS11_18165 SM01209 AMBLS11_18165 AMBLS11_18165 SM01210 AMBLS11_18165 AMBLS11_18190 SM00448 cheY-homologous receiver domain AMBLS11_18190 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_18195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_18195 SM00387 Histidine kinase-like ATPases AMBLS11_18195 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_18220 SM00363 S4 RNA-binding domain AMBLS11_18235 SM00382 ATPases associated with a variety of cellular activities AMBLS11_18290 SM00849 Metallo-beta-lactamase superfamily AMBLS11_18320 SM00867 YceI-like domain AMBLS11_18355 SM00382 ATPases associated with a variety of cellular activities AMBLS11_18380 SM00320 WD40 repeats AMBLS11_18400 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_18400 SM00732 Likely ribonuclease with RNase H fold. AMBLS11_18410 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMBLS11_18425 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_18460 SM00633 Glycosyl hydrolase family 10 AMBLS11_18470 SM00861 Transketolase, pyrimidine binding domain AMBLS11_18510 SM00710 Parallel beta-helix repeats AMBLS11_18520 SM00813 Alpha-L-arabinofuranosidase C-terminus AMBLS11_18550 SM00631 AMBLS11_18550 AMBLS11_18655 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_18655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_18655 SM00091 PAS domain AMBLS11_18655 SM00267 diguanylate cyclase AMBLS11_18660 SM00563 Phosphate acyltransferases AMBLS11_18680 SM00382 ATPases associated with a variety of cellular activities AMBLS11_18745 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMBLS11_18875 SM00354 helix_turn _helix lactose operon repressor AMBLS11_18895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_18905 SM01144 AMBLS11_18905 AMBLS11_18930 SM00382 ATPases associated with a variety of cellular activities AMBLS11_18970 SM00470 ParB-like nuclease domain AMBLS11_18985 SM01228 AMBLS11_18985 AMBLS11_19020 SM01234 AMBLS11_19020