AMBLS11_06520 e7f19276a86fe630f6e9a86f8f9afbab 393 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 387 2.6E-188 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMBLS11_06520 e7f19276a86fe630f6e9a86f8f9afbab 393 Gene3D G3DSA:3.40.50.1100 53 382 6.1E-180 T 14-10-2018 AMBLS11_06520 e7f19276a86fe630f6e9a86f8f9afbab 393 SUPERFAMILY SSF53686 6 387 2.23E-140 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMBLS11_06520 e7f19276a86fe630f6e9a86f8f9afbab 393 PIRSF PIRSF001413 1 393 2.8E-160 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMBLS11_06520 e7f19276a86fe630f6e9a86f8f9afbab 393 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 376 1.4E-48 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMBLS11_06520 e7f19276a86fe630f6e9a86f8f9afbab 393 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 389 49.921 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMBLS11_06520 e7f19276a86fe630f6e9a86f8f9afbab 393 Gene3D G3DSA:3.40.50.1100 9 204 6.1E-180 T 14-10-2018 AMBLS11_06520 e7f19276a86fe630f6e9a86f8f9afbab 393 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMBLS11_18485 fc217e23c9bc1bc09b774ae473f6c1c2 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_18485 fc217e23c9bc1bc09b774ae473f6c1c2 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_18485 fc217e23c9bc1bc09b774ae473f6c1c2 317 Hamap MF_00492 Transaldolase [tal]. 2 317 50.548 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_18485 fc217e23c9bc1bc09b774ae473f6c1c2 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 5.1E-99 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_18485 fc217e23c9bc1bc09b774ae473f6c1c2 317 SUPERFAMILY SSF51569 1 316 1.63E-114 T 14-10-2018 AMBLS11_18485 fc217e23c9bc1bc09b774ae473f6c1c2 317 Gene3D G3DSA:3.20.20.70 2 317 9.1E-136 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_18485 fc217e23c9bc1bc09b774ae473f6c1c2 317 TIGRFAM TIGR00874 talAB: transaldolase 3 317 5.1E-150 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_03840 1856934f0abafdb2d19ded0755d8509f 520 SUPERFAMILY SSF53067 143 319 1.48E-46 T 14-10-2018 AMBLS11_03840 1856934f0abafdb2d19ded0755d8509f 520 Gene3D G3DSA:1.10.3210.10 318 517 5.5E-62 T 14-10-2018 AMBLS11_03840 1856934f0abafdb2d19ded0755d8509f 520 SUPERFAMILY SSF53067 19 138 3.54E-36 T 14-10-2018 AMBLS11_03840 1856934f0abafdb2d19ded0755d8509f 520 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 19 314 1.7E-99 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AMBLS11_03840 1856934f0abafdb2d19ded0755d8509f 520 SUPERFAMILY SSF109604 321 509 4.08E-48 T 14-10-2018 AMBLS11_03840 1856934f0abafdb2d19ded0755d8509f 520 Gene3D G3DSA:3.30.420.40 20 311 2.3E-89 T 14-10-2018 AMBLS11_03840 1856934f0abafdb2d19ded0755d8509f 520 Gene3D G3DSA:3.30.420.150 123 303 2.3E-89 T 14-10-2018 AMBLS11_03840 1856934f0abafdb2d19ded0755d8509f 520 PIRSF PIRSF001267 10 511 3.4E-183 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AMBLS11_03840 1856934f0abafdb2d19ded0755d8509f 520 Pfam PF02541 Ppx/GppA phosphatase family 32 315 3.3E-80 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AMBLS11_08820 ee3e3676414c0ecf014a6de68fc385f9 64 Gene3D G3DSA:2.20.25.10 10 64 6.5E-20 T 14-10-2018 AMBLS11_08820 ee3e3676414c0ecf014a6de68fc385f9 64 Pfam PF03966 Trm112p-like protein 4 43 2.6E-9 T 14-10-2018 IPR005651 Trm112-like AMBLS11_08820 ee3e3676414c0ecf014a6de68fc385f9 64 SUPERFAMILY SSF158997 1 56 9.29E-18 T 14-10-2018 AMBLS11_08820 ee3e3676414c0ecf014a6de68fc385f9 64 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 24.154 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 Gene3D G3DSA:1.10.10.60 412 484 8.3E-14 T 14-10-2018 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 Gene3D G3DSA:3.40.50.2300 1 120 1.7E-6 T 14-10-2018 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 SUPERFAMILY SSF52540 130 372 5.32E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 Pfam PF06490 Flagellar regulatory protein FleQ 3 108 4.5E-23 T 14-10-2018 IPR010518 Flagellar regulatory FleQ AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 Pfam PF02954 Bacterial regulatory protein, Fis family 439 479 9.7E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 SMART SM00382 150 294 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 SUPERFAMILY SSF46689 342 481 2.64E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 Pfam PF00158 Sigma-54 interaction domain 130 296 1.9E-73 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 Gene3D G3DSA:3.40.50.300 121 301 5.6E-67 T 14-10-2018 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 462 482 2.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 462 2.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 Gene3D G3DSA:1.10.8.60 302 377 4.3E-22 T 14-10-2018 AMBLS11_04935 0e9837ca567d197fc954129c1943f5d7 487 SUPERFAMILY SSF52172 1 174 2.78E-7 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_05590 790818257ef608e16a3eaa246a87bc1c 365 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.286 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMBLS11_05590 790818257ef608e16a3eaa246a87bc1c 365 Pfam PF01264 Chorismate synthase 10 345 8.5E-141 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMBLS11_05590 790818257ef608e16a3eaa246a87bc1c 365 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMBLS11_05590 790818257ef608e16a3eaa246a87bc1c 365 SUPERFAMILY SSF103263 4 352 5.89E-147 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMBLS11_05590 790818257ef608e16a3eaa246a87bc1c 365 Gene3D G3DSA:3.60.150.10 1 363 1.6E-155 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMBLS11_05590 790818257ef608e16a3eaa246a87bc1c 365 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMBLS11_05590 790818257ef608e16a3eaa246a87bc1c 365 PIRSF PIRSF001456 3 362 7.4E-142 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMBLS11_05590 790818257ef608e16a3eaa246a87bc1c 365 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 9.2E-142 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 Pfam PF00912 Transglycosylase 173 343 6.8E-56 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 Pfam PF14814 Bifunctional transglycosylase second domain 78 161 1.8E-18 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 Gene3D G3DSA:3.40.710.10 67 723 1.7E-246 T 14-10-2018 AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 PIRSF PIRSF002799 3 783 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 Pfam PF00905 Penicillin binding protein transpeptidase domain 436 703 9.3E-22 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 SUPERFAMILY SSF53955 173 365 2.59E-64 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 SUPERFAMILY SSF56601 326 764 3.11E-111 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 Gene3D G3DSA:3.30.2060.10 75 164 1.7E-246 T 14-10-2018 AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 33 750 1.1E-265 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_01835 f28180fdc48f68e9f7fe82bedb844be0 783 Gene3D G3DSA:1.10.3810.10 165 368 1.7E-246 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_02345 a64cb16f53ba44050138a3358a58a7df 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 31.193 T 14-10-2018 IPR033747 Class I PurE AMBLS11_02345 a64cb16f53ba44050138a3358a58a7df 164 SUPERFAMILY SSF52255 3 160 1.96E-63 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMBLS11_02345 a64cb16f53ba44050138a3358a58a7df 164 Gene3D G3DSA:3.40.50.7700 1 162 1.5E-69 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMBLS11_02345 a64cb16f53ba44050138a3358a58a7df 164 PIRSF PIRSF001338 1 164 9.9E-67 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AMBLS11_02345 a64cb16f53ba44050138a3358a58a7df 164 SMART SM01001 2 153 1.4E-97 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMBLS11_02345 a64cb16f53ba44050138a3358a58a7df 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 160 8.1E-62 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMBLS11_02345 a64cb16f53ba44050138a3358a58a7df 164 Pfam PF00731 AIR carboxylase 3 151 3.5E-62 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 PIRSF PIRSF000410 1 276 6.0E-74 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 SUPERFAMILY SSF53335 76 271 1.23E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 11 57 1.9E-9 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 SMART SM00138 8 273 6.2E-99 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.5E-63 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 Gene3D G3DSA:1.10.155.10 2 74 6.5E-10 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 4.1E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 4.1E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 4.1E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 4.1E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 4.1E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 4.1E-41 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 SUPERFAMILY SSF47757 6 75 5.1E-15 T 14-10-2018 AMBLS11_04715 84c76b26a6337927f6be468803e779eb 276 Gene3D G3DSA:3.40.50.150 75 275 2.7E-59 T 14-10-2018 AMBLS11_11855 225f408cecea85de3d4a5a0680c23716 209 Gene3D G3DSA:3.40.50.880 7 209 1.3E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_11855 225f408cecea85de3d4a5a0680c23716 209 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 11 209 33.225 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMBLS11_11855 225f408cecea85de3d4a5a0680c23716 209 PIRSF PIRSF000495 10 209 1.0E-65 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMBLS11_11855 225f408cecea85de3d4a5a0680c23716 209 Pfam PF00117 Glutamine amidotransferase class-I 23 206 2.2E-22 T 14-10-2018 IPR017926 Glutamine amidotransferase AMBLS11_11855 225f408cecea85de3d4a5a0680c23716 209 SUPERFAMILY SSF52317 10 208 3.8E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_11855 225f408cecea85de3d4a5a0680c23716 209 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 12 208 7.1E-66 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMBLS11_01335 e91b7dca62cae76ca372dd6c2224c301 130 Gene3D G3DSA:3.40.50.1450 19 129 5.5E-24 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily AMBLS11_01335 e91b7dca62cae76ca372dd6c2224c301 130 SUPERFAMILY SSF53163 18 125 9.68E-26 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily AMBLS11_01335 e91b7dca62cae76ca372dd6c2224c301 130 PRINTS PR00446 Hydrogen uptake protein signature 84 100 6.3E-15 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMBLS11_01335 e91b7dca62cae76ca372dd6c2224c301 130 PRINTS PR00446 Hydrogen uptake protein signature 20 32 6.3E-15 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMBLS11_01335 e91b7dca62cae76ca372dd6c2224c301 130 PRINTS PR00446 Hydrogen uptake protein signature 32 43 6.3E-15 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMBLS11_01335 e91b7dca62cae76ca372dd6c2224c301 130 PRINTS PR00446 Hydrogen uptake protein signature 52 69 6.3E-15 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMBLS11_01335 e91b7dca62cae76ca372dd6c2224c301 130 PRINTS PR00446 Hydrogen uptake protein signature 73 83 6.3E-15 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMBLS11_01335 e91b7dca62cae76ca372dd6c2224c301 130 Pfam PF01750 Hydrogenase maturation protease 37 110 2.0E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMBLS11_01335 e91b7dca62cae76ca372dd6c2224c301 130 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 22 115 1.2E-23 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.2E-227 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Gene3D G3DSA:2.40.50.140 6 97 1.5E-16 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SUPERFAMILY SSF50249 342 440 6.49E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 4.4E-96 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 4.4E-96 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 4.4E-96 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 4.4E-96 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 4.4E-96 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 4.4E-96 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.4E-96 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 4.4E-96 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 4.4E-96 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SUPERFAMILY SSF50249 106 184 3.86E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SUPERFAMILY SSF50249 189 277 1.12E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SUPERFAMILY SSF50249 429 536 1.79E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Gene3D G3DSA:2.40.50.140 445 528 8.8E-19 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SMART SM00316 103 171 7.8E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SMART SM00316 275 347 8.5E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SMART SM00316 190 260 2.3E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SMART SM00316 362 434 2.7E-22 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SMART SM00316 19 87 0.0088 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SMART SM00316 449 520 1.9E-16 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Gene3D G3DSA:2.40.50.140 98 181 5.2E-6 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Gene3D G3DSA:2.40.50.140 358 444 8.1E-26 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Gene3D G3DSA:2.40.50.140 269 357 1.6E-30 T 14-10-2018 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Pfam PF00575 S1 RNA binding domain 105 171 1.0E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Pfam PF00575 S1 RNA binding domain 190 260 4.9E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Pfam PF00575 S1 RNA binding domain 275 347 7.5E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Pfam PF00575 S1 RNA binding domain 361 434 2.1E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Pfam PF00575 S1 RNA binding domain 449 520 6.2E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 Pfam PF00575 S1 RNA binding domain 19 86 6.6E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SUPERFAMILY SSF50249 255 359 1.86E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 PIRSF PIRSF002111 1 534 2.1E-219 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMBLS11_09875 0b22b0e33c3c08a4cd72571cf0a62f6b 556 SUPERFAMILY SSF50249 2 112 1.55E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_13955 f651fffefa9640c8b27435214cd8b961 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 117 280 1.9E-57 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AMBLS11_13955 f651fffefa9640c8b27435214cd8b961 284 SUPERFAMILY SSF51690 117 281 1.29E-58 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AMBLS11_13955 f651fffefa9640c8b27435214cd8b961 284 SUPERFAMILY SSF54675 6 114 1.33E-30 T 14-10-2018 AMBLS11_13955 f651fffefa9640c8b27435214cd8b961 284 PIRSF PIRSF006250 4 284 7.4E-99 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AMBLS11_13955 f651fffefa9640c8b27435214cd8b961 284 Gene3D G3DSA:3.90.1170.20 8 280 2.2E-113 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AMBLS11_13955 f651fffefa9640c8b27435214cd8b961 284 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 13 281 2.0E-94 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AMBLS11_13955 f651fffefa9640c8b27435214cd8b961 284 Gene3D G3DSA:3.20.20.70 125 271 2.2E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_13955 f651fffefa9640c8b27435214cd8b961 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 29 114 2.6E-27 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AMBLS11_08470 310c1f5cb0997842b0af3dcc103e9520 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 8.8E-46 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMBLS11_08470 310c1f5cb0997842b0af3dcc103e9520 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 2.0E-75 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMBLS11_08470 310c1f5cb0997842b0af3dcc103e9520 156 PIRSF PIRSF004505 1 155 1.2E-39 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMBLS11_08470 310c1f5cb0997842b0af3dcc103e9520 156 SUPERFAMILY SSF75217 2 154 4.19E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMBLS11_08470 310c1f5cb0997842b0af3dcc103e9520 156 Gene3D G3DSA:3.40.1280.10 1 156 7.3E-50 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMBLS11_08470 310c1f5cb0997842b0af3dcc103e9520 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.415 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 SUPERFAMILY SSF53738 182 290 5.49E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 SUPERFAMILY SSF53738 5 206 7.46E-33 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 2.8E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 267 282 2.8E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 251 2.8E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 199 218 2.8E-28 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 SUPERFAMILY SSF55957 403 485 5.93E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 292 401 4.3E-23 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 407 482 4.4E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 Gene3D G3DSA:3.40.120.10 201 283 5.4E-29 T 14-10-2018 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 Gene3D G3DSA:3.40.120.10 4 146 4.0E-49 T 14-10-2018 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 134 9.5E-32 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 183 287 9.5E-21 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 Gene3D G3DSA:3.40.120.10 284 400 1.4E-32 T 14-10-2018 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 SUPERFAMILY SSF53738 292 396 2.32E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08875 9f28c73e59f73b0df3022d3939057b67 486 Gene3D G3DSA:3.30.310.50 403 485 1.7E-26 T 14-10-2018 AMBLS11_07795 5674245f9ec480d4ea2a83a7195f1d48 446 Pfam PF04996 Succinylarginine dihydrolase 3 444 7.4E-227 T 14-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMBLS11_07795 5674245f9ec480d4ea2a83a7195f1d48 446 Gene3D G3DSA:3.75.10.20 1 446 1.8E-207 T 14-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMBLS11_07795 5674245f9ec480d4ea2a83a7195f1d48 446 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 444 1.1E-224 T 14-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMBLS11_07795 5674245f9ec480d4ea2a83a7195f1d48 446 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 445 60.014 T 14-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMBLS11_07795 5674245f9ec480d4ea2a83a7195f1d48 446 SUPERFAMILY SSF55909 3 445 9.42E-210 T 14-10-2018 AMBLS11_06495 be2fc83b83b7548032b135b4de161f7b 224 Pfam PF00072 Response regulator receiver domain 3 111 2.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06495 be2fc83b83b7548032b135b4de161f7b 224 Gene3D G3DSA:1.10.10.10 123 223 2.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_06495 be2fc83b83b7548032b135b4de161f7b 224 Gene3D G3DSA:3.40.50.2300 1 122 7.0E-40 T 14-10-2018 AMBLS11_06495 be2fc83b83b7548032b135b4de161f7b 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 1.9E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_06495 be2fc83b83b7548032b135b4de161f7b 224 SMART SM00862 145 220 1.1E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_06495 be2fc83b83b7548032b135b4de161f7b 224 SMART SM00448 1 112 7.3E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06495 be2fc83b83b7548032b135b4de161f7b 224 SUPERFAMILY SSF52172 1 175 3.95E-39 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_04995 1c44981319615373366ab81dd05cf13d 135 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 126 4.2E-33 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AMBLS11_04995 1c44981319615373366ab81dd05cf13d 135 SUPERFAMILY SSF101801 53 133 2.49E-24 T 14-10-2018 IPR036429 SpoA-like superfamily AMBLS11_04995 1c44981319615373366ab81dd05cf13d 135 Gene3D G3DSA:2.30.330.10 41 135 1.4E-33 T 14-10-2018 IPR036429 SpoA-like superfamily AMBLS11_04995 1c44981319615373366ab81dd05cf13d 135 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 55 125 7.1E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMBLS11_04995 1c44981319615373366ab81dd05cf13d 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 101 116 1.9E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMBLS11_04995 1c44981319615373366ab81dd05cf13d 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 88 101 1.9E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMBLS11_04995 1c44981319615373366ab81dd05cf13d 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 72 88 1.9E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMBLS11_04995 1c44981319615373366ab81dd05cf13d 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 55 71 1.9E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMBLS11_08065 fe8d03f0b0a56e12d719787215013e28 333 SMART SM00448 9 121 6.3E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_08065 fe8d03f0b0a56e12d719787215013e28 333 Gene3D G3DSA:3.40.50.2300 5 134 8.4E-38 T 14-10-2018 AMBLS11_08065 fe8d03f0b0a56e12d719787215013e28 333 SMART SM00471 151 289 3.3E-7 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_08065 fe8d03f0b0a56e12d719787215013e28 333 SUPERFAMILY SSF109604 136 320 6.91E-39 T 14-10-2018 AMBLS11_08065 fe8d03f0b0a56e12d719787215013e28 333 SUPERFAMILY SSF52172 7 136 1.57E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_08065 fe8d03f0b0a56e12d719787215013e28 333 Gene3D G3DSA:1.10.3210.10 135 333 4.9E-73 T 14-10-2018 AMBLS11_08065 fe8d03f0b0a56e12d719787215013e28 333 Pfam PF01966 HD domain 158 279 2.5E-16 T 14-10-2018 IPR006674 HD domain AMBLS11_08065 fe8d03f0b0a56e12d719787215013e28 333 Pfam PF00072 Response regulator receiver domain 12 121 5.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 Gene3D G3DSA:1.20.1640.10 504 1015 2.1E-252 T 14-10-2018 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 SUPERFAMILY SSF82866 295 490 3.27E-38 T 14-10-2018 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 Gene3D G3DSA:3.30.70.1430 48 805 2.1E-252 T 14-10-2018 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 SUPERFAMILY SSF82693 48 139 1.52E-15 T 14-10-2018 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 Gene3D G3DSA:3.30.70.1320 141 329 2.1E-252 T 14-10-2018 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 SUPERFAMILY SSF82714 721 795 1.15E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 SUPERFAMILY SSF82866 794 1020 4.58E-47 T 14-10-2018 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 SUPERFAMILY SSF82714 187 268 1.23E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 Gene3D G3DSA:3.30.2090.10 710 797 2.1E-252 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 Gene3D G3DSA:3.30.70.1440 661 858 2.1E-252 T 14-10-2018 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 Gene3D G3DSA:3.30.70.1430 561 660 2.1E-252 T 14-10-2018 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 Gene3D G3DSA:3.30.2090.10 182 272 2.1E-252 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 Pfam PF00873 AcrB/AcrD/AcrF family 12 1018 7.3E-157 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 4.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 4.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 4.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 4.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 PRINTS PR00702 Acriflavin resistance protein family signature 18 42 4.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 4.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06260 628b32d38f4ddded837f3f50ab912a83 1054 Gene3D G3DSA:1.20.1640.10 18 503 2.1E-252 T 14-10-2018 AMBLS11_16780 4b3e7f68cb6fec538276ffe743d9ac61 237 SMART SM00382 27 213 2.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_16780 4b3e7f68cb6fec538276ffe743d9ac61 237 SUPERFAMILY SSF52540 1 224 2.1E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_16780 4b3e7f68cb6fec538276ffe743d9ac61 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_16780 4b3e7f68cb6fec538276ffe743d9ac61 237 Pfam PF00005 ABC transporter 18 165 6.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_16780 4b3e7f68cb6fec538276ffe743d9ac61 237 Gene3D G3DSA:3.40.50.300 1 229 7.6E-65 T 14-10-2018 AMBLS11_16780 4b3e7f68cb6fec538276ffe743d9ac61 237 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.8E-88 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 Pfam PF01556 DnaJ C terminal domain 119 331 7.2E-47 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 Pfam PF00684 DnaJ central domain 145 205 1.1E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 3.6E-141 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 Pfam PF00226 DnaJ domain 5 67 1.2E-27 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 SUPERFAMILY SSF46565 1 107 3.01E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 Gene3D G3DSA:2.60.260.20 253 361 7.2E-29 T 14-10-2018 AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 42.557 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 SUPERFAMILY SSF57938 132 208 2.62E-23 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 SUPERFAMILY SSF49493 257 342 2.49E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 PRINTS PR00625 DnaJ domain signature 7 25 7.7E-32 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 PRINTS PR00625 DnaJ domain signature 42 62 7.7E-32 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 PRINTS PR00625 DnaJ domain signature 25 40 7.7E-32 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 PRINTS PR00625 DnaJ domain signature 62 81 7.7E-32 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 SUPERFAMILY SSF49493 112 265 6.54E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 Gene3D G3DSA:2.10.230.10 137 207 2.0E-25 T 14-10-2018 AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 Gene3D G3DSA:1.10.287.110 1 111 5.6E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMBLS11_06675 45e6a0b3d80b4c262d063846e0dca489 376 SMART SM00271 4 62 2.5E-29 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_07155 134e06bb8550a6eccebc2b935f5bc7c0 167 Pfam PF09349 OHCU decarboxylase 7 162 1.7E-35 T 14-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AMBLS11_07155 134e06bb8550a6eccebc2b935f5bc7c0 167 SUPERFAMILY SSF158694 2 165 2.09E-42 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AMBLS11_07155 134e06bb8550a6eccebc2b935f5bc7c0 167 Gene3D G3DSA:1.10.3330.10 15 167 6.8E-52 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AMBLS11_07155 134e06bb8550a6eccebc2b935f5bc7c0 167 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 7 165 1.7E-48 T 14-10-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 AMBLS11_08785 e69fd513645f30456f783e9f186cae77 1175 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1159 8.0E-56 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMBLS11_08785 e69fd513645f30456f783e9f186cae77 1175 PIRSF PIRSF005719 632 1175 1.6E-117 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein AMBLS11_08785 e69fd513645f30456f783e9f186cae77 1175 PIRSF PIRSF005719 1 535 2.0E-130 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein AMBLS11_08785 e69fd513645f30456f783e9f186cae77 1175 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1166 0.0 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMBLS11_08785 e69fd513645f30456f783e9f186cae77 1175 Gene3D G3DSA:3.40.50.300 930 1175 1.6E-45 T 14-10-2018 AMBLS11_08785 e69fd513645f30456f783e9f186cae77 1175 Gene3D G3DSA:3.40.50.300 1 325 6.2E-53 T 14-10-2018 AMBLS11_08785 e69fd513645f30456f783e9f186cae77 1175 SUPERFAMILY SSF52540 2 1151 8.6E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08785 e69fd513645f30456f783e9f186cae77 1175 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1168 22.109 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMBLS11_00225 abb45d18c6c813b6d8620b994ba71f97 225 SUPERFAMILY SSF47781 17 87 3.93E-6 T 14-10-2018 IPR010994 RuvA domain 2-like AMBLS11_00225 abb45d18c6c813b6d8620b994ba71f97 225 Gene3D G3DSA:3.40.140.10 101 224 4.3E-41 T 14-10-2018 AMBLS11_00225 abb45d18c6c813b6d8620b994ba71f97 225 Pfam PF04002 RadC-like JAB domain 104 222 1.3E-41 T 14-10-2018 IPR025657 RadC-like JAB domain AMBLS11_00225 abb45d18c6c813b6d8620b994ba71f97 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.2E-68 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 AMBLS11_00225 abb45d18c6c813b6d8620b994ba71f97 225 SUPERFAMILY SSF102712 118 192 5.1E-5 T 14-10-2018 AMBLS11_00225 abb45d18c6c813b6d8620b994ba71f97 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AMBLS11_17490 5df7ee15945914aaa97db0e77f276bb5 981 SUPERFAMILY SSF56935 34 981 1.28E-75 T 14-10-2018 AMBLS11_17490 5df7ee15945914aaa97db0e77f276bb5 981 Pfam PF00593 TonB dependent receptor 445 980 2.2E-26 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_17490 5df7ee15945914aaa97db0e77f276bb5 981 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 164 1.3E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_17490 5df7ee15945914aaa97db0e77f276bb5 981 Gene3D G3DSA:2.170.130.10 50 169 2.1E-18 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_17490 5df7ee15945914aaa97db0e77f276bb5 981 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 981 1.6E-184 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_09660 646597edfe658890e79922de243ff938 225 Pfam PF14103 Domain of unknown function (DUF4276) 8 218 2.6E-42 T 14-10-2018 IPR025455 Protein of unknown function DUF4276 AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 27.966 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 283 2.1E-84 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 Pfam PF07549 SecD/SecF GG Motif 32 58 2.8E-9 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 SUPERFAMILY SSF82866 73 290 1.57E-41 T 14-10-2018 AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 Gene3D G3DSA:1.20.1640.10 96 296 7.0E-14 T 14-10-2018 AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 2.0E-54 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_12965 78d581832a7debb468426a048ad9198a 313 Pfam PF02355 Protein export membrane protein 109 290 4.4E-68 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMBLS11_10615 41ea3adaa91a6fb5e63688d1a23c8af4 410 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 136 2.7E-19 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMBLS11_10615 41ea3adaa91a6fb5e63688d1a23c8af4 410 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 140 241 5.4E-19 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMBLS11_10615 41ea3adaa91a6fb5e63688d1a23c8af4 410 Gene3D G3DSA:1.10.540.10 1 138 3.3E-54 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMBLS11_10615 41ea3adaa91a6fb5e63688d1a23c8af4 410 Gene3D G3DSA:2.40.110.10 139 253 8.9E-49 T 14-10-2018 AMBLS11_10615 41ea3adaa91a6fb5e63688d1a23c8af4 410 Gene3D G3DSA:1.20.140.10 254 409 3.0E-39 T 14-10-2018 AMBLS11_10615 41ea3adaa91a6fb5e63688d1a23c8af4 410 SUPERFAMILY SSF47203 251 405 2.26E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_10615 41ea3adaa91a6fb5e63688d1a23c8af4 410 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 403 1.2E-36 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_10615 41ea3adaa91a6fb5e63688d1a23c8af4 410 SUPERFAMILY SSF56645 1 266 4.45E-72 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.042 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 Gene3D G3DSA:3.40.50.620 1 162 8.0E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 SUPERFAMILY SSF52374 4 156 1.64E-46 T 14-10-2018 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 5.1E-59 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.4E-53 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.4E-53 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.4E-53 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.4E-53 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.4E-53 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 69 7.0E-5 T 14-10-2018 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 4.2E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMBLS11_00270 5c6933ae0d08bbdfc9d979186c1c7821 162 Pfam PF01467 Cytidylyltransferase-like 6 134 3.3E-25 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.2E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.2E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.2E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 SUPERFAMILY SSF51735 5 243 2.52E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 Gene3D G3DSA:3.40.50.720 1 245 1.8E-60 T 14-10-2018 AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07300 b11615720199e11cbb2601f0f74a08fe 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 240 1.3E-44 T 14-10-2018 AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 6.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 8.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 8.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 4 252 3.2E-103 T 14-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 Gene3D G3DSA:3.40.50.720 1 251 1.9E-78 T 14-10-2018 AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 5.2E-59 T 14-10-2018 AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 SUPERFAMILY SSF51735 7 251 4.05E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11120 a255ab292d1dc711e80fd9899c46ddfe 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_04600 0fa0456533b42b1d88aea5fa630b7d08 171 PIRSF PIRSF002094 1 171 1.9E-48 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AMBLS11_04600 0fa0456533b42b1d88aea5fa630b7d08 171 SUPERFAMILY SSF111384 25 167 6.28E-32 T 14-10-2018 AMBLS11_04600 0fa0456533b42b1d88aea5fa630b7d08 171 Pfam PF03938 Outer membrane protein (OmpH-like) 13 166 3.2E-27 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AMBLS11_04600 0fa0456533b42b1d88aea5fa630b7d08 171 Gene3D G3DSA:3.30.910.20 25 168 1.1E-39 T 14-10-2018 IPR024930 Skp domain superfamily AMBLS11_04600 0fa0456533b42b1d88aea5fa630b7d08 171 SMART SM00935 14 168 2.2E-42 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AMBLS11_08455 5a4f356cfb850633ff957025cd44e642 340 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 36 202 24.396 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AMBLS11_08455 5a4f356cfb850633ff957025cd44e642 340 Pfam PF05036 Sporulation related domain 267 336 6.4E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMBLS11_08455 5a4f356cfb850633ff957025cd44e642 340 SUPERFAMILY SSF110997 266 335 4.58E-10 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMBLS11_08455 5a4f356cfb850633ff957025cd44e642 340 Pfam PF03330 Lytic transglycolase 110 198 3.7E-26 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMBLS11_08455 5a4f356cfb850633ff957025cd44e642 340 SUPERFAMILY SSF50685 108 199 1.0E-9 T 14-10-2018 IPR036908 RlpA-like domain superfamily AMBLS11_08455 5a4f356cfb850633ff957025cd44e642 340 Gene3D G3DSA:2.40.40.10 109 203 6.7E-37 T 14-10-2018 IPR036908 RlpA-like domain superfamily AMBLS11_08455 5a4f356cfb850633ff957025cd44e642 340 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 112 326 5.2E-48 T 14-10-2018 IPR012997 Rare lipoprotein A AMBLS11_18580 4c10d2de4b2711d3a9357fbac5bef194 448 Pfam PF01554 MatE 24 185 2.0E-14 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_18580 4c10d2de4b2711d3a9357fbac5bef194 448 Pfam PF01554 MatE 248 405 2.4E-13 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_18580 4c10d2de4b2711d3a9357fbac5bef194 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 416 9.3E-71 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 SMART SM00448 2 116 3.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 SUPERFAMILY SSF52172 1 137 2.56E-27 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 Gene3D G3DSA:3.40.50.12740 3 212 6.2E-52 T 14-10-2018 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 6.5E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 SMART SM00421 151 208 2.3E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 Pfam PF00072 Response regulator receiver domain 4 116 8.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15285 e03887edaa09fb61072840a6a9aecfbb 219 SUPERFAMILY SSF46894 148 212 1.39E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_13815 9d957725d409e2a17a53c2b30ca023d0 429 SUPERFAMILY SSF55920 190 417 4.71E-59 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMBLS11_13815 9d957725d409e2a17a53c2b30ca023d0 429 SUPERFAMILY SSF53092 40 189 1.74E-26 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMBLS11_13815 9d957725d409e2a17a53c2b30ca023d0 429 Gene3D G3DSA:3.90.230.10 190 421 7.5E-63 T 14-10-2018 AMBLS11_13815 9d957725d409e2a17a53c2b30ca023d0 429 Gene3D G3DSA:3.40.350.10 24 189 2.3E-45 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMBLS11_13815 9d957725d409e2a17a53c2b30ca023d0 429 Pfam PF00557 Metallopeptidase family M24 199 404 1.0E-46 T 14-10-2018 IPR000994 Peptidase M24 AMBLS11_13815 9d957725d409e2a17a53c2b30ca023d0 429 Pfam PF01321 Creatinase/Prolidase N-terminal domain 57 190 1.9E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 SUPERFAMILY SSF69055 298 390 1.02E-27 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 388 45.469 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 387 2.8E-154 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 SUPERFAMILY SSF51735 2 150 6.04E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 235 5.8E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 PIRSF PIRSF006205 1 394 3.3E-147 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 5.8E-36 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 Gene3D G3DSA:1.10.1740.10 308 392 6.0E-26 T 14-10-2018 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 SUPERFAMILY SSF55347 126 270 1.9E-60 T 14-10-2018 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 7.4E-44 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMBLS11_04585 748bc88078db2a7157a3234272ad7869 395 Gene3D G3DSA:3.40.50.720 1 150 1.6E-51 T 14-10-2018 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Gene3D G3DSA:3.30.450.20 81 201 4.4E-7 T 14-10-2018 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SMART SM00091 214 282 7.4 T 14-10-2018 IPR000014 PAS domain AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SMART SM00091 94 162 2.9 T 14-10-2018 IPR000014 PAS domain AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SMART SM00091 324 390 0.29 T 14-10-2018 IPR000014 PAS domain AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SMART SM00388 475 539 2.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Gene3D G3DSA:1.10.287.130 462 541 4.8E-9 T 14-10-2018 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Gene3D G3DSA:3.30.450.20 202 275 7.6E-7 T 14-10-2018 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SUPERFAMILY SSF55874 530 691 1.17E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 2.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 2.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 690 2.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 671 2.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SUPERFAMILY SSF47384 460 539 1.02E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SUPERFAMILY SSF55785 203 253 3.24E-6 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Gene3D G3DSA:3.30.565.10 542 702 5.1E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Pfam PF08448 PAS fold 331 438 2.8E-15 T 14-10-2018 IPR013656 PAS fold-4 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Gene3D G3DSA:3.40.50.2300 715 837 8.9E-14 T 14-10-2018 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SUPERFAMILY SSF52172 718 835 7.24E-13 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Pfam PF00512 His Kinase A (phospho-acceptor) domain 475 539 4.5E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 584 691 1.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Pfam PF00072 Response regulator receiver domain 723 831 1.9E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SMART SM00387 583 693 2.3E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SUPERFAMILY SSF55785 309 435 3.84E-12 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SUPERFAMILY SSF55785 81 195 1.07E-6 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 321 443 3.0E-7 T 14-10-2018 IPR000014 PAS domain AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 SMART SM00448 718 831 0.0014 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Gene3D G3DSA:3.30.450.20 316 453 8.6E-16 T 14-10-2018 AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Pfam PF13188 PAS domain 215 245 0.0053 T 14-10-2018 IPR000014 PAS domain AMBLS11_15290 5c261dcd5c561a6801ce22d7f600cea3 837 Pfam PF13188 PAS domain 94 127 0.058 T 14-10-2018 IPR000014 PAS domain AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 SMART SM00962 100 296 5.0E-115 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.1E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 SUPERFAMILY SSF52540 42 352 2.41E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.7E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 Gene3D G3DSA:1.20.120.140 4 305 1.4E-122 T 14-10-2018 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 SMART SM00963 1 86 1.4E-34 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.178 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 Gene3D G3DSA:3.40.50.300 90 285 1.4E-122 T 14-10-2018 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 Pfam PF02978 Signal peptide binding domain 329 427 1.2E-34 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.8E-176 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 SMART SM00382 99 247 2.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 Gene3D G3DSA:1.10.260.30 328 451 5.8E-45 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMBLS11_05905 1729886cca1d7146d32d9d826a421cc0 479 SUPERFAMILY SSF47446 298 431 2.62E-46 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMBLS11_12815 36c5b7369b4595790e627cc78db8d2e0 450 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 14 362 2.0E-131 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMBLS11_12815 36c5b7369b4595790e627cc78db8d2e0 450 Pfam PF13742 OB-fold nucleic acid binding domain 13 106 2.2E-27 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AMBLS11_12815 36c5b7369b4595790e627cc78db8d2e0 450 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 10 445 28.896 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMBLS11_12815 36c5b7369b4595790e627cc78db8d2e0 450 Pfam PF02601 Exonuclease VII, large subunit 129 442 1.7E-97 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AMBLS11_13555 b818047a0a679b315a589755cc6935e4 189 Pfam PF04203 Sortase family 70 180 2.7E-17 T 14-10-2018 IPR005754 Sortase family AMBLS11_13555 b818047a0a679b315a589755cc6935e4 189 TIGRFAM TIGR01076 sortase_fam: sortase 69 174 3.3E-11 T 14-10-2018 IPR005754 Sortase family AMBLS11_13555 b818047a0a679b315a589755cc6935e4 189 TIGRFAM TIGR03784 marine_sortase: sortase, marine proteobacterial type 10 180 4.9E-60 T 14-10-2018 IPR022445 Sortase, proteobacterial type AMBLS11_13555 b818047a0a679b315a589755cc6935e4 189 Gene3D G3DSA:2.40.260.10 35 189 8.3E-21 T 14-10-2018 IPR023365 Sortase domain superfamily AMBLS11_13555 b818047a0a679b315a589755cc6935e4 189 SUPERFAMILY SSF63817 55 177 2.09E-18 T 14-10-2018 IPR023365 Sortase domain superfamily AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 3.5E-66 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 3.5E-66 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 166 3.5E-66 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 488 505 3.5E-66 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 166 185 3.5E-66 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 3.5E-66 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 268 284 3.5E-66 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 74 99 3.5E-66 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 298 317 3.5E-66 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 Gene3D G3DSA:3.60.20.40 405 585 1.7E-59 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 Pfam PF01019 Gamma-glutamyltranspeptidase 67 580 4.0E-148 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 Gene3D G3DSA:1.10.246.130 284 404 2.0E-33 T 14-10-2018 AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 SUPERFAMILY SSF56235 45 584 2.7E-161 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_10330 1dc77ffd4dfb04b3e1ac08d4f3c33fc6 585 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 53 577 3.0E-123 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 259 9.1E-10 T 14-10-2018 IPR000014 PAS domain AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 SUPERFAMILY SSF58104 244 430 1.7E-50 T 14-10-2018 AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 SUPERFAMILY SSF55785 150 252 7.68E-19 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 Gene3D G3DSA:1.10.287.950 251 432 1.7E-43 T 14-10-2018 AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 Gene3D G3DSA:3.30.450.20 150 250 1.3E-17 T 14-10-2018 AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 299 430 8.9E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 Pfam PF13426 PAS domain 34 134 0.16 T 14-10-2018 IPR000014 PAS domain AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 Pfam PF13426 PAS domain 155 254 2.6E-9 T 14-10-2018 IPR000014 PAS domain AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 SUPERFAMILY SSF55785 34 135 7.15E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 SMART SM00283 237 432 1.3E-17 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_03955 7ea09d105478df141269afac368c5d23 432 Gene3D G3DSA:3.30.450.20 25 135 2.3E-7 T 14-10-2018 AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 18 415 1.2E-119 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 Gene3D G3DSA:2.130.10.10 36 418 3.8E-96 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 SUPERFAMILY SSF50998 49 386 3.73E-79 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 Pfam PF13360 PQQ-like domain 57 111 6.7E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 Pfam PF13360 PQQ-like domain 123 340 7.2E-45 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 11 417 39.158 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 SMART SM00564 176 207 0.57 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 SMART SM00564 310 341 1.4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 SMART SM00564 135 167 0.013 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 SMART SM00564 77 108 0.0012 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 SMART SM00564 350 382 8.6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_12840 f6f157692bcc7b1dc389473a39456424 419 SMART SM00564 272 303 0.069 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_08355 35ad4ad38b553386305fb5e4021ea997 202 Pfam PF00849 RNA pseudouridylate synthase 29 173 1.2E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_08355 35ad4ad38b553386305fb5e4021ea997 202 Gene3D G3DSA:3.30.70.580 18 92 1.7E-27 T 14-10-2018 AMBLS11_08355 35ad4ad38b553386305fb5e4021ea997 202 Gene3D G3DSA:3.30.70.1560 93 192 1.3E-40 T 14-10-2018 AMBLS11_08355 35ad4ad38b553386305fb5e4021ea997 202 SUPERFAMILY SSF55120 27 201 1.2E-41 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_08355 35ad4ad38b553386305fb5e4021ea997 202 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 64 78 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMBLS11_08355 35ad4ad38b553386305fb5e4021ea997 202 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 33 199 1.7E-55 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMBLS11_00530 c05ee530e6d988d110bf46f0fb1e8d67 213 ProSitePatterns PS00856 Guanylate kinase-like signature. 45 62 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMBLS11_00530 c05ee530e6d988d110bf46f0fb1e8d67 213 Gene3D G3DSA:3.30.63.10 42 101 2.5E-70 T 14-10-2018 AMBLS11_00530 c05ee530e6d988d110bf46f0fb1e8d67 213 SUPERFAMILY SSF52540 6 196 5.78E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00530 c05ee530e6d988d110bf46f0fb1e8d67 213 Pfam PF00625 Guanylate kinase 8 188 9.9E-59 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMBLS11_00530 c05ee530e6d988d110bf46f0fb1e8d67 213 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 189 1.6E-73 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AMBLS11_00530 c05ee530e6d988d110bf46f0fb1e8d67 213 Hamap MF_00328 Guanylate kinase [gmk]. 4 192 37.024 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AMBLS11_00530 c05ee530e6d988d110bf46f0fb1e8d67 213 SMART SM00072 5 192 1.8E-69 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMBLS11_00530 c05ee530e6d988d110bf46f0fb1e8d67 213 Gene3D G3DSA:3.40.50.300 10 188 2.5E-70 T 14-10-2018 AMBLS11_02035 881ffb73b1b72b45bed73b9c257c1e7b 355 SUPERFAMILY SSF53067 12 178 4.26E-10 T 14-10-2018 AMBLS11_02035 881ffb73b1b72b45bed73b9c257c1e7b 355 Gene3D G3DSA:3.30.1490.300 88 147 5.8E-68 T 14-10-2018 AMBLS11_02035 881ffb73b1b72b45bed73b9c257c1e7b 355 SUPERFAMILY SSF53067 186 346 6.1E-10 T 14-10-2018 AMBLS11_02035 881ffb73b1b72b45bed73b9c257c1e7b 355 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 350 3.6E-73 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM AMBLS11_02035 881ffb73b1b72b45bed73b9c257c1e7b 355 PIRSF PIRSF019169 1 351 3.2E-95 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM AMBLS11_02035 881ffb73b1b72b45bed73b9c257c1e7b 355 Pfam PF11104 Type IV pilus assembly protein PilM; 14 350 6.0E-102 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM AMBLS11_02035 881ffb73b1b72b45bed73b9c257c1e7b 355 Gene3D G3DSA:3.30.420.40 13 348 5.8E-68 T 14-10-2018 AMBLS11_02035 881ffb73b1b72b45bed73b9c257c1e7b 355 Gene3D G3DSA:3.30.420.40 187 314 5.8E-68 T 14-10-2018 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 SUPERFAMILY SSF50800 71 166 2.97E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 Gene3D G3DSA:2.40.33.10 71 169 1.9E-153 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 SUPERFAMILY SSF52935 326 477 2.88E-35 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 SUPERFAMILY SSF51621 2 342 7.07E-87 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 Gene3D G3DSA:3.20.20.60 3 338 1.9E-153 T 14-10-2018 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 477 4.7E-165 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 3.2E-127 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.1E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 PRINTS PR01050 Pyruvate kinase family signature 187 201 1.1E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 PRINTS PR01050 Pyruvate kinase family signature 316 332 1.1E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 PRINTS PR01050 Pyruvate kinase family signature 297 315 1.1E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 PRINTS PR01050 Pyruvate kinase family signature 220 246 1.1E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 PRINTS PR01050 Pyruvate kinase family signature 247 271 1.1E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 PRINTS PR01050 Pyruvate kinase family signature 272 296 1.1E-51 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 475 2.2E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_11050 d39ee8708aadc31004626b6e382307f7 478 Gene3D G3DSA:3.40.1380.20 339 473 1.9E-153 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 SMART SM00388 243 311 7.1E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 306 1.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 Gene3D G3DSA:3.30.565.10 317 465 2.8E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 SMART SM00387 352 464 2.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 SUPERFAMILY SSF47384 230 305 3.53E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 458 6.6E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 SUPERFAMILY SSF55874 315 460 6.42E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06080 86053cb8e99a5d25bacd4cde27e47b54 465 Gene3D G3DSA:1.10.287.130 187 306 6.9E-15 T 14-10-2018 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 Gene3D G3DSA:3.30.420.40 242 484 1.1E-80 T 14-10-2018 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 250 434 2.2E-31 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 6.2E-79 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 SUPERFAMILY SSF53067 242 482 3.56E-59 T 14-10-2018 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 3.8E-175 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 PIRSF PIRSF000538 1 489 1.4E-138 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 Gene3D G3DSA:3.30.420.40 1 241 5.2E-91 T 14-10-2018 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 348 368 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMBLS11_18480 5179ef4a8cd5ecd39816f23fc3d30765 494 SUPERFAMILY SSF53067 2 242 1.22E-73 T 14-10-2018 AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 Gene3D G3DSA:3.40.1190.20 232 499 9.3E-85 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 241 497 2.2E-67 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 PIRSF PIRSF017184 12 499 6.9E-132 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 SUPERFAMILY SSF64153 13 253 4.84E-58 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 231 498 22.432 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 16 217 22.9 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 Gene3D G3DSA:3.40.50.10260 10 222 5.2E-58 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 437 447 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 Pfam PF03853 YjeF-related protein N-terminus 37 196 3.2E-38 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 SUPERFAMILY SSF53613 240 498 9.82E-72 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 Pfam PF01256 Carbohydrate kinase 255 492 2.4E-58 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMBLS11_17320 df8dc32b32368f8660ed319ee20f681d 499 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 17 216 1.1E-42 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Gene3D G3DSA:3.40.50.12740 1266 1394 6.5E-42 T 14-10-2018 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SMART SM00388 850 915 3.9E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SUPERFAMILY SSF52172 1264 1392 6.55E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Pfam PF07494 Two component regulator propeller 131 154 0.0071 T 14-10-2018 IPR011110 Two component regulator propeller AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Pfam PF07494 Two component regulator propeller 39 58 9.3E-4 T 14-10-2018 IPR011110 Two component regulator propeller AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Pfam PF07494 Two component regulator propeller 491 513 2.6E-4 T 14-10-2018 IPR011110 Two component regulator propeller AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1004 1018 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1022 1032 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1063 1076 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1039 1057 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SUPERFAMILY SSF52172 1093 1223 6.4E-11 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Pfam PF07495 Y_Y_Y domain 709 772 3.1E-16 T 14-10-2018 IPR011123 Two component regulator three Y AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SUPERFAMILY SSF63829 41 222 3.6E-13 T 14-10-2018 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SMART SM00387 962 1079 5.7E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Gene3D G3DSA:1.10.287.130 815 913 4.1E-29 T 14-10-2018 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Pfam PF00512 His Kinase A (phospho-acceptor) domain 851 914 1.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SUPERFAMILY SSF63829 403 620 4.74E-19 T 14-10-2018 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Gene3D G3DSA:3.40.50.2300 1082 1229 1.3E-9 T 14-10-2018 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Gene3D G3DSA:3.30.565.10 916 1081 3.9E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SUPERFAMILY SSF55874 904 1074 1.15E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Pfam PF00072 Response regulator receiver domain 1269 1387 2.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SMART SM00448 1267 1387 2.8E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SUPERFAMILY SSF63829 183 388 1.9E-9 T 14-10-2018 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Gene3D G3DSA:2.130.10.10 342 656 1.6E-52 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Gene3D G3DSA:2.60.40.10 662 785 2.1E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 963 1074 4.2E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 SUPERFAMILY SSF47384 836 916 7.85E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_11565 e6ffcfeab78384f5b894bf47592e2734 1395 Gene3D G3DSA:2.130.10.10 24 338 2.9E-64 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 SUPERFAMILY SSF47384 164 208 4.51E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 Gene3D G3DSA:3.30.450.20 1 128 9.8E-23 T 14-10-2018 AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 SMART SM00387 310 418 1.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 416 3.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 9.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 9.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 9.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 9.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 Gene3D G3DSA:3.30.565.10 264 416 1.7E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 SUPERFAMILY SSF55874 264 418 9.3E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15490 6e4ed53db3c59f53293d5f93b3e9cc72 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 170 266 2.5E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_05365 2c4a3be8fd5c32d0202c891ddaafffdc 87 Pfam PF07615 YKOF-related Family 5 68 2.2E-5 T 14-10-2018 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative AMBLS11_05365 2c4a3be8fd5c32d0202c891ddaafffdc 87 Gene3D G3DSA:3.30.70.930 1 77 2.9E-13 T 14-10-2018 IPR029756 MTH1187/YkoF-like AMBLS11_05365 2c4a3be8fd5c32d0202c891ddaafffdc 87 SUPERFAMILY SSF89957 1 81 8.16E-19 T 14-10-2018 IPR029756 MTH1187/YkoF-like AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 Pfam PF13426 PAS domain 305 409 3.2E-8 T 14-10-2018 IPR000014 PAS domain AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 Gene3D G3DSA:3.30.450.20 157 278 8.2E-7 T 14-10-2018 AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 411 8.7E-13 T 14-10-2018 IPR000014 PAS domain AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 Gene3D G3DSA:3.30.70.270 421 581 3.0E-9 T 14-10-2018 AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 SMART SM00052 604 848 2.6E-87 T 14-10-2018 IPR001633 EAL domain AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 Gene3D G3DSA:3.30.450.20 279 409 1.3E-14 T 14-10-2018 AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 SUPERFAMILY SSF55073 428 553 5.34E-6 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 Pfam PF00563 EAL domain 611 843 1.8E-63 T 14-10-2018 IPR001633 EAL domain AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 SUPERFAMILY SSF55785 281 409 5.15E-12 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 SMART SM00091 164 231 7.5 T 14-10-2018 IPR000014 PAS domain AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 SMART SM00091 295 361 3.8E-4 T 14-10-2018 IPR000014 PAS domain AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 SUPERFAMILY SSF141868 611 854 3.14E-73 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 Pfam PF00990 Diguanylate cyclase, GGDEF domain 422 568 2.8E-5 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06685 8e5540b92e029d5568eab7882ac68623 861 Gene3D G3DSA:3.20.20.450 607 855 1.8E-77 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 Gene3D G3DSA:3.30.360.80 710 782 8.7E-24 T 14-10-2018 AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 Gene3D G3DSA:3.40.50.300 443 630 5.0E-40 T 14-10-2018 AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 SMART SM00487 153 361 1.1E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 SMART SM00490 514 598 2.2E-14 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 SUPERFAMILY SSF52540 292 640 2.0E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 Gene3D G3DSA:3.40.50.10810 153 442 7.2E-89 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 956 27.706 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 Pfam PF00271 Helicase conserved C-terminal domain 489 598 1.3E-13 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 Pfam PF12137 RNA polymerase recycling family C-terminal 602 954 7.8E-119 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 SUPERFAMILY SSF52540 146 395 1.15E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 Pfam PF00176 SNF2 family N-terminal domain 176 364 7.9E-17 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 Gene3D G3DSA:2.30.30.140 5 57 2.4E-20 T 14-10-2018 AMBLS11_02770 c05b6440c01d799b1e1877088e615761 957 Gene3D G3DSA:2.30.30.930 59 117 1.3E-19 T 14-10-2018 AMBLS11_07750 f8eba3a625e2ff028e7c811ce68a8625 325 Gene3D G3DSA:3.90.180.10 15 323 1.2E-95 T 14-10-2018 AMBLS11_07750 f8eba3a625e2ff028e7c811ce68a8625 325 SMART SM00829 11 323 5.8E-25 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_07750 f8eba3a625e2ff028e7c811ce68a8625 325 Gene3D G3DSA:3.40.50.720 120 262 1.2E-95 T 14-10-2018 AMBLS11_07750 f8eba3a625e2ff028e7c811ce68a8625 325 SUPERFAMILY SSF50129 1 139 6.6E-32 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_07750 f8eba3a625e2ff028e7c811ce68a8625 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 86 6.2E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_07750 f8eba3a625e2ff028e7c811ce68a8625 325 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 324 1.1E-110 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AMBLS11_07750 f8eba3a625e2ff028e7c811ce68a8625 325 Pfam PF00107 Zinc-binding dehydrogenase 151 275 1.1E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMBLS11_07750 f8eba3a625e2ff028e7c811ce68a8625 325 SUPERFAMILY SSF51735 111 285 9.21E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_02435 fbe3d84eee66cc913c731a1e5a960dc9 677 Gene3D G3DSA:3.40.50.1700 474 677 2.3E-15 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMBLS11_02435 fbe3d84eee66cc913c731a1e5a960dc9 677 SUPERFAMILY SSF51445 98 403 3.47E-70 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_02435 fbe3d84eee66cc913c731a1e5a960dc9 677 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 336 353 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AMBLS11_02435 fbe3d84eee66cc913c731a1e5a960dc9 677 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 102 398 4.8E-78 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_02435 fbe3d84eee66cc913c731a1e5a960dc9 677 Gene3D G3DSA:3.20.20.300 50 449 3.2E-102 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 Gene3D G3DSA:3.40.50.300 3 199 1.1E-65 T 14-10-2018 AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 Pfam PF16124 RecQ zinc-binding 530 575 5.9E-6 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 SMART SM00490 242 323 4.4E-27 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 Gene3D G3DSA:1.10.10.10 518 662 2.4E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 SMART SM00487 13 209 1.1E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 132 141 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 Gene3D G3DSA:3.40.50.300 201 382 3.5E-46 T 14-10-2018 AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 Pfam PF00271 Helicase conserved C-terminal domain 216 322 1.3E-18 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 346 7.0E-112 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 Pfam PF00270 DEAD/DEAH box helicase 20 181 5.4E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_13655 767de3b10c9c1c855408b799ac94463a 663 SUPERFAMILY SSF52540 58 336 1.37E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 7.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 PRINTS PR00996 Glutamate methyltransferase family signature 40 53 7.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 PRINTS PR00996 Glutamate methyltransferase family signature 110 130 7.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 7.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 PRINTS PR00996 Glutamate methyltransferase family signature 77 89 7.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 7.4E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 Pfam PF01739 CheR methyltransferase, SAM binding domain 84 269 1.8E-57 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 SUPERFAMILY SSF53335 84 273 4.17E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 Gene3D G3DSA:1.10.155.10 6 82 1.3E-23 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 SUPERFAMILY SSF47757 10 83 1.83E-18 T 14-10-2018 AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 SMART SM00138 18 276 2.8E-95 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 Pfam PF03705 CheR methyltransferase, all-alpha domain 19 69 8.4E-15 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 Gene3D G3DSA:3.40.50.150 83 276 5.3E-65 T 14-10-2018 AMBLS11_01565 9ea7b526f6613dd73e3c711b5ca696ab 277 PIRSF PIRSF000410 1 277 3.3E-93 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR AMBLS11_07655 c4d5b490de02cfa09293fb13bceca8db 135 Pfam PF09278 MerR, DNA binding 52 117 1.3E-16 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding AMBLS11_07655 c4d5b490de02cfa09293fb13bceca8db 135 Gene3D G3DSA:1.10.1660.10 2 131 5.1E-27 T 14-10-2018 AMBLS11_07655 c4d5b490de02cfa09293fb13bceca8db 135 SMART SM00422 10 77 3.5E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_07655 c4d5b490de02cfa09293fb13bceca8db 135 SUPERFAMILY SSF46955 10 124 3.66E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_07655 c4d5b490de02cfa09293fb13bceca8db 135 Pfam PF00376 MerR family regulatory protein 12 46 7.9E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Pfam PF04546 Sigma-70, non-essential region 137 345 1.9E-67 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Gene3D G3DSA:1.10.10.10 526 610 8.7E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Pfam PF04539 Sigma-70 region 3 455 530 2.3E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Gene3D G3DSA:1.10.220.120 1 64 5.1E-29 T 14-10-2018 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 400 413 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 SUPERFAMILY SSF88659 449 522 5.01E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Gene3D G3DSA:1.10.10.10 449 525 4.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 372 597 2.2E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Gene3D G3DSA:1.10.601.10 111 445 6.6E-140 T 14-10-2018 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 372 608 6.9E-121 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Pfam PF04545 Sigma-70, region 4 544 597 1.0E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 569 595 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 SUPERFAMILY SSF88659 506 608 1.37E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 SUPERFAMILY SSF88946 113 443 4.93E-101 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 PRINTS PR00046 Major sigma-70 factor signature 569 584 6.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 PRINTS PR00046 Major sigma-70 factor signature 548 560 6.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 PRINTS PR00046 Major sigma-70 factor signature 424 432 6.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 PRINTS PR00046 Major sigma-70 factor signature 400 413 6.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 PRINTS PR00046 Major sigma-70 factor signature 584 595 6.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 4.4E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 1.6E-29 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 609 46.55 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AMBLS11_03120 ae574a4177f383df7f7a6384b0d33308 610 Pfam PF04542 Sigma-70 region 2 376 445 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_04225 73a101753969405db12548d0e6a30725 398 SUPERFAMILY SSF109604 143 313 3.43E-26 T 14-10-2018 AMBLS11_04225 73a101753969405db12548d0e6a30725 398 Gene3D G3DSA:1.10.3210.10 4 315 1.3E-67 T 14-10-2018 AMBLS11_04225 73a101753969405db12548d0e6a30725 398 Pfam PF13487 HD domain 204 266 1.9E-13 T 14-10-2018 AMBLS11_04225 73a101753969405db12548d0e6a30725 398 SMART SM00471 149 285 6.4E-4 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_04225 73a101753969405db12548d0e6a30725 398 Pfam PF11871 Domain of unknown function (DUF3391) 4 119 2.2E-15 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 AMBLS11_18515 0e8d7ec50c910b6e4ba8f7ba78009e17 266 SUPERFAMILY SSF49899 60 249 2.15E-33 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMBLS11_18515 0e8d7ec50c910b6e4ba8f7ba78009e17 266 Pfam PF00457 Glycosyl hydrolases family 11 62 248 1.3E-39 T 14-10-2018 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMBLS11_18515 0e8d7ec50c910b6e4ba8f7ba78009e17 266 Gene3D G3DSA:2.60.120.180 61 259 2.1E-38 T 14-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMBLS11_08625 6e8b4555a22e6a6f92ee0511b08ef6e2 316 Gene3D G3DSA:2.30.30.60 118 174 8.9E-8 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_08625 6e8b4555a22e6a6f92ee0511b08ef6e2 316 Pfam PF00924 Mechanosensitive ion channel 69 178 1.2E-15 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_08625 6e8b4555a22e6a6f92ee0511b08ef6e2 316 SUPERFAMILY SSF50182 103 174 3.6E-12 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 Pfam PF03466 LysR substrate binding domain 101 293 2.1E-15 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 Gene3D G3DSA:3.40.190.10 171 265 6.0E-54 T 14-10-2018 AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 SUPERFAMILY SSF53850 90 294 4.89E-42 T 14-10-2018 AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 Gene3D G3DSA:1.10.10.10 1 89 1.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 SUPERFAMILY SSF46785 2 85 9.8E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_08030 287de864ba8d749a4e696f7869dfda1e 300 Gene3D G3DSA:3.40.190.10 90 290 6.0E-54 T 14-10-2018 AMBLS11_18720 1d87ee2e12e642110171abea5d9722e6 168 Pfam PF04542 Sigma-70 region 2 9 73 2.0E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_18720 1d87ee2e12e642110171abea5d9722e6 168 Gene3D G3DSA:1.10.1740.10 2 87 4.0E-13 T 14-10-2018 AMBLS11_18720 1d87ee2e12e642110171abea5d9722e6 168 Pfam PF08281 Sigma-70, region 4 110 159 8.3E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_18720 1d87ee2e12e642110171abea5d9722e6 168 SUPERFAMILY SSF88659 87 161 1.13E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_18720 1d87ee2e12e642110171abea5d9722e6 168 SUPERFAMILY SSF88946 5 83 5.69E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_18720 1d87ee2e12e642110171abea5d9722e6 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 161 8.5E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_18720 1d87ee2e12e642110171abea5d9722e6 168 Gene3D G3DSA:1.10.10.10 92 165 1.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_17805 848d461d3d7d9d3d84afaef969f3ad0f 181 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 95 174 1.9E-36 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMBLS11_17805 848d461d3d7d9d3d84afaef969f3ad0f 181 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 175 38.595 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AMBLS11_17805 848d461d3d7d9d3d84afaef969f3ad0f 181 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 96 175 4.0E-32 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMBLS11_17805 848d461d3d7d9d3d84afaef969f3ad0f 181 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 145 151 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMBLS11_17805 848d461d3d7d9d3d84afaef969f3ad0f 181 SUPERFAMILY SSF53155 4 99 2.55E-9 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMBLS11_17805 848d461d3d7d9d3d84afaef969f3ad0f 181 SUPERFAMILY SSF46767 94 175 5.49E-31 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMBLS11_17805 848d461d3d7d9d3d84afaef969f3ad0f 181 Gene3D G3DSA:3.30.160.70 1 90 1.2E-10 T 14-10-2018 AMBLS11_17805 848d461d3d7d9d3d84afaef969f3ad0f 181 Gene3D G3DSA:1.10.10.10 94 178 2.3E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_12330 391486b388caeb1c438c15f91c07dad6 173 Pfam PF05069 Phage virion morphogenesis family 13 161 8.4E-17 T 14-10-2018 IPR006522 Phage virion morphogensis protein AMBLS11_17725 69e3ab9069a05a032b90e843fdb11653 694 Gene3D G3DSA:2.40.170.20 187 693 1.2E-69 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_17725 69e3ab9069a05a032b90e843fdb11653 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 159 1.7E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_17725 69e3ab9069a05a032b90e843fdb11653 694 Pfam PF00593 TonB dependent receptor 198 693 9.0E-46 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_17725 69e3ab9069a05a032b90e843fdb11653 694 Gene3D G3DSA:2.170.130.10 29 164 3.3E-16 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_17725 69e3ab9069a05a032b90e843fdb11653 694 SUPERFAMILY SSF56935 23 693 5.86E-98 T 14-10-2018 AMBLS11_07775 00557338178a0789737ee784139b63eb 236 SMART SM00382 33 221 2.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_07775 00557338178a0789737ee784139b63eb 236 SUPERFAMILY SSF52540 5 227 2.6E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_07775 00557338178a0789737ee784139b63eb 236 Gene3D G3DSA:3.40.50.300 2 235 1.1E-70 T 14-10-2018 AMBLS11_07775 00557338178a0789737ee784139b63eb 236 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_07775 00557338178a0789737ee784139b63eb 236 Pfam PF00005 ABC transporter 24 172 2.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_07775 00557338178a0789737ee784139b63eb 236 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 3.6E-99 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 AMBLS11_09215 5b6dbd5bcafc88b82f13af1e78507f74 235 Pfam PF01144 Coenzyme A transferase 10 218 4.9E-72 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMBLS11_09215 5b6dbd5bcafc88b82f13af1e78507f74 235 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 218 2.0E-72 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AMBLS11_09215 5b6dbd5bcafc88b82f13af1e78507f74 235 SMART SM00882 8 219 2.5E-87 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMBLS11_09215 5b6dbd5bcafc88b82f13af1e78507f74 235 Gene3D G3DSA:3.40.1080.10 2 228 4.7E-96 T 14-10-2018 AMBLS11_09215 5b6dbd5bcafc88b82f13af1e78507f74 235 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AMBLS11_09215 5b6dbd5bcafc88b82f13af1e78507f74 235 SUPERFAMILY SSF100950 4 226 2.21E-86 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 279 4.5E-61 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 4.5E-61 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 249 264 4.5E-61 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 4.5E-61 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 4.5E-61 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 217 239 4.5E-61 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 4.5E-61 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 4.5E-61 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 4.5E-61 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 Gene3D G3DSA:3.50.50.60 326 449 5.1E-103 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 SUPERFAMILY SSF52833 2 102 5.81E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 4.9E-37 T 14-10-2018 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 4.9E-37 T 14-10-2018 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 4.9E-37 T 14-10-2018 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 4.9E-37 T 14-10-2018 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 218 237 4.9E-37 T 14-10-2018 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 217 497 2.0E-42 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 Pfam PF13192 Thioredoxin domain 122 199 1.7E-11 T 14-10-2018 IPR012336 Thioredoxin-like fold AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 PIRSF PIRSF000238 1 520 3.1E-212 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 SUPERFAMILY SSF51905 216 514 3.27E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 SUPERFAMILY SSF52833 106 197 9.42E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 Gene3D G3DSA:3.50.50.60 217 507 5.1E-103 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 2 516 4.1E-230 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 Gene3D G3DSA:3.40.30.80 1 201 4.4E-60 T 14-10-2018 AMBLS11_08145 3b5bc482832f839dad72a215c1f86096 529 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 Gene3D G3DSA:3.40.50.970 3 326 1.2E-130 T 14-10-2018 AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 SUPERFAMILY SSF52922 534 663 3.27E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 660 1.8E-304 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 SUPERFAMILY SSF52518 335 526 5.27E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 SMART SM00861 355 526 2.8E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 Gene3D G3DSA:3.40.50.970 327 538 1.4E-79 T 14-10-2018 AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 Pfam PF02780 Transketolase, C-terminal domain 541 656 1.4E-15 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 Gene3D G3DSA:3.40.50.920 539 662 9.0E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 SUPERFAMILY SSF52518 5 330 8.57E-120 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 3.5E-165 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_03770 1a82368cb77e6b7a561d454ea94b97b8 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 525 2.0E-42 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_18250 83e077027e6d640d741b15fb8f13e529 208 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 8.9E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18250 83e077027e6d640d741b15fb8f13e529 208 SUPERFAMILY SSF54523 14 96 4.71E-9 T 14-10-2018 AMBLS11_18250 83e077027e6d640d741b15fb8f13e529 208 PRINTS PR00885 Bacterial general secretion pathway protein H signature 158 173 2.7E-15 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AMBLS11_18250 83e077027e6d640d741b15fb8f13e529 208 PRINTS PR00885 Bacterial general secretion pathway protein H signature 9 23 2.7E-15 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AMBLS11_18250 83e077027e6d640d741b15fb8f13e529 208 PRINTS PR00885 Bacterial general secretion pathway protein H signature 24 38 2.7E-15 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AMBLS11_18250 83e077027e6d640d741b15fb8f13e529 208 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 11 179 4.5E-16 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AMBLS11_18250 83e077027e6d640d741b15fb8f13e529 208 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 32 2.3E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18250 83e077027e6d640d741b15fb8f13e529 208 Gene3D G3DSA:3.55.40.10 41 207 3.7E-44 T 14-10-2018 AMBLS11_09780 e974b1d5c7f89c7c7509bd8bee3789cd 115 Gene3D G3DSA:1.10.10.370 45 115 5.6E-31 T 14-10-2018 AMBLS11_09780 e974b1d5c7f89c7c7509bd8bee3789cd 115 Pfam PF04358 DsrC like protein 10 115 6.1E-43 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AMBLS11_09780 e974b1d5c7f89c7c7509bd8bee3789cd 115 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 9 115 4.3E-48 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AMBLS11_09780 e974b1d5c7f89c7c7509bd8bee3789cd 115 Gene3D G3DSA:3.30.1420.10 7 44 2.8E-9 T 14-10-2018 AMBLS11_09780 e974b1d5c7f89c7c7509bd8bee3789cd 115 SUPERFAMILY SSF69721 7 115 1.27E-39 T 14-10-2018 IPR025526 DsrC-like domain superfamily AMBLS11_09780 e974b1d5c7f89c7c7509bd8bee3789cd 115 PIRSF PIRSF006223 8 115 1.1E-39 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 318 1.5E-30 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.9E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 SUPERFAMILY SSF52467 178 361 7.12E-39 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 SUPERFAMILY SSF52518 355 540 3.34E-56 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 Gene3D G3DSA:3.40.50.1220 180 328 3.3E-35 T 14-10-2018 AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 524 9.5E-37 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 Gene3D G3DSA:3.40.50.970 335 540 1.9E-52 T 14-10-2018 AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 Gene3D G3DSA:3.40.50.970 1 178 1.2E-62 T 14-10-2018 AMBLS11_17250 3d7cfd70aa0c94a69825af5c5841b054 546 SUPERFAMILY SSF52518 1 177 1.36E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 Pfam PF00801 PKD domain 688 745 1.0E-13 T 14-10-2018 IPR000601 PKD domain AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 SUPERFAMILY SSF52743 109 434 7.07E-72 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 Pfam PF00082 Subtilase family 158 421 7.2E-40 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 162 173 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 385 395 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 Gene3D G3DSA:2.60.40.10 675 760 8.5E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 Pfam PF01483 Proprotein convertase P-domain 590 668 1.5E-18 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 Gene3D G3DSA:2.60.120.260 564 674 4.5E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 Gene3D G3DSA:3.40.50.200 117 451 1.5E-107 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 PRINTS PR00723 Subtilisin serine protease family (S8) signature 157 176 5.4E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 PRINTS PR00723 Subtilisin serine protease family (S8) signature 384 400 5.4E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 PRINTS PR00723 Subtilisin serine protease family (S8) signature 217 230 5.4E-19 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 SUPERFAMILY SSF49785 577 672 9.35E-22 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 SMART SM00089 681 759 2.1E-17 T 14-10-2018 IPR022409 PKD/Chitinase domain AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 SUPERFAMILY SSF49299 678 758 1.83E-20 T 14-10-2018 IPR035986 PKD domain superfamily AMBLS11_15400 edd51cca1d288d453ef54a298de7cd8d 839 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 221 231 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMBLS11_07570 75f1d7fbb6c79e49117e8ee7cf264074 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.4E-88 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMBLS11_07570 75f1d7fbb6c79e49117e8ee7cf264074 269 Gene3D G3DSA:3.60.10.10 1 269 6.4E-79 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_07570 75f1d7fbb6c79e49117e8ee7cf264074 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.4E-99 T 14-10-2018 AMBLS11_07570 75f1d7fbb6c79e49117e8ee7cf264074 269 SUPERFAMILY SSF56219 1 268 8.64E-86 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_07570 75f1d7fbb6c79e49117e8ee7cf264074 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AMBLS11_07570 75f1d7fbb6c79e49117e8ee7cf264074 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 9.3E-18 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMBLS11_06560 8fbc60764543f569831565f9660d30ed 197 SUPERFAMILY SSF46785 4 86 2.02E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_06560 8fbc60764543f569831565f9660d30ed 197 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 171 9.7E-53 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMBLS11_06560 8fbc60764543f569831565f9660d30ed 197 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 9 176 3.1E-33 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMBLS11_06560 8fbc60764543f569831565f9660d30ed 197 Gene3D G3DSA:1.10.10.10 3 85 7.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_06560 8fbc60764543f569831565f9660d30ed 197 PIRSF PIRSF019345 1 194 1.4E-60 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMBLS11_06560 8fbc60764543f569831565f9660d30ed 197 Gene3D G3DSA:1.10.10.10 86 183 1.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_06560 8fbc60764543f569831565f9660d30ed 197 SUPERFAMILY SSF46785 89 162 1.7E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_05695 078bb437f6ef32e3f55a6e5152bcc635 240 Gene3D G3DSA:1.10.1670.10 23 211 8.8E-63 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMBLS11_05695 078bb437f6ef32e3f55a6e5152bcc635 240 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 45 179 3.8E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMBLS11_05695 078bb437f6ef32e3f55a6e5152bcc635 240 Hamap MF_00942 Endonuclease III [nth]. 11 220 32.419 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMBLS11_05695 078bb437f6ef32e3f55a6e5152bcc635 240 SMART SM00478 49 196 9.1E-44 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMBLS11_05695 078bb437f6ef32e3f55a6e5152bcc635 240 SUPERFAMILY SSF48150 14 211 7.54E-57 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMBLS11_05695 078bb437f6ef32e3f55a6e5152bcc635 240 Gene3D G3DSA:1.10.340.30 32 143 8.8E-63 T 14-10-2018 AMBLS11_05695 078bb437f6ef32e3f55a6e5152bcc635 240 PIRSF PIRSF001435 10 218 5.5E-42 T 14-10-2018 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 Gene3D G3DSA:1.10.287.130 552 639 2.2E-27 T 14-10-2018 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SMART SM00091 333 402 9.6 T 14-10-2018 IPR000014 PAS domain AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SMART SM00091 440 509 0.018 T 14-10-2018 IPR000014 PAS domain AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SUPERFAMILY SSF47384 561 642 1.39E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 Pfam PF13426 PAS domain 463 555 1.1E-18 T 14-10-2018 IPR000014 PAS domain AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 Pfam PF00072 Response regulator receiver domain 829 943 9.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SUPERFAMILY SSF52172 825 953 1.14E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SMART SM00388 576 641 9.5E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 Pfam PF00512 His Kinase A (phospho-acceptor) domain 577 641 1.3E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 764 782 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 788 801 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 PRINTS PR00344 Bacterial sensor protein C-terminal signature 729 743 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SUPERFAMILY SSF55874 630 806 1.01E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SMART SM00448 827 943 4.9E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 Gene3D G3DSA:3.30.450.20 326 437 3.8E-6 T 14-10-2018 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SMART SM00387 688 804 4.5E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SUPERFAMILY SSF55785 450 556 1.73E-24 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 Gene3D G3DSA:3.30.450.20 438 551 1.3E-37 T 14-10-2018 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 Gene3D G3DSA:3.30.565.10 640 808 4.6E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 446 562 3.2E-18 T 14-10-2018 IPR000014 PAS domain AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 Gene3D G3DSA:3.40.50.12740 826 959 1.7E-42 T 14-10-2018 AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 688 803 2.4E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03745 df457e474c3abd3b5c24c0cc452625cf 959 SMART SM00086 515 556 2.2E-7 T 14-10-2018 IPR001610 PAC motif AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 SMART SM01018 307 390 7.9E-46 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 Gene3D G3DSA:3.40.50.280 394 546 4.2E-57 T 14-10-2018 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 Gene3D G3DSA:1.10.1240.10 299 387 3.7E-41 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 SUPERFAMILY SSF51717 8 282 3.79E-93 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 TIGRFAM TIGR02082 metH: methionine synthase 5 842 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 Pfam PF02310 B12 binding domain 399 493 2.4E-20 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 587 858 1.0E-126 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 SUPERFAMILY SSF52242 393 545 4.97E-48 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 Gene3D G3DSA:3.20.20.20 2 295 8.8E-133 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 Pfam PF02607 B12 binding domain 310 382 3.8E-26 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 SUPERFAMILY SSF47644 302 389 6.41E-30 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 Pfam PF00809 Pterin binding enzyme 12 250 2.2E-60 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 SUPERFAMILY SSF56507 553 872 1.19E-127 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 Gene3D G3DSA:3.10.196.10 559 872 1.6E-143 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 PIRSF PIRSF000381 2 845 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_05105 a980c5b051cc6b3c9755a2e987550307 874 Gene3D G3DSA:1.10.288.10 586 742 1.6E-143 T 14-10-2018 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 SUPERFAMILY SSF56024 504 686 4.04E-69 T 14-10-2018 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 112 7.3E-32 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 681 1.4E-250 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 SUPERFAMILY SSF56024 320 498 1.1E-50 T 14-10-2018 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 Pfam PF02503 Polyphosphate kinase middle domain 122 322 3.6E-39 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 Gene3D G3DSA:3.30.870.10 323 503 4.2E-67 T 14-10-2018 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 685 26.418 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 Gene3D G3DSA:3.30.1840.10 113 311 7.4E-62 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 Pfam PF13090 Polyphosphate kinase C-terminal domain 334 680 1.4E-141 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 Gene3D G3DSA:1.20.58.310 9 112 5.5E-33 T 14-10-2018 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 PIRSF PIRSF015589 1 689 5.1E-238 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 Gene3D G3DSA:3.30.870.10 504 690 1.9E-74 T 14-10-2018 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 SUPERFAMILY SSF140356 6 109 1.7E-29 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 AMBLS11_03845 1f4ba6d310059e616461856ec6a04f21 690 SUPERFAMILY SSF143724 110 316 1.71E-56 T 14-10-2018 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 Pfam PF00890 FAD binding domain 9 405 2.3E-119 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 SUPERFAMILY SSF51905 4 436 4.76E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 Gene3D G3DSA:3.50.50.60 9 416 5.8E-171 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 Gene3D G3DSA:1.20.58.100 431 549 1.3E-37 T 14-10-2018 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 SUPERFAMILY SSF46977 454 590 2.22E-44 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 PIRSF PIRSF000171 1 582 2.8E-49 T 14-10-2018 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 Gene3D G3DSA:3.90.700.10 246 350 5.8E-171 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 Gene3D G3DSA:4.10.80.40 550 590 2.7E-22 T 14-10-2018 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 590 2.9E-239 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 590 2.8E-34 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 SUPERFAMILY SSF56425 236 356 1.79E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08900 a54056bed96039f8d1c86d8c04034816 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 590 4.4E-274 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_01475 a5de4cbb18b705091013fd0109b9c1d1 429 Pfam PF13102 Phage integrase SAM-like domain 76 171 1.2E-5 T 14-10-2018 IPR025269 Phage integrase SAM-like domain AMBLS11_01475 a5de4cbb18b705091013fd0109b9c1d1 429 Gene3D G3DSA:1.10.150.130 71 179 3.9E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_01475 a5de4cbb18b705091013fd0109b9c1d1 429 Pfam PF00589 Phage integrase family 212 376 3.9E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_01475 a5de4cbb18b705091013fd0109b9c1d1 429 Gene3D G3DSA:1.10.443.10 186 388 4.6E-24 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_01475 a5de4cbb18b705091013fd0109b9c1d1 429 SUPERFAMILY SSF56349 76 383 7.06E-33 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_08880 981f5492dc869ce3872e4776f566fc1f 140 Pfam PF11911 Protein of unknown function (DUF3429) 2 136 2.0E-25 T 14-10-2018 IPR021836 Protein of unknown function DUF3429 AMBLS11_06885 5e0103ef2694100d2f731b2390e18659 288 Gene3D G3DSA:3.30.230.10 1 165 1.8E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_06885 5e0103ef2694100d2f731b2390e18659 288 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 283 1.9E-86 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMBLS11_06885 5e0103ef2694100d2f731b2390e18659 288 Pfam PF08544 GHMP kinases C terminal 213 266 9.7E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain AMBLS11_06885 5e0103ef2694100d2f731b2390e18659 288 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 10 277 31.495 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMBLS11_06885 5e0103ef2694100d2f731b2390e18659 288 Gene3D G3DSA:3.30.70.890 167 285 8.1E-31 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMBLS11_06885 5e0103ef2694100d2f731b2390e18659 288 PIRSF PIRSF010376 9 285 1.4E-84 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMBLS11_06885 5e0103ef2694100d2f731b2390e18659 288 SUPERFAMILY SSF55060 168 282 2.78E-34 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMBLS11_06885 5e0103ef2694100d2f731b2390e18659 288 Pfam PF00288 GHMP kinases N terminal domain 94 150 5.3E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMBLS11_06885 5e0103ef2694100d2f731b2390e18659 288 SUPERFAMILY SSF54211 11 164 3.19E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_18670 56569661193940c28fe873e005c980fa 616 SUPERFAMILY SSF143975 3 420 1.57E-135 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_18670 56569661193940c28fe873e005c980fa 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_18670 56569661193940c28fe873e005c980fa 616 SUPERFAMILY SSF52016 421 611 2.82E-59 T 14-10-2018 AMBLS11_18670 56569661193940c28fe873e005c980fa 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_18670 56569661193940c28fe873e005c980fa 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 609 4.2E-258 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_18670 56569661193940c28fe873e005c980fa 616 Pfam PF00920 Dehydratase family 34 606 5.7E-219 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_18670 56569661193940c28fe873e005c980fa 616 Gene3D G3DSA:3.50.30.80 421 572 5.1E-53 T 14-10-2018 AMBLS11_18670 56569661193940c28fe873e005c980fa 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 609 45.063 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 SUPERFAMILY SSF100879 241 354 5.18E-25 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 SUPERFAMILY SSF56672 1 233 2.67E-92 T 14-10-2018 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 Hamap MF_01113 DNA polymerase IV [dinB]. 1 352 37.197 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 348 2.2E-9 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 Gene3D G3DSA:2.30.40.20 21 73 3.0E-62 T 14-10-2018 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 Gene3D G3DSA:3.30.70.270 4 164 3.0E-62 T 14-10-2018 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 Gene3D G3DSA:1.10.150.20 176 229 1.5E-17 T 14-10-2018 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 Pfam PF11798 IMS family HHH motif 166 197 1.1E-7 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 Pfam PF00817 impB/mucB/samB family 7 154 2.1E-48 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMBLS11_15900 fa6b421fce6fae052458d17291a67611 357 Gene3D G3DSA:3.30.1490.100 237 354 1.4E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMBLS11_05120 983ace396c264d2526f76a5809599488 673 Pfam PF02743 Cache domain 40 304 2.5E-28 T 14-10-2018 IPR033479 Double Cache domain 1 AMBLS11_05120 983ace396c264d2526f76a5809599488 673 SMART SM00283 411 672 2.6E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_05120 983ace396c264d2526f76a5809599488 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 639 6.2E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_05120 983ace396c264d2526f76a5809599488 673 Pfam PF00672 HAMP domain 344 393 4.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_05120 983ace396c264d2526f76a5809599488 673 Gene3D G3DSA:3.30.450.20 173 323 6.7E-21 T 14-10-2018 AMBLS11_05120 983ace396c264d2526f76a5809599488 673 SMART SM00304 342 396 1.4E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_05120 983ace396c264d2526f76a5809599488 673 SUPERFAMILY SSF58104 364 673 2.09E-75 T 14-10-2018 AMBLS11_05120 983ace396c264d2526f76a5809599488 673 Gene3D G3DSA:1.10.287.950 341 673 2.2E-75 T 14-10-2018 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.3E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.3E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.3E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 PIRSF PIRSF002144 1 91 1.8E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 Pfam PF00203 Ribosomal protein S19 3 83 6.9E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 SUPERFAMILY SSF54570 3 83 9.94E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.461 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 3.0E-45 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 Gene3D G3DSA:3.30.860.10 1 91 9.1E-42 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01740 d2351d151089aa42144cc3ecb7ebdb0e 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 SUPERFAMILY SSF48113 451 756 2.65E-102 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 Gene3D G3DSA:1.10.420.20 214 418 7.9E-197 T 14-10-2018 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 Gene3D G3DSA:1.10.420.10 609 732 2.1E-136 T 14-10-2018 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 SUPERFAMILY SSF48113 47 450 6.19E-139 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 277 287 - T 14-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 ProSitePatterns PS00436 Peroxidases active site signature. 114 125 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 Gene3D G3DSA:1.10.520.10 46 451 7.9E-197 T 14-10-2018 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 Pfam PF00141 Peroxidase 108 416 1.0E-47 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 Pfam PF00141 Peroxidase 424 730 1.1E-35 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 Gene3D G3DSA:1.10.520.10 454 756 2.1E-136 T 14-10-2018 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 42 757 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 76 89 3.2E-40 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 285 308 3.2E-40 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 501 527 3.2E-40 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 50 72 3.2E-40 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 91 116 3.2E-40 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00458 Haem peroxidase superfamily signature 174 191 1.2E-14 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00458 Haem peroxidase superfamily signature 337 352 1.2E-14 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00458 Haem peroxidase superfamily signature 192 204 1.2E-14 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00458 Haem peroxidase superfamily signature 277 292 1.2E-14 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 PRINTS PR00458 Haem peroxidase superfamily signature 114 128 1.2E-14 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMBLS11_15435 1298be3f5c27c3986d8817c6709447a1 766 Hamap MF_01961 Catalase-peroxidase [katG]. 27 757 39.771 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMBLS11_08555 32d03ff15ad416851e939346e1b25cb6 137 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 5.3E-38 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMBLS11_08555 32d03ff15ad416851e939346e1b25cb6 137 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 5.3E-38 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMBLS11_08555 32d03ff15ad416851e939346e1b25cb6 137 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 5.3E-38 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMBLS11_08555 32d03ff15ad416851e939346e1b25cb6 137 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 5.3E-38 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMBLS11_08555 32d03ff15ad416851e939346e1b25cb6 137 Pfam PF03840 Preprotein translocase SecG subunit 5 73 1.2E-21 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMBLS11_08555 32d03ff15ad416851e939346e1b25cb6 137 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 74 1.1E-25 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMBLS11_15460 045f64526a691ff691638062a9253da8 326 SUPERFAMILY SSF46785 3 85 1.33E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_15460 045f64526a691ff691638062a9253da8 326 Gene3D G3DSA:1.10.10.10 1 92 3.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15460 045f64526a691ff691638062a9253da8 326 SUPERFAMILY SSF53850 89 304 1.39E-23 T 14-10-2018 AMBLS11_15460 045f64526a691ff691638062a9253da8 326 Pfam PF03466 LysR substrate binding domain 87 300 5.0E-22 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_15460 045f64526a691ff691638062a9253da8 326 Gene3D G3DSA:3.40.190.10 165 275 5.0E-24 T 14-10-2018 AMBLS11_15460 045f64526a691ff691638062a9253da8 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_15460 045f64526a691ff691638062a9253da8 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_15460 045f64526a691ff691638062a9253da8 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_15460 045f64526a691ff691638062a9253da8 326 Gene3D G3DSA:3.40.190.10 93 284 5.0E-24 T 14-10-2018 AMBLS11_15460 045f64526a691ff691638062a9253da8 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Gene3D G3DSA:3.30.65.10 706 752 1.2E-5 T 14-10-2018 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Gene3D G3DSA:3.30.65.10 753 815 3.7E-31 T 14-10-2018 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 SUPERFAMILY SSF57783 752 815 2.89E-19 T 14-10-2018 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 717 752 3.2E-10 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 630 1.6E-5 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Pfam PF01751 Toprim domain 5 149 2.3E-32 T 14-10-2018 IPR006171 TOPRIM domain AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 643 4.0E-254 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 SMART SM00436 140 228 1.3E-47 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Gene3D G3DSA:1.10.460.10 172 579 2.9E-165 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 SMART SM00493 3 139 7.1E-34 T 14-10-2018 IPR006171 TOPRIM domain AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 740 55.769 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 1.7E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 1.7E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 1.7E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 1.7E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 498 512 1.7E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Pfam PF01131 DNA topoisomerase 164 572 5.3E-133 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Gene3D G3DSA:1.10.290.10 287 411 2.9E-165 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Pfam PF08272 Topoisomerase I zinc-ribbon-like 832 872 5.1E-22 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Pfam PF08272 Topoisomerase I zinc-ribbon-like 766 801 2.5E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 SUPERFAMILY SSF57783 817 872 1.51E-20 T 14-10-2018 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 SUPERFAMILY SSF57783 596 630 1.45E-6 T 14-10-2018 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Gene3D G3DSA:3.40.50.140 1 170 2.7E-65 T 14-10-2018 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Gene3D G3DSA:2.70.20.10 220 481 2.9E-165 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 SUPERFAMILY SSF56712 3 616 3.4E-203 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 Gene3D G3DSA:2.20.25.10 816 875 4.0E-28 T 14-10-2018 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 SUPERFAMILY SSF57783 708 751 2.72E-6 T 14-10-2018 AMBLS11_07800 7d8dfbfacf07bec8f9d4c40c1b40b05b 884 SMART SM00437 279 535 5.8E-121 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 SUPERFAMILY SSF81271 389 455 1.09E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 SUPERFAMILY SSF55021 653 724 4.23E-11 T 14-10-2018 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 Pfam PF13328 HD domain 45 183 5.5E-36 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 SUPERFAMILY SSF109604 46 199 2.79E-41 T 14-10-2018 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 Pfam PF13291 ACT domain 648 724 1.5E-18 T 14-10-2018 IPR002912 ACT domain AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 Gene3D G3DSA:3.30.460.10 201 333 1.2E-47 T 14-10-2018 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 Gene3D G3DSA:3.10.20.30 390 463 3.8E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 Gene3D G3DSA:3.30.70.260 648 727 1.1E-16 T 14-10-2018 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 Pfam PF02824 TGS domain 396 455 1.1E-20 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 SMART SM00954 243 353 3.6E-63 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 SUPERFAMILY SSF81301 188 400 2.94E-62 T 14-10-2018 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 Pfam PF04607 Region found in RelA / SpoT proteins 243 352 3.7E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 Gene3D G3DSA:1.10.3210.10 46 199 1.2E-38 T 14-10-2018 AMBLS11_03420 2f6351f4cb02791f55508c38e7c3ef64 727 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 50 724 1.4E-183 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 AMBLS11_17520 31f18bb8c15e1e4cce5d853eeac25f04 420 Pfam PF07690 Major Facilitator Superfamily 31 356 1.3E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_17520 31f18bb8c15e1e4cce5d853eeac25f04 420 Gene3D G3DSA:1.20.1250.20 20 223 1.0E-54 T 14-10-2018 AMBLS11_17520 31f18bb8c15e1e4cce5d853eeac25f04 420 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 105 405 9.1E-112 T 14-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 AMBLS11_17520 31f18bb8c15e1e4cce5d853eeac25f04 420 SUPERFAMILY SSF103473 19 406 1.57E-36 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_17520 31f18bb8c15e1e4cce5d853eeac25f04 420 Gene3D G3DSA:1.20.1250.20 229 414 3.7E-58 T 14-10-2018 AMBLS11_18020 a0b85135a51a2c971e64f80fa40841fd 194 Gene3D G3DSA:3.40.50.1390 5 127 1.2E-45 T 14-10-2018 AMBLS11_18020 a0b85135a51a2c971e64f80fa40841fd 194 SUPERFAMILY SSF53041 5 138 5.89E-44 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AMBLS11_18020 a0b85135a51a2c971e64f80fa40841fd 194 SMART SM00857 5 139 3.9E-56 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMBLS11_18020 a0b85135a51a2c971e64f80fa40841fd 194 Gene3D G3DSA:1.10.10.60 139 181 2.9E-13 T 14-10-2018 AMBLS11_18020 a0b85135a51a2c971e64f80fa40841fd 194 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMBLS11_18020 a0b85135a51a2c971e64f80fa40841fd 194 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMBLS11_18020 a0b85135a51a2c971e64f80fa40841fd 194 SUPERFAMILY SSF46689 141 181 8.36E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_18020 a0b85135a51a2c971e64f80fa40841fd 194 Pfam PF02796 Helix-turn-helix domain of resolvase 141 178 1.1E-5 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AMBLS11_18020 a0b85135a51a2c971e64f80fa40841fd 194 Pfam PF00239 Resolvase, N terminal domain 6 138 9.8E-45 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Gene3D G3DSA:3.30.450.20 513 619 8.0E-21 T 14-10-2018 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Gene3D G3DSA:3.30.450.20 20 132 3.5E-16 T 14-10-2018 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 731 886 9.2E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SUPERFAMILY SSF55785 516 617 8.03E-27 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Gene3D G3DSA:3.30.450.20 133 260 2.8E-26 T 14-10-2018 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Gene3D G3DSA:3.30.450.20 261 385 1.3E-24 T 14-10-2018 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Gene3D G3DSA:3.30.450.20 386 511 6.1E-24 T 14-10-2018 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 769 796 2.0E-55 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 692 721 2.0E-55 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 846 875 2.0E-55 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 798 827 2.0E-55 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SUPERFAMILY SSF55785 271 373 4.36E-25 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Pfam PF08447 PAS fold 406 491 1.8E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Pfam PF08447 PAS fold 286 369 6.2E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Pfam PF08447 PAS fold 163 247 9.8E-18 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Pfam PF08447 PAS fold 529 613 8.0E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 269 377 1.3E-17 T 14-10-2018 IPR000014 PAS domain AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 515 625 1.5E-14 T 14-10-2018 IPR000014 PAS domain AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 257 1.3E-15 T 14-10-2018 IPR000014 PAS domain AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 391 499 2.6E-17 T 14-10-2018 IPR000014 PAS domain AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SUPERFAMILY SSF55785 393 499 2.09E-25 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SUPERFAMILY SSF55785 151 256 7.5E-26 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SUPERFAMILY SSF58104 638 919 1.96E-73 T 14-10-2018 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00086 578 620 0.012 T 14-10-2018 IPR001610 PAC motif AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00086 334 376 2.0E-8 T 14-10-2018 IPR001610 PAC motif AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00086 456 498 3.0E-5 T 14-10-2018 IPR001610 PAC motif AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00086 212 254 1.3E-6 T 14-10-2018 IPR001610 PAC motif AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00283 671 918 2.0E-91 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00091 20 86 250.0 T 14-10-2018 IPR000014 PAS domain AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00091 503 573 0.81 T 14-10-2018 IPR000014 PAS domain AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00091 376 451 3.3 T 14-10-2018 IPR000014 PAS domain AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00091 259 329 7.8 T 14-10-2018 IPR000014 PAS domain AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 SMART SM00091 137 207 11.0 T 14-10-2018 IPR000014 PAS domain AMBLS11_01560 f0265562ec6ab760565c8001b13dda75 969 Gene3D G3DSA:1.10.287.950 620 920 1.2E-85 T 14-10-2018 AMBLS11_17140 f5e105f5650fcbd890de95627778b7ee 227 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 51 226 1.3E-72 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMBLS11_17140 f5e105f5650fcbd890de95627778b7ee 227 Gene3D G3DSA:1.10.286.10 11 97 3.3E-32 T 14-10-2018 AMBLS11_17140 f5e105f5650fcbd890de95627778b7ee 227 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 47 227 30.058 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMBLS11_17140 f5e105f5650fcbd890de95627778b7ee 227 Gene3D G3DSA:3.30.1130.10 98 227 4.9E-47 T 14-10-2018 AMBLS11_17140 f5e105f5650fcbd890de95627778b7ee 227 SUPERFAMILY SSF55620 23 226 2.82E-69 T 14-10-2018 AMBLS11_17140 f5e105f5650fcbd890de95627778b7ee 227 Pfam PF01227 GTP cyclohydrolase I 51 226 3.4E-58 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMBLS11_17140 f5e105f5650fcbd890de95627778b7ee 227 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 157 167 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMBLS11_09265 b356722f6b19475a98f1313b32c59e58 429 Pfam PF02646 RmuC family 120 416 4.1E-105 T 14-10-2018 IPR003798 DNA recombination RmuC AMBLS11_04160 5abf0ff33a4cacd5b365b8f6abcd44de 170 SMART SM00091 12 78 0.0015 T 14-10-2018 IPR000014 PAS domain AMBLS11_04160 5abf0ff33a4cacd5b365b8f6abcd44de 170 Pfam PF08448 PAS fold 21 138 1.0E-6 T 14-10-2018 IPR013656 PAS fold-4 AMBLS11_04160 5abf0ff33a4cacd5b365b8f6abcd44de 170 SUPERFAMILY SSF55785 16 125 7.68E-10 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_04160 5abf0ff33a4cacd5b365b8f6abcd44de 170 Gene3D G3DSA:3.30.450.20 3 140 7.1E-33 T 14-10-2018 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 Pfam PF01590 GAF domain 28 154 2.0E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 Gene3D G3DSA:3.40.50.2300 417 542 8.3E-30 T 14-10-2018 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 340 2.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 2.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 354 2.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 2.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 Gene3D G3DSA:1.10.287.130 159 243 6.0E-21 T 14-10-2018 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 Gene3D G3DSA:3.30.565.10 244 402 5.3E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 SUPERFAMILY SSF55781 28 169 2.32E-25 T 14-10-2018 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 SUPERFAMILY SSF47384 158 244 4.9E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 SMART SM00388 173 242 2.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 SUPERFAMILY SSF55874 231 397 1.83E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 398 2.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 SUPERFAMILY SSF52172 422 538 1.14E-29 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 Gene3D G3DSA:3.30.450.40 12 158 4.9E-13 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 SMART SM00387 289 399 2.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 Pfam PF00072 Response regulator receiver domain 425 533 3.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 Pfam PF00512 His Kinase A (phospho-acceptor) domain 174 242 1.1E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 SMART SM00448 423 533 4.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13860 f65d6e787c2858ef70bc866acb5f6c42 542 SMART SM00065 26 168 1.6E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_08350 44e63f3249e88eb661f9acb0cf8e3a1c 369 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 10 364 7.8E-154 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMBLS11_08350 44e63f3249e88eb661f9acb0cf8e3a1c 369 Gene3D G3DSA:2.30.30.280 217 285 1.4E-25 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMBLS11_08350 44e63f3249e88eb661f9acb0cf8e3a1c 369 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 10 365 40.716 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMBLS11_08350 44e63f3249e88eb661f9acb0cf8e3a1c 369 Gene3D G3DSA:2.40.30.10 286 368 4.3E-32 T 14-10-2018 AMBLS11_08350 44e63f3249e88eb661f9acb0cf8e3a1c 369 Pfam PF03054 tRNA methyl transferase 10 364 1.1E-142 T 14-10-2018 AMBLS11_08350 44e63f3249e88eb661f9acb0cf8e3a1c 369 SUPERFAMILY SSF52402 9 248 4.85E-55 T 14-10-2018 AMBLS11_08350 44e63f3249e88eb661f9acb0cf8e3a1c 369 Gene3D G3DSA:3.40.50.620 2 216 6.7E-96 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_15335 9407167cd49c702c298e2e39ee2e0d50 291 Gene3D G3DSA:3.40.50.720 1 161 8.0E-57 T 14-10-2018 AMBLS11_15335 9407167cd49c702c298e2e39ee2e0d50 291 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 289 7.4E-123 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AMBLS11_15335 9407167cd49c702c298e2e39ee2e0d50 291 SUPERFAMILY SSF51735 3 161 2.99E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15335 9407167cd49c702c298e2e39ee2e0d50 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 160 3.2E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMBLS11_15335 9407167cd49c702c298e2e39ee2e0d50 291 Gene3D G3DSA:1.10.1040.10 162 291 6.3E-40 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMBLS11_15335 9407167cd49c702c298e2e39ee2e0d50 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMBLS11_15335 9407167cd49c702c298e2e39ee2e0d50 291 PIRSF PIRSF000103 1 291 3.0E-80 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMBLS11_15335 9407167cd49c702c298e2e39ee2e0d50 291 SUPERFAMILY SSF48179 161 290 1.25E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_15335 9407167cd49c702c298e2e39ee2e0d50 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 289 4.3E-36 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 Gene3D G3DSA:3.30.70.1430 572 669 1.6E-280 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 SUPERFAMILY SSF82714 724 806 1.96E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 SUPERFAMILY SSF82866 809 1032 1.07E-40 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 Gene3D G3DSA:3.30.70.1320 133 333 1.6E-280 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 SUPERFAMILY SSF82693 38 124 2.88E-18 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 SUPERFAMILY SSF82693 135 331 9.24E-21 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 3.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 3.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 3.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 3.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 3.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.4E-86 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 Gene3D G3DSA:1.20.1640.10 8 517 1.6E-280 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 4.9E-280 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 SUPERFAMILY SSF82714 183 273 1.2E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 Gene3D G3DSA:3.30.70.1440 670 868 1.6E-280 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 SUPERFAMILY SSF82693 570 672 2.62E-20 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 Gene3D G3DSA:3.30.2090.10 179 276 1.6E-280 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 Gene3D G3DSA:3.30.70.1430 38 819 1.6E-280 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 Gene3D G3DSA:3.30.2090.10 723 811 1.6E-280 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 Gene3D G3DSA:1.20.1640.10 518 1025 1.6E-280 T 14-10-2018 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1036 1.9E-293 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AMBLS11_03820 ebaae9db1e0f0e8afedb6dab4746c022 1061 SUPERFAMILY SSF82866 298 499 3.14E-47 T 14-10-2018 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 SUPERFAMILY SSF68912 1 46 4.71E-13 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 3.3E-218 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.0E-19 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 SMART SM00382 170 355 7.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 Gene3D G3DSA:3.40.50.300 130 417 4.0E-132 T 14-10-2018 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 Gene3D G3DSA:2.40.50.140 48 117 2.5E-34 T 14-10-2018 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.4E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 SMART SM00357 52 118 8.5E-17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 SUPERFAMILY SSF52540 90 371 2.71E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 SMART SM00959 5 47 6.6E-20 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.3E-31 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.981 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 SUPERFAMILY SSF50249 48 125 9.71E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_02325 a655c9802546db85390a404fb5655f73 421 Gene3D G3DSA:1.10.720.10 1 47 7.3E-24 T 14-10-2018 AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 349 357 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 Pfam PF00232 Glycosyl hydrolase family 1 12 442 4.4E-142 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 349 357 1.8E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 1.8E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 369 380 1.8E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 426 1.8E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 407 1.8E-23 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 SUPERFAMILY SSF51445 13 443 5.74E-150 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 Gene3D G3DSA:3.20.20.80 4 445 4.0E-156 T 14-10-2018 AMBLS11_17525 58a7f2531a70362063d46de8b22618f3 452 TIGRFAM TIGR03356 BGL: beta-galactosidase 14 436 7.3E-176 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 Gene3D G3DSA:3.40.50.10380 13 266 6.3E-114 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 SUPERFAMILY SSF51735 269 559 1.31E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 PIRSF PIRSF000106 2 560 3.1E-215 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 SMART SM00919 269 528 7.4E-108 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 PRINTS PR00072 Malic enzyme signature 296 312 4.0E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 PRINTS PR00072 Malic enzyme signature 181 203 4.0E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 PRINTS PR00072 Malic enzyme signature 240 258 4.0E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 PRINTS PR00072 Malic enzyme signature 85 109 4.0E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 PRINTS PR00072 Malic enzyme signature 265 281 4.0E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 PRINTS PR00072 Malic enzyme signature 405 421 4.0E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 PRINTS PR00072 Malic enzyme signature 145 174 4.0E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 SUPERFAMILY SSF53223 3 268 1.51E-107 T 14-10-2018 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 Pfam PF00390 Malic enzyme, N-terminal domain 79 259 9.4E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 SMART SM01274 79 259 1.3E-105 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 Gene3D G3DSA:3.40.50.720 267 561 7.1E-97 T 14-10-2018 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 ProSitePatterns PS00331 Malic enzymes signature. 265 281 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMBLS11_04100 1144dd1ba6f4b402d9eafea9de56c0be 562 Pfam PF03949 Malic enzyme, NAD binding domain 269 528 2.6E-92 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 8.9E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 8.9E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 8.9E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 8.9E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 8.9E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Gene3D G3DSA:3.40.50.800 532 638 7.7E-31 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Pfam PF03129 Anticodon binding domain 541 630 1.8E-22 T 14-10-2018 IPR004154 Anticodon-binding AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 528 1.0E-47 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 SMART SM00863 170 219 2.4E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 8.0E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 SUPERFAMILY SSF55186 63 241 1.44E-65 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 SUPERFAMILY SSF81271 3 61 3.27E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 4.9E-243 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Gene3D G3DSA:3.10.20.30 3 62 7.2E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Pfam PF02824 TGS domain 4 61 6.8E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.528 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Gene3D G3DSA:3.30.930.10 223 531 5.0E-130 T 14-10-2018 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Gene3D G3DSA:3.30.980.10 69 222 7.5E-64 T 14-10-2018 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 Gene3D G3DSA:3.30.54.20 130 187 7.5E-64 T 14-10-2018 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 SUPERFAMILY SSF52954 530 632 5.29E-31 T 14-10-2018 AMBLS11_07310 4d3cc61cb8f7bcd0ddf89f0f8bcd9945 638 SUPERFAMILY SSF55681 243 525 2.59E-98 T 14-10-2018 AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 261 3.9E-13 T 14-10-2018 IPR000014 PAS domain AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 294 460 3.8E-40 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 SUPERFAMILY SSF55073 303 459 1.02E-37 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 Gene3D G3DSA:3.30.450.20 4 129 1.2E-10 T 14-10-2018 AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 Pfam PF00990 Diguanylate cyclase, GGDEF domain 298 457 7.3E-40 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 Gene3D G3DSA:3.30.70.270 287 459 5.2E-47 T 14-10-2018 AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 Pfam PF13188 PAS domain 9 52 2.2E-4 T 14-10-2018 IPR000014 PAS domain AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 SMART SM00091 6 78 0.064 T 14-10-2018 IPR000014 PAS domain AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 SMART SM00091 134 209 36.0 T 14-10-2018 IPR000014 PAS domain AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 SMART SM00267 287 461 2.5E-43 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 SMART SM00086 213 255 1.6E-4 T 14-10-2018 IPR001610 PAC motif AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 SUPERFAMILY SSF55785 9 128 7.15E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 Gene3D G3DSA:3.30.450.20 131 286 3.0E-32 T 14-10-2018 AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 SUPERFAMILY SSF55785 160 252 2.97E-20 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_14885 35cce2e821cc2fa0998d246e6d39e506 491 Pfam PF13426 PAS domain 162 254 1.8E-15 T 14-10-2018 IPR000014 PAS domain AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 Gene3D G3DSA:3.30.390.30 352 471 1.6E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 9 473 63.879 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 SUPERFAMILY SSF51905 11 330 3.7E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 SUPERFAMILY SSF55424 352 470 3.78E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 Gene3D G3DSA:3.50.50.60 14 339 2.2E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 5.1E-51 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 5.1E-51 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 5.1E-51 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 5.1E-51 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 5.1E-51 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 5.1E-51 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 439 459 5.1E-51 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 48 63 5.1E-51 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 5.1E-51 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PIRSF PIRSF000350 1 470 3.0E-70 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 Gene3D G3DSA:3.50.50.60 165 283 2.2E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 464 7.3E-30 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 2.1E-25 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.1E-25 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 2.1E-25 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 2.1E-25 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 2.1E-25 T 14-10-2018 AMBLS11_15540 ae89af359f342e685c4effd5ed7ac8ff 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 333 6.8E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_08070 12a35a9552044f5f79c91d950cad0af8 152 Pfam PF02576 RimP N-terminal domain 11 83 8.7E-32 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AMBLS11_08070 12a35a9552044f5f79c91d950cad0af8 152 SUPERFAMILY SSF74942 84 151 5.49E-16 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AMBLS11_08070 12a35a9552044f5f79c91d950cad0af8 152 Gene3D G3DSA:3.30.300.70 1 80 6.2E-30 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily AMBLS11_08070 12a35a9552044f5f79c91d950cad0af8 152 SUPERFAMILY SSF75420 3 83 3.4E-28 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily AMBLS11_08070 12a35a9552044f5f79c91d950cad0af8 152 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.8E-14 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AMBLS11_08070 12a35a9552044f5f79c91d950cad0af8 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 25.016 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AMBLS11_02125 f4d9d3a6cd594cd1004b8152d6968898 252 SMART SM00448 23 134 1.9E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02125 f4d9d3a6cd594cd1004b8152d6968898 252 Gene3D G3DSA:1.10.10.10 148 252 1.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_02125 f4d9d3a6cd594cd1004b8152d6968898 252 Gene3D G3DSA:3.40.50.2300 8 143 2.1E-37 T 14-10-2018 AMBLS11_02125 f4d9d3a6cd594cd1004b8152d6968898 252 SMART SM00862 172 247 1.9E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_02125 f4d9d3a6cd594cd1004b8152d6968898 252 SUPERFAMILY SSF46894 152 248 3.4E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_02125 f4d9d3a6cd594cd1004b8152d6968898 252 Pfam PF00072 Response regulator receiver domain 25 135 1.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02125 f4d9d3a6cd594cd1004b8152d6968898 252 Pfam PF00486 Transcriptional regulatory protein, C terminal 174 247 1.1E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_02125 f4d9d3a6cd594cd1004b8152d6968898 252 SUPERFAMILY SSF52172 23 145 7.83E-42 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 8.6E-186 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 175 181 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 Gene3D G3DSA:3.30.360.10 175 476 5.7E-169 T 14-10-2018 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 490 86.068 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 185 3.6E-54 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 PIRSF PIRSF000110 1 492 3.0E-174 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 Gene3D G3DSA:3.40.50.720 12 438 5.7E-169 T 14-10-2018 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 SUPERFAMILY SSF51735 6 187 5.12E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 165 193 6.1E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 326 352 6.1E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 235 251 6.1E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 141 154 6.1E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 217 234 6.1E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 SUPERFAMILY SSF55347 175 489 1.01E-114 T 14-10-2018 AMBLS11_11040 f3ac15f74d43569bae10007d6355bdd9 497 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 2.2E-118 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMBLS11_01720 a77994e8bd89724e4c296e05af55a0c0 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site AMBLS11_01720 a77994e8bd89724e4c296e05af55a0c0 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 2.2E-90 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_01720 a77994e8bd89724e4c296e05af55a0c0 212 Gene3D G3DSA:2.40.30.10 133 212 1.5E-17 T 14-10-2018 AMBLS11_01720 a77994e8bd89724e4c296e05af55a0c0 212 Pfam PF00297 Ribosomal protein L3 46 185 1.4E-15 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01720 a77994e8bd89724e4c296e05af55a0c0 212 Gene3D G3DSA:2.40.50.620 33 99 2.6E-16 T 14-10-2018 AMBLS11_01720 a77994e8bd89724e4c296e05af55a0c0 212 SUPERFAMILY SSF50447 2 211 2.12E-81 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_01720 a77994e8bd89724e4c296e05af55a0c0 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 40.208 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_08400 a797ab95a0297bab44a4883b1c2e1917 149 Pfam PF04217 Protein of unknown function, DUF412 6 144 4.9E-57 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 AMBLS11_18975 aa714910e5d41a753390ee082fe07fd0 264 PIRSF PIRSF009320 98 263 2.9E-8 T 14-10-2018 AMBLS11_18975 aa714910e5d41a753390ee082fe07fd0 264 PIRSF PIRSF009320 2 96 6.0E-15 T 14-10-2018 AMBLS11_18975 aa714910e5d41a753390ee082fe07fd0 264 Gene3D G3DSA:3.40.50.300 1 262 5.1E-77 T 14-10-2018 AMBLS11_18975 aa714910e5d41a753390ee082fe07fd0 264 SUPERFAMILY SSF52540 2 258 9.7E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_18975 aa714910e5d41a753390ee082fe07fd0 264 Pfam PF13614 AAA domain 3 178 2.6E-63 T 14-10-2018 IPR025669 AAA domain AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 SMART SM00283 259 520 2.3E-63 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 Gene3D G3DSA:3.30.450.20 4 116 2.2E-24 T 14-10-2018 AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 Gene3D G3DSA:1.10.287.950 234 524 6.5E-62 T 14-10-2018 AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 SUPERFAMILY SSF58104 265 521 6.02E-62 T 14-10-2018 AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 1.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 1.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.0E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 SUPERFAMILY SSF55785 20 112 7.5E-26 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 Pfam PF08447 PAS fold 32 108 2.0E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 107 1.3E-14 T 14-10-2018 IPR000014 PAS domain AMBLS11_17460 225966aa6673a5c8fc611d41f047ebae 527 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 485 5.3E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_09670 232a9be0824ba66fe1b6cab7578f2359 1133 SUPERFAMILY SSF53335 79 597 9.02E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_09670 232a9be0824ba66fe1b6cab7578f2359 1133 Pfam PF02384 N-6 DNA Methylase 429 594 5.3E-9 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMBLS11_09670 232a9be0824ba66fe1b6cab7578f2359 1133 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 505 529 5.6E-7 T 14-10-2018 AMBLS11_09670 232a9be0824ba66fe1b6cab7578f2359 1133 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 298 312 5.6E-7 T 14-10-2018 AMBLS11_09670 232a9be0824ba66fe1b6cab7578f2359 1133 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 472 484 5.6E-7 T 14-10-2018 AMBLS11_06445 dd6c58a853cbd92b3bb2b1e8ef055cf4 53 Pfam PF06945 Protein of unknown function (DUF1289) 5 48 8.8E-20 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 AMBLS11_05285 1a3f409e22ec49d0af531fd15168b885 981 Pfam PF00593 TonB dependent receptor 367 980 5.8E-14 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_05285 1a3f409e22ec49d0af531fd15168b885 981 Gene3D G3DSA:2.60.40.1120 32 120 3.0E-12 T 14-10-2018 AMBLS11_05285 1a3f409e22ec49d0af531fd15168b885 981 Gene3D G3DSA:2.170.130.10 121 235 4.6E-5 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_05285 1a3f409e22ec49d0af531fd15168b885 981 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 232 4.8E-5 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_05285 1a3f409e22ec49d0af531fd15168b885 981 SUPERFAMILY SSF56935 113 981 1.83E-70 T 14-10-2018 AMBLS11_05285 1a3f409e22ec49d0af531fd15168b885 981 SUPERFAMILY SSF49452 26 111 7.06E-12 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMBLS11_05285 1a3f409e22ec49d0af531fd15168b885 981 Pfam PF13620 Carboxypeptidase regulatory-like domain 31 111 2.8E-18 T 14-10-2018 AMBLS11_04890 4e73d4fec12df2efbd80160fbde311a1 332 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 8.1E-102 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMBLS11_04890 4e73d4fec12df2efbd80160fbde311a1 332 Gene3D G3DSA:3.90.25.30 167 315 1.8E-130 T 14-10-2018 AMBLS11_04890 4e73d4fec12df2efbd80160fbde311a1 332 SUPERFAMILY SSF51735 1 258 4.33E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04890 4e73d4fec12df2efbd80160fbde311a1 332 Gene3D G3DSA:3.40.50.720 5 311 1.8E-130 T 14-10-2018 AMBLS11_04890 4e73d4fec12df2efbd80160fbde311a1 332 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 4.4E-166 T 14-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 AMBLS11_13175 cf97b7f408464af90c3847f2fac340c7 359 SUPERFAMILY SSF55729 175 330 5.83E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_13175 cf97b7f408464af90c3847f2fac340c7 359 Gene3D G3DSA:3.40.630.30 164 325 1.9E-6 T 14-10-2018 AMBLS11_13175 cf97b7f408464af90c3847f2fac340c7 359 Pfam PF13480 Acetyltransferase (GNAT) domain 175 320 4.3E-22 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AMBLS11_00360 eae939c8315b8ee73fb061e3000b61f4 743 Pfam PF04411 PD-(D/E)XK nuclease superfamily 382 533 1.2E-42 T 14-10-2018 IPR007505 PD-(D/E)XK nuclease superfamily 7 AMBLS11_00360 eae939c8315b8ee73fb061e3000b61f4 743 Pfam PF09823 Domain of unknown function (DUF2357) 111 359 5.7E-59 T 14-10-2018 IPR018633 Domain of unknown function DUF2357 AMBLS11_16605 0f7db1b861b33e836ffb304733f04e3d 435 SUPERFAMILY SSF109604 196 373 7.85E-5 T 14-10-2018 AMBLS11_16605 0f7db1b861b33e836ffb304733f04e3d 435 SMART SM00448 12 124 2.1E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16605 0f7db1b861b33e836ffb304733f04e3d 435 Pfam PF13487 HD domain 251 311 7.4E-7 T 14-10-2018 AMBLS11_16605 0f7db1b861b33e836ffb304733f04e3d 435 Gene3D G3DSA:3.40.50.2300 3 151 3.0E-32 T 14-10-2018 AMBLS11_16605 0f7db1b861b33e836ffb304733f04e3d 435 Pfam PF00072 Response regulator receiver domain 14 124 7.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16605 0f7db1b861b33e836ffb304733f04e3d 435 SUPERFAMILY SSF52172 11 178 6.83E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_16605 0f7db1b861b33e836ffb304733f04e3d 435 Gene3D G3DSA:1.10.3210.10 173 365 1.7E-23 T 14-10-2018 AMBLS11_05670 822487defcce7bab018f3e70a89fae76 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 2.5E-21 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMBLS11_05670 822487defcce7bab018f3e70a89fae76 131 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AMBLS11_05670 822487defcce7bab018f3e70a89fae76 131 Gene3D G3DSA:3.10.180.10 1 130 5.5E-48 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_05670 822487defcce7bab018f3e70a89fae76 131 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AMBLS11_05670 822487defcce7bab018f3e70a89fae76 131 SUPERFAMILY SSF54593 1 127 4.16E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_05670 822487defcce7bab018f3e70a89fae76 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 129 8.9E-62 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AMBLS11_00495 056538088e3f42696be2affe35e4a30b 636 Gene3D G3DSA:3.20.20.540 216 527 3.7E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMBLS11_00495 056538088e3f42696be2affe35e4a30b 636 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 595 5.5E-220 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMBLS11_00495 056538088e3f42696be2affe35e4a30b 636 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.466 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMBLS11_00495 056538088e3f42696be2affe35e4a30b 636 Pfam PF13667 ThiC-associated domain 23 103 1.8E-29 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMBLS11_00495 056538088e3f42696be2affe35e4a30b 636 Pfam PF01964 Radical SAM ThiC family 144 592 2.0E-200 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMBLS11_13345 a7cd822dc46e295da2c95a9ac155a6cc 676 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 407 421 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AMBLS11_13345 a7cd822dc46e295da2c95a9ac155a6cc 676 Gene3D G3DSA:3.90.105.10 614 670 7.4E-17 T 14-10-2018 AMBLS11_13345 a7cd822dc46e295da2c95a9ac155a6cc 676 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 185 562 1.1E-87 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AMBLS11_13345 a7cd822dc46e295da2c95a9ac155a6cc 676 Gene3D G3DSA:3.40.640.10 185 464 1.8E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_13345 a7cd822dc46e295da2c95a9ac155a6cc 676 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 37 149 2.5E-7 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AMBLS11_13345 a7cd822dc46e295da2c95a9ac155a6cc 676 SUPERFAMILY SSF53383 185 574 5.57E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_13345 a7cd822dc46e295da2c95a9ac155a6cc 676 SUPERFAMILY SSF55904 534 673 4.32E-26 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AMBLS11_13345 a7cd822dc46e295da2c95a9ac155a6cc 676 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 612 661 1.1E-9 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AMBLS11_03455 7861b0831d16fbfbf2dfdac9a88bed23 223 Pfam PF14518 Iron-containing redox enzyme 39 206 1.3E-26 T 14-10-2018 AMBLS11_03455 7861b0831d16fbfbf2dfdac9a88bed23 223 SMART SM01236 73 170 1.6E-7 T 14-10-2018 AMBLS11_03455 7861b0831d16fbfbf2dfdac9a88bed23 223 SUPERFAMILY SSF48613 1 214 4.45E-65 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMBLS11_03455 7861b0831d16fbfbf2dfdac9a88bed23 223 Gene3D G3DSA:1.20.910.10 3 220 3.8E-59 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMBLS11_05015 15b65aaaafc3d20fda283bbf47844b00 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 255 2.9E-68 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AMBLS11_05015 15b65aaaafc3d20fda283bbf47844b00 259 Pfam PF01311 Bacterial export proteins, family 1 14 244 1.4E-63 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMBLS11_05015 15b65aaaafc3d20fda283bbf47844b00 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 2.2E-17 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMBLS11_05015 15b65aaaafc3d20fda283bbf47844b00 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.2E-17 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMBLS11_05015 15b65aaaafc3d20fda283bbf47844b00 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 2.2E-17 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMBLS11_05015 15b65aaaafc3d20fda283bbf47844b00 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.2E-17 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMBLS11_03515 9f199f32b0ccdd1d79d97de4892eea8f 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 9.8E-67 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_03515 9f199f32b0ccdd1d79d97de4892eea8f 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AMBLS11_03515 9f199f32b0ccdd1d79d97de4892eea8f 142 Pfam PF00572 Ribosomal protein L13 15 138 3.4E-59 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMBLS11_03515 9f199f32b0ccdd1d79d97de4892eea8f 142 PIRSF PIRSF002181 1 142 8.5E-53 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMBLS11_03515 9f199f32b0ccdd1d79d97de4892eea8f 142 SUPERFAMILY SSF52161 1 140 5.63E-62 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_03515 9f199f32b0ccdd1d79d97de4892eea8f 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.217 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMBLS11_03515 9f199f32b0ccdd1d79d97de4892eea8f 142 Gene3D G3DSA:3.90.1180.10 1 142 2.3E-66 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_04230 c1be997cfa3c235ac27740fe2567433d 201 SUPERFAMILY SSF52016 4 194 2.75E-56 T 14-10-2018 AMBLS11_04230 c1be997cfa3c235ac27740fe2567433d 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 5 188 4.3E-79 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AMBLS11_04230 c1be997cfa3c235ac27740fe2567433d 201 Pfam PF00694 Aconitase C-terminal domain 5 127 1.9E-34 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AMBLS11_04230 c1be997cfa3c235ac27740fe2567433d 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 3 201 41.416 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AMBLS11_04230 c1be997cfa3c235ac27740fe2567433d 201 Gene3D G3DSA:3.20.19.10 1 182 7.3E-75 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 Pfam PF14520 Helix-hairpin-helix domain 531 582 3.2E-7 T 14-10-2018 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 Pfam PF02151 UvrB/uvrC motif 183 216 3.8E-12 T 14-10-2018 IPR001943 UVR domain GO:0005515 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 Gene3D G3DSA:3.40.1440.10 1 80 1.6E-26 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 SUPERFAMILY SSF47781 481 583 3.18E-21 T 14-10-2018 IPR010994 RuvA domain 2-like AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 SMART SM00465 1 76 3.8E-14 T 14-10-2018 IPR000305 GIY-YIG endonuclease AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 SUPERFAMILY SSF46600 168 221 1.96E-14 T 14-10-2018 IPR036876 UVR domain superfamily AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 SUPERFAMILY SSF82771 1 78 3.92E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 581 26.674 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 Gene3D G3DSA:1.10.150.20 529 584 4.7E-22 T 14-10-2018 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 563 2.4E-204 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 SMART SM00278 562 581 2.6 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 SMART SM00278 530 549 3.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 Pfam PF01541 GIY-YIG catalytic domain 2 71 3.0E-7 T 14-10-2018 IPR000305 GIY-YIG endonuclease AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 361 516 2.6E-48 T 14-10-2018 IPR001162 UvrC family homology region AMBLS11_09705 4d6107b62eb18dd668c65d5db5fff1db 584 Gene3D G3DSA:3.30.420.340 354 526 6.6E-48 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 Pfam PF00890 FAD binding domain 20 398 3.2E-98 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 SUPERFAMILY SSF56425 244 358 2.69E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 Pfam PF02910 Fumarate reductase flavoprotein C-term 447 530 1.2E-14 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 SUPERFAMILY SSF51905 12 453 1.4E-69 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 Gene3D G3DSA:1.20.58.100 431 545 5.4E-44 T 14-10-2018 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 21 40 2.7E-8 T 14-10-2018 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 361 383 2.7E-8 T 14-10-2018 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 18 526 1.4E-205 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 SUPERFAMILY SSF46977 432 532 5.23E-31 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 20 42 7.4E-5 T 14-10-2018 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 383 7.4E-5 T 14-10-2018 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 PIRSF PIRSF000171 336 543 2.7E-11 T 14-10-2018 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 PIRSF PIRSF000171 10 328 2.1E-23 T 14-10-2018 AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 Gene3D G3DSA:3.50.50.60 20 410 4.2E-152 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_12550 5664dc3cf0d2be67d878bdb77880fa73 561 Gene3D G3DSA:3.90.700.10 254 364 4.2E-152 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 SUPERFAMILY SSF52540 361 564 2.27E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 Pfam PF00448 SRP54-type protein, GTPase domain 363 563 7.2E-78 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 Gene3D G3DSA:1.20.120.140 260 562 2.5E-116 T 14-10-2018 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 Gene3D G3DSA:3.40.50.300 356 552 2.5E-116 T 14-10-2018 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 SMART SM00962 363 564 3.4E-124 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 286 564 62.54 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 537 550 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 SMART SM00963 263 343 4.0E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 SMART SM00382 362 563 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 SUPERFAMILY SSF47364 258 336 5.36E-21 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 287 563 2.7E-114 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMBLS11_16785 0c85fe15f0e484e7ed2541705d7bfa90 571 Pfam PF02881 SRP54-type protein, helical bundle domain 274 339 2.3E-11 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 4.7E-45 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 Gene3D G3DSA:3.30.300.10 11 270 3.1E-178 T 14-10-2018 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 SUPERFAMILY SSF55973 4 109 7.85E-48 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 Gene3D G3DSA:3.30.300.10 5 233 3.1E-178 T 14-10-2018 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.727 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 SUPERFAMILY SSF55973 110 232 8.24E-53 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.2E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 5.3E-196 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 PIRSF PIRSF000497 1 381 8.9E-174 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 SUPERFAMILY SSF55973 233 379 2.75E-70 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.3E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMBLS11_03765 460f0f86c54926e9b28877771ec8f403 381 Gene3D G3DSA:3.30.300.10 103 372 3.1E-178 T 14-10-2018 AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 299 475 3.2E-66 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 SUPERFAMILY SSF51735 296 476 1.14E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 SUPERFAMILY SSF52096 4 290 4.21E-50 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 SUPERFAMILY SSF48179 480 623 3.91E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 Gene3D G3DSA:3.90.226.10 2 295 9.7E-68 T 14-10-2018 AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 SUPERFAMILY SSF48179 605 701 2.3E-20 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 480 573 3.4E-26 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 611 698 1.7E-7 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 Gene3D G3DSA:3.40.50.720 297 480 1.4E-69 T 14-10-2018 AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 194 2.7E-27 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMBLS11_07980 ac8d9b053f481e491ff1be47805304e3 707 Gene3D G3DSA:1.10.1040.50 482 705 5.2E-72 T 14-10-2018 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Pfam PF02142 MGS-like domain 956 1041 7.9E-17 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.455 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 3.0E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 3.2E-36 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Gene3D G3DSA:3.40.50.20 554 662 7.7E-50 T 14-10-2018 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.4E-39 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 SUPERFAMILY SSF48108 396 554 1.96E-51 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Gene3D G3DSA:3.40.50.20 1 116 1.2E-49 T 14-10-2018 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Gene3D G3DSA:3.30.470.20 665 935 1.1E-123 T 14-10-2018 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.3E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.3E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 SMART SM00851 955 1041 9.5E-29 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 SMART SM01096 424 547 1.8E-72 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Gene3D G3DSA:3.40.50.1380 936 1072 2.2E-36 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 SUPERFAMILY SSF52335 935 1070 2.09E-37 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 SUPERFAMILY SSF52440 1 127 4.03E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Gene3D G3DSA:1.10.1030.10 404 553 6.1E-49 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Gene3D G3DSA:3.30.470.20 119 403 2.2E-128 T 14-10-2018 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.156 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 SUPERFAMILY SSF56059 128 401 2.3E-108 T 14-10-2018 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 SUPERFAMILY SSF52440 556 675 1.31E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMBLS11_06710 e5bb8baabefe06fc06e85c9ddda35df4 1073 SUPERFAMILY SSF56059 673 932 7.07E-105 T 14-10-2018 AMBLS11_04360 c11566db59d04c4e8af30c03e34b1585 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 31.159 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AMBLS11_04360 c11566db59d04c4e8af30c03e34b1585 164 Gene3D G3DSA:2.40.50.140 30 141 1.0E-39 T 14-10-2018 AMBLS11_04360 c11566db59d04c4e8af30c03e34b1585 164 SUPERFAMILY SSF82093 30 141 4.71E-39 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 AMBLS11_04360 c11566db59d04c4e8af30c03e34b1585 164 Pfam PF03100 CcmE 4 135 2.0E-44 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 SUPERFAMILY SSF52440 21 113 5.85E-27 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 SUPERFAMILY SSF56059 113 317 1.94E-52 T 14-10-2018 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 Gene3D G3DSA:3.30.1490.20 128 197 3.3E-74 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 20 320 33.849 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 80 91 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 Gene3D G3DSA:3.40.50.20 7 101 1.9E-28 T 14-10-2018 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 262 290 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 Pfam PF01820 D-ala D-ala ligase N-terminus 21 103 9.8E-16 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 Gene3D G3DSA:3.30.470.20 102 314 3.3E-74 T 14-10-2018 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 PIRSF PIRSF039102 59 327 5.0E-83 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 PIRSF PIRSF039102 17 63 1.1E-7 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 21 318 2.0E-101 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14030 438295f7f813c8286afe9e64dc307853 327 Pfam PF07478 D-ala D-ala ligase C-terminus 120 316 5.4E-61 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_05220 d54d446051c0dfa03425a11e87b0a4ab 586 Gene3D G3DSA:3.90.76.10 42 212 5.5E-60 T 14-10-2018 AMBLS11_05220 d54d446051c0dfa03425a11e87b0a4ab 586 Gene3D G3DSA:3.10.105.10 339 556 2.6E-74 T 14-10-2018 AMBLS11_05220 d54d446051c0dfa03425a11e87b0a4ab 586 PIRSF PIRSF002741 3 582 2.2E-98 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMBLS11_05220 d54d446051c0dfa03425a11e87b0a4ab 586 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 502 1.2E-79 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain AMBLS11_05220 d54d446051c0dfa03425a11e87b0a4ab 586 SUPERFAMILY SSF53850 35 582 2.35E-135 T 14-10-2018 AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 Pfam PF00575 S1 RNA binding domain 646 717 5.7E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 Gene3D G3DSA:1.10.10.650 1 106 2.8E-41 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 Pfam PF12836 Helix-hairpin-helix motif 488 552 1.4E-26 T 14-10-2018 AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 SUPERFAMILY SSF53098 318 466 1.04E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 SUPERFAMILY SSF47781 467 553 7.34E-25 T 14-10-2018 IPR010994 RuvA domain 2-like AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 Gene3D G3DSA:1.10.3500.10 109 495 8.3E-155 T 14-10-2018 IPR023323 Tex-like domain superfamily AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 SMART SM00732 322 421 7.0E-36 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 SMART SM00316 646 717 1.9E-23 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 Pfam PF09371 Tex-like protein N-terminal domain 6 189 9.5E-69 T 14-10-2018 IPR018974 Tex-like protein, N-terminal AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 Gene3D G3DSA:2.40.50.140 628 722 1.8E-28 T 14-10-2018 AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 SUPERFAMILY SSF47781 558 629 9.78E-20 T 14-10-2018 IPR010994 RuvA domain 2-like AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 SUPERFAMILY SSF158832 2 317 3.53E-119 T 14-10-2018 AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 SUPERFAMILY SSF50249 634 719 1.34E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 Gene3D G3DSA:1.10.150.310 496 627 4.9E-48 T 14-10-2018 AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 Pfam PF16921 Tex protein YqgF-like domain 322 448 4.4E-53 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain AMBLS11_18400 186ba0eca26f7ab01f5d6ea56f8cf7b1 782 Gene3D G3DSA:3.30.420.140 321 448 8.3E-155 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AMBLS11_00220 43451885853392cd9a6de5043827d14a 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 399 1.5E-146 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AMBLS11_00220 43451885853392cd9a6de5043827d14a 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 193 375 1.9E-71 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMBLS11_00220 43451885853392cd9a6de5043827d14a 409 Gene3D G3DSA:3.40.50.10300 189 409 2.2E-80 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMBLS11_00220 43451885853392cd9a6de5043827d14a 409 Gene3D G3DSA:3.40.50.1950 1 188 1.2E-62 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMBLS11_00220 43451885853392cd9a6de5043827d14a 409 Pfam PF02441 Flavoprotein 6 178 1.8E-48 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AMBLS11_00220 43451885853392cd9a6de5043827d14a 409 SUPERFAMILY SSF102645 192 403 2.22E-77 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMBLS11_00220 43451885853392cd9a6de5043827d14a 409 SUPERFAMILY SSF52507 4 177 2.35E-62 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 SUPERFAMILY SSF55073 288 444 5.41E-31 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 SUPERFAMILY SSF55785 173 277 8.38E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 Gene3D G3DSA:3.30.70.270 281 455 7.0E-36 T 14-10-2018 AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 Pfam PF00563 EAL domain 458 692 1.9E-72 T 14-10-2018 IPR001633 EAL domain AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 284 438 5.2E-24 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 SUPERFAMILY SSF141868 457 703 1.57E-86 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 SMART SM00267 273 442 3.5E-24 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 Gene3D G3DSA:3.20.20.450 456 706 6.4E-94 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 Gene3D G3DSA:3.30.450.20 155 274 1.3E-6 T 14-10-2018 AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 SMART SM00052 452 697 1.1E-104 T 14-10-2018 IPR001633 EAL domain AMBLS11_15640 9733ce219159290680b6e819e652e5bd 706 Pfam PF00990 Diguanylate cyclase, GGDEF domain 285 437 7.2E-29 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_16440 0eaa2431a4e9e1bd8369f41ce43b702c 166 SUPERFAMILY SSF48295 34 115 1.57E-14 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_00085 0eaa2431a4e9e1bd8369f41ce43b702c 166 SUPERFAMILY SSF48295 34 115 1.57E-14 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_16180 45439c9ef795fa21be003169d45ecd72 344 Gene3D G3DSA:3.30.43.10 3 68 3.5E-15 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMBLS11_16180 45439c9ef795fa21be003169d45ecd72 344 Gene3D G3DSA:3.30.465.10 69 216 1.8E-53 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMBLS11_16180 45439c9ef795fa21be003169d45ecd72 344 Gene3D G3DSA:3.90.78.10 217 343 7.2E-40 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_16180 45439c9ef795fa21be003169d45ecd72 344 SUPERFAMILY SSF56194 200 338 1.31E-39 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_16180 45439c9ef795fa21be003169d45ecd72 344 Pfam PF01565 FAD binding domain 25 147 2.6E-18 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMBLS11_16180 45439c9ef795fa21be003169d45ecd72 344 SUPERFAMILY SSF56176 4 193 4.09E-40 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMBLS11_16180 45439c9ef795fa21be003169d45ecd72 344 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 344 72.594 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_16180 45439c9ef795fa21be003169d45ecd72 344 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 4 337 6.3E-73 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_16180 45439c9ef795fa21be003169d45ecd72 344 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 204 335 2.0E-31 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 Gene3D G3DSA:3.90.1210.10 740 793 1.3E-11 T 14-10-2018 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 SMART SM00858 734 792 3.9E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 Pfam PF03275 UDP-galactopyranose mutase 147 329 4.7E-7 T 14-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 SUPERFAMILY SSF51569 448 743 1.88E-87 T 14-10-2018 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 Pfam PF08666 SAF domain 741 791 8.2E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 SUPERFAMILY SSF51269 726 791 7.06E-12 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 Gene3D G3DSA:3.50.50.60 1 434 9.1E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 SUPERFAMILY SSF51971 7 423 4.36E-28 T 14-10-2018 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 Pfam PF03102 NeuB family 479 720 4.2E-89 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 Gene3D G3DSA:3.20.20.70 435 739 3.7E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_04860 0e30abf73cfcec7a8f7c7d8a24b8c940 793 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 68 4.9E-14 T 14-10-2018 AMBLS11_17100 5999d2b38b1ae55c6daad989ccd30983 348 Pfam PF01979 Amidohydrolase family 11 304 7.8E-14 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMBLS11_17100 5999d2b38b1ae55c6daad989ccd30983 348 SUPERFAMILY SSF51556 1 342 3.94E-144 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_17100 5999d2b38b1ae55c6daad989ccd30983 348 Hamap MF_00219 Dihydroorotase [pyrC]. 2 343 45.563 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_17100 5999d2b38b1ae55c6daad989ccd30983 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 3.6E-135 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_17100 5999d2b38b1ae55c6daad989ccd30983 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_17100 5999d2b38b1ae55c6daad989ccd30983 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_17100 5999d2b38b1ae55c6daad989ccd30983 348 PIRSF PIRSF001237 1 345 1.0E-142 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_17100 5999d2b38b1ae55c6daad989ccd30983 348 Gene3D G3DSA:3.20.20.140 2 344 1.7E-107 T 14-10-2018 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 Pfam PF09190 DALR domain 342 402 6.3E-19 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 38.583 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 7.0E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 7.0E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 7.0E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 7.0E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 Gene3D G3DSA:3.40.50.620 1 305 8.2E-135 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.9E-135 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 1.2E-180 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 SMART SM00840 342 402 6.9E-24 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 SUPERFAMILY SSF52374 2 312 3.22E-101 T 14-10-2018 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 SUPERFAMILY SSF47323 316 459 7.85E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_11360 9c23e79c188917c0977bf23a9aaa108b 460 Gene3D G3DSA:1.20.120.640 306 459 1.5E-45 T 14-10-2018 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 Pfam PF00459 Inositol monophosphatase family 2 251 5.3E-72 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 7.6E-24 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 7.6E-24 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 7.6E-24 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 7.6E-24 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 SUPERFAMILY SSF56655 1 257 8.12E-85 T 14-10-2018 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 Gene3D G3DSA:3.30.540.10 1 140 3.7E-52 T 14-10-2018 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 Gene3D G3DSA:3.40.190.80 141 258 7.7E-36 T 14-10-2018 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_12950 4ce6345e21a5956911740dd8acf00b91 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 6.0E-60 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_17240 c50aa69f95cb357042bbc419166cb5b6 119 Gene3D G3DSA:3.30.56.110 2 119 8.1E-50 T 14-10-2018 AMBLS11_17240 c50aa69f95cb357042bbc419166cb5b6 119 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 5 117 8.6E-48 T 14-10-2018 IPR018714 Protein of unknown function DUF2237 AMBLS11_18965 17478e53e4398e7c2c6e34a6b62ea138 128 Pfam PF03899 ATP synthase I chain 17 105 6.4E-15 T 14-10-2018 IPR005598 ATP synthase protein I AMBLS11_02320 f2bf0c8305a4cf325b8a31484136d634 108 Pfam PF00085 Thioredoxin 5 106 7.1E-34 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMBLS11_02320 f2bf0c8305a4cf325b8a31484136d634 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 14-10-2018 AMBLS11_02320 f2bf0c8305a4cf325b8a31484136d634 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 14-10-2018 AMBLS11_02320 f2bf0c8305a4cf325b8a31484136d634 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 14-10-2018 AMBLS11_02320 f2bf0c8305a4cf325b8a31484136d634 108 SUPERFAMILY SSF52833 2 108 1.8E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_02320 f2bf0c8305a4cf325b8a31484136d634 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 5.3E-39 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMBLS11_02320 f2bf0c8305a4cf325b8a31484136d634 108 PIRSF PIRSF000077 2 108 4.8E-44 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMBLS11_02320 f2bf0c8305a4cf325b8a31484136d634 108 Gene3D G3DSA:3.40.30.10 1 108 5.6E-37 T 14-10-2018 AMBLS11_02320 f2bf0c8305a4cf325b8a31484136d634 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMBLS11_04665 e09f1cedf36b648d9c6f005dba8410ad 467 Pfam PF01464 Transglycosylase SLT domain 306 402 1.3E-18 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 AMBLS11_04665 e09f1cedf36b648d9c6f005dba8410ad 467 Gene3D G3DSA:1.10.530.10 293 466 7.5E-32 T 14-10-2018 AMBLS11_04665 e09f1cedf36b648d9c6f005dba8410ad 467 SUPERFAMILY SSF53955 297 461 3.49E-31 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMBLS11_04665 e09f1cedf36b648d9c6f005dba8410ad 467 Gene3D G3DSA:3.40.190.10 127 232 8.5E-52 T 14-10-2018 AMBLS11_04665 e09f1cedf36b648d9c6f005dba8410ad 467 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 467 44.951 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AMBLS11_04665 e09f1cedf36b648d9c6f005dba8410ad 467 Gene3D G3DSA:3.40.190.10 39 271 8.5E-52 T 14-10-2018 AMBLS11_04665 e09f1cedf36b648d9c6f005dba8410ad 467 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 275 1.3E-22 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_04665 e09f1cedf36b648d9c6f005dba8410ad 467 SUPERFAMILY SSF53850 43 277 1.09E-29 T 14-10-2018 AMBLS11_04665 e09f1cedf36b648d9c6f005dba8410ad 467 SMART SM00062 42 276 1.8E-15 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_16470 b6dca23b19759cbad4582824f723f7ac 774 Pfam PF00593 TonB dependent receptor 299 751 1.9E-29 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_16470 b6dca23b19759cbad4582824f723f7ac 774 Gene3D G3DSA:2.40.170.20 36 413 1.6E-42 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_16470 b6dca23b19759cbad4582824f723f7ac 774 Gene3D G3DSA:2.40.170.20 452 774 1.7E-54 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_16470 b6dca23b19759cbad4582824f723f7ac 774 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 151 7.8E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_16470 b6dca23b19759cbad4582824f723f7ac 774 SUPERFAMILY SSF56935 20 774 4.68E-95 T 14-10-2018 AMBLS11_18820 5e487fcd5e7ddb37241402aab720ea56 86 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 7 85 26.969 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AMBLS11_18820 5e487fcd5e7ddb37241402aab720ea56 86 Pfam PF01206 Sulfurtransferase TusA 15 83 3.2E-22 T 14-10-2018 IPR001455 TusA-like domain AMBLS11_18820 5e487fcd5e7ddb37241402aab720ea56 86 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 16 40 - T 14-10-2018 IPR001455 TusA-like domain AMBLS11_18820 5e487fcd5e7ddb37241402aab720ea56 86 Gene3D G3DSA:3.30.110.40 5 85 6.6E-28 T 14-10-2018 IPR036868 TusA-like domain superfamily AMBLS11_18820 5e487fcd5e7ddb37241402aab720ea56 86 SUPERFAMILY SSF64307 8 83 2.22E-23 T 14-10-2018 IPR036868 TusA-like domain superfamily AMBLS11_09380 ff776573543242ae829c0a53858dc337 1612 PIRSF PIRSF036761 1 1611 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMBLS11_09380 ff776573543242ae829c0a53858dc337 1612 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1604 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMBLS11_09380 ff776573543242ae829c0a53858dc337 1612 SUPERFAMILY SSF53223 757 944 1.34E-24 T 14-10-2018 AMBLS11_09380 ff776573543242ae829c0a53858dc337 1612 SUPERFAMILY SSF51735 948 1235 6.5E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04790 16a63d7ad6c2fc9cbd3d1c54abe61301 279 SUPERFAMILY SSF64518 1 278 8.5E-92 T 14-10-2018 AMBLS11_04790 16a63d7ad6c2fc9cbd3d1c54abe61301 279 PRINTS PR00207 Flagellin signature 76 95 4.0E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04790 16a63d7ad6c2fc9cbd3d1c54abe61301 279 PRINTS PR00207 Flagellin signature 111 134 4.0E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04790 16a63d7ad6c2fc9cbd3d1c54abe61301 279 PRINTS PR00207 Flagellin signature 37 54 4.0E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04790 16a63d7ad6c2fc9cbd3d1c54abe61301 279 Gene3D G3DSA:1.20.58.1830 5 33 1.0E-73 T 14-10-2018 AMBLS11_04790 16a63d7ad6c2fc9cbd3d1c54abe61301 279 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-38 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_04790 16a63d7ad6c2fc9cbd3d1c54abe61301 279 Gene3D G3DSA:1.10.8.410 227 278 6.3E-23 T 14-10-2018 AMBLS11_04790 16a63d7ad6c2fc9cbd3d1c54abe61301 279 Gene3D G3DSA:1.20.1330.10 45 171 1.0E-73 T 14-10-2018 AMBLS11_04790 16a63d7ad6c2fc9cbd3d1c54abe61301 279 Pfam PF00700 Bacterial flagellin C-terminal helical region 194 278 1.5E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_02400 782e027289d422cc0598b563188d048c 432 SUPERFAMILY SSF52540 3 430 6.48E-179 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02400 782e027289d422cc0598b563188d048c 432 Gene3D G3DSA:3.40.440.10 6 249 5.2E-103 T 14-10-2018 AMBLS11_02400 782e027289d422cc0598b563188d048c 432 Gene3D G3DSA:1.10.300.10 102 201 5.2E-103 T 14-10-2018 AMBLS11_02400 782e027289d422cc0598b563188d048c 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMBLS11_02400 782e027289d422cc0598b563188d048c 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 4.5E-178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMBLS11_02400 782e027289d422cc0598b563188d048c 432 Gene3D G3DSA:3.90.170.10 267 432 3.2E-69 T 14-10-2018 AMBLS11_02400 782e027289d422cc0598b563188d048c 432 SMART SM00788 4 425 7.4E-299 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMBLS11_02400 782e027289d422cc0598b563188d048c 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 3.6E-193 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMBLS11_02400 782e027289d422cc0598b563188d048c 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMBLS11_02400 782e027289d422cc0598b563188d048c 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMBLS11_00575 1059040e0a690324b2a71d25e9edf143 344 Pfam PF13343 Bacterial extracellular solute-binding protein 98 310 7.2E-11 T 14-10-2018 AMBLS11_00575 1059040e0a690324b2a71d25e9edf143 344 SUPERFAMILY SSF53850 44 332 7.06E-46 T 14-10-2018 AMBLS11_00575 1059040e0a690324b2a71d25e9edf143 344 PIRSF PIRSF002825 1 344 5.8E-83 T 14-10-2018 IPR026045 Ferric binding protein AMBLS11_00575 1059040e0a690324b2a71d25e9edf143 344 Gene3D G3DSA:3.40.190.10 45 313 8.7E-69 T 14-10-2018 AMBLS11_00575 1059040e0a690324b2a71d25e9edf143 344 Gene3D G3DSA:3.40.190.10 142 325 8.7E-69 T 14-10-2018 AMBLS11_12450 725c7ae166875fd26d3202b9c3dfba06 128 SUPERFAMILY SSF46689 46 116 8.96E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_12450 725c7ae166875fd26d3202b9c3dfba06 128 Pfam PF08765 Mor transcription activator family 42 122 7.7E-14 T 14-10-2018 IPR014875 Mor transcription activator AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.5E-65 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 1.5E-65 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.5E-65 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 1.5E-65 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 1.5E-65 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 1.5E-65 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 1.5E-65 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.5E-65 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.5E-65 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 Gene3D G3DSA:3.50.50.60 4 317 1.7E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.1E-26 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 1.1E-26 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.1E-26 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.1E-26 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 1.1E-26 T 14-10-2018 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 PIRSF PIRSF000350 1 445 5.8E-87 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 7.2E-66 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 448 1.8E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 Gene3D G3DSA:3.30.390.30 337 449 2.9E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 SUPERFAMILY SSF51905 1 370 2.27E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 448 4.4E-212 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 SUPERFAMILY SSF55424 335 448 3.09E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMBLS11_16610 f7ce8697a90c1c19157e5225c1e04b2f 449 Gene3D G3DSA:3.50.50.60 143 260 1.7E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_05950 8de5f0d1e627fbaaa9e3f5ee341ed226 602 SUPERFAMILY SSF90123 16 327 5.76E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_05950 8de5f0d1e627fbaaa9e3f5ee341ed226 602 SMART SM00382 389 575 2.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_05950 8de5f0d1e627fbaaa9e3f5ee341ed226 602 Gene3D G3DSA:1.20.1560.10 3 330 1.3E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_05950 8de5f0d1e627fbaaa9e3f5ee341ed226 602 SUPERFAMILY SSF52540 359 600 2.22E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05950 8de5f0d1e627fbaaa9e3f5ee341ed226 602 Pfam PF00664 ABC transporter transmembrane region 31 293 9.2E-54 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMBLS11_05950 8de5f0d1e627fbaaa9e3f5ee341ed226 602 Pfam PF00005 ABC transporter 381 529 2.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_05950 8de5f0d1e627fbaaa9e3f5ee341ed226 602 Gene3D G3DSA:3.40.50.300 354 601 2.1E-90 T 14-10-2018 AMBLS11_05950 8de5f0d1e627fbaaa9e3f5ee341ed226 602 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_02605 614b4ebb5c8ef3127bd95b28d28a4fc5 324 SUPERFAMILY SSF48576 5 323 8.96E-99 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMBLS11_02605 614b4ebb5c8ef3127bd95b28d28a4fc5 324 Gene3D G3DSA:1.10.600.10 1 324 2.4E-112 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMBLS11_02605 614b4ebb5c8ef3127bd95b28d28a4fc5 324 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMBLS11_02605 614b4ebb5c8ef3127bd95b28d28a4fc5 324 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMBLS11_02605 614b4ebb5c8ef3127bd95b28d28a4fc5 324 Pfam PF00348 Polyprenyl synthetase 32 263 4.2E-75 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 SMART SM00388 289 394 0.0039 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 Gene3D G3DSA:1.10.287.130 266 389 3.6E-25 T 14-10-2018 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 1.1E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 523 1.1E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 502 1.1E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 542 1.1E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 Pfam PF00672 HAMP domain 178 229 2.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 SUPERFAMILY SSF47384 284 392 2.55E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 SMART SM00304 176 233 3.9E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 Gene3D G3DSA:3.30.565.10 395 553 1.3E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 543 3.5E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 SMART SM00387 434 545 1.4E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 393 1.0E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16600 eaee4b89da1d42a720a5069f6493c14e 555 SUPERFAMILY SSF55874 386 546 3.67E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 189 379 5.9E-31 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 Gene3D G3DSA:3.40.50.12740 1 167 1.2E-41 T 14-10-2018 AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 Gene3D G3DSA:3.60.40.10 168 380 2.2E-30 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 SUPERFAMILY SSF52172 2 142 1.28E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 SMART SM00448 1 115 1.3E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 SMART SM00331 164 381 5.6E-9 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 Gene3D G3DSA:3.30.565.10 400 553 1.8E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 SUPERFAMILY SSF81606 175 378 1.83E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 SUPERFAMILY SSF55874 417 549 8.64E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06060 f71d370fcc312db6a25f257391fd45b5 558 Pfam PF00072 Response regulator receiver domain 3 115 8.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_11045 f6510b203ecf870fce995b3466786d74 283 Gene3D G3DSA:1.10.10.10 1 79 1.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11045 f6510b203ecf870fce995b3466786d74 283 Pfam PF01380 SIS domain 124 252 5.0E-25 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMBLS11_11045 f6510b203ecf870fce995b3466786d74 283 Gene3D G3DSA:3.40.50.10490 93 274 1.5E-40 T 14-10-2018 AMBLS11_11045 f6510b203ecf870fce995b3466786d74 283 SUPERFAMILY SSF53697 91 277 8.29E-41 T 14-10-2018 AMBLS11_11045 f6510b203ecf870fce995b3466786d74 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 7.1E-30 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMBLS11_11045 f6510b203ecf870fce995b3466786d74 283 SUPERFAMILY SSF46689 1 80 1.15E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 Pfam PF03412 Peptidase C39 family 19 147 8.2E-35 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 Pfam PF00005 ABC transporter 550 688 6.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 Gene3D G3DSA:3.90.70.10 10 155 2.0E-40 T 14-10-2018 AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 SUPERFAMILY SSF52540 531 734 5.97E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 ProSitePatterns PS00211 ABC transporters family signature. 661 675 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 Pfam PF00664 ABC transporter transmembrane region 176 442 1.6E-34 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 Gene3D G3DSA:3.40.50.300 512 747 2.2E-62 T 14-10-2018 AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 SMART SM00382 558 733 3.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 SUPERFAMILY SSF90123 157 468 5.62E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_16645 9b0ddd77bd174b9ee210eec15567eacf 755 Gene3D G3DSA:1.20.1560.10 160 474 4.2E-61 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_03310 5538b23ae581c9dad9f68448d1edd68f 393 Pfam PF14559 Tetratricopeptide repeat 319 368 6.6E-6 T 14-10-2018 AMBLS11_03310 5538b23ae581c9dad9f68448d1edd68f 393 Pfam PF00756 Putative esterase 41 224 7.9E-27 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMBLS11_03310 5538b23ae581c9dad9f68448d1edd68f 393 SMART SM00028 340 373 0.0068 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_03310 5538b23ae581c9dad9f68448d1edd68f 393 SMART SM00028 306 339 77.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_03310 5538b23ae581c9dad9f68448d1edd68f 393 Gene3D G3DSA:1.25.40.10 296 390 6.8E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_03310 5538b23ae581c9dad9f68448d1edd68f 393 SUPERFAMILY SSF53474 35 270 2.34E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_03310 5538b23ae581c9dad9f68448d1edd68f 393 SUPERFAMILY SSF48452 308 370 1.28E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_03310 5538b23ae581c9dad9f68448d1edd68f 393 Gene3D G3DSA:3.40.50.1820 33 295 2.2E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07385 395afb39c9db3b8b7cf06164cdd9ee4f 242 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 83 188 7.1E-14 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AMBLS11_07385 395afb39c9db3b8b7cf06164cdd9ee4f 242 Gene3D G3DSA:3.10.620.30 41 233 4.4E-73 T 14-10-2018 AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 Gene3D G3DSA:3.90.320.10 939 1273 5.0E-81 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 Gene3D G3DSA:3.40.50.300 479 879 3.1E-102 T 14-10-2018 AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 Gene3D G3DSA:3.40.50.300 31 470 1.6E-104 T 14-10-2018 AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 Pfam PF13361 UvrD-like helicase C-terminal domain 569 869 7.5E-15 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 Gene3D G3DSA:1.10.3170.10 177 381 1.6E-104 T 14-10-2018 AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 SUPERFAMILY SSF52980 948 1269 3.16E-70 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 Pfam PF00580 UvrD/REP helicase N-terminal domain 36 470 2.5E-57 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1032 1240 4.3E-7 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 Gene3D G3DSA:1.10.486.10 632 774 3.1E-102 T 14-10-2018 AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 29 1269 19.924 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 SUPERFAMILY SSF52540 26 873 5.17E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10800 5be6f594637b04fcc9aee19b5852691e 1341 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 32 1268 8.5E-241 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 SMART SM00052 550 796 4.4E-104 T 14-10-2018 IPR001633 EAL domain AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 Pfam PF14827 Double sensory domain of two-component sensor kinase 48 273 9.0E-17 T 14-10-2018 IPR029150 Double Cache domain 3 AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 Pfam PF00563 EAL domain 556 791 4.0E-75 T 14-10-2018 IPR001633 EAL domain AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 533 7.5E-48 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 SUPERFAMILY SSF141868 557 804 6.54E-88 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 Gene3D G3DSA:3.30.70.270 373 552 2.5E-57 T 14-10-2018 AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 538 2.3E-44 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 SMART SM00267 368 540 1.8E-57 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 Gene3D G3DSA:3.20.20.450 553 807 6.2E-95 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00290 e3c4c7cc19b55eb0eda238daf9c2f09d 814 SUPERFAMILY SSF55073 384 541 3.37E-46 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_06000 689b4bd980a1cb54e0f56f242eeba3b2 362 SUPERFAMILY SSF51569 9 346 1.28E-133 T 14-10-2018 AMBLS11_06000 689b4bd980a1cb54e0f56f242eeba3b2 362 Gene3D G3DSA:3.20.20.70 3 350 1.2E-150 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_06000 689b4bd980a1cb54e0f56f242eeba3b2 362 PIRSF PIRSF001361 1 354 7.2E-155 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMBLS11_06000 689b4bd980a1cb54e0f56f242eeba3b2 362 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 347 5.8E-151 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMBLS11_06000 689b4bd980a1cb54e0f56f242eeba3b2 362 Pfam PF00793 DAHP synthetase I family 41 340 2.0E-98 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMBLS11_09700 308ddbfba78d838e15f02fddd5f81c34 190 PIRSF PIRSF000847 1 190 2.3E-43 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMBLS11_09700 308ddbfba78d838e15f02fddd5f81c34 190 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 183 4.2E-48 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMBLS11_09700 308ddbfba78d838e15f02fddd5f81c34 190 Gene3D G3DSA:1.20.120.1760 2 182 2.9E-17 T 14-10-2018 AMBLS11_09700 308ddbfba78d838e15f02fddd5f81c34 190 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 70 1.5E-16 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMBLS11_09700 308ddbfba78d838e15f02fddd5f81c34 190 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMBLS11_05010 c291d35ba65d96b31903911aca8a6174 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.1E-27 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AMBLS11_05010 c291d35ba65d96b31903911aca8a6174 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.5E-15 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMBLS11_05010 c291d35ba65d96b31903911aca8a6174 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.5E-15 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMBLS11_05010 c291d35ba65d96b31903911aca8a6174 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.5E-15 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMBLS11_05010 c291d35ba65d96b31903911aca8a6174 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.3E-24 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMBLS11_05010 c291d35ba65d96b31903911aca8a6174 89 PIRSF PIRSF004669 1 89 1.2E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMBLS11_06225 c5beb9920351ae7130a6c5e2df0a0e8a 165 Gene3D G3DSA:3.30.2010.10 79 156 1.7E-8 T 14-10-2018 AMBLS11_06225 c5beb9920351ae7130a6c5e2df0a0e8a 165 Pfam PF01863 Protein of unknown function DUF45 93 151 6.4E-12 T 14-10-2018 IPR002725 Protein of unknown function DUF45 AMBLS11_12985 7d3394107ff8f560b25fc81ada05bfa4 348 Pfam PF02547 Queuosine biosynthesis protein 3 345 8.7E-135 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMBLS11_12985 7d3394107ff8f560b25fc81ada05bfa4 348 SUPERFAMILY SSF111337 1 345 1.31E-136 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMBLS11_12985 7d3394107ff8f560b25fc81ada05bfa4 348 Gene3D G3DSA:2.40.10.240 64 161 3.2E-120 T 14-10-2018 AMBLS11_12985 7d3394107ff8f560b25fc81ada05bfa4 348 Gene3D G3DSA:3.40.1780.10 14 345 3.2E-120 T 14-10-2018 AMBLS11_12985 7d3394107ff8f560b25fc81ada05bfa4 348 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 3.4E-151 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMBLS11_12985 7d3394107ff8f560b25fc81ada05bfa4 348 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.332 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMBLS11_10060 f715dd1d56a3dd0b179e1afc9c304503 269 Gene3D G3DSA:3.40.50.1000 5 259 2.6E-80 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_10060 f715dd1d56a3dd0b179e1afc9c304503 269 SUPERFAMILY SSF56784 1 231 2.27E-45 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_10060 f715dd1d56a3dd0b179e1afc9c304503 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 5.0E-28 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AMBLS11_10060 f715dd1d56a3dd0b179e1afc9c304503 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 71 3.6E-10 T 14-10-2018 AMBLS11_10060 f715dd1d56a3dd0b179e1afc9c304503 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 184 230 6.0E-7 T 14-10-2018 AMBLS11_10060 f715dd1d56a3dd0b179e1afc9c304503 269 Gene3D G3DSA:3.30.980.20 98 186 2.6E-80 T 14-10-2018 AMBLS11_10060 f715dd1d56a3dd0b179e1afc9c304503 269 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 5 267 5.1E-67 T 14-10-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 AMBLS11_16755 4452a9cefdb4b0d72f99f20158049b9f 304 SUPERFAMILY SSF54637 153 297 1.01E-42 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_16755 4452a9cefdb4b0d72f99f20158049b9f 304 SUPERFAMILY SSF55729 2 166 1.83E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_16755 4452a9cefdb4b0d72f99f20158049b9f 304 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.1E-52 T 14-10-2018 IPR012660 Thioesterase, putative AMBLS11_16755 4452a9cefdb4b0d72f99f20158049b9f 304 Gene3D G3DSA:3.10.129.10 146 298 6.0E-49 T 14-10-2018 AMBLS11_16755 4452a9cefdb4b0d72f99f20158049b9f 304 Pfam PF00583 Acetyltransferase (GNAT) family 19 122 5.9E-14 T 14-10-2018 IPR000182 GNAT domain AMBLS11_16755 4452a9cefdb4b0d72f99f20158049b9f 304 Gene3D G3DSA:3.40.630.30 3 145 6.7E-25 T 14-10-2018 AMBLS11_16755 4452a9cefdb4b0d72f99f20158049b9f 304 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 6.9E-43 T 14-10-2018 IPR012660 Thioesterase, putative AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 SUPERFAMILY SSF82051 2 157 6.15E-54 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 Gene3D G3DSA:2.70.210.12 1 158 5.7E-58 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 PIRSF PIRSF002401 1 375 1.1E-139 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 2.2E-146 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 Pfam PF01018 GTP1/OBG 4 157 2.5E-56 T 14-10-2018 IPR006169 GTP1/OBG domain AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.0E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 SUPERFAMILY SSF52540 152 340 4.32E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 Gene3D G3DSA:3.40.50.300 159 336 2.4E-52 T 14-10-2018 AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.0E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.0E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.0E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.0E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_02620 4e119f08177b66e4ec77d1d07838a139 388 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.497 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMBLS11_00510 f00bd1604368322ca73c3bee80e054fc 243 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 235 8.1E-25 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00510 f00bd1604368322ca73c3bee80e054fc 243 Gene3D G3DSA:3.40.50.10090 31 164 1.5E-41 T 14-10-2018 AMBLS11_00510 f00bd1604368322ca73c3bee80e054fc 243 SUPERFAMILY SSF69618 2 239 8.5E-31 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00510 f00bd1604368322ca73c3bee80e054fc 243 Gene3D G3DSA:3.40.50.10090 2 233 1.5E-41 T 14-10-2018 AMBLS11_14575 3647c32c175caf61995c68c3c58181f3 393 SUPERFAMILY SSF54506 4 183 8.63E-68 T 14-10-2018 AMBLS11_14575 3647c32c175caf61995c68c3c58181f3 393 Gene3D G3DSA:3.10.310.10 182 372 4.9E-148 T 14-10-2018 AMBLS11_14575 3647c32c175caf61995c68c3c58181f3 393 Pfam PF04303 PrpF protein 7 389 1.6E-164 T 14-10-2018 IPR007400 PrpF protein AMBLS11_14575 3647c32c175caf61995c68c3c58181f3 393 SUPERFAMILY SSF54506 187 390 2.04E-75 T 14-10-2018 AMBLS11_14575 3647c32c175caf61995c68c3c58181f3 393 Gene3D G3DSA:3.10.310.10 12 386 4.9E-148 T 14-10-2018 AMBLS11_14575 3647c32c175caf61995c68c3c58181f3 393 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 6 391 1.1E-217 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AMBLS11_06370 8dcdb092a8776bfa0c2d0aa155528802 311 Gene3D G3DSA:3.40.50.300 76 305 1.5E-51 T 14-10-2018 AMBLS11_06370 8dcdb092a8776bfa0c2d0aa155528802 311 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_06370 8dcdb092a8776bfa0c2d0aa155528802 311 Pfam PF00005 ABC transporter 78 200 6.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_06370 8dcdb092a8776bfa0c2d0aa155528802 311 SMART SM00382 81 267 2.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_06370 8dcdb092a8776bfa0c2d0aa155528802 311 SUPERFAMILY SSF52540 77 281 2.51E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00850 723d6b320f076eca4f7eeea406249086 161 Pfam PF11736 Protein of unknown function (DUF3299) 34 159 3.0E-41 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 AMBLS11_00850 723d6b320f076eca4f7eeea406249086 161 Gene3D G3DSA:2.40.50.870 27 161 1.1E-45 T 14-10-2018 AMBLS11_13200 4e6226d4777d409807f4a0fc600e405c 314 Pfam PF13614 AAA domain 122 266 2.6E-11 T 14-10-2018 IPR025669 AAA domain AMBLS11_13200 4e6226d4777d409807f4a0fc600e405c 314 Gene3D G3DSA:3.40.50.300 3 313 1.4E-50 T 14-10-2018 AMBLS11_13200 4e6226d4777d409807f4a0fc600e405c 314 SUPERFAMILY SSF52540 120 298 7.49E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13200 4e6226d4777d409807f4a0fc600e405c 314 TIGRFAM TIGR03018 pepcterm_TyrKin: exopolysaccharide/PEP-CTERM locus tyrosine autokinase 90 292 2.3E-77 T 14-10-2018 AMBLS11_13200 4e6226d4777d409807f4a0fc600e405c 314 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 121 308 6.0E-33 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AMBLS11_14130 998a6c8a32a0b94e2ce79df677a29506 246 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 168 246 2.5E-36 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 AMBLS11_14130 998a6c8a32a0b94e2ce79df677a29506 246 SUPERFAMILY SSF52833 8 244 3.1E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_14130 998a6c8a32a0b94e2ce79df677a29506 246 PRINTS PR00160 Glutaredoxin signature 177 195 4.1E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup AMBLS11_14130 998a6c8a32a0b94e2ce79df677a29506 246 PRINTS PR00160 Glutaredoxin signature 218 231 4.1E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup AMBLS11_14130 998a6c8a32a0b94e2ce79df677a29506 246 PRINTS PR00160 Glutaredoxin signature 232 245 4.1E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup AMBLS11_14130 998a6c8a32a0b94e2ce79df677a29506 246 Pfam PF00462 Glutaredoxin 177 235 6.4E-19 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMBLS11_14130 998a6c8a32a0b94e2ce79df677a29506 246 Gene3D G3DSA:3.40.30.10 8 169 7.3E-61 T 14-10-2018 AMBLS11_14130 998a6c8a32a0b94e2ce79df677a29506 246 Gene3D G3DSA:3.40.30.10 176 246 1.4E-24 T 14-10-2018 AMBLS11_14130 998a6c8a32a0b94e2ce79df677a29506 246 Pfam PF08534 Redoxin 9 164 4.8E-33 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMBLS11_14990 a22f9c3a04c1e92ad9f1805ce4db5f01 239 Gene3D G3DSA:1.20.1050.10 92 217 3.7E-43 T 14-10-2018 AMBLS11_14990 a22f9c3a04c1e92ad9f1805ce4db5f01 239 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 82 2.7E-18 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_14990 a22f9c3a04c1e92ad9f1805ce4db5f01 239 Gene3D G3DSA:3.40.30.10 1 91 1.5E-36 T 14-10-2018 AMBLS11_14990 a22f9c3a04c1e92ad9f1805ce4db5f01 239 SUPERFAMILY SSF52833 7 86 1.51E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_14990 a22f9c3a04c1e92ad9f1805ce4db5f01 239 Pfam PF00043 Glutathione S-transferase, C-terminal domain 139 201 1.5E-10 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMBLS11_14990 a22f9c3a04c1e92ad9f1805ce4db5f01 239 SUPERFAMILY SSF47616 79 214 2.37E-34 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_16235 4ebdceb0bb58adcc32b8397d3daf1be6 557 Gene3D G3DSA:3.90.550.10 273 507 8.1E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16235 4ebdceb0bb58adcc32b8397d3daf1be6 557 Pfam PF00535 Glycosyl transferase family 2 282 445 2.3E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_16235 4ebdceb0bb58adcc32b8397d3daf1be6 557 SUPERFAMILY SSF53448 274 531 1.41E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 Gene3D G3DSA:1.10.150.80 195 293 5.8E-21 T 14-10-2018 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 SMART SM00341 210 290 2.0E-11 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 SMART SM00474 3 171 1.5E-39 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 Pfam PF00570 HRDC domain 213 280 1.7E-15 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 Pfam PF01612 3'-5' exonuclease 3 170 9.0E-39 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 Gene3D G3DSA:1.10.150.80 299 384 3.2E-24 T 14-10-2018 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 Gene3D G3DSA:3.30.420.10 1 194 3.8E-65 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 TIGRFAM TIGR01388 rnd: ribonuclease D 5 377 3.6E-113 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 SUPERFAMILY SSF53098 1 210 1.18E-64 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 SUPERFAMILY SSF47819 300 380 1.44E-14 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 Hamap MF_01899 Ribonuclease D [rnd]. 3 380 39.415 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMBLS11_11720 8cf687fd57746deccc4ab93212ff8ec1 385 SUPERFAMILY SSF47819 193 290 5.01E-25 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 SMART SM00838 607 695 6.8E-55 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.0E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.0E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.0E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.0E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Pfam PF03764 Elongation factor G, domain IV 486 605 4.8E-50 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Gene3D G3DSA:3.30.70.870 440 490 3.2E-26 T 14-10-2018 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 113.129 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-65 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 SUPERFAMILY SSF54980 409 487 2.84E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 SUPERFAMILY SSF52540 6 288 1.76E-107 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Gene3D G3DSA:3.40.50.300 2 299 2.2E-116 T 14-10-2018 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Pfam PF14492 Elongation Factor G, domain II 411 484 5.7E-35 T 14-10-2018 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Pfam PF00679 Elongation factor G C-terminus 607 693 8.8E-29 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 SUPERFAMILY SSF54211 486 606 6.07E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Gene3D G3DSA:2.40.30.10 300 423 5.5E-51 T 14-10-2018 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 SUPERFAMILY SSF50447 271 411 1.13E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Pfam PF03144 Elongation factor Tu domain 2 331 398 6.4E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 SUPERFAMILY SSF54980 610 697 1.44E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.9E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Gene3D G3DSA:3.30.230.10 491 695 2.6E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 Gene3D G3DSA:3.30.70.240 611 682 2.6E-92 T 14-10-2018 AMBLS11_17010 67e716132aa86aaf3f0d8c9ce578fada 700 SMART SM00889 487 605 6.5E-79 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 9.3E-261 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.825 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 Gene3D G3DSA:3.60.20.10 2 242 1.2E-78 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 SUPERFAMILY SSF56235 2 235 6.18E-74 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 SUPERFAMILY SSF53697 246 610 3.34E-113 T 14-10-2018 AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 Pfam PF13522 Glutamine amidotransferase domain 54 182 1.2E-20 T 14-10-2018 AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 Gene3D G3DSA:3.40.50.10490 250 609 4.2E-150 T 14-10-2018 AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 Pfam PF01380 SIS domain 291 419 1.1E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 Pfam PF01380 SIS domain 463 592 5.0E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMBLS11_17775 4ee9d47f75b878ba006eaf7874242b1c 610 Gene3D G3DSA:3.40.50.10490 448 595 4.2E-150 T 14-10-2018 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Gene3D G3DSA:1.10.1740.10 2 86 2.4E-30 T 14-10-2018 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Pfam PF04542 Sigma-70 region 2 17 89 8.0E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 SUPERFAMILY SSF88659 163 238 1.61E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 SUPERFAMILY SSF88659 91 155 2.83E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PIRSF PIRSF000770 3 243 7.0E-33 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 17 236 3.9E-82 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 SUPERFAMILY SSF88946 9 89 2.22E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 6 238 64.313 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Gene3D G3DSA:1.20.140.160 88 237 2.9E-41 T 14-10-2018 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Pfam PF04545 Sigma-70, region 4 184 232 1.1E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 Pfam PF04539 Sigma-70 region 3 99 141 3.9E-7 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 235 4.1E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PRINTS PR00046 Major sigma-70 factor signature 44 57 6.7E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PRINTS PR00046 Major sigma-70 factor signature 188 200 6.7E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PRINTS PR00046 Major sigma-70 factor signature 220 231 6.7E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 PRINTS PR00046 Major sigma-70 factor signature 205 220 6.7E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 44 57 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05050 c5e3428bf2aaaa3f1bcadc140ca4c46e 243 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16065 4e2234af4dd2f15f3854048adc9d532d 301 Gene3D G3DSA:3.30.470.80 182 299 6.8E-43 T 14-10-2018 AMBLS11_16065 4e2234af4dd2f15f3854048adc9d532d 301 Gene3D G3DSA:3.40.50.20 1 114 2.0E-39 T 14-10-2018 AMBLS11_16065 4e2234af4dd2f15f3854048adc9d532d 301 SUPERFAMILY SSF56059 98 288 2.41E-49 T 14-10-2018 AMBLS11_16065 4e2234af4dd2f15f3854048adc9d532d 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 3.3E-84 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AMBLS11_16065 4e2234af4dd2f15f3854048adc9d532d 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 4.6E-67 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AMBLS11_16065 4e2234af4dd2f15f3854048adc9d532d 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.13 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AMBLS11_16065 4e2234af4dd2f15f3854048adc9d532d 301 Gene3D G3DSA:3.30.1490.20 115 181 3.0E-27 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 SUPERFAMILY SSF52218 69 216 1.02E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 15 607 8.5E-254 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 Pfam PF00258 Flavodoxin 72 201 1.9E-32 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 Gene3D G3DSA:3.40.50.360 60 224 1.9E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 Pfam PF00175 Oxidoreductase NAD-binding domain 465 571 9.9E-19 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 288 2.9E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 549 2.9E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 2.9E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 556 564 2.9E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 489 498 2.9E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 401 2.9E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 502 513 2.9E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 Pfam PF00667 FAD binding domain 240 432 6.8E-25 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 SUPERFAMILY SSF63380 237 454 3.4E-61 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 SUPERFAMILY SSF52343 452 607 2.62E-51 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PIRSF PIRSF000207 1 607 1.1E-256 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00369 Flavodoxin signature 151 161 4.0E-13 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00369 Flavodoxin signature 175 194 4.0E-13 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00369 Flavodoxin signature 119 130 4.0E-13 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 PRINTS PR00369 Flavodoxin signature 71 84 4.0E-13 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 Gene3D G3DSA:3.40.50.80 453 607 6.1E-59 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 Gene3D G3DSA:2.40.30.10 240 447 1.7E-70 T 14-10-2018 AMBLS11_15575 8da3f9e133a7ed1cb502dd0a656ee93f 607 Gene3D G3DSA:1.20.990.10 288 392 1.7E-70 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 AMBLS11_18660 b7823069b9bc1046ef3ce84d1249bae9 817 PIRSF PIRSF500064 3 817 2.3E-267 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AMBLS11_18660 b7823069b9bc1046ef3ce84d1249bae9 817 SMART SM00563 303 430 1.8E-28 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_18660 b7823069b9bc1046ef3ce84d1249bae9 817 PIRSF PIRSF000437 19 817 4.5E-257 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AMBLS11_18660 b7823069b9bc1046ef3ce84d1249bae9 817 SUPERFAMILY SSF69593 246 490 5.23E-28 T 14-10-2018 AMBLS11_18660 b7823069b9bc1046ef3ce84d1249bae9 817 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 812 26.699 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AMBLS11_18660 b7823069b9bc1046ef3ce84d1249bae9 817 Pfam PF01553 Acyltransferase 295 427 5.3E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_18660 b7823069b9bc1046ef3ce84d1249bae9 817 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 13 807 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AMBLS11_00655 1415c6e35b79a7c75b4fbe15e4fb1ffc 222 Gene3D G3DSA:1.10.287.110 156 220 3.8E-10 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMBLS11_00655 1415c6e35b79a7c75b4fbe15e4fb1ffc 222 Pfam PF12339 DNA-J related protein 18 150 1.2E-36 T 14-10-2018 IPR021059 DnaJ-related protein, N-terminal AMBLS11_00655 1415c6e35b79a7c75b4fbe15e4fb1ffc 222 SUPERFAMILY SSF46565 162 216 2.62E-10 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 Pfam PF00072 Response regulator receiver domain 5 113 1.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 SMART SM00448 3 114 4.2E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 SMART SM00382 164 307 1.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 Gene3D G3DSA:3.40.50.300 136 314 2.3E-57 T 14-10-2018 AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 SUPERFAMILY SSF52540 145 385 4.84E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 SUPERFAMILY SSF52172 4 188 5.27E-40 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 Gene3D G3DSA:1.10.8.60 315 381 6.4E-19 T 14-10-2018 AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 Pfam PF00158 Sigma-54 interaction domain 145 310 2.0E-63 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 Gene3D G3DSA:3.40.50.2300 2 135 3.2E-34 T 14-10-2018 AMBLS11_04075 3961874ac00335b65a53087791e46c59 391 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMBLS11_13700 b59b6b1c683aaac75599f53739094ea2 233 SMART SM00862 155 229 3.3E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_13700 b59b6b1c683aaac75599f53739094ea2 233 Gene3D G3DSA:1.10.10.10 129 232 1.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_13700 b59b6b1c683aaac75599f53739094ea2 233 Gene3D G3DSA:3.40.50.2300 5 128 1.5E-36 T 14-10-2018 AMBLS11_13700 b59b6b1c683aaac75599f53739094ea2 233 Pfam PF00072 Response regulator receiver domain 12 122 3.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13700 b59b6b1c683aaac75599f53739094ea2 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.2E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_13700 b59b6b1c683aaac75599f53739094ea2 233 SMART SM00448 10 122 7.2E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13700 b59b6b1c683aaac75599f53739094ea2 233 SUPERFAMILY SSF52172 9 190 8.68E-39 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_12855 ef0b9eaccf8f1c53e424940a476ba1dc 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 35.414 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMBLS11_12855 ef0b9eaccf8f1c53e424940a476ba1dc 372 SUPERFAMILY SSF56014 265 354 4.22E-14 T 14-10-2018 AMBLS11_12855 ef0b9eaccf8f1c53e424940a476ba1dc 372 Gene3D G3DSA:3.30.413.10 262 362 1.9E-25 T 14-10-2018 AMBLS11_12855 ef0b9eaccf8f1c53e424940a476ba1dc 372 PIRSF PIRSF004640 1 364 2.2E-148 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMBLS11_12855 ef0b9eaccf8f1c53e424940a476ba1dc 372 Pfam PF04551 GcpE protein 13 354 2.9E-135 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMBLS11_12855 ef0b9eaccf8f1c53e424940a476ba1dc 372 SUPERFAMILY SSF51604 40 139 8.83E-8 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMBLS11_12855 ef0b9eaccf8f1c53e424940a476ba1dc 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 1.2E-130 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMBLS11_12855 ef0b9eaccf8f1c53e424940a476ba1dc 372 Gene3D G3DSA:3.20.20.20 1 261 5.9E-108 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_07955 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_07955 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_07955 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_07955 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_04215 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_04215 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_04215 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_04215 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_16435 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_16435 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_16435 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_16435 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_17370 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_17370 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_17370 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_17370 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_00090 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_00090 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_00090 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_00090 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_02240 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_02240 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_02240 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_02240 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_02905 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_02905 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_02905 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_02905 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_17975 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_17975 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_17975 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_17975 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_14395 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_14395 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_14395 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_14395 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_12075 dec5b86d06b05569deef3f07545c7689 214 Gene3D G3DSA:3.30.420.10 48 201 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_12075 dec5b86d06b05569deef3f07545c7689 214 Pfam PF00665 Integrase core domain 51 165 4.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_12075 dec5b86d06b05569deef3f07545c7689 214 Pfam PF13276 HTH-like domain 3 28 4.6E-7 T 14-10-2018 IPR025948 HTH-like domain AMBLS11_12075 dec5b86d06b05569deef3f07545c7689 214 SUPERFAMILY SSF53098 47 205 2.12E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 SMART SM00073 5 102 1.3E-29 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 SMART SM00260 578 717 1.5E-31 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 SUPERFAMILY SSF55874 403 584 4.19E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 SUPERFAMILY SSF50341 585 716 2.35E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 505 2.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 2.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 2.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 2.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 SMART SM00387 446 586 6.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 339 401 2.0E-15 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 SUPERFAMILY SSF47226 5 129 2.49E-32 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 585 5.8E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 SMART SM01231 338 401 7.2E-19 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 Pfam PF01627 Hpt domain 10 99 2.0E-20 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 Gene3D G3DSA:1.10.287.560 338 401 1.1E-14 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 Gene3D G3DSA:2.30.30.40 586 712 3.0E-38 T 14-10-2018 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 Gene3D G3DSA:2.40.50.180 609 672 3.0E-38 T 14-10-2018 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 Gene3D G3DSA:1.20.120.160 1 141 1.7E-40 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 Pfam PF01584 CheW-like domain 591 717 4.1E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 Gene3D G3DSA:3.30.565.10 402 585 1.5E-57 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01505 d80dadd35fd3c8d813142bbf0a453e58 730 SUPERFAMILY SSF47384 340 402 1.96E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_01080 79fdb6f9255e481bc2b88d3e92f5b812 360 SUPERFAMILY SSF53335 193 339 7.71E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_01080 79fdb6f9255e481bc2b88d3e92f5b812 360 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 289 295 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMBLS11_01080 79fdb6f9255e481bc2b88d3e92f5b812 360 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 3 360 39.228 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 AMBLS11_01080 79fdb6f9255e481bc2b88d3e92f5b812 360 Gene3D G3DSA:3.40.50.150 1 175 1.2E-34 T 14-10-2018 AMBLS11_01080 79fdb6f9255e481bc2b88d3e92f5b812 360 Gene3D G3DSA:3.40.50.150 180 360 8.8E-40 T 14-10-2018 AMBLS11_01080 79fdb6f9255e481bc2b88d3e92f5b812 360 Pfam PF05175 Methyltransferase small domain 191 357 3.7E-51 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMBLS11_01080 79fdb6f9255e481bc2b88d3e92f5b812 360 Pfam PF08468 Methyltransferase small domain N-terminal 7 179 2.5E-29 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 Gene3D G3DSA:3.30.450.20 594 722 5.7E-8 T 14-10-2018 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 Pfam PF00072 Response regulator receiver domain 1058 1165 1.6E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 866 975 7.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 Gene3D G3DSA:3.40.50.2300 1052 1169 5.1E-13 T 14-10-2018 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 SUPERFAMILY SSF55874 812 975 1.83E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 SUPERFAMILY SSF52172 1054 1170 1.57E-12 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 PRINTS PR00344 Bacterial sensor protein C-terminal signature 906 920 4.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 PRINTS PR00344 Bacterial sensor protein C-terminal signature 924 934 4.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 PRINTS PR00344 Bacterial sensor protein C-terminal signature 963 976 4.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 PRINTS PR00344 Bacterial sensor protein C-terminal signature 939 957 4.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 Pfam PF00474 Sodium:solute symporter family 47 442 4.2E-7 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 SMART SM00387 865 979 2.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 Gene3D G3DSA:1.20.1730.10 43 524 3.4E-11 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 Gene3D G3DSA:1.10.287.130 723 819 1.7E-11 T 14-10-2018 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 SUPERFAMILY SSF47384 742 821 5.69E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 SMART SM00388 756 821 2.9E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 SMART SM00448 1055 1166 4.3E-4 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 Gene3D G3DSA:3.30.565.10 821 981 3.2E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06660 cad5d488e70149aec5c8957bad64893a 1171 Pfam PF12860 PAS fold 613 722 3.8E-36 T 14-10-2018 AMBLS11_04375 f3a2129e82b9fa2d2b4ca3bf58adb5f2 163 Pfam PF03918 Cytochrome C biogenesis protein 23 143 2.4E-46 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AMBLS11_04375 f3a2129e82b9fa2d2b4ca3bf58adb5f2 163 Gene3D G3DSA:1.10.8.640 35 120 3.9E-33 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 Gene3D G3DSA:3.20.20.80 137 580 1.1E-154 T 14-10-2018 AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 20 106 8.3E-16 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 Gene3D G3DSA:2.60.40.1180 586 688 1.3E-15 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 Pfam PF00128 Alpha amylase, catalytic domain 188 294 1.6E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 SUPERFAMILY SSF81296 16 137 6.72E-32 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 Gene3D G3DSA:2.60.40.10 12 135 6.8E-34 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 SUPERFAMILY SSF51011 587 688 1.65E-18 T 14-10-2018 AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 SUPERFAMILY SSF51445 133 572 1.89E-111 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 16 688 1.4E-235 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AMBLS11_10990 5852c8c262c1c54fb8b500cbe7281572 695 SMART SM00642 166 566 3.5E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 8 328 37.871 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 204 228 9.0E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 12 29 9.0E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 62 89 9.0E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 179 203 9.0E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 138 158 9.0E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 244 261 9.0E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 Gene3D G3DSA:1.10.1040.10 195 338 2.5E-52 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 9 164 8.1E-49 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 PIRSF PIRSF000114 2 338 9.0E-101 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 SUPERFAMILY SSF48179 185 337 7.14E-57 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 186 325 3.0E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 194 215 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 Gene3D G3DSA:3.40.50.720 1 193 1.1E-53 T 14-10-2018 AMBLS11_02160 500229f8208d78637a44473bc5536d2e 338 SUPERFAMILY SSF51735 10 184 1.17E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_10860 0f23314aa5940c754dd2dbfd452f27ca 103 SMART SM00418 21 99 2.5E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_10860 0f23314aa5940c754dd2dbfd452f27ca 103 Gene3D G3DSA:1.10.10.10 8 103 1.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_10860 0f23314aa5940c754dd2dbfd452f27ca 103 Pfam PF01022 Bacterial regulatory protein, arsR family 28 72 7.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_10860 0f23314aa5940c754dd2dbfd452f27ca 103 SUPERFAMILY SSF46785 16 102 1.17E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_10860 0f23314aa5940c754dd2dbfd452f27ca 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 53 2.0E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_10860 0f23314aa5940c754dd2dbfd452f27ca 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.0E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_10860 0f23314aa5940c754dd2dbfd452f27ca 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 2.0E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_10860 0f23314aa5940c754dd2dbfd452f27ca 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 2.0E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_13275 5511085472dbb898e92d44799fe5dc9e 836 Pfam PF00593 TonB dependent receptor 406 833 1.0E-20 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_13275 5511085472dbb898e92d44799fe5dc9e 836 Gene3D G3DSA:2.170.130.10 32 176 1.1E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_13275 5511085472dbb898e92d44799fe5dc9e 836 SUPERFAMILY SSF56935 37 835 1.68E-82 T 14-10-2018 AMBLS11_13275 5511085472dbb898e92d44799fe5dc9e 836 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 167 2.0E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 SUPERFAMILY SSF82866 294 493 7.98E-35 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 Gene3D G3DSA:3.30.70.1320 140 329 2.1E-275 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 SUPERFAMILY SSF82866 802 1027 6.67E-44 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 6.5E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 6.5E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 6.5E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.5E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 6.5E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 Gene3D G3DSA:1.20.1640.10 17 511 2.1E-275 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 SUPERFAMILY SSF82714 727 803 1.14E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 Gene3D G3DSA:3.30.70.1430 569 669 2.1E-275 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 Pfam PF00873 AcrB/AcrD/AcrF family 12 1025 1.9E-170 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 SUPERFAMILY SSF82693 47 139 2.2E-17 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 Gene3D G3DSA:3.30.70.1430 47 812 2.1E-275 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 SUPERFAMILY SSF82693 143 327 1.73E-14 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 Gene3D G3DSA:3.30.2090.10 181 272 2.1E-275 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 Gene3D G3DSA:3.30.70.1440 670 865 2.1E-275 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 SUPERFAMILY SSF82714 185 268 7.85E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 Gene3D G3DSA:1.20.1640.10 512 1022 2.1E-275 T 14-10-2018 AMBLS11_10435 d8c2536cc13d2d5b94e2199a53d8bb3c 1044 Gene3D G3DSA:3.30.2090.10 717 804 2.1E-275 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_09935 660144282b8beace604298df20092d5d 777 Gene3D G3DSA:3.20.20.450 524 777 2.1E-91 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_09935 660144282b8beace604298df20092d5d 777 PIRSF PIRSF005925 163 777 6.0E-160 T 14-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase AMBLS11_09935 660144282b8beace604298df20092d5d 777 Pfam PF00563 EAL domain 528 764 3.8E-73 T 14-10-2018 IPR001633 EAL domain AMBLS11_09935 660144282b8beace604298df20092d5d 777 SUPERFAMILY SSF55073 356 514 3.92E-50 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_09935 660144282b8beace604298df20092d5d 777 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 349 511 1.3E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_09935 660144282b8beace604298df20092d5d 777 SMART SM00065 198 348 1.3E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_09935 660144282b8beace604298df20092d5d 777 SMART SM00065 26 167 1.6E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_09935 660144282b8beace604298df20092d5d 777 SUPERFAMILY SSF141868 528 776 4.05E-83 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_09935 660144282b8beace604298df20092d5d 777 Gene3D G3DSA:3.30.450.40 9 166 3.5E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_09935 660144282b8beace604298df20092d5d 777 Pfam PF13185 GAF domain 197 339 1.3E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_09935 660144282b8beace604298df20092d5d 777 SMART SM00052 522 769 1.7E-96 T 14-10-2018 IPR001633 EAL domain AMBLS11_09935 660144282b8beace604298df20092d5d 777 Pfam PF01590 GAF domain 27 157 5.8E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_09935 660144282b8beace604298df20092d5d 777 Gene3D G3DSA:3.30.70.270 349 523 1.6E-63 T 14-10-2018 AMBLS11_09935 660144282b8beace604298df20092d5d 777 SUPERFAMILY SSF55781 164 340 3.27E-28 T 14-10-2018 AMBLS11_09935 660144282b8beace604298df20092d5d 777 SMART SM00267 340 512 5.5E-67 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_09935 660144282b8beace604298df20092d5d 777 Pfam PF00990 Diguanylate cyclase, GGDEF domain 351 507 2.3E-52 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_09935 660144282b8beace604298df20092d5d 777 Gene3D G3DSA:3.30.450.40 196 348 4.6E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_09935 660144282b8beace604298df20092d5d 777 SUPERFAMILY SSF55781 27 162 2.62E-26 T 14-10-2018 AMBLS11_03540 76ab3a5bab17fcbe1ade4aa681118930 210 SUPERFAMILY SSF52833 7 90 4.07E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_03540 76ab3a5bab17fcbe1ade4aa681118930 210 SUPERFAMILY SSF47616 82 205 7.67E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_03540 76ab3a5bab17fcbe1ade4aa681118930 210 Gene3D G3DSA:1.20.1050.10 89 192 9.7E-80 T 14-10-2018 AMBLS11_03540 76ab3a5bab17fcbe1ade4aa681118930 210 Gene3D G3DSA:3.40.30.10 11 200 9.7E-80 T 14-10-2018 AMBLS11_03540 76ab3a5bab17fcbe1ade4aa681118930 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 192 2.7E-11 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMBLS11_03540 76ab3a5bab17fcbe1ade4aa681118930 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 7.7E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 Pfam PF00970 Oxidoreductase FAD-binding domain 408 466 7.3E-6 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 Gene3D G3DSA:3.10.20.30 242 331 7.0E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 Gene3D G3DSA:3.40.50.80 468 609 3.3E-27 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 Pfam PF03929 PepSY-associated TM region 6 233 2.4E-7 T 14-10-2018 IPR005625 PepSY-associated TM protein AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 SUPERFAMILY SSF54292 242 326 2.94E-16 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 497 7.9E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 411 418 7.9E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 504 513 7.9E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 SUPERFAMILY SSF52343 457 602 2.36E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 Gene3D G3DSA:2.40.30.10 332 464 9.4E-27 T 14-10-2018 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 SUPERFAMILY SSF63380 335 469 1.11E-13 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 248 319 1.0E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 Pfam PF00175 Oxidoreductase NAD-binding domain 479 586 1.0E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 PRINTS PR00410 Phenol hydroxylase reductase family signature 478 497 1.9E-8 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 PRINTS PR00410 Phenol hydroxylase reductase family signature 411 418 1.9E-8 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_01240 e68bd564fb008e29776024fa840a35f8 612 PRINTS PR00410 Phenol hydroxylase reductase family signature 572 580 1.9E-8 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 Gene3D G3DSA:3.40.50.720 3 230 1.3E-61 T 14-10-2018 AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 215 1.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 SUPERFAMILY SSF51735 7 217 2.97E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_13515 afab1d2b0f1c621d21dde605765713c0 230 Pfam PF00106 short chain dehydrogenase 9 197 1.4E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_16215 3129199a81fc752e08adec99e05f70b0 296 SUPERFAMILY SSF53850 94 292 1.92E-18 T 14-10-2018 AMBLS11_16215 3129199a81fc752e08adec99e05f70b0 296 Gene3D G3DSA:1.10.10.10 3 94 1.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_16215 3129199a81fc752e08adec99e05f70b0 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.7E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_16215 3129199a81fc752e08adec99e05f70b0 296 SUPERFAMILY SSF46785 2 85 7.26E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_16215 3129199a81fc752e08adec99e05f70b0 296 Gene3D G3DSA:3.40.190.290 95 294 1.7E-10 T 14-10-2018 AMBLS11_16215 3129199a81fc752e08adec99e05f70b0 296 Pfam PF03466 LysR substrate binding domain 95 291 5.9E-8 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 Gene3D G3DSA:3.40.50.11610 727 933 1.5E-170 T 14-10-2018 AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 SUPERFAMILY SSF52518 580 797 2.65E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 Gene3D G3DSA:3.40.50.12470 560 806 1.5E-170 T 14-10-2018 AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 Pfam PF02779 Transketolase, pyrimidine binding domain 597 791 1.1E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 PIRSF PIRSF000157 1 938 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 Gene3D G3DSA:3.40.50.970 172 537 4.7E-146 T 14-10-2018 AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 6.1E-18 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 SMART SM00861 597 790 4.8E-61 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 SUPERFAMILY SSF52518 125 550 1.44E-86 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 Gene3D G3DSA:1.10.287.1150 90 171 2.0E-26 T 14-10-2018 AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 Pfam PF00676 Dehydrogenase E1 component 220 521 5.5E-52 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMBLS11_08910 c20de915304d425f6adb953b90c09013 939 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 794 936 3.7E-53 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMBLS11_04130 6caf611736e91fef8cdc8300b4b50ed0 219 SUPERFAMILY SSF54001 13 194 4.37E-19 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMBLS11_04130 6caf611736e91fef8cdc8300b4b50ed0 219 Gene3D G3DSA:3.90.1720.10 1 192 8.0E-22 T 14-10-2018 AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 Gene3D G3DSA:3.40.50.300 275 541 2.5E-51 T 14-10-2018 AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 Gene3D G3DSA:3.40.50.300 3 274 6.9E-56 T 14-10-2018 AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 Pfam PF12848 ABC transporter 218 291 6.6E-27 T 14-10-2018 IPR032781 ABC-transporter extension domain AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 SUPERFAMILY SSF52540 294 508 1.61E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 Pfam PF00005 ABC transporter 328 459 3.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 SMART SM00382 26 223 4.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 SMART SM00382 337 503 6.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 Pfam PF00005 ABC transporter 18 178 1.4E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_18355 136cbfd5568620d8f02ca8dc43266d0c 657 SUPERFAMILY SSF52540 2 243 8.12E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10010 f8f5acfb5af0afa7675885b717390118 467 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 39 372 2.2E-63 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 SUPERFAMILY SSF47240 1 153 2.5E-47 T 14-10-2018 IPR009078 Ferritin-like superfamily AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 PIRSF PIRSF002560 1 157 1.4E-64 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 Pfam PF00210 Ferritin-like domain 9 137 1.2E-33 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.3E-60 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.3E-60 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.3E-60 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.3E-60 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.3E-60 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.3E-60 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.3E-60 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 3.1E-68 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09495 832c44caaa1b57116559d5c3d28deaa7 158 Gene3D G3DSA:1.20.1260.10 1 157 5.7E-63 T 14-10-2018 IPR012347 Ferritin-like AMBLS11_12715 ae0f26ce2ed2f911d79a07328e08ef64 391 Gene3D G3DSA:3.30.70.360 189 302 4.8E-107 T 14-10-2018 AMBLS11_12715 ae0f26ce2ed2f911d79a07328e08ef64 391 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 12 390 43.808 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMBLS11_12715 ae0f26ce2ed2f911d79a07328e08ef64 391 Pfam PF07687 Peptidase dimerisation domain 185 291 1.9E-21 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMBLS11_12715 ae0f26ce2ed2f911d79a07328e08ef64 391 Gene3D G3DSA:3.40.630.10 19 377 4.8E-107 T 14-10-2018 AMBLS11_12715 ae0f26ce2ed2f911d79a07328e08ef64 391 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 15 386 3.6E-118 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMBLS11_12715 ae0f26ce2ed2f911d79a07328e08ef64 391 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMBLS11_12715 ae0f26ce2ed2f911d79a07328e08ef64 391 Pfam PF01546 Peptidase family M20/M25/M40 72 385 3.9E-38 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMBLS11_12715 ae0f26ce2ed2f911d79a07328e08ef64 391 SUPERFAMILY SSF53187 6 388 9.31E-55 T 14-10-2018 AMBLS11_12715 ae0f26ce2ed2f911d79a07328e08ef64 391 SUPERFAMILY SSF55031 189 295 1.05E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMBLS11_00760 2f7a1cc3979a6ad9f08a888dcec8cfa1 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 4.3E-78 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMBLS11_00760 2f7a1cc3979a6ad9f08a888dcec8cfa1 723 Gene3D G3DSA:3.40.50.300 10 273 6.9E-102 T 14-10-2018 AMBLS11_00760 2f7a1cc3979a6ad9f08a888dcec8cfa1 723 SUPERFAMILY SSF52540 6 643 3.78E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00760 2f7a1cc3979a6ad9f08a888dcec8cfa1 723 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 6.3E-76 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMBLS11_00760 2f7a1cc3979a6ad9f08a888dcec8cfa1 723 Gene3D G3DSA:1.10.486.10 383 539 6.3E-128 T 14-10-2018 AMBLS11_00760 2f7a1cc3979a6ad9f08a888dcec8cfa1 723 Gene3D G3DSA:3.40.50.300 282 637 6.3E-128 T 14-10-2018 AMBLS11_00760 2f7a1cc3979a6ad9f08a888dcec8cfa1 723 Gene3D G3DSA:1.10.10.160 114 187 6.9E-102 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMBLS11_00760 2f7a1cc3979a6ad9f08a888dcec8cfa1 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 721 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AMBLS11_00175 5d85bfb204ba241a69362b3fcdb84761 276 Gene3D G3DSA:3.40.190.10 40 246 1.7E-9 T 14-10-2018 AMBLS11_00175 5d85bfb204ba241a69362b3fcdb84761 276 Gene3D G3DSA:3.40.190.10 121 212 1.7E-9 T 14-10-2018 AMBLS11_00175 5d85bfb204ba241a69362b3fcdb84761 276 SUPERFAMILY SSF53850 29 249 3.38E-16 T 14-10-2018 AMBLS11_05360 a401bf880f25872639af8a6d7103bab8 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 156 2.3E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_05360 a401bf880f25872639af8a6d7103bab8 696 SUPERFAMILY SSF56935 33 696 3.19E-82 T 14-10-2018 AMBLS11_05360 a401bf880f25872639af8a6d7103bab8 696 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 679 696 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site AMBLS11_05360 a401bf880f25872639af8a6d7103bab8 696 Gene3D G3DSA:2.40.170.20 44 696 5.0E-104 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_05360 a401bf880f25872639af8a6d7103bab8 696 Pfam PF00593 TonB dependent receptor 237 694 8.8E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 SUPERFAMILY SSF54862 450 549 7.82E-29 T 14-10-2018 AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 SUPERFAMILY SSF51905 4 448 5.9E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.5E-5 T 14-10-2018 AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 Gene3D G3DSA:3.30.70.20 451 544 1.8E-39 T 14-10-2018 AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 4.5E-6 T 14-10-2018 AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 4.5E-6 T 14-10-2018 AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 Gene3D G3DSA:3.30.9.90 79 450 2.3E-200 T 14-10-2018 AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 Gene3D G3DSA:3.50.50.60 7 386 2.3E-200 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 SUPERFAMILY SSF54373 211 305 2.24E-35 T 14-10-2018 AMBLS11_10460 ad5be0b0e2be2bf558b5d82da225e46d 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 546 2.4E-51 T 14-10-2018 AMBLS11_13210 09fd8f0cd22d58deb92bd61b0043cb1b 354 Gene3D G3DSA:3.40.50.300 26 184 6.2E-12 T 14-10-2018 AMBLS11_13210 09fd8f0cd22d58deb92bd61b0043cb1b 354 SMART SM00382 42 204 0.0015 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_13210 09fd8f0cd22d58deb92bd61b0043cb1b 354 SUPERFAMILY SSF52540 5 264 1.25E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13210 09fd8f0cd22d58deb92bd61b0043cb1b 354 Pfam PF13401 AAA domain 42 170 6.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_13210 09fd8f0cd22d58deb92bd61b0043cb1b 354 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 268 2.0E-109 T 14-10-2018 IPR017466 ATPase, secretion system, PEP-CTERM, predicted AMBLS11_03275 b933c539f18dabd36b1d757424e0526f 381 Pfam PF08495 FIST N domain 28 216 1.0E-31 T 14-10-2018 IPR013702 FIST domain, N-terminal AMBLS11_03275 b933c539f18dabd36b1d757424e0526f 381 SMART SM00897 25 217 5.2E-40 T 14-10-2018 IPR013702 FIST domain, N-terminal AMBLS11_03275 b933c539f18dabd36b1d757424e0526f 381 Pfam PF10442 FIST C domain 218 357 3.0E-28 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMBLS11_03275 b933c539f18dabd36b1d757424e0526f 381 SMART SM01204 218 359 5.4E-37 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 Gene3D G3DSA:2.40.30.10 237 326 3.5E-27 T 14-10-2018 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 1.5E-198 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 Gene3D G3DSA:3.40.50.300 1 236 1.3E-75 T 14-10-2018 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 470 53.02 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 SUPERFAMILY SSF50465 331 431 8.15E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 Gene3D G3DSA:2.40.30.10 327 432 2.0E-35 T 14-10-2018 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 Pfam PF00009 Elongation factor Tu GTP binding domain 23 228 4.4E-45 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 SUPERFAMILY SSF50447 237 327 7.29E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 210 1.2E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 PRINTS PR00315 GTP-binding elongation factor signature 123 134 1.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 PRINTS PR00315 GTP-binding elongation factor signature 26 39 1.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 PRINTS PR00315 GTP-binding elongation factor signature 160 169 1.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 PRINTS PR00315 GTP-binding elongation factor signature 107 117 1.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05785 2625d8685f7be35f515f371df1453455 471 SUPERFAMILY SSF52540 17 233 8.65E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08085 0230ce2f9f302cebe579968af1406154 133 SUPERFAMILY SSF89919 3 115 3.14E-29 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AMBLS11_08085 0230ce2f9f302cebe579968af1406154 133 Pfam PF02033 Ribosome-binding factor A 7 112 1.7E-28 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMBLS11_08085 0230ce2f9f302cebe579968af1406154 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 4.5E-32 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMBLS11_08085 0230ce2f9f302cebe579968af1406154 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 113 24.642 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMBLS11_08085 0230ce2f9f302cebe579968af1406154 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 2.0E-21 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMBLS11_08085 0230ce2f9f302cebe579968af1406154 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AMBLS11_08085 0230ce2f9f302cebe579968af1406154 133 Gene3D G3DSA:3.30.300.20 1 108 2.3E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMBLS11_14555 cd255daba8ea014d3312840a5e5d6c6d 175 SUPERFAMILY SSF48008 78 169 6.54E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMBLS11_14555 cd255daba8ea014d3312840a5e5d6c6d 175 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 73 1.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_14555 cd255daba8ea014d3312840a5e5d6c6d 175 Pfam PF07729 FCD domain 83 166 1.4E-13 T 14-10-2018 IPR011711 GntR, C-terminal AMBLS11_14555 cd255daba8ea014d3312840a5e5d6c6d 175 SMART SM00345 15 73 2.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_14555 cd255daba8ea014d3312840a5e5d6c6d 175 Gene3D G3DSA:1.20.120.530 82 174 1.1E-15 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMBLS11_14555 cd255daba8ea014d3312840a5e5d6c6d 175 Gene3D G3DSA:1.10.10.10 3 73 2.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_14555 cd255daba8ea014d3312840a5e5d6c6d 175 SMART SM00895 83 171 6.1E-8 T 14-10-2018 IPR011711 GntR, C-terminal AMBLS11_14555 cd255daba8ea014d3312840a5e5d6c6d 175 SUPERFAMILY SSF46785 10 101 8.65E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.3E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 Pfam PF00106 short chain dehydrogenase 8 202 1.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 SUPERFAMILY SSF51735 2 201 3.3E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_13510 b11ce17842b172bb44cc95c5ce2b7272 295 Gene3D G3DSA:3.40.50.720 2 287 7.1E-74 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 Gene3D G3DSA:3.30.70.1430 38 802 1.5E-236 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 Pfam PF00873 AcrB/AcrD/AcrF family 1 1010 4.3E-155 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 SUPERFAMILY SSF82866 791 1012 3.01E-41 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 Gene3D G3DSA:1.20.1640.10 8 502 1.5E-236 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 SUPERFAMILY SSF82866 291 488 1.14E-35 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 4.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 4.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 4.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 Gene3D G3DSA:3.30.70.1430 554 652 1.5E-236 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 SUPERFAMILY SSF82693 134 322 6.98E-17 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 SUPERFAMILY SSF82693 38 133 1.31E-20 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 Gene3D G3DSA:3.30.2090.10 704 794 1.5E-236 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 SUPERFAMILY SSF82714 714 787 2.09E-6 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 Gene3D G3DSA:3.30.70.1320 134 325 1.5E-236 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 Gene3D G3DSA:1.20.1640.10 503 1005 1.5E-236 T 14-10-2018 AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 SUPERFAMILY SSF82714 182 262 3.27E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 Gene3D G3DSA:3.30.2090.10 177 267 1.5E-236 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_07100 ceb00c11da744f24d36f3b3bf0b52c42 1019 Gene3D G3DSA:3.30.70.1440 653 854 1.5E-236 T 14-10-2018 AMBLS11_12570 1d35d6496587dab4679df24116f716c6 348 SUPERFAMILY SSF101790 256 337 2.94E-18 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMBLS11_12570 1d35d6496587dab4679df24116f716c6 348 PIRSF PIRSF006487 14 300 1.7E-10 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMBLS11_12570 1d35d6496587dab4679df24116f716c6 348 SUPERFAMILY SSF103025 11 255 1.11E-38 T 14-10-2018 AMBLS11_12570 1d35d6496587dab4679df24116f716c6 348 Gene3D G3DSA:3.30.70.1400 22 106 9.0E-18 T 14-10-2018 AMBLS11_12570 1d35d6496587dab4679df24116f716c6 348 Gene3D G3DSA:2.40.30.160 210 327 6.9E-34 T 14-10-2018 AMBLS11_12570 1d35d6496587dab4679df24116f716c6 348 Pfam PF01571 Aminomethyltransferase folate-binding domain 24 124 2.4E-6 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMBLS11_12570 1d35d6496587dab4679df24116f716c6 348 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 202 264 4.3E-21 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site AMBLS11_00015 01bf7ccb4dfd12e67cb33eb9c645713e 362 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 345 4.0E-27 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMBLS11_00015 01bf7ccb4dfd12e67cb33eb9c645713e 362 SUPERFAMILY SSF52540 1 338 2.74E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00015 01bf7ccb4dfd12e67cb33eb9c645713e 362 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 358 2.5E-95 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMBLS11_00015 01bf7ccb4dfd12e67cb33eb9c645713e 362 Gene3D G3DSA:3.40.50.300 7 335 2.2E-83 T 14-10-2018 AMBLS11_00015 01bf7ccb4dfd12e67cb33eb9c645713e 362 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 362 84.503 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMBLS11_00015 01bf7ccb4dfd12e67cb33eb9c645713e 362 ProSitePatterns PS00618 RecF protein signature 2. 301 319 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMBLS11_00015 01bf7ccb4dfd12e67cb33eb9c645713e 362 Gene3D G3DSA:1.20.1050.90 121 300 2.2E-83 T 14-10-2018 AMBLS11_03550 9594bf6c3c6e74cf2f8730f96e4b0ff8 276 Pfam PF06468 Spondin_N 75 198 5.5E-6 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AMBLS11_03550 9594bf6c3c6e74cf2f8730f96e4b0ff8 276 Gene3D G3DSA:2.60.40.2130 58 207 6.0E-8 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AMBLS11_02315 eb10f7833b3548e75af5a8b7593ca03a 429 SMART SM00490 270 351 5.5E-32 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_02315 eb10f7833b3548e75af5a8b7593ca03a 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMBLS11_02315 eb10f7833b3548e75af5a8b7593ca03a 429 SMART SM00487 27 234 1.0E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_02315 eb10f7833b3548e75af5a8b7593ca03a 429 Gene3D G3DSA:3.40.50.300 2 222 6.9E-70 T 14-10-2018 AMBLS11_02315 eb10f7833b3548e75af5a8b7593ca03a 429 Pfam PF00270 DEAD/DEAH box helicase 32 207 2.8E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_02315 eb10f7833b3548e75af5a8b7593ca03a 429 Gene3D G3DSA:3.40.50.300 225 386 3.8E-48 T 14-10-2018 AMBLS11_02315 eb10f7833b3548e75af5a8b7593ca03a 429 Pfam PF00271 Helicase conserved C-terminal domain 242 351 4.3E-30 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_02315 eb10f7833b3548e75af5a8b7593ca03a 429 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 7 389 50.678 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AMBLS11_02315 eb10f7833b3548e75af5a8b7593ca03a 429 SUPERFAMILY SSF52540 83 363 1.99E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02735 136bb011a6a276ee0fbc030597e750cf 356 SMART SM00448 3 115 7.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02735 136bb011a6a276ee0fbc030597e750cf 356 Gene3D G3DSA:3.40.50.2300 2 128 1.9E-29 T 14-10-2018 AMBLS11_02735 136bb011a6a276ee0fbc030597e750cf 356 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02735 136bb011a6a276ee0fbc030597e750cf 356 SUPERFAMILY SSF52172 4 118 1.71E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_02735 136bb011a6a276ee0fbc030597e750cf 356 SUPERFAMILY SSF103039 153 343 4.19E-42 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_02735 136bb011a6a276ee0fbc030597e750cf 356 Gene3D G3DSA:3.40.1550.10 152 349 1.0E-38 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_00625 c5ec0a6c30a5b0b3a672b2f45f7435e7 395 SUPERFAMILY SSF54975 2 123 2.58E-30 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMBLS11_00625 c5ec0a6c30a5b0b3a672b2f45f7435e7 395 SMART SM00052 142 383 4.9E-35 T 14-10-2018 IPR001633 EAL domain AMBLS11_00625 c5ec0a6c30a5b0b3a672b2f45f7435e7 395 Pfam PF00563 EAL domain 156 378 1.5E-47 T 14-10-2018 IPR001633 EAL domain AMBLS11_00625 c5ec0a6c30a5b0b3a672b2f45f7435e7 395 Gene3D G3DSA:3.30.70.3200 1 137 4.9E-35 T 14-10-2018 AMBLS11_00625 c5ec0a6c30a5b0b3a672b2f45f7435e7 395 SMART SM01034 2 94 1.2E-29 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AMBLS11_00625 c5ec0a6c30a5b0b3a672b2f45f7435e7 395 SUPERFAMILY SSF141868 156 378 1.31E-53 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00625 c5ec0a6c30a5b0b3a672b2f45f7435e7 395 Pfam PF04940 Sensors of blue-light using FAD 2 92 1.2E-27 T 14-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AMBLS11_00625 c5ec0a6c30a5b0b3a672b2f45f7435e7 395 Gene3D G3DSA:3.20.20.450 138 391 7.4E-67 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_08240 eb3fde4e2895ae0d3b6b503a72c936f7 328 Gene3D G3DSA:1.10.10.60 213 327 4.9E-16 T 14-10-2018 AMBLS11_08240 eb3fde4e2895ae0d3b6b503a72c936f7 328 Pfam PF12833 Helix-turn-helix domain 244 320 5.7E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_08240 eb3fde4e2895ae0d3b6b503a72c936f7 328 SMART SM00342 237 320 2.9E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_08240 eb3fde4e2895ae0d3b6b503a72c936f7 328 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 38 195 7.7E-26 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AMBLS11_08240 eb3fde4e2895ae0d3b6b503a72c936f7 328 SUPERFAMILY SSF46689 273 322 1.52E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_17620 94a44f3a808a2f3e3eab8cb79b1c645c 293 SUPERFAMILY SSF89392 126 280 8.63E-6 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMBLS11_17620 94a44f3a808a2f3e3eab8cb79b1c645c 293 Gene3D G3DSA:2.50.20.10 42 285 6.2E-54 T 14-10-2018 AMBLS11_17620 94a44f3a808a2f3e3eab8cb79b1c645c 293 Pfam PF17131 Outer membrane lipoprotein-sorting protein 105 285 7.8E-48 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 SUPERFAMILY SSF53244 364 516 8.77E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 SUPERFAMILY SSF63418 12 107 1.31E-18 T 14-10-2018 IPR035911 MurE/MurF, N-terminal AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 Gene3D G3DSA:3.90.190.20 374 521 1.1E-53 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 515 2.5E-148 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 8 516 32.27 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 SUPERFAMILY SSF53623 109 362 1.09E-64 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 Gene3D G3DSA:3.40.1390.10 7 107 1.7E-25 T 14-10-2018 AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 Gene3D G3DSA:3.40.1190.10 109 367 7.0E-70 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 Pfam PF08245 Mur ligase middle domain 118 343 6.6E-45 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 Pfam PF01225 Mur ligase family, catalytic domain 26 106 2.3E-13 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMBLS11_14065 dcb75e424cf246afff742dd61f0d822c 521 Pfam PF02875 Mur ligase family, glutamate ligase domain 364 449 1.5E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMBLS11_05350 1514ce20a31f6d10572052e01d91ecaf 753 Gene3D G3DSA:3.40.630.30 404 608 3.4E-50 T 14-10-2018 AMBLS11_05350 1514ce20a31f6d10572052e01d91ecaf 753 Gene3D G3DSA:3.40.50.12320 219 392 2.1E-29 T 14-10-2018 AMBLS11_05350 1514ce20a31f6d10572052e01d91ecaf 753 SUPERFAMILY SSF55729 437 591 1.98E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_05350 1514ce20a31f6d10572052e01d91ecaf 753 Pfam PF13718 GNAT acetyltransferase 2 442 562 6.5E-12 T 14-10-2018 IPR000182 GNAT domain AMBLS11_05350 1514ce20a31f6d10572052e01d91ecaf 753 Gene3D G3DSA:3.40.50.11040 27 205 4.1E-19 T 14-10-2018 AMBLS11_05350 1514ce20a31f6d10572052e01d91ecaf 753 Pfam PF05127 Helicase 223 401 2.2E-37 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AMBLS11_05350 1514ce20a31f6d10572052e01d91ecaf 753 Pfam PF08351 Domain of unknown function (DUF1726) 84 167 1.0E-8 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 AMBLS11_05350 1514ce20a31f6d10572052e01d91ecaf 753 SUPERFAMILY SSF52540 195 348 2.54E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06725 6394e327c60385cc07900fe00eb46eda 179 Gene3D G3DSA:3.90.79.10 2 176 9.7E-40 T 14-10-2018 AMBLS11_06725 6394e327c60385cc07900fe00eb46eda 179 Pfam PF00293 NUDIX domain 44 152 4.3E-6 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMBLS11_06725 6394e327c60385cc07900fe00eb46eda 179 SUPERFAMILY SSF55811 4 176 3.11E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_03595 7656850d84a1cc83d3c7ea1ff8d94880 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_03595 7656850d84a1cc83d3c7ea1ff8d94880 241 Pfam PF00005 ABC transporter 20 166 2.7E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_03595 7656850d84a1cc83d3c7ea1ff8d94880 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 4.6E-124 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AMBLS11_03595 7656850d84a1cc83d3c7ea1ff8d94880 241 Gene3D G3DSA:3.40.50.300 2 241 3.0E-71 T 14-10-2018 AMBLS11_03595 7656850d84a1cc83d3c7ea1ff8d94880 241 SMART SM00382 28 231 3.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_03595 7656850d84a1cc83d3c7ea1ff8d94880 241 SUPERFAMILY SSF52540 4 237 4.55E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_03595 7656850d84a1cc83d3c7ea1ff8d94880 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 7.9E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMBLS11_00105 595b7c6f7578e84b134b01a974b2e4d8 316 Pfam PF00551 Formyl transferase 7 184 2.2E-53 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_00105 595b7c6f7578e84b134b01a974b2e4d8 316 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 308 1.1E-108 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AMBLS11_00105 595b7c6f7578e84b134b01a974b2e4d8 316 SUPERFAMILY SSF50486 206 309 1.73E-33 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AMBLS11_00105 595b7c6f7578e84b134b01a974b2e4d8 316 Gene3D G3DSA:3.10.25.10 208 312 7.1E-36 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_00105 595b7c6f7578e84b134b01a974b2e4d8 316 Gene3D G3DSA:3.40.50.170 1 207 1.6E-85 T 14-10-2018 AMBLS11_00105 595b7c6f7578e84b134b01a974b2e4d8 316 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_00105 595b7c6f7578e84b134b01a974b2e4d8 316 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 305 37.503 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AMBLS11_00105 595b7c6f7578e84b134b01a974b2e4d8 316 SUPERFAMILY SSF53328 4 205 4.97E-68 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_00105 595b7c6f7578e84b134b01a974b2e4d8 316 Pfam PF02911 Formyl transferase, C-terminal domain 205 301 4.5E-29 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_04730 210201312b3b9b63e4166715dbe9da2b 228 Gene3D G3DSA:2.30.30.910 88 221 1.1E-35 T 14-10-2018 AMBLS11_04730 210201312b3b9b63e4166715dbe9da2b 228 Pfam PF13861 FlgD Tudor-like domain 87 223 1.2E-16 T 14-10-2018 IPR025963 FlgD Tudor-like domain AMBLS11_04730 210201312b3b9b63e4166715dbe9da2b 228 Pfam PF13860 FlgD Ig-like domain 122 180 1.5E-18 T 14-10-2018 IPR025965 FlgD Ig-like domain AMBLS11_04730 210201312b3b9b63e4166715dbe9da2b 228 Pfam PF03963 Flagellar hook capping protein - N-terminal region 17 79 2.5E-20 T 14-10-2018 IPR005648 Flagellar hook capping protein AMBLS11_04730 210201312b3b9b63e4166715dbe9da2b 228 Gene3D G3DSA:2.60.40.4070 104 191 1.1E-35 T 14-10-2018 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 PIRSF PIRSF005499 21 724 5.7E-298 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Pfam PF00013 KH domain 576 633 2.4E-9 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Pfam PF03725 3' exoribonuclease family, domain 2 167 230 9.2E-12 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Pfam PF03725 3' exoribonuclease family, domain 2 480 549 6.5E-5 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 261 340 4.4E-20 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Pfam PF01138 3' exoribonuclease family, domain 1 344 476 1.2E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Pfam PF01138 3' exoribonuclease family, domain 1 36 164 3.3E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 SMART SM00316 640 710 8.2E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 SUPERFAMILY SSF54211 22 164 1.11E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 SUPERFAMILY SSF50249 629 715 7.2E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 SUPERFAMILY SSF54791 574 642 6.73E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 SUPERFAMILY SSF55666 470 569 9.54E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 30 711 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 SMART SM00322 572 637 6.0E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 SUPERFAMILY SSF54211 313 508 2.02E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Gene3D G3DSA:3.30.230.70 252 569 5.1E-116 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Gene3D G3DSA:2.40.50.140 642 713 7.3E-29 T 14-10-2018 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Gene3D G3DSA:3.30.230.70 10 250 1.9E-79 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 SUPERFAMILY SSF55666 165 255 1.25E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Gene3D G3DSA:3.30.1370.10 570 641 3.6E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 SUPERFAMILY SSF46915 259 340 1.7E-18 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 23 713 30.243 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMBLS11_08635 32a8d8de1039d16d8011355b6c3dd8d6 724 Pfam PF00575 S1 RNA binding domain 639 710 2.1E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_05525 54730170f430fd00055fc3a07c25b6b8 248 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 128 144 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMBLS11_05525 54730170f430fd00055fc3a07c25b6b8 248 Gene3D G3DSA:3.30.160.20 109 204 8.4E-98 T 14-10-2018 AMBLS11_05525 54730170f430fd00055fc3a07c25b6b8 248 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 246 3.3E-139 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMBLS11_05525 54730170f430fd00055fc3a07c25b6b8 248 Pfam PF00472 RF-1 domain 111 220 6.4E-43 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMBLS11_05525 54730170f430fd00055fc3a07c25b6b8 248 SMART SM00937 1 78 1.3E-29 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMBLS11_05525 54730170f430fd00055fc3a07c25b6b8 248 Gene3D G3DSA:3.30.70.1660 13 241 8.4E-98 T 14-10-2018 AMBLS11_05525 54730170f430fd00055fc3a07c25b6b8 248 Pfam PF03462 PCRF domain 4 102 3.5E-42 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMBLS11_05525 54730170f430fd00055fc3a07c25b6b8 248 SUPERFAMILY SSF75620 1 245 6.93E-118 T 14-10-2018 AMBLS11_10075 c639f3cd3a3446c11a80749d61743cf5 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 192 4.2E-38 T 14-10-2018 AMBLS11_10075 c639f3cd3a3446c11a80749d61743cf5 223 SUPERFAMILY SSF56784 2 219 1.44E-61 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_10075 c639f3cd3a3446c11a80749d61743cf5 223 Gene3D G3DSA:1.10.150.240 19 92 5.1E-68 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMBLS11_10075 c639f3cd3a3446c11a80749d61743cf5 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 186 1.1E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_10075 c639f3cd3a3446c11a80749d61743cf5 223 Gene3D G3DSA:3.40.50.1000 8 215 5.1E-68 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_10075 c639f3cd3a3446c11a80749d61743cf5 223 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 219 7.6E-66 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AMBLS11_10075 c639f3cd3a3446c11a80749d61743cf5 223 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 33.41 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AMBLS11_10075 c639f3cd3a3446c11a80749d61743cf5 223 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 90 190 3.3E-12 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AMBLS11_10075 c639f3cd3a3446c11a80749d61743cf5 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 192 6.1E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Gene3D G3DSA:3.40.50.670 702 805 1.7E-26 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Pfam PF01751 Toprim domain 421 533 6.7E-19 T 14-10-2018 IPR006171 TOPRIM domain AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 806 107.681 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Gene3D G3DSA:3.10.20.690 594 685 2.8E-20 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 SUPERFAMILY SSF54211 222 394 9.29E-61 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Gene3D G3DSA:3.30.230.10 222 394 2.6E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 SUPERFAMILY SSF55874 6 219 1.96E-74 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 SMART SM00387 33 177 2.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 759 771 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 314 330 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 362 376 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 244 262 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 197 210 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 182 197 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 7 17 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 472 481 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 775 791 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 221 243 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR01159 DNA gyrase subunit B signature 376 396 8.0E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 SUPERFAMILY SSF56719 396 796 2.25E-87 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR00418 DNA topoisomerase II family signature 489 505 7.9E-71 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR00418 DNA topoisomerase II family signature 115 129 7.9E-71 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR00418 DNA topoisomerase II family signature 270 283 7.9E-71 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR00418 DNA topoisomerase II family signature 738 754 7.9E-71 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR00418 DNA topoisomerase II family signature 422 436 7.9E-71 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR00418 DNA topoisomerase II family signature 37 52 7.9E-71 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR00418 DNA topoisomerase II family signature 507 524 7.9E-71 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR00418 DNA topoisomerase II family signature 72 85 7.9E-71 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 PRINTS PR00418 DNA topoisomerase II family signature 527 539 7.9E-71 T 14-10-2018 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Gene3D G3DSA:3.40.50.670 400 581 9.4E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 174 1.9E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 SMART SM00433 37 799 3.1E-274 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 806 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Pfam PF00204 DNA gyrase B 222 392 7.7E-61 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Gene3D G3DSA:3.30.565.10 3 221 4.2E-94 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_00020 12d10092fc907f762d93c62acc47adec 806 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 795 1.6E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SUPERFAMILY SSF55781 416 594 6.54E-12 T 14-10-2018 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SUPERFAMILY SSF55073 623 775 8.63E-39 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Gene3D G3DSA:3.30.450.20 297 418 4.3E-26 T 14-10-2018 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SUPERFAMILY SSF55785 309 422 1.74E-20 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SUPERFAMILY SSF55781 39 176 2.28E-18 T 14-10-2018 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SUPERFAMILY SSF55785 189 293 6.12E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SMART SM00091 304 372 0.014 T 14-10-2018 IPR000014 PAS domain AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SMART SM00091 175 245 32.0 T 14-10-2018 IPR000014 PAS domain AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Pfam PF08447 PAS fold 328 416 5.6E-18 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SMART SM00065 451 608 0.0079 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SMART SM00065 34 175 0.0027 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Pfam PF13185 GAF domain 454 595 5.6E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Gene3D G3DSA:3.30.70.270 610 775 2.3E-47 T 14-10-2018 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Gene3D G3DSA:3.30.450.40 420 609 2.3E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Gene3D G3DSA:3.30.450.40 31 174 2.2E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SMART SM00267 607 776 2.2E-48 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 303 426 4.7E-13 T 14-10-2018 IPR000014 PAS domain AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Pfam PF00990 Diguanylate cyclase, GGDEF domain 618 772 1.9E-35 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Pfam PF13426 PAS domain 193 290 0.052 T 14-10-2018 IPR000014 PAS domain AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 615 774 4.1E-41 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Pfam PF01590 GAF domain 81 165 3.0E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 SMART SM00086 379 422 1.4E-9 T 14-10-2018 IPR001610 PAC motif AMBLS11_18655 86a2754f9723044fc4dc415b1a4e560b 777 Gene3D G3DSA:3.30.450.20 175 294 2.8E-7 T 14-10-2018 AMBLS11_13245 3deead3dead367320cdb12b5113c48dc 176 Pfam PF01389 OmpA-like transmembrane domain 35 157 1.0E-5 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AMBLS11_13245 3deead3dead367320cdb12b5113c48dc 176 SUPERFAMILY SSF56925 24 175 4.97E-11 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMBLS11_13245 3deead3dead367320cdb12b5113c48dc 176 Gene3D G3DSA:2.40.160.20 12 176 6.1E-13 T 14-10-2018 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SUPERFAMILY SSF58104 439 720 7.32E-75 T 14-10-2018 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 Gene3D G3DSA:1.10.287.950 425 721 2.9E-87 T 14-10-2018 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SMART SM00304 374 426 1.0E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SMART SM00304 427 471 10.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SMART SM00283 472 719 1.2E-88 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SUPERFAMILY SSF55785 272 379 5.06E-26 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 Pfam PF13426 PAS domain 31 135 6.3E-4 T 14-10-2018 IPR000014 PAS domain AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 Gene3D G3DSA:3.30.450.20 17 132 3.7E-35 T 14-10-2018 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 255 9.4E-13 T 14-10-2018 IPR000014 PAS domain AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 270 379 1.1E-18 T 14-10-2018 IPR000014 PAS domain AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SUPERFAMILY SSF55785 149 251 1.06E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 599 628 7.4E-56 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 570 597 7.4E-56 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 647 676 7.4E-56 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 493 522 7.4E-56 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SMART SM00091 20 85 10.0 T 14-10-2018 IPR000014 PAS domain AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SMART SM00091 259 329 1.7 T 14-10-2018 IPR000014 PAS domain AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SMART SM00091 137 210 7.5 T 14-10-2018 IPR000014 PAS domain AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SMART SM00086 212 254 0.037 T 14-10-2018 IPR001610 PAC motif AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 SMART SM00086 334 376 2.2E-5 T 14-10-2018 IPR001610 PAC motif AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 Pfam PF08447 PAS fold 284 369 1.2E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 Pfam PF08447 PAS fold 164 247 6.3E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 Gene3D G3DSA:3.30.450.20 133 260 1.8E-21 T 14-10-2018 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 Gene3D G3DSA:3.30.450.20 261 396 1.1E-23 T 14-10-2018 AMBLS11_01555 0a76d5420fa2c1a1e551402f4bb48065 768 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 532 687 2.3E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_09475 bca3d4ade1ca7a37c3254140cc9824e1 140 PRINTS PR01438 Universal stress protein signature 4 22 9.1E-14 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_09475 bca3d4ade1ca7a37c3254140cc9824e1 140 PRINTS PR01438 Universal stress protein signature 100 112 9.1E-14 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_09475 bca3d4ade1ca7a37c3254140cc9824e1 140 PRINTS PR01438 Universal stress protein signature 117 139 9.1E-14 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_09475 bca3d4ade1ca7a37c3254140cc9824e1 140 Gene3D G3DSA:3.40.50.620 1 140 2.4E-31 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_09475 bca3d4ade1ca7a37c3254140cc9824e1 140 Pfam PF00582 Universal stress protein family 3 139 4.3E-26 T 14-10-2018 IPR006016 UspA AMBLS11_09475 bca3d4ade1ca7a37c3254140cc9824e1 140 SUPERFAMILY SSF52402 4 139 1.12E-29 T 14-10-2018 AMBLS11_09475 bca3d4ade1ca7a37c3254140cc9824e1 140 PIRSF PIRSF006276 1 140 2.1E-28 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_04015 217d2463b71538906c5ac614a46fd654 291 Gene3D G3DSA:3.30.420.40 5 114 2.3E-67 T 14-10-2018 AMBLS11_04015 217d2463b71538906c5ac614a46fd654 291 SUPERFAMILY SSF53067 114 285 1.76E-36 T 14-10-2018 AMBLS11_04015 217d2463b71538906c5ac614a46fd654 291 Gene3D G3DSA:3.30.420.40 115 263 2.3E-67 T 14-10-2018 AMBLS11_04015 217d2463b71538906c5ac614a46fd654 291 SUPERFAMILY SSF53067 3 111 2.27E-20 T 14-10-2018 AMBLS11_04015 217d2463b71538906c5ac614a46fd654 291 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 266 5.2E-20 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 135 6.1E-42 T 14-10-2018 AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 Gene3D G3DSA:3.40.50.300 191 495 3.7E-53 T 14-10-2018 AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 10 492 8.6E-173 T 14-10-2018 IPR004482 Mg chelatase-related protein AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 Gene3D G3DSA:3.30.230.10 1 164 1.8E-6 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 SUPERFAMILY SSF54211 8 169 1.02E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 289 304 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 SMART SM00382 210 388 6.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 388 1.4E-83 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 SUPERFAMILY SSF52540 190 495 8.17E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_18680 ba9a77ceeea6e1aabdc28688619256fa 504 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 492 2.1E-25 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 444 2.6E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 446 45.763 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 1.8E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.8E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 177 196 1.8E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 367 4.9E-32 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 SUPERFAMILY SSF53738 159 260 5.89E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 133 1.1E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 Gene3D G3DSA:3.40.120.10 260 341 6.4E-65 T 14-10-2018 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 7.7E-182 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 Gene3D G3DSA:3.40.120.10 2 147 2.2E-46 T 14-10-2018 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 SUPERFAMILY SSF55957 360 445 1.83E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 Gene3D G3DSA:3.40.120.10 177 364 6.4E-65 T 14-10-2018 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 SUPERFAMILY SSF53738 2 184 3.53E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 257 1.3E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 SUPERFAMILY SSF53738 261 367 5.89E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_16260 e865f95d3b3d90ff9c7b9f2ed3a8030a 446 Gene3D G3DSA:3.30.310.50 372 446 3.1E-22 T 14-10-2018 AMBLS11_05185 7eaf3168f2b191fcf0e72b4c9856e6da 79 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 1 74 1.0E-13 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AMBLS11_05185 7eaf3168f2b191fcf0e72b4c9856e6da 79 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 79 21.097 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 AMBLS11_05185 7eaf3168f2b191fcf0e72b4c9856e6da 79 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 1 77 6.3E-11 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AMBLS11_07620 888cc02c47740f740f5930a5c9d64fb5 177 Gene3D G3DSA:3.30.530.20 27 176 8.8E-17 T 14-10-2018 IPR023393 START-like domain superfamily AMBLS11_07620 888cc02c47740f740f5930a5c9d64fb5 177 SUPERFAMILY SSF55961 26 176 1.97E-20 T 14-10-2018 AMBLS11_07620 888cc02c47740f740f5930a5c9d64fb5 177 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 29 174 3.9E-15 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 Gene3D G3DSA:3.40.350.10 2 172 9.7E-50 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 SMART SM01011 2 138 1.7E-47 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 SUPERFAMILY SSF53092 1 175 5.23E-45 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 128 9.7E-34 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 SUPERFAMILY SSF55920 176 436 5.76E-85 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 Pfam PF00557 Metallopeptidase family M24 183 413 2.7E-65 T 14-10-2018 IPR000994 Peptidase M24 AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 PRINTS PR00599 Methionine aminopeptidase-1 signature 372 384 1.5E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 PRINTS PR00599 Methionine aminopeptidase-1 signature 254 270 1.5E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMBLS11_13840 c011b2ca98d026637ef1a15d64108083 439 Gene3D G3DSA:3.90.230.10 174 439 1.7E-99 T 14-10-2018 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 SUPERFAMILY SSF48452 117 250 4.64E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 TIGRFAM TIGR01068 thioredoxin: thioredoxin 17 115 2.2E-31 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 PRINTS PR00421 Thioredoxin family signature 81 92 1.9E-5 T 14-10-2018 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 PRINTS PR00421 Thioredoxin family signature 41 50 1.9E-5 T 14-10-2018 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 PRINTS PR00421 Thioredoxin family signature 33 41 1.9E-5 T 14-10-2018 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 ProSitePatterns PS00194 Thioredoxin family active site. 34 52 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 Pfam PF00085 Thioredoxin 13 115 1.8E-27 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 Pfam PF14561 Tetratricopeptide repeat 202 289 4.4E-24 T 14-10-2018 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 SUPERFAMILY SSF52833 10 119 5.36E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 Pfam PF14559 Tetratricopeptide repeat 131 196 1.3E-17 T 14-10-2018 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 Gene3D G3DSA:1.25.40.10 204 289 2.3E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 Gene3D G3DSA:3.40.30.10 5 118 1.4E-33 T 14-10-2018 AMBLS11_02380 dd898e3c34f47422eaa6a2e124420db2 289 Gene3D G3DSA:1.25.40.10 119 203 5.5E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02830 e88f59f96c8e0a73b0c3480417c7b755 208 Gene3D G3DSA:3.90.79.10 2 206 1.3E-58 T 14-10-2018 AMBLS11_02830 e88f59f96c8e0a73b0c3480417c7b755 208 Pfam PF00293 NUDIX domain 54 173 2.0E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMBLS11_02830 e88f59f96c8e0a73b0c3480417c7b755 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 194 8.0E-59 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AMBLS11_02830 e88f59f96c8e0a73b0c3480417c7b755 208 ProSitePatterns PS00893 Nudix box signature. 94 115 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMBLS11_02830 e88f59f96c8e0a73b0c3480417c7b755 208 SUPERFAMILY SSF55811 9 203 9.34E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 Gene3D G3DSA:1.20.1440.210 47 174 3.1E-23 T 14-10-2018 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 Gene3D G3DSA:1.10.287.130 218 320 5.0E-14 T 14-10-2018 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 319 3.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 SUPERFAMILY SSF55874 312 486 3.67E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 486 3.0E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 Pfam PF05227 CHASE3 domain 47 171 8.8E-22 T 14-10-2018 IPR007891 CHASE3 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 SMART SM00388 254 322 2.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 Gene3D G3DSA:3.30.565.10 325 489 3.0E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 443 1.1E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 SUPERFAMILY SSF47384 240 320 8.63E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_10890 59c231ea1b2c79eadcf34bc5d042931c 504 SMART SM00387 363 488 1.3E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01260 5bb9692f6219e1dd34c6e600e8c46845 160 Pfam PF13474 SnoaL-like domain 74 150 5.3E-10 T 14-10-2018 IPR037401 SnoaL-like domain AMBLS11_01260 5bb9692f6219e1dd34c6e600e8c46845 160 SUPERFAMILY SSF54427 27 150 1.69E-21 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_01260 5bb9692f6219e1dd34c6e600e8c46845 160 Gene3D G3DSA:3.10.450.50 21 159 1.4E-25 T 14-10-2018 AMBLS11_01640 129ac7a342c32fc4c41c8f99a9067522 312 Pfam PF01261 Xylose isomerase-like TIM barrel 85 266 1.3E-17 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMBLS11_01640 129ac7a342c32fc4c41c8f99a9067522 312 Gene3D G3DSA:3.20.20.150 49 308 2.3E-71 T 14-10-2018 AMBLS11_01640 129ac7a342c32fc4c41c8f99a9067522 312 SUPERFAMILY SSF51658 66 282 2.49E-41 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMBLS11_02195 ed497e594b121d27aa05ff22d40891db 230 Gene3D G3DSA:3.20.20.190 1 230 1.4E-58 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMBLS11_02195 ed497e594b121d27aa05ff22d40891db 230 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 222 4.1E-31 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMBLS11_02195 ed497e594b121d27aa05ff22d40891db 230 SUPERFAMILY SSF51695 2 229 2.07E-56 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMBLS11_18970 73d4baca070b92ddcb90d4b3eb37e563 292 Gene3D G3DSA:3.90.1530.30 53 116 1.5E-27 T 14-10-2018 AMBLS11_18970 73d4baca070b92ddcb90d4b3eb37e563 292 SMART SM00470 40 130 1.9E-37 T 14-10-2018 IPR003115 ParB/Sulfiredoxin AMBLS11_18970 73d4baca070b92ddcb90d4b3eb37e563 292 SUPERFAMILY SSF110849 39 175 7.85E-36 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AMBLS11_18970 73d4baca070b92ddcb90d4b3eb37e563 292 Pfam PF02195 ParB-like nuclease domain 42 130 7.7E-30 T 14-10-2018 IPR003115 ParB/Sulfiredoxin AMBLS11_18970 73d4baca070b92ddcb90d4b3eb37e563 292 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 211 6.2E-60 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AMBLS11_18970 73d4baca070b92ddcb90d4b3eb37e563 292 Gene3D G3DSA:1.10.10.2830 117 230 2.4E-35 T 14-10-2018 AMBLS11_16205 908687b0fe6b97d53dc31daf6ed47e9c 350 Pfam PF13437 HlyD family secretion protein 187 253 8.7E-6 T 14-10-2018 AMBLS11_16205 908687b0fe6b97d53dc31daf6ed47e9c 350 Gene3D G3DSA:2.40.50.100 65 222 5.9E-28 T 14-10-2018 AMBLS11_16205 908687b0fe6b97d53dc31daf6ed47e9c 350 Pfam PF13533 Biotin-lipoyl like 66 106 8.3E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMBLS11_16205 908687b0fe6b97d53dc31daf6ed47e9c 350 SUPERFAMILY SSF111369 68 172 3.79E-9 T 14-10-2018 AMBLS11_16205 908687b0fe6b97d53dc31daf6ed47e9c 350 Gene3D G3DSA:2.40.30.170 223 287 5.9E-28 T 14-10-2018 AMBLS11_16205 908687b0fe6b97d53dc31daf6ed47e9c 350 Gene3D G3DSA:1.10.287.470 99 185 5.9E-28 T 14-10-2018 AMBLS11_04370 41c967e88504ad911ad2ca1e51cbf5ae 233 Gene3D G3DSA:3.40.30.10 24 195 3.8E-34 T 14-10-2018 AMBLS11_04370 41c967e88504ad911ad2ca1e51cbf5ae 233 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMBLS11_04370 41c967e88504ad911ad2ca1e51cbf5ae 233 SUPERFAMILY SSF52833 42 188 1.18E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_04370 41c967e88504ad911ad2ca1e51cbf5ae 233 Pfam PF08534 Redoxin 39 173 8.1E-16 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 PIRSF PIRSF037307 2 838 6.0E-184 T 14-10-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 Gene3D G3DSA:3.40.50.300 264 404 1.2E-25 T 14-10-2018 AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 SMART SM00490 293 378 3.2E-16 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 SMART SM00487 15 252 1.3E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 Gene3D G3DSA:3.40.50.300 1 239 2.5E-38 T 14-10-2018 AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 8 828 0.0 T 14-10-2018 IPR026362 DEXH box helicase, DNA ligase-associated AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 Pfam PF08494 DEAD/H associated 620 803 7.8E-39 T 14-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 Pfam PF00271 Helicase conserved C-terminal domain 270 373 1.6E-17 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 SUPERFAMILY SSF52540 31 384 9.83E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17165 f877f2443887d81504a42c82e26e6960 850 Pfam PF00270 DEAD/DEAH box helicase 32 220 4.7E-20 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SUPERFAMILY SSF55874 627 795 2.1E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SUPERFAMILY SSF47384 560 639 2.75E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Gene3D G3DSA:3.30.450.20 17 120 3.7E-8 T 14-10-2018 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Pfam PF08448 PAS fold 320 429 2.8E-15 T 14-10-2018 IPR013656 PAS fold-4 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SUPERFAMILY SSF55785 302 422 5.23E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Gene3D G3DSA:3.30.450.20 301 439 1.2E-27 T 14-10-2018 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Pfam PF13185 GAF domain 145 287 2.9E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Pfam PF00512 His Kinase A (phospho-acceptor) domain 573 637 1.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Gene3D G3DSA:3.30.565.10 639 798 8.2E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Pfam PF08447 PAS fold 465 552 1.4E-18 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Gene3D G3DSA:3.30.450.20 440 555 2.7E-24 T 14-10-2018 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Gene3D G3DSA:1.10.287.130 560 638 2.5E-20 T 14-10-2018 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Gene3D G3DSA:3.30.450.40 122 291 1.2E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 312 434 4.9E-17 T 14-10-2018 IPR000014 PAS domain AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 439 566 9.7E-7 T 14-10-2018 IPR000014 PAS domain AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 95 1.5E-5 T 14-10-2018 IPR000014 PAS domain AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SMART SM00086 387 428 310.0 T 14-10-2018 IPR001610 PAC motif AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SMART SM00086 517 559 2.2E-6 T 14-10-2018 IPR001610 PAC motif AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SMART SM00387 684 797 2.0E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SUPERFAMILY SSF55785 425 557 1.38E-19 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SMART SM00448 820 933 9.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SUPERFAMILY SSF52172 818 939 3.98E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SUPERFAMILY SSF55785 18 107 1.15E-7 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 PRINTS PR00344 Bacterial sensor protein C-terminal signature 781 794 1.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 PRINTS PR00344 Bacterial sensor protein C-terminal signature 756 774 1.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 735 1.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 PRINTS PR00344 Bacterial sensor protein C-terminal signature 739 749 1.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 684 794 2.6E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Gene3D G3DSA:3.40.50.2300 804 945 4.7E-30 T 14-10-2018 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SMART SM00091 440 511 0.15 T 14-10-2018 IPR000014 PAS domain AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SMART SM00091 16 82 0.0056 T 14-10-2018 IPR000014 PAS domain AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SMART SM00091 314 381 6.4E-11 T 14-10-2018 IPR000014 PAS domain AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SUPERFAMILY SSF55781 145 291 6.13E-12 T 14-10-2018 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 SMART SM00388 572 638 5.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Pfam PF00072 Response regulator receiver domain 822 930 4.7E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15065 ae796ad1072dd1f5e31d550f58faace1 945 Pfam PF00989 PAS fold 18 84 2.3E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMBLS11_11500 424f4d9940a230f8dff92fbdbfc024ad 400 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 291 1.1E-15 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMBLS11_11500 424f4d9940a230f8dff92fbdbfc024ad 400 Gene3D G3DSA:3.30.1370.170 310 398 2.3E-10 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 AMBLS11_11500 424f4d9940a230f8dff92fbdbfc024ad 400 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 379 37.735 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 AMBLS11_11500 424f4d9940a230f8dff92fbdbfc024ad 400 Pfam PF11890 Domain of unknown function (DUF3410) 319 394 1.1E-9 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 AMBLS11_11500 424f4d9940a230f8dff92fbdbfc024ad 400 SUPERFAMILY SSF51735 92 265 9.29E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11500 424f4d9940a230f8dff92fbdbfc024ad 400 Gene3D G3DSA:3.40.50.720 93 265 1.3E-94 T 14-10-2018 AMBLS11_11500 424f4d9940a230f8dff92fbdbfc024ad 400 SUPERFAMILY SSF52283 4 103 8.5E-18 T 14-10-2018 AMBLS11_11500 424f4d9940a230f8dff92fbdbfc024ad 400 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 264 1.2E-28 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMBLS11_11500 424f4d9940a230f8dff92fbdbfc024ad 400 Gene3D G3DSA:3.40.50.720 1 285 1.3E-94 T 14-10-2018 AMBLS11_17125 d0c96c5423542ad3a3935161223a3252 405 Gene3D G3DSA:1.20.1250.20 1 181 2.7E-31 T 14-10-2018 AMBLS11_17125 d0c96c5423542ad3a3935161223a3252 405 Gene3D G3DSA:1.20.1250.20 187 388 6.3E-29 T 14-10-2018 AMBLS11_17125 d0c96c5423542ad3a3935161223a3252 405 Pfam PF07690 Major Facilitator Superfamily 6 350 3.4E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_17125 d0c96c5423542ad3a3935161223a3252 405 ProSitePatterns PS00216 Sugar transport proteins signature 1. 48 64 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMBLS11_17125 d0c96c5423542ad3a3935161223a3252 405 SUPERFAMILY SSF103473 2 393 6.93E-52 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_11715 b2fcbdb7d4c68bf2728887eee8f04530 98 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.198 T 14-10-2018 IPR027354 YcgL domain AMBLS11_11715 b2fcbdb7d4c68bf2728887eee8f04530 98 Gene3D G3DSA:3.10.510.20 1 74 5.5E-29 T 14-10-2018 IPR038068 YcgL-like superfamily AMBLS11_11715 b2fcbdb7d4c68bf2728887eee8f04530 98 SUPERFAMILY SSF160191 1 92 1.22E-36 T 14-10-2018 IPR038068 YcgL-like superfamily AMBLS11_11715 b2fcbdb7d4c68bf2728887eee8f04530 98 Pfam PF05166 YcgL domain 3 75 1.3E-30 T 14-10-2018 IPR027354 YcgL domain AMBLS11_11715 b2fcbdb7d4c68bf2728887eee8f04530 98 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 2.0E-19 T 14-10-2018 IPR027354 YcgL domain AMBLS11_10370 1cc69c33c759b7c9373042e11357ae2f 211 SUPERFAMILY SSF69593 29 170 5.89E-22 T 14-10-2018 AMBLS11_10370 1cc69c33c759b7c9373042e11357ae2f 211 SMART SM00563 57 169 1.5E-18 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_10370 1cc69c33c759b7c9373042e11357ae2f 211 Pfam PF01553 Acyltransferase 45 164 2.4E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.7E-87 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 SMART SM00363 96 160 2.1E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.97 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 Pfam PF01479 S4 domain 96 143 2.3E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 Gene3D G3DSA:3.10.290.10 95 191 1.8E-81 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 Gene3D G3DSA:1.10.1050.10 6 206 1.8E-81 T 14-10-2018 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 SUPERFAMILY SSF55174 3 206 1.7E-74 T 14-10-2018 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.4E-33 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMBLS11_16345 b02054c0e861081b087366f16f80f1ea 206 SMART SM01390 3 95 4.5E-52 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMBLS11_00145 3761ff45a3276abf331515a5adf682ca 224 Pfam PF03922 OmpW family 24 224 4.1E-59 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AMBLS11_00145 3761ff45a3276abf331515a5adf682ca 224 Gene3D G3DSA:2.40.160.20 23 224 1.8E-72 T 14-10-2018 AMBLS11_00145 3761ff45a3276abf331515a5adf682ca 224 SUPERFAMILY SSF56925 24 224 7.85E-30 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMBLS11_09690 c89b266aa089b9b03648a1c2a94ecf62 288 PIRSF PIRSF015558 1 284 7.5E-88 T 14-10-2018 IPR016634 WYL domain protein, s026 type AMBLS11_09690 c89b266aa089b9b03648a1c2a94ecf62 288 Pfam PF13280 WYL domain 119 230 7.4E-12 T 14-10-2018 IPR026881 WYL domain AMBLS11_02965 4673bc53eab34727452adb405256463d 123 Pfam PF13806 Rieske-like [2Fe-2S] domain 16 121 1.1E-33 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AMBLS11_02965 4673bc53eab34727452adb405256463d 123 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 16 121 2.6E-30 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AMBLS11_02965 4673bc53eab34727452adb405256463d 123 Gene3D G3DSA:2.102.10.10 11 123 7.5E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMBLS11_02965 4673bc53eab34727452adb405256463d 123 SUPERFAMILY SSF50022 16 123 6.28E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMBLS11_09045 69d9df8829acfef923a8dd7089bb70a2 346 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 134 321 5.9E-55 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMBLS11_09045 69d9df8829acfef923a8dd7089bb70a2 346 Gene3D G3DSA:3.40.50.720 20 339 4.9E-129 T 14-10-2018 AMBLS11_09045 69d9df8829acfef923a8dd7089bb70a2 346 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 36 341 4.8E-25 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMBLS11_09045 69d9df8829acfef923a8dd7089bb70a2 346 SUPERFAMILY SSF51735 126 322 6.4E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_09045 69d9df8829acfef923a8dd7089bb70a2 346 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 247 263 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMBLS11_09045 69d9df8829acfef923a8dd7089bb70a2 346 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 171 198 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMBLS11_09045 69d9df8829acfef923a8dd7089bb70a2 346 SUPERFAMILY SSF52283 19 158 9.45E-35 T 14-10-2018 AMBLS11_09045 69d9df8829acfef923a8dd7089bb70a2 346 Gene3D G3DSA:3.40.50.720 126 321 4.9E-129 T 14-10-2018 AMBLS11_17635 6661779b30deb54f95bb94e7cbadc075 370 Pfam PF07690 Major Facilitator Superfamily 2 273 2.6E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_17635 6661779b30deb54f95bb94e7cbadc075 370 SUPERFAMILY SSF103473 4 366 1.7E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_17635 6661779b30deb54f95bb94e7cbadc075 370 Gene3D G3DSA:1.20.1250.20 1 368 3.0E-39 T 14-10-2018 AMBLS11_13540 72dd178074a50f8efab82267237e74a4 617 Pfam PF07695 7TM diverse intracellular signalling 182 362 9.9E-11 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AMBLS11_13540 72dd178074a50f8efab82267237e74a4 617 Pfam PF06580 Histidine kinase 384 460 1.9E-15 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMBLS11_16110 f8e5e0c97ba82432c08493198d86e91f 825 Gene3D G3DSA:3.40.50.200 124 459 7.5E-67 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_16110 f8e5e0c97ba82432c08493198d86e91f 825 PRINTS PR00723 Subtilisin serine protease family (S8) signature 139 158 3.8E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_16110 f8e5e0c97ba82432c08493198d86e91f 825 PRINTS PR00723 Subtilisin serine protease family (S8) signature 398 414 3.8E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_16110 f8e5e0c97ba82432c08493198d86e91f 825 PRINTS PR00723 Subtilisin serine protease family (S8) signature 195 208 3.8E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_16110 f8e5e0c97ba82432c08493198d86e91f 825 Pfam PF00082 Subtilase family 139 448 5.9E-36 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMBLS11_16110 f8e5e0c97ba82432c08493198d86e91f 825 SUPERFAMILY SSF52743 134 458 8.77E-58 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_16110 f8e5e0c97ba82432c08493198d86e91f 825 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 199 209 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMBLS11_16110 f8e5e0c97ba82432c08493198d86e91f 825 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 399 409 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMBLS11_07550 14fd1caa6c4807cd7938bdefd10cd3fa 187 SUPERFAMILY SSF53271 3 162 1.04E-27 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMBLS11_07550 14fd1caa6c4807cd7938bdefd10cd3fa 187 Gene3D G3DSA:3.40.50.2020 1 185 2.7E-35 T 14-10-2018 AMBLS11_07550 14fd1caa6c4807cd7938bdefd10cd3fa 187 Pfam PF00156 Phosphoribosyl transferase domain 9 161 4.0E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMBLS11_14115 a2923b2c04f93b083e04d3275fa3d768 466 Gene3D G3DSA:1.20.1600.10 40 455 1.2E-42 T 14-10-2018 AMBLS11_14115 a2923b2c04f93b083e04d3275fa3d768 466 Pfam PF02321 Outer membrane efflux protein 278 454 2.0E-9 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_14115 a2923b2c04f93b083e04d3275fa3d768 466 Pfam PF02321 Outer membrane efflux protein 47 231 8.1E-15 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_14115 a2923b2c04f93b083e04d3275fa3d768 466 SUPERFAMILY SSF56954 23 454 6.41E-46 T 14-10-2018 AMBLS11_08680 aaccdeed5303d67e922af0af5aaefda5 164 SUPERFAMILY SSF52540 4 132 7.1E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08680 aaccdeed5303d67e922af0af5aaefda5 164 Gene3D G3DSA:3.40.50.300 2 154 6.2E-14 T 14-10-2018 AMBLS11_10710 86a9e754d1b7ef3981a8bdd5b898491f 498 ProSitePatterns PS01276 Peptidase family U32 signature. 188 206 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AMBLS11_10710 86a9e754d1b7ef3981a8bdd5b898491f 498 Pfam PF01136 Peptidase family U32 104 373 1.9E-96 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AMBLS11_10710 86a9e754d1b7ef3981a8bdd5b898491f 498 Gene3D G3DSA:2.40.30.10 385 472 3.8E-12 T 14-10-2018 AMBLS11_10710 86a9e754d1b7ef3981a8bdd5b898491f 498 Pfam PF16325 Peptidase family U32 C-terminal domain 389 471 1.4E-20 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal AMBLS11_04605 babf545a7e7c7daa22ebb1a62711c56a 149 SUPERFAMILY SSF54637 8 146 7.65E-48 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_04605 babf545a7e7c7daa22ebb1a62711c56a 149 Pfam PF07977 FabA-like domain 17 139 9.3E-35 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_04605 babf545a7e7c7daa22ebb1a62711c56a 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 147 35.609 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_04605 babf545a7e7c7daa22ebb1a62711c56a 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 145 2.1E-59 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_04605 babf545a7e7c7daa22ebb1a62711c56a 149 Gene3D G3DSA:3.10.129.10 3 148 3.2E-59 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 Gene3D G3DSA:1.10.246.130 270 384 1.4E-31 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 Pfam PF01019 Gamma-glutamyltranspeptidase 60 562 3.5E-165 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 67 92 1.9E-71 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 157 176 1.9E-71 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 448 463 1.9E-71 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 284 303 1.9E-71 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 139 157 1.9E-71 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 383 401 1.9E-71 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 254 270 1.9E-71 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 1.9E-71 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 472 489 1.9E-71 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 SUPERFAMILY SSF56235 40 559 4.5E-168 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 47 559 3.7E-158 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 Gene3D G3DSA:3.60.20.40 385 567 9.9E-65 T 14-10-2018 AMBLS11_02425 28c265b35927b9f86041c649750bd627 572 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 383 407 - T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AMBLS11_10500 a86921455743471c3514cb2f16a17a44 315 Gene3D G3DSA:2.40.100.10 179 312 8.7E-39 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_10500 a86921455743471c3514cb2f16a17a44 315 SMART SM00797 24 306 5.8E-90 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AMBLS11_10500 a86921455743471c3514cb2f16a17a44 315 SUPERFAMILY SSF50891 183 296 3.15E-5 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_10500 a86921455743471c3514cb2f16a17a44 315 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 289 8.5E-71 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AMBLS11_01535 fc567f42eb63c65cc97d1b35a5c3c6ce 403 Gene3D G3DSA:1.10.287.950 74 385 2.7E-38 T 14-10-2018 AMBLS11_01535 fc567f42eb63c65cc97d1b35a5c3c6ce 403 SMART SM00283 116 369 2.7E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_01535 fc567f42eb63c65cc97d1b35a5c3c6ce 403 SUPERFAMILY SSF58104 115 334 2.22E-35 T 14-10-2018 AMBLS11_01535 fc567f42eb63c65cc97d1b35a5c3c6ce 403 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 189 325 1.4E-26 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_03430 e7f26ac5792e17e682cb80fa4ce24d42 122 PIRSF PIRSF016789 2 122 9.2E-32 T 14-10-2018 IPR007401 Protein of unknown function DUF454 AMBLS11_03430 e7f26ac5792e17e682cb80fa4ce24d42 122 Pfam PF04304 Protein of unknown function (DUF454) 3 117 1.9E-33 T 14-10-2018 IPR007401 Protein of unknown function DUF454 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 Gene3D G3DSA:1.25.40.10 788 912 1.5E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 Pfam PF14559 Tetratricopeptide repeat 319 374 9.9E-6 T 14-10-2018 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 Gene3D G3DSA:1.25.40.10 35 116 1.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 Pfam PF13432 Tetratricopeptide repeat 791 837 0.0041 T 14-10-2018 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 Pfam PF13432 Tetratricopeptide repeat 209 266 0.0014 T 14-10-2018 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 66 99 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 473 506 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 844 877 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 609 642 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 710 743 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 406 438 290.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 507 540 98.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 32 65 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 810 843 7.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SMART SM00028 271 304 77.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SUPERFAMILY SSF48452 423 675 4.49E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 Gene3D G3DSA:1.25.40.10 117 365 1.1E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 15 902 3.2E-153 T 14-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 Gene3D G3DSA:1.25.40.10 366 601 1.1E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SUPERFAMILY SSF48452 790 895 5.06E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 SUPERFAMILY SSF48452 45 365 3.58E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02810 e03d0b00a5d71a87a1cd6ef1960862b3 924 Pfam PF13414 TPR repeat 42 79 2.8E-7 T 14-10-2018 AMBLS11_16455 57e67e1f8ecc7b0311ef67b3dc548979 572 Gene3D G3DSA:2.60.40.380 35 145 7.9E-35 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AMBLS11_16455 57e67e1f8ecc7b0311ef67b3dc548979 572 SUPERFAMILY SSF56300 151 552 7.3E-31 T 14-10-2018 AMBLS11_16455 57e67e1f8ecc7b0311ef67b3dc548979 572 Pfam PF09423 PhoD-like phosphatase 154 549 2.7E-117 T 14-10-2018 IPR018946 Alkaline phosphatase D-related AMBLS11_16455 57e67e1f8ecc7b0311ef67b3dc548979 572 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 26 0.0014 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMBLS11_16455 57e67e1f8ecc7b0311ef67b3dc548979 572 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 44 143 1.4E-31 T 14-10-2018 IPR032093 Phospholipase D, N-terminal AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 315 3.6E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 SMART SM00304 195 248 0.0096 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 SMART SM00387 359 468 2.0E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 Gene3D G3DSA:1.10.287.130 199 315 7.8E-23 T 14-10-2018 AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 Gene3D G3DSA:3.30.565.10 321 468 3.6E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 SUPERFAMILY SSF55874 304 465 1.83E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 SMART SM00388 249 315 1.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 SUPERFAMILY SSF47384 233 315 3.92E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 3.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 3.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 11 466 1.1E-136 T 14-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AMBLS11_01200 4212e3834b62a438207cd2eedf5797ba 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 461 1.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 Gene3D G3DSA:3.30.1370.120 262 351 5.4E-17 T 14-10-2018 IPR038591 NolW-like superfamily AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 623 2.2E-160 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 559 592 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 Pfam PF00263 Bacterial type II and III secretion system protein 453 614 8.5E-53 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 Pfam PF03958 Bacterial type II/III secretion system short domain 269 349 9.9E-17 T 14-10-2018 IPR005644 NolW-like AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 Pfam PF03958 Bacterial type II/III secretion system short domain 129 190 1.7E-8 T 14-10-2018 IPR005644 NolW-like AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 Pfam PF03958 Bacterial type II/III secretion system short domain 194 262 3.6E-14 T 14-10-2018 IPR005644 NolW-like AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 PRINTS PR01032 Gene IV protein signature 474 497 1.9E-16 T 14-10-2018 AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 PRINTS PR01032 Gene IV protein signature 594 616 1.9E-16 T 14-10-2018 AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 PRINTS PR01032 Gene IV protein signature 541 569 1.9E-16 T 14-10-2018 AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 473 1.3E-36 T 14-10-2018 IPR001775 GspD/PilQ family AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 PRINTS PR00811 Bacterial general secretion pathway protein D signature 484 494 1.3E-36 T 14-10-2018 IPR001775 GspD/PilQ family AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 PRINTS PR00811 Bacterial general secretion pathway protein D signature 349 359 1.3E-36 T 14-10-2018 IPR001775 GspD/PilQ family AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 PRINTS PR00811 Bacterial general secretion pathway protein D signature 578 596 1.3E-36 T 14-10-2018 IPR001775 GspD/PilQ family AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 PRINTS PR00811 Bacterial general secretion pathway protein D signature 601 615 1.3E-36 T 14-10-2018 IPR001775 GspD/PilQ family AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 Gene3D G3DSA:3.30.1370.120 192 261 7.3E-20 T 14-10-2018 IPR038591 NolW-like superfamily AMBLS11_18230 f936d5244e0b4f50a786b88ab7240cf0 683 Gene3D G3DSA:3.30.1370.120 25 189 2.9E-51 T 14-10-2018 IPR038591 NolW-like superfamily AMBLS11_06905 a310e19dd73ae1fe4cd085df8250dcff 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMBLS11_06905 a310e19dd73ae1fe4cd085df8250dcff 279 Gene3D G3DSA:1.10.8.10 1 83 2.6E-22 T 14-10-2018 AMBLS11_06905 a310e19dd73ae1fe4cd085df8250dcff 279 Pfam PF13847 Methyltransferase domain 112 241 6.8E-22 T 14-10-2018 IPR025714 Methyltransferase domain AMBLS11_06905 a310e19dd73ae1fe4cd085df8250dcff 279 Gene3D G3DSA:3.40.50.150 85 279 9.2E-64 T 14-10-2018 AMBLS11_06905 a310e19dd73ae1fe4cd085df8250dcff 279 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 278 8.5E-83 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMBLS11_06905 a310e19dd73ae1fe4cd085df8250dcff 279 SUPERFAMILY SSF53335 3 276 4.93E-61 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_06905 a310e19dd73ae1fe4cd085df8250dcff 279 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 274 2.0E-93 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMBLS11_06905 a310e19dd73ae1fe4cd085df8250dcff 279 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 278 43.953 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMBLS11_01700 d5e4bdd6567e02ac4c59c7ffc199dcf4 153 Gene3D G3DSA:2.60.120.10 1 147 2.9E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_01700 d5e4bdd6567e02ac4c59c7ffc199dcf4 153 SUPERFAMILY SSF51182 3 142 9.49E-44 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_01700 d5e4bdd6567e02ac4c59c7ffc199dcf4 153 Pfam PF06172 Cupin superfamily (DUF985) 5 132 5.5E-40 T 14-10-2018 IPR009327 Cupin domain of unknown function DUF985 AMBLS11_05965 d238a844d29e0ad45da61266e90218fe 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 173 23.057 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMBLS11_05965 d238a844d29e0ad45da61266e90218fe 173 Gene3D G3DSA:2.40.30.60 1 91 3.4E-30 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AMBLS11_05965 d238a844d29e0ad45da61266e90218fe 173 SUPERFAMILY SSF50447 6 91 7.95E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_05965 d238a844d29e0ad45da61266e90218fe 173 Pfam PF05239 PRC-barrel domain 95 168 8.5E-12 T 14-10-2018 IPR027275 PRC-barrel domain AMBLS11_05965 d238a844d29e0ad45da61266e90218fe 173 Pfam PF01782 RimM N-terminal domain 10 87 9.7E-25 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 AMBLS11_05965 d238a844d29e0ad45da61266e90218fe 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 173 9.9E-49 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMBLS11_05965 d238a844d29e0ad45da61266e90218fe 173 SUPERFAMILY SSF50346 98 173 2.94E-19 T 14-10-2018 IPR011033 PRC-barrel-like superfamily AMBLS11_05965 d238a844d29e0ad45da61266e90218fe 173 Gene3D G3DSA:2.30.30.240 92 173 1.5E-26 T 14-10-2018 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 9 466 2.6E-109 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 87 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 SUPERFAMILY SSF103473 11 466 1.57E-66 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 PRINTS PR00171 Sugar transporter signature 24 34 5.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 PRINTS PR00171 Sugar transporter signature 107 126 5.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 PRINTS PR00171 Sugar transporter signature 275 285 5.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 PRINTS PR00171 Sugar transporter signature 394 406 5.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 PRINTS PR00171 Sugar transporter signature 371 392 5.2E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 Pfam PF00083 Sugar (and other) transporter 17 467 4.3E-108 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 ProSitePatterns PS00216 Sugar transport proteins signature 1. 319 336 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMBLS11_18500 01007f2d4df67c546b7a1bd7fb280541 468 Gene3D G3DSA:1.20.1250.20 7 468 2.5E-118 T 14-10-2018 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Pfam PF02355 Protein export membrane protein 341 507 6.7E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Pfam PF02355 Protein export membrane protein 646 829 4.8E-54 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Pfam PF07549 SecD/SecF GG Motif 567 588 1.7E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Pfam PF07549 SecD/SecF GG Motif 40 64 9.9E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 544 832 25.114 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 572 820 3.8E-65 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Gene3D G3DSA:3.30.1360.200 212 338 3.9E-56 T 14-10-2018 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 SUPERFAMILY SSF82866 252 514 9.16E-40 T 14-10-2018 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Gene3D G3DSA:3.30.70.3400 155 340 3.9E-56 T 14-10-2018 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Gene3D G3DSA:1.20.1640.10 666 852 3.2E-19 T 14-10-2018 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 SUPERFAMILY SSF82866 646 834 3.14E-40 T 14-10-2018 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 PRINTS PR01755 Bacterial translocase SecF protein signature 769 784 2.9E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 PRINTS PR01755 Bacterial translocase SecF protein signature 571 586 2.9E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 PRINTS PR01755 Bacterial translocase SecF protein signature 689 703 2.9E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 PRINTS PR01755 Bacterial translocase SecF protein signature 737 755 2.9E-25 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Gene3D G3DSA:1.20.1640.10 341 526 6.1E-20 T 14-10-2018 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 270 500 4.5E-75 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 507 2.9E-131 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMBLS11_03720 ac42d348284baf461782aaf6826cfb71 855 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 519 39.665 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMBLS11_09885 4703a46264c7e2a4810eef01dcf1b71d 428 PIRSF PIRSF000505 2 428 4.7E-157 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMBLS11_09885 4703a46264c7e2a4810eef01dcf1b71d 428 Gene3D G3DSA:3.65.10.10 242 418 1.4E-155 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMBLS11_09885 4703a46264c7e2a4810eef01dcf1b71d 428 SUPERFAMILY SSF55205 1 424 2.75E-141 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMBLS11_09885 4703a46264c7e2a4810eef01dcf1b71d 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 427 35.672 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMBLS11_09885 4703a46264c7e2a4810eef01dcf1b71d 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 419 1.2E-154 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AMBLS11_09885 4703a46264c7e2a4810eef01dcf1b71d 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 3.0E-147 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMBLS11_09885 4703a46264c7e2a4810eef01dcf1b71d 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMBLS11_09885 4703a46264c7e2a4810eef01dcf1b71d 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMBLS11_09885 4703a46264c7e2a4810eef01dcf1b71d 428 Gene3D G3DSA:3.65.10.10 20 224 1.4E-155 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMBLS11_07560 37a56aa5dda2daab8b3e06047571d09d 397 Pfam PF08495 FIST N domain 96 228 1.2E-15 T 14-10-2018 IPR013702 FIST domain, N-terminal AMBLS11_07560 37a56aa5dda2daab8b3e06047571d09d 397 SMART SM01204 231 378 2.5E-29 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMBLS11_07560 37a56aa5dda2daab8b3e06047571d09d 397 Pfam PF10442 FIST C domain 260 377 5.3E-18 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMBLS11_07560 37a56aa5dda2daab8b3e06047571d09d 397 SMART SM00897 34 230 3.7E-11 T 14-10-2018 IPR013702 FIST domain, N-terminal AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 PIRSF PIRSF000398 3 277 2.3E-66 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 Gene3D G3DSA:3.40.50.150 9 241 1.2E-85 T 14-10-2018 AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 SUPERFAMILY SSF53335 7 270 1.35E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 TIGRFAM TIGR00571 dam: DNA adenine methylase 7 269 3.6E-91 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 Gene3D G3DSA:1.10.1020.10 59 158 1.2E-85 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 12 252 2.0E-67 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 33 47 4.9E-19 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 52 65 4.9E-19 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 12 28 4.9E-19 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMBLS11_01995 3278d1d394760afd3ea59acb4642b41c 293 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 177 189 4.9E-19 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 Gene3D G3DSA:3.30.420.40 129 297 2.2E-132 T 14-10-2018 AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 SUPERFAMILY SSF53067 101 313 4.59E-43 T 14-10-2018 AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.1E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.1E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.1E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.1E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.1E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.1E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 Gene3D G3DSA:3.30.420.40 3 319 2.2E-132 T 14-10-2018 AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 Pfam PF00814 Glycoprotease family 24 311 8.1E-105 T 14-10-2018 IPR000905 Gcp-like domain AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 4.1E-137 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 65.118 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 8.0E-127 T 14-10-2018 IPR017861 Kae1/TsaD family AMBLS11_03140 9800b248adab52ba5981000b5fed8775 341 SUPERFAMILY SSF53067 3 123 5.57E-32 T 14-10-2018 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 SUPERFAMILY SSF55874 244 417 5.24E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 SUPERFAMILY SSF52172 435 557 4.41E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 SUPERFAMILY SSF47384 175 256 6.08E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 Pfam PF00072 Response regulator receiver domain 439 548 4.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 Gene3D G3DSA:1.10.287.130 157 253 3.9E-25 T 14-10-2018 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 Gene3D G3DSA:3.40.50.2300 434 566 2.5E-36 T 14-10-2018 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 Gene3D G3DSA:3.30.565.10 254 424 1.4E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 2.0E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 2.0E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 2.0E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 2.0E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 SMART SM00388 190 255 1.0E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 SMART SM00448 437 548 7.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 Pfam PF00512 His Kinase A (phospho-acceptor) domain 191 255 1.5E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 SMART SM00387 302 418 5.6E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03305 f66a232a9eab6c83ad2b0d567b90b648 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 417 1.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 869 890 8.9E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 612 628 8.9E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 640 656 8.9E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 672 697 8.9E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 491 509 8.9E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 Pfam PF00690 Cation transporter/ATPase, N-terminus 9 75 6.2E-16 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 Gene3D G3DSA:1.20.1110.10 59 895 5.2E-269 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 331 337 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 SUPERFAMILY SSF56784 327 743 1.04E-53 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 Gene3D G3DSA:2.70.150.10 23 231 5.2E-269 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 Pfam PF00689 Cation transporting ATPase, C-terminus 724 897 2.5E-39 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 Gene3D G3DSA:3.40.1110.10 339 546 5.2E-269 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 SUPERFAMILY SSF81660 336 543 1.09E-45 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 Pfam PF00122 E1-E2 ATPase 116 309 5.6E-47 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 329 343 1.4E-34 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 676 1.4E-34 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 550 1.4E-34 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 571 1.4E-34 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 166 180 1.4E-34 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 640 659 1.4E-34 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 87 349 8.7E-38 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 611 731 2.9E-30 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 SMART SM00831 8 81 2.5E-21 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 Gene3D G3DSA:3.40.50.1000 326 685 5.2E-269 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 654 5.4E-16 T 14-10-2018 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 SUPERFAMILY SSF81665 8 899 7.19E-111 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMBLS11_15000 fd22b0ae8a00d42aa566b62c2281d1ae 901 SUPERFAMILY SSF81653 120 227 4.45E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 SUPERFAMILY SSF82693 577 676 4.71E-8 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 5.0E-273 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 SUPERFAMILY SSF82866 817 1041 1.57E-55 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 Gene3D G3DSA:1.20.1640.10 12 523 3.9E-284 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 SUPERFAMILY SSF82714 187 274 8.24E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 Gene3D G3DSA:3.30.70.1430 42 828 3.9E-284 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 6.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 348 371 6.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 6.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 6.4E-22 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1042 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 Gene3D G3DSA:3.30.2090.10 183 277 3.9E-284 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 SUPERFAMILY SSF82714 734 818 2.22E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 Gene3D G3DSA:3.30.70.1430 577 677 3.9E-284 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 SUPERFAMILY SSF82693 144 341 4.71E-12 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 SUPERFAMILY SSF82693 43 129 1.94E-21 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 Gene3D G3DSA:3.30.70.1440 678 878 3.9E-284 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 Gene3D G3DSA:3.30.2090.10 732 820 3.9E-284 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 Gene3D G3DSA:1.20.1640.10 524 1035 3.9E-284 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 Gene3D G3DSA:3.30.70.1320 136 344 3.9E-284 T 14-10-2018 AMBLS11_13560 9b7462b971aa431c061fe9018aad98f4 1045 SUPERFAMILY SSF82866 316 516 3.27E-41 T 14-10-2018 AMBLS11_03265 e5998865fb6f387438a226e5178da4ac 366 Pfam PF01966 HD domain 171 292 4.0E-19 T 14-10-2018 IPR006674 HD domain AMBLS11_03265 e5998865fb6f387438a226e5178da4ac 366 SMART SM00448 11 123 2.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03265 e5998865fb6f387438a226e5178da4ac 366 Pfam PF00072 Response regulator receiver domain 13 121 2.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03265 e5998865fb6f387438a226e5178da4ac 366 SUPERFAMILY SSF52172 9 139 2.7E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_03265 e5998865fb6f387438a226e5178da4ac 366 Gene3D G3DSA:3.40.50.2300 1 142 2.8E-39 T 14-10-2018 AMBLS11_03265 e5998865fb6f387438a226e5178da4ac 366 SMART SM00471 165 302 1.8E-7 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_03265 e5998865fb6f387438a226e5178da4ac 366 SUPERFAMILY SSF109604 158 332 2.61E-37 T 14-10-2018 AMBLS11_03265 e5998865fb6f387438a226e5178da4ac 366 Gene3D G3DSA:1.10.3210.10 143 344 3.1E-67 T 14-10-2018 AMBLS11_04785 6458494d894a4062c83350a97ae8feaa 281 Pfam PF00700 Bacterial flagellin C-terminal helical region 196 280 3.7E-27 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_04785 6458494d894a4062c83350a97ae8feaa 281 Gene3D G3DSA:1.20.1330.10 50 232 3.3E-58 T 14-10-2018 AMBLS11_04785 6458494d894a4062c83350a97ae8feaa 281 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.9E-38 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_04785 6458494d894a4062c83350a97ae8feaa 281 Gene3D G3DSA:1.10.8.410 233 280 9.2E-23 T 14-10-2018 AMBLS11_04785 6458494d894a4062c83350a97ae8feaa 281 PRINTS PR00207 Flagellin signature 76 95 9.1E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04785 6458494d894a4062c83350a97ae8feaa 281 PRINTS PR00207 Flagellin signature 37 54 9.1E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04785 6458494d894a4062c83350a97ae8feaa 281 PRINTS PR00207 Flagellin signature 111 134 9.1E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04785 6458494d894a4062c83350a97ae8feaa 281 SUPERFAMILY SSF64518 1 280 2.09E-89 T 14-10-2018 AMBLS11_10445 0015f43be0add3e6f54c0e16d8489596 102 SUPERFAMILY SSF81296 12 97 2.52E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_10445 0015f43be0add3e6f54c0e16d8489596 102 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 87 3.9E-7 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMBLS11_10445 0015f43be0add3e6f54c0e16d8489596 102 Gene3D G3DSA:2.60.40.10 3 97 1.9E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 Gene3D G3DSA:1.10.510.10 322 617 3.7E-40 T 14-10-2018 AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 Pfam PF00069 Protein kinase domain 352 586 6.0E-30 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 SUPERFAMILY SSF56112 319 594 1.75E-46 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 SMART SM00219 327 591 0.0038 T 14-10-2018 IPR020635 Tyrosine-protein kinase, catalytic domain GO:0004713|GO:0006468 AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 SMART SM00332 9 249 5.3E-10 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 SUPERFAMILY SSF81606 18 251 4.05E-35 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 456 468 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 Gene3D G3DSA:3.60.40.10 11 252 1.5E-36 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 SMART SM00331 23 251 3.7E-4 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_06960 85c9fc02dc02f810c220bc6699133277 636 Pfam PF13672 Protein phosphatase 2C 27 209 3.4E-17 T 14-10-2018 AMBLS11_06855 f3412824ef23c7570572fb1d7540c788 193 Gene3D G3DSA:3.40.50.1470 1 193 3.0E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AMBLS11_06855 f3412824ef23c7570572fb1d7540c788 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 1.8E-50 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMBLS11_06855 f3412824ef23c7570572fb1d7540c788 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMBLS11_06855 f3412824ef23c7570572fb1d7540c788 193 SUPERFAMILY SSF53178 4 190 7.32E-64 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AMBLS11_06855 f3412824ef23c7570572fb1d7540c788 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 1.5E-63 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMBLS11_06855 f3412824ef23c7570572fb1d7540c788 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 32.38 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMBLS11_01645 125ddac9d60d22b01a1eef8244cc8ded 334 SMART SM00354 1 71 1.5E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_01645 125ddac9d60d22b01a1eef8244cc8ded 334 SUPERFAMILY SSF47413 1 59 4.59E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_01645 125ddac9d60d22b01a1eef8244cc8ded 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 8.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_01645 125ddac9d60d22b01a1eef8244cc8ded 334 Gene3D G3DSA:3.40.50.2300 64 308 2.4E-79 T 14-10-2018 AMBLS11_01645 125ddac9d60d22b01a1eef8244cc8ded 334 SUPERFAMILY SSF53822 63 330 4.89E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_01645 125ddac9d60d22b01a1eef8244cc8ded 334 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.4E-45 T 14-10-2018 AMBLS11_01645 125ddac9d60d22b01a1eef8244cc8ded 334 Gene3D G3DSA:1.10.260.40 1 58 2.2E-20 T 14-10-2018 AMBLS11_01645 125ddac9d60d22b01a1eef8244cc8ded 334 Gene3D G3DSA:3.40.50.2300 160 289 2.4E-79 T 14-10-2018 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 SUPERFAMILY SSF49503 121 321 1.86E-51 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 43 262 1.3E-55 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 Gene3D G3DSA:1.10.287.90 53 124 1.6E-78 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 Gene3D G3DSA:2.60.40.420 125 261 1.6E-78 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 SUPERFAMILY SSF81464 34 123 8.99E-26 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 Gene3D G3DSA:1.10.760.10 269 387 1.7E-29 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 288 362 3.3E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 197 245 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 216 233 2.4E-37 T 14-10-2018 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 196 216 2.4E-37 T 14-10-2018 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 234 251 2.4E-37 T 14-10-2018 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 103 123 2.4E-37 T 14-10-2018 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 125 144 2.4E-37 T 14-10-2018 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 91 103 2.4E-37 T 14-10-2018 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 172 193 2.4E-37 T 14-10-2018 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 SUPERFAMILY SSF46626 284 377 7.34E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 129 249 4.0E-36 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18640 d2f69a42b0f577aa70d8d8a38700719c 387 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 34 114 4.1E-12 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 Gene3D G3DSA:3.30.70.270 323 471 8.0E-20 T 14-10-2018 AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 Gene3D G3DSA:3.20.20.450 487 742 7.4E-87 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 Pfam PF00563 EAL domain 493 728 3.8E-68 T 14-10-2018 IPR001633 EAL domain AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 SUPERFAMILY SSF55073 332 473 7.85E-16 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 SUPERFAMILY SSF141868 499 741 4.45E-80 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 SMART SM00304 268 321 2.9E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 SMART SM00052 486 733 2.7E-99 T 14-10-2018 IPR001633 EAL domain AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 Gene3D G3DSA:1.20.1480.50 231 322 4.8E-10 T 14-10-2018 AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 SMART SM00267 316 475 1.9E-7 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 Pfam PF00990 Diguanylate cyclase, GGDEF domain 327 461 2.7E-14 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 SUPERFAMILY SSF158472 268 318 1.44E-5 T 14-10-2018 AMBLS11_08560 11a8c3ab062e71c6514a13973811cf05 745 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 325 458 4.4E-14 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_17950 0e3bee34e5807dc6e8b9eb331e2c8189 238 Pfam PF09339 IclR helix-turn-helix domain 3 49 2.0E-9 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMBLS11_17950 0e3bee34e5807dc6e8b9eb331e2c8189 238 Gene3D G3DSA:3.30.450.40 70 225 8.1E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_17950 0e3bee34e5807dc6e8b9eb331e2c8189 238 SUPERFAMILY SSF46785 2 65 1.01E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_17950 0e3bee34e5807dc6e8b9eb331e2c8189 238 Gene3D G3DSA:1.10.10.10 1 68 7.8E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_17950 0e3bee34e5807dc6e8b9eb331e2c8189 238 SUPERFAMILY SSF55781 60 224 9.81E-15 T 14-10-2018 AMBLS11_17950 0e3bee34e5807dc6e8b9eb331e2c8189 238 SMART SM00346 1 85 8.1E-7 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMBLS11_09740 8d9fc5b05f688d49d9def5def4a074bc 301 Gene3D G3DSA:3.40.190.10 91 290 3.6E-60 T 14-10-2018 AMBLS11_09740 8d9fc5b05f688d49d9def5def4a074bc 301 Pfam PF03466 LysR substrate binding domain 89 291 1.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_09740 8d9fc5b05f688d49d9def5def4a074bc 301 Gene3D G3DSA:3.40.190.10 163 264 3.6E-60 T 14-10-2018 AMBLS11_09740 8d9fc5b05f688d49d9def5def4a074bc 301 SUPERFAMILY SSF53850 89 297 5.25E-42 T 14-10-2018 AMBLS11_09740 8d9fc5b05f688d49d9def5def4a074bc 301 Gene3D G3DSA:1.10.10.10 3 90 3.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_09740 8d9fc5b05f688d49d9def5def4a074bc 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 7.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_09740 8d9fc5b05f688d49d9def5def4a074bc 301 SUPERFAMILY SSF46785 6 111 3.79E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 SMART SM00086 378 418 0.0075 T 14-10-2018 IPR001610 PAC motif AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 SMART SM00052 600 847 1.9E-56 T 14-10-2018 IPR001633 EAL domain AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 SUPERFAMILY SSF141868 606 849 6.02E-64 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 Gene3D G3DSA:3.20.20.450 589 849 3.2E-73 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 SMART SM00267 418 588 7.5E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 303 421 9.4E-16 T 14-10-2018 IPR000014 PAS domain AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 Pfam PF00990 Diguanylate cyclase, GGDEF domain 429 584 1.4E-34 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 Pfam PF13426 PAS domain 324 417 4.5E-10 T 14-10-2018 IPR000014 PAS domain AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 SUPERFAMILY SSF55073 434 590 4.39E-42 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 Gene3D G3DSA:3.30.450.20 304 416 1.2E-18 T 14-10-2018 AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 Gene3D G3DSA:3.30.70.270 418 588 6.3E-47 T 14-10-2018 AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 SUPERFAMILY SSF55785 296 416 1.01E-15 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 Pfam PF00563 EAL domain 607 842 1.1E-55 T 14-10-2018 IPR001633 EAL domain AMBLS11_00715 4e23c9239727b56dd20baa4013d7c2fc 851 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 425 586 8.3E-37 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_18950 ead7d4a203eefbd9d09110c3354f2f63 156 SUPERFAMILY SSF81573 63 121 1.7E-14 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AMBLS11_18950 ead7d4a203eefbd9d09110c3354f2f63 156 Gene3D G3DSA:1.20.5.620 62 122 2.7E-20 T 14-10-2018 AMBLS11_18950 ead7d4a203eefbd9d09110c3354f2f63 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 7.1E-53 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AMBLS11_18950 ead7d4a203eefbd9d09110c3354f2f63 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.1E-37 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMBLS11_18950 ead7d4a203eefbd9d09110c3354f2f63 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.189 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 Gene3D G3DSA:3.10.350.10 329 396 5.9E-12 T 14-10-2018 IPR036779 LysM domain superfamily AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 SMART SM00257 345 389 8.1E-9 T 14-10-2018 IPR018392 LysM domain AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 Pfam PF01476 LysM domain 346 388 5.1E-10 T 14-10-2018 IPR018392 LysM domain AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 SUPERFAMILY SSF54106 344 388 7.06E-9 T 14-10-2018 AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 SMART SM00028 146 179 3.6E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 SMART SM00028 42 75 3.3E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 SMART SM00028 76 109 0.014 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 SUPERFAMILY SSF81901 47 254 6.54E-25 T 14-10-2018 AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 Pfam PF13424 Tetratricopeptide repeat 112 175 2.2E-7 T 14-10-2018 AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 Pfam PF13432 Tetratricopeptide repeat 47 109 6.9E-7 T 14-10-2018 AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 Gene3D G3DSA:1.25.40.10 37 255 1.6E-44 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12865 48f543316bd8cc85e88d6c1ad466f1c4 396 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 14 245 3.5E-64 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 Pfam PF03099 Biotin/lipoate A/B protein ligase family 91 217 1.3E-19 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 SUPERFAMILY SSF46785 8 62 1.34E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 Gene3D G3DSA:1.10.10.10 4 64 2.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 Gene3D G3DSA:2.30.30.100 280 328 3.4E-16 T 14-10-2018 AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 SUPERFAMILY SSF55681 84 278 6.32E-56 T 14-10-2018 AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 Pfam PF08279 HTH domain 10 61 3.8E-10 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 9 326 30.116 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 Pfam PF02237 Biotin protein ligase C terminal domain 284 326 3.0E-6 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 Gene3D G3DSA:3.30.930.10 70 279 3.7E-58 T 14-10-2018 AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 326 3.2E-57 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_16175 e669cfabaaf5d570499b6ec88cc42888 328 SUPERFAMILY SSF50037 280 326 1.97E-9 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 Pfam PF04552 Sigma-54, DNA binding domain 333 490 1.8E-71 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 7.6E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 PIRSF PIRSF000774 1 493 1.4E-150 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 Pfam PF04963 Sigma-54 factor, core binding domain 127 319 2.8E-59 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 380 399 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 471 478 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 PRINTS PR00045 Sigma-54 factor signature 466 484 1.4E-29 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 PRINTS PR00045 Sigma-54 factor signature 392 404 1.4E-29 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 PRINTS PR00045 Sigma-54 factor signature 202 219 1.4E-29 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 PRINTS PR00045 Sigma-54 factor signature 408 419 1.4E-29 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 Gene3D G3DSA:1.10.10.60 433 490 5.6E-24 T 14-10-2018 AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 Gene3D G3DSA:1.10.10.1330 129 266 4.8E-22 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AMBLS11_03590 a944864a3123f692eeb2b3ee0f033915 493 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 490 4.4E-156 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 Gene3D G3DSA:2.60.40.10 353 440 1.5E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 Gene3D G3DSA:2.60.40.10 252 344 3.5E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SUPERFAMILY SSF49373 361 430 5.1E-12 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 Pfam PF02369 Bacterial Ig-like domain (group 1) 262 340 8.3E-8 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 Pfam PF02369 Bacterial Ig-like domain (group 1) 458 529 2.4E-9 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SUPERFAMILY SSF49373 65 143 4.19E-8 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 Gene3D G3DSA:2.60.40.10 150 251 1.5E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 Gene3D G3DSA:2.60.40.10 44 146 1.8E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 Gene3D G3DSA:2.60.40.10 441 534 3.0E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SUPERFAMILY SSF49373 269 342 1.1E-11 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SUPERFAMILY SSF49373 159 253 3.66E-10 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SMART SM00634 51 145 0.3 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SMART SM00634 256 341 3.7E-6 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SMART SM00634 445 538 3.1E-6 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SMART SM00634 158 250 0.027 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SMART SM00634 351 432 0.024 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AMBLS11_07790 79c6f55684287138f3675c93afa8d75d 739 SUPERFAMILY SSF49373 453 531 4.19E-10 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments AMBLS11_14720 e3c779354a6b5183a3e09cc36ffe8ba0 373 Gene3D G3DSA:3.20.20.70 1 372 3.2E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_14720 e3c779354a6b5183a3e09cc36ffe8ba0 373 SUPERFAMILY SSF51395 3 362 5.76E-114 T 14-10-2018 AMBLS11_14720 e3c779354a6b5183a3e09cc36ffe8ba0 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 11 337 5.4E-82 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 Gene3D G3DSA:3.30.450.20 131 246 3.1E-18 T 14-10-2018 AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 433 2.5E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 Gene3D G3DSA:1.10.287.950 247 437 2.7E-49 T 14-10-2018 AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 SUPERFAMILY SSF58104 164 434 1.7E-52 T 14-10-2018 AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 134 4.6E-11 T 14-10-2018 IPR000014 PAS domain AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 261 2.2E-13 T 14-10-2018 IPR000014 PAS domain AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 SMART SM00086 215 257 0.14 T 14-10-2018 IPR001610 PAC motif AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 SMART SM00086 93 135 12.0 T 14-10-2018 IPR001610 PAC motif AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 Gene3D G3DSA:3.30.450.20 19 130 5.0E-12 T 14-10-2018 AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 Pfam PF13426 PAS domain 158 256 1.6E-10 T 14-10-2018 IPR000014 PAS domain AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 Pfam PF13426 PAS domain 30 133 9.3E-11 T 14-10-2018 IPR000014 PAS domain AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 SUPERFAMILY SSF55785 32 129 5.06E-14 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 SMART SM00283 229 433 2.6E-22 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 SMART SM00091 18 87 0.36 T 14-10-2018 IPR000014 PAS domain AMBLS11_15320 3509f4811c2dfcb49ab3e5713e79f5cb 438 SMART SM00091 142 210 4.7 T 14-10-2018 IPR000014 PAS domain AMBLS11_07280 738bf324fb06bfd38af217fcd7453b95 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 76 1.6E-11 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMBLS11_07280 738bf324fb06bfd38af217fcd7453b95 277 Pfam PF01380 SIS domain 121 243 1.9E-8 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMBLS11_07280 738bf324fb06bfd38af217fcd7453b95 277 SUPERFAMILY SSF53697 100 248 1.07E-12 T 14-10-2018 AMBLS11_07280 738bf324fb06bfd38af217fcd7453b95 277 Gene3D G3DSA:3.40.50.10490 95 269 6.7E-24 T 14-10-2018 AMBLS11_07280 738bf324fb06bfd38af217fcd7453b95 277 SUPERFAMILY SSF46689 8 84 1.22E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_07280 738bf324fb06bfd38af217fcd7453b95 277 Gene3D G3DSA:1.10.10.10 3 83 2.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 SUPERFAMILY SSF111369 180 259 1.26E-7 T 14-10-2018 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 SUPERFAMILY SSF111369 36 115 1.06E-7 T 14-10-2018 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 Gene3D G3DSA:2.40.50.100 206 244 1.2E-15 T 14-10-2018 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 Gene3D G3DSA:1.10.287.470 76 109 1.3E-12 T 14-10-2018 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 Gene3D G3DSA:1.10.287.470 110 173 9.2E-7 T 14-10-2018 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 54 74 6.7E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 323 338 6.7E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 Pfam PF13437 HlyD family secretion protein 209 314 4.1E-12 T 14-10-2018 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 SUPERFAMILY SSF111369 111 172 4.84E-6 T 14-10-2018 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 Pfam PF13533 Biotin-lipoyl like 45 89 2.9E-13 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 Gene3D G3DSA:1.10.287.470 176 205 1.2E-15 T 14-10-2018 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 Gene3D G3DSA:2.40.50.100 42 75 1.3E-12 T 14-10-2018 AMBLS11_00415 8475ae20f722a7e934af5b249ecb683e 354 Gene3D G3DSA:2.40.30.170 245 299 1.2E-15 T 14-10-2018 AMBLS11_16475 6483e98f90e3aaf58945bad91d5d6ec3 93 Pfam PF13670 Peptidase propeptide and YPEB domain 8 91 2.6E-25 T 14-10-2018 IPR025711 PepSY domain AMBLS11_16475 6483e98f90e3aaf58945bad91d5d6ec3 93 SUPERFAMILY SSF54593 23 83 5.63E-5 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_06690 0dce4fbc8f185b0c58f81abc4a762e22 634 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 56 1.5E-14 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AMBLS11_06690 0dce4fbc8f185b0c58f81abc4a762e22 634 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMBLS11_06690 0dce4fbc8f185b0c58f81abc4a762e22 634 Gene3D G3DSA:3.30.300.30 496 625 1.6E-26 T 14-10-2018 AMBLS11_06690 0dce4fbc8f185b0c58f81abc4a762e22 634 Gene3D G3DSA:3.40.50.12780 29 493 1.1E-104 T 14-10-2018 AMBLS11_06690 0dce4fbc8f185b0c58f81abc4a762e22 634 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 588 3.6E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMBLS11_06690 0dce4fbc8f185b0c58f81abc4a762e22 634 SUPERFAMILY SSF56801 3 615 2.35E-156 T 14-10-2018 AMBLS11_06690 0dce4fbc8f185b0c58f81abc4a762e22 634 Pfam PF00501 AMP-binding enzyme 61 500 6.7E-84 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 SUPERFAMILY SSF55785 35 128 4.01E-12 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 SMART SM00283 248 435 1.1E-17 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 SMART SM00091 20 89 30.0 T 14-10-2018 IPR000014 PAS domain AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 SMART SM00091 142 212 0.57 T 14-10-2018 IPR000014 PAS domain AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 Gene3D G3DSA:1.10.287.950 251 438 4.6E-48 T 14-10-2018 AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 SMART SM00086 217 259 0.0011 T 14-10-2018 IPR001610 PAC motif AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 Pfam PF13426 PAS domain 36 126 8.4E-6 T 14-10-2018 IPR000014 PAS domain AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 Pfam PF13426 PAS domain 158 252 1.7E-12 T 14-10-2018 IPR000014 PAS domain AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 Gene3D G3DSA:3.30.450.20 7 127 1.2E-10 T 14-10-2018 AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 Gene3D G3DSA:3.30.450.20 128 250 5.7E-21 T 14-10-2018 AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 276 433 2.5E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 SUPERFAMILY SSF55785 155 259 4.01E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 263 5.4E-15 T 14-10-2018 IPR000014 PAS domain AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 131 1.5E-10 T 14-10-2018 IPR000014 PAS domain AMBLS11_03000 cfe4322fb2592bee35a27cc6347a45f1 438 SUPERFAMILY SSF58104 251 435 4.05E-51 T 14-10-2018 AMBLS11_01760 6e6ed7e7e12fd65a260251d2ce275144 63 Pfam PF00831 Ribosomal L29 protein 5 60 5.7E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01760 6e6ed7e7e12fd65a260251d2ce275144 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.702 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01760 6e6ed7e7e12fd65a260251d2ce275144 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.2E-22 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01760 6e6ed7e7e12fd65a260251d2ce275144 63 SUPERFAMILY SSF46561 1 61 4.06E-22 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01760 6e6ed7e7e12fd65a260251d2ce275144 63 Gene3D G3DSA:1.10.287.310 1 63 5.5E-29 T 14-10-2018 AMBLS11_03805 6a7693363638beb7944aa39b653fd293 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 460 8.7E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03805 6a7693363638beb7944aa39b653fd293 474 SUPERFAMILY SSF47384 239 320 5.49E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_03805 6a7693363638beb7944aa39b653fd293 474 SUPERFAMILY SSF55874 330 470 8.64E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03805 6a7693363638beb7944aa39b653fd293 474 SMART SM00387 361 474 5.4E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03805 6a7693363638beb7944aa39b653fd293 474 Gene3D G3DSA:1.10.287.130 205 322 3.2E-8 T 14-10-2018 AMBLS11_03805 6a7693363638beb7944aa39b653fd293 474 Gene3D G3DSA:3.30.565.10 325 474 2.0E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03805 6a7693363638beb7944aa39b653fd293 474 SMART SM00388 255 321 0.0012 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_02265 2c2035020cdfaf3eccf5fde14ddfe7cc 165 SUPERFAMILY SSF55021 2 76 4.58E-22 T 14-10-2018 AMBLS11_02265 2c2035020cdfaf3eccf5fde14ddfe7cc 165 SUPERFAMILY SSF55021 79 163 7.63E-25 T 14-10-2018 AMBLS11_02265 2c2035020cdfaf3eccf5fde14ddfe7cc 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-33 T 14-10-2018 AMBLS11_02265 2c2035020cdfaf3eccf5fde14ddfe7cc 165 Pfam PF13710 ACT domain 11 73 1.7E-16 T 14-10-2018 AMBLS11_02265 2c2035020cdfaf3eccf5fde14ddfe7cc 165 Gene3D G3DSA:3.30.70.260 1 78 8.8E-34 T 14-10-2018 AMBLS11_02265 2c2035020cdfaf3eccf5fde14ddfe7cc 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 160 3.2E-59 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMBLS11_02265 2c2035020cdfaf3eccf5fde14ddfe7cc 165 Gene3D G3DSA:3.30.70.1150 80 158 3.9E-26 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AMBLS11_02265 2c2035020cdfaf3eccf5fde14ddfe7cc 165 Pfam PF10369 Small subunit of acetolactate synthase 84 159 5.1E-24 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 SUPERFAMILY SSF55545 239 345 2.88E-14 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 Gene3D G3DSA:3.20.20.80 344 788 1.2E-138 T 14-10-2018 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 SUPERFAMILY SSF49384 34 206 1.84E-26 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 Pfam PF03173 Putative carbohydrate binding domain 44 202 1.1E-26 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 263 342 8.6E-10 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 Gene3D G3DSA:3.30.379.10 216 343 5.6E-13 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 PRINTS PR00738 Glycosyl hydrolase family 20 signature 512 530 2.8E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 PRINTS PR00738 Glycosyl hydrolase family 20 signature 539 552 2.8E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 PRINTS PR00738 Glycosyl hydrolase family 20 signature 369 390 2.8E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 PRINTS PR00738 Glycosyl hydrolase family 20 signature 307 327 2.8E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 PRINTS PR00738 Glycosyl hydrolase family 20 signature 446 463 2.8E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 PRINTS PR00738 Glycosyl hydrolase family 20 signature 340 357 2.8E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 PRINTS PR00738 Glycosyl hydrolase family 20 signature 704 720 2.8E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 PRINTS PR00738 Glycosyl hydrolase family 20 signature 722 739 2.8E-42 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 Gene3D G3DSA:2.60.40.290 33 166 4.9E-19 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 SUPERFAMILY SSF51445 346 747 5.05E-117 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 SUPERFAMILY SSF81296 759 848 1.02E-10 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 346 739 2.1E-88 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 Gene3D G3DSA:2.60.40.10 789 850 8.9E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 778 846 1.7E-9 T 14-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMBLS11_13775 98810271ab1f199428337f2c426b365a 850 SMART SM01081 42 204 3.5E-32 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 7.0E-157 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 59.896 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 Gene3D G3DSA:3.30.499.20 4 285 5.1E-98 T 14-10-2018 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 Gene3D G3DSA:3.30.499.10 325 466 3.7E-51 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 SUPERFAMILY SSF53732 2 464 1.31E-161 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 463 5.3E-246 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 ProSitePatterns PS01244 Aconitase family signature 2. 398 411 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 PRINTS PR00415 Aconitase family signature 342 353 2.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 PRINTS PR00415 Aconitase family signature 107 115 2.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 PRINTS PR00415 Aconitase family signature 118 131 2.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 PRINTS PR00415 Aconitase family signature 194 207 2.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 PRINTS PR00415 Aconitase family signature 285 299 2.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 PRINTS PR00415 Aconitase family signature 398 411 2.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 PRINTS PR00415 Aconitase family signature 81 94 2.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 PRINTS PR00415 Aconitase family signature 208 221 2.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 PRINTS PR00415 Aconitase family signature 132 147 2.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_04235 d3ed98fca1a83f67454b1e53d7d45bce 466 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 Pfam PF09330 D-lactate dehydrogenase, membrane binding 276 565 9.5E-134 T 14-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 Gene3D G3DSA:3.30.43.10 11 103 2.3E-122 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 PIRSF PIRSF000101 2 567 3.8E-270 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 8 566 57.33 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 SUPERFAMILY SSF56176 8 271 1.36E-71 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 Gene3D G3DSA:3.30.43.10 518 565 3.2E-74 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 Gene3D G3DSA:3.30.70.610 267 311 2.3E-122 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 Gene3D G3DSA:3.30.465.10 104 266 2.3E-122 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 Gene3D G3DSA:3.30.70.610 374 432 3.2E-74 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 Gene3D G3DSA:3.30.1370.20 433 517 3.2E-74 T 14-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 Pfam PF01565 FAD binding domain 45 181 2.1E-8 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMBLS11_15365 3f2e9691b61ae332b3b5471b70e0e162 577 SUPERFAMILY SSF55103 274 565 1.16E-108 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMBLS11_06620 f693ee68aa6d480545e903cedfbdcbdf 413 Gene3D G3DSA:3.40.50.1970 18 210 2.8E-53 T 14-10-2018 AMBLS11_06620 f693ee68aa6d480545e903cedfbdcbdf 413 Gene3D G3DSA:1.20.1090.10 211 413 5.7E-64 T 14-10-2018 AMBLS11_06620 f693ee68aa6d480545e903cedfbdcbdf 413 SUPERFAMILY SSF56796 32 411 1.83E-120 T 14-10-2018 AMBLS11_06620 f693ee68aa6d480545e903cedfbdcbdf 413 Pfam PF00465 Iron-containing alcohol dehydrogenase 35 404 8.4E-116 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMBLS11_06620 f693ee68aa6d480545e903cedfbdcbdf 413 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 199 227 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 SUPERFAMILY SSF55120 68 232 9.83E-39 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 Pfam PF01479 S4 domain 8 52 7.7E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 Gene3D G3DSA:3.10.290.10 2 60 6.4E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 Gene3D G3DSA:3.30.70.580 72 230 6.4E-54 T 14-10-2018 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 Pfam PF00849 RNA pseudouridylate synthase 71 196 5.9E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 75 227 6.6E-45 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 Gene3D G3DSA:3.30.70.1560 136 209 6.4E-54 T 14-10-2018 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 SUPERFAMILY SSF55174 8 59 2.86E-13 T 14-10-2018 AMBLS11_08105 2d3e287e782d30e78bc1125073a004ae 252 SMART SM00363 7 64 1.9E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Gene3D G3DSA:3.40.50.2300 781 910 7.5E-31 T 14-10-2018 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SMART SM00086 216 258 56.0 T 14-10-2018 IPR001610 PAC motif AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SMART SM00086 348 390 0.12 T 14-10-2018 IPR001610 PAC motif AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Pfam PF00072 Response regulator receiver domain 793 903 4.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Gene3D G3DSA:1.10.287.130 393 473 2.1E-26 T 14-10-2018 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SUPERFAMILY SSF47384 395 476 1.63E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Gene3D G3DSA:3.30.565.10 476 635 5.8E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Gene3D G3DSA:3.30.450.20 267 392 5.9E-19 T 14-10-2018 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Pfam PF00989 PAS fold 273 387 7.5E-10 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Gene3D G3DSA:3.30.450.20 146 266 9.8E-19 T 14-10-2018 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Pfam PF00512 His Kinase A (phospho-acceptor) domain 410 474 3.7E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SUPERFAMILY SSF55785 255 388 6.63E-21 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SUPERFAMILY SSF55785 156 258 1.31E-15 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SMART SM00091 140 211 0.0096 T 14-10-2018 IPR000014 PAS domain AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SMART SM00091 270 336 1.2E-7 T 14-10-2018 IPR000014 PAS domain AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SMART SM00388 410 475 7.2E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 269 397 2.1E-13 T 14-10-2018 IPR000014 PAS domain AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 156 265 3.0E-9 T 14-10-2018 IPR000014 PAS domain AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 630 6.8E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 611 6.8E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 572 6.8E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 586 6.8E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SUPERFAMILY SSF55874 464 636 7.47E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SMART SM00448 791 903 2.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Pfam PF13426 PAS domain 155 257 6.9E-9 T 14-10-2018 IPR000014 PAS domain AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SMART SM00387 522 633 2.5E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 SUPERFAMILY SSF52172 791 915 6.97E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_03270 e9f1793c78852aa53b21cd68dcf5527a 1099 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 522 630 6.2E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02210 fb7ba83009f54c539946c4679a8f945e 347 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 331 5.5E-87 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AMBLS11_02210 fb7ba83009f54c539946c4679a8f945e 347 Pfam PF03193 RsgA GTPase 99 274 1.9E-56 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AMBLS11_02210 fb7ba83009f54c539946c4679a8f945e 347 SUPERFAMILY SSF52540 113 337 3.63E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02210 fb7ba83009f54c539946c4679a8f945e 347 Gene3D G3DSA:1.10.40.50 274 343 2.0E-23 T 14-10-2018 AMBLS11_02210 fb7ba83009f54c539946c4679a8f945e 347 Gene3D G3DSA:2.40.50.140 39 101 5.3E-20 T 14-10-2018 AMBLS11_02210 fb7ba83009f54c539946c4679a8f945e 347 Gene3D G3DSA:3.40.50.300 102 273 2.9E-49 T 14-10-2018 AMBLS11_02210 fb7ba83009f54c539946c4679a8f945e 347 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 338 36.343 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AMBLS11_17325 4aceb4745843282e7163e7bc38c517d2 380 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMBLS11_17325 4aceb4745843282e7163e7bc38c517d2 380 Pfam PF13484 4Fe-4S double cluster binding domain 195 258 9.2E-20 T 14-10-2018 AMBLS11_17325 4aceb4745843282e7163e7bc38c517d2 380 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 16 351 1.7E-154 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AMBLS11_17325 4aceb4745843282e7163e7bc38c517d2 380 SUPERFAMILY SSF54862 171 286 8.79E-18 T 14-10-2018 AMBLS11_17325 4aceb4745843282e7163e7bc38c517d2 380 Pfam PF08331 Domain of unknown function (DUF1730) 64 142 1.8E-24 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AMBLS11_17325 4aceb4745843282e7163e7bc38c517d2 380 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 9 317 50.353 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 345 2.3E-123 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Gene3D G3DSA:1.10.150.20 434 493 1.3E-20 T 14-10-2018 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 368 417 2.9E-21 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 491 9.4E-15 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Pfam PF13184 NusA-like KH domain 233 300 3.1E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Pfam PF00575 S1 RNA binding domain 135 197 1.2E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 SUPERFAMILY SSF50249 135 202 1.65E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 SUPERFAMILY SSF47794 432 494 3.3E-15 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 SUPERFAMILY SSF54814 203 281 2.09E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Pfam PF08529 NusA N-terminal domain 4 127 5.7E-33 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Gene3D G3DSA:3.30.300.20 202 280 8.1E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Gene3D G3DSA:3.30.1480.10 1 132 8.8E-40 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 SUPERFAMILY SSF47794 357 419 2.51E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Gene3D G3DSA:2.40.50.140 138 201 4.7E-18 T 14-10-2018 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 SMART SM00316 136 203 7.6E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Gene3D G3DSA:1.10.150.20 356 424 2.4E-26 T 14-10-2018 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 SUPERFAMILY SSF69705 1 128 2.22E-36 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 SUPERFAMILY SSF54814 282 346 2.88E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 413 28.614 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Gene3D G3DSA:3.30.300.20 281 347 1.8E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMBLS11_08075 5958c2cf39561e6d8613f6a1a21a2208 498 Pfam PF14520 Helix-hairpin-helix domain 435 489 1.6E-5 T 14-10-2018 AMBLS11_18200 2e8dbe6b00ea7d5fd87ad6e604a614a3 390 Pfam PF07690 Major Facilitator Superfamily 10 328 5.5E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_18200 2e8dbe6b00ea7d5fd87ad6e604a614a3 390 SUPERFAMILY SSF103473 3 386 9.16E-42 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_18200 2e8dbe6b00ea7d5fd87ad6e604a614a3 390 Gene3D G3DSA:1.20.1250.20 2 188 3.5E-20 T 14-10-2018 AMBLS11_18200 2e8dbe6b00ea7d5fd87ad6e604a614a3 390 Gene3D G3DSA:1.20.1250.20 197 384 1.1E-20 T 14-10-2018 AMBLS11_17145 8b25e2a2abce57a889e612be620773a5 235 Gene3D G3DSA:3.40.50.720 4 235 6.8E-46 T 14-10-2018 AMBLS11_17145 8b25e2a2abce57a889e612be620773a5 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_17145 8b25e2a2abce57a889e612be620773a5 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_17145 8b25e2a2abce57a889e612be620773a5 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_17145 8b25e2a2abce57a889e612be620773a5 235 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 233 9.7E-26 T 14-10-2018 AMBLS11_17145 8b25e2a2abce57a889e612be620773a5 235 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_17145 8b25e2a2abce57a889e612be620773a5 235 SUPERFAMILY SSF51735 5 234 1.07E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_06155 56f9217078d1a6f245850d1d5b4c950b 188 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 84 187 1.2E-43 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 AMBLS11_06155 56f9217078d1a6f245850d1d5b4c950b 188 ProSitePatterns PS01068 OmpA-like domain. 119 163 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMBLS11_06155 56f9217078d1a6f245850d1d5b4c950b 188 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 187 29.975 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 AMBLS11_06155 56f9217078d1a6f245850d1d5b4c950b 188 Gene3D G3DSA:3.30.1330.60 56 187 2.3E-43 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_06155 56f9217078d1a6f245850d1d5b4c950b 188 SUPERFAMILY SSF103088 73 185 7.19E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_06155 56f9217078d1a6f245850d1d5b4c950b 188 Pfam PF00691 OmpA family 86 181 3.3E-24 T 14-10-2018 IPR006665 OmpA-like domain AMBLS11_06155 56f9217078d1a6f245850d1d5b4c950b 188 PRINTS PR01021 OMPA domain signature 87 109 4.7E-21 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_06155 56f9217078d1a6f245850d1d5b4c950b 188 PRINTS PR01021 OMPA domain signature 132 148 4.7E-21 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_06155 56f9217078d1a6f245850d1d5b4c950b 188 PRINTS PR01021 OMPA domain signature 117 132 4.7E-21 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_04340 5a7f8d0e5f54c9588a41aa0c570fa4c8 207 SMART SM00382 26 206 2.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04340 5a7f8d0e5f54c9588a41aa0c570fa4c8 207 SUPERFAMILY SSF52540 2 190 4.09E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04340 5a7f8d0e5f54c9588a41aa0c570fa4c8 207 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 194 1.2E-68 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 AMBLS11_04340 5a7f8d0e5f54c9588a41aa0c570fa4c8 207 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_04340 5a7f8d0e5f54c9588a41aa0c570fa4c8 207 Gene3D G3DSA:3.40.50.300 1 204 1.3E-43 T 14-10-2018 AMBLS11_04340 5a7f8d0e5f54c9588a41aa0c570fa4c8 207 Pfam PF00005 ABC transporter 18 158 6.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 37 469 61.817 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 173 193 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 Pfam PF04055 Radical SAM superfamily 175 352 4.6E-31 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 Gene3D G3DSA:3.40.50.12160 37 164 2.1E-30 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 39 466 4.2E-103 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 38 466 3.9E-179 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 SMART SM00729 169 394 1.5E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 Gene3D G3DSA:2.40.50.140 409 476 2.0E-15 T 14-10-2018 AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 Gene3D G3DSA:3.80.30.20 167 408 2.9E-74 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 SUPERFAMILY SSF102114 133 399 6.8E-55 T 14-10-2018 AMBLS11_08840 78870ecc694ff4ab3c600ea876a33c33 484 Pfam PF00919 Uncharacterized protein family UPF0004 38 129 9.0E-22 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 SUPERFAMILY SSF82693 46 128 2.17E-21 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Gene3D G3DSA:3.30.70.1440 718 921 1.9E-134 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 SUPERFAMILY SSF82714 188 270 1.7E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Gene3D G3DSA:1.20.1640.10 13 433 4.7E-115 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 SUPERFAMILY SSF82693 149 331 4.19E-20 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Gene3D G3DSA:3.30.2090.10 185 278 4.7E-115 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Gene3D G3DSA:1.20.1640.10 561 1088 1.9E-134 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Gene3D G3DSA:3.30.2090.10 769 857 1.9E-134 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Gene3D G3DSA:3.30.70.1430 615 717 1.9E-134 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Gene3D G3DSA:3.30.70.1430 42 134 4.7E-115 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Gene3D G3DSA:3.30.70.1320 135 332 4.7E-115 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 SUPERFAMILY SSF82866 854 1096 5.62E-40 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 SUPERFAMILY SSF82714 769 853 3.53E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Gene3D G3DSA:1.20.1640.10 480 560 1.9E-134 T 14-10-2018 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.7E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.7E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 5.7E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.7E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 5.7E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 Pfam PF00873 AcrB/AcrD/AcrF family 6 1092 1.7E-229 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_14105 abe0b99764decc7be31854d71fc1e4ed 1097 SUPERFAMILY SSF82866 297 551 6.45E-37 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Gene3D G3DSA:1.20.1640.10 585 1094 1.6E-142 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 SUPERFAMILY SSF82693 41 131 3.4E-20 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Gene3D G3DSA:3.30.2090.10 792 880 1.6E-142 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 SUPERFAMILY SSF82866 294 509 7.72E-43 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 9.3E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 9.3E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.3E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.3E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 9.3E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Gene3D G3DSA:3.30.70.1430 40 131 1.2E-161 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Gene3D G3DSA:3.30.70.1320 132 330 1.2E-161 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 SUPERFAMILY SSF82866 879 1098 3.79E-53 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Gene3D G3DSA:3.30.70.1430 639 744 1.6E-142 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 SUPERFAMILY SSF82714 188 268 1.7E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Gene3D G3DSA:3.30.2090.10 183 273 1.2E-161 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Pfam PF00873 AcrB/AcrD/AcrF family 582 1097 1.2E-111 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Pfam PF00873 AcrB/AcrD/AcrF family 4 519 1.9E-139 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Gene3D G3DSA:3.30.70.1440 745 937 1.6E-142 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Gene3D G3DSA:1.20.1640.10 10 528 1.2E-161 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 Gene3D G3DSA:1.20.1640.10 529 569 1.2E-161 T 14-10-2018 AMBLS11_10530 79a454899256f34b2cee0eb08f6afbe0 1127 SUPERFAMILY SSF82714 793 879 1.29E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 8.6E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 SUPERFAMILY SSF47203 234 387 2.26E-47 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 2.6E-43 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 3.1E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 Gene3D G3DSA:2.40.110.10 128 241 9.6E-47 T 14-10-2018 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 Gene3D G3DSA:1.20.140.10 242 389 6.1E-47 T 14-10-2018 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 PIRSF PIRSF016578 135 389 2.8E-10 T 14-10-2018 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 PIRSF PIRSF016578 15 101 0.026 T 14-10-2018 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 Gene3D G3DSA:1.10.540.10 2 127 9.0E-47 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMBLS11_07650 9a4024bdbe160b523ea2bad49716e3d8 389 SUPERFAMILY SSF56645 6 249 3.93E-87 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_02350 a94896acd88b7af14501dd7d3d651641 378 Pfam PF02222 ATP-grasp domain 101 274 2.0E-48 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AMBLS11_02350 a94896acd88b7af14501dd7d3d651641 378 SUPERFAMILY SSF52440 1 87 9.35E-15 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMBLS11_02350 a94896acd88b7af14501dd7d3d651641 378 Gene3D G3DSA:3.30.1490.20 97 174 8.6E-16 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_02350 a94896acd88b7af14501dd7d3d651641 378 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 350 2.5E-105 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMBLS11_02350 a94896acd88b7af14501dd7d3d651641 378 SUPERFAMILY SSF56059 92 295 3.18E-56 T 14-10-2018 AMBLS11_02350 a94896acd88b7af14501dd7d3d651641 378 Gene3D G3DSA:3.40.50.20 1 96 7.8E-16 T 14-10-2018 AMBLS11_02350 a94896acd88b7af14501dd7d3d651641 378 SUPERFAMILY SSF51246 299 369 6.59E-17 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMBLS11_02350 a94896acd88b7af14501dd7d3d651641 378 Gene3D G3DSA:3.30.470.20 176 367 2.0E-73 T 14-10-2018 AMBLS11_02350 a94896acd88b7af14501dd7d3d651641 378 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 347 36.075 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMBLS11_05915 d93638dce5fab875a46e06dcb3ff2bf3 1240 Pfam PF12128 Protein of unknown function (DUF3584) 8 1202 0.0 T 14-10-2018 IPR021979 Protein of unknown function DUF3584 AMBLS11_13420 b357a623a249a35559d3ebb20af69eb9 266 Gene3D G3DSA:1.10.10.10 10 82 5.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 SMART SM00345 12 71 5.8E-24 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 6.1E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 Pfam PF07840 FadR C-terminal domain 72 234 6.4E-65 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 Gene3D G3DSA:1.20.120.530 80 236 3.9E-35 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 SUPERFAMILY SSF48008 79 230 3.27E-53 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 Gene3D G3DSA:1.10.10.10 1 79 3.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 SUPERFAMILY SSF46785 11 87 6.08E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 236 146.617 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AMBLS11_11680 55309ae432afd6266d6c46c22438ecc1 236 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 2.3E-112 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AMBLS11_07760 95d2596370732a4b5e94f36d35066745 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 5.6E-99 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_07760 95d2596370732a4b5e94f36d35066745 239 SMART SM00479 2 176 3.1E-51 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_07760 95d2596370732a4b5e94f36d35066745 239 Gene3D G3DSA:3.30.420.10 1 183 4.2E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_07760 95d2596370732a4b5e94f36d35066745 239 Gene3D G3DSA:3.20.20.140 198 239 1.5E-5 T 14-10-2018 AMBLS11_07760 95d2596370732a4b5e94f36d35066745 239 Pfam PF00929 Exonuclease 4 167 6.0E-42 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_07760 95d2596370732a4b5e94f36d35066745 239 SUPERFAMILY SSF53098 1 177 3.8E-58 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_07760 95d2596370732a4b5e94f36d35066745 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 215 3.1E-78 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 Pfam PF13432 Tetratricopeptide repeat 150 202 0.0029 T 14-10-2018 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 Pfam PF14559 Tetratricopeptide repeat 259 319 9.8E-6 T 14-10-2018 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 Gene3D G3DSA:1.25.40.10 2 144 5.7E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 Gene3D G3DSA:1.25.40.10 148 406 2.7E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 Gene3D G3DSA:3.40.50.300 407 652 1.6E-59 T 14-10-2018 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 SUPERFAMILY SSF52540 401 639 7.21E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 SMART SM00028 43 76 9.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 SMART SM00028 245 278 54.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 SMART SM00028 350 383 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 SMART SM00028 177 210 44.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 SMART SM00028 279 312 0.0057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 SMART SM00028 77 110 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 SUPERFAMILY SSF48452 34 322 6.45E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_08280 a43017c5f5fecbaadaef0cc1c7b234cc 653 Pfam PF13469 Sulfotransferase family 418 604 9.7E-43 T 14-10-2018 AMBLS11_08710 daeca637db857fcd902caf99f8d54f5f 134 Pfam PF01124 MAPEG family 6 128 2.8E-14 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMBLS11_08710 daeca637db857fcd902caf99f8d54f5f 134 Gene3D G3DSA:1.20.120.550 4 133 1.1E-10 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMBLS11_08710 daeca637db857fcd902caf99f8d54f5f 134 SUPERFAMILY SSF161084 7 125 1.96E-19 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMBLS11_07685 8560d1fd499d6d6439711aac8924052c 476 Pfam PF00929 Exonuclease 7 188 1.3E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_07685 8560d1fd499d6d6439711aac8924052c 476 SMART SM00479 5 198 0.0017 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_07685 8560d1fd499d6d6439711aac8924052c 476 PIRSF PIRSF000977 1 476 5.6E-182 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AMBLS11_07685 8560d1fd499d6d6439711aac8924052c 476 Gene3D G3DSA:1.20.1280.70 354 416 1.7E-15 T 14-10-2018 AMBLS11_07685 8560d1fd499d6d6439711aac8924052c 476 Gene3D G3DSA:3.30.420.10 2 196 7.4E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_07685 8560d1fd499d6d6439711aac8924052c 476 Gene3D G3DSA:2.30.30.450 209 349 8.6E-42 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily AMBLS11_07685 8560d1fd499d6d6439711aac8924052c 476 SUPERFAMILY SSF53098 5 476 3.63E-121 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_07685 8560d1fd499d6d6439711aac8924052c 476 Pfam PF08411 Exonuclease C-terminal 207 474 5.3E-86 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 Gene3D G3DSA:3.40.50.300 281 552 8.2E-63 T 14-10-2018 AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 SUPERFAMILY SSF52540 311 515 1.24E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 Pfam PF12848 ABC transporter 224 294 3.3E-13 T 14-10-2018 IPR032781 ABC-transporter extension domain AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 SMART SM00382 344 515 6.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 SMART SM00382 28 230 6.7E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 Pfam PF00005 ABC transporter 19 185 1.2E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 Gene3D G3DSA:1.10.287.380 560 643 1.5E-24 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 Pfam PF16326 ABC transporter C-terminal domain 570 638 2.4E-18 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 Gene3D G3DSA:3.40.50.300 2 279 4.3E-68 T 14-10-2018 AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 SUPERFAMILY SSF52540 3 244 3.7E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09400 3de1e9694607929bc904fa272ad16bec 646 Pfam PF00005 ABC transporter 336 469 4.6E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_05190 e14bd16578f8f43750241e8b6071f55c 606 SUPERFAMILY SSF51569 1 300 4.4E-85 T 14-10-2018 AMBLS11_05190 e14bd16578f8f43750241e8b6071f55c 606 Gene3D G3DSA:3.20.20.70 1 464 1.2E-164 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_05190 e14bd16578f8f43750241e8b6071f55c 606 SUPERFAMILY SSF51230 534 605 4.97E-20 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_05190 e14bd16578f8f43750241e8b6071f55c 606 Pfam PF02436 Conserved carboxylase domain 292 500 1.8E-58 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AMBLS11_05190 e14bd16578f8f43750241e8b6071f55c 606 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 601 4.2E-258 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AMBLS11_05190 e14bd16578f8f43750241e8b6071f55c 606 Pfam PF00364 Biotin-requiring enzyme 540 604 7.0E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_05190 e14bd16578f8f43750241e8b6071f55c 606 Gene3D G3DSA:2.40.50.100 535 606 7.5E-23 T 14-10-2018 AMBLS11_05190 e14bd16578f8f43750241e8b6071f55c 606 SUPERFAMILY SSF89000 297 462 3.06E-50 T 14-10-2018 AMBLS11_05190 e14bd16578f8f43750241e8b6071f55c 606 Pfam PF00682 HMGL-like 6 270 4.4E-49 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMBLS11_01435 d7eab32f857f82cf2a5785743d9dbb11 71 Pfam PF13127 Protein of unknown function (DUF3955) 7 64 3.4E-14 T 14-10-2018 IPR025016 Protein of unknown function DUF3955 AMBLS11_12530 6988cb619e4102bdbfcadc3190278d37 150 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 143 2.0E-27 T 14-10-2018 AMBLS11_12530 6988cb619e4102bdbfcadc3190278d37 150 PIRSF PIRSF004923 1 150 6.8E-35 T 14-10-2018 IPR026268 Protein RseC AMBLS11_07390 1e212e414101ec9510a1828a0a1705c9 379 Pfam PF13439 Glycosyltransferase Family 4 67 179 3.1E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMBLS11_07390 1e212e414101ec9510a1828a0a1705c9 379 Pfam PF00534 Glycosyl transferases group 1 195 331 8.7E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_07390 1e212e414101ec9510a1828a0a1705c9 379 Gene3D G3DSA:3.40.50.2000 19 368 3.1E-49 T 14-10-2018 AMBLS11_07390 1e212e414101ec9510a1828a0a1705c9 379 Gene3D G3DSA:3.40.50.2000 176 361 3.1E-49 T 14-10-2018 AMBLS11_07390 1e212e414101ec9510a1828a0a1705c9 379 SUPERFAMILY SSF53756 10 378 2.83E-53 T 14-10-2018 AMBLS11_10005 cc482caaa2aa6bc319a525ecc108ea8c 245 Gene3D G3DSA:3.40.50.300 1 174 9.2E-27 T 14-10-2018 AMBLS11_10005 cc482caaa2aa6bc319a525ecc108ea8c 245 Pfam PF00308 Bacterial dnaA protein 15 226 3.1E-13 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AMBLS11_10005 cc482caaa2aa6bc319a525ecc108ea8c 245 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 2 242 1.6E-64 T 14-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AMBLS11_10005 cc482caaa2aa6bc319a525ecc108ea8c 245 SUPERFAMILY SSF52540 10 222 8.44E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10005 cc482caaa2aa6bc319a525ecc108ea8c 245 Gene3D G3DSA:1.10.8.60 177 244 8.7E-19 T 14-10-2018 AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 Gene3D G3DSA:3.30.70.270 817 983 2.0E-52 T 14-10-2018 AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 Gene3D G3DSA:2.130.10.10 29 335 4.7E-52 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 SUPERFAMILY SSF101898 362 632 3.14E-7 T 14-10-2018 AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 SUPERFAMILY SSF55073 829 982 7.85E-44 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 Gene3D G3DSA:2.60.40.10 646 771 1.4E-31 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 Pfam PF00990 Diguanylate cyclase, GGDEF domain 825 979 6.3E-44 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 Gene3D G3DSA:2.130.10.10 391 642 7.1E-29 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 SMART SM00267 813 983 4.5E-50 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 SUPERFAMILY SSF63829 95 328 2.94E-12 T 14-10-2018 AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 821 981 2.4E-48 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07945 ce04d05431ed3d60f80f6fdb32591769 983 Pfam PF07495 Y_Y_Y domain 699 762 6.2E-15 T 14-10-2018 IPR011123 Two component regulator three Y AMBLS11_11215 39428e3b7f0417132179a51830ff5fb8 1333 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 961 1255 1.7E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMBLS11_11215 39428e3b7f0417132179a51830ff5fb8 1333 Gene3D G3DSA:3.60.10.10 958 1262 2.9E-37 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_11215 39428e3b7f0417132179a51830ff5fb8 1333 Pfam PF04231 Endonuclease I 268 483 3.9E-42 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 AMBLS11_11215 39428e3b7f0417132179a51830ff5fb8 1333 SUPERFAMILY SSF63446 1272 1326 2.35E-6 T 14-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 AMBLS11_11215 39428e3b7f0417132179a51830ff5fb8 1333 SUPERFAMILY SSF54060 263 483 4.24E-50 T 14-10-2018 AMBLS11_11215 39428e3b7f0417132179a51830ff5fb8 1333 Pfam PF00932 Lamin Tail Domain 517 626 1.3E-14 T 14-10-2018 IPR001322 Lamin tail domain AMBLS11_11215 39428e3b7f0417132179a51830ff5fb8 1333 Gene3D G3DSA:1.10.1330.10 1272 1329 5.3E-5 T 14-10-2018 AMBLS11_11215 39428e3b7f0417132179a51830ff5fb8 1333 SUPERFAMILY SSF56219 956 1263 7.2E-34 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_15810 86f0eab5dfc2c6f8ffd91fd8cc660400 213 SMART SM00849 12 192 7.0E-37 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_15810 86f0eab5dfc2c6f8ffd91fd8cc660400 213 SUPERFAMILY SSF56281 6 203 1.4E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_15810 86f0eab5dfc2c6f8ffd91fd8cc660400 213 Gene3D G3DSA:3.60.15.10 1 210 3.2E-79 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_15810 86f0eab5dfc2c6f8ffd91fd8cc660400 213 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 6.1E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_16985 55e7370a9771140ed22dbf1497e61248 737 Gene3D G3DSA:2.170.130.10 45 177 7.5E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_16985 55e7370a9771140ed22dbf1497e61248 737 Pfam PF00593 TonB dependent receptor 289 735 2.4E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_16985 55e7370a9771140ed22dbf1497e61248 737 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 737 5.5E-83 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMBLS11_16985 55e7370a9771140ed22dbf1497e61248 737 Gene3D G3DSA:2.40.170.20 180 737 3.4E-100 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_16985 55e7370a9771140ed22dbf1497e61248 737 SUPERFAMILY SSF56935 25 736 2.75E-109 T 14-10-2018 AMBLS11_16985 55e7370a9771140ed22dbf1497e61248 737 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 165 5.6E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_14590 e5d9bb346cb041b12adc1d16f4fc89a9 573 PIRSF PIRSF026631 58 572 1.9E-54 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 AMBLS11_14590 e5d9bb346cb041b12adc1d16f4fc89a9 573 Pfam PF03703 Bacterial PH domain 115 190 3.2E-17 T 14-10-2018 IPR005182 Domain of unknown function DUF304 AMBLS11_14590 e5d9bb346cb041b12adc1d16f4fc89a9 573 Pfam PF03703 Bacterial PH domain 485 559 2.1E-8 T 14-10-2018 IPR005182 Domain of unknown function DUF304 AMBLS11_01055 38d53642c2b222a578b6747f043e4d0b 284 Pfam PF02311 AraC-like ligand binding domain 48 114 9.4E-6 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMBLS11_01055 38d53642c2b222a578b6747f043e4d0b 284 Gene3D G3DSA:2.60.120.280 34 162 9.1E-7 T 14-10-2018 AMBLS11_01055 38d53642c2b222a578b6747f043e4d0b 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMBLS11_01055 38d53642c2b222a578b6747f043e4d0b 284 SUPERFAMILY SSF51215 23 116 1.03E-8 T 14-10-2018 IPR037923 Transcription regulator HTH-like AMBLS11_01055 38d53642c2b222a578b6747f043e4d0b 284 SMART SM00342 197 280 2.4E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_01055 38d53642c2b222a578b6747f043e4d0b 284 Pfam PF12833 Helix-turn-helix domain 203 281 2.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_01055 38d53642c2b222a578b6747f043e4d0b 284 SUPERFAMILY SSF46689 233 282 1.88E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_01055 38d53642c2b222a578b6747f043e4d0b 284 Gene3D G3DSA:1.10.10.60 179 283 7.6E-24 T 14-10-2018 AMBLS11_15225 6eb722990f1324d6f8fedcc2324b2c26 327 Gene3D G3DSA:2.130.10.10 27 227 3.7E-51 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_15225 6eb722990f1324d6f8fedcc2324b2c26 327 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 27 325 3.1E-145 T 14-10-2018 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein AMBLS11_15225 6eb722990f1324d6f8fedcc2324b2c26 327 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 29 63 1.0E-10 T 14-10-2018 IPR011964 YVTN beta-propeller repeat AMBLS11_15225 6eb722990f1324d6f8fedcc2324b2c26 327 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 108 149 6.0E-10 T 14-10-2018 IPR011964 YVTN beta-propeller repeat AMBLS11_15225 6eb722990f1324d6f8fedcc2324b2c26 327 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 288 324 1.7E-12 T 14-10-2018 IPR011964 YVTN beta-propeller repeat AMBLS11_15225 6eb722990f1324d6f8fedcc2324b2c26 327 Gene3D G3DSA:2.130.10.10 228 325 8.6E-19 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_15225 6eb722990f1324d6f8fedcc2324b2c26 327 Pfam PF10282 Lactonase, 7-bladed beta-propeller 185 307 5.8E-5 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller AMBLS11_15225 6eb722990f1324d6f8fedcc2324b2c26 327 SUPERFAMILY SSF50974 5 324 3.53E-72 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AMBLS11_18105 1ffa7290625275c37289a4ee212fc2f5 715 SUPERFAMILY SSF53098 540 704 6.21E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_18105 1ffa7290625275c37289a4ee212fc2f5 715 Gene3D G3DSA:3.30.420.10 538 706 5.1E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_18105 1ffa7290625275c37289a4ee212fc2f5 715 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 542 705 2.1E-36 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_18105 1ffa7290625275c37289a4ee212fc2f5 715 Gene3D G3DSA:3.40.1350.10 457 537 1.5E-7 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMBLS11_18105 1ffa7290625275c37289a4ee212fc2f5 715 SMART SM00479 542 707 2.6E-46 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_18105 1ffa7290625275c37289a4ee212fc2f5 715 Pfam PF08774 VRR-NUC domain 466 535 2.5E-10 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AMBLS11_18105 1ffa7290625275c37289a4ee212fc2f5 715 Pfam PF00929 Exonuclease 544 698 2.6E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_18105 1ffa7290625275c37289a4ee212fc2f5 715 SMART SM00990 449 535 4.0E-16 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AMBLS11_17925 9c92068c2dd8772a220733217d5d5c64 123 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 33 107 7.2E-14 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AMBLS11_17925 9c92068c2dd8772a220733217d5d5c64 123 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 26 122 1.0E-32 T 14-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 Gene3D G3DSA:3.30.70.1440 683 877 1.2E-215 T 14-10-2018 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 SUPERFAMILY SSF82714 730 812 4.71E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 Gene3D G3DSA:1.20.1640.10 25 523 1.2E-215 T 14-10-2018 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 Pfam PF00873 AcrB/AcrD/AcrF family 17 1035 2.5E-140 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 1.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 PRINTS PR00702 Acriflavin resistance protein family signature 21 45 1.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 1.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 1.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 1.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 1.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 1.6E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 SUPERFAMILY SSF82714 200 280 1.83E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 Gene3D G3DSA:3.30.2090.10 731 822 1.2E-215 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 Gene3D G3DSA:1.20.1640.10 524 1033 1.2E-215 T 14-10-2018 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 SUPERFAMILY SSF82866 820 1042 3.27E-32 T 14-10-2018 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 Gene3D G3DSA:3.30.70.1430 51 830 1.2E-215 T 14-10-2018 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 SUPERFAMILY SSF82693 51 143 9.42E-15 T 14-10-2018 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 SUPERFAMILY SSF82693 166 338 3.66E-5 T 14-10-2018 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 Gene3D G3DSA:3.30.70.1320 148 340 1.2E-215 T 14-10-2018 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 Gene3D G3DSA:3.30.70.1430 580 682 1.2E-215 T 14-10-2018 AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 Gene3D G3DSA:3.30.2090.10 195 287 1.2E-215 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01910 d269eaa8f02a43359edd95708a0e715f 1048 SUPERFAMILY SSF82866 318 506 1.7E-31 T 14-10-2018 AMBLS11_06245 5c79e4136f34da14e6cd87c29cd278b7 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMBLS11_06245 5c79e4136f34da14e6cd87c29cd278b7 204 Gene3D G3DSA:1.10.357.10 63 203 3.8E-22 T 14-10-2018 AMBLS11_06245 5c79e4136f34da14e6cd87c29cd278b7 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 2.3E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_06245 5c79e4136f34da14e6cd87c29cd278b7 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_06245 5c79e4136f34da14e6cd87c29cd278b7 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_06245 5c79e4136f34da14e6cd87c29cd278b7 204 Gene3D G3DSA:1.10.10.60 4 60 6.2E-20 T 14-10-2018 AMBLS11_06245 5c79e4136f34da14e6cd87c29cd278b7 204 SUPERFAMILY SSF46689 4 78 7.98E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_06245 5c79e4136f34da14e6cd87c29cd278b7 204 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 152 201 3.8E-5 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 PIRSF PIRSF002811 2 592 1.6E-148 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Pfam PF13662 Toprim domain 262 340 1.5E-13 T 14-10-2018 IPR006171 TOPRIM domain AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 SMART SM00400 36 90 1.3E-38 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Gene3D G3DSA:1.10.860.10 444 592 1.3E-31 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 SUPERFAMILY SSF57783 5 101 2.89E-37 T 14-10-2018 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Pfam PF01807 CHC2 zinc finger 6 101 3.3E-41 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Pfam PF08278 DNA primase DnaG DnaB-binding 461 585 7.2E-27 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Gene3D G3DSA:3.40.1360.10 244 370 5.0E-40 T 14-10-2018 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 SMART SM00493 262 333 3.2E-20 T 14-10-2018 IPR006171 TOPRIM domain AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Gene3D G3DSA:3.90.580.10 1 101 1.2E-38 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Hamap MF_00974 DNA primase [dnaG]. 4 587 28.84 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 3.8E-149 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 SUPERFAMILY SSF117023 456 589 7.45E-32 T 14-10-2018 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Pfam PF10410 DnaB-helicase binding domain of primase 372 423 2.9E-6 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Gene3D G3DSA:1.20.50.20 371 428 4.6E-9 T 14-10-2018 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 SMART SM00766 459 586 7.0E-27 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 SUPERFAMILY SSF56731 119 428 5.49E-108 T 14-10-2018 AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Gene3D G3DSA:3.90.980.10 118 243 7.3E-47 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AMBLS11_03125 f6a7779a4b16e015a883c17bd2e507ba 592 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 254 1.5E-43 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 Gene3D G3DSA:2.30.22.10 141 197 1.2E-25 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 Hamap MF_01151 Protein GrpE [grpE]. 9 197 22.179 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 SUPERFAMILY SSF58014 44 141 2.62E-29 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 ProSitePatterns PS01071 grpE protein signature. 152 195 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 PRINTS PR00773 GrpE protein signature 66 82 2.1E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 PRINTS PR00773 GrpE protein signature 176 195 2.1E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 PRINTS PR00773 GrpE protein signature 149 164 2.1E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 PRINTS PR00773 GrpE protein signature 94 109 2.1E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 Pfam PF01025 GrpE 37 196 6.1E-54 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 SUPERFAMILY SSF51064 143 198 1.09E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AMBLS11_06665 f7e00bf9855d35e4868cbbd420c01a0f 207 Gene3D G3DSA:3.90.20.20 32 140 1.7E-32 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 175 196 2.0E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 295 313 2.0E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 437 458 2.0E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 206 226 2.0E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 335 360 2.0E-38 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 Gene3D G3DSA:3.30.70.420 240 354 3.3E-111 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 144 512 2.7E-121 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 Gene3D G3DSA:3.90.770.10 186 498 3.3E-111 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 SUPERFAMILY SSF55035 241 354 3.14E-39 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_16635 d88a5641b5038701ef24b9b013448373 514 SUPERFAMILY SSF56542 136 501 2.49E-66 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_00065 86632496995167aa82900be9fff1cb15 211 Gene3D G3DSA:3.40.50.300 2 205 1.2E-54 T 14-10-2018 AMBLS11_00065 86632496995167aa82900be9fff1cb15 211 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 195 27.079 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AMBLS11_00065 86632496995167aa82900be9fff1cb15 211 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 3.9E-72 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AMBLS11_00065 86632496995167aa82900be9fff1cb15 211 SUPERFAMILY SSF52540 16 195 4.75E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00065 86632496995167aa82900be9fff1cb15 211 Pfam PF01926 50S ribosome-binding GTPase 26 144 2.3E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_16060 035895f07089f773d90e5528d246f21a 207 SUPERFAMILY SSF50182 105 170 2.22E-7 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_16060 035895f07089f773d90e5528d246f21a 207 Pfam PF00924 Mechanosensitive ion channel 61 170 3.2E-8 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 Pfam PF11604 Copper binding periplasmic protein CusF 456 511 3.5E-12 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 Gene3D G3DSA:2.40.420.20 347 435 2.1E-22 T 14-10-2018 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 Gene3D G3DSA:2.40.30.170 246 346 9.4E-22 T 14-10-2018 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 230 412 8.2E-31 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 Gene3D G3DSA:2.40.30.170 132 145 2.5E-13 T 14-10-2018 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 SUPERFAMILY SSF111369 145 344 6.54E-19 T 14-10-2018 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 Gene3D G3DSA:1.10.287.470 181 217 2.5E-13 T 14-10-2018 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 Gene3D G3DSA:2.40.50.320 436 513 4.6E-9 T 14-10-2018 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 Gene3D G3DSA:2.40.50.100 146 180 2.5E-13 T 14-10-2018 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 Gene3D G3DSA:2.40.420.20 120 131 2.5E-13 T 14-10-2018 AMBLS11_14110 3531b4b3f8e12b477cc0bd3e1e4c534e 565 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 129 340 7.8E-75 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_13295 125b34816ebe7b936714ecb7f40eec96 500 PIRSF PIRSF011396 1 491 2.2E-149 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AMBLS11_13295 125b34816ebe7b936714ecb7f40eec96 500 Pfam PF04820 Tryptophan halogenase 6 458 1.2E-126 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMBLS11_13295 125b34816ebe7b936714ecb7f40eec96 500 Gene3D G3DSA:3.50.50.60 2 487 4.7E-161 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13295 125b34816ebe7b936714ecb7f40eec96 500 SUPERFAMILY SSF51905 2 416 2.96E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 Pfam PF00117 Glutamine amidotransferase class-I 10 198 2.6E-43 T 14-10-2018 IPR017926 Glutamine amidotransferase AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 SUPERFAMILY SSF52317 8 201 4.01E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00097 Anthranilate synthase component II signature 8 22 7.8E-34 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00097 Anthranilate synthase component II signature 59 68 7.8E-34 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00097 Anthranilate synthase component II signature 111 119 7.8E-34 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00097 Anthranilate synthase component II signature 131 143 7.8E-34 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00097 Anthranilate synthase component II signature 86 97 7.8E-34 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00097 Anthranilate synthase component II signature 178 191 7.8E-34 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 86 102 6.1E-5 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 56 70 6.1E-5 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 Gene3D G3DSA:3.40.50.880 7 202 1.6E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00096 Glutamine amidotransferase superfamily signature 59 68 9.6E-14 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00096 Glutamine amidotransferase superfamily signature 178 191 9.6E-14 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 PRINTS PR00096 Glutamine amidotransferase superfamily signature 86 97 9.6E-14 T 14-10-2018 AMBLS11_06535 7cfe6adecca9e108a9ad8ea71376a1ac 210 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 8 198 2.0E-50 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_18415 59d3d9a73051e647f578011ce3ed66e6 243 Pfam PF07277 SapC 7 233 5.0E-64 T 14-10-2018 IPR010836 SapC AMBLS11_14195 02fe242c66c252686eb048748127d710 188 SUPERFAMILY SSF143456 5 188 8.11E-67 T 14-10-2018 AMBLS11_14195 02fe242c66c252686eb048748127d710 188 Pfam PF02622 Uncharacterized ACR, COG1678 16 175 1.2E-52 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 AMBLS11_14195 02fe242c66c252686eb048748127d710 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 5 188 38.229 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 AMBLS11_14195 02fe242c66c252686eb048748127d710 188 Gene3D G3DSA:3.40.1740.10 3 188 4.1E-70 T 14-10-2018 AMBLS11_10645 9b72aa59d5f66431d731e79a3bebc550 250 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 58 238 1.3E-13 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMBLS11_10645 9b72aa59d5f66431d731e79a3bebc550 250 Gene3D G3DSA:3.40.50.1110 55 249 5.2E-20 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMBLS11_10645 9b72aa59d5f66431d731e79a3bebc550 250 SUPERFAMILY SSF52266 53 248 9.62E-28 T 14-10-2018 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 1.9E-63 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 Gene3D G3DSA:3.40.1010.10 216 333 3.7E-48 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 49.921 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 Gene3D G3DSA:3.30.950.10 334 461 4.4E-49 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 SUPERFAMILY SSF51735 1 112 3.94E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 SUPERFAMILY SSF53790 215 459 2.49E-84 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 PIRSF PIRSF036426 1 461 4.5E-193 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 Pfam PF13241 Putative NAD(P)-binding 6 115 1.3E-27 T 14-10-2018 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 Gene3D G3DSA:1.10.8.210 149 210 1.0E-6 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 220 428 6.4E-53 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 298 331 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 2.1E-17 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 218 453 1.1E-96 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 SUPERFAMILY SSF75615 114 207 4.05E-22 T 14-10-2018 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 Gene3D G3DSA:3.40.50.720 1 112 8.4E-34 T 14-10-2018 AMBLS11_02800 c1ee94cee7339d13ed2f986ac64bb27f 461 Gene3D G3DSA:3.30.160.110 113 148 1.1E-16 T 14-10-2018 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Gene3D G3DSA:3.30.70.940 3 125 3.4E-46 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Gene3D G3DSA:2.30.30.30 126 182 9.7E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 ProSitePatterns PS01014 Transcription termination factor nusG signature. 166 175 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 PRINTS PR00338 Transcription termination factor NUSG signature 141 156 1.0E-19 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 PRINTS PR00338 Transcription termination factor NUSG signature 159 175 1.0E-19 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 PRINTS PR00338 Transcription termination factor NUSG signature 63 75 1.0E-19 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 SMART SM00738 8 117 1.3E-46 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 11 182 6.3E-69 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Pfam PF02357 Transcription termination factor nusG 9 114 1.6E-25 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 8 183 24.31 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 SUPERFAMILY SSF50104 127 182 2.21E-18 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 Pfam PF00467 KOW motif 132 162 2.0E-8 T 14-10-2018 IPR005824 KOW AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 SMART SM00739 129 156 7.7E-7 T 14-10-2018 IPR005824 KOW AMBLS11_17055 9bfb56e7c4e38d412ae7bd48bfb49af7 183 SUPERFAMILY SSF82679 8 119 2.22E-38 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMBLS11_02595 f877f88224756ec8dcfc82cfe500fc78 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 59.287 T 14-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 AMBLS11_02595 f877f88224756ec8dcfc82cfe500fc78 443 Gene3D G3DSA:3.40.350.10 1 157 6.9E-67 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMBLS11_02595 f877f88224756ec8dcfc82cfe500fc78 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AMBLS11_02595 f877f88224756ec8dcfc82cfe500fc78 443 SUPERFAMILY SSF55920 161 439 6.28E-59 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMBLS11_02595 f877f88224756ec8dcfc82cfe500fc78 443 Gene3D G3DSA:3.90.230.10 159 442 2.9E-83 T 14-10-2018 AMBLS11_02595 f877f88224756ec8dcfc82cfe500fc78 443 Pfam PF00557 Metallopeptidase family M24 166 429 2.1E-47 T 14-10-2018 IPR000994 Peptidase M24 AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 SUPERFAMILY SSF63411 289 473 1.48E-28 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 Gene3D G3DSA:3.30.830.10 54 276 2.5E-61 T 14-10-2018 AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 Gene3D G3DSA:3.30.830.10 535 743 4.9E-41 T 14-10-2018 AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 SUPERFAMILY SSF63411 756 956 4.83E-38 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 Gene3D G3DSA:3.30.830.10 750 947 9.5E-37 T 14-10-2018 AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 Pfam PF05193 Peptidase M16 inactive domain 698 869 1.9E-18 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 Pfam PF05193 Peptidase M16 inactive domain 226 402 9.8E-27 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 SUPERFAMILY SSF63411 48 279 2.44E-50 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 SUPERFAMILY SSF63411 533 735 3.33E-41 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 Gene3D G3DSA:3.30.830.10 285 478 2.1E-31 T 14-10-2018 AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 Pfam PF00675 Insulinase (Peptidase family M16) 68 160 2.1E-14 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMBLS11_11890 4bbd0283ff7282f9e4c4a4b954973ef6 962 Pfam PF00675 Insulinase (Peptidase family M16) 553 667 9.0E-12 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMBLS11_16240 7ca2d83beee1f226edae410fc5fcde8c 360 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 332 1.6E-96 T 14-10-2018 IPR016040 NAD(P)-binding domain AMBLS11_16240 7ca2d83beee1f226edae410fc5fcde8c 360 Gene3D G3DSA:3.90.25.10 211 340 1.6E-136 T 14-10-2018 AMBLS11_16240 7ca2d83beee1f226edae410fc5fcde8c 360 SUPERFAMILY SSF51735 1 344 4.45E-96 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_16240 7ca2d83beee1f226edae410fc5fcde8c 360 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 346 8.7E-154 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMBLS11_16240 7ca2d83beee1f226edae410fc5fcde8c 360 Gene3D G3DSA:3.40.50.720 5 331 1.6E-136 T 14-10-2018 AMBLS11_12125 76a81f967441ab70734eaa8527603038 421 SUPERFAMILY SSF51905 5 415 2.07E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_12125 76a81f967441ab70734eaa8527603038 421 Gene3D G3DSA:3.50.50.60 1 282 2.9E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_12125 76a81f967441ab70734eaa8527603038 421 Pfam PF01593 Flavin containing amine oxidoreductase 12 280 3.9E-23 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMBLS11_00900 150ff3fa34fba766e762693b55663b93 194 Gene3D G3DSA:1.10.150.240 20 90 5.6E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMBLS11_00900 150ff3fa34fba766e762693b55663b93 194 SUPERFAMILY SSF56784 6 192 1.09E-44 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_00900 150ff3fa34fba766e762693b55663b93 194 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 135 187 2.2E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_00900 150ff3fa34fba766e762693b55663b93 194 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 7 187 2.4E-48 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase AMBLS11_00900 150ff3fa34fba766e762693b55663b93 194 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 187 1.7E-22 T 14-10-2018 AMBLS11_00900 150ff3fa34fba766e762693b55663b93 194 Gene3D G3DSA:3.40.50.1000 8 190 5.6E-43 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 Gene3D G3DSA:2.60.120.10 2 129 3.1E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 Gene3D G3DSA:3.10.580.10 144 269 3.4E-31 T 14-10-2018 AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 SMART SM00116 155 202 6.4E-6 T 14-10-2018 IPR000644 CBS domain AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 SMART SM00116 219 268 4.1E-7 T 14-10-2018 IPR000644 CBS domain AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 Pfam PF00571 CBS domain 149 201 2.7E-10 T 14-10-2018 IPR000644 CBS domain AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 Pfam PF00571 CBS domain 212 266 2.1E-10 T 14-10-2018 IPR000644 CBS domain AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 SUPERFAMILY SSF54631 149 268 1.52E-28 T 14-10-2018 AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 SUPERFAMILY SSF51206 8 110 1.24E-10 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 465 604 1.0E-35 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AMBLS11_16040 ce3bbfc9ef91601ed01d84c7df034c35 609 Pfam PF03445 Putative nucleotidyltransferase DUF294 294 428 8.0E-36 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AMBLS11_10020 0e2e51655bdf70f8150311d01dca00cc 216 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 7 195 1.4E-73 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AMBLS11_10020 0e2e51655bdf70f8150311d01dca00cc 216 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 7 192 31.557 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AMBLS11_10020 0e2e51655bdf70f8150311d01dca00cc 216 Pfam PF00551 Formyl transferase 7 186 1.7E-60 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_10020 0e2e51655bdf70f8150311d01dca00cc 216 SUPERFAMILY SSF53328 7 206 4.19E-68 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_10020 0e2e51655bdf70f8150311d01dca00cc 216 Gene3D G3DSA:3.40.50.170 6 216 1.2E-86 T 14-10-2018 AMBLS11_11025 d8f569b016f38178c385838a8b06b0c9 317 TIGRFAM TIGR00749 glk: glucokinase 6 308 2.6E-93 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMBLS11_11025 d8f569b016f38178c385838a8b06b0c9 317 Pfam PF02685 Glucokinase 6 313 9.2E-109 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMBLS11_11025 d8f569b016f38178c385838a8b06b0c9 317 SUPERFAMILY SSF53067 6 313 1.68E-61 T 14-10-2018 AMBLS11_11025 d8f569b016f38178c385838a8b06b0c9 317 Gene3D G3DSA:3.30.420.40 6 308 1.5E-100 T 14-10-2018 AMBLS11_11025 d8f569b016f38178c385838a8b06b0c9 317 Hamap MF_00524 Glucokinase [glk]. 3 314 32.677 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMBLS11_11025 d8f569b016f38178c385838a8b06b0c9 317 Gene3D G3DSA:3.40.367.20 98 297 1.5E-100 T 14-10-2018 AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 SMART SM00052 1289 1533 4.4E-92 T 14-10-2018 IPR001633 EAL domain AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 SMART SM00267 1107 1279 4.9E-66 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Gene3D G3DSA:2.60.40.10 706 824 2.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 SUPERFAMILY SSF63829 361 656 3.43E-10 T 14-10-2018 AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 SUPERFAMILY SSF55073 1123 1281 1.41E-50 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Pfam PF07494 Two component regulator propeller 65 87 0.0048 T 14-10-2018 IPR011110 Two component regulator propeller AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Pfam PF07494 Two component regulator propeller 109 129 0.012 T 14-10-2018 IPR011110 Two component regulator propeller AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Pfam PF07494 Two component regulator propeller 394 416 0.0047 T 14-10-2018 IPR011110 Two component regulator propeller AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Pfam PF08447 PAS fold 891 975 5.3E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 SUPERFAMILY SSF141868 1294 1538 5.89E-81 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 SUPERFAMILY SSF50998 79 436 3.14E-11 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Gene3D G3DSA:3.30.450.20 856 980 3.5E-12 T 14-10-2018 AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1118 1275 3.9E-51 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1116 1277 1.3E-43 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Gene3D G3DSA:2.130.10.10 389 703 2.2E-46 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Gene3D G3DSA:2.130.10.10 49 100 7.2E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Gene3D G3DSA:2.130.10.10 101 388 9.4E-25 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Gene3D G3DSA:3.30.450.20 985 1110 2.2E-10 T 14-10-2018 AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Gene3D G3DSA:3.20.20.450 1293 1547 9.6E-85 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Pfam PF00563 EAL domain 1295 1528 2.4E-67 T 14-10-2018 IPR001633 EAL domain AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 SUPERFAMILY SSF55785 896 982 8.2E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 Gene3D G3DSA:3.30.70.270 1113 1292 3.0E-65 T 14-10-2018 AMBLS11_05460 a98aa1c6c8ef7e3ebd6e4f84ffe2ba38 1549 SUPERFAMILY SSF55785 1001 1114 4.71E-7 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_14470 49a6fbc714308f6f7b3f6c3159816dd8 376 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 10 374 2.2E-158 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AMBLS11_14470 49a6fbc714308f6f7b3f6c3159816dd8 376 Gene3D G3DSA:3.20.20.10 19 244 4.2E-153 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_14470 49a6fbc714308f6f7b3f6c3159816dd8 376 SUPERFAMILY SSF50621 212 365 1.49E-31 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMBLS11_14470 49a6fbc714308f6f7b3f6c3159816dd8 376 PIRSF PIRSF038941 2 376 1.2E-160 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AMBLS11_14470 49a6fbc714308f6f7b3f6c3159816dd8 376 Gene3D G3DSA:2.40.37.10 10 371 4.2E-153 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMBLS11_14470 49a6fbc714308f6f7b3f6c3159816dd8 376 SUPERFAMILY SSF51419 19 247 9.81E-43 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_14470 49a6fbc714308f6f7b3f6c3159816dd8 376 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 166 332 8.5E-9 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMBLS11_06360 f483f8ab65feed58825e1e2c9a18e295 158 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 148 6.9E-43 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMBLS11_06360 f483f8ab65feed58825e1e2c9a18e295 158 SMART SM00226 5 151 7.8E-54 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMBLS11_06360 f483f8ab65feed58825e1e2c9a18e295 158 SUPERFAMILY SSF52788 3 152 1.18E-51 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMBLS11_06360 f483f8ab65feed58825e1e2c9a18e295 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 82 97 1.5E-24 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMBLS11_06360 f483f8ab65feed58825e1e2c9a18e295 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 1.5E-24 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMBLS11_06360 f483f8ab65feed58825e1e2c9a18e295 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 1.5E-24 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMBLS11_06360 f483f8ab65feed58825e1e2c9a18e295 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 48 64 1.5E-24 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMBLS11_06360 f483f8ab65feed58825e1e2c9a18e295 158 Gene3D G3DSA:3.40.50.2300 5 158 1.1E-58 T 14-10-2018 AMBLS11_14085 1f4b0386b882a47ac066a0374549ee2e 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 147 1.0E-65 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMBLS11_14085 1f4b0386b882a47ac066a0374549ee2e 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 55.71 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMBLS11_14085 1f4b0386b882a47ac066a0374549ee2e 152 SUPERFAMILY SSF89447 1 135 5.02E-44 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily AMBLS11_14085 1f4b0386b882a47ac066a0374549ee2e 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 4.1E-55 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMBLS11_14085 1f4b0386b882a47ac066a0374549ee2e 152 Pfam PF02381 MraZ protein, putative antitoxin-like 78 134 5.9E-17 T 14-10-2018 IPR020603 MraZ domain AMBLS11_14085 1f4b0386b882a47ac066a0374549ee2e 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 1.7E-21 T 14-10-2018 IPR020603 MraZ domain AMBLS11_14085 1f4b0386b882a47ac066a0374549ee2e 152 Gene3D G3DSA:2.40.330.20 1 148 7.6E-42 T 14-10-2018 IPR038619 MraZ superfamily AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 Gene3D G3DSA:1.20.272.10 242 362 1.4E-39 T 14-10-2018 AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 Gene3D G3DSA:3.30.300.150 899 1012 4.6E-25 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 Gene3D G3DSA:3.40.50.300 13 177 1.4E-103 T 14-10-2018 AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.0E-46 T 14-10-2018 AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 Gene3D G3DSA:1.10.8.60 8 239 1.4E-103 T 14-10-2018 AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 SUPERFAMILY SSF48019 244 365 1.12E-26 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 SMART SM00382 37 179 2.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 905 1026 1.1E-24 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 SUPERFAMILY SSF52540 34 222 1.31E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 362 5.7E-28 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AMBLS11_12000 0f8f43e61f3324e6abb71027dcf247a9 1030 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 2.9E-136 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AMBLS11_01165 3410e21584f92a262f9b903fb6904608 536 Pfam PF07916 TraG-like protein, N-terminal region 23 497 2.6E-26 T 14-10-2018 IPR012931 TraG-like, N-terminal AMBLS11_08835 a1acf392c670699dade186cca0ac42d8 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 266 1.1E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_08835 a1acf392c670699dade186cca0ac42d8 270 Gene3D G3DSA:3.40.190.10 129 226 6.7E-22 T 14-10-2018 AMBLS11_08835 a1acf392c670699dade186cca0ac42d8 270 Gene3D G3DSA:3.40.190.10 48 265 6.7E-22 T 14-10-2018 AMBLS11_08835 a1acf392c670699dade186cca0ac42d8 270 SMART SM00062 41 270 0.0084 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_08835 a1acf392c670699dade186cca0ac42d8 270 SUPERFAMILY SSF53850 46 267 2.54E-30 T 14-10-2018 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 PIRSF PIRSF000148 3 374 1.9E-67 T 14-10-2018 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 SMART SM00859 5 125 8.3E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 SUPERFAMILY SSF55347 137 358 1.37E-76 T 14-10-2018 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 Gene3D G3DSA:3.30.360.10 142 354 4.1E-81 T 14-10-2018 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 Gene3D G3DSA:3.40.50.720 3 141 5.6E-59 T 14-10-2018 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 371 33.205 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 5 370 1.2E-191 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 147 357 4.2E-55 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 123 3.1E-25 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 265 279 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_06200 d4180ea95d5ce6a94b91f36094c99930 374 SUPERFAMILY SSF51735 4 150 3.75E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15215 647c3b93beba5d18d82f0fb282147590 305 Gene3D G3DSA:3.40.190.10 139 288 9.8E-6 T 14-10-2018 AMBLS11_15215 647c3b93beba5d18d82f0fb282147590 305 SUPERFAMILY SSF53850 33 288 2.28E-27 T 14-10-2018 AMBLS11_15215 647c3b93beba5d18d82f0fb282147590 305 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site AMBLS11_15215 647c3b93beba5d18d82f0fb282147590 305 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 88 8.1E-11 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_15215 647c3b93beba5d18d82f0fb282147590 305 Gene3D G3DSA:3.40.190.10 149 249 9.8E-6 T 14-10-2018 AMBLS11_15215 647c3b93beba5d18d82f0fb282147590 305 SMART SM00062 42 292 0.0012 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_15215 647c3b93beba5d18d82f0fb282147590 305 Gene3D G3DSA:3.40.190.10 29 98 5.0E-16 T 14-10-2018 AMBLS11_14945 130c89a3bbaf038c96342b48c69bb823 177 Gene3D G3DSA:1.10.1740.10 8 88 5.0E-27 T 14-10-2018 AMBLS11_14945 130c89a3bbaf038c96342b48c69bb823 177 Pfam PF04542 Sigma-70 region 2 24 90 2.2E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_14945 130c89a3bbaf038c96342b48c69bb823 177 Pfam PF08281 Sigma-70, region 4 120 171 4.0E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_14945 130c89a3bbaf038c96342b48c69bb823 177 SUPERFAMILY SSF88946 2 102 4.45E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_14945 130c89a3bbaf038c96342b48c69bb823 177 Gene3D G3DSA:1.10.10.10 89 177 7.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_14945 130c89a3bbaf038c96342b48c69bb823 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 175 7.1E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_14945 130c89a3bbaf038c96342b48c69bb823 177 SUPERFAMILY SSF88659 118 175 5.79E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 127 150 1.9E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 285 311 1.9E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 47 73 1.9E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 261 281 1.9E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 208 233 1.9E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 239 259 1.9E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 18 34 1.9E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 Gene3D G3DSA:1.10.220.30 101 206 1.4E-29 T 14-10-2018 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 Pfam PF01706 FliG C-terminal domain 231 337 1.0E-40 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 SUPERFAMILY SSF48029 14 129 1.27E-22 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 PIRSF PIRSF003161 12 346 3.8E-116 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 Pfam PF14841 FliG middle domain 129 200 1.1E-26 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 Gene3D G3DSA:1.10.220.30 208 346 3.0E-43 T 14-10-2018 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 Pfam PF14842 FliG N-terminal domain 17 118 8.2E-30 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 14 344 4.2E-100 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 Gene3D G3DSA:1.10.220.30 12 97 1.6E-19 T 14-10-2018 AMBLS11_04960 078bb753f30127d36fd36ebb0147036d 346 SUPERFAMILY SSF48029 127 338 2.22E-67 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMBLS11_00780 4bccfd10fdf71ec3fce6d2d28f35e6c0 306 Gene3D G3DSA:1.10.443.10 115 297 3.0E-56 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_00780 4bccfd10fdf71ec3fce6d2d28f35e6c0 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 303 54.796 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AMBLS11_00780 4bccfd10fdf71ec3fce6d2d28f35e6c0 306 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 17 305 4.3E-102 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 AMBLS11_00780 4bccfd10fdf71ec3fce6d2d28f35e6c0 306 SUPERFAMILY SSF56349 13 296 1.91E-54 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_00780 4bccfd10fdf71ec3fce6d2d28f35e6c0 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 93 1.8E-15 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMBLS11_00780 4bccfd10fdf71ec3fce6d2d28f35e6c0 306 Pfam PF00589 Phage integrase family 118 289 3.5E-45 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_00780 4bccfd10fdf71ec3fce6d2d28f35e6c0 306 Gene3D G3DSA:1.10.150.130 11 103 2.5E-16 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_13255 916f9e53ea60339c5dfd702f0a8dc7a3 264 Pfam PF17131 Outer membrane lipoprotein-sorting protein 79 262 1.3E-61 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AMBLS11_13255 916f9e53ea60339c5dfd702f0a8dc7a3 264 Gene3D G3DSA:2.50.20.10 27 262 1.3E-83 T 14-10-2018 AMBLS11_13550 85afd461650041795aaaccbee1499057 712 SUPERFAMILY SSF53300 337 500 2.23E-32 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMBLS11_13550 85afd461650041795aaaccbee1499057 712 TIGRFAM TIGR03788 marine_srt_targ: marine proteobacterial sortase target protein 66 707 2.0E-220 T 14-10-2018 IPR022440 Conserved hypothetical protein CHP03788 AMBLS11_13550 85afd461650041795aaaccbee1499057 712 Pfam PF08487 Vault protein inter-alpha-trypsin domain 64 174 1.1E-33 T 14-10-2018 IPR013694 VIT domain AMBLS11_13550 85afd461650041795aaaccbee1499057 712 Gene3D G3DSA:3.40.50.410 338 507 3.2E-37 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMBLS11_13550 85afd461650041795aaaccbee1499057 712 SMART SM00327 336 509 2.2E-21 T 14-10-2018 IPR002035 von Willebrand factor, type A AMBLS11_13550 85afd461650041795aaaccbee1499057 712 Pfam PF13768 von Willebrand factor type A domain 338 490 3.6E-24 T 14-10-2018 IPR002035 von Willebrand factor, type A AMBLS11_13550 85afd461650041795aaaccbee1499057 712 SMART SM00609 48 176 8.5E-9 T 14-10-2018 IPR013694 VIT domain AMBLS11_11845 05a0fb65a1a9980e54a977870079dd73 359 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 209 218 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMBLS11_11845 05a0fb65a1a9980e54a977870079dd73 359 Gene3D G3DSA:3.40.640.10 53 256 3.3E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_11845 05a0fb65a1a9980e54a977870079dd73 359 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 353 52.132 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMBLS11_11845 05a0fb65a1a9980e54a977870079dd73 359 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 351 6.5E-108 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMBLS11_11845 05a0fb65a1a9980e54a977870079dd73 359 SUPERFAMILY SSF53383 17 352 3.26E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_11845 05a0fb65a1a9980e54a977870079dd73 359 Gene3D G3DSA:3.90.1150.10 8 345 3.3E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_11845 05a0fb65a1a9980e54a977870079dd73 359 Pfam PF00155 Aminotransferase class I and II 47 347 1.6E-53 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 432 643 7.7E-28 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 Gene3D G3DSA:3.40.50.1700 417 646 2.7E-64 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 SUPERFAMILY SSF51445 51 431 3.79E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 Gene3D G3DSA:2.60.120.430 662 841 1.9E-13 T 14-10-2018 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 Gene3D G3DSA:3.20.20.300 53 412 8.4E-126 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 67 391 1.8E-78 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 SUPERFAMILY SSF52279 432 645 6.02E-42 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 PRINTS PR00133 Glycosyl hydrolase family 3 signature 244 260 1.1E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 PRINTS PR00133 Glycosyl hydrolase family 3 signature 133 149 1.1E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 PRINTS PR00133 Glycosyl hydrolase family 3 signature 314 332 1.1E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 1.1E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_18495 b5aac9777b66654e99cb97b3400570fb 841 PRINTS PR00133 Glycosyl hydrolase family 3 signature 157 176 1.1E-23 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_10320 dc2663a6cdc222e85aa5546de3e487f5 125 Pfam PF12487 Protein of unknown function (DUF3703) 10 117 5.2E-37 T 14-10-2018 IPR022172 Protein of unknown function DUF3703 AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 Pfam PF03448 MgtE intracellular N domain 36 137 1.5E-23 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 Gene3D G3DSA:3.10.580.10 135 262 5.4E-38 T 14-10-2018 AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 SMART SM00924 36 139 2.5E-34 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 Gene3D G3DSA:1.25.60.10 8 134 5.3E-19 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 SUPERFAMILY SSF54631 138 278 3.66E-31 T 14-10-2018 AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 14 451 4.0E-92 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 SUPERFAMILY SSF161093 280 451 1.02E-44 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 Gene3D G3DSA:1.10.357.20 277 452 3.8E-46 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 Pfam PF01769 Divalent cation transporter 326 444 1.9E-22 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 SUPERFAMILY SSF158791 11 136 6.02E-29 T 14-10-2018 AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 Pfam PF00571 CBS domain 203 257 5.0E-6 T 14-10-2018 IPR000644 CBS domain AMBLS11_03565 bba53ff33776320da2e30a0c52fc0165 452 Pfam PF00571 CBS domain 142 197 5.4E-5 T 14-10-2018 IPR000644 CBS domain AMBLS11_11190 0c58fc9fac368b6e116801594d917425 488 ProSitePatterns PS00502 Polygalacturonase active site. 333 347 - T 14-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 AMBLS11_11190 0c58fc9fac368b6e116801594d917425 488 SUPERFAMILY SSF51126 64 476 2.51E-82 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_11190 0c58fc9fac368b6e116801594d917425 488 Pfam PF00295 Glycosyl hydrolases family 28 235 469 5.9E-35 T 14-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 AMBLS11_11190 0c58fc9fac368b6e116801594d917425 488 SMART SM00710 244 269 9900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_11190 0c58fc9fac368b6e116801594d917425 488 SMART SM00710 419 440 3800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_11190 0c58fc9fac368b6e116801594d917425 488 SMART SM00710 326 347 22.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_11190 0c58fc9fac368b6e116801594d917425 488 SMART SM00710 292 313 1.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_11190 0c58fc9fac368b6e116801594d917425 488 SMART SM00710 353 376 10000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_11190 0c58fc9fac368b6e116801594d917425 488 Gene3D G3DSA:2.160.20.10 50 487 9.4E-131 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_06475 1dfab6f17b8c290d5d1d215f315425fb 298 Gene3D G3DSA:3.40.50.720 1 286 8.9E-69 T 14-10-2018 AMBLS11_06475 1dfab6f17b8c290d5d1d215f315425fb 298 SUPERFAMILY SSF51735 2 297 5.55E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_06475 1dfab6f17b8c290d5d1d215f315425fb 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 5.4E-107 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 AMBLS11_06475 1dfab6f17b8c290d5d1d215f315425fb 298 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 4.0E-19 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 AMBLS11_06475 1dfab6f17b8c290d5d1d215f315425fb 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 4.0E-15 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMBLS11_02175 256c91c2cd76ccfcdc0ba64aa1e7d73a 141 Pfam PF00581 Rhodanese-like domain 44 135 1.8E-19 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_02175 256c91c2cd76ccfcdc0ba64aa1e7d73a 141 SUPERFAMILY SSF52821 17 140 6.55E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_02175 256c91c2cd76ccfcdc0ba64aa1e7d73a 141 Gene3D G3DSA:3.40.250.10 22 141 7.8E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_02175 256c91c2cd76ccfcdc0ba64aa1e7d73a 141 SMART SM00450 40 138 1.8E-20 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_16090 e80e6a49bd8e884e0e30a06f1669d8d7 648 Gene3D G3DSA:3.40.50.12780 50 515 3.1E-108 T 14-10-2018 AMBLS11_16090 e80e6a49bd8e884e0e30a06f1669d8d7 648 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 51.81 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AMBLS11_16090 e80e6a49bd8e884e0e30a06f1669d8d7 648 Pfam PF00501 AMP-binding enzyme 84 522 7.4E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMBLS11_16090 e80e6a49bd8e884e0e30a06f1669d8d7 648 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.0E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMBLS11_16090 e80e6a49bd8e884e0e30a06f1669d8d7 648 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMBLS11_16090 e80e6a49bd8e884e0e30a06f1669d8d7 648 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 1.3E-302 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AMBLS11_16090 e80e6a49bd8e884e0e30a06f1669d8d7 648 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 4.1E-21 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AMBLS11_16090 e80e6a49bd8e884e0e30a06f1669d8d7 648 SUPERFAMILY SSF56801 15 643 5.63E-184 T 14-10-2018 AMBLS11_16090 e80e6a49bd8e884e0e30a06f1669d8d7 648 Gene3D G3DSA:3.30.300.30 518 647 5.5E-32 T 14-10-2018 AMBLS11_12005 2e8402113d557eae7552462230efd3b9 178 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 6 175 37.457 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AMBLS11_12005 2e8402113d557eae7552462230efd3b9 178 SUPERFAMILY SSF53271 6 175 1.75E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMBLS11_12005 2e8402113d557eae7552462230efd3b9 178 Gene3D G3DSA:3.40.50.2020 2 178 2.9E-64 T 14-10-2018 AMBLS11_12005 2e8402113d557eae7552462230efd3b9 178 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 6 174 1.4E-68 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AMBLS11_12005 2e8402113d557eae7552462230efd3b9 178 Pfam PF00156 Phosphoribosyl transferase domain 28 144 1.8E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMBLS11_05255 b424008d87f38f5a5668237f3faaf4e5 336 Gene3D G3DSA:3.90.850.10 1 335 8.6E-146 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMBLS11_05255 b424008d87f38f5a5668237f3faaf4e5 336 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 332 8.7E-42 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMBLS11_05255 b424008d87f38f5a5668237f3faaf4e5 336 SUPERFAMILY SSF56529 76 334 6.93E-60 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 Gene3D G3DSA:3.20.20.60 478 789 1.2E-103 T 14-10-2018 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 694 712 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 SUPERFAMILY SSF56059 2 384 4.59E-107 T 14-10-2018 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 Gene3D G3DSA:3.50.30.10 358 477 1.4E-40 T 14-10-2018 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 Gene3D G3DSA:3.30.470.20 194 357 6.4E-59 T 14-10-2018 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 Gene3D G3DSA:3.30.1490.20 1 193 2.1E-71 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 455 5.5E-27 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 SUPERFAMILY SSF52009 349 466 8.63E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 346 6.0E-118 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 SUPERFAMILY SSF51621 463 787 4.19E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 787 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 783 1.3E-60 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMBLS11_08300 4196d177ede3533d27840df80d04eb52 790 PIRSF PIRSF000854 1 790 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AMBLS11_03960 bf830f7fc2a200bb6ea61bc13c6b1692 430 Pfam PF12576 Protein of unknown function (DUF3754) 157 310 1.2E-36 T 14-10-2018 IPR022227 Protein of unknown function DUF3754 AMBLS11_13450 611be6aaf5b023b2ae7d841f76bb61f2 130 SUPERFAMILY SSF46785 9 128 3.73E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_13450 611be6aaf5b023b2ae7d841f76bb61f2 130 PIRSF PIRSF019455 2 130 1.1E-40 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMBLS11_13450 611be6aaf5b023b2ae7d841f76bb61f2 130 Gene3D G3DSA:1.10.10.10 9 75 1.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_13450 611be6aaf5b023b2ae7d841f76bb61f2 130 Pfam PF03965 Penicillinase repressor 10 123 1.1E-35 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMBLS11_13450 611be6aaf5b023b2ae7d841f76bb61f2 130 Gene3D G3DSA:1.10.4040.10 76 127 1.2E-12 T 14-10-2018 AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 10 351 4.7E-72 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 82 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 Pfam PF00083 Sugar (and other) transporter 412 518 3.8E-27 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 Pfam PF00083 Sugar (and other) transporter 12 345 4.5E-74 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 SUPERFAMILY SSF103473 10 517 1.02E-67 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 PRINTS PR00171 Sugar transporter signature 271 281 9.4E-16 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 PRINTS PR00171 Sugar transporter signature 19 29 9.4E-16 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 PRINTS PR00171 Sugar transporter signature 419 440 9.4E-16 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 PRINTS PR00171 Sugar transporter signature 442 454 9.4E-16 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AMBLS11_17535 09b14c873e9bb76d7b898edb962177a8 522 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 331 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMBLS11_09460 b7a22168b718a9fe733f344d2135f781 400 SUPERFAMILY SSF56349 178 392 8.83E-36 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_09460 b7a22168b718a9fe733f344d2135f781 400 SUPERFAMILY SSF47823 79 154 1.08E-11 T 14-10-2018 AMBLS11_09460 b7a22168b718a9fe733f344d2135f781 400 Pfam PF00589 Phage integrase family 184 384 4.8E-19 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_09460 b7a22168b718a9fe733f344d2135f781 400 Gene3D G3DSA:1.10.443.10 179 386 5.9E-39 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_09460 b7a22168b718a9fe733f344d2135f781 400 Gene3D G3DSA:1.10.150.130 65 167 7.6E-12 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_01035 ea153064b4cc00074c063ff2111acbe8 480 Pfam PF01523 Putative modulator of DNA gyrase 34 331 2.4E-66 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AMBLS11_01035 ea153064b4cc00074c063ff2111acbe8 480 Gene3D G3DSA:3.30.2290.10 15 219 5.9E-16 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AMBLS11_01035 ea153064b4cc00074c063ff2111acbe8 480 SUPERFAMILY SSF111283 20 479 5.62E-129 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AMBLS11_01035 ea153064b4cc00074c063ff2111acbe8 480 PIRSF PIRSF004919 15 480 9.3E-144 T 14-10-2018 IPR025502 TldD AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 SMART SM00729 147 367 2.4E-59 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 Gene3D G3DSA:3.80.30.20 145 377 6.1E-80 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.0E-202 T 14-10-2018 AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 SUPERFAMILY SSF102114 129 372 4.32E-61 T 14-10-2018 AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 Pfam PF01938 TRAM domain 379 440 2.7E-20 T 14-10-2018 IPR002792 TRAM domain AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 Gene3D G3DSA:3.40.50.12160 3 134 2.5E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 9.1E-153 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 Pfam PF04055 Radical SAM superfamily 151 325 1.1E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 74.027 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AMBLS11_06775 14b00881ecd8e99271bd8c087922f910 477 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.1E-30 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AMBLS11_09345 1ced6f32c44e56c60f06b1458d25bdf5 491 Pfam PF03553 Na+/H+ antiporter family 166 473 3.4E-57 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AMBLS11_09345 1ced6f32c44e56c60f06b1458d25bdf5 491 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 476 1.5E-134 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AMBLS11_00610 cb0d4a99fbcf8e0dc3006e2ccaf72c16 288 SUPERFAMILY SSF82689 177 277 4.97E-26 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMBLS11_00610 cb0d4a99fbcf8e0dc3006e2ccaf72c16 288 Gene3D G3DSA:3.30.70.100 175 270 3.9E-24 T 14-10-2018 AMBLS11_00610 cb0d4a99fbcf8e0dc3006e2ccaf72c16 288 SUPERFAMILY SSF50182 107 173 3.6E-18 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_00610 cb0d4a99fbcf8e0dc3006e2ccaf72c16 288 Gene3D G3DSA:2.30.30.60 123 172 2.4E-12 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_00610 cb0d4a99fbcf8e0dc3006e2ccaf72c16 288 Pfam PF00924 Mechanosensitive ion channel 65 264 1.7E-51 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_00610 cb0d4a99fbcf8e0dc3006e2ccaf72c16 288 SUPERFAMILY SSF82861 26 106 6.02E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMBLS11_13900 04b48fc5a521ffbd45663bea8db79e7b 236 PIRSF PIRSF029033 1 236 1.6E-95 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AMBLS11_13900 04b48fc5a521ffbd45663bea8db79e7b 236 Gene3D G3DSA:3.30.70.2970 50 166 1.7E-9 T 14-10-2018 AMBLS11_13900 04b48fc5a521ffbd45663bea8db79e7b 236 Gene3D G3DSA:3.30.110.170 40 208 1.7E-9 T 14-10-2018 AMBLS11_13900 04b48fc5a521ffbd45663bea8db79e7b 236 Pfam PF04402 Protein of unknown function (DUF541) 38 210 1.5E-16 T 14-10-2018 IPR007497 Protein of unknown function DUF541 AMBLS11_03320 26989544314d608180a5e1454b88446b 321 SUPERFAMILY SSF50249 206 310 2.28E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_03320 26989544314d608180a5e1454b88446b 321 Gene3D G3DSA:3.30.1490.70 183 231 2.4E-16 T 14-10-2018 AMBLS11_03320 26989544314d608180a5e1454b88446b 321 Gene3D G3DSA:3.30.470.30 57 182 5.3E-25 T 14-10-2018 AMBLS11_03320 26989544314d608180a5e1454b88446b 321 Pfam PF01068 ATP dependent DNA ligase domain 32 231 1.8E-8 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AMBLS11_03320 26989544314d608180a5e1454b88446b 321 Gene3D G3DSA:2.40.50.140 232 314 2.8E-8 T 14-10-2018 AMBLS11_03320 26989544314d608180a5e1454b88446b 321 Pfam PF14743 DNA ligase OB-like domain 245 310 5.9E-26 T 14-10-2018 IPR029319 DNA ligase, OB-like domain AMBLS11_03320 26989544314d608180a5e1454b88446b 321 SUPERFAMILY SSF56091 33 231 7.48E-34 T 14-10-2018 AMBLS11_16355 c8747b9622fe216143539e12a63fd9ec 118 Gene3D G3DSA:1.10.8.50 1 71 3.2E-25 T 14-10-2018 AMBLS11_16355 c8747b9622fe216143539e12a63fd9ec 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.329 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16355 c8747b9622fe216143539e12a63fd9ec 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.9E-30 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16355 c8747b9622fe216143539e12a63fd9ec 118 SUPERFAMILY SSF46946 2 114 7.46E-42 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMBLS11_16355 c8747b9622fe216143539e12a63fd9ec 118 Gene3D G3DSA:4.10.910.10 72 118 3.7E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16355 c8747b9622fe216143539e12a63fd9ec 118 PIRSF PIRSF002134 1 118 1.0E-38 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16355 c8747b9622fe216143539e12a63fd9ec 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16355 c8747b9622fe216143539e12a63fd9ec 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 6.9E-51 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 560 0.024 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 Gene3D G3DSA:3.90.480.20 15 418 3.1E-83 T 14-10-2018 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 SUPERFAMILY SSF55124 347 424 3.6E-22 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 479 495 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 9 572 59.094 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 PRINTS PR00397 Sirohaem Fe-binding site signature 431 449 6.0E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 PRINTS PR00397 Sirohaem Fe-binding site signature 479 497 6.0E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 354 418 8.5E-15 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 78 138 6.6E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 SUPERFAMILY SSF55124 13 144 4.42E-26 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 Gene3D G3DSA:3.30.413.10 428 569 1.8E-35 T 14-10-2018 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 18 560 3.8E-281 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 Gene3D G3DSA:3.30.413.10 140 349 3.1E-83 T 14-10-2018 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 172 330 2.7E-46 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 SUPERFAMILY SSF56014 429 563 5.63E-33 T 14-10-2018 AMBLS11_15570 d0e7311fb2387247ebe9cace2c5a353b 573 SUPERFAMILY SSF56014 148 345 3.4E-56 T 14-10-2018 AMBLS11_12690 b9b283952637e5e300075391264d9019 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12690 b9b283952637e5e300075391264d9019 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12690 b9b283952637e5e300075391264d9019 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12690 b9b283952637e5e300075391264d9019 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12690 b9b283952637e5e300075391264d9019 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 8.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12690 b9b283952637e5e300075391264d9019 276 SUPERFAMILY SSF51735 2 265 1.51E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_12690 b9b283952637e5e300075391264d9019 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12690 b9b283952637e5e300075391264d9019 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12690 b9b283952637e5e300075391264d9019 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12690 b9b283952637e5e300075391264d9019 276 Gene3D G3DSA:3.40.50.720 1 273 9.4E-71 T 14-10-2018 AMBLS11_12690 b9b283952637e5e300075391264d9019 276 Pfam PF00106 short chain dehydrogenase 3 199 7.2E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_17560 e8a0905cc2be71ca80fd1cdc3d402cb5 526 PIRSF PIRSF006446 338 516 6.1E-33 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMBLS11_17560 e8a0905cc2be71ca80fd1cdc3d402cb5 526 PIRSF PIRSF006446 1 332 6.2E-115 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMBLS11_17560 e8a0905cc2be71ca80fd1cdc3d402cb5 526 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 8.3E-177 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMBLS11_13070 d3bf0d9b323ca4eef1d4e79aba79f8eb 297 SUPERFAMILY SSF52151 23 284 1.12E-38 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMBLS11_13070 d3bf0d9b323ca4eef1d4e79aba79f8eb 297 Pfam PF01734 Patatin-like phospholipase 24 181 6.8E-25 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMBLS11_13070 d3bf0d9b323ca4eef1d4e79aba79f8eb 297 Gene3D G3DSA:3.40.1090.10 4 114 6.5E-22 T 14-10-2018 AMBLS11_13070 d3bf0d9b323ca4eef1d4e79aba79f8eb 297 Gene3D G3DSA:3.40.1090.10 115 284 2.0E-17 T 14-10-2018 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 SMART SM01274 79 259 1.4E-105 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 2 563 68.801 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 SUPERFAMILY SSF53223 5 268 3.88E-110 T 14-10-2018 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 Pfam PF03949 Malic enzyme, NAD binding domain 269 528 1.6E-100 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 SUPERFAMILY SSF51735 269 560 2.76E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 PRINTS PR00072 Malic enzyme signature 265 281 3.4E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 PRINTS PR00072 Malic enzyme signature 296 312 3.4E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 PRINTS PR00072 Malic enzyme signature 406 422 3.4E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 PRINTS PR00072 Malic enzyme signature 85 109 3.4E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 PRINTS PR00072 Malic enzyme signature 145 174 3.4E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 PRINTS PR00072 Malic enzyme signature 181 203 3.4E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 PRINTS PR00072 Malic enzyme signature 240 258 3.4E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 Gene3D G3DSA:3.40.50.10380 13 266 2.5E-114 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 Gene3D G3DSA:3.40.50.720 267 562 1.6E-106 T 14-10-2018 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 PIRSF PIRSF000106 1 561 1.2E-226 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 ProSitePatterns PS00331 Malic enzymes signature. 265 281 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 SMART SM00919 269 529 6.0E-126 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMBLS11_02045 3da20562da23125adfb0033c2c92f33a 563 Pfam PF00390 Malic enzyme, N-terminal domain 79 259 1.2E-77 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMBLS11_07070 92665cd0a735dfa7595ce6ff524ccdca 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 13 355 1.7E-119 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMBLS11_07070 92665cd0a735dfa7595ce6ff524ccdca 357 Gene3D G3DSA:3.10.180.10 2 154 1.5E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_07070 92665cd0a735dfa7595ce6ff524ccdca 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 276 3.3E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMBLS11_07070 92665cd0a735dfa7595ce6ff524ccdca 357 SUPERFAMILY SSF54593 5 342 2.02E-81 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_07070 92665cd0a735dfa7595ce6ff524ccdca 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 143 1.0E-66 T 14-10-2018 AMBLS11_07070 92665cd0a735dfa7595ce6ff524ccdca 357 Gene3D G3DSA:3.10.180.10 155 356 3.7E-69 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_07070 92665cd0a735dfa7595ce6ff524ccdca 357 PIRSF PIRSF009283 1 356 2.7E-111 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMBLS11_11205 f2eb42e29af1b21aac63bc823112e9d0 295 PIRSF PIRSF015558 1 284 1.5E-90 T 14-10-2018 IPR016634 WYL domain protein, s026 type AMBLS11_11205 f2eb42e29af1b21aac63bc823112e9d0 295 Pfam PF13280 WYL domain 119 198 2.0E-11 T 14-10-2018 IPR026881 WYL domain AMBLS11_00380 053ae2c8e045dbf3d574a7660660d3d6 715 Gene3D G3DSA:3.40.50.300 388 511 3.3E-9 T 14-10-2018 AMBLS11_00380 053ae2c8e045dbf3d574a7660660d3d6 715 Gene3D G3DSA:3.40.50.300 252 381 3.7E-15 T 14-10-2018 AMBLS11_00380 053ae2c8e045dbf3d574a7660660d3d6 715 Pfam PF13245 AAA domain 262 506 2.9E-15 T 14-10-2018 AMBLS11_00380 053ae2c8e045dbf3d574a7660660d3d6 715 SUPERFAMILY SSF52540 255 707 8.31E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00380 053ae2c8e045dbf3d574a7660660d3d6 715 Gene3D G3DSA:3.40.50.300 527 713 2.2E-32 T 14-10-2018 AMBLS11_00380 053ae2c8e045dbf3d574a7660660d3d6 715 Pfam PF13361 UvrD-like helicase C-terminal domain 631 704 3.2E-12 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMBLS11_03570 5b3ed4cc6143893acea8ce82584fa062 90 Gene3D G3DSA:3.30.1340.10 3 89 2.2E-29 T 14-10-2018 IPR035895 HPr-like superfamily AMBLS11_03570 5b3ed4cc6143893acea8ce82584fa062 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 83 3.5E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMBLS11_03570 5b3ed4cc6143893acea8ce82584fa062 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.3E-11 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMBLS11_03570 5b3ed4cc6143893acea8ce82584fa062 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 1.3E-11 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMBLS11_03570 5b3ed4cc6143893acea8ce82584fa062 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 1.3E-11 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMBLS11_03570 5b3ed4cc6143893acea8ce82584fa062 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMBLS11_03570 5b3ed4cc6143893acea8ce82584fa062 90 Pfam PF00381 PTS HPr component phosphorylation site 4 83 5.6E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMBLS11_03570 5b3ed4cc6143893acea8ce82584fa062 90 SUPERFAMILY SSF55594 4 89 4.71E-27 T 14-10-2018 IPR035895 HPr-like superfamily AMBLS11_08195 75a1d94defce9d31d4f8f5ae7d180fb3 495 Gene3D G3DSA:3.30.450.40 123 309 2.0E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_08195 75a1d94defce9d31d4f8f5ae7d180fb3 495 Gene3D G3DSA:3.30.70.270 310 494 5.8E-55 T 14-10-2018 AMBLS11_08195 75a1d94defce9d31d4f8f5ae7d180fb3 495 Pfam PF00990 Diguanylate cyclase, GGDEF domain 322 491 4.3E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_08195 75a1d94defce9d31d4f8f5ae7d180fb3 495 SUPERFAMILY SSF55781 153 297 3.05E-16 T 14-10-2018 AMBLS11_08195 75a1d94defce9d31d4f8f5ae7d180fb3 495 Pfam PF01590 GAF domain 153 294 8.4E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_08195 75a1d94defce9d31d4f8f5ae7d180fb3 495 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 492 3.0E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_08195 75a1d94defce9d31d4f8f5ae7d180fb3 495 SUPERFAMILY SSF55073 327 493 8.63E-43 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_08195 75a1d94defce9d31d4f8f5ae7d180fb3 495 SMART SM00267 311 494 1.2E-52 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_04820 0899a91bfd05ce88d6a424536ffaf83f 342 Gene3D G3DSA:3.90.550.10 1 233 2.5E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04820 0899a91bfd05ce88d6a424536ffaf83f 342 SUPERFAMILY SSF53448 2 207 2.56E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04820 0899a91bfd05ce88d6a424536ffaf83f 342 Pfam PF00535 Glycosyl transferase family 2 4 165 3.2E-21 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 453 33.044 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 Pfam PF01225 Mur ligase family, catalytic domain 26 93 4.5E-9 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 Gene3D G3DSA:3.40.1190.10 83 315 8.6E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 Gene3D G3DSA:3.40.1390.10 1 82 2.1E-22 T 14-10-2018 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 451 1.7E-136 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 SUPERFAMILY SSF53244 317 451 2.26E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 Pfam PF08245 Mur ligase middle domain 107 296 4.9E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 389 1.0E-13 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 Gene3D G3DSA:3.90.190.20 316 456 6.8E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 SUPERFAMILY SSF53623 103 312 1.27E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_14060 1bbb3f1358890e205cb3d67fedaac4d5 469 SUPERFAMILY SSF63418 1 96 1.7E-23 T 14-10-2018 IPR035911 MurE/MurF, N-terminal AMBLS11_07855 8c343e1cb14d760294d0b4bd9dc678cb 313 Pfam PF01479 S4 domain 21 67 8.6E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_07855 8c343e1cb14d760294d0b4bd9dc678cb 313 SUPERFAMILY SSF55120 95 311 2.56E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_07855 8c343e1cb14d760294d0b4bd9dc678cb 313 SMART SM00363 21 79 1.6E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_07855 8c343e1cb14d760294d0b4bd9dc678cb 313 Gene3D G3DSA:3.30.2350.10 93 313 2.0E-82 T 14-10-2018 AMBLS11_07855 8c343e1cb14d760294d0b4bd9dc678cb 313 SUPERFAMILY SSF55174 20 71 3.53E-8 T 14-10-2018 AMBLS11_07855 8c343e1cb14d760294d0b4bd9dc678cb 313 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_07855 8c343e1cb14d760294d0b4bd9dc678cb 313 Pfam PF00849 RNA pseudouridylate synthase 102 249 1.2E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_07855 8c343e1cb14d760294d0b4bd9dc678cb 313 Gene3D G3DSA:3.10.290.10 9 73 2.4E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMBLS11_07855 8c343e1cb14d760294d0b4bd9dc678cb 313 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 313 8.5E-91 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_12675 3241b3ee17973babdf307463dcb40e92 87 Gene3D G3DSA:1.20.58.110 1 87 5.2E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_12675 3241b3ee17973babdf307463dcb40e92 87 Pfam PF01649 Ribosomal protein S20 2 84 1.0E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_12675 3241b3ee17973babdf307463dcb40e92 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.1E-31 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_12675 3241b3ee17973babdf307463dcb40e92 87 SUPERFAMILY SSF46992 3 86 8.24E-33 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_12675 3241b3ee17973babdf307463dcb40e92 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 18.327 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_12675 3241b3ee17973babdf307463dcb40e92 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 4.0E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_03835 64e50f84fa9e64af6246e7d2e5009940 691 Pfam PF07676 WD40-like Beta Propeller Repeat 86 121 1.5E-9 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_03835 64e50f84fa9e64af6246e7d2e5009940 691 Pfam PF07676 WD40-like Beta Propeller Repeat 141 154 0.0055 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_03835 64e50f84fa9e64af6246e7d2e5009940 691 SUPERFAMILY SSF82171 41 411 8.63E-49 T 14-10-2018 AMBLS11_03835 64e50f84fa9e64af6246e7d2e5009940 691 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 201 288 1.2E-9 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AMBLS11_03835 64e50f84fa9e64af6246e7d2e5009940 691 Pfam PF00326 Prolyl oligopeptidase family 472 678 1.5E-45 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_03835 64e50f84fa9e64af6246e7d2e5009940 691 Gene3D G3DSA:2.120.10.30 27 185 8.1E-28 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_03835 64e50f84fa9e64af6246e7d2e5009940 691 Gene3D G3DSA:3.40.50.1820 385 680 1.8E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_03835 64e50f84fa9e64af6246e7d2e5009940 691 SUPERFAMILY SSF53474 426 678 5.21E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_03835 64e50f84fa9e64af6246e7d2e5009940 691 Gene3D G3DSA:2.140.10.30 189 290 1.3E-9 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AMBLS11_12420 c836bd694f52823b24573c1c16fb6ca4 461 Pfam PF03237 Terminase-like family 33 252 6.8E-6 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type AMBLS11_12420 c836bd694f52823b24573c1c16fb6ca4 461 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 279 417 1.6E-17 T 14-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit AMBLS11_12420 c836bd694f52823b24573c1c16fb6ca4 461 Pfam PF17289 Terminase RNaseH-like domain 267 417 1.7E-11 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like AMBLS11_12420 c836bd694f52823b24573c1c16fb6ca4 461 Gene3D G3DSA:3.40.50.300 27 237 5.4E-19 T 14-10-2018 AMBLS11_18865 3647d170ce458380d5446d709651f316 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 1.0E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_18865 3647d170ce458380d5446d709651f316 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 1.0E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_18865 3647d170ce458380d5446d709651f316 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 1.0E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_18865 3647d170ce458380d5446d709651f316 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 1.0E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_18865 3647d170ce458380d5446d709651f316 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 1.0E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_18865 3647d170ce458380d5446d709651f316 445 Pfam PF00232 Glycosyl hydrolase family 1 13 444 3.2E-140 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMBLS11_18865 3647d170ce458380d5446d709651f316 445 TIGRFAM TIGR03356 BGL: beta-galactosidase 14 437 6.0E-173 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 AMBLS11_18865 3647d170ce458380d5446d709651f316 445 Gene3D G3DSA:3.20.20.80 11 445 3.0E-151 T 14-10-2018 AMBLS11_18865 3647d170ce458380d5446d709651f316 445 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site AMBLS11_18865 3647d170ce458380d5446d709651f316 445 SUPERFAMILY SSF51445 14 442 2.9E-143 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_15205 30a3d5f777defdc719a4af4b0309fe5a 165 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 11 153 2.0E-37 T 14-10-2018 IPR030991 Cytochrome c-550 PedF AMBLS11_15205 30a3d5f777defdc719a4af4b0309fe5a 165 SUPERFAMILY SSF46626 7 151 4.87E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_15205 30a3d5f777defdc719a4af4b0309fe5a 165 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 70 149 6.8E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_15205 30a3d5f777defdc719a4af4b0309fe5a 165 Gene3D G3DSA:1.10.760.10 56 159 1.7E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Gene3D G3DSA:3.40.50.12740 920 1089 1.5E-35 T 14-10-2018 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Pfam PF00989 PAS fold 369 472 5.2E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Gene3D G3DSA:3.30.450.20 100 228 5.2E-36 T 14-10-2018 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 SMART SM00388 513 578 9.9E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Pfam PF00512 His Kinase A (phospho-acceptor) domain 514 578 2.8E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Gene3D G3DSA:3.30.565.10 577 743 3.9E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 SUPERFAMILY SSF52172 919 1046 3.56E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 SMART SM00387 625 743 9.4E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 SUPERFAMILY SSF55785 376 484 8.2E-11 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Gene3D G3DSA:1.10.287.130 478 576 1.7E-25 T 14-10-2018 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 369 480 2.8E-6 T 14-10-2018 IPR000014 PAS domain AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 SMART SM00448 921 1042 5.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 SUPERFAMILY SSF47384 499 579 1.71E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 SUPERFAMILY SSF55874 567 737 5.76E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 626 739 1.5E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Pfam PF02743 Cache domain 46 265 5.5E-17 T 14-10-2018 IPR033479 Double Cache domain 1 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 SUPERFAMILY SSF103190 63 227 4.45E-39 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 701 719 7.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 694 7.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 680 7.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 725 738 7.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Gene3D G3DSA:1.20.120.160 1136 1238 2.9E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 SUPERFAMILY SSF47226 1139 1236 2.21E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Gene3D G3DSA:3.30.450.20 364 477 4.2E-12 T 14-10-2018 AMBLS11_07690 b21a98eecdfb418e8926a397996cdb25 1239 Pfam PF00072 Response regulator receiver domain 924 1042 6.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 SUPERFAMILY SSF52777 273 502 6.23E-89 T 14-10-2018 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 Pfam PF02817 e3 binding domain 210 243 1.1E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 SUPERFAMILY SSF47005 204 248 6.54E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 Gene3D G3DSA:2.40.50.100 104 205 2.7E-21 T 14-10-2018 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 Gene3D G3DSA:2.40.50.100 1 102 3.3E-21 T 14-10-2018 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 134 163 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 SUPERFAMILY SSF51230 1 94 5.37E-25 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 Gene3D G3DSA:4.10.320.10 206 248 3.3E-20 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 272 501 1.1E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 111 503 9.4E-181 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 SUPERFAMILY SSF51230 110 201 1.57E-23 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 Pfam PF00364 Biotin-requiring enzyme 4 76 3.9E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 Pfam PF00364 Biotin-requiring enzyme 111 182 2.3E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 Gene3D G3DSA:3.30.559.10 271 503 1.1E-96 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMBLS11_08915 8cdbbafe48439fccec1447aa227ced20 503 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMBLS11_13280 e34a5872ef5362d45e447dcf795187ab 642 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 376 1.2E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_13280 e34a5872ef5362d45e447dcf795187ab 642 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 380 2.8E-37 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_13280 e34a5872ef5362d45e447dcf795187ab 642 Gene3D G3DSA:3.30.70.270 209 385 4.7E-48 T 14-10-2018 AMBLS11_13280 e34a5872ef5362d45e447dcf795187ab 642 Pfam PF00563 EAL domain 398 628 5.1E-71 T 14-10-2018 IPR001633 EAL domain AMBLS11_13280 e34a5872ef5362d45e447dcf795187ab 642 Gene3D G3DSA:3.20.20.450 390 641 2.0E-88 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_13280 e34a5872ef5362d45e447dcf795187ab 642 SMART SM00267 212 382 5.9E-47 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_13280 e34a5872ef5362d45e447dcf795187ab 642 SMART SM00052 392 633 1.3E-90 T 14-10-2018 IPR001633 EAL domain AMBLS11_13280 e34a5872ef5362d45e447dcf795187ab 642 SUPERFAMILY SSF141868 398 640 1.57E-81 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_13280 e34a5872ef5362d45e447dcf795187ab 642 SUPERFAMILY SSF55073 228 383 6.28E-42 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_11020 9d49b27487c063268850d44425cc75dc 214 Gene3D G3DSA:3.20.20.70 1 213 2.9E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_11020 9d49b27487c063268850d44425cc75dc 214 SUPERFAMILY SSF51569 6 210 1.26E-70 T 14-10-2018 AMBLS11_11020 9d49b27487c063268850d44425cc75dc 214 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 129 142 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMBLS11_11020 9d49b27487c063268850d44425cc75dc 214 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 41 50 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMBLS11_11020 9d49b27487c063268850d44425cc75dc 214 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 210 1.2E-81 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMBLS11_11020 9d49b27487c063268850d44425cc75dc 214 Pfam PF01081 KDPG and KHG aldolase 11 204 4.3E-81 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMBLS11_06345 70d319553c9abc250d86a4b7a147cd12 360 Gene3D G3DSA:3.40.50.150 116 309 8.1E-31 T 14-10-2018 AMBLS11_06345 70d319553c9abc250d86a4b7a147cd12 360 SUPERFAMILY SSF53335 115 295 1.96E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_06345 70d319553c9abc250d86a4b7a147cd12 360 Pfam PF08241 Methyltransferase domain 152 241 1.6E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMBLS11_04455 4965f9bb1fc412875920d33845cb4cce 335 SUPERFAMILY SSF53659 3 335 1.15E-126 T 14-10-2018 AMBLS11_04455 4965f9bb1fc412875920d33845cb4cce 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMBLS11_04455 4965f9bb1fc412875920d33845cb4cce 335 SMART SM01329 5 331 8.0E-183 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMBLS11_04455 4965f9bb1fc412875920d33845cb4cce 335 Gene3D G3DSA:3.40.718.10 1 335 4.8E-142 T 14-10-2018 AMBLS11_04455 4965f9bb1fc412875920d33845cb4cce 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 330 1.4E-109 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMBLS11_11800 45a6c2c8471fba85ad7d1a501975f220 434 Gene3D G3DSA:2.60.40.1180 363 433 4.8E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_11800 45a6c2c8471fba85ad7d1a501975f220 434 SMART SM00642 26 343 2.1E-19 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_11800 45a6c2c8471fba85ad7d1a501975f220 434 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 366 417 8.0E-5 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMBLS11_11800 45a6c2c8471fba85ad7d1a501975f220 434 SUPERFAMILY SSF51011 367 433 4.8E-8 T 14-10-2018 AMBLS11_11800 45a6c2c8471fba85ad7d1a501975f220 434 Gene3D G3DSA:3.20.20.80 13 349 1.1E-101 T 14-10-2018 AMBLS11_11800 45a6c2c8471fba85ad7d1a501975f220 434 SUPERFAMILY SSF51445 14 351 1.46E-80 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_11800 45a6c2c8471fba85ad7d1a501975f220 434 Pfam PF00128 Alpha amylase, catalytic domain 150 313 1.4E-13 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_11800 45a6c2c8471fba85ad7d1a501975f220 434 Pfam PF00128 Alpha amylase, catalytic domain 36 130 1.3E-18 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 Gene3D G3DSA:3.30.1360.10 16 226 2.4E-83 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 306 1.5E-23 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 SMART SM00662 22 232 4.1E-105 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 SUPERFAMILY SSF56553 52 176 1.57E-42 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 28 226 4.8E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 23 314 5.8E-112 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 Gene3D G3DSA:1.10.150.20 242 327 2.2E-38 T 14-10-2018 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 326 2.0E-35 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 SUPERFAMILY SSF47789 249 324 4.19E-25 T 14-10-2018 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 4 315 34.933 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 154 6.4E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 Gene3D G3DSA:2.170.120.12 52 175 2.4E-83 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16340 712acae5045706e35f2e0a4f073ea29a 328 SUPERFAMILY SSF55257 6 231 8.34E-31 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Pfam PF00360 Phytochrome region 356 516 6.8E-23 T 14-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Gene3D G3DSA:3.30.565.10 612 767 3.8E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Pfam PF00512 His Kinase A (phospho-acceptor) domain 544 609 2.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Pfam PF00072 Response regulator receiver domain 796 911 1.7E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Gene3D G3DSA:3.30.450.40 26 500 1.7E-118 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 656 765 3.2E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Pfam PF08446 PAS fold 27 141 3.1E-7 T 14-10-2018 IPR013654 PAS fold-2 GO:0006355 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Gene3D G3DSA:3.40.50.2300 783 918 3.4E-30 T 14-10-2018 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 707 1.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 751 764 1.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 711 721 1.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 PRINTS PR00344 Bacterial sensor protein C-terminal signature 726 744 1.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 SMART SM00387 656 767 2.5E-41 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 SMART SM00388 544 610 2.2E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Gene3D G3DSA:1.10.287.130 528 611 5.9E-20 T 14-10-2018 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 SUPERFAMILY SSF55785 14 142 1.78E-17 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 SUPERFAMILY SSF55781 172 343 1.5E-45 T 14-10-2018 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Pfam PF01590 GAF domain 175 331 8.0E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 SUPERFAMILY SSF55781 324 522 3.92E-29 T 14-10-2018 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Gene3D G3DSA:3.30.450.20 31 277 1.7E-118 T 14-10-2018 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 Gene3D G3DSA:3.30.450.270 345 515 1.7E-118 T 14-10-2018 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 SUPERFAMILY SSF47384 529 610 4.71E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 SMART SM00448 794 911 1.4E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 SUPERFAMILY SSF55874 599 769 9.3E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16525 f81979713ad8bcfef9854bf4a3c32a2e 920 SUPERFAMILY SSF52172 792 916 1.31E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_13485 23f27e0214e235bb85fc36a69d21b308 341 Gene3D G3DSA:3.30.390.50 223 326 4.3E-21 T 14-10-2018 AMBLS11_13485 23f27e0214e235bb85fc36a69d21b308 341 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 21 217 6.9E-41 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMBLS11_13485 23f27e0214e235bb85fc36a69d21b308 341 Gene3D G3DSA:3.30.465.10 1 220 4.6E-71 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMBLS11_13485 23f27e0214e235bb85fc36a69d21b308 341 SMART SM01092 225 323 3.0E-21 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMBLS11_13485 23f27e0214e235bb85fc36a69d21b308 341 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 226 322 6.1E-15 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMBLS11_13485 23f27e0214e235bb85fc36a69d21b308 341 SUPERFAMILY SSF56176 2 218 3.33E-52 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMBLS11_13485 23f27e0214e235bb85fc36a69d21b308 341 SUPERFAMILY SSF55447 225 323 4.32E-23 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMBLS11_12975 25f05999be034d3f1af6a86750ce0d2f 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 6.4E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC AMBLS11_12975 25f05999be034d3f1af6a86750ce0d2f 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 6.4E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC AMBLS11_12975 25f05999be034d3f1af6a86750ce0d2f 111 SMART SM01323 19 103 1.2E-38 T 14-10-2018 IPR003849 Preprotein translocase YajC AMBLS11_12975 25f05999be034d3f1af6a86750ce0d2f 111 Pfam PF02699 Preprotein translocase subunit 23 100 4.4E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC AMBLS11_12975 25f05999be034d3f1af6a86750ce0d2f 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 103 3.1E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC AMBLS11_08095 4437f6e1cf123996fc1425935c133338 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.461 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_08095 4437f6e1cf123996fc1425935c133338 89 Pfam PF00312 Ribosomal protein S15 9 88 1.1E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_08095 4437f6e1cf123996fc1425935c133338 89 Gene3D G3DSA:1.10.287.10 2 89 1.9E-35 T 14-10-2018 AMBLS11_08095 4437f6e1cf123996fc1425935c133338 89 SMART SM01387 8 88 7.3E-51 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_08095 4437f6e1cf123996fc1425935c133338 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_08095 4437f6e1cf123996fc1425935c133338 89 SUPERFAMILY SSF47060 3 89 6.18E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding AMBLS11_08095 4437f6e1cf123996fc1425935c133338 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.5E-38 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_08095 4437f6e1cf123996fc1425935c133338 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 6.0E-37 T 14-10-2018 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 Gene3D G3DSA:1.10.1440.20 606 665 2.8E-18 T 14-10-2018 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 Gene3D G3DSA:3.30.499.20 3 368 5.0E-161 T 14-10-2018 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 ProSitePatterns PS00450 Aconitase family signature 1. 442 458 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 ProSitePatterns PS01244 Aconitase family signature 2. 508 521 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 26 903 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 Gene3D G3DSA:3.30.499.10 369 605 9.2E-100 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 PRINTS PR00415 Aconitase family signature 198 211 1.1E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 PRINTS PR00415 Aconitase family signature 141 154 1.1E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 PRINTS PR00415 Aconitase family signature 508 521 1.1E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 PRINTS PR00415 Aconitase family signature 212 227 1.1E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 PRINTS PR00415 Aconitase family signature 274 287 1.1E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 PRINTS PR00415 Aconitase family signature 288 301 1.1E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 PRINTS PR00415 Aconitase family signature 446 457 1.1E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 PRINTS PR00415 Aconitase family signature 165 173 1.1E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 PRINTS PR00415 Aconitase family signature 368 382 1.1E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 SUPERFAMILY SSF52016 650 903 2.16E-80 T 14-10-2018 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 SUPERFAMILY SSF53732 5 641 3.66E-224 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 Gene3D G3DSA:3.20.19.10 668 904 1.5E-104 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 Pfam PF00330 Aconitase family (aconitate hydratase) 64 577 1.4E-182 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_01705 605ff8fbbc5aaa8251864b474b23753d 905 Pfam PF00694 Aconitase C-terminal domain 706 833 3.6E-48 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 198 255 1.8E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 SUPERFAMILY SSF55874 247 405 7.6E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 SMART SM00387 298 406 1.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 405 8.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 SMART SM00388 197 257 4.1E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 SUPERFAMILY SSF47384 181 255 1.43E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 Gene3D G3DSA:3.30.565.10 264 406 1.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 Gene3D G3DSA:1.10.287.130 187 253 2.6E-14 T 14-10-2018 AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 386 3.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 3.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 361 3.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04295 4eacc8df02a21df860077bdf06efa865 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 405 3.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11990 8ebc46c0abc5342689ad03227e67c631 134 Pfam PF13411 MerR HTH family regulatory protein 12 78 1.5E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_11990 8ebc46c0abc5342689ad03227e67c631 134 Gene3D G3DSA:1.10.1660.10 7 132 1.0E-29 T 14-10-2018 AMBLS11_11990 8ebc46c0abc5342689ad03227e67c631 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 14 36 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_11990 8ebc46c0abc5342689ad03227e67c631 134 SUPERFAMILY SSF46955 12 133 1.76E-30 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_11990 8ebc46c0abc5342689ad03227e67c631 134 SMART SM00422 12 80 1.3E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_11990 8ebc46c0abc5342689ad03227e67c631 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 12 23 3.8E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_11990 8ebc46c0abc5342689ad03227e67c631 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 23 36 3.8E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_11990 8ebc46c0abc5342689ad03227e67c631 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 3.8E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 Gene3D G3DSA:1.20.140.10 290 457 3.6E-40 T 14-10-2018 AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 452 3.2E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 592 2.1E-25 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 SUPERFAMILY SSF47203 288 464 1.16E-39 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 Gene3D G3DSA:1.10.540.10 17 158 2.2E-7 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 157 1.6E-4 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 2.0E-9 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 SUPERFAMILY SSF56645 36 294 1.31E-46 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 8.2E-16 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMBLS11_10410 dfa6bb5240e5d94beaabafb0e9c192fd 600 Gene3D G3DSA:2.40.110.10 160 289 1.6E-25 T 14-10-2018 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 Pfam PF13181 Tetratricopeptide repeat 38 68 0.0051 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 Pfam PF13181 Tetratricopeptide repeat 114 138 0.013 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 Pfam PF13181 Tetratricopeptide repeat 140 171 0.032 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 SMART SM00028 38 71 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 SMART SM00028 4 37 450.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 SMART SM00028 139 172 0.15 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 SMART SM00028 105 138 0.39 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 SUPERFAMILY SSF48452 9 237 4.55E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 SUPERFAMILY SSF52540 278 508 2.2E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 Gene3D G3DSA:3.40.50.300 265 520 1.2E-59 T 14-10-2018 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 Gene3D G3DSA:1.25.40.10 3 264 1.5E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02245 76043d3422c4ff438fcd15db78ac4113 522 Pfam PF13469 Sulfotransferase family 281 472 3.8E-38 T 14-10-2018 AMBLS11_15220 f34e67141598b82d44a0c003f9ba2918 477 SUPERFAMILY SSF53822 212 441 4.71E-15 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_06630 7e61761944fdcb3aeb10a94eb66b3ac0 356 Pfam PF10503 Esterase PHB depolymerase 246 341 3.0E-6 T 14-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AMBLS11_06630 7e61761944fdcb3aeb10a94eb66b3ac0 356 Gene3D G3DSA:3.40.50.1820 223 351 2.2E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_06630 7e61761944fdcb3aeb10a94eb66b3ac0 356 Gene3D G3DSA:3.40.50.1820 32 168 9.8E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_06630 7e61761944fdcb3aeb10a94eb66b3ac0 356 SUPERFAMILY SSF53474 41 342 3.65E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_00185 f4e88b8017f0ad0c7378cbaf2f193fce 495 SUPERFAMILY SSF56672 43 254 6.67E-37 T 14-10-2018 AMBLS11_00185 f4e88b8017f0ad0c7378cbaf2f193fce 495 Gene3D G3DSA:1.10.150.20 195 246 1.5E-7 T 14-10-2018 AMBLS11_00185 f4e88b8017f0ad0c7378cbaf2f193fce 495 Pfam PF00817 impB/mucB/samB family 41 106 1.9E-5 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMBLS11_00185 f4e88b8017f0ad0c7378cbaf2f193fce 495 Gene3D G3DSA:3.30.70.270 91 247 1.5E-7 T 14-10-2018 AMBLS11_00185 f4e88b8017f0ad0c7378cbaf2f193fce 495 Gene3D G3DSA:2.30.40.20 49 90 1.5E-7 T 14-10-2018 AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 SUPERFAMILY SSF141072 564 658 1.05E-13 T 14-10-2018 IPR038081 CalX-like domain superfamily AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 Pfam PF03160 Calx-beta domain 652 753 1.3E-15 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 Pfam PF03160 Calx-beta domain 554 637 0.0017 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 Gene3D G3DSA:2.60.40.2030 545 662 4.9E-12 T 14-10-2018 IPR038081 CalX-like domain superfamily AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 SUPERFAMILY SSF141072 663 777 9.68E-21 T 14-10-2018 IPR038081 CalX-like domain superfamily AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 Gene3D G3DSA:2.60.40.10 793 866 1.0E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 SUPERFAMILY SSF49299 777 867 4.71E-5 T 14-10-2018 IPR035986 PKD domain superfamily AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 TIGRFAM TIGR04312 choice_anch_B: choice-of-anchor B domain 159 546 8.9E-136 T 14-10-2018 IPR027589 Choice-of-anchor B domain AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 SMART SM00237 539 638 0.072 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 SMART SM00237 652 754 2.8E-17 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 Gene3D G3DSA:2.60.40.2030 663 792 4.2E-20 T 14-10-2018 IPR038081 CalX-like domain superfamily AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 Pfam PF08309 LVIVD repeat 475 508 2.2E-4 T 14-10-2018 IPR013211 LVIVD AMBLS11_04110 cfb6e7c003514024e8d971cd07fe43d9 919 Pfam PF08309 LVIVD repeat 205 231 1.1 T 14-10-2018 IPR013211 LVIVD AMBLS11_08090 69e5828530914e8ea61dedfb1ff07503 324 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 244 5.5E-19 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AMBLS11_08090 69e5828530914e8ea61dedfb1ff07503 324 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.8E-56 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AMBLS11_08090 69e5828530914e8ea61dedfb1ff07503 324 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 320 17.895 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_08090 69e5828530914e8ea61dedfb1ff07503 324 Gene3D G3DSA:3.30.2350.10 1 245 2.1E-88 T 14-10-2018 AMBLS11_08090 69e5828530914e8ea61dedfb1ff07503 324 SUPERFAMILY SSF55120 9 244 4.03E-77 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_08090 69e5828530914e8ea61dedfb1ff07503 324 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 248 297 5.7E-5 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_08090 69e5828530914e8ea61dedfb1ff07503 324 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.8E-80 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 Gene3D G3DSA:1.20.1640.10 541 1030 4.1E-254 T 14-10-2018 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 SUPERFAMILY SSF82714 725 809 4.97E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 SUPERFAMILY SSF82866 809 1039 1.19E-50 T 14-10-2018 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 Gene3D G3DSA:3.30.70.1320 178 365 4.1E-254 T 14-10-2018 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 Gene3D G3DSA:3.30.2090.10 221 307 4.1E-254 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 Gene3D G3DSA:3.30.2090.10 723 812 4.1E-254 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 Pfam PF00873 AcrB/AcrD/AcrF family 48 1033 2.3E-184 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 SUPERFAMILY SSF82714 225 302 7.46E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 SUPERFAMILY SSF82693 178 347 4.24E-12 T 14-10-2018 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 SUPERFAMILY SSF82866 328 526 5.1E-35 T 14-10-2018 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 PRINTS PR00702 Acriflavin resistance protein family signature 396 417 6.2E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 PRINTS PR00702 Acriflavin resistance protein family signature 499 522 6.2E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 PRINTS PR00702 Acriflavin resistance protein family signature 82 100 6.2E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 PRINTS PR00702 Acriflavin resistance protein family signature 568 585 6.2E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 PRINTS PR00702 Acriflavin resistance protein family signature 369 392 6.2E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 PRINTS PR00702 Acriflavin resistance protein family signature 424 448 6.2E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 PRINTS PR00702 Acriflavin resistance protein family signature 54 78 6.2E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 Gene3D G3DSA:3.30.70.1430 84 820 4.1E-254 T 14-10-2018 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 Gene3D G3DSA:3.30.70.1430 588 673 4.1E-254 T 14-10-2018 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 Gene3D G3DSA:3.30.70.1440 674 870 4.1E-254 T 14-10-2018 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 Gene3D G3DSA:1.20.1640.10 54 540 4.1E-254 T 14-10-2018 AMBLS11_10535 0dc9a09f29ca7f3b23c36d1b47c34012 1059 SUPERFAMILY SSF82693 84 178 2.62E-20 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Gene3D G3DSA:1.20.120.330 306 461 9.9E-51 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Gene3D G3DSA:1.20.120.330 842 974 1.2E-36 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Pfam PF08335 GlnD PII-uridylyltransferase 318 456 1.7E-40 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Pfam PF08335 GlnD PII-uridylyltransferase 856 951 2.6E-9 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 41 294 3.5E-79 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 577 831 1.6E-80 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 SUPERFAMILY SSF81593 308 457 6.91E-39 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 SUPERFAMILY SSF81301 551 839 2.06E-79 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Gene3D G3DSA:3.30.460.10 134 305 7.6E-62 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Gene3D G3DSA:3.30.460.100 587 840 1.2E-81 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Gene3D G3DSA:1.20.120.1510 472 586 1.3E-26 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 SUPERFAMILY SSF81593 844 973 7.53E-28 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Gene3D G3DSA:1.10.4050.10 11 131 9.7E-10 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 SUPERFAMILY SSF81301 40 307 2.75E-75 T 14-10-2018 AMBLS11_13225 9e6b6d5a22b6ada1a7ca50b430ac5a18 977 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 38 974 18.033 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AMBLS11_15775 e129dd83db1a8bc8e9154a201dda9b36 736 Gene3D G3DSA:3.40.50.1820 486 736 2.6E-76 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_15775 e129dd83db1a8bc8e9154a201dda9b36 736 Gene3D G3DSA:2.140.10.30 20 476 1.7E-165 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AMBLS11_15775 e129dd83db1a8bc8e9154a201dda9b36 736 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 126 445 9.8E-99 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AMBLS11_15775 e129dd83db1a8bc8e9154a201dda9b36 736 SUPERFAMILY SSF53474 482 736 2.13E-74 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_15775 e129dd83db1a8bc8e9154a201dda9b36 736 SUPERFAMILY SSF82171 19 466 1.83E-68 T 14-10-2018 AMBLS11_15775 e129dd83db1a8bc8e9154a201dda9b36 736 Pfam PF00326 Prolyl oligopeptidase family 541 736 4.5E-54 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_09055 77ab308998e2752f5707db9ae6878112 291 Gene3D G3DSA:1.10.1040.10 170 291 1.5E-37 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMBLS11_09055 77ab308998e2752f5707db9ae6878112 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 288 5.1E-34 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMBLS11_09055 77ab308998e2752f5707db9ae6878112 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 164 1.1E-48 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMBLS11_09055 77ab308998e2752f5707db9ae6878112 291 SUPERFAMILY SSF51735 4 167 2.35E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_09055 77ab308998e2752f5707db9ae6878112 291 SUPERFAMILY SSF48179 169 290 4.19E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_09055 77ab308998e2752f5707db9ae6878112 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMBLS11_09055 77ab308998e2752f5707db9ae6878112 291 Gene3D G3DSA:3.40.50.720 1 169 2.7E-48 T 14-10-2018 AMBLS11_09055 77ab308998e2752f5707db9ae6878112 291 PIRSF PIRSF000103 1 291 1.9E-65 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMBLS11_00955 54ca2e06447d7d6ab98cc660661d58be 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 3.7E-143 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AMBLS11_00955 54ca2e06447d7d6ab98cc660661d58be 338 SUPERFAMILY SSF51735 1 336 8.98E-104 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_00955 54ca2e06447d7d6ab98cc660661d58be 338 Gene3D G3DSA:3.40.50.720 3 273 4.2E-145 T 14-10-2018 AMBLS11_00955 54ca2e06447d7d6ab98cc660661d58be 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 4.3E-9 T 14-10-2018 AMBLS11_00955 54ca2e06447d7d6ab98cc660661d58be 338 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 4.3E-9 T 14-10-2018 AMBLS11_00955 54ca2e06447d7d6ab98cc660661d58be 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 4.3E-9 T 14-10-2018 AMBLS11_00955 54ca2e06447d7d6ab98cc660661d58be 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 4.3E-9 T 14-10-2018 AMBLS11_00955 54ca2e06447d7d6ab98cc660661d58be 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 8.5E-59 T 14-10-2018 IPR016040 NAD(P)-binding domain AMBLS11_00955 54ca2e06447d7d6ab98cc660661d58be 338 Gene3D G3DSA:3.90.25.10 193 328 4.2E-145 T 14-10-2018 AMBLS11_05030 c9460b03379bdd88cc900f02f4d70963 535 SUPERFAMILY SSF141523 298 459 8.76E-21 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMBLS11_05030 c9460b03379bdd88cc900f02f4d70963 535 Pfam PF03734 L,D-transpeptidase catalytic domain 299 466 3.4E-27 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMBLS11_05030 c9460b03379bdd88cc900f02f4d70963 535 SUPERFAMILY SSF47090 207 274 2.59E-12 T 14-10-2018 IPR036365 PGBD-like superfamily AMBLS11_05030 c9460b03379bdd88cc900f02f4d70963 535 Pfam PF01471 Putative peptidoglycan binding domain 229 271 3.7E-8 T 14-10-2018 IPR002477 Peptidoglycan binding-like AMBLS11_04475 58ec2b3dc0db3a4b5169dbe61797e05a 518 Gene3D G3DSA:3.30.70.270 348 515 3.6E-53 T 14-10-2018 AMBLS11_04475 58ec2b3dc0db3a4b5169dbe61797e05a 518 SMART SM00267 342 513 2.8E-49 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_04475 58ec2b3dc0db3a4b5169dbe61797e05a 518 Pfam PF00990 Diguanylate cyclase, GGDEF domain 354 508 3.2E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_04475 58ec2b3dc0db3a4b5169dbe61797e05a 518 SUPERFAMILY SSF55073 358 511 3.22E-45 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_04475 58ec2b3dc0db3a4b5169dbe61797e05a 518 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 511 2.6E-46 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 114 200 18.756 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 106 8.0E-18 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 SUPERFAMILY SSF141734 9 120 7.45E-45 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 117 200 1.6E-29 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 107 2.7E-31 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 Gene3D G3DSA:3.10.20.400 3 98 1.2E-34 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 Gene3D G3DSA:1.10.287.1080 114 205 4.5E-29 T 14-10-2018 AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 118 203 9.7E-16 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 SUPERFAMILY SSF101386 116 205 6.73E-25 T 14-10-2018 AMBLS11_11870 7330e5ec23d749e777da3aea9357d0a8 205 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 9 205 36.893 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 Gene3D G3DSA:3.40.190.80 154 263 3.8E-33 T 14-10-2018 AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 Gene3D G3DSA:3.30.540.10 4 153 4.9E-48 T 14-10-2018 AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 8 263 39.357 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 SUPERFAMILY SSF56655 5 250 3.01E-67 T 14-10-2018 AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 Pfam PF00459 Inositol monophosphatase family 14 245 3.2E-48 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 9 262 6.8E-87 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 9.3E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 9.3E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_05790 dbe6c20aafa222b7400f5d963363ea42 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 9.3E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_09835 3afb6ea538c3a865eb2cb835d7492122 935 SUPERFAMILY SSF46785 867 932 2.18E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_09835 3afb6ea538c3a865eb2cb835d7492122 935 Gene3D G3DSA:3.40.50.300 546 848 3.4E-123 T 14-10-2018 AMBLS11_09835 3afb6ea538c3a865eb2cb835d7492122 935 Pfam PF01580 FtsK/SpoIIIE family 549 762 7.9E-71 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMBLS11_09835 3afb6ea538c3a865eb2cb835d7492122 935 Gene3D G3DSA:1.10.10.10 871 934 5.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_09835 3afb6ea538c3a865eb2cb835d7492122 935 Gene3D G3DSA:3.30.980.40 441 545 5.3E-34 T 14-10-2018 AMBLS11_09835 3afb6ea538c3a865eb2cb835d7492122 935 SUPERFAMILY SSF52540 522 833 9.18E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09835 3afb6ea538c3a865eb2cb835d7492122 935 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 9 179 1.5E-37 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region AMBLS11_09835 3afb6ea538c3a865eb2cb835d7492122 935 Pfam PF09397 Ftsk gamma domain 869 929 7.2E-26 T 14-10-2018 IPR018541 FtsK gamma domain AMBLS11_09835 3afb6ea538c3a865eb2cb835d7492122 935 SMART SM00843 867 932 6.3E-39 T 14-10-2018 IPR018541 FtsK gamma domain AMBLS11_13780 2bde08b1892737370c90b3a42819d8aa 908 Gene3D G3DSA:2.170.130.10 34 172 9.2E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_13780 2bde08b1892737370c90b3a42819d8aa 908 Pfam PF00593 TonB dependent receptor 409 907 2.8E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_13780 2bde08b1892737370c90b3a42819d8aa 908 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 891 908 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site AMBLS11_13780 2bde08b1892737370c90b3a42819d8aa 908 SUPERFAMILY SSF56935 28 908 1.68E-94 T 14-10-2018 AMBLS11_13780 2bde08b1892737370c90b3a42819d8aa 908 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 41 908 8.1E-193 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_13780 2bde08b1892737370c90b3a42819d8aa 908 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 167 1.2E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_04185 2042debc696e37a15743d33db13cf97c 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 6 193 3.2E-64 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AMBLS11_04185 2042debc696e37a15743d33db13cf97c 200 Pfam PF01725 Ham1 family 7 192 2.0E-57 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AMBLS11_04185 2042debc696e37a15743d33db13cf97c 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 5 197 49.171 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 AMBLS11_04185 2042debc696e37a15743d33db13cf97c 200 Gene3D G3DSA:3.90.950.10 1 198 7.1E-77 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMBLS11_04185 2042debc696e37a15743d33db13cf97c 200 SUPERFAMILY SSF52972 5 195 1.18E-71 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMBLS11_13945 f08b5b82f353ddbc1f5dc6664666f2f2 181 Gene3D G3DSA:3.40.80.10 2 178 1.9E-55 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMBLS11_13945 f08b5b82f353ddbc1f5dc6664666f2f2 181 SMART SM00644 12 163 5.8E-48 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMBLS11_13945 f08b5b82f353ddbc1f5dc6664666f2f2 181 SUPERFAMILY SSF55846 5 177 3.8E-63 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMBLS11_13945 f08b5b82f353ddbc1f5dc6664666f2f2 181 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 23 163 1.8E-24 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMBLS11_05545 3e1a95a88cd76aec417e3f2dbbb17b6c 188 Gene3D G3DSA:1.20.120.160 4 116 2.9E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_05545 3e1a95a88cd76aec417e3f2dbbb17b6c 188 Pfam PF01627 Hpt domain 27 106 5.2E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_05545 3e1a95a88cd76aec417e3f2dbbb17b6c 188 SUPERFAMILY SSF47226 4 113 1.18E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 Gene3D G3DSA:3.30.565.10 319 466 1.7E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 Gene3D G3DSA:1.10.287.130 203 312 5.8E-16 T 14-10-2018 AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 SMART SM00388 253 311 2.9E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 464 3.6E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 SMART SM00387 355 466 1.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 SUPERFAMILY SSF55874 300 464 3.8E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 4.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 4.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 SMART SM00304 198 252 3.4E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_14420 6745133395d7467378965c3ce7ffc470 466 SUPERFAMILY SSF47384 237 310 3.73E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_07130 fd37335551d438d7cb90799aa8c94175 91 Gene3D G3DSA:3.30.70.100 1 88 2.2E-20 T 14-10-2018 AMBLS11_07130 fd37335551d438d7cb90799aa8c94175 91 SUPERFAMILY SSF54909 1 84 1.07E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMBLS11_07130 fd37335551d438d7cb90799aa8c94175 91 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 74 2.4E-12 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 334 1.9E-62 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 Gene3D G3DSA:3.50.50.100 1 411 3.7E-113 T 14-10-2018 AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 SUPERFAMILY SSF51905 3 338 1.3E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-5 T 14-10-2018 AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.1E-5 T 14-10-2018 AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.1E-5 T 14-10-2018 AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.2E-12 T 14-10-2018 AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.2E-12 T 14-10-2018 AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.2E-12 T 14-10-2018 AMBLS11_17720 d80a29ce1005e82036615f5357fa12d0 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.2E-12 T 14-10-2018 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 15 462 5.2E-109 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 Pfam PF10396 GTP-binding protein TrmE N-terminus 10 124 1.2E-35 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 Gene3D G3DSA:1.20.120.430 126 462 5.7E-106 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 Pfam PF01926 50S ribosome-binding GTPase 222 340 3.3E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 9 462 32.901 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 Gene3D G3DSA:3.40.50.300 221 390 5.7E-106 T 14-10-2018 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 Pfam PF12631 MnmE helical domain 127 459 3.2E-61 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 SUPERFAMILY SSF52540 76 381 8.23E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 PRINTS PR00449 Transforming protein P21 ras signature 330 343 1.3E-5 T 14-10-2018 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 PRINTS PR00449 Transforming protein P21 ras signature 362 384 1.3E-5 T 14-10-2018 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 PRINTS PR00449 Transforming protein P21 ras signature 221 242 1.3E-5 T 14-10-2018 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 SUPERFAMILY SSF116878 125 462 2.48E-50 T 14-10-2018 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 Gene3D G3DSA:3.30.1360.120 1 125 3.1E-39 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMBLS11_19005 d392a6be6e1f328b1ff1a9409acc6b48 462 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 376 2.5E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_05145 e04cd8b73482ff00fd13f06e040d8f34 807 SUPERFAMILY SSF56935 33 807 2.66E-75 T 14-10-2018 AMBLS11_05145 e04cd8b73482ff00fd13f06e040d8f34 807 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 790 807 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site AMBLS11_05145 e04cd8b73482ff00fd13f06e040d8f34 807 Gene3D G3DSA:2.170.130.10 48 171 2.2E-12 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_05145 e04cd8b73482ff00fd13f06e040d8f34 807 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 150 6.3E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_05145 e04cd8b73482ff00fd13f06e040d8f34 807 Pfam PF00593 TonB dependent receptor 417 805 4.6E-32 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_17555 99968c88f03458c3d95928fbb15e1209 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.1E-103 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMBLS11_17555 99968c88f03458c3d95928fbb15e1209 378 PIRSF PIRSF000267 2 378 4.3E-124 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMBLS11_17555 99968c88f03458c3d95928fbb15e1209 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 375 1.6E-158 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMBLS11_06830 6358a2342dd01d11c8439bcf3614b446 218 SUPERFAMILY SSF51182 2 128 7.59E-34 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_06830 6358a2342dd01d11c8439bcf3614b446 218 Gene3D G3DSA:2.60.120.10 1 215 1.1E-76 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_06830 6358a2342dd01d11c8439bcf3614b446 218 SUPERFAMILY SSF51182 118 216 6.82E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_06830 6358a2342dd01d11c8439bcf3614b446 218 Pfam PF12973 ChrR Cupin-like domain 126 211 6.1E-32 T 14-10-2018 IPR025979 ChrR-like cupin domain AMBLS11_06830 6358a2342dd01d11c8439bcf3614b446 218 Pfam PF12973 ChrR Cupin-like domain 18 108 1.7E-38 T 14-10-2018 IPR025979 ChrR-like cupin domain AMBLS11_09310 40ae385c04cb1873da7d0261b1329966 373 Gene3D G3DSA:3.90.1150.10 10 369 2.5E-145 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_09310 40ae385c04cb1873da7d0261b1329966 373 Pfam PF00266 Aminotransferase class-V 17 355 6.3E-38 T 14-10-2018 IPR000192 Aminotransferase class V domain AMBLS11_09310 40ae385c04cb1873da7d0261b1329966 373 PIRSF PIRSF000524 5 373 7.6E-113 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AMBLS11_09310 40ae385c04cb1873da7d0261b1329966 373 SUPERFAMILY SSF53383 11 373 4.54E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_09310 40ae385c04cb1873da7d0261b1329966 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 210 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMBLS11_09310 40ae385c04cb1873da7d0261b1329966 373 Gene3D G3DSA:3.40.640.10 23 271 2.5E-145 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_01065 650c57e12dc9000f77125e8909f8958c 235 SMART SM00448 4 114 8.2E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01065 650c57e12dc9000f77125e8909f8958c 235 SUPERFAMILY SSF46894 132 230 5.1E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_01065 650c57e12dc9000f77125e8909f8958c 235 Pfam PF00072 Response regulator receiver domain 6 113 9.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01065 650c57e12dc9000f77125e8909f8958c 235 SMART SM00862 153 229 2.2E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_01065 650c57e12dc9000f77125e8909f8958c 235 Gene3D G3DSA:1.10.10.10 123 233 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_01065 650c57e12dc9000f77125e8909f8958c 235 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-32 T 14-10-2018 AMBLS11_01065 650c57e12dc9000f77125e8909f8958c 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 2.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_01065 650c57e12dc9000f77125e8909f8958c 235 SUPERFAMILY SSF52172 2 124 1.31E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_18430 70f9d08586d0297bc4779e6254af0cf8 493 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 13 278 3.1E-73 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AMBLS11_18430 70f9d08586d0297bc4779e6254af0cf8 493 SUPERFAMILY SSF103473 15 475 6.19E-29 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_18430 70f9d08586d0297bc4779e6254af0cf8 493 Gene3D G3DSA:1.20.1250.20 233 478 2.1E-11 T 14-10-2018 AMBLS11_18430 70f9d08586d0297bc4779e6254af0cf8 493 Gene3D G3DSA:1.20.1250.20 14 210 5.1E-12 T 14-10-2018 AMBLS11_18430 70f9d08586d0297bc4779e6254af0cf8 493 Pfam PF13347 MFS/sugar transport protein 304 473 8.5E-30 T 14-10-2018 AMBLS11_18430 70f9d08586d0297bc4779e6254af0cf8 493 Pfam PF13347 MFS/sugar transport protein 15 264 4.5E-56 T 14-10-2018 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 Gene3D G3DSA:1.10.390.10 279 442 4.1E-64 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 552 865 3.8E-102 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 Gene3D G3DSA:1.25.50.10 550 865 8.0E-101 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 4.8E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.8E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.8E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.8E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.8E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 545 1.2E-17 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 Gene3D G3DSA:2.60.40.1730 13 193 1.7E-68 T 14-10-2018 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 Gene3D G3DSA:1.10.1740.60 194 278 8.0E-38 T 14-10-2018 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 SUPERFAMILY SSF63737 4 192 3.27E-44 T 14-10-2018 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 10 864 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 Gene3D G3DSA:2.60.40.1840 443 545 4.2E-17 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 SUPERFAMILY SSF55486 203 450 2.2E-74 T 14-10-2018 AMBLS11_09350 001f6c37d15e40ebb8ba84b90034ebb8 869 Pfam PF01433 Peptidase family M1 domain 207 437 3.1E-61 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_13520 111533b9997038a621c720424d663911 184 SUPERFAMILY SSF52317 9 182 1.38E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_13520 111533b9997038a621c720424d663911 184 Gene3D G3DSA:3.40.50.880 1 184 1.9E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_13520 111533b9997038a621c720424d663911 184 Pfam PF01965 DJ-1/PfpI family 10 180 2.2E-44 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMBLS11_13520 111533b9997038a621c720424d663911 184 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 11 182 2.1E-48 T 14-10-2018 IPR006286 Deglycase PfpI AMBLS11_07525 f1a838309851bce0e147b6085e19f954 171 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 168 4.0E-53 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMBLS11_07525 f1a838309851bce0e147b6085e19f954 171 Gene3D G3DSA:1.20.1200.10 17 171 2.6E-52 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMBLS11_07525 f1a838309851bce0e147b6085e19f954 171 SUPERFAMILY SSF89028 1 169 1.29E-54 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMBLS11_07525 f1a838309851bce0e147b6085e19f954 171 Pfam PF01923 Cobalamin adenosyltransferase 3 160 6.0E-54 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMBLS11_07525 f1a838309851bce0e147b6085e19f954 171 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 169 1.0E-21 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 7.5E-54 T 14-10-2018 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 7.5E-54 T 14-10-2018 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 7.5E-54 T 14-10-2018 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 PRINTS PR00173 Glutamate-aspartate symporter signature 228 247 7.5E-54 T 14-10-2018 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 7.5E-54 T 14-10-2018 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 7.5E-54 T 14-10-2018 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 7.5E-54 T 14-10-2018 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 7.5E-54 T 14-10-2018 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 7.5E-54 T 14-10-2018 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 Gene3D G3DSA:1.10.3860.10 3 415 5.6E-117 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 SUPERFAMILY SSF118215 13 401 5.89E-109 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMBLS11_07030 0243545f79579989d825b9e9049a960a 419 Pfam PF00375 Sodium:dicarboxylate symporter family 13 401 1.3E-117 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SUPERFAMILY SSF52172 779 901 1.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Gene3D G3DSA:1.10.287.130 512 597 2.6E-25 T 14-10-2018 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SUPERFAMILY SSF55874 588 759 1.57E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Gene3D G3DSA:3.30.450.20 396 511 8.0E-22 T 14-10-2018 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Gene3D G3DSA:1.20.120.160 921 1039 1.0E-8 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SMART SM00086 472 514 2.9E-6 T 14-10-2018 IPR001610 PAC motif AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SMART SM00388 534 599 1.1E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Pfam PF13426 PAS domain 281 380 5.5E-9 T 14-10-2018 IPR000014 PAS domain AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Gene3D G3DSA:3.40.50.2300 773 899 4.5E-37 T 14-10-2018 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Pfam PF01627 Hpt domain 948 1025 3.0E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Gene3D G3DSA:3.30.450.20 267 389 5.7E-26 T 14-10-2018 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SMART SM00091 270 336 5.9E-9 T 14-10-2018 IPR000014 PAS domain AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SMART SM00091 398 470 0.019 T 14-10-2018 IPR000014 PAS domain AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Pfam PF00072 Response regulator receiver domain 781 895 7.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 647 756 2.3E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Gene3D G3DSA:3.30.565.10 598 761 2.3E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SMART SM00387 646 757 4.4E-41 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SUPERFAMILY SSF55785 281 395 2.84E-21 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Pfam PF03707 Bacterial signalling protein N terminal repeat 129 177 2.5E-10 T 14-10-2018 IPR005330 MHYT domain AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Pfam PF03707 Bacterial signalling protein N terminal repeat 66 122 1.6E-16 T 14-10-2018 IPR005330 MHYT domain AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Pfam PF03707 Bacterial signalling protein N terminal repeat 199 248 7.2E-8 T 14-10-2018 IPR005330 MHYT domain AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Pfam PF00512 His Kinase A (phospho-acceptor) domain 535 599 3.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 393 1.1E-21 T 14-10-2018 IPR000014 PAS domain AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 521 6.0E-13 T 14-10-2018 IPR000014 PAS domain AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 710 4.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 754 4.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 696 4.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 717 735 4.2E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 Pfam PF08447 PAS fold 423 507 1.9E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SUPERFAMILY SSF47384 518 600 2.75E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SUPERFAMILY SSF47226 878 1023 3.14E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SMART SM00448 779 895 6.4E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_08060 46bb3681ffc6073d9f9220a284364790 1111 SUPERFAMILY SSF55785 385 512 1.94E-18 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_04200 153689b9071998cdb6afcddc6e824221 393 Pfam PF01743 Poly A polymerase head domain 3 122 1.5E-19 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMBLS11_04200 153689b9071998cdb6afcddc6e824221 393 SUPERFAMILY SSF81301 1 119 2.18E-30 T 14-10-2018 AMBLS11_04200 153689b9071998cdb6afcddc6e824221 393 SUPERFAMILY SSF81891 120 387 1.18E-43 T 14-10-2018 AMBLS11_04200 153689b9071998cdb6afcddc6e824221 393 Hamap MF_01262 CCA-adding enzyme [cca]. 1 388 40.135 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AMBLS11_04200 153689b9071998cdb6afcddc6e824221 393 PIRSF PIRSF000813 1 393 6.3E-136 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AMBLS11_04200 153689b9071998cdb6afcddc6e824221 393 Gene3D G3DSA:1.10.3090.10 122 392 1.4E-45 T 14-10-2018 AMBLS11_04200 153689b9071998cdb6afcddc6e824221 393 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 2.0E-9 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMBLS11_04200 153689b9071998cdb6afcddc6e824221 393 Gene3D G3DSA:3.30.460.10 1 121 9.2E-30 T 14-10-2018 AMBLS11_02025 050a721930291c16f43d781d01d17275 202 PIRSF PIRSF016482 4 202 4.2E-57 T 14-10-2018 IPR007445 Pilus assembly protein, PilO AMBLS11_02025 050a721930291c16f43d781d01d17275 202 Gene3D G3DSA:3.30.70.60 99 201 3.0E-35 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMBLS11_02025 050a721930291c16f43d781d01d17275 202 Pfam PF04350 Pilus assembly protein, PilO 57 192 2.0E-51 T 14-10-2018 IPR007445 Pilus assembly protein, PilO AMBLS11_02025 050a721930291c16f43d781d01d17275 202 Gene3D G3DSA:1.10.287.540 62 98 2.9E-7 T 14-10-2018 AMBLS11_08125 c9a0876b6d2fa97cb85cb0f781072a20 561 Gene3D G3DSA:3.40.50.2300 9 141 4.6E-15 T 14-10-2018 AMBLS11_08125 c9a0876b6d2fa97cb85cb0f781072a20 561 SMART SM00448 14 130 5.5E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_08125 c9a0876b6d2fa97cb85cb0f781072a20 561 Gene3D G3DSA:1.25.40.10 142 360 1.8E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_08125 c9a0876b6d2fa97cb85cb0f781072a20 561 Pfam PF00072 Response regulator receiver domain 16 130 3.3E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_08125 c9a0876b6d2fa97cb85cb0f781072a20 561 SUPERFAMILY SSF48452 173 283 3.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_08125 c9a0876b6d2fa97cb85cb0f781072a20 561 SUPERFAMILY SSF52172 13 147 3.37E-17 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_15190 9b45c4ef0b5cb5620b36e3d0cc1a0158 372 Gene3D G3DSA:3.40.50.1480 9 366 2.0E-102 T 14-10-2018 AMBLS11_15190 9b45c4ef0b5cb5620b36e3d0cc1a0158 372 SMART SM00996 4 369 5.5E-11 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMBLS11_15190 9b45c4ef0b5cb5620b36e3d0cc1a0158 372 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 19 130 3.3E-11 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMBLS11_15190 9b45c4ef0b5cb5620b36e3d0cc1a0158 372 Gene3D G3DSA:3.40.50.720 172 329 2.0E-102 T 14-10-2018 AMBLS11_15190 9b45c4ef0b5cb5620b36e3d0cc1a0158 372 SUPERFAMILY SSF51735 170 329 2.9E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15190 9b45c4ef0b5cb5620b36e3d0cc1a0158 372 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 184 327 2.4E-36 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMBLS11_15190 9b45c4ef0b5cb5620b36e3d0cc1a0158 372 SMART SM00997 170 329 3.0E-63 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMBLS11_15190 9b45c4ef0b5cb5620b36e3d0cc1a0158 372 SUPERFAMILY SSF52283 7 366 3.83E-25 T 14-10-2018 AMBLS11_11010 774e874c8870aebc3dfab8d3dafa6308 283 PIRSF PIRSF016020 1 283 7.8E-47 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AMBLS11_11010 774e874c8870aebc3dfab8d3dafa6308 283 SUPERFAMILY SSF74650 7 280 1.19E-57 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMBLS11_11010 774e874c8870aebc3dfab8d3dafa6308 283 Pfam PF01263 Aldose 1-epimerase 22 280 2.7E-32 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMBLS11_11010 774e874c8870aebc3dfab8d3dafa6308 283 Gene3D G3DSA:2.70.98.10 3 282 9.9E-71 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 Gene3D G3DSA:3.90.640.10 301 312 4.3E-22 T 14-10-2018 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 Pfam PF00012 Hsp70 protein 377 497 5.0E-5 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 Pfam PF00012 Hsp70 protein 179 310 3.6E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 SUPERFAMILY SSF53067 258 497 9.36E-26 T 14-10-2018 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 SUPERFAMILY SSF53067 3 252 6.48E-22 T 14-10-2018 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 Gene3D G3DSA:3.30.420.40 127 255 4.3E-22 T 14-10-2018 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 Gene3D G3DSA:3.30.420.40 435 482 2.0E-10 T 14-10-2018 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 Gene3D G3DSA:3.30.420.40 483 494 2.0E-10 T 14-10-2018 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 Gene3D G3DSA:3.90.640.10 377 434 2.0E-10 T 14-10-2018 AMBLS11_00880 5eca13c3e28eadb6b7370457d59e685f 500 Gene3D G3DSA:3.30.420.40 256 300 4.3E-22 T 14-10-2018 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 SUPERFAMILY SSF46894 137 209 2.86E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 Gene3D G3DSA:3.40.50.12740 2 209 5.4E-46 T 14-10-2018 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 Pfam PF00072 Response regulator receiver domain 5 115 1.4E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 SMART SM00421 147 204 1.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 SUPERFAMILY SSF52172 1 130 3.7E-23 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 SMART SM00448 2 115 1.1E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.2E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.2E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.2E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16085 1e113766f58c1465047f52a1c8aa31cb 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_07875 cc549d32bc9d67ca486043d197e309fa 56 SUPERFAMILY SSF57829 2 54 1.4E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMBLS11_07875 cc549d32bc9d67ca486043d197e309fa 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 8.7E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07875 cc549d32bc9d67ca486043d197e309fa 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.639 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07875 cc549d32bc9d67ca486043d197e309fa 56 Pfam PF01783 Ribosomal L32p protein family 2 55 9.7E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16685 19605714eaacd9067a494e5cf9ae338e 156 Pfam PF06961 Protein of unknown function (DUF1294) 76 130 1.2E-22 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 AMBLS11_17890 a511ea95f2367d1d238843eadee1650f 1054 Pfam PF07660 Secretin and TonB N terminus short domain 83 132 9.5E-7 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AMBLS11_17890 a511ea95f2367d1d238843eadee1650f 1054 Pfam PF07715 TonB-dependent Receptor Plug Domain 189 291 2.7E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_17890 a511ea95f2367d1d238843eadee1650f 1054 SMART SM00965 82 133 4.0E-8 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AMBLS11_17890 a511ea95f2367d1d238843eadee1650f 1054 Gene3D G3DSA:3.55.50.30 54 154 1.1E-17 T 14-10-2018 AMBLS11_17890 a511ea95f2367d1d238843eadee1650f 1054 SUPERFAMILY SSF56935 165 1054 5.27E-70 T 14-10-2018 AMBLS11_17890 a511ea95f2367d1d238843eadee1650f 1054 Gene3D G3DSA:2.170.130.10 158 295 1.4E-15 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_17890 a511ea95f2367d1d238843eadee1650f 1054 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 171 1053 3.1E-180 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_17890 a511ea95f2367d1d238843eadee1650f 1054 Pfam PF00593 TonB dependent receptor 583 1052 5.3E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_17890 a511ea95f2367d1d238843eadee1650f 1054 Gene3D G3DSA:2.40.170.20 576 1054 3.8E-31 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_09890 f76e39536b0239bd331627672fa607cb 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 49.894 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AMBLS11_09890 f76e39536b0239bd331627672fa607cb 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMBLS11_09890 f76e39536b0239bd331627672fa607cb 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 5.7E-152 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AMBLS11_09890 f76e39536b0239bd331627672fa607cb 361 Gene3D G3DSA:3.40.640.10 16 258 1.5E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_09890 f76e39536b0239bd331627672fa607cb 361 Pfam PF00266 Aminotransferase class-V 4 348 2.1E-55 T 14-10-2018 IPR000192 Aminotransferase class V domain AMBLS11_09890 f76e39536b0239bd331627672fa607cb 361 Gene3D G3DSA:3.90.1150.10 259 361 2.0E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_09890 f76e39536b0239bd331627672fa607cb 361 PIRSF PIRSF000525 1 361 5.6E-147 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AMBLS11_09890 f76e39536b0239bd331627672fa607cb 361 SUPERFAMILY SSF53383 1 358 2.81E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_10555 2797e048adfe27337154d4aa20f5faaa 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 81 177 1.0E-29 T 14-10-2018 AMBLS11_10555 2797e048adfe27337154d4aa20f5faaa 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 4 196 42.345 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AMBLS11_10555 2797e048adfe27337154d4aa20f5faaa 199 Gene3D G3DSA:1.10.3210.10 2 199 8.1E-85 T 14-10-2018 AMBLS11_10555 2797e048adfe27337154d4aa20f5faaa 199 Pfam PF13023 HD domain 12 167 2.8E-19 T 14-10-2018 IPR006674 HD domain AMBLS11_10555 2797e048adfe27337154d4aa20f5faaa 199 SUPERFAMILY SSF109604 5 186 3.71E-48 T 14-10-2018 AMBLS11_10555 2797e048adfe27337154d4aa20f5faaa 199 SMART SM00471 27 152 2.2E-7 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_05535 3a49eb883244301aa2c88593967991f9 313 SUPERFAMILY SSF51735 3 158 1.31E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_05535 3a49eb883244301aa2c88593967991f9 313 SUPERFAMILY SSF48179 189 311 5.1E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_05535 3a49eb883244301aa2c88593967991f9 313 Gene3D G3DSA:3.40.50.720 3 187 2.6E-32 T 14-10-2018 AMBLS11_05535 3a49eb883244301aa2c88593967991f9 313 Gene3D G3DSA:1.10.1040.10 189 312 6.0E-40 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMBLS11_05535 3a49eb883244301aa2c88593967991f9 313 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 149 3.5E-19 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain AMBLS11_05535 3a49eb883244301aa2c88593967991f9 313 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 189 311 3.0E-34 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain AMBLS11_05535 3a49eb883244301aa2c88593967991f9 313 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 311 8.9E-61 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 Pfam PF00764 Arginosuccinate synthase 8 395 3.5E-150 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 396 1.5E-141 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 Gene3D G3DSA:3.90.1260.10 66 355 1.1E-147 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 Gene3D G3DSA:1.20.5.470 366 402 3.0E-8 T 14-10-2018 AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 SUPERFAMILY SSF52402 5 169 3.09E-48 T 14-10-2018 AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 SUPERFAMILY SSF69864 175 400 5.36E-86 T 14-10-2018 AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 Gene3D G3DSA:3.40.50.620 7 175 1.1E-147 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 400 51.741 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMBLS11_02095 b04d8ad9b0c24333b4b93ac257d24220 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 429 8.5E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 SMART SM00091 143 209 2.9E-8 T 14-10-2018 IPR000014 PAS domain AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 Pfam PF00563 EAL domain 451 684 1.4E-71 T 14-10-2018 IPR001633 EAL domain AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 SUPERFAMILY SSF141868 452 694 1.14E-81 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 SUPERFAMILY SSF55785 131 260 1.28E-16 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 SMART SM00267 263 434 3.9E-54 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 Gene3D G3DSA:3.30.450.20 151 260 1.8E-21 T 14-10-2018 AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 SMART SM00448 6 117 3.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 Gene3D G3DSA:3.20.20.450 447 699 2.4E-90 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 271 431 5.8E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 Gene3D G3DSA:3.30.70.270 267 446 9.3E-55 T 14-10-2018 AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 SUPERFAMILY SSF55073 278 436 8.63E-45 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 SUPERFAMILY SSF52172 6 160 4.41E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 Pfam PF00072 Response regulator receiver domain 8 113 1.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 Pfam PF00989 PAS fold 149 259 9.1E-14 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 265 2.0E-11 T 14-10-2018 IPR000014 PAS domain AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 SMART SM00052 444 689 7.8E-99 T 14-10-2018 IPR001633 EAL domain AMBLS11_07205 4eb8933ca6ab02cc419d3cb74248fe17 701 Gene3D G3DSA:3.40.50.2300 1 135 2.6E-31 T 14-10-2018 AMBLS11_08890 f3877151d7771d2850af9fb6b9874e30 124 SUPERFAMILY SSF81343 2 124 3.43E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08890 f3877151d7771d2850af9fb6b9874e30 124 Gene3D G3DSA:1.20.1300.10 1 124 6.4E-41 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08890 f3877151d7771d2850af9fb6b9874e30 124 PIRSF PIRSF000178 1 124 9.0E-30 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08890 f3877151d7771d2850af9fb6b9874e30 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08890 f3877151d7771d2850af9fb6b9874e30 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 119 5.5E-30 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08890 f3877151d7771d2850af9fb6b9874e30 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08890 f3877151d7771d2850af9fb6b9874e30 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 121 2.7E-40 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 ProSitePatterns PS00438 Catalase proximal active site signature. 53 69 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 SUPERFAMILY SSF56634 13 488 4.06E-194 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 Gene3D G3DSA:2.40.180.10 12 491 1.2E-206 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 Pfam PF00199 Catalase 17 394 4.5E-176 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 Pfam PF06628 Catalase-related immune-responsive 428 488 8.5E-19 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 PRINTS PR00067 Catalase signature 93 111 2.5E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 PRINTS PR00067 Catalase signature 30 53 2.5E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 PRINTS PR00067 Catalase signature 295 322 2.5E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 PRINTS PR00067 Catalase signature 133 151 2.5E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 PRINTS PR00067 Catalase signature 114 131 2.5E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 PRINTS PR00067 Catalase signature 327 353 2.5E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 PIRSF PIRSF038928 7 491 5.4E-203 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_02065 df33392a343f73853c5b734c69be7ac9 491 SMART SM01060 17 400 2.3E-249 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_13960 be291d111fff55ee5aba6f01ada5d531 140 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_13960 be291d111fff55ee5aba6f01ada5d531 140 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 6.0E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_13960 be291d111fff55ee5aba6f01ada5d531 140 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 32 1.4E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_13960 be291d111fff55ee5aba6f01ada5d531 140 Gene3D G3DSA:3.30.700.10 12 138 9.9E-32 T 14-10-2018 AMBLS11_13960 be291d111fff55ee5aba6f01ada5d531 140 Pfam PF00114 Pilin (bacterial filament) 41 132 3.9E-6 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AMBLS11_13960 be291d111fff55ee5aba6f01ada5d531 140 SUPERFAMILY SSF54523 12 133 5.23E-26 T 14-10-2018 AMBLS11_10465 a5ce5a1efdecd0c98e84481b0bad657a 132 SUPERFAMILY SSF81273 88 131 7.06E-10 T 14-10-2018 AMBLS11_10465 a5ce5a1efdecd0c98e84481b0bad657a 132 Gene3D G3DSA:4.10.430.10 88 132 8.5E-18 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AMBLS11_10465 a5ce5a1efdecd0c98e84481b0bad657a 132 Pfam PF00816 H-NS histone family 33 125 7.1E-16 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMBLS11_10465 a5ce5a1efdecd0c98e84481b0bad657a 132 SMART SM00528 84 131 2.1E-13 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AMBLS11_10465 a5ce5a1efdecd0c98e84481b0bad657a 132 PIRSF PIRSF002096 1 131 1.0E-41 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AMBLS11_10465 a5ce5a1efdecd0c98e84481b0bad657a 132 Gene3D G3DSA:1.10.287.1050 1 81 3.2E-15 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AMBLS11_10465 a5ce5a1efdecd0c98e84481b0bad657a 132 SUPERFAMILY SSF81273 2 58 2.75E-12 T 14-10-2018 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 288 3.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 SMART SM00387 328 438 3.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 SMART SM00304 176 228 2.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 Gene3D G3DSA:1.10.287.130 173 284 3.0E-24 T 14-10-2018 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 SMART SM00388 229 289 5.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 5.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 5.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 5.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 5.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 SUPERFAMILY SSF47384 213 289 5.3E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 Gene3D G3DSA:3.30.565.10 291 439 4.1E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 435 1.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 Pfam PF00672 HAMP domain 176 219 7.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_18195 e4a0b7e22626c34a1833245b6c99e6d0 444 SUPERFAMILY SSF55874 279 436 1.96E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_09295 8bbc2091fc97c8002c752db86e7495cb 626 SUPERFAMILY SSF56112 44 309 1.5E-32 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_09295 8bbc2091fc97c8002c752db86e7495cb 626 Gene3D G3DSA:1.10.510.10 43 382 3.7E-22 T 14-10-2018 AMBLS11_09295 8bbc2091fc97c8002c752db86e7495cb 626 SMART SM00220 45 312 6.3E-7 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMBLS11_09295 8bbc2091fc97c8002c752db86e7495cb 626 Pfam PF00069 Protein kinase domain 45 266 3.4E-15 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMBLS11_09295 8bbc2091fc97c8002c752db86e7495cb 626 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 51 73 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 143 306 1.8E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 SMART SM00052 318 564 7.8E-86 T 14-10-2018 IPR001633 EAL domain AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 Gene3D G3DSA:3.30.450.20 31 145 2.5E-13 T 14-10-2018 AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 SUPERFAMILY SSF55785 37 145 1.45E-14 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 Gene3D G3DSA:3.30.70.270 146 321 3.7E-59 T 14-10-2018 AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 Gene3D G3DSA:3.20.20.450 322 572 3.4E-86 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 Pfam PF08447 PAS fold 43 121 8.4E-8 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 304 1.4E-48 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 SUPERFAMILY SSF141868 325 571 2.09E-78 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 SUPERFAMILY SSF55073 152 309 4.47E-47 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 SMART SM00267 136 308 3.2E-61 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 37 143 4.4E-9 T 14-10-2018 IPR000014 PAS domain AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 SMART SM00091 21 88 6.0E-4 T 14-10-2018 IPR000014 PAS domain AMBLS11_07090 24b684f3c733ef0224603fbc9d4279bb 572 Pfam PF00563 EAL domain 326 559 1.6E-64 T 14-10-2018 IPR001633 EAL domain AMBLS11_08385 588ea19632b28b5018188a9a0571b61a 240 SUPERFAMILY SSF55729 72 232 1.59E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_08385 588ea19632b28b5018188a9a0571b61a 240 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 100 223 7.3E-34 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AMBLS11_08385 588ea19632b28b5018188a9a0571b61a 240 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 10 79 1.0E-18 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AMBLS11_08385 588ea19632b28b5018188a9a0571b61a 240 PIRSF PIRSF037208 1 239 6.0E-84 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AMBLS11_08385 588ea19632b28b5018188a9a0571b61a 240 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 1 230 34.594 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AMBLS11_01800 a58d080ba55d2f84c20da6e5779d9ead 729 SUPERFAMILY SSF55486 55 720 1.47E-173 T 14-10-2018 AMBLS11_01800 a58d080ba55d2f84c20da6e5779d9ead 729 Pfam PF01432 Peptidase family M3 270 719 2.4E-102 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AMBLS11_01800 a58d080ba55d2f84c20da6e5779d9ead 729 Gene3D G3DSA:1.10.1370.10 188 651 3.0E-208 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMBLS11_01800 a58d080ba55d2f84c20da6e5779d9ead 729 Gene3D G3DSA:1.10.1370.40 62 718 3.0E-208 T 14-10-2018 AMBLS11_02230 75d81b2271e14581e79b1833f0ef7d1b 823 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 157 2.1E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_02230 75d81b2271e14581e79b1833f0ef7d1b 823 SUPERFAMILY SSF56935 34 821 6.0E-101 T 14-10-2018 AMBLS11_02230 75d81b2271e14581e79b1833f0ef7d1b 823 Pfam PF00593 TonB dependent receptor 348 819 4.3E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_02230 75d81b2271e14581e79b1833f0ef7d1b 823 Gene3D G3DSA:2.40.170.20 44 821 8.2E-110 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_15845 2fc826da196011e2e24480deb08405e5 278 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 50 248 3.1E-55 T 14-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 AMBLS11_13740 a73f299a06b6ac60aa4159115f7200a6 965 SUPERFAMILY SSF53383 20 442 1.74E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_13740 a73f299a06b6ac60aa4159115f7200a6 965 Gene3D G3DSA:3.90.1150.10 770 908 1.6E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_13740 a73f299a06b6ac60aa4159115f7200a6 965 Pfam PF02347 Glycine cleavage system P-protein 19 442 6.1E-184 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMBLS11_13740 a73f299a06b6ac60aa4159115f7200a6 965 Pfam PF02347 Glycine cleavage system P-protein 465 740 3.5E-7 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMBLS11_13740 a73f299a06b6ac60aa4159115f7200a6 965 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 956 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMBLS11_13740 a73f299a06b6ac60aa4159115f7200a6 965 SUPERFAMILY SSF53383 484 957 6.2E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_13740 a73f299a06b6ac60aa4159115f7200a6 965 Gene3D G3DSA:3.40.640.10 529 758 2.0E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_13740 a73f299a06b6ac60aa4159115f7200a6 965 Gene3D G3DSA:3.40.640.10 98 357 1.2E-103 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_13740 a73f299a06b6ac60aa4159115f7200a6 965 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 962 25.528 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMBLS11_11460 3bea8efefa7c9587b63fd20f0f1ecf0d 507 Gene3D G3DSA:3.60.20.10 2 412 3.7E-155 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_11460 3bea8efefa7c9587b63fd20f0f1ecf0d 507 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.862 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMBLS11_11460 3bea8efefa7c9587b63fd20f0f1ecf0d 507 SUPERFAMILY SSF56235 2 257 1.54E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_11460 3bea8efefa7c9587b63fd20f0f1ecf0d 507 Gene3D G3DSA:3.40.50.2020 277 441 3.7E-155 T 14-10-2018 AMBLS11_11460 3bea8efefa7c9587b63fd20f0f1ecf0d 507 Pfam PF13522 Glutamine amidotransferase domain 64 208 3.2E-17 T 14-10-2018 AMBLS11_11460 3bea8efefa7c9587b63fd20f0f1ecf0d 507 Pfam PF00156 Phosphoribosyl transferase domain 280 392 7.7E-8 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMBLS11_11460 3bea8efefa7c9587b63fd20f0f1ecf0d 507 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 8.0E-157 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMBLS11_11460 3bea8efefa7c9587b63fd20f0f1ecf0d 507 SUPERFAMILY SSF53271 250 481 3.8E-69 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMBLS11_11460 3bea8efefa7c9587b63fd20f0f1ecf0d 507 PIRSF PIRSF000485 1 481 6.6E-166 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMBLS11_05165 e12c55986b131af387aad44f763eb3c6 152 Pfam PF02631 RecX family 31 148 4.6E-24 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AMBLS11_05165 e12c55986b131af387aad44f763eb3c6 152 Gene3D G3DSA:1.10.10.10 56 99 8.7E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05165 e12c55986b131af387aad44f763eb3c6 152 Hamap MF_01114 Regulatory protein RecX [recX]. 1 151 12.567 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AMBLS11_05165 e12c55986b131af387aad44f763eb3c6 152 Gene3D G3DSA:1.10.10.10 9 54 6.6E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05165 e12c55986b131af387aad44f763eb3c6 152 Gene3D G3DSA:1.10.10.10 101 148 2.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_12205 b1ea77cda1ee78fc151c2a3430fe487d 418 SUPERFAMILY SSF53383 6 417 8.02E-182 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_12205 b1ea77cda1ee78fc151c2a3430fe487d 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 418 52.842 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMBLS11_12205 b1ea77cda1ee78fc151c2a3430fe487d 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMBLS11_12205 b1ea77cda1ee78fc151c2a3430fe487d 418 Gene3D G3DSA:3.40.640.10 37 290 4.1E-186 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_12205 b1ea77cda1ee78fc151c2a3430fe487d 418 PIRSF PIRSF000412 1 418 8.2E-169 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMBLS11_12205 b1ea77cda1ee78fc151c2a3430fe487d 418 Gene3D G3DSA:3.90.1150.10 10 395 4.1E-186 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_12205 b1ea77cda1ee78fc151c2a3430fe487d 418 Pfam PF00464 Serine hydroxymethyltransferase 9 387 5.3E-185 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMBLS11_06835 d3a54084547c921eabc0e2a238a74f8d 468 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 90 105 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_06835 d3a54084547c921eabc0e2a238a74f8d 468 Pfam PF01235 Sodium:alanine symporter family 53 448 1.4E-147 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_06835 d3a54084547c921eabc0e2a238a74f8d 468 PRINTS PR00175 Sodium/alanine symporter signature 209 228 1.1E-51 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_06835 d3a54084547c921eabc0e2a238a74f8d 468 PRINTS PR00175 Sodium/alanine symporter signature 90 112 1.1E-51 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_06835 d3a54084547c921eabc0e2a238a74f8d 468 PRINTS PR00175 Sodium/alanine symporter signature 181 199 1.1E-51 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_06835 d3a54084547c921eabc0e2a238a74f8d 468 PRINTS PR00175 Sodium/alanine symporter signature 347 369 1.1E-51 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_06835 d3a54084547c921eabc0e2a238a74f8d 468 PRINTS PR00175 Sodium/alanine symporter signature 408 428 1.1E-51 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_06835 d3a54084547c921eabc0e2a238a74f8d 468 PRINTS PR00175 Sodium/alanine symporter signature 302 320 1.1E-51 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_06835 d3a54084547c921eabc0e2a238a74f8d 468 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 439 8.1E-141 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_14210 cee55470f2e7707e2e27de5f3534c36f 370 SUPERFAMILY SSF52540 2 335 1.08E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14210 cee55470f2e7707e2e27de5f3534c36f 370 Gene3D G3DSA:3.40.50.300 100 354 8.1E-89 T 14-10-2018 AMBLS11_14210 cee55470f2e7707e2e27de5f3534c36f 370 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 343 5.7E-129 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AMBLS11_14210 cee55470f2e7707e2e27de5f3534c36f 370 SMART SM00382 121 246 2.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_14210 cee55470f2e7707e2e27de5f3534c36f 370 Gene3D G3DSA:3.30.450.90 1 98 1.9E-25 T 14-10-2018 AMBLS11_14210 cee55470f2e7707e2e27de5f3534c36f 370 Pfam PF00437 Type II/IV secretion system protein 11 268 4.8E-39 T 14-10-2018 IPR001482 Type II/IV secretion system protein AMBLS11_06860 6d0f0b89d704b1942d7d6c8f61b871be 210 Gene3D G3DSA:2.40.240.10 3 98 8.1E-34 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_06860 6d0f0b89d704b1942d7d6c8f61b871be 210 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 6 98 25.016 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMBLS11_06860 6d0f0b89d704b1942d7d6c8f61b871be 210 Pfam PF01386 Ribosomal L25p family 8 95 2.3E-26 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMBLS11_06860 6d0f0b89d704b1942d7d6c8f61b871be 210 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 192 1.4E-30 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain AMBLS11_06860 6d0f0b89d704b1942d7d6c8f61b871be 210 Gene3D G3DSA:2.170.120.20 101 201 1.6E-27 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal AMBLS11_06860 6d0f0b89d704b1942d7d6c8f61b871be 210 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 10 98 5.0E-33 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMBLS11_06860 6d0f0b89d704b1942d7d6c8f61b871be 210 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 191 31.097 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMBLS11_06860 6d0f0b89d704b1942d7d6c8f61b871be 210 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 176 9.7E-47 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMBLS11_06860 6d0f0b89d704b1942d7d6c8f61b871be 210 SUPERFAMILY SSF50715 6 200 9.77E-56 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_04640 1d8b83786ab4668a19481141f436bab6 299 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 297 1.3E-42 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_04640 1d8b83786ab4668a19481141f436bab6 299 Pfam PF00990 Diguanylate cyclase, GGDEF domain 143 294 6.3E-41 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_04640 1d8b83786ab4668a19481141f436bab6 299 SMART SM00267 131 299 7.8E-50 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_04640 1d8b83786ab4668a19481141f436bab6 299 Gene3D G3DSA:3.30.70.270 134 298 2.6E-47 T 14-10-2018 AMBLS11_04640 1d8b83786ab4668a19481141f436bab6 299 SUPERFAMILY SSF55073 147 297 4.0E-42 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_16680 364db81fe513bb3013c9dcf949969aad 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.276 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMBLS11_16680 364db81fe513bb3013c9dcf949969aad 174 SUPERFAMILY SSF56235 2 172 7.12E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_16680 364db81fe513bb3013c9dcf949969aad 174 PIRSF PIRSF039093 1 174 7.5E-86 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMBLS11_16680 364db81fe513bb3013c9dcf949969aad 174 Gene3D G3DSA:3.60.20.10 1 173 5.6E-66 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_16680 364db81fe513bb3013c9dcf949969aad 174 Pfam PF00227 Proteasome subunit 2 169 3.7E-23 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AMBLS11_16680 364db81fe513bb3013c9dcf949969aad 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 171 2.4E-85 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 SMART SM00257 404 447 2.7E-14 T 14-10-2018 IPR018392 LysM domain AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 Pfam PF01476 LysM domain 405 447 8.1E-11 T 14-10-2018 IPR018392 LysM domain AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 Pfam PF11741 AMIN domain 28 128 3.4E-20 T 14-10-2018 IPR021731 AMIN domain AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 163 380 1.2E-45 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 SUPERFAMILY SSF54106 403 447 3.4E-10 T 14-10-2018 AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 SMART SM00646 223 382 1.5E-48 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 SUPERFAMILY SSF53187 161 386 1.38E-51 T 14-10-2018 AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 Gene3D G3DSA:2.60.40.3500 15 130 4.7E-26 T 14-10-2018 AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 Gene3D G3DSA:3.10.350.10 400 449 1.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily AMBLS11_17310 119a614ac4b89a144510731b2cd0e80f 449 Gene3D G3DSA:3.40.630.40 150 390 2.0E-71 T 14-10-2018 AMBLS11_16290 d37dc3987f353b56224ed7f7672e0e36 789 SUPERFAMILY SSF53756 441 781 3.05E-33 T 14-10-2018 AMBLS11_16290 d37dc3987f353b56224ed7f7672e0e36 789 Gene3D G3DSA:3.40.50.2000 486 592 8.8E-27 T 14-10-2018 AMBLS11_16290 d37dc3987f353b56224ed7f7672e0e36 789 Gene3D G3DSA:3.90.550.10 60 346 3.8E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16290 d37dc3987f353b56224ed7f7672e0e36 789 Pfam PF00534 Glycosyl transferases group 1 604 747 1.9E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_16290 d37dc3987f353b56224ed7f7672e0e36 789 Gene3D G3DSA:3.40.50.2000 593 750 8.8E-27 T 14-10-2018 AMBLS11_16290 d37dc3987f353b56224ed7f7672e0e36 789 Pfam PF00535 Glycosyl transferase family 2 102 230 1.5E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_16290 d37dc3987f353b56224ed7f7672e0e36 789 SUPERFAMILY SSF53448 99 311 6.09E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 Gene3D G3DSA:1.10.8.540 509 598 6.1E-25 T 14-10-2018 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 697 7.2E-259 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 14-10-2018 IPR025505 FHIPEP conserved site AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 Gene3D G3DSA:3.40.30.60 365 508 2.3E-50 T 14-10-2018 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 PIRSF PIRSF005419 7 699 3.7E-242 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 Gene3D G3DSA:1.10.490.80 600 697 1.3E-12 T 14-10-2018 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 Pfam PF00771 FHIPEP family 31 689 5.3E-262 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMBLS11_05035 35758c9921eccdfdabed42e6c94e640e 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.5E-54 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 Pfam PF01327 Polypeptide deformylase 5 152 3.6E-51 T 14-10-2018 IPR023635 Peptide deformylase AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 PIRSF PIRSF004749 1 168 4.0E-57 T 14-10-2018 IPR023635 Peptide deformylase AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 Gene3D G3DSA:3.90.45.10 1 167 4.4E-65 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 6.1E-59 T 14-10-2018 IPR023635 Peptide deformylase AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 SUPERFAMILY SSF56420 2 164 3.93E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 PRINTS PR01576 Peptide deformylase signature 101 119 5.8E-38 T 14-10-2018 IPR023635 Peptide deformylase AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 PRINTS PR01576 Peptide deformylase signature 33 62 5.8E-38 T 14-10-2018 IPR023635 Peptide deformylase AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 PRINTS PR01576 Peptide deformylase signature 120 149 5.8E-38 T 14-10-2018 IPR023635 Peptide deformylase AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 PRINTS PR01576 Peptide deformylase signature 89 100 5.8E-38 T 14-10-2018 IPR023635 Peptide deformylase AMBLS11_00110 5e38ba8a74394224d6eb7b1195f70933 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.13 T 14-10-2018 IPR023635 Peptide deformylase AMBLS11_13910 6a045a04e2ebe9f4e328dd3e06297c29 425 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 371 1.2E-81 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_13910 6a045a04e2ebe9f4e328dd3e06297c29 425 Gene3D G3DSA:2.40.50.100 65 208 3.8E-94 T 14-10-2018 AMBLS11_13910 6a045a04e2ebe9f4e328dd3e06297c29 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 291 9.6E-22 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_13910 6a045a04e2ebe9f4e328dd3e06297c29 425 Gene3D G3DSA:1.10.287.470 100 173 3.8E-94 T 14-10-2018 AMBLS11_13910 6a045a04e2ebe9f4e328dd3e06297c29 425 Gene3D G3DSA:2.40.420.20 302 370 3.8E-94 T 14-10-2018 AMBLS11_13910 6a045a04e2ebe9f4e328dd3e06297c29 425 SUPERFAMILY SSF111369 55 295 9.68E-64 T 14-10-2018 AMBLS11_13910 6a045a04e2ebe9f4e328dd3e06297c29 425 Gene3D G3DSA:2.40.30.170 52 301 3.8E-94 T 14-10-2018 AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 292 1.4E-87 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 SUPERFAMILY SSF53850 89 288 8.51E-19 T 14-10-2018 AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 Gene3D G3DSA:3.40.190.290 85 293 1.2E-58 T 14-10-2018 AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 SUPERFAMILY SSF46785 1 106 2.1E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 7.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 Pfam PF03466 LysR substrate binding domain 90 287 9.5E-12 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_00635 f98d3982ff3c6293e6ece3d2e9493a94 294 Gene3D G3DSA:1.10.10.10 1 81 5.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 SUPERFAMILY SSF52029 185 376 5.23E-86 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 Gene3D G3DSA:3.30.260.10 136 410 6.9E-242 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 SUPERFAMILY SSF48592 7 521 3.44E-78 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 4.0E-98 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.854 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 SUPERFAMILY SSF54849 138 203 4.35E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 Gene3D G3DSA:1.10.560.10 8 521 6.9E-242 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 Gene3D G3DSA:3.50.7.10 192 372 6.9E-242 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.3E-257 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMBLS11_18040 b60feeecc3840870f496626dac2a4fea 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 Gene3D G3DSA:2.40.340.10 327 397 2.5E-132 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 SUPERFAMILY SSF63882 6 175 3.66E-51 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 175 311 4.5E-28 T 14-10-2018 IPR001453 MoaB/Mog domain AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 SUPERFAMILY SSF63867 328 402 1.31E-20 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 Pfam PF03454 MoeA C-terminal region (domain IV) 331 402 4.9E-17 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 SMART SM00852 179 316 1.2E-34 T 14-10-2018 IPR001453 MoaB/Mog domain AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 Gene3D G3DSA:3.90.105.10 25 173 2.5E-132 T 14-10-2018 AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 252 285 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 Gene3D G3DSA:2.170.190.11 49 140 2.5E-132 T 14-10-2018 AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 Pfam PF00994 Probable molybdopterin binding domain 179 315 6.9E-20 T 14-10-2018 IPR001453 MoaB/Mog domain AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 SUPERFAMILY SSF53218 176 321 2.09E-38 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 Gene3D G3DSA:3.40.980.10 174 326 2.5E-132 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMBLS11_10080 03555f442939646828ca79e3a9a88848 404 Pfam PF03453 MoeA N-terminal region (domain I and II) 7 166 2.1E-43 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_03815 a29bc19bb09b91b2ed6ed20ee3eb36fe 361 SUPERFAMILY SSF111369 45 269 6.93E-50 T 14-10-2018 AMBLS11_03815 a29bc19bb09b91b2ed6ed20ee3eb36fe 361 Gene3D G3DSA:2.40.30.170 45 273 1.1E-78 T 14-10-2018 AMBLS11_03815 a29bc19bb09b91b2ed6ed20ee3eb36fe 361 Gene3D G3DSA:2.40.50.100 57 185 1.1E-78 T 14-10-2018 AMBLS11_03815 a29bc19bb09b91b2ed6ed20ee3eb36fe 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 261 2.6E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_03815 a29bc19bb09b91b2ed6ed20ee3eb36fe 361 Gene3D G3DSA:1.10.287.470 92 151 1.1E-78 T 14-10-2018 AMBLS11_03815 a29bc19bb09b91b2ed6ed20ee3eb36fe 361 Gene3D G3DSA:2.40.420.20 274 341 1.1E-78 T 14-10-2018 AMBLS11_03815 a29bc19bb09b91b2ed6ed20ee3eb36fe 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 343 5.4E-62 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_12120 ae0c43d674185abca9736db86768e00f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.2E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12120 ae0c43d674185abca9736db86768e00f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 6.2E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12120 ae0c43d674185abca9736db86768e00f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 6.2E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12120 ae0c43d674185abca9736db86768e00f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 6.2E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12120 ae0c43d674185abca9736db86768e00f 239 Gene3D G3DSA:3.40.50.720 1 238 1.7E-56 T 14-10-2018 AMBLS11_12120 ae0c43d674185abca9736db86768e00f 239 SUPERFAMILY SSF51735 2 232 4.77E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_12120 ae0c43d674185abca9736db86768e00f 239 Pfam PF00106 short chain dehydrogenase 2 179 1.0E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_00295 804dc95e2d40ae8ac15eacd4036fea36 398 Gene3D G3DSA:3.90.1150.10 40 387 8.7E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_00295 804dc95e2d40ae8ac15eacd4036fea36 398 SUPERFAMILY SSF53383 5 396 1.86E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_00295 804dc95e2d40ae8ac15eacd4036fea36 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 7 397 3.9E-212 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AMBLS11_00295 804dc95e2d40ae8ac15eacd4036fea36 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMBLS11_00295 804dc95e2d40ae8ac15eacd4036fea36 398 Gene3D G3DSA:3.40.640.10 58 296 8.7E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_00295 804dc95e2d40ae8ac15eacd4036fea36 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 54.011 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AMBLS11_00295 804dc95e2d40ae8ac15eacd4036fea36 398 Pfam PF00155 Aminotransferase class I and II 43 387 1.3E-74 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_15935 8531580c5ba283aa5284f507e4d5612b 254 SMART SM00900 145 241 2.4E-26 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMBLS11_15935 8531580c5ba283aa5284f507e4d5612b 254 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 251 34.228 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AMBLS11_15935 8531580c5ba283aa5284f507e4d5612b 254 PIRSF PIRSF009437 1 253 1.5E-85 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AMBLS11_15935 8531580c5ba283aa5284f507e4d5612b 254 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 249 6.1E-77 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AMBLS11_15935 8531580c5ba283aa5284f507e4d5612b 254 Pfam PF04205 FMN-binding domain 145 237 3.5E-13 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMBLS11_05345 7f9782b20c3033cc1c4020bc51833f69 421 Pfam PF13432 Tetratricopeptide repeat 305 365 2.5E-4 T 14-10-2018 AMBLS11_05345 7f9782b20c3033cc1c4020bc51833f69 421 Gene3D G3DSA:1.25.40.10 53 411 9.3E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_05345 7f9782b20c3033cc1c4020bc51833f69 421 SUPERFAMILY SSF48452 132 393 1.04E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_05345 7f9782b20c3033cc1c4020bc51833f69 421 SMART SM00028 159 192 1.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05345 7f9782b20c3033cc1c4020bc51833f69 421 SMART SM00028 333 365 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05345 7f9782b20c3033cc1c4020bc51833f69 421 SMART SM00028 299 332 1.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05345 7f9782b20c3033cc1c4020bc51833f69 421 SMART SM00028 124 157 340.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_06915 00c3698cdf8018d4c032cfb0a88bba44 123 PIRSF PIRSF005610 1 119 1.4E-24 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AMBLS11_06915 00c3698cdf8018d4c032cfb0a88bba44 123 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 121 5.0E-41 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AMBLS11_07785 b176d25643c207b3fb280335ed1bc32d 448 Pfam PF00375 Sodium:dicarboxylate symporter family 10 417 4.8E-131 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMBLS11_07785 b176d25643c207b3fb280335ed1bc32d 448 SUPERFAMILY SSF118215 10 419 1.03E-120 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMBLS11_07785 b176d25643c207b3fb280335ed1bc32d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 1.8E-39 T 14-10-2018 AMBLS11_07785 b176d25643c207b3fb280335ed1bc32d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 345 364 1.8E-39 T 14-10-2018 AMBLS11_07785 b176d25643c207b3fb280335ed1bc32d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 208 227 1.8E-39 T 14-10-2018 AMBLS11_07785 b176d25643c207b3fb280335ed1bc32d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 98 123 1.8E-39 T 14-10-2018 AMBLS11_07785 b176d25643c207b3fb280335ed1bc32d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 372 392 1.8E-39 T 14-10-2018 AMBLS11_07785 b176d25643c207b3fb280335ed1bc32d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 310 336 1.8E-39 T 14-10-2018 AMBLS11_07785 b176d25643c207b3fb280335ed1bc32d 448 Gene3D G3DSA:1.10.3860.10 1 435 5.0E-138 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMBLS11_07515 3dab9d3439844e492278d7e02ffeed2a 800 Gene3D G3DSA:1.10.1400.10 559 695 2.9E-98 T 14-10-2018 AMBLS11_07515 3dab9d3439844e492278d7e02ffeed2a 800 Gene3D G3DSA:1.10.439.10 20 178 1.6E-40 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 AMBLS11_07515 3dab9d3439844e492278d7e02ffeed2a 800 Gene3D G3DSA:3.60.20.10 285 777 2.9E-98 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_07515 3dab9d3439844e492278d7e02ffeed2a 800 Pfam PF01804 Penicillin amidase 48 784 7.7E-125 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AMBLS11_07515 3dab9d3439844e492278d7e02ffeed2a 800 PIRSF PIRSF001227 7 793 8.6E-127 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AMBLS11_07515 3dab9d3439844e492278d7e02ffeed2a 800 Gene3D G3DSA:2.30.120.10 361 412 2.9E-98 T 14-10-2018 AMBLS11_07515 3dab9d3439844e492278d7e02ffeed2a 800 SUPERFAMILY SSF56235 44 787 6.69E-166 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_12625 d4a33ca478e2e02a694d5bab32dc3594 1356 Pfam PF05567 Neisseria PilC beta-propeller domain 873 1089 5.4E-21 T 14-10-2018 IPR008707 PilC beta-propeller domain AMBLS11_12625 d4a33ca478e2e02a694d5bab32dc3594 1356 SUPERFAMILY SSF50998 849 1187 5.36E-13 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMBLS11_12625 d4a33ca478e2e02a694d5bab32dc3594 1356 SUPERFAMILY SSF53300 579 684 1.45E-5 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMBLS11_12625 d4a33ca478e2e02a694d5bab32dc3594 1356 Gene3D G3DSA:3.40.50.410 41 175 2.1E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMBLS11_12625 d4a33ca478e2e02a694d5bab32dc3594 1356 Gene3D G3DSA:2.130.10.10 829 1160 1.2E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 Gene3D G3DSA:3.40.50.620 1 141 2.4E-27 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 338 350 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 SUPERFAMILY SSF52425 15 196 9.42E-42 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 PRINTS PR00147 DNA photolyase signature 397 411 7.8E-13 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 PRINTS PR00147 DNA photolyase signature 338 354 7.8E-13 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 PRINTS PR00147 DNA photolyase signature 358 376 7.8E-13 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 Gene3D G3DSA:1.25.40.80 146 311 8.2E-46 T 14-10-2018 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 Pfam PF00875 DNA photolyase 18 179 5.6E-31 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 SUPERFAMILY SSF48173 215 435 1.96E-69 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 16 435 4.2E-149 T 14-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 Pfam PF03441 FAD binding domain of DNA photolyase 291 435 1.2E-44 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AMBLS11_09430 3b934507b9d353223495d68062255e5d 435 Gene3D G3DSA:1.10.579.10 312 435 2.3E-53 T 14-10-2018 AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 SMART SM00267 314 477 6.6E-13 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 Pfam PF00990 Diguanylate cyclase, GGDEF domain 325 469 3.5E-17 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 SMART SM00052 483 732 1.7E-102 T 14-10-2018 IPR001633 EAL domain AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 Gene3D G3DSA:3.40.50.2300 26 170 1.3E-14 T 14-10-2018 AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 Gene3D G3DSA:3.30.70.270 319 489 2.1E-25 T 14-10-2018 AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 SMART SM00448 30 153 0.0053 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 322 472 3.4E-14 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 SUPERFAMILY SSF55073 330 477 1.18E-20 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 Pfam PF11849 Domain of unknown function (DUF3369) 153 321 9.1E-52 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 SUPERFAMILY SSF141868 493 739 3.27E-82 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 Pfam PF00072 Response regulator receiver domain 32 150 3.6E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 SUPERFAMILY SSF52172 29 162 1.85E-12 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 Gene3D G3DSA:3.20.20.450 490 739 4.7E-89 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_15555 ce3f76e13278fb70dc4f34a942154e86 741 Pfam PF00563 EAL domain 493 727 1.8E-66 T 14-10-2018 IPR001633 EAL domain AMBLS11_00255 09de6254121640785b517234e6668121 51 Pfam PF00471 Ribosomal protein L33 4 49 3.8E-18 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_00255 09de6254121640785b517234e6668121 51 Gene3D G3DSA:2.20.28.120 1 51 8.9E-29 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_00255 09de6254121640785b517234e6668121 51 SUPERFAMILY SSF57829 1 49 2.2E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMBLS11_00255 09de6254121640785b517234e6668121 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_00255 09de6254121640785b517234e6668121 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.977 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_00255 09de6254121640785b517234e6668121 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 1.1E-23 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 SMART SM00267 244 409 2.2E-41 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 Pfam PF00072 Response regulator receiver domain 126 234 4.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 Pfam PF00072 Response regulator receiver domain 4 105 4.2E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 SUPERFAMILY SSF55073 260 409 3.61E-33 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 SUPERFAMILY SSF52172 1 109 1.37E-16 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 405 3.3E-35 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 Gene3D G3DSA:3.40.50.2300 1 121 4.8E-15 T 14-10-2018 AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 Gene3D G3DSA:3.30.70.270 257 416 3.9E-40 T 14-10-2018 AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 SUPERFAMILY SSF52172 125 259 3.13E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 SMART SM00448 124 238 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 SMART SM00448 2 118 2.4E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 Gene3D G3DSA:3.40.50.2300 122 256 8.0E-32 T 14-10-2018 AMBLS11_14580 092dee39de72e3e18b77516b70b8bfa7 418 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 408 1.1E-36 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_03860 fd79c89886888b6f4ae1a3c5fe2fd329 519 Gene3D G3DSA:1.10.3720.10 262 516 3.2E-31 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_03860 fd79c89886888b6f4ae1a3c5fe2fd329 519 SUPERFAMILY SSF161098 246 504 4.71E-36 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_03860 fd79c89886888b6f4ae1a3c5fe2fd329 519 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 289 514 1.6E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMBLS11_03860 fd79c89886888b6f4ae1a3c5fe2fd329 519 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 255 513 5.1E-73 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AMBLS11_06100 4d9ace8e85e054144b6760e55fa1f9ed 283 Pfam PF01904 Protein of unknown function DUF72 17 257 6.6E-59 T 14-10-2018 IPR002763 Protein of unknown function DUF72 AMBLS11_06100 4d9ace8e85e054144b6760e55fa1f9ed 283 Gene3D G3DSA:3.20.20.410 1 272 6.5E-42 T 14-10-2018 IPR036520 UPF0759 superfamily AMBLS11_06100 4d9ace8e85e054144b6760e55fa1f9ed 283 SUPERFAMILY SSF117396 1 258 9.68E-66 T 14-10-2018 IPR036520 UPF0759 superfamily AMBLS11_15480 507199ca1ed45a454a813fc1cc735a1d 121 Pfam PF00072 Response regulator receiver domain 5 112 6.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15480 507199ca1ed45a454a813fc1cc735a1d 121 SUPERFAMILY SSF52172 3 117 2.7E-27 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_15480 507199ca1ed45a454a813fc1cc735a1d 121 SMART SM00448 3 115 2.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15480 507199ca1ed45a454a813fc1cc735a1d 121 Gene3D G3DSA:3.40.50.2300 1 118 3.9E-27 T 14-10-2018 AMBLS11_06095 fd087de7fcbeb639e0ad112c0ff44508 161 Pfam PF01590 GAF domain 24 151 5.8E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_06095 fd087de7fcbeb639e0ad112c0ff44508 161 Gene3D G3DSA:3.30.450.40 8 157 5.1E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_06095 fd087de7fcbeb639e0ad112c0ff44508 161 SMART SM00065 22 160 0.0044 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_06095 fd087de7fcbeb639e0ad112c0ff44508 161 SUPERFAMILY SSF55781 23 154 2.35E-20 T 14-10-2018 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Gene3D G3DSA:2.60.40.2380 36 171 2.8E-16 T 14-10-2018 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 SUPERFAMILY SSF47226 899 1031 6.15E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 SMART SM00448 803 916 1.8E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 654 2.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 635 2.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 596 2.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 610 2.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 SMART SM00388 430 495 8.3E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 SUPERFAMILY SSF47384 417 496 1.1E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 SUPERFAMILY SSF52172 801 922 2.99E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 SUPERFAMILY SSF55874 484 654 1.96E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Gene3D G3DSA:3.40.50.2300 800 926 2.2E-37 T 14-10-2018 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 SMART SM00387 541 657 8.0E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 541 655 8.2E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 SMART SM00073 942 1036 2.6E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Pfam PF01627 Hpt domain 951 1027 1.4E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Gene3D G3DSA:3.30.565.10 494 660 5.9E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Pfam PF07696 7TMR-DISM extracellular 2 42 169 3.9E-24 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Gene3D G3DSA:1.20.120.160 931 1037 5.3E-26 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Pfam PF07695 7TM diverse intracellular signalling 182 386 3.6E-43 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Gene3D G3DSA:1.10.287.130 393 493 3.8E-26 T 14-10-2018 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Pfam PF00512 His Kinase A (phospho-acceptor) domain 431 495 1.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_01920 75aed669e3881f68287984d25d4e08e5 1042 Pfam PF00072 Response regulator receiver domain 805 916 2.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 42.851 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 10 34 5.9E-94 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 322 345 5.9E-94 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 248 274 5.9E-94 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 174 198 5.9E-94 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 83 111 5.9E-94 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 124 141 5.9E-94 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 PRINTS PR01874 DNA repair protein radA signature 213 241 5.9E-94 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 Gene3D G3DSA:3.40.50.300 66 279 2.1E-37 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 Gene3D G3DSA:3.30.230.10 303 455 1.8E-22 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 SUPERFAMILY SSF52540 68 291 3.58E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 SMART SM00382 91 244 1.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 2.4E-219 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 430 4.7E-10 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 Pfam PF13481 AAA domain 75 222 1.7E-10 T 14-10-2018 AMBLS11_12225 2c8876d78d5f2360a77cbf5835cbae43 455 SUPERFAMILY SSF54211 255 454 1.52E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_17765 ca056dcd3734f4fb61ef6f1b40fcbb5e 340 Gene3D G3DSA:3.40.50.2300 145 331 7.5E-34 T 14-10-2018 AMBLS11_17765 ca056dcd3734f4fb61ef6f1b40fcbb5e 340 Pfam PF04392 ABC transporter substrate binding protein 42 337 6.4E-17 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein AMBLS11_17765 ca056dcd3734f4fb61ef6f1b40fcbb5e 340 Gene3D G3DSA:3.40.50.2300 61 309 7.5E-34 T 14-10-2018 AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 Gene3D G3DSA:1.10.10.60 302 365 1.6E-8 T 14-10-2018 AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 96 111 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 Pfam PF00158 Sigma-54 interaction domain 11 173 6.7E-59 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 Pfam PF02954 Bacterial regulatory protein, Fis family 328 362 1.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 Gene3D G3DSA:1.10.8.60 182 265 6.0E-26 T 14-10-2018 AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 SUPERFAMILY SSF46689 224 364 1.15E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 SUPERFAMILY SSF52540 10 249 4.79E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 Gene3D G3DSA:3.40.50.300 1 181 7.3E-58 T 14-10-2018 AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 10 362 2.0E-165 T 14-10-2018 IPR014317 Transcription activator PspF AMBLS11_05225 17a19052c87a6881ad4b95dc5c657754 374 SMART SM00382 30 177 5.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Gene3D G3DSA:3.30.420.10 327 542 1.4E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Gene3D G3DSA:1.20.1060.10 543 658 4.3E-43 T 14-10-2018 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 TIGRFAM TIGR00593 pola: DNA polymerase I 10 929 2.2E-288 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 SMART SM00279 173 208 4.7E-10 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Gene3D G3DSA:1.10.150.20 709 852 2.9E-116 T 14-10-2018 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 SMART SM00475 5 268 9.8E-123 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 SUPERFAMILY SSF53098 333 518 1.44E-58 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 5.4E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 5.4E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 5.4E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 5.4E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 876 889 5.4E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 5.4E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 5.4E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 5.4E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 5.4E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Pfam PF00476 DNA polymerase family A 550 927 4.3E-161 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 SUPERFAMILY SSF56672 522 929 2.56E-162 T 14-10-2018 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Gene3D G3DSA:1.10.150.20 174 253 1.5E-95 T 14-10-2018 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 SUPERFAMILY SSF47807 171 293 1.5E-27 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Gene3D G3DSA:3.30.70.370 664 925 2.9E-116 T 14-10-2018 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Pfam PF01612 3'-5' exonuclease 330 516 1.0E-42 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 SMART SM00482 686 893 2.7E-122 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.7E-56 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 SUPERFAMILY SSF88723 3 170 5.89E-59 T 14-10-2018 IPR029060 PIN-like domain superfamily AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 9.9E-27 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 SMART SM00474 330 517 1.1E-42 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMBLS11_00070 9ba3cd442823cb18f718a6f1888b74ea 929 Gene3D G3DSA:3.40.50.1010 10 284 1.5E-95 T 14-10-2018 AMBLS11_17400 974a7564d51e1c6e94b87bd89f46de72 191 Pfam PF08281 Sigma-70, region 4 132 182 5.1E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_17400 974a7564d51e1c6e94b87bd89f46de72 191 SUPERFAMILY SSF88659 131 186 3.74E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_17400 974a7564d51e1c6e94b87bd89f46de72 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 184 8.7E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_17400 974a7564d51e1c6e94b87bd89f46de72 191 Pfam PF04542 Sigma-70 region 2 38 104 9.6E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_17400 974a7564d51e1c6e94b87bd89f46de72 191 Gene3D G3DSA:1.10.1740.10 15 127 2.6E-30 T 14-10-2018 AMBLS11_17400 974a7564d51e1c6e94b87bd89f46de72 191 Gene3D G3DSA:1.10.10.10 128 187 1.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_17400 974a7564d51e1c6e94b87bd89f46de72 191 SUPERFAMILY SSF88946 17 113 3.14E-28 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 Gene3D G3DSA:3.30.450.20 177 293 3.0E-11 T 14-10-2018 AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 SUPERFAMILY SSF141868 472 716 4.05E-69 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 SUPERFAMILY SSF55785 101 174 8.72E-7 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 Gene3D G3DSA:3.30.70.270 294 458 1.0E-47 T 14-10-2018 AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 Pfam PF00563 EAL domain 472 706 5.0E-60 T 14-10-2018 IPR001633 EAL domain AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 SUPERFAMILY SSF55073 304 458 1.57E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 Pfam PF13426 PAS domain 190 287 5.9E-4 T 14-10-2018 IPR000014 PAS domain AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 183 295 1.7E-7 T 14-10-2018 IPR000014 PAS domain AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 Gene3D G3DSA:3.20.20.450 465 719 8.6E-73 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 Pfam PF00990 Diguanylate cyclase, GGDEF domain 299 451 1.1E-37 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 Gene3D G3DSA:3.30.450.20 65 176 1.2E-9 T 14-10-2018 AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 SMART SM00052 466 711 6.1E-72 T 14-10-2018 IPR001633 EAL domain AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 SMART SM00086 127 171 1.2 T 14-10-2018 IPR001610 PAC motif AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 SMART SM00086 246 288 0.027 T 14-10-2018 IPR001610 PAC motif AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 SMART SM00267 288 456 1.3E-47 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 296 454 5.4E-38 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_01935 796554398fe97182cfc53f23d52d7443 722 SUPERFAMILY SSF55785 190 297 1.19E-10 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_16855 f9481b506e4eee32cdf068ca6167e58e 243 SMART SM00052 3 237 1.3E-11 T 14-10-2018 IPR001633 EAL domain AMBLS11_16855 f9481b506e4eee32cdf068ca6167e58e 243 Pfam PF00563 EAL domain 4 232 1.1E-42 T 14-10-2018 IPR001633 EAL domain AMBLS11_16855 f9481b506e4eee32cdf068ca6167e58e 243 Gene3D G3DSA:3.20.20.450 4 241 1.8E-45 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_16855 f9481b506e4eee32cdf068ca6167e58e 243 SUPERFAMILY SSF141868 7 234 5.23E-45 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_11400 c368a820f0da0b7020bc4f22a63ab486 498 Pfam PF00128 Alpha amylase, catalytic domain 39 238 9.7E-10 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_11400 c368a820f0da0b7020bc4f22a63ab486 498 PIRSF PIRSF003059 1 495 1.2E-151 T 14-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related AMBLS11_11400 c368a820f0da0b7020bc4f22a63ab486 498 SMART SM00642 8 437 3.7E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_11400 c368a820f0da0b7020bc4f22a63ab486 498 Gene3D G3DSA:3.90.400.10 90 180 7.7E-129 T 14-10-2018 AMBLS11_11400 c368a820f0da0b7020bc4f22a63ab486 498 Gene3D G3DSA:3.20.20.80 9 421 7.7E-129 T 14-10-2018 AMBLS11_11400 c368a820f0da0b7020bc4f22a63ab486 498 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 480 1.8E-128 T 14-10-2018 IPR022527 Sucrose phosphorylase GO:0004645|GO:0044262 AMBLS11_11400 c368a820f0da0b7020bc4f22a63ab486 498 SUPERFAMILY SSF51445 4 440 3.43E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_06575 ea181faeaa999bc401211c95118311d8 190 Pfam PF12464 Maltose acetyltransferase 6 57 6.9E-17 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMBLS11_06575 ea181faeaa999bc401211c95118311d8 190 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 1.9E-11 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_06575 ea181faeaa999bc401211c95118311d8 190 Gene3D G3DSA:2.160.10.10 1 185 5.7E-69 T 14-10-2018 AMBLS11_06575 ea181faeaa999bc401211c95118311d8 190 SMART SM01266 4 58 2.1E-21 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMBLS11_06575 ea181faeaa999bc401211c95118311d8 190 SUPERFAMILY SSF51161 2 185 2.08E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_12250 d8ab9a8ea75046f5d00d57a3f64b4aa8 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMBLS11_12250 d8ab9a8ea75046f5d00d57a3f64b4aa8 212 SUPERFAMILY SSF50475 14 212 4.12E-61 T 14-10-2018 AMBLS11_12250 d8ab9a8ea75046f5d00d57a3f64b4aa8 212 Gene3D G3DSA:2.30.110.10 1 212 9.9E-76 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMBLS11_12250 d8ab9a8ea75046f5d00d57a3f64b4aa8 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 212 1.4E-84 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMBLS11_12250 d8ab9a8ea75046f5d00d57a3f64b4aa8 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 2.1E-19 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMBLS11_12250 d8ab9a8ea75046f5d00d57a3f64b4aa8 212 PIRSF PIRSF000190 1 212 2.7E-80 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMBLS11_12250 d8ab9a8ea75046f5d00d57a3f64b4aa8 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 115 1.8E-20 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMBLS11_12250 d8ab9a8ea75046f5d00d57a3f64b4aa8 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 212 37.858 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMBLS11_15965 27a0bfd3bb7604e57d59fc453c0e0bf6 262 Pfam PF09844 Uncharacterized conserved protein (COG2071) 26 241 1.3E-33 T 14-10-2018 IPR018644 Protein of unknown function DUF2071 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 Pfam PF00403 Heavy-metal-associated domain 99 157 1.6E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 89 5.4E-24 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 731 1.0E-24 T 14-10-2018 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 SUPERFAMILY SSF55008 91 166 9.82E-16 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 Gene3D G3DSA:3.40.1110.10 519 650 4.2E-61 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 Gene3D G3DSA:3.30.70.100 89 160 3.1E-13 T 14-10-2018 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 511 517 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 Pfam PF00122 E1-E2 ATPase 315 489 5.7E-49 T 14-10-2018 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 283 555 7.3E-40 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 633 796 1.0E-29 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 ProSitePatterns PS01047 Heavy-metal-associated domain. 100 129 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 Gene3D G3DSA:2.70.150.20 305 415 3.5E-31 T 14-10-2018 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 740 752 1.4E-22 T 14-10-2018 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 1.4E-22 T 14-10-2018 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 523 1.4E-22 T 14-10-2018 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 736 1.4E-22 T 14-10-2018 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 249 819 2.6E-154 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 SUPERFAMILY SSF81653 319 410 2.62E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 Gene3D G3DSA:3.40.50.1000 489 756 4.2E-61 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 SUPERFAMILY SSF56784 507 816 1.02E-45 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 SUPERFAMILY SSF81665 264 503 6.8E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 689 705 6.9E-8 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 748 773 6.9E-8 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_09535 1c2e5e515073cb6ab8f4a91b447595d5 822 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 717 733 6.9E-8 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_18330 378e38c7760dc3d7c0c9a6599f78c399 543 PIRSF PIRSF006281 12 543 2.4E-168 T 14-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD AMBLS11_18330 378e38c7760dc3d7c0c9a6599f78c399 543 Gene3D G3DSA:2.70.98.10 60 432 6.9E-148 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMBLS11_18330 378e38c7760dc3d7c0c9a6599f78c399 543 Gene3D G3DSA:2.60.40.10 434 543 2.3E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_18330 378e38c7760dc3d7c0c9a6599f78c399 543 SUPERFAMILY SSF81296 433 542 2.24E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_18330 378e38c7760dc3d7c0c9a6599f78c399 543 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 62 540 2.7E-180 T 14-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AMBLS11_18330 378e38c7760dc3d7c0c9a6599f78c399 543 SUPERFAMILY SSF74650 63 430 5.65E-133 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 Pfam PF01037 Lrp/AsnC ligand binding domain 75 149 5.4E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 SMART SM00344 9 118 1.6E-48 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 2.4E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 2.4E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 2.4E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 SUPERFAMILY SSF46785 8 68 4.74E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 SUPERFAMILY SSF54909 71 156 7.37E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 56 9.4E-21 T 14-10-2018 AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 Gene3D G3DSA:3.30.70.920 61 155 7.6E-24 T 14-10-2018 AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 Gene3D G3DSA:1.10.10.10 3 60 4.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_09840 d40a6c8ac25ff73ad17dd6e240c5f63e 161 ProSitePatterns PS00519 AsnC-type HTH domain signature. 27 53 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 Gene3D G3DSA:2.70.98.90 75 342 3.4E-94 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR01900 YidC translocation/secretion protein signature 497 521 1.3E-23 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR01900 YidC translocation/secretion protein signature 348 364 1.3E-23 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR01900 YidC translocation/secretion protein signature 477 492 1.3E-23 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR00701 60kDa inner membrane protein signature 85 106 5.8E-92 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR00701 60kDa inner membrane protein signature 227 245 5.8E-92 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR00701 60kDa inner membrane protein signature 173 193 5.8E-92 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR00701 60kDa inner membrane protein signature 471 493 5.8E-92 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR00701 60kDa inner membrane protein signature 260 275 5.8E-92 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR00701 60kDa inner membrane protein signature 333 353 5.8E-92 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR00701 60kDa inner membrane protein signature 2 23 5.8E-92 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR00701 60kDa inner membrane protein signature 424 447 5.8E-92 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 PRINTS PR00701 60kDa inner membrane protein signature 508 531 5.8E-92 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 362 540 9.8E-68 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 361 5.1E-114 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 Pfam PF02096 60Kd inner membrane protein 363 541 5.9E-58 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 Pfam PF14849 YidC periplasmic domain 80 351 5.6E-83 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain AMBLS11_19015 cb9f7a8f5bf91389c1e6b5218a8de036 552 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 544 24.653 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 SMART SM00304 184 238 1.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 5.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 5.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 5.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 SUPERFAMILY SSF47384 222 302 9.22E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 SUPERFAMILY SSF158472 186 236 1.57E-10 T 14-10-2018 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 301 1.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 SMART SM00388 239 301 4.8E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 451 2.0E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 Gene3D G3DSA:3.30.565.10 305 452 2.1E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 SUPERFAMILY SSF55874 291 452 9.04E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 SMART SM00387 344 453 1.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 Gene3D G3DSA:1.10.287.130 188 302 1.5E-32 T 14-10-2018 AMBLS11_02130 a3580ccfcc4dcb127925bd502a4c2cb9 453 Pfam PF00672 HAMP domain 185 234 5.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_09100 082f7492f309a6044f1fc5c4301322eb 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 131 1.1E-7 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AMBLS11_09100 082f7492f309a6044f1fc5c4301322eb 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 151 290 9.2E-8 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AMBLS11_09100 082f7492f309a6044f1fc5c4301322eb 291 SUPERFAMILY SSF55620 155 289 3.56E-24 T 14-10-2018 AMBLS11_09100 082f7492f309a6044f1fc5c4301322eb 291 Gene3D G3DSA:3.30.479.10 152 290 2.4E-8 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AMBLS11_09100 082f7492f309a6044f1fc5c4301322eb 291 SUPERFAMILY SSF55620 1 156 3.0E-31 T 14-10-2018 AMBLS11_09100 082f7492f309a6044f1fc5c4301322eb 291 Gene3D G3DSA:3.30.479.10 12 151 3.8E-22 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 83 93 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 PIRSF PIRSF500176 1 331 1.1E-107 T 14-10-2018 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 Gene3D G3DSA:3.40.50.1170 1 207 1.2E-86 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 Gene3D G3DSA:3.40.50.40 208 335 2.7E-44 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 334 1.1E-107 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 PRINTS PR00139 Asparaginase/glutaminase family signature 259 277 6.5E-13 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 PRINTS PR00139 Asparaginase/glutaminase family signature 82 100 6.5E-13 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 6.5E-13 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 PIRSF PIRSF001220 1 333 5.2E-91 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 SUPERFAMILY SSF53774 2 334 1.57E-109 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 Pfam PF00710 Asparaginase, N-terminal 4 189 2.8E-65 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AMBLS11_08430 a48e3918b8eb331b77e44b3319cf6568 335 SMART SM00870 4 322 5.1E-134 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMBLS11_18335 1a286a82f590a270bbf07417c4424648 183 SUPERFAMILY SSF56925 28 145 4.71E-10 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMBLS11_18335 1a286a82f590a270bbf07417c4424648 183 Pfam PF13505 Outer membrane protein beta-barrel domain 8 169 2.6E-14 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel AMBLS11_18335 1a286a82f590a270bbf07417c4424648 183 Gene3D G3DSA:2.40.160.20 26 183 2.3E-8 T 14-10-2018 AMBLS11_15800 05d9d39cf82c1544e6480047001f123e 566 Gene3D G3DSA:3.20.20.140 97 523 1.3E-141 T 14-10-2018 AMBLS11_15800 05d9d39cf82c1544e6480047001f123e 566 Gene3D G3DSA:3.10.310.70 115 232 1.3E-141 T 14-10-2018 AMBLS11_15800 05d9d39cf82c1544e6480047001f123e 566 Pfam PF07969 Amidohydrolase family 86 564 5.7E-101 T 14-10-2018 IPR013108 Amidohydrolase 3 AMBLS11_15800 05d9d39cf82c1544e6480047001f123e 566 SUPERFAMILY SSF51556 96 524 1.64E-37 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_15800 05d9d39cf82c1544e6480047001f123e 566 Gene3D G3DSA:2.30.40.10 62 541 1.3E-141 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_15800 05d9d39cf82c1544e6480047001f123e 566 SUPERFAMILY SSF51338 48 565 1.69E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_08980 c8334505d8a3a3fdbdc9082745789cc7 493 Pfam PF07690 Major Facilitator Superfamily 302 484 1.2E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_08980 c8334505d8a3a3fdbdc9082745789cc7 493 Pfam PF13347 MFS/sugar transport protein 42 217 3.1E-19 T 14-10-2018 AMBLS11_08980 c8334505d8a3a3fdbdc9082745789cc7 493 Gene3D G3DSA:1.20.1250.20 297 493 8.6E-18 T 14-10-2018 AMBLS11_08980 c8334505d8a3a3fdbdc9082745789cc7 493 ProSitePatterns PS00216 Sugar transport proteins signature 1. 339 355 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMBLS11_08980 c8334505d8a3a3fdbdc9082745789cc7 493 SUPERFAMILY SSF103473 11 485 1.31E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_08980 c8334505d8a3a3fdbdc9082745789cc7 493 Gene3D G3DSA:1.20.1250.20 10 218 5.2E-18 T 14-10-2018 AMBLS11_00390 5d2f2e4c2049f5b745726a9f7c9831c6 456 SUPERFAMILY SSF52540 8 430 7.1E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00390 5d2f2e4c2049f5b745726a9f7c9831c6 456 Pfam PF13245 AAA domain 21 238 1.3E-8 T 14-10-2018 AMBLS11_00390 5d2f2e4c2049f5b745726a9f7c9831c6 456 Gene3D G3DSA:3.40.50.300 264 445 3.3E-15 T 14-10-2018 AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 Gene3D G3DSA:3.30.160.20 155 226 1.2E-17 T 14-10-2018 AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 ProSitePatterns PS00517 Ribonuclease III family signature. 39 47 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 SUPERFAMILY SSF54768 111 224 1.82E-24 T 14-10-2018 AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 221 30.0 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 SMART SM00358 157 225 1.2E-15 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 SMART SM00535 22 150 1.4E-55 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 Gene3D G3DSA:1.10.1520.10 5 153 5.0E-46 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 SUPERFAMILY SSF69065 7 158 2.44E-48 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 Pfam PF00035 Double-stranded RNA binding motif 157 224 2.3E-11 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 Pfam PF14622 Ribonuclease-III-like 20 139 1.6E-33 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMBLS11_12260 1b3e5784c54a6bc83839c1a67b22a3f5 228 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 11 224 7.4E-74 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AMBLS11_18710 c9bec00bfe39c5eaaeb71a01ede7622f 1300 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 914 1255 9.6E-49 T 14-10-2018 IPR007452 Translocation and assembly module TamB AMBLS11_08610 f36ea62b58eb703f60c9e22628a5d948 504 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site AMBLS11_08610 f36ea62b58eb703f60c9e22628a5d948 504 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 498 1.3E-196 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AMBLS11_08610 f36ea62b58eb703f60c9e22628a5d948 504 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 437 7.3E-86 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_08610 f36ea62b58eb703f60c9e22628a5d948 504 Pfam PF00474 Sodium:solute symporter family 34 437 4.2E-90 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_08610 f36ea62b58eb703f60c9e22628a5d948 504 Gene3D G3DSA:1.20.1730.10 12 503 1.2E-79 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMBLS11_10315 f87caa91d810b005aa023eac3d17df77 122 SUPERFAMILY SSF142906 1 118 4.45E-28 T 14-10-2018 IPR038056 YjbR-like superfamily AMBLS11_10315 f87caa91d810b005aa023eac3d17df77 122 Gene3D G3DSA:3.90.1150.30 1 120 6.8E-10 T 14-10-2018 IPR038056 YjbR-like superfamily AMBLS11_10315 f87caa91d810b005aa023eac3d17df77 122 Pfam PF04237 YjbR 12 103 2.2E-12 T 14-10-2018 IPR007351 Uncharacterised protein YjbR AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 SMART SM00116 139 187 0.037 T 14-10-2018 IPR000644 CBS domain AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 SMART SM00116 76 125 1.5 T 14-10-2018 IPR000644 CBS domain AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 SMART SM01091 205 283 4.7E-24 T 14-10-2018 IPR005170 Transporter-associated domain AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 Gene3D G3DSA:3.30.465.10 196 281 2.3E-25 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 Gene3D G3DSA:3.10.580.10 46 195 1.1E-53 T 14-10-2018 AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 Pfam PF03471 Transporter associated domain 208 281 4.0E-19 T 14-10-2018 IPR005170 Transporter-associated domain AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 SUPERFAMILY SSF54631 63 200 3.54E-35 T 14-10-2018 AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 SUPERFAMILY SSF56176 203 282 1.85E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 Pfam PF00571 CBS domain 67 123 1.3E-6 T 14-10-2018 IPR000644 CBS domain AMBLS11_06760 581b088484e8bf1cf915465e1bd07dc8 285 Pfam PF00571 CBS domain 136 187 1.9E-6 T 14-10-2018 IPR000644 CBS domain AMBLS11_10685 75cd7b93e39563037119685162048b1f 168 SUPERFAMILY SSF53218 5 164 5.23E-46 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMBLS11_10685 75cd7b93e39563037119685162048b1f 168 Pfam PF00994 Probable molybdopterin binding domain 11 152 5.5E-34 T 14-10-2018 IPR001453 MoaB/Mog domain AMBLS11_10685 75cd7b93e39563037119685162048b1f 168 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AMBLS11_10685 75cd7b93e39563037119685162048b1f 168 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 9 148 1.5E-35 T 14-10-2018 IPR001453 MoaB/Mog domain AMBLS11_10685 75cd7b93e39563037119685162048b1f 168 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 6 165 1.1E-81 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AMBLS11_10685 75cd7b93e39563037119685162048b1f 168 SMART SM00852 11 155 6.5E-29 T 14-10-2018 IPR001453 MoaB/Mog domain AMBLS11_10685 75cd7b93e39563037119685162048b1f 168 PIRSF PIRSF006443 2 163 1.6E-63 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AMBLS11_10685 75cd7b93e39563037119685162048b1f 168 Gene3D G3DSA:3.40.980.10 2 168 1.4E-50 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMBLS11_08770 b4017bcf53bea4ee1965909e261ef5b8 300 SUPERFAMILY SSF48452 36 289 5.87E-67 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_08770 b4017bcf53bea4ee1965909e261ef5b8 300 PIRSF PIRSF004654 1 299 7.4E-106 T 14-10-2018 IPR023605 Lipoprotein NlpI AMBLS11_08770 b4017bcf53bea4ee1965909e261ef5b8 300 Pfam PF13181 Tetratricopeptide repeat 69 101 0.03 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08770 b4017bcf53bea4ee1965909e261ef5b8 300 SMART SM00028 103 136 8.2E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08770 b4017bcf53bea4ee1965909e261ef5b8 300 SMART SM00028 241 274 44.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08770 b4017bcf53bea4ee1965909e261ef5b8 300 SMART SM00028 137 170 490.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08770 b4017bcf53bea4ee1965909e261ef5b8 300 SMART SM00028 69 102 1.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08770 b4017bcf53bea4ee1965909e261ef5b8 300 Gene3D G3DSA:1.25.40.10 29 298 4.6E-77 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Gene3D G3DSA:3.40.50.10190 591 676 1.0E-24 T 14-10-2018 IPR036420 BRCT domain superfamily AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 328 404 6.1E-35 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Gene3D G3DSA:1.10.150.20 438 511 1.2E-28 T 14-10-2018 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SMART SM00278 550 569 80.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SMART SM00278 486 505 230.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SMART SM00278 452 471 760.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SMART SM00278 518 537 200.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Pfam PF12826 Helix-hairpin-helix motif 516 579 2.4E-23 T 14-10-2018 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SUPERFAMILY SSF52113 598 674 1.08E-17 T 14-10-2018 IPR036420 BRCT domain superfamily AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 15 668 9.2E-261 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Gene3D G3DSA:2.20.70.80 397 437 6.6E-17 T 14-10-2018 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 337 352 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SMART SM00532 7 454 1.5E-269 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Gene3D G3DSA:2.40.50.140 324 396 1.3E-34 T 14-10-2018 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 119 148 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Hamap MF_01588 DNA ligase [ligA]. 6 673 53.217 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SUPERFAMILY SSF56091 5 322 1.22E-117 T 14-10-2018 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Gene3D G3DSA:1.10.287.610 4 74 5.4E-25 T 14-10-2018 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Gene3D G3DSA:1.10.150.20 512 590 4.5E-30 T 14-10-2018 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 667 3.5E-10 T 14-10-2018 IPR001357 BRCT domain AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 413 440 4.8E-10 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 PIRSF PIRSF001604 1 678 1.6E-251 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Gene3D G3DSA:3.30.470.90 75 323 7.1E-98 T 14-10-2018 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 324 2.9E-128 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SUPERFAMILY SSF50249 324 405 3.94E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SMART SM00292 599 676 9.2E-10 T 14-10-2018 IPR001357 BRCT domain AMBLS11_08795 4ed4d923ec8c443bb5229601d35de364 678 SUPERFAMILY SSF47781 410 589 7.78E-60 T 14-10-2018 IPR010994 RuvA domain 2-like AMBLS11_14225 0bdc636e7fe518e7660a9e217bbe8c6f 273 Gene3D G3DSA:1.10.3730.10 166 273 9.8E-32 T 14-10-2018 AMBLS11_14225 0bdc636e7fe518e7660a9e217bbe8c6f 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 4.6E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMBLS11_14225 0bdc636e7fe518e7660a9e217bbe8c6f 273 SUPERFAMILY SSF48179 164 272 7.65E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_14225 0bdc636e7fe518e7660a9e217bbe8c6f 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 1.0E-20 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMBLS11_14225 0bdc636e7fe518e7660a9e217bbe8c6f 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 1.5E-28 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMBLS11_14225 0bdc636e7fe518e7660a9e217bbe8c6f 273 PIRSF PIRSF000193 3 272 9.2E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMBLS11_14225 0bdc636e7fe518e7660a9e217bbe8c6f 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.526 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMBLS11_14225 0bdc636e7fe518e7660a9e217bbe8c6f 273 SUPERFAMILY SSF51735 4 162 3.17E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_14225 0bdc636e7fe518e7660a9e217bbe8c6f 273 Gene3D G3DSA:3.40.50.720 1 165 6.8E-50 T 14-10-2018 AMBLS11_11240 17dce0a339715958a93a960204728372 321 Gene3D G3DSA:1.10.10.10 20 104 6.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11240 17dce0a339715958a93a960204728372 321 SUPERFAMILY SSF46785 22 101 2.25E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_11240 17dce0a339715958a93a960204728372 321 Pfam PF03466 LysR substrate binding domain 108 302 1.2E-22 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_11240 17dce0a339715958a93a960204728372 321 Gene3D G3DSA:3.40.190.10 180 284 3.3E-17 T 14-10-2018 AMBLS11_11240 17dce0a339715958a93a960204728372 321 SUPERFAMILY SSF53850 106 310 1.32E-22 T 14-10-2018 AMBLS11_11240 17dce0a339715958a93a960204728372 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 59 3.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11240 17dce0a339715958a93a960204728372 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 59 70 3.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11240 17dce0a339715958a93a960204728372 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 3.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11240 17dce0a339715958a93a960204728372 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 79 7.7E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11240 17dce0a339715958a93a960204728372 321 Gene3D G3DSA:3.40.190.10 137 297 3.3E-17 T 14-10-2018 AMBLS11_16155 a91647476057767af7e12615452d8115 538 PIRSF PIRSF038928 23 507 1.3E-176 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 PRINTS PR00067 Catalase signature 314 341 6.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 PRINTS PR00067 Catalase signature 346 372 6.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 PRINTS PR00067 Catalase signature 108 126 6.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 PRINTS PR00067 Catalase signature 129 146 6.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 PRINTS PR00067 Catalase signature 45 68 6.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 PRINTS PR00067 Catalase signature 148 166 6.5E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 ProSitePatterns PS00438 Catalase proximal active site signature. 68 84 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 Gene3D G3DSA:2.40.180.10 28 517 8.2E-197 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMBLS11_16155 a91647476057767af7e12615452d8115 538 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 359 367 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 SUPERFAMILY SSF56634 27 509 6.8E-183 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 Pfam PF06628 Catalase-related immune-responsive 441 499 8.8E-16 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 Pfam PF00199 Catalase 32 412 6.8E-165 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_16155 a91647476057767af7e12615452d8115 538 SMART SM01060 32 417 1.6E-231 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 SMART SM00388 218 281 1.0E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 Pfam PF00072 Response regulator receiver domain 592 700 1.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 Pfam PF00072 Response regulator receiver domain 461 566 1.1E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 Gene3D G3DSA:3.30.565.10 280 445 1.3E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 SMART SM00448 590 702 2.4E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 SMART SM00448 457 569 0.0022 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 281 1.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 440 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 SUPERFAMILY SSF52172 588 706 1.71E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 440 1.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 SMART SM00387 328 443 1.6E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 29 92 3.5E-12 T 14-10-2018 IPR029095 NarX-like, N-terminal AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 Gene3D G3DSA:3.40.50.12740 589 706 6.3E-39 T 14-10-2018 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 Gene3D G3DSA:1.10.287.130 186 279 3.2E-22 T 14-10-2018 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 Gene3D G3DSA:3.40.50.2300 455 588 5.7E-15 T 14-10-2018 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 SUPERFAMILY SSF47384 207 282 1.55E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 SUPERFAMILY SSF52172 456 573 1.42E-14 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_11200 aa0d0abe810a9149ffb7f34cca79712a 707 SUPERFAMILY SSF55874 270 439 3.14E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_05690 aed7676bfaf4c273d3c772f2b25c3a7e 472 Gene3D G3DSA:3.40.630.10 53 456 4.4E-137 T 14-10-2018 AMBLS11_05690 aed7676bfaf4c273d3c772f2b25c3a7e 472 Gene3D G3DSA:3.50.30.30 106 256 4.4E-137 T 14-10-2018 AMBLS11_05690 aed7676bfaf4c273d3c772f2b25c3a7e 472 Pfam PF04389 Peptidase family M28 267 452 1.3E-26 T 14-10-2018 IPR007484 Peptidase M28 AMBLS11_05690 aed7676bfaf4c273d3c772f2b25c3a7e 472 SUPERFAMILY SSF53187 224 463 6.56E-54 T 14-10-2018 AMBLS11_05690 aed7676bfaf4c273d3c772f2b25c3a7e 472 Pfam PF02225 PA domain 152 239 3.6E-5 T 14-10-2018 IPR003137 PA domain AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 8.1E-51 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.1E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 SUPERFAMILY SSF47729 3 93 6.77E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 Gene3D G3DSA:4.10.520.10 1 99 4.6E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.612 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 SMART SM00411 3 92 3.7E-42 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_07500 28ad9705c5dc3386313f2645ad7e52b7 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_18070 02157f732d52f30ec3148cf3ac0cd232 146 SUPERFAMILY SSF52304 1 143 6.02E-63 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMBLS11_18070 02157f732d52f30ec3148cf3ac0cd232 146 Pfam PF01220 Dehydroquinase class II 2 138 1.2E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMBLS11_18070 02157f732d52f30ec3148cf3ac0cd232 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 72.23 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMBLS11_18070 02157f732d52f30ec3148cf3ac0cd232 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMBLS11_18070 02157f732d52f30ec3148cf3ac0cd232 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 140 3.4E-64 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMBLS11_18070 02157f732d52f30ec3148cf3ac0cd232 146 Gene3D G3DSA:3.40.50.9100 1 145 2.5E-66 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMBLS11_18070 02157f732d52f30ec3148cf3ac0cd232 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 16 140 8.0E-48 T 14-10-2018 AMBLS11_18070 02157f732d52f30ec3148cf3ac0cd232 146 PIRSF PIRSF001399 1 145 4.7E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMBLS11_05930 941f08e28a6c6ef12c2ae431749e743f 130 Gene3D G3DSA:1.10.3680.10 1 121 2.0E-6 T 14-10-2018 IPR029024 TerB-like AMBLS11_05930 941f08e28a6c6ef12c2ae431749e743f 130 SUPERFAMILY SSF158682 5 117 1.57E-10 T 14-10-2018 IPR029024 TerB-like AMBLS11_05930 941f08e28a6c6ef12c2ae431749e743f 130 Pfam PF05099 Tellurite resistance protein TerB 7 112 3.2E-6 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 SUPERFAMILY SSF54373 294 477 1.08E-54 T 14-10-2018 AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 Gene3D G3DSA:3.50.50.60 8 533 3.4E-182 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 Gene3D G3DSA:3.30.410.40 155 474 3.4E-182 T 14-10-2018 AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 PIRSF PIRSF000137 2 544 7.5E-155 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 Pfam PF00732 GMC oxidoreductase 8 299 4.2E-90 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 258 272 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 SUPERFAMILY SSF51905 7 537 3.89E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 Gene3D G3DSA:1.10.1220.110 100 154 3.4E-182 T 14-10-2018 AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 Pfam PF05199 GMC oxidoreductase 391 529 1.1E-44 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_11630 d42f80388cd7023f4b4bce8842a922fa 550 Gene3D G3DSA:4.10.450.10 41 200 3.4E-182 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 SMART SM01005 232 356 5.6E-70 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 2.9E-46 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 PRINTS PR00992 Alanine racemase signature 286 303 8.0E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 PRINTS PR00992 Alanine racemase signature 27 43 8.0E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 PRINTS PR00992 Alanine racemase signature 338 351 8.0E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 PRINTS PR00992 Alanine racemase signature 155 166 8.0E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 PRINTS PR00992 Alanine racemase signature 192 219 8.0E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 PRINTS PR00992 Alanine racemase signature 122 134 8.0E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 PRINTS PR00992 Alanine racemase signature 248 263 8.0E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 PRINTS PR00992 Alanine racemase signature 62 80 8.0E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 PRINTS PR00992 Alanine racemase signature 265 280 8.0E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 Gene3D G3DSA:3.20.20.10 11 217 1.1E-120 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 4.5E-57 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 Gene3D G3DSA:2.40.37.10 9 351 1.1E-120 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 SUPERFAMILY SSF51419 9 233 8.64E-58 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 Hamap MF_01201 Alanine racemase. 2 356 32.461 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 SUPERFAMILY SSF50621 225 355 3.35E-49 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 TIGRFAM TIGR00492 alr: alanine racemase 3 354 6.1E-103 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02455 4026b2e71e7eaf6cc79c508ee7cd3118 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_02925 c3e796760eabbced1ddf196c616bb0f1 410 PIRSF PIRSF037565 1 410 7.0E-133 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AMBLS11_02925 c3e796760eabbced1ddf196c616bb0f1 410 Gene3D G3DSA:3.40.50.150 8 209 1.2E-53 T 14-10-2018 AMBLS11_02925 c3e796760eabbced1ddf196c616bb0f1 410 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 338 344 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMBLS11_02925 c3e796760eabbced1ddf196c616bb0f1 410 Pfam PF05175 Methyltransferase small domain 231 405 5.5E-46 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMBLS11_02925 c3e796760eabbced1ddf196c616bb0f1 410 SUPERFAMILY SSF53335 232 393 2.18E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_02925 c3e796760eabbced1ddf196c616bb0f1 410 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 409 47.087 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AMBLS11_02925 c3e796760eabbced1ddf196c616bb0f1 410 Gene3D G3DSA:3.40.50.150 218 410 8.5E-45 T 14-10-2018 AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 SMART SM00387 262 368 2.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 346 2.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 313 2.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 327 2.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 365 2.1E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 Gene3D G3DSA:3.30.450.20 38 140 1.1E-6 T 14-10-2018 AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 SUPERFAMILY SSF55785 48 131 9.52E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 SUPERFAMILY SSF47384 143 218 7.46E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 266 365 1.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 SMART SM00388 153 219 1.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 Gene3D G3DSA:3.30.565.10 221 375 1.9E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 Pfam PF13188 PAS domain 47 101 4.7E-6 T 14-10-2018 IPR000014 PAS domain AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 Pfam PF00512 His Kinase A (phospho-acceptor) domain 153 218 3.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 SUPERFAMILY SSF55874 208 367 3.8E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_04940 eaab3269dcb072eb75d2df06c35da031 380 Gene3D G3DSA:1.10.287.130 141 216 1.9E-13 T 14-10-2018 AMBLS11_07315 de1d304bcf6f476649b88b176975d934 144 SUPERFAMILY SSF55200 56 144 6.28E-35 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AMBLS11_07315 de1d304bcf6f476649b88b176975d934 144 Gene3D G3DSA:3.10.20.80 1 48 1.7E-20 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMBLS11_07315 de1d304bcf6f476649b88b176975d934 144 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 56 142 1.5E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AMBLS11_07315 de1d304bcf6f476649b88b176975d934 144 ProSitePatterns PS00938 Initiation factor 3 signature. 31 44 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AMBLS11_07315 de1d304bcf6f476649b88b176975d934 144 SUPERFAMILY SSF54364 1 51 6.02E-19 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMBLS11_07315 de1d304bcf6f476649b88b176975d934 144 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 144 22.781 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMBLS11_07315 de1d304bcf6f476649b88b176975d934 144 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 49 1.2E-19 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMBLS11_07315 de1d304bcf6f476649b88b176975d934 144 Gene3D G3DSA:3.30.110.10 49 144 4.6E-40 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AMBLS11_07315 de1d304bcf6f476649b88b176975d934 144 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 144 2.6E-63 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 Pfam PF00310 Glutamine amidotransferases class-II 13 426 1.4E-173 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 Gene3D G3DSA:2.160.20.60 1196 1470 1.4E-98 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 SUPERFAMILY SSF69336 1215 1466 1.26E-85 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 Pfam PF04898 Glutamate synthase central domain 460 738 9.2E-102 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 Pfam PF01493 GXGXG motif 1237 1423 1.4E-76 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 Pfam PF01645 Conserved region in glutamate synthase 794 1157 3.1E-151 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 SUPERFAMILY SSF51395 435 1194 3.66E-248 T 14-10-2018 AMBLS11_14615 a2a907765b8a9ea04e226f5f69d19ed7 1488 SUPERFAMILY SSF56235 13 429 1.9E-148 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_05630 add47939007fb30887dc7a5892d85b17 210 Pfam PF08281 Sigma-70, region 4 136 183 4.6E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_05630 add47939007fb30887dc7a5892d85b17 210 SUPERFAMILY SSF88946 31 110 6.67E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05630 add47939007fb30887dc7a5892d85b17 210 Gene3D G3DSA:1.10.1740.10 23 109 9.4E-9 T 14-10-2018 AMBLS11_05630 add47939007fb30887dc7a5892d85b17 210 Gene3D G3DSA:1.10.10.10 114 191 5.1E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05630 add47939007fb30887dc7a5892d85b17 210 Pfam PF04542 Sigma-70 region 2 36 97 3.2E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05630 add47939007fb30887dc7a5892d85b17 210 SUPERFAMILY SSF88659 124 187 3.49E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_05630 add47939007fb30887dc7a5892d85b17 210 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 185 9.1E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_03095 d34613d733b3b914b10ece0de26774d2 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 266 4.5E-31 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_03095 d34613d733b3b914b10ece0de26774d2 349 Gene3D G3DSA:2.40.30.170 53 276 2.4E-73 T 14-10-2018 AMBLS11_03095 d34613d733b3b914b10ece0de26774d2 349 Gene3D G3DSA:2.40.420.20 277 344 2.4E-73 T 14-10-2018 AMBLS11_03095 d34613d733b3b914b10ece0de26774d2 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 346 2.4E-79 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_03095 d34613d733b3b914b10ece0de26774d2 349 Gene3D G3DSA:2.40.50.100 66 194 2.4E-73 T 14-10-2018 AMBLS11_03095 d34613d733b3b914b10ece0de26774d2 349 Gene3D G3DSA:1.10.287.470 101 160 2.4E-73 T 14-10-2018 AMBLS11_03095 d34613d733b3b914b10ece0de26774d2 349 SUPERFAMILY SSF111369 55 272 6.15E-43 T 14-10-2018 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.0E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.0E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.0E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.0E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 Gene3D G3DSA:1.10.150.300 113 200 1.0E-152 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.6E-168 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.833 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.5E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 Gene3D G3DSA:3.10.20.30 48 361 1.0E-152 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 SUPERFAMILY SSF81271 279 363 1.92E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.2E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 Gene3D G3DSA:3.40.50.300 4 278 1.0E-152 T 14-10-2018 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 PIRSF PIRSF006641 1 363 9.4E-158 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMBLS11_06850 9d887487bb22036a063deed82a48afe4 363 SUPERFAMILY SSF52540 3 301 1.4E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09565 5e0f06905bf3e8b94aaaa96ac3d376ea 341 Gene3D G3DSA:3.40.1090.10 84 212 2.1E-15 T 14-10-2018 AMBLS11_09565 5e0f06905bf3e8b94aaaa96ac3d376ea 341 Gene3D G3DSA:3.40.1090.20 1 69 1.4E-7 T 14-10-2018 AMBLS11_09565 5e0f06905bf3e8b94aaaa96ac3d376ea 341 SUPERFAMILY SSF52151 1 326 3.84E-50 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMBLS11_09565 5e0f06905bf3e8b94aaaa96ac3d376ea 341 Pfam PF01734 Patatin-like phospholipase 5 52 1.1E-7 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMBLS11_09565 5e0f06905bf3e8b94aaaa96ac3d376ea 341 Pfam PF01734 Patatin-like phospholipase 118 162 4.8E-7 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMBLS11_02275 b1c7c01c5fa06f59a0c49dd5131e6540 79 Pfam PF02416 mttA/Hcf106 family 4 56 1.3E-14 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMBLS11_02275 b1c7c01c5fa06f59a0c49dd5131e6540 79 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 78 24.934 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMBLS11_02275 b1c7c01c5fa06f59a0c49dd5131e6540 79 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.4E-20 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMBLS11_14300 09e39f6695b396e9647796265a4608c5 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 7.0E-94 T 14-10-2018 IPR005583 Peroxide stress protein YaaA AMBLS11_14300 09e39f6695b396e9647796265a4608c5 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.795 T 14-10-2018 IPR005583 Peroxide stress protein YaaA AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 Gene3D G3DSA:3.30.70.260 621 703 4.7E-14 T 14-10-2018 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 Pfam PF13291 ACT domain 620 697 4.7E-16 T 14-10-2018 IPR002912 ACT domain AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 SUPERFAMILY SSF81271 375 448 2.83E-19 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 696 2.6E-255 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 SUPERFAMILY SSF81301 181 392 4.9E-60 T 14-10-2018 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 Gene3D G3DSA:1.10.3210.10 3 190 1.3E-80 T 14-10-2018 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 Pfam PF02824 TGS domain 388 447 5.0E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 SMART SM00471 41 153 2.9E-9 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 Gene3D G3DSA:3.10.20.30 381 456 6.9E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 3.2E-35 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 Gene3D G3DSA:3.30.460.10 193 325 1.5E-46 T 14-10-2018 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 Pfam PF13328 HD domain 26 175 4.4E-53 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 SUPERFAMILY SSF55021 623 699 7.5E-9 T 14-10-2018 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 SMART SM00954 235 345 3.0E-61 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMBLS11_00540 a124571a4b6214dbe2906a658fb918f6 703 SUPERFAMILY SSF109604 3 190 2.79E-74 T 14-10-2018 AMBLS11_12090 0195af80a54eb23c5996bd7b230b12f0 327 SMART SM00363 21 86 1.1E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_12090 0195af80a54eb23c5996bd7b230b12f0 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_12090 0195af80a54eb23c5996bd7b230b12f0 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 315 9.0E-106 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_12090 0195af80a54eb23c5996bd7b230b12f0 327 Pfam PF01479 S4 domain 22 61 5.1E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_12090 0195af80a54eb23c5996bd7b230b12f0 327 Gene3D G3DSA:3.10.290.10 6 77 2.7E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMBLS11_12090 0195af80a54eb23c5996bd7b230b12f0 327 Pfam PF00849 RNA pseudouridylate synthase 95 245 6.3E-33 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_12090 0195af80a54eb23c5996bd7b230b12f0 327 Gene3D G3DSA:3.30.2350.10 87 319 2.2E-74 T 14-10-2018 AMBLS11_12090 0195af80a54eb23c5996bd7b230b12f0 327 SUPERFAMILY SSF55174 21 73 3.03E-10 T 14-10-2018 AMBLS11_12090 0195af80a54eb23c5996bd7b230b12f0 327 SUPERFAMILY SSF55120 82 320 5.14E-81 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 979 5.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 PRINTS PR00344 Bacterial sensor protein C-terminal signature 948 958 5.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 998 5.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 PRINTS PR00344 Bacterial sensor protein C-terminal signature 930 944 5.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 SMART SM00387 893 1001 6.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 SUPERFAMILY SSF52172 1020 1150 7.26E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 Gene3D G3DSA:2.130.10.10 42 279 1.1E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 SUPERFAMILY SSF47384 778 841 7.26E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 Pfam PF00512 His Kinase A (phospho-acceptor) domain 787 841 3.0E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 Pfam PF12833 Helix-turn-helix domain 1197 1273 4.7E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1227 1268 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 SUPERFAMILY SSF63829 99 276 6.54E-6 T 14-10-2018 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 Gene3D G3DSA:1.10.287.130 776 843 6.1E-10 T 14-10-2018 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 SUPERFAMILY SSF55874 867 1000 1.57E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 Gene3D G3DSA:3.40.50.2300 1007 1153 4.5E-30 T 14-10-2018 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 Pfam PF00072 Response regulator receiver domain 1025 1134 1.4E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 SMART SM00448 1022 1134 1.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 Gene3D G3DSA:3.30.565.10 861 1006 5.0E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 SUPERFAMILY SSF46689 1227 1275 1.21E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 896 999 1.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 SMART SM00342 1190 1272 8.9E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_01630 5bf161df055b764e9c83156e1d89989b 1280 Gene3D G3DSA:1.10.10.60 1176 1273 2.8E-15 T 14-10-2018 AMBLS11_11745 b5d7af90f4e0de5fa7b626468d675f4b 238 Gene3D G3DSA:3.30.420.40 94 195 1.9E-70 T 14-10-2018 AMBLS11_11745 b5d7af90f4e0de5fa7b626468d675f4b 238 Gene3D G3DSA:3.30.420.40 3 229 1.9E-70 T 14-10-2018 AMBLS11_11745 b5d7af90f4e0de5fa7b626468d675f4b 238 SUPERFAMILY SSF53067 1 100 1.51E-28 T 14-10-2018 AMBLS11_11745 b5d7af90f4e0de5fa7b626468d675f4b 238 Pfam PF00814 Glycoprotease family 28 193 1.7E-26 T 14-10-2018 IPR000905 Gcp-like domain AMBLS11_11745 b5d7af90f4e0de5fa7b626468d675f4b 238 SUPERFAMILY SSF53067 112 224 8.8E-18 T 14-10-2018 AMBLS11_11745 b5d7af90f4e0de5fa7b626468d675f4b 238 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 226 3.1E-61 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AMBLS11_11310 f7f25da2449608849a89ff5138155fae 478 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 49 475 3.7E-74 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMBLS11_11310 f7f25da2449608849a89ff5138155fae 478 Pfam PF00939 Sodium:sulfate symporter transmembrane region 48 470 8.5E-61 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMBLS11_17840 6bcaedb047cdd30031cd8462fdce31c8 385 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 178 203 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AMBLS11_17840 6bcaedb047cdd30031cd8462fdce31c8 385 Gene3D G3DSA:3.40.50.720 17 372 2.8E-127 T 14-10-2018 AMBLS11_17840 6bcaedb047cdd30031cd8462fdce31c8 385 Gene3D G3DSA:3.40.50.720 145 325 2.8E-127 T 14-10-2018 AMBLS11_17840 6bcaedb047cdd30031cd8462fdce31c8 385 SUPERFAMILY SSF51735 145 322 9.72E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_17840 6bcaedb047cdd30031cd8462fdce31c8 385 SMART SM01002 154 318 8.2E-74 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMBLS11_17840 6bcaedb047cdd30031cd8462fdce31c8 385 SUPERFAMILY SSF52283 14 176 2.72E-41 T 14-10-2018 AMBLS11_17840 6bcaedb047cdd30031cd8462fdce31c8 385 SMART SM01003 4 145 7.3E-48 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMBLS11_17840 6bcaedb047cdd30031cd8462fdce31c8 385 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 150 375 3.4E-63 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMBLS11_17840 6bcaedb047cdd30031cd8462fdce31c8 385 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 16 145 2.2E-36 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 SMART SM00421 146 203 1.0E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 SUPERFAMILY SSF46894 142 211 4.42E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 Gene3D G3DSA:3.40.50.12740 2 209 3.5E-59 T 14-10-2018 AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.9E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.9E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.9E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 SMART SM00448 2 115 8.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 SUPERFAMILY SSF52172 2 131 3.56E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 Pfam PF00072 Response regulator receiver domain 4 115 1.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_09710 7a8c05a76454c6fa3e9617eabcd5e48c 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 8.9E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_07930 8c34093ca64fc24c63b5867e5fb8ce29 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMBLS11_07930 8c34093ca64fc24c63b5867e5fb8ce29 260 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 3.5E-88 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AMBLS11_07930 8c34093ca64fc24c63b5867e5fb8ce29 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMBLS11_07930 8c34093ca64fc24c63b5867e5fb8ce29 260 SUPERFAMILY SSF51556 2 253 9.71E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_07930 8c34093ca64fc24c63b5867e5fb8ce29 260 PIRSF PIRSF005902 1 256 9.0E-83 T 14-10-2018 IPR001130 TatD family GO:0016788 AMBLS11_07930 8c34093ca64fc24c63b5867e5fb8ce29 260 Pfam PF01026 TatD related DNase 3 252 1.1E-75 T 14-10-2018 IPR001130 TatD family GO:0016788 AMBLS11_07930 8c34093ca64fc24c63b5867e5fb8ce29 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMBLS11_07930 8c34093ca64fc24c63b5867e5fb8ce29 260 Gene3D G3DSA:3.20.20.140 1 259 2.1E-93 T 14-10-2018 AMBLS11_13825 c43c1f6b4774cefd688e7822cdb82a96 566 Gene3D G3DSA:3.40.630.10 84 513 3.7E-46 T 14-10-2018 AMBLS11_13825 c43c1f6b4774cefd688e7822cdb82a96 566 Gene3D G3DSA:3.50.30.30 124 315 3.7E-46 T 14-10-2018 AMBLS11_13825 c43c1f6b4774cefd688e7822cdb82a96 566 Pfam PF02225 PA domain 158 250 1.8E-6 T 14-10-2018 IPR003137 PA domain AMBLS11_13825 c43c1f6b4774cefd688e7822cdb82a96 566 SUPERFAMILY SSF52025 157 239 6.15E-5 T 14-10-2018 AMBLS11_13825 c43c1f6b4774cefd688e7822cdb82a96 566 Pfam PF04389 Peptidase family M28 324 514 3.1E-42 T 14-10-2018 IPR007484 Peptidase M28 AMBLS11_13825 c43c1f6b4774cefd688e7822cdb82a96 566 SUPERFAMILY SSF53187 59 542 2.38E-61 T 14-10-2018 AMBLS11_16890 10c1793d3ec64d0aa344af506f0628b9 360 SMART SM00116 203 253 43.0 T 14-10-2018 IPR000644 CBS domain AMBLS11_16890 10c1793d3ec64d0aa344af506f0628b9 360 SMART SM00116 267 315 0.012 T 14-10-2018 IPR000644 CBS domain AMBLS11_16890 10c1793d3ec64d0aa344af506f0628b9 360 Pfam PF00571 CBS domain 266 315 2.1E-8 T 14-10-2018 IPR000644 CBS domain AMBLS11_16890 10c1793d3ec64d0aa344af506f0628b9 360 Gene3D G3DSA:3.10.580.10 174 327 4.4E-35 T 14-10-2018 AMBLS11_16890 10c1793d3ec64d0aa344af506f0628b9 360 Pfam PF01595 Domain of unknown function DUF21 8 177 2.3E-29 T 14-10-2018 IPR002550 CNNM, transmembrane domain AMBLS11_16890 10c1793d3ec64d0aa344af506f0628b9 360 SUPERFAMILY SSF54631 184 319 2.4E-25 T 14-10-2018 AMBLS11_18505 5bf7bdf7aef6458abef2c7f08a37d8a4 801 Pfam PF02927 Cellulase N-terminal ig-like domain 234 317 1.1E-5 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 AMBLS11_18505 5bf7bdf7aef6458abef2c7f08a37d8a4 801 Gene3D G3DSA:1.50.10.10 352 795 3.8E-26 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMBLS11_18505 5bf7bdf7aef6458abef2c7f08a37d8a4 801 SUPERFAMILY SSF81296 231 325 1.75E-11 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_18505 5bf7bdf7aef6458abef2c7f08a37d8a4 801 Pfam PF00759 Glycosyl hydrolase family 9 354 787 1.8E-17 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMBLS11_18505 5bf7bdf7aef6458abef2c7f08a37d8a4 801 SUPERFAMILY SSF48208 326 792 2.72E-50 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMBLS11_18505 5bf7bdf7aef6458abef2c7f08a37d8a4 801 Gene3D G3DSA:2.60.40.10 234 326 4.4E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Gene3D G3DSA:1.10.274.100 490 640 9.7E-41 T 14-10-2018 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.4E-87 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Gene3D G3DSA:2.40.50.100 948 1022 8.4E-28 T 14-10-2018 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1025 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.0E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 485 3.7E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 389 1.2E-7 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Gene3D G3DSA:1.10.132.30 641 790 1.4E-66 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Gene3D G3DSA:2.40.50.100 1023 1112 1.7E-10 T 14-10-2018 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1301 7.4E-78 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1361 18.994 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 SMART SM00663 235 514 2.3E-182 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 SUPERFAMILY SSF64484 16 1356 0.0 T 14-10-2018 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Gene3D G3DSA:2.40.50.100 1137 1200 1.6E-63 T 14-10-2018 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Gene3D G3DSA:1.10.40.90 374 416 8.9E-22 T 14-10-2018 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Gene3D G3DSA:1.10.1790.20 1121 1299 1.6E-63 T 14-10-2018 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Gene3D G3DSA:1.10.150.390 1301 1363 9.1E-29 T 14-10-2018 AMBLS11_17025 d6cf5090dc7e70ebffe18f76fbebde40 1390 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-29 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 Gene3D G3DSA:3.40.120.10 3 154 2.0E-47 T 14-10-2018 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 8.8E-14 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.5E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.5E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.5E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 46.602 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 Gene3D G3DSA:3.30.310.50 370 447 7.7E-24 T 14-10-2018 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 SUPERFAMILY SSF53738 258 365 5.49E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 Gene3D G3DSA:3.40.120.10 257 339 9.1E-61 T 14-10-2018 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 1.7E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 1.5E-42 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 SUPERFAMILY SSF53738 2 181 9.42E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.0E-186 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 SUPERFAMILY SSF55957 358 447 6.67E-22 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 SUPERFAMILY SSF53738 156 256 3.92E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 Gene3D G3DSA:3.40.120.10 175 362 9.1E-61 T 14-10-2018 AMBLS11_08545 8e17ed1576affb09fb6dfc775006d709 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 1.9E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_03620 0ab2361861e020c80a179c031bae0338 318 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 3.3E-80 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AMBLS11_03620 0ab2361861e020c80a179c031bae0338 318 Gene3D G3DSA:1.20.58.1130 8 205 7.5E-84 T 14-10-2018 AMBLS11_03620 0ab2361861e020c80a179c031bae0338 318 Pfam PF01699 Sodium/calcium exchanger protein 173 316 3.7E-30 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMBLS11_03620 0ab2361861e020c80a179c031bae0338 318 Pfam PF01699 Sodium/calcium exchanger protein 5 143 2.9E-28 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMBLS11_03620 0ab2361861e020c80a179c031bae0338 318 Gene3D G3DSA:1.20.1420.30 35 310 7.5E-84 T 14-10-2018 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 SUPERFAMILY SSF55486 35 606 1.69E-205 T 14-10-2018 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 Pfam PF01401 Angiotensin-converting enzyme 35 606 5.4E-210 T 14-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 Gene3D G3DSA:1.10.1370.30 347 602 4.4E-6 T 14-10-2018 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 340 365 1.2E-79 T 14-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 372 388 1.2E-79 T 14-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 502 530 1.2E-79 T 14-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 474 501 1.2E-79 T 14-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 439 464 1.2E-79 T 14-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 400 420 1.2E-79 T 14-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 263 284 1.2E-79 T 14-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMBLS11_07960 5caf7078510b435fe5ee3c5448b51d1c 606 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 228 255 1.2E-79 T 14-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMBLS11_09025 6be3d64505d4a74bbdd7814da0de50ef 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMBLS11_09025 6be3d64505d4a74bbdd7814da0de50ef 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 1.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_09025 6be3d64505d4a74bbdd7814da0de50ef 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 7.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_09025 6be3d64505d4a74bbdd7814da0de50ef 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 7.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_09025 6be3d64505d4a74bbdd7814da0de50ef 207 Gene3D G3DSA:1.10.357.10 2 207 3.4E-60 T 14-10-2018 AMBLS11_09025 6be3d64505d4a74bbdd7814da0de50ef 207 SUPERFAMILY SSF46689 3 76 9.23E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_09025 6be3d64505d4a74bbdd7814da0de50ef 207 SUPERFAMILY SSF48498 81 205 3.87E-40 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMBLS11_12605 d1d290fc4a143a6797dfe7fc2ad87dc6 212 PIRSF PIRSF004525 4 212 6.6E-31 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted AMBLS11_13395 a09c74285a383e6fecb3ab0c932711c4 158 Pfam PF00376 MerR family regulatory protein 8 44 3.6E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_13395 a09c74285a383e6fecb3ab0c932711c4 158 Pfam PF09278 MerR, DNA binding 49 114 5.4E-15 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding AMBLS11_13395 a09c74285a383e6fecb3ab0c932711c4 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 7.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_13395 a09c74285a383e6fecb3ab0c932711c4 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 7.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_13395 a09c74285a383e6fecb3ab0c932711c4 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 7.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_13395 a09c74285a383e6fecb3ab0c932711c4 158 Gene3D G3DSA:1.10.1660.10 2 130 8.5E-29 T 14-10-2018 AMBLS11_13395 a09c74285a383e6fecb3ab0c932711c4 158 SUPERFAMILY SSF46955 7 117 3.26E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_13395 a09c74285a383e6fecb3ab0c932711c4 158 SMART SM00422 7 75 7.8E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_13395 a09c74285a383e6fecb3ab0c932711c4 158 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 7 146 2.5E-50 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 SUPERFAMILY SSF51735 4 224 6.02E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.2E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.2E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.2E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 Gene3D G3DSA:3.40.50.720 1 227 1.8E-63 T 14-10-2018 AMBLS11_05675 ba4f4d65a54fa98e12bb2898833f2835 236 Pfam PF00106 short chain dehydrogenase 10 199 3.0E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Gene3D G3DSA:1.10.1420.10 257 548 5.4E-107 T 14-10-2018 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 863 24.693 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Gene3D G3DSA:3.30.420.110 118 253 3.9E-39 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Pfam PF05192 MutS domain III 260 548 5.1E-42 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 PIRSF PIRSF037677 1 834 1.2E-150 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Gene3D G3DSA:3.40.50.300 558 847 3.0E-98 T 14-10-2018 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Pfam PF05190 MutS family domain IV 417 505 6.4E-31 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 SUPERFAMILY SSF52540 556 787 2.22E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Pfam PF01624 MutS domain I 1 110 1.8E-40 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 SMART SM00534 596 783 1.1E-115 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 868 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 SUPERFAMILY SSF48334 258 554 9.81E-91 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 SUPERFAMILY SSF55271 1 106 1.29E-39 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 677 693 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Pfam PF05188 MutS domain II 119 244 1.2E-29 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Gene3D G3DSA:1.10.1420.10 376 492 5.4E-107 T 14-10-2018 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Pfam PF00488 MutS domain V 599 786 1.4E-85 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 Gene3D G3DSA:3.40.1170.10 1 112 1.5E-48 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 SUPERFAMILY SSF53150 105 257 3.4E-44 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AMBLS11_04265 4876be0ab51ca768be2413c3c5c591c1 873 SMART SM00533 274 580 1.1E-97 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 Pfam PF00285 Citrate synthase, C-terminal domain 45 410 5.0E-132 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 421 1.9E-228 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 PIRSF PIRSF001369 37 425 4.2E-167 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 Gene3D G3DSA:1.10.230.10 267 375 4.9E-146 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 PRINTS PR00143 Citrate synthase signature 295 315 1.6E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 PRINTS PR00143 Citrate synthase signature 378 392 1.6E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 PRINTS PR00143 Citrate synthase signature 358 374 1.6E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 PRINTS PR00143 Citrate synthase signature 164 177 1.6E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 PRINTS PR00143 Citrate synthase signature 218 233 1.6E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 PRINTS PR00143 Citrate synthase signature 240 268 1.6E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 SUPERFAMILY SSF48256 5 424 6.28E-164 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 Gene3D G3DSA:2.20.28.60 1 49 3.8E-23 T 14-10-2018 AMBLS11_08885 e4bccaaefd882569e9002cb9374f0c4e 425 Gene3D G3DSA:1.10.580.10 56 410 4.9E-146 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMBLS11_05760 1ad004248246d8d48e36f7730aa7342f 556 Gene3D G3DSA:3.60.20.10 2 193 5.0E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_05760 1ad004248246d8d48e36f7730aa7342f 556 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.4E-39 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMBLS11_05760 1ad004248246d8d48e36f7730aa7342f 556 PIRSF PIRSF001589 1 368 2.2E-108 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMBLS11_05760 1ad004248246d8d48e36f7730aa7342f 556 PIRSF PIRSF001589 363 515 8.4E-26 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMBLS11_05760 1ad004248246d8d48e36f7730aa7342f 556 Pfam PF00733 Asparagine synthase 211 366 4.0E-56 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AMBLS11_05760 1ad004248246d8d48e36f7730aa7342f 556 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 1.3E-117 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMBLS11_05760 1ad004248246d8d48e36f7730aa7342f 556 SUPERFAMILY SSF52402 208 482 1.44E-73 T 14-10-2018 AMBLS11_05760 1ad004248246d8d48e36f7730aa7342f 556 SUPERFAMILY SSF56235 1 196 2.92E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_05760 1ad004248246d8d48e36f7730aa7342f 556 Gene3D G3DSA:3.40.50.620 194 516 2.5E-114 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_14465 5e5ecf8922150c671b32020d8aea0890 400 SUPERFAMILY SSF51735 1 189 6.61E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_14465 5e5ecf8922150c671b32020d8aea0890 400 Gene3D G3DSA:3.40.50.720 5 388 1.9E-147 T 14-10-2018 AMBLS11_14465 5e5ecf8922150c671b32020d8aea0890 400 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 139 386 2.7E-38 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AMBLS11_14465 5e5ecf8922150c671b32020d8aea0890 400 Gene3D G3DSA:3.30.360.10 149 345 1.9E-147 T 14-10-2018 AMBLS11_14465 5e5ecf8922150c671b32020d8aea0890 400 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 135 1.7E-31 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 SUPERFAMILY SSF54534 282 383 6.54E-31 T 14-10-2018 AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 Pfam PF09312 SurA N-terminal domain 25 142 8.9E-38 T 14-10-2018 IPR015391 SurA N-terminal AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 Hamap MF_01183 Chaperone SurA [surA]. 4 427 34.882 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 320 341 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 SUPERFAMILY SSF109998 25 201 5.49E-39 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 Gene3D G3DSA:3.10.50.40 279 384 6.0E-79 T 14-10-2018 AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 Gene3D G3DSA:1.10.4030.10 21 148 1.2E-34 T 14-10-2018 AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 Gene3D G3DSA:3.10.50.40 175 278 6.0E-79 T 14-10-2018 AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 Pfam PF00639 PPIC-type PPIASE domain 178 271 2.4E-19 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 Pfam PF00639 PPIC-type PPIASE domain 288 381 6.7E-23 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AMBLS11_03365 e1fd812af789edaa03e1020111c08f86 427 SUPERFAMILY SSF54534 173 275 4.51E-26 T 14-10-2018 AMBLS11_01610 db54fd22ac279b0555b10750ad0fcac2 599 SMART SM00267 434 599 2.3E-4 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_01610 db54fd22ac279b0555b10750ad0fcac2 599 Pfam PF00990 Diguanylate cyclase, GGDEF domain 445 569 7.6E-16 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_01610 db54fd22ac279b0555b10750ad0fcac2 599 SUPERFAMILY SSF48452 172 376 4.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_01610 db54fd22ac279b0555b10750ad0fcac2 599 Gene3D G3DSA:3.30.70.270 445 592 1.8E-21 T 14-10-2018 AMBLS11_01610 db54fd22ac279b0555b10750ad0fcac2 599 SUPERFAMILY SSF55073 454 555 6.12E-17 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_01610 db54fd22ac279b0555b10750ad0fcac2 599 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 445 577 3.9E-15 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 Pfam PF02743 Cache domain 48 308 6.8E-19 T 14-10-2018 IPR033479 Double Cache domain 1 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 SMART SM00304 379 433 3.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 476 505 8.0E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 8.0E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 SMART SM00283 448 709 8.4E-60 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 Pfam PF00672 HAMP domain 379 429 6.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 Gene3D G3DSA:1.10.287.950 378 710 6.3E-65 T 14-10-2018 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 Gene3D G3DSA:3.30.450.20 61 297 1.6E-30 T 14-10-2018 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 Gene3D G3DSA:3.30.450.20 74 237 1.6E-30 T 14-10-2018 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 511 671 4.7E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_11885 23d80a86c25c3bdcb5df737c772fa650 711 SUPERFAMILY SSF58104 401 710 2.62E-67 T 14-10-2018 AMBLS11_09245 1e88b0d048a9c69781bc0eb4d679c42a 190 Gene3D G3DSA:3.90.79.10 7 187 1.1E-50 T 14-10-2018 AMBLS11_09245 1e88b0d048a9c69781bc0eb4d679c42a 190 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 14-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 AMBLS11_09245 1e88b0d048a9c69781bc0eb4d679c42a 190 SUPERFAMILY SSF55811 11 184 2.57E-36 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_09245 1e88b0d048a9c69781bc0eb4d679c42a 190 Pfam PF00293 NUDIX domain 29 143 6.2E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMBLS11_06490 56e5c1599544b84cfaa1e70d340afb19 443 Gene3D G3DSA:3.30.565.10 297 443 2.1E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06490 56e5c1599544b84cfaa1e70d340afb19 443 SMART SM00387 337 443 4.8E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_06490 56e5c1599544b84cfaa1e70d340afb19 443 SUPERFAMILY SSF55874 301 440 2.88E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06490 56e5c1599544b84cfaa1e70d340afb19 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 440 9.6E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_06490 56e5c1599544b84cfaa1e70d340afb19 443 Gene3D G3DSA:1.10.287.130 195 292 7.8E-6 T 14-10-2018 AMBLS11_06490 56e5c1599544b84cfaa1e70d340afb19 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06490 56e5c1599544b84cfaa1e70d340afb19 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13995 81545984a1433bec90dc30dabd41cc0f 127 SUPERFAMILY SSF55811 1 126 1.76E-35 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_13995 81545984a1433bec90dc30dabd41cc0f 127 PRINTS PR00502 NUDIX hydrolase family signature 32 46 3.4E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMBLS11_13995 81545984a1433bec90dc30dabd41cc0f 127 PRINTS PR00502 NUDIX hydrolase family signature 46 61 3.4E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMBLS11_13995 81545984a1433bec90dc30dabd41cc0f 127 Gene3D G3DSA:3.90.79.10 1 127 7.8E-37 T 14-10-2018 AMBLS11_13995 81545984a1433bec90dc30dabd41cc0f 127 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMBLS11_13995 81545984a1433bec90dc30dabd41cc0f 127 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 126 1.3E-38 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMBLS11_13995 81545984a1433bec90dc30dabd41cc0f 127 Pfam PF00293 NUDIX domain 5 122 1.7E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMBLS11_04320 df0da2268bf1fc23abba2e82d1d58716 105 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 82 6.5E-17 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMBLS11_04320 df0da2268bf1fc23abba2e82d1d58716 105 SUPERFAMILY SSF160544 7 86 2.88E-20 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMBLS11_04320 df0da2268bf1fc23abba2e82d1d58716 105 Gene3D G3DSA:3.40.1690.10 7 90 4.4E-22 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMBLS11_08765 3da719a20db0f4d1789173338d74fc29 157 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 78 118 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMBLS11_08765 3da719a20db0f4d1789173338d74fc29 157 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 30 154 5.2E-43 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 AMBLS11_08765 3da719a20db0f4d1789173338d74fc29 157 Gene3D G3DSA:3.40.140.10 19 157 1.8E-48 T 14-10-2018 AMBLS11_08765 3da719a20db0f4d1789173338d74fc29 157 SUPERFAMILY SSF53927 28 155 1.49E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMBLS11_08765 3da719a20db0f4d1789173338d74fc29 157 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 27 126 1.5E-14 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMBLS11_11330 134522aed48649b723ba493be22cd65f 279 Pfam PF00924 Mechanosensitive ion channel 69 264 1.1E-50 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_11330 134522aed48649b723ba493be22cd65f 279 Gene3D G3DSA:3.30.70.100 177 268 1.2E-26 T 14-10-2018 AMBLS11_11330 134522aed48649b723ba493be22cd65f 279 Gene3D G3DSA:2.30.30.60 125 173 3.3E-20 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_11330 134522aed48649b723ba493be22cd65f 279 SUPERFAMILY SSF82861 26 108 2.48E-16 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMBLS11_11330 134522aed48649b723ba493be22cd65f 279 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 139 173 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AMBLS11_11330 134522aed48649b723ba493be22cd65f 279 SUPERFAMILY SSF50182 110 175 6.87E-17 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_11330 134522aed48649b723ba493be22cd65f 279 SUPERFAMILY SSF82689 178 275 1.57E-32 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMBLS11_08830 fc4e54120050173281ff192c4b033ec3 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 1.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08830 fc4e54120050173281ff192c4b033ec3 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 1.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08830 fc4e54120050173281ff192c4b033ec3 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 1.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08830 fc4e54120050173281ff192c4b033ec3 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08830 fc4e54120050173281ff192c4b033ec3 219 Pfam PF00106 short chain dehydrogenase 2 181 7.7E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08830 fc4e54120050173281ff192c4b033ec3 219 Gene3D G3DSA:3.40.50.720 1 219 1.6E-55 T 14-10-2018 AMBLS11_08830 fc4e54120050173281ff192c4b033ec3 219 SUPERFAMILY SSF51735 2 219 3.76E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_12180 c832a51eaa24b830e9c86515bffea9ef 157 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.7E-55 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_12180 c832a51eaa24b830e9c86515bffea9ef 157 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 2.2E-58 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_12180 c832a51eaa24b830e9c86515bffea9ef 157 Gene3D G3DSA:3.40.50.960 1 156 1.0E-63 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_12180 c832a51eaa24b830e9c86515bffea9ef 157 SUPERFAMILY SSF52121 4 153 1.26E-60 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_12180 c832a51eaa24b830e9c86515bffea9ef 157 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.566 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_16225 7c047bc4638acdc4c51159a124999d93 468 Gene3D G3DSA:2.60.120.10 343 453 1.4E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_16225 7c047bc4638acdc4c51159a124999d93 468 Pfam PF00483 Nucleotidyl transferase 2 282 1.2E-71 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMBLS11_16225 7c047bc4638acdc4c51159a124999d93 468 SUPERFAMILY SSF53448 1 277 2.82E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16225 7c047bc4638acdc4c51159a124999d93 468 Gene3D G3DSA:3.90.550.10 1 342 1.1E-120 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16225 7c047bc4638acdc4c51159a124999d93 468 Pfam PF01050 Mannose-6-phosphate isomerase 311 461 3.1E-74 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AMBLS11_16225 7c047bc4638acdc4c51159a124999d93 468 SUPERFAMILY SSF51182 181 465 1.64E-89 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_16225 7c047bc4638acdc4c51159a124999d93 468 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 465 4.8E-226 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AMBLS11_13705 bba9161157d479248e629fcc64bc242e 411 SMART SM00388 209 274 2.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_13705 bba9161157d479248e629fcc64bc242e 411 SUPERFAMILY SSF55874 279 402 8.9E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_13705 bba9161157d479248e629fcc64bc242e 411 Gene3D G3DSA:1.10.287.130 154 274 1.5E-18 T 14-10-2018 AMBLS11_13705 bba9161157d479248e629fcc64bc242e 411 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 271 1.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_13705 bba9161157d479248e629fcc64bc242e 411 SUPERFAMILY SSF47384 192 271 7.65E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_13705 bba9161157d479248e629fcc64bc242e 411 Gene3D G3DSA:3.30.565.10 275 406 5.4E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 267 321 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 47 489 3.7E-153 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 214 233 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 265 286 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 38 63 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 326 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 335 356 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 398 417 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 85 108 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 203 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 448 469 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 370 388 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 112 136 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 155 167 3.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 Gene3D G3DSA:1.20.210.10 26 544 5.8E-218 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 39 543 7.3E-214 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMBLS11_18635 1e1bafb0e8a026d83ee403e308c51130 544 SUPERFAMILY SSF81442 35 543 1.44E-193 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 SUPERFAMILY SSF47203 225 380 3.54E-61 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 Gene3D G3DSA:1.20.140.10 232 383 2.4E-55 T 14-10-2018 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 Gene3D G3DSA:2.40.110.10 120 231 4.1E-42 T 14-10-2018 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 Gene3D G3DSA:1.10.540.10 1 119 7.5E-35 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 SUPERFAMILY SSF56645 1 240 4.19E-79 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 8.1E-28 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 PIRSF PIRSF016578 208 383 1.1E-12 T 14-10-2018 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 PIRSF PIRSF016578 4 192 7.8E-11 T 14-10-2018 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.5E-48 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_09065 1ef7d9bb27f25fd70304d21137fd3f04 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 4.2E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMBLS11_04020 3332a5c08c1377e34c1bc870073a81ac 380 Pfam PF01979 Amidohydrolase family 48 370 4.2E-18 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMBLS11_04020 3332a5c08c1377e34c1bc870073a81ac 380 SUPERFAMILY SSF51556 51 350 1.16E-89 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_04020 3332a5c08c1377e34c1bc870073a81ac 380 PIRSF PIRSF038994 1 380 1.3E-102 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AMBLS11_04020 3332a5c08c1377e34c1bc870073a81ac 380 Gene3D G3DSA:3.20.20.140 52 344 6.6E-105 T 14-10-2018 AMBLS11_04020 3332a5c08c1377e34c1bc870073a81ac 380 Gene3D G3DSA:2.30.40.10 9 373 6.6E-105 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_04020 3332a5c08c1377e34c1bc870073a81ac 380 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 6 367 3.5E-78 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AMBLS11_04020 3332a5c08c1377e34c1bc870073a81ac 380 SUPERFAMILY SSF51338 9 375 1.84E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_03155 3c7c364078c870b5ba3a9df3829b39b0 117 Pfam PF02152 Dihydroneopterin aldolase 4 112 7.6E-30 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMBLS11_03155 3c7c364078c870b5ba3a9df3829b39b0 117 SUPERFAMILY SSF55620 1 113 1.45E-30 T 14-10-2018 AMBLS11_03155 3c7c364078c870b5ba3a9df3829b39b0 117 Gene3D G3DSA:3.30.1130.10 1 117 9.0E-34 T 14-10-2018 AMBLS11_03155 3c7c364078c870b5ba3a9df3829b39b0 117 SMART SM00905 4 114 2.1E-31 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMBLS11_03155 3c7c364078c870b5ba3a9df3829b39b0 117 TIGRFAM TIGR00526 folB_dom: FolB domain 2 116 9.4E-26 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMBLS11_03155 3c7c364078c870b5ba3a9df3829b39b0 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 112 3.6E-24 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMBLS11_14410 d5809407572f8cd5c84d4748a8679fe8 582 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 8 574 39.872 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AMBLS11_14410 d5809407572f8cd5c84d4748a8679fe8 582 PIRSF PIRSF000719 7 577 3.3E-200 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AMBLS11_14410 d5809407572f8cd5c84d4748a8679fe8 582 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 16 573 0.0 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AMBLS11_14410 d5809407572f8cd5c84d4748a8679fe8 582 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 16 570 2.8E-222 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AMBLS11_03990 4ba3aec52185c0ad45786f25729d4244 423 SUPERFAMILY SSF51338 9 422 8.25E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_03990 4ba3aec52185c0ad45786f25729d4244 423 Hamap MF_00372 Imidazolonepropionase [hutI]. 10 423 39.189 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_03990 4ba3aec52185c0ad45786f25729d4244 423 SUPERFAMILY SSF51556 85 382 9.61E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_03990 4ba3aec52185c0ad45786f25729d4244 423 Gene3D G3DSA:3.20.20.140 86 383 7.1E-153 T 14-10-2018 AMBLS11_03990 4ba3aec52185c0ad45786f25729d4244 423 Pfam PF01979 Amidohydrolase family 83 422 5.9E-18 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMBLS11_03990 4ba3aec52185c0ad45786f25729d4244 423 Gene3D G3DSA:2.30.40.10 15 420 7.1E-153 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_03990 4ba3aec52185c0ad45786f25729d4244 423 TIGRFAM TIGR01224 hutI: imidazolonepropionase 82 421 8.5E-133 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_09930 e736efc5648ba9712a6b62fef2d72bbc 365 Gene3D G3DSA:3.20.20.70 4 361 1.4E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_09930 e736efc5648ba9712a6b62fef2d72bbc 365 SUPERFAMILY SSF51395 2 352 1.78E-98 T 14-10-2018 AMBLS11_09930 e736efc5648ba9712a6b62fef2d72bbc 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 352 2.7E-67 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMBLS11_03190 e6b9e72abd777496e62f58cdd846841b 187 Gene3D G3DSA:1.10.260.40 6 89 7.3E-20 T 14-10-2018 AMBLS11_03190 e6b9e72abd777496e62f58cdd846841b 187 Pfam PF01381 Helix-turn-helix 20 71 2.0E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_03190 e6b9e72abd777496e62f58cdd846841b 187 SMART SM00530 18 73 3.5E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_03190 e6b9e72abd777496e62f58cdd846841b 187 Gene3D G3DSA:2.60.120.10 95 187 3.8E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_03190 e6b9e72abd777496e62f58cdd846841b 187 SUPERFAMILY SSF47413 12 79 1.88E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_03190 e6b9e72abd777496e62f58cdd846841b 187 SUPERFAMILY SSF51182 58 186 4.26E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_03525 d11f848b674c7ebc4ebbecaf067836be 210 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 22 204 2.4E-71 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMBLS11_03525 d11f848b674c7ebc4ebbecaf067836be 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 132 143 2.6E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMBLS11_03525 d11f848b674c7ebc4ebbecaf067836be 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 2.6E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMBLS11_03525 d11f848b674c7ebc4ebbecaf067836be 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 176 188 2.6E-8 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMBLS11_03525 d11f848b674c7ebc4ebbecaf067836be 210 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 15 53 3.3E-17 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMBLS11_03525 d11f848b674c7ebc4ebbecaf067836be 210 Gene3D G3DSA:1.20.5.510 13 53 1.6E-6 T 14-10-2018 AMBLS11_03525 d11f848b674c7ebc4ebbecaf067836be 210 Gene3D G3DSA:2.102.10.10 56 204 5.4E-47 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMBLS11_03525 d11f848b674c7ebc4ebbecaf067836be 210 Pfam PF00355 Rieske [2Fe-2S] domain 124 189 4.9E-10 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMBLS11_03525 d11f848b674c7ebc4ebbecaf067836be 210 SUPERFAMILY SSF50022 43 202 6.01E-40 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Gene3D G3DSA:2.40.30.170 110 123 4.0E-12 T 14-10-2018 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 107 315 2.5E-78 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Gene3D G3DSA:2.40.50.100 124 158 4.0E-12 T 14-10-2018 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 97 394 2.5E-39 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Gene3D G3DSA:2.40.420.20 98 109 4.0E-12 T 14-10-2018 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Gene3D G3DSA:2.40.50.320 413 484 4.6E-15 T 14-10-2018 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Gene3D G3DSA:2.40.50.320 497 570 3.9E-14 T 14-10-2018 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Gene3D G3DSA:2.40.50.320 582 656 1.2E-17 T 14-10-2018 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Gene3D G3DSA:2.40.30.170 225 322 2.1E-24 T 14-10-2018 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Pfam PF11604 Copper binding periplasmic protein CusF 417 481 1.2E-20 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Pfam PF11604 Copper binding periplasmic protein CusF 588 653 2.2E-21 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Pfam PF11604 Copper binding periplasmic protein CusF 502 567 8.7E-18 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 SUPERFAMILY SSF111369 124 320 6.02E-18 T 14-10-2018 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Gene3D G3DSA:2.40.420.20 323 412 9.5E-23 T 14-10-2018 AMBLS11_01225 85470e578614fadbfd657586ae16d31f 672 Gene3D G3DSA:1.10.287.470 159 174 4.0E-12 T 14-10-2018 AMBLS11_17780 af366e674b51c3a95b39953012c86fef 269 SUPERFAMILY SSF100950 92 245 1.36E-25 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_17780 af366e674b51c3a95b39953012c86fef 269 SUPERFAMILY SSF46785 8 65 2.73E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_17780 af366e674b51c3a95b39953012c86fef 269 SMART SM01134 84 245 6.4E-50 T 14-10-2018 AMBLS11_17780 af366e674b51c3a95b39953012c86fef 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 60 7.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMBLS11_17780 af366e674b51c3a95b39953012c86fef 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 42 7.4E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMBLS11_17780 af366e674b51c3a95b39953012c86fef 269 Pfam PF00455 DeoR C terminal sensor domain 92 244 8.3E-40 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain AMBLS11_17780 af366e674b51c3a95b39953012c86fef 269 Pfam PF08220 DeoR-like helix-turn-helix domain 10 61 2.2E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMBLS11_17780 af366e674b51c3a95b39953012c86fef 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 10 44 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMBLS11_17780 af366e674b51c3a95b39953012c86fef 269 SMART SM00420 10 62 4.5E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMBLS11_01125 826c852570979de1ea50911725ea4e9e 184 Gene3D G3DSA:3.40.50.1390 1 125 2.2E-47 T 14-10-2018 AMBLS11_01125 826c852570979de1ea50911725ea4e9e 184 SUPERFAMILY SSF53041 1 135 2.62E-45 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AMBLS11_01125 826c852570979de1ea50911725ea4e9e 184 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMBLS11_01125 826c852570979de1ea50911725ea4e9e 184 Pfam PF00239 Resolvase, N terminal domain 3 136 2.3E-43 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMBLS11_01125 826c852570979de1ea50911725ea4e9e 184 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMBLS11_01125 826c852570979de1ea50911725ea4e9e 184 SUPERFAMILY SSF46689 138 179 2.42E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_01125 826c852570979de1ea50911725ea4e9e 184 SMART SM00857 2 136 2.9E-57 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMBLS11_04645 bb407c434c528f2dd2799682a9fa7227 609 SUPERFAMILY SSF51735 357 500 5.3E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04645 bb407c434c528f2dd2799682a9fa7227 609 Pfam PF02254 TrkA-N domain 361 474 3.2E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMBLS11_04645 bb407c434c528f2dd2799682a9fa7227 609 Gene3D G3DSA:3.40.50.720 357 516 6.3E-34 T 14-10-2018 AMBLS11_04645 bb407c434c528f2dd2799682a9fa7227 609 SUPERFAMILY SSF116726 531 603 1.44E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_04645 bb407c434c528f2dd2799682a9fa7227 609 Pfam PF00999 Sodium/hydrogen exchanger family 5 327 5.2E-55 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMBLS11_04645 bb407c434c528f2dd2799682a9fa7227 609 Gene3D G3DSA:1.20.1530.20 1 340 4.2E-70 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMBLS11_04645 bb407c434c528f2dd2799682a9fa7227 609 Gene3D G3DSA:3.30.70.1450 534 607 2.0E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_04645 bb407c434c528f2dd2799682a9fa7227 609 Pfam PF02080 TrkA-C domain 538 605 1.6E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 SMART SM00421 156 213 2.2E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 SMART SM00448 1 114 1.7E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 SUPERFAMILY SSF46894 152 211 3.4E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 Pfam PF00072 Response regulator receiver domain 3 115 1.5E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 5.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 5.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 5.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 SUPERFAMILY SSF52172 2 126 5.98E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 Gene3D G3DSA:3.40.50.12740 1 217 4.8E-47 T 14-10-2018 AMBLS11_06650 281f696803ec7c8ab15fa24cdef008c0 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 209 4.7E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_10930 7cf9b3fc343748a10f29786245b22445 58 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 3.1E-14 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AMBLS11_10930 7cf9b3fc343748a10f29786245b22445 58 PIRSF PIRSF036466 1 55 8.3E-21 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AMBLS11_10930 7cf9b3fc343748a10f29786245b22445 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 48 20.288 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 Gene3D G3DSA:1.10.274.10 206 333 1.0E-53 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 Pfam PF05524 PEP-utilising enzyme, N-terminal 188 310 6.3E-20 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 Gene3D G3DSA:3.30.450.40 7 173 1.0E-49 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 188 736 3.2E-129 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 Gene3D G3DSA:3.50.30.10 189 420 1.0E-53 T 14-10-2018 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 444 730 5.3E-93 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 SUPERFAMILY SSF52009 292 418 5.1E-28 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 480 499 4.8E-23 T 14-10-2018 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 654 669 4.8E-23 T 14-10-2018 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 690 702 4.8E-23 T 14-10-2018 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 637 652 4.8E-23 T 14-10-2018 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 Gene3D G3DSA:3.20.20.60 421 736 1.7E-98 T 14-10-2018 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 Pfam PF00391 PEP-utilising enzyme, mobile domain 340 412 5.5E-20 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 Pfam PF01590 GAF domain 27 163 1.6E-19 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 SUPERFAMILY SSF55781 8 168 7.2E-33 T 14-10-2018 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 637 655 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 SUPERFAMILY SSF47831 216 325 2.09E-24 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 SMART SM00065 26 173 6.5E-25 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_02715 bc6d5f7dc6d0062bd1c5f1fc8a55acb8 736 SUPERFAMILY SSF51621 444 731 4.45E-94 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMBLS11_12685 2d59e98ed149dd3bed012a4c383662e3 376 Pfam PF01636 Phosphotransferase enzyme family 51 292 2.1E-36 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMBLS11_12685 2d59e98ed149dd3bed012a4c383662e3 376 Gene3D G3DSA:3.90.1200.10 142 369 3.3E-62 T 14-10-2018 AMBLS11_12685 2d59e98ed149dd3bed012a4c383662e3 376 Gene3D G3DSA:3.30.200.20 17 136 1.6E-24 T 14-10-2018 AMBLS11_12685 2d59e98ed149dd3bed012a4c383662e3 376 SUPERFAMILY SSF56112 38 364 1.82E-52 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_02725 83814779870a0d0d045e47eac228cbc9 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 6.9E-82 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMBLS11_02725 83814779870a0d0d045e47eac228cbc9 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 11 261 19.99 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMBLS11_02725 83814779870a0d0d045e47eac228cbc9 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 255 1.7E-81 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMBLS11_02725 83814779870a0d0d045e47eac228cbc9 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMBLS11_14220 5e5020e2d11966aec1ae4828ec2e1988 228 Pfam PF01168 Alanine racemase, N-terminal domain 18 227 4.9E-28 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMBLS11_14220 5e5020e2d11966aec1ae4828ec2e1988 228 PIRSF PIRSF004848 1 228 3.3E-77 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMBLS11_14220 5e5020e2d11966aec1ae4828ec2e1988 228 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 2.1E-83 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMBLS11_14220 5e5020e2d11966aec1ae4828ec2e1988 228 Gene3D G3DSA:3.20.20.10 1 228 1.6E-84 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_14220 5e5020e2d11966aec1ae4828ec2e1988 228 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMBLS11_14220 5e5020e2d11966aec1ae4828ec2e1988 228 SUPERFAMILY SSF51419 1 225 2.36E-81 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_14220 5e5020e2d11966aec1ae4828ec2e1988 228 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 226 33.17 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Gene3D G3DSA:1.10.287.130 278 354 6.8E-19 T 14-10-2018 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Gene3D G3DSA:3.40.50.2300 518 646 1.0E-32 T 14-10-2018 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Gene3D G3DSA:3.30.450.20 149 277 3.5E-23 T 14-10-2018 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SUPERFAMILY SSF55785 147 273 1.4E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Pfam PF00512 His Kinase A (phospho-acceptor) domain 289 351 6.6E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Pfam PF01627 Hpt domain 695 770 3.1E-13 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Gene3D G3DSA:3.30.565.10 355 517 7.2E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Pfam PF00072 Response regulator receiver domain 533 642 2.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Gene3D G3DSA:1.20.120.160 664 785 4.1E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SUPERFAMILY SSF55874 342 517 3.67E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SUPERFAMILY SSF47226 671 782 2.49E-26 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 PIRSF PIRSF003182 11 786 1.2E-282 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SMART SM00388 288 353 2.3E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SMART SM00448 531 643 1.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 161 281 5.8E-17 T 14-10-2018 IPR000014 PAS domain AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 469 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SUPERFAMILY SSF47384 276 354 1.86E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Pfam PF08448 PAS fold 168 277 1.2E-17 T 14-10-2018 IPR013656 PAS fold-4 AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 515 3.1E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 Gene3D G3DSA:1.10.287.970 9 95 1.3E-12 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SUPERFAMILY SSF52172 529 648 6.97E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SMART SM00387 400 516 1.7E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SMART SM00091 161 227 6.3E-7 T 14-10-2018 IPR000014 PAS domain AMBLS11_14600 f872fd4ebe81f49d7545527f0e24246c 787 SMART SM00086 233 275 5.6E-4 T 14-10-2018 IPR001610 PAC motif AMBLS11_13975 0c0a9893545f4f07aaec0a3ad8dd25e5 205 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 8 191 4.1E-63 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMBLS11_13975 0c0a9893545f4f07aaec0a3ad8dd25e5 205 Gene3D G3DSA:3.40.50.300 4 203 4.1E-71 T 14-10-2018 AMBLS11_13975 0c0a9893545f4f07aaec0a3ad8dd25e5 205 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 6 200 27.967 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMBLS11_13975 0c0a9893545f4f07aaec0a3ad8dd25e5 205 SUPERFAMILY SSF52540 7 201 9.19E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13975 0c0a9893545f4f07aaec0a3ad8dd25e5 205 Pfam PF01121 Dephospho-CoA kinase 8 183 4.9E-71 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMBLS11_11065 7ceeeba0288d51ad1e8e65187b2fb8cd 413 SUPERFAMILY SSF47781 309 384 3.45E-11 T 14-10-2018 IPR010994 RuvA domain 2-like AMBLS11_11065 7ceeeba0288d51ad1e8e65187b2fb8cd 413 Gene3D G3DSA:3.20.20.70 56 199 6.0E-7 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_11065 7ceeeba0288d51ad1e8e65187b2fb8cd 413 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 6 406 2.3E-161 T 14-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative AMBLS11_11065 7ceeeba0288d51ad1e8e65187b2fb8cd 413 SUPERFAMILY SSF102114 50 191 4.45E-11 T 14-10-2018 AMBLS11_07195 a5341a24d684c0f8a820a62c567b9ae4 332 Pfam PF00962 Adenosine/AMP deaminase 9 328 2.0E-70 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AMBLS11_07195 a5341a24d684c0f8a820a62c567b9ae4 332 SUPERFAMILY SSF51556 6 326 3.27E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_07195 a5341a24d684c0f8a820a62c567b9ae4 332 Hamap MF_01962 Adenine deaminase. 6 318 77.917 T 14-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AMBLS11_07195 a5341a24d684c0f8a820a62c567b9ae4 332 Gene3D G3DSA:3.20.20.140 2 332 2.9E-103 T 14-10-2018 AMBLS11_07195 a5341a24d684c0f8a820a62c567b9ae4 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 11 329 3.4E-110 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AMBLS11_15025 8e5fd580af9588371db9366012868e0e 340 Pfam PF01145 SPFH domain / Band 7 family 28 226 1.7E-22 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_15025 8e5fd580af9588371db9366012868e0e 340 TIGRFAM TIGR01932 hflC: HflC protein 16 317 6.1E-70 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AMBLS11_15025 8e5fd580af9588371db9366012868e0e 340 SUPERFAMILY SSF117892 57 221 1.12E-19 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily AMBLS11_15025 8e5fd580af9588371db9366012868e0e 340 PIRSF PIRSF005651 1 327 4.7E-91 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AMBLS11_15025 8e5fd580af9588371db9366012868e0e 340 SMART SM00244 24 216 2.0E-11 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_18765 babb86bad86964a8f3d0714ca5c076bb 455 Pfam PF03109 ABC1 family 127 232 6.2E-23 T 14-10-2018 IPR004147 UbiB domain AMBLS11_18765 babb86bad86964a8f3d0714ca5c076bb 455 SUPERFAMILY SSF56112 109 340 1.26E-13 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 PRINTS PR01439 Cellulose synthase subunit A signature 414 440 1.4E-21 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 PRINTS PR01439 Cellulose synthase subunit A signature 555 576 1.4E-21 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 PRINTS PR01439 Cellulose synthase subunit A signature 443 462 1.4E-21 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 PRINTS PR01439 Cellulose synthase subunit A signature 152 171 1.4E-21 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 PRINTS PR01439 Cellulose synthase subunit A signature 483 502 1.4E-21 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 PRINTS PR01439 Cellulose synthase subunit A signature 68 88 1.4E-21 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 Gene3D G3DSA:2.40.10.220 578 684 1.5E-6 T 14-10-2018 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 Pfam PF07238 PilZ domain 582 679 1.2E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 15 713 9.4E-238 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 Gene3D G3DSA:3.90.550.10 135 374 1.2E-84 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 SUPERFAMILY SSF53448 145 446 8.25E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 Pfam PF00535 Glycosyl transferase family 2 146 334 5.8E-35 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_15750 c7ec422aea14042d71137a9a1126d88f 741 Pfam PF03552 Cellulose synthase 336 445 4.8E-9 T 14-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 SUPERFAMILY SSF51905 7 462 4.8E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 349 1.4E-88 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 321 4.5E-13 T 14-10-2018 AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 4.5E-13 T 14-10-2018 AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 173 188 4.5E-13 T 14-10-2018 AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 321 337 4.5E-13 T 14-10-2018 AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 Gene3D G3DSA:3.50.50.60 8 356 9.7E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 Pfam PF01494 FAD binding domain 7 344 1.2E-22 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 320 333 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AMBLS11_13835 9da9d5187341f16c6054c30c097948ba 476 Gene3D G3DSA:3.30.9.50 100 295 9.7E-82 T 14-10-2018 AMBLS11_06530 80e5ede7f71c9eacd51ecf68f27524ec 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 334 1.3E-119 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AMBLS11_06530 80e5ede7f71c9eacd51ecf68f27524ec 343 Gene3D G3DSA:1.20.970.10 7 70 4.1E-19 T 14-10-2018 AMBLS11_06530 80e5ede7f71c9eacd51ecf68f27524ec 343 SUPERFAMILY SSF47648 6 70 2.09E-16 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_06530 80e5ede7f71c9eacd51ecf68f27524ec 343 Gene3D G3DSA:3.40.1030.10 74 342 5.8E-98 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_06530 80e5ede7f71c9eacd51ecf68f27524ec 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 66 1.2E-14 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_06530 80e5ede7f71c9eacd51ecf68f27524ec 343 SUPERFAMILY SSF52418 73 332 6.93E-88 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_06530 80e5ede7f71c9eacd51ecf68f27524ec 343 Pfam PF00591 Glycosyl transferase family, a/b domain 76 323 6.1E-94 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_06530 80e5ede7f71c9eacd51ecf68f27524ec 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 335 37.761 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AMBLS11_11130 5ec55ca4a006182eef27075e9037d9a5 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 289 3.3E-69 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AMBLS11_11130 5ec55ca4a006182eef27075e9037d9a5 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 313 6.7E-79 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AMBLS11_11130 5ec55ca4a006182eef27075e9037d9a5 327 PIRSF PIRSF006470 1 327 1.5E-89 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AMBLS11_11130 5ec55ca4a006182eef27075e9037d9a5 327 Gene3D G3DSA:3.40.190.170 31 327 6.5E-100 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AMBLS11_11130 5ec55ca4a006182eef27075e9037d9a5 327 SUPERFAMILY SSF53850 145 293 1.59E-7 T 14-10-2018 AMBLS11_17205 85d3310562791bb7c82257f68708fbf5 390 Pfam PF00480 ROK family 94 255 1.0E-18 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMBLS11_17205 85d3310562791bb7c82257f68708fbf5 390 SUPERFAMILY SSF46785 21 87 4.5E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_17205 85d3310562791bb7c82257f68708fbf5 390 Gene3D G3DSA:3.30.420.40 203 389 8.4E-25 T 14-10-2018 AMBLS11_17205 85d3310562791bb7c82257f68708fbf5 390 Pfam PF13412 Winged helix-turn-helix DNA-binding 23 68 5.5E-9 T 14-10-2018 AMBLS11_17205 85d3310562791bb7c82257f68708fbf5 390 SUPERFAMILY SSF53067 94 387 5.56E-30 T 14-10-2018 AMBLS11_17205 85d3310562791bb7c82257f68708fbf5 390 Gene3D G3DSA:3.30.420.40 88 202 3.4E-5 T 14-10-2018 AMBLS11_17205 85d3310562791bb7c82257f68708fbf5 390 Gene3D G3DSA:1.10.10.10 20 87 2.2E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03560 5d5752aecc53fb7d86d673c79d641c78 250 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 238 1.2E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_03560 5d5752aecc53fb7d86d673c79d641c78 250 Gene3D G3DSA:1.10.10.10 137 243 2.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03560 5d5752aecc53fb7d86d673c79d641c78 250 Gene3D G3DSA:3.40.50.2300 1 129 9.4E-11 T 14-10-2018 AMBLS11_03560 5d5752aecc53fb7d86d673c79d641c78 250 SMART SM00862 159 238 2.2E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_03560 5d5752aecc53fb7d86d673c79d641c78 250 SUPERFAMILY SSF52172 8 134 2.56E-8 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_03560 5d5752aecc53fb7d86d673c79d641c78 250 SUPERFAMILY SSF46894 138 239 9.7E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 SUPERFAMILY SSF51905 5 191 1.3E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 Gene3D G3DSA:3.30.413.10 631 810 3.6E-33 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 SUPERFAMILY SSF55124 501 640 5.89E-28 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 SUPERFAMILY SSF51905 151 311 2.5E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 SUPERFAMILY SSF56014 632 807 6.15E-51 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 620 7.8E-12 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 3.8E-10 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 Gene3D G3DSA:3.50.50.60 11 284 3.0E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PIRSF PIRSF037149 1 834 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 756 2.6E-18 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 5.8E-17 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 5.8E-17 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.8E-17 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.8E-17 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 5.8E-17 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 10 800 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 6.5E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 6.5E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 288 1.4E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 Gene3D G3DSA:3.50.50.60 112 247 3.0E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 Gene3D G3DSA:1.10.10.1100 422 476 3.3E-11 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 5.2E-8 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 5.2E-8 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 5.2E-8 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 5.2E-8 T 14-10-2018 AMBLS11_02960 c8b622d5e8a76646b5de37dbdbca712a 849 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 141 7.4E-42 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 298 2.1E-45 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 301 6.9E-95 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 SUPERFAMILY SSF53671 2 302 3.01E-88 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 117 131 4.7E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 44 58 4.7E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 4.7E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 77 90 4.7E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 4.7E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 Gene3D G3DSA:3.40.50.1370 131 288 7.7E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 1.4E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 1.4E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 1.4E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 1.4E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMBLS11_02100 238cd4a69e6f5aaa75b1b05f8a6a8353 303 Gene3D G3DSA:3.40.50.1370 9 297 7.7E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMBLS11_08580 776adc90e378da97fd50d0d342a47b99 542 SUPERFAMILY SSF111331 239 536 1.54E-56 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMBLS11_08580 776adc90e378da97fd50d0d342a47b99 542 Pfam PF00781 Diacylglycerol kinase catalytic domain 241 365 2.7E-28 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMBLS11_08580 776adc90e378da97fd50d0d342a47b99 542 Gene3D G3DSA:2.60.200.40 368 527 6.5E-25 T 14-10-2018 AMBLS11_08580 776adc90e378da97fd50d0d342a47b99 542 Gene3D G3DSA:3.90.190.10 91 237 1.3E-27 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMBLS11_08580 776adc90e378da97fd50d0d342a47b99 542 Pfam PF00782 Dual specificity phosphatase, catalytic domain 99 227 1.2E-19 T 14-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 AMBLS11_08580 776adc90e378da97fd50d0d342a47b99 542 SUPERFAMILY SSF52799 85 229 8.98E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMBLS11_08580 776adc90e378da97fd50d0d342a47b99 542 Gene3D G3DSA:3.40.50.10330 238 367 3.7E-31 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMBLS11_08580 776adc90e378da97fd50d0d342a47b99 542 SMART SM00195 90 229 9.8E-22 T 14-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 AMBLS11_08580 776adc90e378da97fd50d0d342a47b99 542 SMART SM00046 240 363 1.3E-8 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMBLS11_06255 86d67706036be67c93b2937fd5bcc38e 163 Gene3D G3DSA:3.40.630.30 1 160 3.5E-53 T 14-10-2018 AMBLS11_06255 86d67706036be67c93b2937fd5bcc38e 163 SUPERFAMILY SSF55729 5 157 6.42E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_06255 86d67706036be67c93b2937fd5bcc38e 163 Pfam PF00583 Acetyltransferase (GNAT) family 36 138 1.1E-20 T 14-10-2018 IPR000182 GNAT domain AMBLS11_06645 e1cab0302435d49b306ac8a9ae229d06 792 Pfam PF00593 TonB dependent receptor 292 791 1.1E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_06645 e1cab0302435d49b306ac8a9ae229d06 792 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 193 1.3E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_06645 e1cab0302435d49b306ac8a9ae229d06 792 SUPERFAMILY SSF56935 61 792 1.65E-112 T 14-10-2018 AMBLS11_06645 e1cab0302435d49b306ac8a9ae229d06 792 Gene3D G3DSA:2.40.170.20 76 792 9.8E-141 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_00560 4c0c1d63daae229d2363d705b1368eb9 258 Gene3D G3DSA:3.40.50.150 67 257 2.1E-71 T 14-10-2018 AMBLS11_00560 4c0c1d63daae229d2363d705b1368eb9 258 Pfam PF04445 Putative SAM-dependent methyltransferase 37 254 1.6E-88 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AMBLS11_00560 4c0c1d63daae229d2363d705b1368eb9 258 SUPERFAMILY SSF53335 13 256 1.58E-66 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_00560 4c0c1d63daae229d2363d705b1368eb9 258 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 8 256 36.228 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AMBLS11_01470 d860cfdaea3a6137ea4c6e5958f7a43b 131 Gene3D G3DSA:1.10.287.70 28 131 2.0E-11 T 14-10-2018 AMBLS11_01470 d860cfdaea3a6137ea4c6e5958f7a43b 131 SUPERFAMILY SSF81324 44 129 1.06E-10 T 14-10-2018 AMBLS11_01470 d860cfdaea3a6137ea4c6e5958f7a43b 131 Pfam PF07885 Ion channel 57 129 4.7E-11 T 14-10-2018 IPR013099 Potassium channel domain AMBLS11_14415 d9746af9330c39ae9c322a63a17dc05e 226 SMART SM00862 146 221 3.3E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_14415 d9746af9330c39ae9c322a63a17dc05e 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.1E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_14415 d9746af9330c39ae9c322a63a17dc05e 226 SUPERFAMILY SSF52172 1 181 5.11E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14415 d9746af9330c39ae9c322a63a17dc05e 226 Pfam PF00072 Response regulator receiver domain 3 113 9.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14415 d9746af9330c39ae9c322a63a17dc05e 226 Gene3D G3DSA:1.10.10.10 118 224 2.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_14415 d9746af9330c39ae9c322a63a17dc05e 226 Gene3D G3DSA:3.40.50.2300 1 117 9.1E-35 T 14-10-2018 AMBLS11_14415 d9746af9330c39ae9c322a63a17dc05e 226 SMART SM00448 1 112 2.1E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_12725 d61468c71289de98edf9f5ec7d7f0a13 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.9E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_12725 d61468c71289de98edf9f5ec7d7f0a13 90 SMART SM00411 1 90 2.5E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_12725 d61468c71289de98edf9f5ec7d7f0a13 90 SUPERFAMILY SSF47729 1 90 2.06E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMBLS11_12725 d61468c71289de98edf9f5ec7d7f0a13 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.2E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_12725 d61468c71289de98edf9f5ec7d7f0a13 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.2E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_12725 d61468c71289de98edf9f5ec7d7f0a13 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.2E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_12725 d61468c71289de98edf9f5ec7d7f0a13 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMBLS11_12725 d61468c71289de98edf9f5ec7d7f0a13 90 Gene3D G3DSA:4.10.520.10 1 90 4.2E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMBLS11_13190 20bcc7fe316f36809bc77b7a449087b0 210 Pfam PF02563 Polysaccharide biosynthesis/export protein 42 115 1.3E-21 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMBLS11_13190 20bcc7fe316f36809bc77b7a449087b0 210 Pfam PF10531 SLBB domain 125 176 2.1E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_13190 20bcc7fe316f36809bc77b7a449087b0 210 TIGRFAM TIGR03027 pepcterm_export: putative polysaccharide export protein, PEP-CTERM sytem-associated 46 210 4.7E-68 T 14-10-2018 IPR017477 PEP-CTERM, putative polysaccharide export protein AMBLS11_13190 20bcc7fe316f36809bc77b7a449087b0 210 Gene3D G3DSA:3.30.1950.10 51 115 5.6E-14 T 14-10-2018 AMBLS11_13190 20bcc7fe316f36809bc77b7a449087b0 210 Gene3D G3DSA:3.10.560.10 116 207 1.7E-17 T 14-10-2018 AMBLS11_11175 a1f2e971cd9b28754dfaccf25bbf7d4e 311 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 90 285 3.9E-14 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMBLS11_11175 a1f2e971cd9b28754dfaccf25bbf7d4e 311 Gene3D G3DSA:3.40.50.1110 85 311 9.8E-63 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMBLS11_11175 a1f2e971cd9b28754dfaccf25bbf7d4e 311 SUPERFAMILY SSF52266 86 308 3.5E-45 T 14-10-2018 AMBLS11_16105 69509b38857a5b37d82bb4f5f8b3bcdf 352 SMART SM01358 29 259 8.2E-8 T 14-10-2018 IPR032255 Helical bimodular sensor domain AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 Gene3D G3DSA:2.30.33.40 1 96 7.3E-37 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.4E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.4E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 SMART SM00883 2 95 1.2E-49 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.515 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 SUPERFAMILY SSF50129 1 96 6.71E-31 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_18045 ca04d43f03550e12557e0c97657c3313 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 2.0E-30 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 213 246 - T 14-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 Pfam PF00106 short chain dehydrogenase 4 103 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 Gene3D G3DSA:3.40.50.720 1 147 1.0E-17 T 14-10-2018 AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 SUPERFAMILY SSF56176 178 381 1.64E-48 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 Pfam PF01565 FAD binding domain 213 347 1.1E-28 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 46 74 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 SUPERFAMILY SSF51735 3 141 1.06E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 Gene3D G3DSA:3.30.465.10 279 602 7.1E-71 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 Gene3D G3DSA:3.30.43.10 188 265 2.3E-18 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMBLS11_01280 93a488038c9c3b6c9f2b247d0c6e99d8 615 Gene3D G3DSA:3.40.462.20 380 576 7.1E-71 T 14-10-2018 AMBLS11_09205 a7985e0e0ed9f2bd376c6525ef9c9e55 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMBLS11_09205 a7985e0e0ed9f2bd376c6525ef9c9e55 441 Pfam PF00271 Helicase conserved C-terminal domain 235 341 8.5E-27 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_09205 a7985e0e0ed9f2bd376c6525ef9c9e55 441 Gene3D G3DSA:3.40.50.300 220 419 2.9E-45 T 14-10-2018 AMBLS11_09205 a7985e0e0ed9f2bd376c6525ef9c9e55 441 SUPERFAMILY SSF52540 73 356 4.49E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09205 a7985e0e0ed9f2bd376c6525ef9c9e55 441 Gene3D G3DSA:3.40.50.300 2 219 9.4E-66 T 14-10-2018 AMBLS11_09205 a7985e0e0ed9f2bd376c6525ef9c9e55 441 SMART SM00490 260 341 5.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_09205 a7985e0e0ed9f2bd376c6525ef9c9e55 441 Pfam PF00270 DEAD/DEAH box helicase 25 190 3.1E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_09205 a7985e0e0ed9f2bd376c6525ef9c9e55 441 SMART SM00487 20 223 2.1E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_09275 a3c7558479c6e53a209e6903401aa507 395 Gene3D G3DSA:3.40.50.970 4 392 7.7E-143 T 14-10-2018 AMBLS11_09275 a3c7558479c6e53a209e6903401aa507 395 Pfam PF00676 Dehydrogenase E1 component 58 350 7.0E-97 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMBLS11_09275 a3c7558479c6e53a209e6903401aa507 395 SUPERFAMILY SSF52518 26 388 9.21E-112 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_01220 cc193474cd87600498be3ecb28b3d9f1 454 Gene3D G3DSA:1.20.1600.10 23 440 2.4E-50 T 14-10-2018 AMBLS11_01220 cc193474cd87600498be3ecb28b3d9f1 454 SUPERFAMILY SSF56954 4 438 2.49E-52 T 14-10-2018 AMBLS11_01220 cc193474cd87600498be3ecb28b3d9f1 454 Pfam PF02321 Outer membrane efflux protein 256 438 6.1E-16 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_01220 cc193474cd87600498be3ecb28b3d9f1 454 Pfam PF02321 Outer membrane efflux protein 30 209 1.5E-12 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_17645 506fa1c97b47f841c8866ec94cf852ef 63 Pfam PF05532 CsbD-like 4 56 1.1E-21 T 14-10-2018 IPR008462 CsbD-like domain AMBLS11_17645 506fa1c97b47f841c8866ec94cf852ef 63 SUPERFAMILY SSF69047 1 62 4.45E-25 T 14-10-2018 IPR036629 YjbJ superfamily AMBLS11_17645 506fa1c97b47f841c8866ec94cf852ef 63 PIRSF PIRSF039008 1 63 4.3E-31 T 14-10-2018 IPR026042 Stress response protein YjbJ AMBLS11_17645 506fa1c97b47f841c8866ec94cf852ef 63 Gene3D G3DSA:1.10.1470.10 1 63 6.6E-31 T 14-10-2018 IPR036629 YjbJ superfamily AMBLS11_12010 5837c094050c8eeffae969fc4d8dacf6 254 Pfam PF09836 Putative DNA-binding domain 8 97 1.9E-19 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria AMBLS11_12010 5837c094050c8eeffae969fc4d8dacf6 254 Gene3D G3DSA:1.10.150.690 33 127 2.6E-25 T 14-10-2018 AMBLS11_12010 5837c094050c8eeffae969fc4d8dacf6 254 Gene3D G3DSA:1.10.10.2180 132 254 5.4E-5 T 14-10-2018 AMBLS11_03615 94ddbdd568f267130a144920d6e83149 326 Gene3D G3DSA:3.10.580.10 199 323 2.5E-40 T 14-10-2018 AMBLS11_03615 94ddbdd568f267130a144920d6e83149 326 Pfam PF00571 CBS domain 203 259 8.5E-4 T 14-10-2018 IPR000644 CBS domain AMBLS11_03615 94ddbdd568f267130a144920d6e83149 326 Pfam PF00571 CBS domain 270 322 0.0024 T 14-10-2018 IPR000644 CBS domain AMBLS11_03615 94ddbdd568f267130a144920d6e83149 326 PIRSF PIRSF004692 1 326 8.5E-130 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AMBLS11_03615 94ddbdd568f267130a144920d6e83149 326 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 47 315 6.0E-108 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AMBLS11_03615 94ddbdd568f267130a144920d6e83149 326 Pfam PF01380 SIS domain 43 174 2.4E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMBLS11_03615 94ddbdd568f267130a144920d6e83149 326 Gene3D G3DSA:3.40.50.10490 4 198 2.8E-66 T 14-10-2018 AMBLS11_03615 94ddbdd568f267130a144920d6e83149 326 SUPERFAMILY SSF53697 8 321 4.89E-66 T 14-10-2018 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 SMART SM00382 188 327 2.1E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 597 2.1E-244 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 Gene3D G3DSA:1.10.8.60 326 400 1.8E-28 T 14-10-2018 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 SUPERFAMILY SSF52540 148 395 1.6E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 SUPERFAMILY SSF140990 406 607 6.28E-75 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 Gene3D G3DSA:1.20.58.760 401 605 7.6E-74 T 14-10-2018 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 Gene3D G3DSA:3.40.50.300 146 324 2.7E-70 T 14-10-2018 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 611 37.532 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 8.8E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 Pfam PF01434 Peptidase family M41 386 595 1.9E-82 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 Pfam PF06480 FtsH Extracellular 8 97 2.6E-11 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AMBLS11_08535 d3dff4c719265d0c28d7682d38444479 648 Gene3D G3DSA:2.40.50.920 26 103 8.0E-21 T 14-10-2018 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 Gene3D G3DSA:3.40.50.12740 3 208 2.7E-61 T 14-10-2018 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 2.1E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 SUPERFAMILY SSF46894 137 208 2.96E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 SMART SM00421 145 202 2.9E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 Pfam PF00072 Response regulator receiver domain 5 117 9.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 SMART SM00448 3 116 1.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16135 ccc46d3829ec11a0627de57281c83af3 209 SUPERFAMILY SSF52172 2 131 1.28E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_15525 6ee53c16522c8236bd19a5a34e35d0a4 365 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 2 364 43.292 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AMBLS11_15525 6ee53c16522c8236bd19a5a34e35d0a4 365 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 8 364 7.8E-169 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMBLS11_15525 6ee53c16522c8236bd19a5a34e35d0a4 365 Gene3D G3DSA:3.40.50.150 11 360 1.2E-132 T 14-10-2018 AMBLS11_15525 6ee53c16522c8236bd19a5a34e35d0a4 365 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 297 326 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site AMBLS11_15525 6ee53c16522c8236bd19a5a34e35d0a4 365 SUPERFAMILY SSF53335 8 363 9.73E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_15525 6ee53c16522c8236bd19a5a34e35d0a4 365 Gene3D G3DSA:3.40.1350.30 43 187 1.2E-132 T 14-10-2018 AMBLS11_15525 6ee53c16522c8236bd19a5a34e35d0a4 365 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 9 364 1.3E-166 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AMBLS11_15315 f1a35d9427cb5e99c34c4ea89c2d1330 382 Gene3D G3DSA:3.30.565.10 246 370 3.8E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15315 f1a35d9427cb5e99c34c4ea89c2d1330 382 SUPERFAMILY SSF55874 276 373 4.06E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15315 f1a35d9427cb5e99c34c4ea89c2d1330 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 368 1.8E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15315 f1a35d9427cb5e99c34c4ea89c2d1330 382 Pfam PF07730 Histidine kinase 177 239 5.4E-8 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SUPERFAMILY SSF55781 307 504 1.13E-29 T 14-10-2018 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SMART SM00388 527 592 7.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Pfam PF01590 GAF domain 155 312 1.6E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Gene3D G3DSA:3.30.565.10 593 753 1.2E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Gene3D G3DSA:3.40.50.2300 765 884 2.3E-20 T 14-10-2018 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SUPERFAMILY SSF55874 581 749 3.93E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SMART SM00387 638 751 7.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Pfam PF00072 Response regulator receiver domain 772 882 2.7E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SUPERFAMILY SSF55781 144 318 2.18E-49 T 14-10-2018 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Gene3D G3DSA:3.30.450.20 17 259 1.7E-126 T 14-10-2018 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Pfam PF08446 PAS fold 13 125 2.5E-10 T 14-10-2018 IPR013654 PAS fold-2 GO:0006355 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SUPERFAMILY SSF52172 769 883 3.42E-20 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Gene3D G3DSA:1.10.287.130 514 592 3.3E-17 T 14-10-2018 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 638 749 1.3E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SMART SM00065 154 333 0.0047 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 675 689 9.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 728 9.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 735 748 9.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SUPERFAMILY SSF55785 4 125 9.94E-21 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Pfam PF00360 Phytochrome region 340 506 1.8E-25 T 14-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Gene3D G3DSA:3.30.450.270 327 500 1.7E-126 T 14-10-2018 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Gene3D G3DSA:3.30.450.40 13 483 1.7E-126 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SMART SM00448 770 883 7.4E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 Pfam PF00512 His Kinase A (phospho-acceptor) domain 528 591 5.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_13680 0e49c9c0b229c339a1b760e7d9f8f5be 884 SUPERFAMILY SSF47384 514 593 3.92E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 Gene3D G3DSA:3.30.450.40 224 404 2.2E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 Gene3D G3DSA:3.30.450.40 26 206 5.4E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 SMART SM00065 249 401 1.0E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 SMART SM00065 51 202 0.0016 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 441 605 2.2E-40 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 Pfam PF13185 GAF domain 250 392 1.7E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 Pfam PF13185 GAF domain 52 190 3.2E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 SUPERFAMILY SSF141868 620 855 1.24E-58 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 Gene3D G3DSA:3.30.70.270 438 618 3.4E-61 T 14-10-2018 AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 SMART SM00267 432 605 3.1E-64 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 SUPERFAMILY SSF55781 233 412 2.01E-22 T 14-10-2018 AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 SUPERFAMILY SSF55781 17 193 3.49E-18 T 14-10-2018 AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 SUPERFAMILY SSF55073 448 607 2.98E-48 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 SMART SM00052 615 861 4.8E-50 T 14-10-2018 IPR001633 EAL domain AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 Gene3D G3DSA:3.20.20.450 619 865 1.7E-63 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 Pfam PF00563 EAL domain 621 853 6.4E-59 T 14-10-2018 IPR001633 EAL domain AMBLS11_00340 59583a913a3a3ccae6f063596833de5a 866 Pfam PF00990 Diguanylate cyclase, GGDEF domain 443 600 5.7E-50 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 Pfam PF00873 AcrB/AcrD/AcrF family 5 1029 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 SUPERFAMILY SSF82866 299 506 1.14E-33 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 Gene3D G3DSA:3.30.70.1440 675 871 1.8E-284 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 SUPERFAMILY SSF82693 42 127 2.62E-20 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 Gene3D G3DSA:3.30.70.1430 42 821 1.8E-284 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 Gene3D G3DSA:3.30.2090.10 189 280 1.8E-284 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1034 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 Gene3D G3DSA:1.20.1640.10 16 518 1.8E-284 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 Gene3D G3DSA:3.30.70.1430 570 674 1.8E-284 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 SUPERFAMILY SSF82714 192 274 4.32E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 SUPERFAMILY SSF82714 725 809 7.85E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 SUPERFAMILY SSF82693 155 333 9.94E-18 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 Gene3D G3DSA:1.20.1640.10 519 1026 1.8E-284 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 Gene3D G3DSA:3.30.2090.10 726 813 1.8E-284 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 Gene3D G3DSA:3.30.70.1320 135 333 1.8E-284 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.4E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 1.4E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.4E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.4E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.4E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.4E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.4E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 SUPERFAMILY SSF82866 808 1033 2.62E-52 T 14-10-2018 AMBLS11_01425 4705a0de2d24cfce82b5e9c5a89180d5 1035 SUPERFAMILY SSF82693 574 667 9.42E-7 T 14-10-2018 AMBLS11_04090 f193dc9da18708fb90de8014ccca1275 300 SUPERFAMILY SSF53474 40 294 2.9E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_04090 f193dc9da18708fb90de8014ccca1275 300 Gene3D G3DSA:3.40.50.1820 18 298 1.8E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 SUPERFAMILY SSF52317 7 204 2.94E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 Pfam PF01965 DJ-1/PfpI family 46 166 6.9E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 SUPERFAMILY SSF46689 276 326 4.3E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 Gene3D G3DSA:1.10.10.60 221 328 2.7E-29 T 14-10-2018 AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 SUPERFAMILY SSF46689 225 274 4.3E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 Gene3D G3DSA:3.40.50.880 1 213 1.4E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 Pfam PF12833 Helix-turn-helix domain 246 324 2.0E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 SMART SM00342 240 323 2.9E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 307 8.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMBLS11_10415 392d511a0589469d229907a82b6e939a 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 323 8.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 SUPERFAMILY SSF109604 417 541 3.77E-14 T 14-10-2018 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 SUPERFAMILY SSF55021 696 765 3.04E-8 T 14-10-2018 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 PIRSF PIRSF006288 9 880 2.8E-286 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 Pfam PF01909 Nucleotidyltransferase domain 72 116 1.7E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 37 872 5.5E-267 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 883 269.295 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 SMART SM00471 448 594 2.4E-6 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 SUPERFAMILY SSF81593 197 313 2.28E-5 T 14-10-2018 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 Pfam PF01966 HD domain 478 558 7.0E-11 T 14-10-2018 IPR006674 HD domain AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 SUPERFAMILY SSF55021 802 859 6.25E-6 T 14-10-2018 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 8.0E-34 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 SUPERFAMILY SSF81301 38 167 1.96E-16 T 14-10-2018 AMBLS11_04545 27bd24ff3eef25093e24b05be6747599 883 Gene3D G3DSA:1.10.3210.10 441 580 5.2E-9 T 14-10-2018 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 PRINTS PR00481 Cytosol aminopeptidase signature 209 230 7.8E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 PRINTS PR00481 Cytosol aminopeptidase signature 268 288 7.8E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 PRINTS PR00481 Cytosol aminopeptidase signature 187 204 7.8E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 PRINTS PR00481 Cytosol aminopeptidase signature 246 267 7.8E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 PRINTS PR00481 Cytosol aminopeptidase signature 296 311 7.8E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 Gene3D G3DSA:3.40.630.10 91 425 3.6E-104 T 14-10-2018 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 106 418 8.1E-99 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 Pfam PF12404 Peptidase 5 79 6.7E-23 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 272 279 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 PIRSF PIRSF036388 1 427 6.9E-176 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AMBLS11_16810 ef8d14d500b8dfe3772809d942d1b53a 427 SUPERFAMILY SSF53187 102 424 2.7E-98 T 14-10-2018 AMBLS11_01540 214e31527887b904763cf8410b11de42 121 Gene3D G3DSA:3.40.50.12740 1 121 1.8E-38 T 14-10-2018 AMBLS11_01540 214e31527887b904763cf8410b11de42 121 SMART SM00448 3 116 3.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01540 214e31527887b904763cf8410b11de42 121 Pfam PF00072 Response regulator receiver domain 5 115 7.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01540 214e31527887b904763cf8410b11de42 121 SUPERFAMILY SSF52172 3 121 6.26E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_12760 031d38c1896cf29a19eab07e5d1cedc6 239 Gene3D G3DSA:3.30.2310.10 157 234 1.4E-15 T 14-10-2018 AMBLS11_12760 031d38c1896cf29a19eab07e5d1cedc6 239 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 6 150 2.9E-40 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain AMBLS11_12760 031d38c1896cf29a19eab07e5d1cedc6 239 Pfam PF01980 Uncharacterised protein family UPF0066 24 145 4.9E-36 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain AMBLS11_12760 031d38c1896cf29a19eab07e5d1cedc6 239 SUPERFAMILY SSF118196 6 233 1.31E-67 T 14-10-2018 IPR036413 YaeB-like superfamily AMBLS11_12760 031d38c1896cf29a19eab07e5d1cedc6 239 Gene3D G3DSA:2.40.30.70 8 156 8.3E-43 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily AMBLS11_12730 2977407536d944da2eb10d565721b761 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 Gene3D G3DSA:3.40.50.300 313 490 3.7E-61 T 14-10-2018 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 9.4E-100 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 1.1E-55 T 14-10-2018 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 1.1E-55 T 14-10-2018 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 1.1E-55 T 14-10-2018 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 1.1E-55 T 14-10-2018 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 1.1E-55 T 14-10-2018 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 5.2E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 Gene3D G3DSA:1.20.58.1480 120 245 4.7E-45 T 14-10-2018 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 Gene3D G3DSA:1.10.8.60 491 584 1.3E-32 T 14-10-2018 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 SMART SM00464 10 202 4.7E-80 T 14-10-2018 IPR003111 Lon, substrate-binding domain AMBLS11_12730 2977407536d944da2eb10d565721b761 783 Hamap MF_01973 Lon protease [lon]. 11 772 72.109 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 SUPERFAMILY SSF54211 595 770 1.93E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_12730 2977407536d944da2eb10d565721b761 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 2.0E-42 T 14-10-2018 IPR003111 Lon, substrate-binding domain AMBLS11_12730 2977407536d944da2eb10d565721b761 783 SMART SM00382 348 492 8.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12730 2977407536d944da2eb10d565721b761 783 SUPERFAMILY SSF88697 10 201 1.24E-49 T 14-10-2018 IPR015947 PUA-like superfamily AMBLS11_12730 2977407536d944da2eb10d565721b761 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 Gene3D G3DSA:2.30.130.40 1 117 1.8E-36 T 14-10-2018 AMBLS11_12730 2977407536d944da2eb10d565721b761 783 SUPERFAMILY SSF52540 314 588 2.92E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12730 2977407536d944da2eb10d565721b761 783 Gene3D G3DSA:3.30.230.10 585 772 6.7E-86 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_14495 a5a1b264c03a48a5393a20c3a5b2756b 113 Pfam PF02021 Uncharacterised protein family UPF0102 9 101 3.0E-25 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMBLS11_14495 a5a1b264c03a48a5393a20c3a5b2756b 113 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 111 1.4E-20 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMBLS11_14495 a5a1b264c03a48a5393a20c3a5b2756b 113 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 113 18.099 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMBLS11_14495 a5a1b264c03a48a5393a20c3a5b2756b 113 SUPERFAMILY SSF52980 8 109 1.29E-21 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMBLS11_14495 a5a1b264c03a48a5393a20c3a5b2756b 113 Gene3D G3DSA:3.40.1350.10 8 113 9.1E-27 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 SMART SM00710 261 304 1000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 SMART SM00710 125 156 260.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 SMART SM00710 238 260 1600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 SMART SM00710 158 185 2800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 Gene3D G3DSA:2.60.120.260 390 508 2.9E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 SUPERFAMILY SSF51126 27 350 8.03E-73 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 Pfam PF00544 Pectate lyase 67 271 5.8E-36 T 14-10-2018 IPR002022 Pectate lyase AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 Gene3D G3DSA:2.160.20.10 25 349 2.1E-100 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 SMART SM00656 67 277 6.6E-24 T 14-10-2018 IPR002022 Pectate lyase AMBLS11_04060 a2a8b70c8eb299d17cdb9c404c0b2cb4 509 SUPERFAMILY SSF49785 389 507 2.21E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 PRINTS PR00605 Class IC cytochrome C signature 289 311 1.6E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 PRINTS PR00605 Class IC cytochrome C signature 245 256 1.6E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 82 4.9E-23 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 SUPERFAMILY SSF46626 55 233 6.16E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 149 224 4.5E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 237 311 1.4E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 Gene3D G3DSA:1.20.58.1490 1 93 3.1E-32 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 Gene3D G3DSA:1.10.760.10 205 291 2.1E-74 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 Gene3D G3DSA:1.10.760.10 126 314 2.1E-74 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 SUPERFAMILY SSF46626 233 316 7.27E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 316 7.3E-64 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AMBLS11_09525 d9c00ccd26807203bdb51824fa4fd2a3 317 PIRSF PIRSF000006 1 317 4.6E-103 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AMBLS11_12905 4b03e9d705c7ed50e97e3e841cd86788 418 SUPERFAMILY SSF101960 14 412 6.54E-88 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AMBLS11_12905 4b03e9d705c7ed50e97e3e841cd86788 418 Pfam PF01458 Uncharacterized protein family (UPF0051) 166 387 9.3E-57 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMBLS11_12905 4b03e9d705c7ed50e97e3e841cd86788 418 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 402 1.9E-67 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 Gene3D G3DSA:3.50.50.60 5 337 9.4E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 Pfam PF01494 FAD binding domain 4 345 1.3E-30 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 SUPERFAMILY SSF51905 3 382 1.85E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 293 306 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 6.1E-21 T 14-10-2018 AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 6.1E-21 T 14-10-2018 AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 6.1E-21 T 14-10-2018 AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 6.1E-21 T 14-10-2018 AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 Gene3D G3DSA:3.30.9.50 79 268 9.4E-116 T 14-10-2018 AMBLS11_13830 b84813bf75f05163a4fe7f220559fcc2 390 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 389 2.0E-132 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AMBLS11_17595 b3cd1c978981846bd26ec5a75e92afcc 140 Pfam PF14534 Domain of unknown function (DUF4440) 5 125 9.4E-9 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 AMBLS11_17595 b3cd1c978981846bd26ec5a75e92afcc 140 Gene3D G3DSA:3.10.450.50 2 140 1.3E-23 T 14-10-2018 AMBLS11_17595 b3cd1c978981846bd26ec5a75e92afcc 140 SUPERFAMILY SSF54427 4 136 6.64E-17 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_18595 b2a0bcf0efc78e375eef7176755424d8 214 Pfam PF02630 SCO1/SenC 42 186 1.3E-32 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18595 b2a0bcf0efc78e375eef7176755424d8 214 Gene3D G3DSA:3.40.30.10 30 207 1.8E-43 T 14-10-2018 AMBLS11_18595 b2a0bcf0efc78e375eef7176755424d8 214 SUPERFAMILY SSF52833 43 195 3.1E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 Gene3D G3DSA:3.40.50.720 1 245 1.4E-86 T 14-10-2018 AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 2.1E-4 T 14-10-2018 AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 244 4.3E-103 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.8E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.8E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.8E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.8E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.8E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.8E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 3.6E-69 T 14-10-2018 AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 SUPERFAMILY SSF51735 5 245 1.3E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07895 c7953ca73831d59e3a9453d7c1768732 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 SMART SM00448 1 114 3.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 Gene3D G3DSA:3.40.50.12740 1 203 3.9E-49 T 14-10-2018 AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 SMART SM00421 140 197 3.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 SUPERFAMILY SSF46894 138 204 7.14E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 Pfam PF00072 Response regulator receiver domain 3 114 3.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 2.0E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15405 f7ba16d819034497c5c3cae225e8e1bb 218 SUPERFAMILY SSF52172 1 126 6.4E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_00590 1ff180d84d5644ad7449360bf1a1678f 636 SUPERFAMILY SSF55073 212 364 1.57E-37 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_00590 1ff180d84d5644ad7449360bf1a1678f 636 Pfam PF00563 EAL domain 384 618 1.2E-69 T 14-10-2018 IPR001633 EAL domain AMBLS11_00590 1ff180d84d5644ad7449360bf1a1678f 636 Gene3D G3DSA:3.20.20.450 381 634 2.2E-85 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00590 1ff180d84d5644ad7449360bf1a1678f 636 SMART SM00267 196 368 7.3E-42 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00590 1ff180d84d5644ad7449360bf1a1678f 636 SUPERFAMILY SSF141868 385 630 2.22E-79 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00590 1ff180d84d5644ad7449360bf1a1678f 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 204 362 4.6E-31 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00590 1ff180d84d5644ad7449360bf1a1678f 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 362 5.1E-35 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00590 1ff180d84d5644ad7449360bf1a1678f 636 Gene3D G3DSA:3.30.70.270 202 380 3.5E-44 T 14-10-2018 AMBLS11_00590 1ff180d84d5644ad7449360bf1a1678f 636 SMART SM00052 378 623 2.8E-85 T 14-10-2018 IPR001633 EAL domain AMBLS11_13650 caf749a32b66ebad4de95b30c53f7792 241 Pfam PF01797 Transposase IS200 like 14 123 1.6E-16 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AMBLS11_13650 caf749a32b66ebad4de95b30c53f7792 241 Gene3D G3DSA:3.30.70.1290 1 153 8.6E-38 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AMBLS11_13650 caf749a32b66ebad4de95b30c53f7792 241 SUPERFAMILY SSF143422 3 128 1.83E-32 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AMBLS11_13650 caf749a32b66ebad4de95b30c53f7792 241 SMART SM01321 9 125 2.8E-42 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AMBLS11_05245 59a8ac14c106ecbf7d5516f5eeacee2b 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 139 158 2.9E-10 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMBLS11_05245 59a8ac14c106ecbf7d5516f5eeacee2b 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 211 230 2.9E-10 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMBLS11_05245 59a8ac14c106ecbf7d5516f5eeacee2b 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 75 97 2.9E-10 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMBLS11_05245 59a8ac14c106ecbf7d5516f5eeacee2b 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 179 197 2.9E-10 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMBLS11_05245 59a8ac14c106ecbf7d5516f5eeacee2b 266 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 256 9.6E-104 T 14-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AMBLS11_05245 59a8ac14c106ecbf7d5516f5eeacee2b 266 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 118 129 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMBLS11_05245 59a8ac14c106ecbf7d5516f5eeacee2b 266 SUPERFAMILY SSF56534 4 248 1.1E-98 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily AMBLS11_05245 59a8ac14c106ecbf7d5516f5eeacee2b 266 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 7 232 1.3E-49 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMBLS11_05245 59a8ac14c106ecbf7d5516f5eeacee2b 266 Gene3D G3DSA:1.10.800.10 1 266 1.0E-100 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 Pfam PF04539 Sigma-70 region 3 172 247 7.2E-23 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 SUPERFAMILY SSF88659 165 239 3.84E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 Gene3D G3DSA:1.10.10.10 243 317 3.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 SUPERFAMILY SSF88659 222 320 7.1E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 116 129 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 Gene3D G3DSA:1.10.10.10 165 240 2.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 Gene3D G3DSA:1.10.601.10 13 161 1.0E-45 T 14-10-2018 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 PRINTS PR00046 Major sigma-70 factor signature 264 276 9.6E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 PRINTS PR00046 Major sigma-70 factor signature 285 300 9.6E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 PRINTS PR00046 Major sigma-70 factor signature 300 311 9.6E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 PRINTS PR00046 Major sigma-70 factor signature 116 129 9.6E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 PRINTS PR00046 Major sigma-70 factor signature 140 148 9.6E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 Pfam PF00140 Sigma-70 factor, region 1.2 54 84 5.6E-10 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 Pfam PF04542 Sigma-70 region 2 93 161 2.0E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 326 3.7E-139 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 326 39.516 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 Pfam PF04545 Sigma-70, region 4 260 313 5.4E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 89 315 2.7E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 285 311 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_02635 4a16779ed72052ad855e84a09d32cbe0 330 SUPERFAMILY SSF88946 54 162 3.14E-44 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 Gene3D G3DSA:3.50.50.60 480 636 3.2E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 Gene3D G3DSA:3.20.20.70 10 377 2.5E-129 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 Gene3D G3DSA:3.40.50.720 383 674 3.2E-109 T 14-10-2018 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 630 644 2.6E-6 T 14-10-2018 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 384 406 2.6E-6 T 14-10-2018 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 486 4.7E-18 T 14-10-2018 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 629 645 4.7E-18 T 14-10-2018 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 508 526 4.7E-18 T 14-10-2018 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 404 4.7E-18 T 14-10-2018 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 SUPERFAMILY SSF51971 341 527 1.05E-39 T 14-10-2018 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 383 651 1.5E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 SUPERFAMILY SSF51905 478 638 1.94E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 SUPERFAMILY SSF51395 10 370 5.36E-115 T 14-10-2018 AMBLS11_11615 6c5ed81ecfb5e4fef112d173a895a5b3 680 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 14 339 1.7E-88 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMBLS11_15090 3042b72bd7daa2fdb12aa98d13b685ec 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 125 7.8E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_15090 3042b72bd7daa2fdb12aa98d13b685ec 336 SMART SM00829 12 334 6.6E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_15090 3042b72bd7daa2fdb12aa98d13b685ec 336 SUPERFAMILY SSF50129 1 170 8.37E-32 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_15090 3042b72bd7daa2fdb12aa98d13b685ec 336 Pfam PF00107 Zinc-binding dehydrogenase 171 297 3.4E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMBLS11_15090 3042b72bd7daa2fdb12aa98d13b685ec 336 Gene3D G3DSA:3.90.180.10 20 323 1.0E-96 T 14-10-2018 AMBLS11_15090 3042b72bd7daa2fdb12aa98d13b685ec 336 SUPERFAMILY SSF51735 137 310 4.6E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15090 3042b72bd7daa2fdb12aa98d13b685ec 336 Gene3D G3DSA:3.40.50.720 142 284 1.0E-96 T 14-10-2018 AMBLS11_13180 8d6224a78e08b07fc72371194a4192ed 304 TIGRFAM TIGR02602 8TM_EpsH: exosortase 1 115 4.9E-37 T 14-10-2018 IPR013426 Exosortase, EpsH-like AMBLS11_13180 8d6224a78e08b07fc72371194a4192ed 304 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 2 114 5.5E-26 T 14-10-2018 IPR019127 Exosortase AMBLS11_13180 8d6224a78e08b07fc72371194a4192ed 304 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 22 113 1.1E-18 T 14-10-2018 IPR026392 Exosortase/Archaeosortase domain AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 SUPERFAMILY SSF51735 3 218 4.08E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 6.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 6.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 Pfam PF00106 short chain dehydrogenase 3 197 6.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08590 c8f40c845bc68b60874f48d85c0cc161 234 Gene3D G3DSA:3.40.50.720 2 234 1.1E-62 T 14-10-2018 AMBLS11_04480 51318919e2d84f0740ab336c62490e51 286 SUPERFAMILY SSF55620 190 270 2.59E-9 T 14-10-2018 AMBLS11_04480 51318919e2d84f0740ab336c62490e51 286 Pfam PF14489 QueF-like protein 200 275 3.3E-28 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMBLS11_04480 51318919e2d84f0740ab336c62490e51 286 TIGRFAM TIGR03138 QueF: queuine synthase 16 286 1.7E-123 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMBLS11_04480 51318919e2d84f0740ab336c62490e51 286 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 26 136 3.0E-46 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMBLS11_04480 51318919e2d84f0740ab336c62490e51 286 Gene3D G3DSA:3.30.1130.10 149 286 3.1E-59 T 14-10-2018 AMBLS11_04480 51318919e2d84f0740ab336c62490e51 286 Gene3D G3DSA:3.30.1130.10 26 144 6.5E-42 T 14-10-2018 AMBLS11_04480 51318919e2d84f0740ab336c62490e51 286 PIRSF PIRSF004750 11 286 1.5E-121 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMBLS11_04480 51318919e2d84f0740ab336c62490e51 286 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 286 147.48 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMBLS11_02370 e43d7809a7f379aa221958a64033baa6 702 Pfam PF00326 Prolyl oligopeptidase family 488 696 6.4E-52 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_02370 e43d7809a7f379aa221958a64033baa6 702 Gene3D G3DSA:2.120.10.30 263 436 3.1E-16 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_02370 e43d7809a7f379aa221958a64033baa6 702 Gene3D G3DSA:2.120.10.30 39 210 1.2E-15 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_02370 e43d7809a7f379aa221958a64033baa6 702 Gene3D G3DSA:3.40.50.1820 449 701 2.7E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_02370 e43d7809a7f379aa221958a64033baa6 702 SUPERFAMILY SSF53474 448 695 9.14E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_02370 e43d7809a7f379aa221958a64033baa6 702 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 211 302 2.0E-9 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AMBLS11_02370 e43d7809a7f379aa221958a64033baa6 702 SUPERFAMILY SSF82171 66 442 3.79E-43 T 14-10-2018 AMBLS11_15185 9ac3c7c3fe39231dd43346f580525a76 401 Gene3D G3DSA:3.40.350.10 2 169 3.1E-41 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMBLS11_15185 9ac3c7c3fe39231dd43346f580525a76 401 Gene3D G3DSA:3.90.230.10 170 400 3.3E-72 T 14-10-2018 AMBLS11_15185 9ac3c7c3fe39231dd43346f580525a76 401 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 331 343 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AMBLS11_15185 9ac3c7c3fe39231dd43346f580525a76 401 Pfam PF00557 Metallopeptidase family M24 179 385 1.1E-54 T 14-10-2018 IPR000994 Peptidase M24 AMBLS11_15185 9ac3c7c3fe39231dd43346f580525a76 401 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 170 3.3E-16 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AMBLS11_15185 9ac3c7c3fe39231dd43346f580525a76 401 SUPERFAMILY SSF55920 173 393 1.03E-67 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMBLS11_15185 9ac3c7c3fe39231dd43346f580525a76 401 SUPERFAMILY SSF53092 17 169 5.58E-22 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 SMART SM00388 309 374 3.5E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Gene3D G3DSA:3.30.450.40 5 166 5.5E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 535 3.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 2.3E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.3E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.3E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 2.3E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Gene3D G3DSA:1.10.287.130 286 372 5.7E-24 T 14-10-2018 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 SUPERFAMILY SSF55874 363 533 8.91E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 SUPERFAMILY SSF55781 18 164 2.07E-16 T 14-10-2018 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 SUPERFAMILY SSF55785 181 288 8.72E-15 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 SUPERFAMILY SSF47384 296 376 3.53E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Gene3D G3DSA:3.30.565.10 373 540 6.5E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 SUPERFAMILY SSF52172 564 697 4.98E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Pfam PF01590 GAF domain 23 153 3.7E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 SMART SM00387 421 537 1.7E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Pfam PF00072 Response regulator receiver domain 567 683 8.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 374 7.9E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Pfam PF08447 PAS fold 199 282 6.7E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Gene3D G3DSA:3.30.450.20 168 285 5.2E-18 T 14-10-2018 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 SMART SM00448 564 683 1.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 Gene3D G3DSA:3.40.50.2300 553 694 2.0E-42 T 14-10-2018 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 SMART SM00065 17 163 9.0E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_16420 9e1824796670a24c9cff6fc95504787c 702 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 178 289 7.2E-6 T 14-10-2018 IPR000014 PAS domain AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 SMART SM00937 67 180 1.6E-71 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 Pfam PF00472 RF-1 domain 216 323 2.8E-43 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 Gene3D G3DSA:3.30.70.1660 113 344 1.8E-98 T 14-10-2018 AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 SUPERFAMILY SSF75620 12 355 6.54E-143 T 14-10-2018 AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 Gene3D G3DSA:3.30.160.20 212 299 1.8E-98 T 14-10-2018 AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 Pfam PF03462 PCRF domain 13 205 2.2E-78 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 Gene3D G3DSA:1.20.58.410 3 104 7.0E-10 T 14-10-2018 AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 1.3E-174 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMBLS11_06900 a1881b71d27cbf4333a13bd34a094dbe 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 42.511 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Gene3D G3DSA:3.40.50.300 493 1005 2.6E-232 T 14-10-2018 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 156 1096 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SUPERFAMILY SSF52540 798 1005 3.7E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SUPERFAMILY SSF52540 360 481 2.28E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Gene3D G3DSA:2.30.30.840 498 556 2.6E-232 T 14-10-2018 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Pfam PF03461 TRCF domain 1024 1115 2.1E-28 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SUPERFAMILY SSF52540 18 350 1.49E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Gene3D G3DSA:3.40.50.300 557 796 2.6E-232 T 14-10-2018 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Pfam PF02559 CarD-like/TRCF domain 495 590 2.4E-24 T 14-10-2018 IPR003711 CarD-like/TRCF domain AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Gene3D G3DSA:3.40.50.11140 365 467 2.5E-11 T 14-10-2018 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Gene3D G3DSA:3.90.1150.50 1019 1164 1.7E-45 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SMART SM00490 841 925 6.8E-16 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SUPERFAMILY SSF52540 538 798 1.42E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SMART SM00487 615 805 5.7E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SMART SM00982 1023 1123 5.4E-49 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SUPERFAMILY SSF141259 485 561 1.44E-22 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1145 27.747 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Pfam PF00271 Helicase conserved C-terminal domain 822 924 1.6E-15 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SUPERFAMILY SSF143517 1011 1161 2.48E-41 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Gene3D G3DSA:3.30.2060.10 139 224 4.3E-119 T 14-10-2018 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Pfam PF00270 DEAD/DEAH box helicase 620 780 1.1E-20 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 SMART SM01058 494 591 5.5E-46 T 14-10-2018 IPR003711 CarD-like/TRCF domain AMBLS11_07535 aff374f5c22729a0944d7f47e8e8d89a 1165 Gene3D G3DSA:3.40.50.11180 30 344 4.3E-119 T 14-10-2018 AMBLS11_05115 6370db776a99c9c3d14413e8a1ee1acb 94 Gene3D G3DSA:2.60.120.10 1 94 4.7E-33 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_05115 6370db776a99c9c3d14413e8a1ee1acb 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 3.5E-33 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AMBLS11_05115 6370db776a99c9c3d14413e8a1ee1acb 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 23.627 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AMBLS11_05115 6370db776a99c9c3d14413e8a1ee1acb 94 SUPERFAMILY SSF51182 3 93 3.18E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_15885 6d36536a4c76455f632862aa4b54f2a5 335 Gene3D G3DSA:3.40.50.2300 164 296 1.6E-58 T 14-10-2018 AMBLS11_15885 6d36536a4c76455f632862aa4b54f2a5 335 SMART SM00354 8 78 4.1E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_15885 6d36536a4c76455f632862aa4b54f2a5 335 Gene3D G3DSA:3.40.50.2300 70 312 1.6E-58 T 14-10-2018 AMBLS11_15885 6d36536a4c76455f632862aa4b54f2a5 335 Pfam PF13377 Periplasmic binding protein-like domain 175 334 2.5E-28 T 14-10-2018 AMBLS11_15885 6d36536a4c76455f632862aa4b54f2a5 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 5.3E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_15885 6d36536a4c76455f632862aa4b54f2a5 335 Gene3D G3DSA:1.10.260.40 1 65 1.1E-18 T 14-10-2018 AMBLS11_15885 6d36536a4c76455f632862aa4b54f2a5 335 SUPERFAMILY SSF47413 8 65 6.26E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_15885 6d36536a4c76455f632862aa4b54f2a5 335 SUPERFAMILY SSF53822 67 334 5.35E-54 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_15565 63e9ffec43a38ecade47b7e53c4eb752 247 Gene3D G3DSA:3.40.50.620 6 215 4.4E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_15565 63e9ffec43a38ecade47b7e53c4eb752 247 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 12 242 38.445 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMBLS11_15565 63e9ffec43a38ecade47b7e53c4eb752 247 SUPERFAMILY SSF52402 22 207 3.21E-54 T 14-10-2018 AMBLS11_15565 63e9ffec43a38ecade47b7e53c4eb752 247 PIRSF PIRSF000857 1 245 9.3E-58 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMBLS11_15565 63e9ffec43a38ecade47b7e53c4eb752 247 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 20 241 3.4E-86 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AMBLS11_15565 63e9ffec43a38ecade47b7e53c4eb752 247 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 47 218 4.1E-50 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMBLS11_15565 63e9ffec43a38ecade47b7e53c4eb752 247 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 32 242 6.1E-82 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 SUPERFAMILY SSF50814 14 177 3.74E-49 T 14-10-2018 IPR012674 Calycin AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 14-10-2018 IPR022272 Lipocalin family conserved site AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 PIRSF PIRSF036893 1 179 4.9E-45 T 14-10-2018 IPR022271 Lipocalin, ApoD type AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 Gene3D G3DSA:2.40.128.20 11 176 2.3E-51 T 14-10-2018 IPR012674 Calycin AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 Pfam PF08212 Lipocalin-like domain 35 174 1.9E-46 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 PRINTS PR01171 Bacterial lipocalin signature 34 48 1.5E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 PRINTS PR01171 Bacterial lipocalin signature 70 79 1.5E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 PRINTS PR01171 Bacterial lipocalin signature 104 118 1.5E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 PRINTS PR01171 Bacterial lipocalin signature 137 148 1.5E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 PRINTS PR01171 Bacterial lipocalin signature 121 129 1.5E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 PRINTS PR01171 Bacterial lipocalin signature 51 67 1.5E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMBLS11_17105 380627646dc7ca66a5e4443fb5ebbec6 180 PRINTS PR01171 Bacterial lipocalin signature 164 174 1.5E-38 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 434 20.367 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 Gene3D G3DSA:3.30.565.10 1 211 4.0E-72 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 122 1.4E-14 T 14-10-2018 AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 SMART SM01340 211 329 2.3E-47 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 328 5.7E-34 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 SUPERFAMILY SSF54211 201 328 2.35E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 Gene3D G3DSA:3.30.230.10 216 328 8.2E-34 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 SUPERFAMILY SSF55874 2 203 4.45E-54 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_17305 2205d67f4ae4708b734f432eec70fd0a 434 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 309 2.4E-99 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 AMBLS11_11490 2c6f28f04954ee6e222def100a11462c 1559 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 53 125 3.6E-27 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal AMBLS11_11490 2c6f28f04954ee6e222def100a11462c 1559 Gene3D G3DSA:1.20.58.2200 1497 1559 1.4E-17 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily AMBLS11_11490 2c6f28f04954ee6e222def100a11462c 1559 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1515 1558 1.3E-16 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 Pfam PF00258 Flavodoxin 43 168 2.0E-26 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 SUPERFAMILY SSF52343 330 465 6.29E-24 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 SUPERFAMILY SSF52218 39 169 1.48E-33 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 358 367 7.9E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 401 417 7.9E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 333 352 7.9E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 424 432 7.9E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 269 276 7.9E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 Pfam PF00175 Oxidoreductase NAD-binding domain 334 438 1.7E-7 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 PRINTS PR00369 Flavodoxin signature 124 134 6.9E-12 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 PRINTS PR00369 Flavodoxin signature 148 167 6.9E-12 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 PRINTS PR00369 Flavodoxin signature 42 55 6.9E-12 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 PRINTS PR00369 Flavodoxin signature 89 100 6.9E-12 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 SUPERFAMILY SSF63380 246 313 5.77E-7 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 Gene3D G3DSA:3.40.50.80 324 465 3.2E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 14-10-2018 IPR010916 TonB box, conserved site AMBLS11_16905 41c6ef38b36192a4b2c337a8c4a042c7 465 Gene3D G3DSA:3.40.50.360 20 176 3.2E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_03915 ee709d8951e56cdf2fcacd148a95bebb 146 SUPERFAMILY SSF46785 2 143 5.13E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_03915 ee709d8951e56cdf2fcacd148a95bebb 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_03915 ee709d8951e56cdf2fcacd148a95bebb 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 1.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_03915 ee709d8951e56cdf2fcacd148a95bebb 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_03915 ee709d8951e56cdf2fcacd148a95bebb 146 SMART SM00347 28 127 3.2E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_03915 ee709d8951e56cdf2fcacd148a95bebb 146 Pfam PF01047 MarR family 35 92 2.1E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_03915 ee709d8951e56cdf2fcacd148a95bebb 146 Gene3D G3DSA:1.10.10.10 2 138 4.3E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03915 ee709d8951e56cdf2fcacd148a95bebb 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 101 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Gene3D G3DSA:1.25.40.10 651 729 1.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Gene3D G3DSA:1.25.40.10 30 103 5.6E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Gene3D G3DSA:1.25.40.10 464 650 3.4E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SUPERFAMILY SSF48452 36 118 4.67E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Gene3D G3DSA:1.25.40.10 839 937 4.9E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 312 345 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 516 549 240.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 720 753 0.0037 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 824 856 330.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 857 890 410.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 202 235 0.02 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 168 201 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 891 924 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 236 269 270.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 482 515 0.083 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 32 65 53.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 550 583 65.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SMART SM00028 618 651 280.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SUPERFAMILY SSF48452 303 470 9.49E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SUPERFAMILY SSF48452 451 762 1.52E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Gene3D G3DSA:1.25.40.10 730 838 3.0E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Pfam PF14559 Tetratricopeptide repeat 213 272 2.0E-8 T 14-10-2018 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Pfam PF14559 Tetratricopeptide repeat 870 934 6.4E-6 T 14-10-2018 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 24 918 2.7E-112 T 14-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Pfam PF13432 Tetratricopeptide repeat 325 374 9.0E-4 T 14-10-2018 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SUPERFAMILY SSF81901 720 920 2.14E-17 T 14-10-2018 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 SUPERFAMILY SSF48452 135 272 4.78E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Gene3D G3DSA:1.25.40.10 314 463 2.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Gene3D G3DSA:1.25.40.10 113 293 5.4E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Pfam PF13181 Tetratricopeptide repeat 482 513 0.0064 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12060 bcc903b2558e86c38d51b1e3950a6836 937 Pfam PF13181 Tetratricopeptide repeat 727 751 2.7E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 6.4E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 6.4E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 6.4E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 Gene3D G3DSA:2.60.410.10 284 374 4.4E-26 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 SUPERFAMILY SSF56601 14 284 1.82E-83 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 SUPERFAMILY SSF69189 284 376 6.67E-24 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 264 6.2E-87 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 374 4.8E-22 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 Gene3D G3DSA:3.40.710.10 22 282 5.1E-93 T 14-10-2018 AMBLS11_08450 4b07e9cfde975fe20b3da58cf4fd450a 394 SMART SM00936 284 374 2.4E-31 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Gene3D G3DSA:1.50.10.140 1357 1515 1.1E-11 T 14-10-2018 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 SUPERFAMILY SSF74650 2056 2321 5.34E-69 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Gene3D G3DSA:2.70.98.40 2059 2353 6.2E-81 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Gene3D G3DSA:2.70.98.40 1542 1844 2.6E-64 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Pfam PF10091 Putative glucoamylase 1299 1504 7.9E-14 T 14-10-2018 IPR019282 Domain of unknown function DUF2329 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Gene3D G3DSA:1.50.10.10 2363 2779 1.6E-172 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 SMART SM01068 1532 1593 1.7E-15 T 14-10-2018 IPR009342 Putative carbohydrate binding domain AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 SMART SM01068 2056 2121 4.7E-27 T 14-10-2018 IPR009342 Putative carbohydrate binding domain AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2349 2779 8.3E-102 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Gene3D G3DSA:1.50.10.140 988 1133 7.9E-13 T 14-10-2018 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 SUPERFAMILY SSF74650 1551 1814 1.73E-58 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 SUPERFAMILY SSF48208 2335 2815 1.84E-74 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Pfam PF06165 Glycosyltransferase family 36 1557 1811 7.4E-60 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Pfam PF06165 Glycosyltransferase family 36 2079 2319 4.3E-68 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 AMBLS11_15010 d45552d98e00864ff62261628b67f4f5 2877 Gene3D G3DSA:2.60.420.10 2358 2821 1.6E-172 T 14-10-2018 AMBLS11_09750 6e0fcebe73df9503892093bd3f80ab91 294 Pfam PF03466 LysR substrate binding domain 90 278 9.9E-11 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_09750 6e0fcebe73df9503892093bd3f80ab91 294 SUPERFAMILY SSF46785 2 107 1.09E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_09750 6e0fcebe73df9503892093bd3f80ab91 294 SUPERFAMILY SSF53850 90 280 7.78E-18 T 14-10-2018 AMBLS11_09750 6e0fcebe73df9503892093bd3f80ab91 294 Gene3D G3DSA:1.10.10.10 1 92 5.3E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_09750 6e0fcebe73df9503892093bd3f80ab91 294 Gene3D G3DSA:3.40.190.290 93 277 2.1E-16 T 14-10-2018 AMBLS11_09750 6e0fcebe73df9503892093bd3f80ab91 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.7E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_00310 1c81c1bc6455b132f77a62eb4629628d 288 SUPERFAMILY SSF144091 98 280 4.58E-36 T 14-10-2018 AMBLS11_00310 1c81c1bc6455b132f77a62eb4629628d 288 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 5 77 9.3E-17 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AMBLS11_00310 1c81c1bc6455b132f77a62eb4629628d 288 Gene3D G3DSA:1.20.1540.10 96 282 2.6E-47 T 14-10-2018 IPR035952 Rhomboid-like superfamily AMBLS11_00310 1c81c1bc6455b132f77a62eb4629628d 288 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 5 279 6.6E-84 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AMBLS11_00310 1c81c1bc6455b132f77a62eb4629628d 288 Pfam PF01694 Rhomboid family 137 280 3.5E-24 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMBLS11_04570 ad85e95f212c32e9eb4ea53747014805 185 SUPERFAMILY SSF55194 3 184 5.1E-69 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AMBLS11_04570 ad85e95f212c32e9eb4ea53747014805 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.881 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AMBLS11_04570 ad85e95f212c32e9eb4ea53747014805 185 Gene3D G3DSA:3.30.1360.40 31 105 1.2E-65 T 14-10-2018 AMBLS11_04570 ad85e95f212c32e9eb4ea53747014805 185 Gene3D G3DSA:1.10.132.20 12 182 1.2E-65 T 14-10-2018 AMBLS11_04570 ad85e95f212c32e9eb4ea53747014805 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 9.3E-73 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AMBLS11_04570 ad85e95f212c32e9eb4ea53747014805 185 Pfam PF01765 Ribosome recycling factor 20 183 6.3E-61 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AMBLS11_14200 ecf67fb9b57be57ba79d49d4593a5e3f 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 10 138 6.1E-51 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMBLS11_14200 ecf67fb9b57be57ba79d49d4593a5e3f 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 7 142 24.413 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMBLS11_14200 ecf67fb9b57be57ba79d49d4593a5e3f 143 Pfam PF03652 Holliday junction resolvase 8 137 1.7E-41 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMBLS11_14200 ecf67fb9b57be57ba79d49d4593a5e3f 143 SUPERFAMILY SSF53098 8 138 1.37E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_14200 ecf67fb9b57be57ba79d49d4593a5e3f 143 SMART SM00732 7 107 1.7E-40 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AMBLS11_14200 ecf67fb9b57be57ba79d49d4593a5e3f 143 Gene3D G3DSA:3.30.420.140 5 142 1.4E-43 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AMBLS11_07845 d8ee1a3b585e8a596fb2f155a689453e 378 SMART SM00587 150 313 7.7E-6 T 14-10-2018 IPR015897 CHK kinase-like AMBLS11_07845 d8ee1a3b585e8a596fb2f155a689453e 378 SUPERFAMILY SSF56112 119 342 2.77E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_07845 d8ee1a3b585e8a596fb2f155a689453e 378 Gene3D G3DSA:3.90.1200.10 162 306 6.0E-7 T 14-10-2018 AMBLS11_07845 d8ee1a3b585e8a596fb2f155a689453e 378 Pfam PF02958 Ecdysteroid kinase 228 311 2.8E-12 T 14-10-2018 IPR004119 Protein of unknown function DUF227 AMBLS11_07845 d8ee1a3b585e8a596fb2f155a689453e 378 Pfam PF02958 Ecdysteroid kinase 111 191 3.0E-7 T 14-10-2018 IPR004119 Protein of unknown function DUF227 AMBLS11_02575 b0e57fddfdf17433ef9019d0abb7f64a 317 TIGRFAM TIGR02249 integrase_gron: integron integrase 2 315 1.5E-140 T 14-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 AMBLS11_02575 b0e57fddfdf17433ef9019d0abb7f64a 317 Gene3D G3DSA:1.10.443.10 90 305 2.9E-68 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_02575 b0e57fddfdf17433ef9019d0abb7f64a 317 SUPERFAMILY SSF56349 96 311 1.15E-44 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_02575 b0e57fddfdf17433ef9019d0abb7f64a 317 Gene3D G3DSA:1.10.150.130 1 89 6.2E-26 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_02575 b0e57fddfdf17433ef9019d0abb7f64a 317 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 2 82 2.0E-23 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMBLS11_02575 b0e57fddfdf17433ef9019d0abb7f64a 317 Pfam PF00589 Phage integrase family 100 302 1.5E-41 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 698 30.302 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 Gene3D G3DSA:3.40.50.150 170 369 2.5E-119 T 14-10-2018 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 SUPERFAMILY SSF53335 393 694 8.81E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 Pfam PF01170 Putative RNA methylase family UPF0020 163 372 1.4E-45 T 14-10-2018 IPR000241 Putative RNA methylase domain AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 SMART SM00981 57 155 5.5E-16 T 14-10-2018 IPR004114 THUMP domain GO:0003723 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 Gene3D G3DSA:3.30.750.80 390 481 3.2E-34 T 14-10-2018 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 SUPERFAMILY SSF53335 141 376 6.31E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 Pfam PF02926 THUMP domain 37 154 5.2E-12 T 14-10-2018 IPR004114 THUMP domain GO:0003723 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 Gene3D G3DSA:3.30.2130.30 6 254 2.5E-119 T 14-10-2018 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 471 648 1.2E-23 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 PIRSF PIRSF037618 1 698 8.4E-280 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AMBLS11_09390 a124cb9e45f247a99a0cd6fab490006c 698 Gene3D G3DSA:3.40.50.150 482 697 4.1E-75 T 14-10-2018 AMBLS11_02740 093232c6f78899b04b7557585e82f5d2 324 SMART SM00267 151 323 3.9E-63 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_02740 093232c6f78899b04b7557585e82f5d2 324 Pfam PF08448 PAS fold 24 144 3.5E-5 T 14-10-2018 IPR013656 PAS fold-4 AMBLS11_02740 093232c6f78899b04b7557585e82f5d2 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 159 322 1.3E-55 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_02740 093232c6f78899b04b7557585e82f5d2 324 SUPERFAMILY SSF55785 12 108 3.81E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_02740 093232c6f78899b04b7557585e82f5d2 324 Gene3D G3DSA:3.30.70.270 151 324 3.0E-59 T 14-10-2018 AMBLS11_02740 093232c6f78899b04b7557585e82f5d2 324 SUPERFAMILY SSF55073 167 323 8.63E-52 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_02740 093232c6f78899b04b7557585e82f5d2 324 Gene3D G3DSA:3.30.450.20 7 147 3.2E-34 T 14-10-2018 AMBLS11_02740 093232c6f78899b04b7557585e82f5d2 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 163 319 1.8E-48 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_01145 40c47863bb6f32ec457fb73604ea526a 313 SUPERFAMILY SSF56349 35 313 1.44E-16 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_01145 40c47863bb6f32ec457fb73604ea526a 313 Gene3D G3DSA:1.10.443.10 131 313 1.1E-10 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 Gene3D G3DSA:3.40.50.10730 140 347 3.1E-259 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 Pfam PF17391 Urocanase N-terminal domain 10 136 3.2E-62 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 SUPERFAMILY SSF111326 3 553 4.05E-261 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 Hamap MF_00577 Urocanate hydratase [hutU]. 1 554 50.149 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 ProSitePatterns PS01233 Urocanase signature. 440 455 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 Gene3D G3DSA:3.40.1770.10 15 540 3.1E-259 T 14-10-2018 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 PIRSF PIRSF001423 1 559 2.0E-294 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 Pfam PF17392 Urocanase C-terminal domain 350 543 1.5E-92 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 TIGRFAM TIGR01228 hutU: urocanate hydratase 8 552 3.0E-295 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04000 3d6e2f476f6fdc9804ec94b5299a6767 579 Pfam PF01175 Urocanase Rossmann-like domain 139 347 3.1E-85 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_07320 a03a5d4561af535b44f470b246ff007a 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.4E-20 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMBLS11_07320 a03a5d4561af535b44f470b246ff007a 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.4E-20 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMBLS11_07320 a03a5d4561af535b44f470b246ff007a 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.4E-20 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMBLS11_07320 a03a5d4561af535b44f470b246ff007a 65 Pfam PF01632 Ribosomal protein L35 2 62 1.5E-24 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07320 a03a5d4561af535b44f470b246ff007a 65 SUPERFAMILY SSF143034 2 64 3.14E-24 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07320 a03a5d4561af535b44f470b246ff007a 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.2E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMBLS11_07320 a03a5d4561af535b44f470b246ff007a 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_07320 a03a5d4561af535b44f470b246ff007a 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.664 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMBLS11_07320 a03a5d4561af535b44f470b246ff007a 65 Gene3D G3DSA:2.40.50.530 1 64 1.7E-22 T 14-10-2018 AMBLS11_11710 7ee87b4cb9275b5280efd0e303711436 360 Gene3D G3DSA:1.10.8.350 73 238 5.1E-84 T 14-10-2018 AMBLS11_11710 7ee87b4cb9275b5280efd0e303711436 360 Pfam PF13406 Transglycosylase SLT domain 63 354 1.0E-101 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 AMBLS11_11710 7ee87b4cb9275b5280efd0e303711436 360 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 63 357 3.5E-108 T 14-10-2018 IPR011970 Lytic murein transglycosylase AMBLS11_11710 7ee87b4cb9275b5280efd0e303711436 360 Gene3D G3DSA:1.10.530.10 105 353 5.1E-84 T 14-10-2018 AMBLS11_11710 7ee87b4cb9275b5280efd0e303711436 360 SUPERFAMILY SSF53955 59 359 1.35E-89 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMBLS11_12165 d7dffe1f7fdf904f25888d495795f6e4 166 PIRSF PIRSF006162 6 163 1.0E-51 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMBLS11_12165 d7dffe1f7fdf904f25888d495795f6e4 166 Pfam PF04608 Phosphatidylglycerophosphatase A 16 155 7.3E-49 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AMBLS11_12165 d7dffe1f7fdf904f25888d495795f6e4 166 SUPERFAMILY SSF101307 9 156 1.57E-42 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 AMBLS11_04770 b89fd467f3e7582747d5a1fae14e2570 407 Gene3D G3DSA:1.20.1330.10 227 383 1.6E-9 T 14-10-2018 AMBLS11_04770 b89fd467f3e7582747d5a1fae14e2570 407 Gene3D G3DSA:1.20.1330.10 37 210 1.3E-33 T 14-10-2018 AMBLS11_04770 b89fd467f3e7582747d5a1fae14e2570 407 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 407 2.1E-84 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AMBLS11_04770 b89fd467f3e7582747d5a1fae14e2570 407 Pfam PF00700 Bacterial flagellin C-terminal helical region 327 407 8.5E-9 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_04770 b89fd467f3e7582747d5a1fae14e2570 407 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 2.7E-28 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_04770 b89fd467f3e7582747d5a1fae14e2570 407 SUPERFAMILY SSF64518 1 407 5.62E-76 T 14-10-2018 AMBLS11_16675 1a188fdfebd2864a2387f2b43dd7f8ed 442 SMART SM01086 334 430 2.7E-20 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMBLS11_16675 1a188fdfebd2864a2387f2b43dd7f8ed 442 SMART SM00382 49 331 3.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_16675 1a188fdfebd2864a2387f2b43dd7f8ed 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 172 328 1.2E-42 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_16675 1a188fdfebd2864a2387f2b43dd7f8ed 442 SUPERFAMILY SSF52540 3 440 2.36E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_16675 1a188fdfebd2864a2387f2b43dd7f8ed 442 Gene3D G3DSA:1.10.8.60 334 439 1.1E-39 T 14-10-2018 AMBLS11_16675 1a188fdfebd2864a2387f2b43dd7f8ed 442 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 442 43.334 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMBLS11_16675 1a188fdfebd2864a2387f2b43dd7f8ed 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 9.4E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_16675 1a188fdfebd2864a2387f2b43dd7f8ed 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 442 3.3E-220 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMBLS11_17350 54270d729df941aa3b5d2563a6b2d07a 157 Pfam PF01475 Ferric uptake regulator family 17 135 2.1E-19 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMBLS11_17350 54270d729df941aa3b5d2563a6b2d07a 157 SUPERFAMILY SSF46785 9 141 4.93E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_17350 54270d729df941aa3b5d2563a6b2d07a 157 Gene3D G3DSA:1.10.10.10 1 86 1.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_17350 54270d729df941aa3b5d2563a6b2d07a 157 Gene3D G3DSA:3.30.1490.190 89 148 2.7E-18 T 14-10-2018 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 SUPERFAMILY SSF69742 1 156 9.42E-47 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 169 304 4.6E-45 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 Gene3D G3DSA:3.40.50.720 159 311 2.2E-43 T 14-10-2018 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 SUPERFAMILY SSF51735 160 313 2.44E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 PIRSF PIRSF000445 1 424 1.8E-149 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 402 4.7E-135 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 29.69 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 401 3.7E-17 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 SUPERFAMILY SSF69075 315 416 5.23E-22 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 Gene3D G3DSA:3.30.460.30 1 156 8.1E-56 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMBLS11_06895 e9dd1cce7936e31fb8a4d41cecc1484c 424 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.0E-48 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMBLS11_02860 b49cbced4d6f4532df3a848d7a2c3796 233 SUPERFAMILY SSF56784 20 226 1.68E-44 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_02860 b49cbced4d6f4532df3a848d7a2c3796 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 6.6E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_02860 b49cbced4d6f4532df3a848d7a2c3796 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 116 129 6.6E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_02860 b49cbced4d6f4532df3a848d7a2c3796 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 19 30 6.6E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_02860 b49cbced4d6f4532df3a848d7a2c3796 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 163 6.6E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_02860 b49cbced4d6f4532df3a848d7a2c3796 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 202 5.8E-31 T 14-10-2018 AMBLS11_02860 b49cbced4d6f4532df3a848d7a2c3796 233 Gene3D G3DSA:3.40.50.1000 22 219 3.0E-49 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_02860 b49cbced4d6f4532df3a848d7a2c3796 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 202 1.4E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_02860 b49cbced4d6f4532df3a848d7a2c3796 233 Gene3D G3DSA:1.10.150.240 32 103 3.0E-49 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMBLS11_02980 8a9946b9e3ea9d01708078d6e6024fd5 327 SUPERFAMILY SSF53790 69 314 5.23E-69 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMBLS11_02980 8a9946b9e3ea9d01708078d6e6024fd5 327 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 73 310 3.4E-79 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMBLS11_02980 8a9946b9e3ea9d01708078d6e6024fd5 327 Gene3D G3DSA:3.40.1010.10 71 188 6.9E-40 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMBLS11_02980 8a9946b9e3ea9d01708078d6e6024fd5 327 Gene3D G3DSA:3.30.950.10 189 326 7.1E-38 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMBLS11_02980 8a9946b9e3ea9d01708078d6e6024fd5 327 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 75 286 2.9E-48 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMBLS11_02980 8a9946b9e3ea9d01708078d6e6024fd5 327 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 78 92 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SMART SM00388 433 498 1.6E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Gene3D G3DSA:3.40.50.2300 664 802 1.5E-26 T 14-10-2018 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Gene3D G3DSA:3.30.565.10 497 663 3.2E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SUPERFAMILY SSF52172 815 937 1.35E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SUPERFAMILY SSF47226 915 1057 2.62E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 545 657 1.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Gene3D G3DSA:1.25.40.10 228 390 8.2E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SUPERFAMILY SSF48452 184 373 3.45E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 638 9.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 599 9.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 657 9.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 613 9.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Gene3D G3DSA:1.25.40.10 10 227 1.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SUPERFAMILY SSF48452 93 223 3.54E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Pfam PF00512 His Kinase A (phospho-acceptor) domain 433 498 1.8E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SUPERFAMILY SSF47384 419 499 2.55E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SUPERFAMILY SSF55874 487 656 1.18E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Gene3D G3DSA:1.10.287.130 411 496 9.0E-24 T 14-10-2018 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Gene3D G3DSA:1.20.120.160 957 1070 1.2E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SMART SM00387 545 660 4.8E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SUPERFAMILY SSF52172 673 797 5.27E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Pfam PF00072 Response regulator receiver domain 678 794 3.5E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Pfam PF00072 Response regulator receiver domain 821 929 1.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Gene3D G3DSA:3.40.50.2300 816 955 7.8E-37 T 14-10-2018 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SMART SM00028 191 224 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SMART SM00028 112 145 47.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SMART SM00028 230 263 5.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SMART SM00028 151 184 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 Pfam PF01627 Hpt domain 987 1058 3.9E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SMART SM00448 819 932 2.6E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13670 5b2f91a3df580658cccd63ad13231bf8 1070 SMART SM00448 676 794 8.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_07935 b9e3f86b5223eda21137a29e05af7da6 185 TIGRFAM TIGR04026 PPOX_FMN_cyano: PPOX class probable FMN-dependent enzyme, alr4036 family 1 185 5.7E-69 T 14-10-2018 IPR024015 Pyridoxamine 5'-phosphate oxidase, probable FMN-dependent, Alr4036 family KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AMBLS11_07935 b9e3f86b5223eda21137a29e05af7da6 185 Pfam PF12766 Pyridoxamine 5'-phosphate oxidase 1 93 3.4E-25 T 14-10-2018 IPR024624 Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain GO:0010181 AMBLS11_07935 b9e3f86b5223eda21137a29e05af7da6 185 Gene3D G3DSA:2.30.110.10 1 185 3.3E-53 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMBLS11_07935 b9e3f86b5223eda21137a29e05af7da6 185 SUPERFAMILY SSF50475 1 185 2.36E-38 T 14-10-2018 AMBLS11_00695 2798984a78248a652da7516b4019f5f0 493 SUPERFAMILY SSF58104 206 493 3.14E-55 T 14-10-2018 AMBLS11_00695 2798984a78248a652da7516b4019f5f0 493 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 387 7.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_00695 2798984a78248a652da7516b4019f5f0 493 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 329 356 7.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_00695 2798984a78248a652da7516b4019f5f0 493 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 283 7.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_00695 2798984a78248a652da7516b4019f5f0 493 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 7.0E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_00695 2798984a78248a652da7516b4019f5f0 493 SMART SM00283 231 492 6.5E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_00695 2798984a78248a652da7516b4019f5f0 493 Gene3D G3DSA:1.10.287.950 172 493 1.5E-50 T 14-10-2018 AMBLS11_00695 2798984a78248a652da7516b4019f5f0 493 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 276 458 1.8E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_05910 17e845232062d978bcedbdd3f42e67f1 688 SUPERFAMILY SSF75011 78 542 4.05E-10 T 14-10-2018 AMBLS11_05910 17e845232062d978bcedbdd3f42e67f1 688 Gene3D G3DSA:2.120.10.30 86 266 2.5E-6 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_05910 17e845232062d978bcedbdd3f42e67f1 688 SUPERFAMILY SSF63825 401 659 4.84E-11 T 14-10-2018 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 Gene3D G3DSA:1.20.210.10 21 565 5.8E-185 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 403 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 180 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 371 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 126 150 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 280 301 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 413 432 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 218 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 229 248 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 49 74 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 122 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 341 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 463 484 6.0E-96 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 58 506 6.8E-133 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 4 649 0.0 T 14-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 282 336 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17935 1a69b8d3f38e3fde74a2356253587998 662 SUPERFAMILY SSF81442 45 560 9.16E-175 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_13290 e729b20bd9f4e9ec55f2d64fde1a73ff 967 SUPERFAMILY SSF56935 30 966 1.65E-72 T 14-10-2018 AMBLS11_13290 e729b20bd9f4e9ec55f2d64fde1a73ff 967 Gene3D G3DSA:2.170.130.10 44 162 1.4E-10 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_13290 e729b20bd9f4e9ec55f2d64fde1a73ff 967 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 37 966 2.3E-147 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_13290 e729b20bd9f4e9ec55f2d64fde1a73ff 967 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 158 7.1E-11 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_15425 c84d57b66a4bfa1edac3b6e7eb8f0cd6 441 Gene3D G3DSA:3.30.70.100 322 423 2.2E-17 T 14-10-2018 AMBLS11_15425 c84d57b66a4bfa1edac3b6e7eb8f0cd6 441 SUPERFAMILY SSF82689 324 430 6.67E-22 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMBLS11_15425 c84d57b66a4bfa1edac3b6e7eb8f0cd6 441 Gene3D G3DSA:2.30.30.60 271 320 4.7E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_15425 c84d57b66a4bfa1edac3b6e7eb8f0cd6 441 SUPERFAMILY SSF50182 255 321 3.27E-14 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_15425 c84d57b66a4bfa1edac3b6e7eb8f0cd6 441 Pfam PF00924 Mechanosensitive ion channel 212 419 1.7E-45 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_15425 c84d57b66a4bfa1edac3b6e7eb8f0cd6 441 SUPERFAMILY SSF82861 172 253 4.58E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMBLS11_10365 706a2c3be36a6bbb935dfe0b30da2a8d 413 Gene3D G3DSA:3.40.640.10 2 276 3.8E-66 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_10365 706a2c3be36a6bbb935dfe0b30da2a8d 413 SUPERFAMILY SSF53383 38 411 4.17E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_10365 706a2c3be36a6bbb935dfe0b30da2a8d 413 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 410 8.5E-102 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMBLS11_10365 706a2c3be36a6bbb935dfe0b30da2a8d 413 Gene3D G3DSA:3.90.1150.10 277 413 1.4E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_10365 706a2c3be36a6bbb935dfe0b30da2a8d 413 PIRSF PIRSF001434 2 413 8.0E-112 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMBLS11_04260 be6c264f91362c8c714aaa0b8e00ac07 543 Pfam PF00117 Glutamine amidotransferase class-I 300 533 1.7E-60 T 14-10-2018 IPR017926 Glutamine amidotransferase AMBLS11_04260 be6c264f91362c8c714aaa0b8e00ac07 543 SUPERFAMILY SSF52317 288 541 1.78E-87 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_04260 be6c264f91362c8c714aaa0b8e00ac07 543 Pfam PF06418 CTP synthase N-terminus 4 265 2.3E-123 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMBLS11_04260 be6c264f91362c8c714aaa0b8e00ac07 543 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 2.5E-257 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMBLS11_04260 be6c264f91362c8c714aaa0b8e00ac07 543 Gene3D G3DSA:3.40.50.300 1 284 1.6E-131 T 14-10-2018 AMBLS11_04260 be6c264f91362c8c714aaa0b8e00ac07 543 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.184 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMBLS11_04260 be6c264f91362c8c714aaa0b8e00ac07 543 Gene3D G3DSA:3.40.50.880 285 543 1.2E-105 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_04260 be6c264f91362c8c714aaa0b8e00ac07 543 SUPERFAMILY SSF52540 1 268 1.06E-119 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 Gene3D G3DSA:1.25.40.10 634 832 1.3E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 SUPERFAMILY SSF48452 615 819 3.98E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 SUPERFAMILY SSF56112 29 262 2.16E-49 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 SMART SM00220 35 266 9.2E-26 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 Pfam PF00069 Protein kinase domain 36 220 1.5E-39 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 SMART SM00028 670 703 3.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 SMART SM00028 710 743 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 SMART SM00028 555 588 0.0065 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 SMART SM00028 630 663 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 SMART SM00028 750 783 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 151 163 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 SUPERFAMILY SSF48452 476 608 3.8E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 Gene3D G3DSA:1.25.40.10 461 633 3.8E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16125 4d4cfba63d1c13c7ae2a96b39bf1fdd1 1052 Gene3D G3DSA:1.10.510.10 26 291 8.1E-46 T 14-10-2018 AMBLS11_03230 6ba07643c0d1c815c8e2061760c6a958 898 Gene3D G3DSA:2.170.130.10 32 168 2.5E-8 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_03230 6ba07643c0d1c815c8e2061760c6a958 898 SUPERFAMILY SSF56935 42 896 6.11E-70 T 14-10-2018 AMBLS11_03230 6ba07643c0d1c815c8e2061760c6a958 898 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 157 1.5E-8 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_13545 cc270631f0be575f090442d0f49cad57 230 Pfam PF04397 LytTr DNA-binding domain 134 228 1.7E-17 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_13545 cc270631f0be575f090442d0f49cad57 230 SMART SM00448 1 111 8.9E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13545 cc270631f0be575f090442d0f49cad57 230 SUPERFAMILY SSF52172 1 115 8.68E-20 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_13545 cc270631f0be575f090442d0f49cad57 230 Gene3D G3DSA:2.40.50.40 125 191 1.1E-8 T 14-10-2018 AMBLS11_13545 cc270631f0be575f090442d0f49cad57 230 Pfam PF00072 Response regulator receiver domain 3 112 1.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13545 cc270631f0be575f090442d0f49cad57 230 SMART SM00850 132 229 1.8E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_13545 cc270631f0be575f090442d0f49cad57 230 Gene3D G3DSA:3.40.50.2300 1 124 3.0E-21 T 14-10-2018 AMBLS11_05780 58814538fcf4dcc9806c028b0f0b64fd 574 Pfam PF02080 TrkA-C domain 294 354 9.0E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMBLS11_05780 58814538fcf4dcc9806c028b0f0b64fd 574 Pfam PF02080 TrkA-C domain 208 274 1.2E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMBLS11_05780 58814538fcf4dcc9806c028b0f0b64fd 574 SUPERFAMILY SSF116726 293 358 5.49E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_05780 58814538fcf4dcc9806c028b0f0b64fd 574 Gene3D G3DSA:3.30.70.1450 204 280 6.2E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_05780 58814538fcf4dcc9806c028b0f0b64fd 574 Gene3D G3DSA:3.30.70.1450 291 362 8.2E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_05780 58814538fcf4dcc9806c028b0f0b64fd 574 Pfam PF03600 Citrate transporter 19 520 1.7E-30 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AMBLS11_05780 58814538fcf4dcc9806c028b0f0b64fd 574 SUPERFAMILY SSF116726 204 284 7.85E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 45.007 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 Pfam PF01842 ACT domain 6 58 1.0E-7 T 14-10-2018 IPR002912 ACT domain AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 2.6E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 2.6E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 2.6E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 2.6E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 2.6E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 2.6E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 SUPERFAMILY SSF53328 89 283 2.09E-55 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 Pfam PF00551 Formyl transferase 89 262 2.8E-36 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 Gene3D G3DSA:3.30.70.260 1 87 2.7E-25 T 14-10-2018 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 3.1E-103 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 SUPERFAMILY SSF55021 4 84 8.1E-15 T 14-10-2018 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 PIRSF PIRSF036480 2 284 1.6E-110 T 14-10-2018 AMBLS11_01815 52a867af4db9ddc5524a125815eb7a05 284 Gene3D G3DSA:3.40.50.170 88 284 1.3E-68 T 14-10-2018 AMBLS11_06350 6550057c8eb6803ed48ba659410d14a3 256 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 209 4.9E-41 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AMBLS11_06350 6550057c8eb6803ed48ba659410d14a3 256 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 246 28.666 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AMBLS11_06350 6550057c8eb6803ed48ba659410d14a3 256 Pfam PF13500 AAA domain 2 239 6.0E-29 T 14-10-2018 AMBLS11_06350 6550057c8eb6803ed48ba659410d14a3 256 PIRSF PIRSF006755 69 256 3.4E-43 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AMBLS11_06350 6550057c8eb6803ed48ba659410d14a3 256 PIRSF PIRSF006755 1 83 2.7E-19 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AMBLS11_06350 6550057c8eb6803ed48ba659410d14a3 256 Gene3D G3DSA:3.40.50.300 1 253 8.1E-59 T 14-10-2018 AMBLS11_06350 6550057c8eb6803ed48ba659410d14a3 256 SUPERFAMILY SSF52540 1 241 2.51E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12190 95b545b2ad29697323f036374f36ad41 220 SUPERFAMILY SSF63380 1 92 4.76E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_12190 95b545b2ad29697323f036374f36ad41 220 Pfam PF00677 Lumazine binding domain 3 87 5.2E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_12190 95b545b2ad29697323f036374f36ad41 220 Pfam PF00677 Lumazine binding domain 100 184 1.5E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_12190 95b545b2ad29697323f036374f36ad41 220 Gene3D G3DSA:2.40.30.20 102 204 2.2E-36 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_12190 95b545b2ad29697323f036374f36ad41 220 Gene3D G3DSA:2.40.30.20 1 89 9.0E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_12190 95b545b2ad29697323f036374f36ad41 220 PIRSF PIRSF000498 1 212 2.4E-78 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_12190 95b545b2ad29697323f036374f36ad41 220 SUPERFAMILY SSF63380 93 194 3.83E-34 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_12190 95b545b2ad29697323f036374f36ad41 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 4.7E-68 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 172 308 6.2E-21 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 SMART SM00047 156 312 2.0E-31 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 PRINTS PR01002 Flagellar protein FlgJ signature 205 226 1.3E-27 T 14-10-2018 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 PRINTS PR01002 Flagellar protein FlgJ signature 292 310 1.3E-27 T 14-10-2018 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 PRINTS PR01002 Flagellar protein FlgJ signature 185 203 1.3E-27 T 14-10-2018 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 PRINTS PR01002 Flagellar protein FlgJ signature 227 248 1.3E-27 T 14-10-2018 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 PRINTS PR01002 Flagellar protein FlgJ signature 32 55 1.3E-27 T 14-10-2018 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 PRINTS PR01002 Flagellar protein FlgJ signature 249 270 1.3E-27 T 14-10-2018 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 16 309 9.3E-89 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 Gene3D G3DSA:1.10.530.10 166 305 4.4E-43 T 14-10-2018 AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 Pfam PF10135 Rod binding protein 54 105 2.0E-17 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal AMBLS11_04760 9f20a53f802248d1d6d2b36fbd300a27 316 Gene3D G3DSA:2.10.70.40 200 252 4.4E-43 T 14-10-2018 AMBLS11_13870 6aeaf294ee4d222a3e66d7c52fcbcbc0 218 SUPERFAMILY SSF100950 1 146 2.88E-45 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_13870 6aeaf294ee4d222a3e66d7c52fcbcbc0 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 1.3E-70 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AMBLS11_13870 6aeaf294ee4d222a3e66d7c52fcbcbc0 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.652 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AMBLS11_13870 6aeaf294ee4d222a3e66d7c52fcbcbc0 218 Gene3D G3DSA:3.30.70.260 125 196 1.2E-77 T 14-10-2018 AMBLS11_13870 6aeaf294ee4d222a3e66d7c52fcbcbc0 218 SUPERFAMILY SSF75445 127 198 1.83E-24 T 14-10-2018 AMBLS11_13870 6aeaf294ee4d222a3e66d7c52fcbcbc0 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 8.0E-59 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AMBLS11_13870 6aeaf294ee4d222a3e66d7c52fcbcbc0 218 Gene3D G3DSA:3.40.50.1360 7 206 1.2E-77 T 14-10-2018 AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Gene3D G3DSA:2.130.10.10 23 274 2.0E-19 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Gene3D G3DSA:2.130.10.10 514 674 9.9E-26 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 SMART SM00267 955 1126 2.6E-55 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 966 1119 1.2E-47 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Gene3D G3DSA:2.130.10.10 317 500 6.9E-19 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 964 1119 4.7E-42 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Gene3D G3DSA:3.30.70.270 960 1140 2.5E-57 T 14-10-2018 AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 SUPERFAMILY SSF141868 1142 1388 1.01E-71 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 SMART SM00052 1137 1381 1.0E-74 T 14-10-2018 IPR001633 EAL domain AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 SUPERFAMILY SSF63829 372 646 1.63E-13 T 14-10-2018 AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Gene3D G3DSA:2.60.40.10 684 798 1.6E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Gene3D G3DSA:3.20.20.450 1141 1388 7.9E-74 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Gene3D G3DSA:3.30.450.20 834 959 5.6E-17 T 14-10-2018 AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 SUPERFAMILY SSF63829 30 171 3.49E-8 T 14-10-2018 AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 838 962 3.8E-10 T 14-10-2018 IPR000014 PAS domain AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Pfam PF13426 PAS domain 852 954 5.2E-8 T 14-10-2018 IPR000014 PAS domain AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 SUPERFAMILY SSF55073 971 1127 3.73E-45 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 Pfam PF00563 EAL domain 1143 1376 6.2E-54 T 14-10-2018 IPR001633 EAL domain AMBLS11_10820 e88fa6a688878c6f864650f70c60dccd 1391 SUPERFAMILY SSF55785 851 962 1.26E-13 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_13850 fbb95282ea5b97c38e9e46e474b7d1d3 298 Gene3D G3DSA:3.40.1190.20 1 298 4.5E-82 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_13850 fbb95282ea5b97c38e9e46e474b7d1d3 298 SUPERFAMILY SSF53613 1 293 1.03E-67 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_13850 fbb95282ea5b97c38e9e46e474b7d1d3 298 Pfam PF00294 pfkB family carbohydrate kinase 6 285 1.4E-46 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMBLS11_13850 fbb95282ea5b97c38e9e46e474b7d1d3 298 Hamap MF_01987 Ribokinase [rbsK]. 1 292 20.825 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AMBLS11_13850 fbb95282ea5b97c38e9e46e474b7d1d3 298 PRINTS PR00990 Ribokinase signature 5 26 4.6E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMBLS11_13850 fbb95282ea5b97c38e9e46e474b7d1d3 298 PRINTS PR00990 Ribokinase signature 32 51 4.6E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMBLS11_13850 fbb95282ea5b97c38e9e46e474b7d1d3 298 PRINTS PR00990 Ribokinase signature 168 183 4.6E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMBLS11_13850 fbb95282ea5b97c38e9e46e474b7d1d3 298 PRINTS PR00990 Ribokinase signature 101 114 4.6E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMBLS11_13850 fbb95282ea5b97c38e9e46e474b7d1d3 298 PRINTS PR00990 Ribokinase signature 208 219 4.6E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 SUPERFAMILY SSF51126 1716 2035 2.32E-74 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 Gene3D G3DSA:2.160.20.10 1369 1693 8.1E-43 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 Pfam PF00544 Pectate lyase 1786 1956 3.9E-32 T 14-10-2018 IPR002022 Pectate lyase AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 Pfam PF01095 Pectinesterase 1358 1628 6.5E-12 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 Gene3D G3DSA:2.160.20.10 1715 2035 1.3E-96 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 SUPERFAMILY SSF51126 1353 1683 1.22E-35 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 Gene3D G3DSA:2.60.40.1080 1118 1208 5.4E-7 T 14-10-2018 AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 SMART SM00656 1744 1962 3.9E-25 T 14-10-2018 IPR002022 Pectate lyase AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 SUPERFAMILY SSF49899 975 1114 2.26E-7 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMBLS11_17965 2d82d3722722eeec3c1adbab0d854cbd 2045 Gene3D G3DSA:2.60.120.560 928 1112 9.4E-18 T 14-10-2018 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 Pfam PF13242 HAD-hyrolase-like 104 147 3.9E-6 T 14-10-2018 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 168 356 36.43 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 Gene3D G3DSA:3.30.230.40 164 255 9.6E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 3 356 50.011 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 Gene3D G3DSA:3.30.230.40 256 356 1.7E-33 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 Gene3D G3DSA:3.40.50.1000 1 163 8.6E-47 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 SUPERFAMILY SSF54211 253 343 1.39E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 150 5.5E-27 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 SUPERFAMILY SSF56784 3 159 1.63E-40 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 SUPERFAMILY SSF54211 168 252 4.55E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 146 3.3E-47 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 163 5.8E-78 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 197 338 1.1E-63 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMBLS11_11850 79b1933ffac773180fa013b68c004f78 356 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 227 240 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMBLS11_07125 fa5aab921335b1c6c8fdbf3f9761e813 119 Gene3D G3DSA:1.10.10.10 5 119 1.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_07125 fa5aab921335b1c6c8fdbf3f9761e813 119 Pfam PF01638 HxlR-like helix-turn-helix 31 118 1.1E-23 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMBLS11_07125 fa5aab921335b1c6c8fdbf3f9761e813 119 SUPERFAMILY SSF46785 17 117 1.82E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_01215 ce147bd4353d5d23c72e8dae73e7ec6e 169 Pfam PF04214 Protein of unknown function, DUF 68 136 1.5E-24 T 14-10-2018 IPR007332 Protein of unknown function DUF411 AMBLS11_01215 ce147bd4353d5d23c72e8dae73e7ec6e 169 SUPERFAMILY SSF52833 24 116 5.26E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_04930 18ce579763437d990815c179087f28eb 264 SUPERFAMILY SSF64518 8 263 3.92E-61 T 14-10-2018 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 Gene3D G3DSA:1.20.58.1830 229 263 1.0E-23 T 14-10-2018 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 Gene3D G3DSA:1.20.58.1830 8 26 7.9E-42 T 14-10-2018 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 134 4.8E-23 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 Pfam PF00700 Bacterial flagellin C-terminal helical region 179 263 2.3E-17 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 Gene3D G3DSA:2.170.280.10 160 171 1.0E-23 T 14-10-2018 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 PRINTS PR00207 Flagellin signature 30 47 8.4E-15 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 PRINTS PR00207 Flagellin signature 69 88 8.4E-15 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 PRINTS PR00207 Flagellin signature 104 127 8.4E-15 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 Gene3D G3DSA:1.20.1330.10 38 159 7.9E-42 T 14-10-2018 AMBLS11_04930 18ce579763437d990815c179087f28eb 264 Gene3D G3DSA:1.20.1330.10 172 223 1.0E-23 T 14-10-2018 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 317 1.8E-78 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 398 3.8E-126 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 SUPERFAMILY SSF52374 8 315 3.52E-96 T 14-10-2018 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 Gene3D G3DSA:1.10.240.10 218 326 1.6E-34 T 14-10-2018 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 SUPERFAMILY SSF55174 320 398 8.77E-19 T 14-10-2018 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 Pfam PF13275 S4 domain 331 370 5.8E-6 T 14-10-2018 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 48.243 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 Gene3D G3DSA:3.10.290.10 327 398 2.5E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 Gene3D G3DSA:3.40.50.620 5 217 3.6E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 8.4E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 8.4E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 8.4E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMBLS11_14690 97e3c7ed4dec420b3644b53caff8dbe0 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 8.4E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMBLS11_02710 36fc02d844b5480645ef3916d7bc651f 180 PRINTS PR00502 NUDIX hydrolase family signature 47 62 8.4E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMBLS11_02710 36fc02d844b5480645ef3916d7bc651f 180 PRINTS PR00502 NUDIX hydrolase family signature 33 47 8.4E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMBLS11_02710 36fc02d844b5480645ef3916d7bc651f 180 SUPERFAMILY SSF55811 7 155 4.47E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_02710 36fc02d844b5480645ef3916d7bc651f 180 Pfam PF00293 NUDIX domain 7 146 6.8E-26 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMBLS11_02710 36fc02d844b5480645ef3916d7bc651f 180 Gene3D G3DSA:3.90.79.10 1 160 9.6E-48 T 14-10-2018 AMBLS11_02710 36fc02d844b5480645ef3916d7bc651f 180 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.583 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH AMBLS11_02710 36fc02d844b5480645ef3916d7bc651f 180 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 SUPERFAMILY SSF55234 82 149 7.19E-30 T 14-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 Gene3D G3DSA:1.10.260.40 2 82 2.5E-28 T 14-10-2018 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 SUPERFAMILY SSF47413 2 79 1.91E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 PRINTS PR01693 Cyanase signature 134 144 1.4E-25 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 PRINTS PR01693 Cyanase signature 36 53 1.4E-25 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 PRINTS PR01693 Cyanase signature 85 99 1.4E-25 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 PRINTS PR01693 Cyanase signature 103 119 1.4E-25 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 PRINTS PR01693 Cyanase signature 16 31 1.4E-25 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 PIRSF PIRSF001263 1 149 3.2E-48 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 Pfam PF02560 Cyanate lyase C-terminal domain 81 147 4.0E-35 T 14-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 Gene3D G3DSA:3.30.1160.10 83 149 5.3E-34 T 14-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 SMART SM01116 77 149 1.3E-49 T 14-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 TIGRFAM TIGR00673 cynS: cyanase 6 149 1.9E-51 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_06955 0a16fb1ff92ff6888fe1ff48ed3dd9f2 149 Hamap MF_00535 Cyanate hydratase [cynS]. 1 149 80.26 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 SUPERFAMILY SSF51735 5 253 2.5E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 Gene3D G3DSA:3.40.50.720 2 253 3.5E-77 T 14-10-2018 AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.3E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.3E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.3E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.3E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.3E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.3E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_07970 6cbb2c7b529f93d8e08b744bb4d5812a 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 6.8E-62 T 14-10-2018 AMBLS11_18555 4cd988d82d52fcb2b2b777ff1e3a37d0 192 SUPERFAMILY SSF89360 1 97 6.08E-23 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMBLS11_18555 4cd988d82d52fcb2b2b777ff1e3a37d0 192 SUPERFAMILY SSF117916 95 185 1.18E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMBLS11_18555 4cd988d82d52fcb2b2b777ff1e3a37d0 192 Gene3D G3DSA:3.30.300.130 101 189 1.9E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMBLS11_18555 4cd988d82d52fcb2b2b777ff1e3a37d0 192 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 192 7.7E-99 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AMBLS11_18555 4cd988d82d52fcb2b2b777ff1e3a37d0 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 44.662 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AMBLS11_18555 4cd988d82d52fcb2b2b777ff1e3a37d0 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 180 3.0E-24 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMBLS11_18555 4cd988d82d52fcb2b2b777ff1e3a37d0 192 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 4.0E-12 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AMBLS11_18555 4cd988d82d52fcb2b2b777ff1e3a37d0 192 Gene3D G3DSA:2.60.300.12 1 98 3.6E-15 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMBLS11_18555 4cd988d82d52fcb2b2b777ff1e3a37d0 192 Pfam PF01106 NifU-like domain 111 174 6.0E-18 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 Pfam PF13545 Crp-like helix-turn-helix domain 159 231 2.6E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 Gene3D G3DSA:1.10.10.10 156 236 2.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 SUPERFAMILY SSF46785 157 231 1.19E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 SMART SM00100 21 142 2.4E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 SUPERFAMILY SSF51206 14 152 1.26E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 200 215 1.7E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 200 1.7E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 Pfam PF00027 Cyclic nucleotide-binding domain 42 123 1.8E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 ProSitePatterns PS00042 Crp-type HTH domain signature. 186 209 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 Gene3D G3DSA:2.60.120.10 34 155 2.0E-41 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_09550 5a1f7f55f92a7dbc8e23aafaad242955 246 SMART SM00419 178 226 5.0E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMBLS11_00995 6ca73cabc3da5b0827a3aa01085c0a3d 195 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_00995 6ca73cabc3da5b0827a3aa01085c0a3d 195 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.2E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_00995 6ca73cabc3da5b0827a3aa01085c0a3d 195 Gene3D G3DSA:3.30.700.10 8 141 3.2E-7 T 14-10-2018 AMBLS11_00995 6ca73cabc3da5b0827a3aa01085c0a3d 195 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 6.8E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_00995 6ca73cabc3da5b0827a3aa01085c0a3d 195 SUPERFAMILY SSF54523 8 63 9.42E-9 T 14-10-2018 AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 Pfam PF16193 AAA C-terminal domain 184 257 1.8E-23 T 14-10-2018 IPR032423 AAA C-terminal domain AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 48 155 2.4E-16 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 Gene3D G3DSA:1.20.272.10 231 335 1.3E-41 T 14-10-2018 AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 Gene3D G3DSA:1.10.8.60 160 230 2.2E-14 T 14-10-2018 AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 Gene3D G3DSA:1.10.3710.10 336 435 4.2E-35 T 14-10-2018 AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 Pfam PF12002 MgsA AAA+ ATPase C terminal 258 420 5.8E-63 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 Gene3D G3DSA:3.40.50.300 3 159 7.4E-45 T 14-10-2018 AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 SUPERFAMILY SSF52540 8 235 1.35E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 SUPERFAMILY SSF48019 242 423 3.23E-70 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMBLS11_09825 5c2b7beba3e0dbdbe93e74a4c9b24f6d 435 SMART SM00382 44 160 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_01655 0ef3df1388b56034abc675bdd01835ac 355 Pfam PF01261 Xylose isomerase-like TIM barrel 33 282 1.5E-41 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMBLS11_01655 0ef3df1388b56034abc675bdd01835ac 355 SUPERFAMILY SSF51658 12 326 2.35E-66 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMBLS11_01655 0ef3df1388b56034abc675bdd01835ac 355 Pfam PF07582 AP endonuclease family 2 C terminus 283 337 3.0E-21 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal AMBLS11_01655 0ef3df1388b56034abc675bdd01835ac 355 Gene3D G3DSA:3.20.20.150 21 329 9.2E-76 T 14-10-2018 AMBLS11_07010 39cfb47e747f77fd397be5a8b5215993 343 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 343 146.576 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AMBLS11_07010 39cfb47e747f77fd397be5a8b5215993 343 Gene3D G3DSA:2.40.50.630 269 331 1.1E-114 T 14-10-2018 AMBLS11_07010 39cfb47e747f77fd397be5a8b5215993 343 PIRSF PIRSF017020 4 342 7.2E-136 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AMBLS11_07010 39cfb47e747f77fd397be5a8b5215993 343 SUPERFAMILY SSF53187 23 336 5.97E-77 T 14-10-2018 AMBLS11_07010 39cfb47e747f77fd397be5a8b5215993 343 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 25 333 2.3E-105 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AMBLS11_07010 39cfb47e747f77fd397be5a8b5215993 343 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 54 336 1.3E-60 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AMBLS11_07010 39cfb47e747f77fd397be5a8b5215993 343 Gene3D G3DSA:3.40.630.10 30 268 1.1E-114 T 14-10-2018 AMBLS11_17505 51696ac95fa3bc670612e3508b911db4 119 Pfam PF16068 Domain of unknown function (DUF4810) 28 112 5.9E-29 T 14-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats AMBLS11_17505 51696ac95fa3bc670612e3508b911db4 119 PIRSF PIRSF020555 1 119 3.3E-32 T 14-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 SUPERFAMILY SSF116726 361 437 1.02E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 Gene3D G3DSA:3.40.50.720 2 139 3.4E-48 T 14-10-2018 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 Gene3D G3DSA:3.30.70.1450 140 232 1.3E-19 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 Gene3D G3DSA:3.30.70.1450 367 458 1.4E-30 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 Pfam PF02254 TrkA-N domain 235 350 7.4E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 Pfam PF02254 TrkA-N domain 3 125 9.5E-29 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 Pfam PF02080 TrkA-C domain 391 451 2.9E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 Pfam PF02080 TrkA-C domain 156 225 8.9E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 SUPERFAMILY SSF116726 147 226 2.35E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 SUPERFAMILY SSF51735 233 376 8.74E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.1E-31 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.1E-31 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.1E-31 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.1E-31 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.1E-31 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 SUPERFAMILY SSF51735 1 151 2.99E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_00095 1b6424da4438b479b75ecf7a45f458f9 459 Gene3D G3DSA:3.40.50.720 233 366 2.2E-37 T 14-10-2018 AMBLS11_16895 96a00803b73da4b7017a299298f3cddf 393 Pfam PF03773 Predicted permease 11 331 2.1E-43 T 14-10-2018 IPR005524 Predicted permease DUF318 AMBLS11_15250 88ac6ba85b02aa53886555e6c20b106c 251 Pfam PF03070 TENA/THI-4/PQQC family 13 224 3.2E-57 T 14-10-2018 IPR004305 Thiaminase-2/PQQC AMBLS11_15250 88ac6ba85b02aa53886555e6c20b106c 251 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 251 122.694 T 14-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AMBLS11_15250 88ac6ba85b02aa53886555e6c20b106c 251 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 7 232 1.9E-105 T 14-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AMBLS11_15250 88ac6ba85b02aa53886555e6c20b106c 251 Gene3D G3DSA:1.20.910.10 2 251 2.0E-68 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMBLS11_15250 88ac6ba85b02aa53886555e6c20b106c 251 SUPERFAMILY SSF48613 2 247 9.64E-72 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 Gene3D G3DSA:1.10.1440.20 562 619 1.8E-8 T 14-10-2018 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 4.8E-146 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 Pfam PF00694 Aconitase C-terminal domain 657 787 4.6E-29 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 SUPERFAMILY SSF52016 599 857 1.88E-66 T 14-10-2018 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 Gene3D G3DSA:3.30.499.10 359 561 5.8E-77 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 Gene3D G3DSA:3.20.19.10 620 858 1.6E-81 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 PRINTS PR00415 Aconitase family signature 191 204 3.2E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 PRINTS PR00415 Aconitase family signature 360 374 3.2E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 PRINTS PR00415 Aconitase family signature 138 151 3.2E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 PRINTS PR00415 Aconitase family signature 402 413 3.2E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 PRINTS PR00415 Aconitase family signature 205 220 3.2E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 PRINTS PR00415 Aconitase family signature 464 477 3.2E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 PRINTS PR00415 Aconitase family signature 267 280 3.2E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 PRINTS PR00415 Aconitase family signature 281 294 3.2E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 PRINTS PR00415 Aconitase family signature 162 170 3.2E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 Gene3D G3DSA:3.30.499.20 10 358 1.2E-130 T 14-10-2018 AMBLS11_14570 d63df2722d3819b2b548220edfd0f1ae 863 SUPERFAMILY SSF53732 23 587 2.62E-186 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 Pfam PF01202 Shikimate kinase 13 169 2.1E-56 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 31 44 6.2E-28 T 14-10-2018 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 77 86 6.2E-28 T 14-10-2018 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 7 22 6.2E-28 T 14-10-2018 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 59 67 6.2E-28 T 14-10-2018 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 PRINTS PR01100 Shikimate kinase family signature 98 115 6.2E-28 T 14-10-2018 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.176 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 Gene3D G3DSA:3.40.50.300 1 170 1.5E-57 T 14-10-2018 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMBLS11_02010 3a62ec3884aa67f278242816d02673eb 171 SUPERFAMILY SSF52540 4 168 8.42E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 3.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 3.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 3.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.3E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 SUPERFAMILY SSF82866 792 1020 1.24E-40 T 14-10-2018 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 SUPERFAMILY SSF82693 40 128 1.62E-17 T 14-10-2018 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 Gene3D G3DSA:1.20.1640.10 515 1017 7.1E-237 T 14-10-2018 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 Gene3D G3DSA:3.30.70.1320 133 329 7.1E-237 T 14-10-2018 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 Gene3D G3DSA:3.30.70.1430 40 806 7.1E-237 T 14-10-2018 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 Gene3D G3DSA:3.30.70.1430 567 660 7.1E-237 T 14-10-2018 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 Gene3D G3DSA:1.20.1640.10 17 514 7.1E-237 T 14-10-2018 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 SUPERFAMILY SSF82866 295 503 9.55E-36 T 14-10-2018 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 Gene3D G3DSA:3.30.70.1440 661 860 7.1E-237 T 14-10-2018 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 SUPERFAMILY SSF82714 711 794 5.23E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 Pfam PF00873 AcrB/AcrD/AcrF family 7 1019 3.0E-178 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 SUPERFAMILY SSF82714 189 267 9.16E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 Gene3D G3DSA:3.30.2090.10 186 274 7.1E-237 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 Gene3D G3DSA:3.30.2090.10 712 798 7.1E-237 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_17420 ca2a57bc6c4b69d14d22c32e33d57083 1059 SUPERFAMILY SSF82693 144 328 4.19E-10 T 14-10-2018 AMBLS11_11520 1bf94048a6da59bbec286094a1b780aa 76 SUPERFAMILY SSF47598 1 45 6.45E-12 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMBLS11_11520 1bf94048a6da59bbec286094a1b780aa 76 Gene3D G3DSA:1.10.8.1250 10 76 1.8E-9 T 14-10-2018 IPR038296 Antitoxin ParD superfamily AMBLS11_11520 1bf94048a6da59bbec286094a1b780aa 76 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 72 1.4E-6 T 14-10-2018 IPR022789 Antitoxin ParD AMBLS11_11520 1bf94048a6da59bbec286094a1b780aa 76 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 66 1.5E-15 T 14-10-2018 IPR022789 Antitoxin ParD AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 SUPERFAMILY SSF49303 221 332 1.61E-24 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 334 626 3.2E-112 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Pfam PF16353 Domain of unknown function(DUF4981) 639 727 4.4E-18 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 SUPERFAMILY SSF49785 11 218 3.54E-63 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 146 161 6.3E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 530 545 6.3E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 343 357 6.3E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 374 392 6.3E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 446 461 6.3E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Gene3D G3DSA:2.60.120.260 5 219 6.6E-81 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Gene3D G3DSA:2.70.98.10 744 1037 2.3E-87 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 SUPERFAMILY SSF49303 620 728 5.54E-23 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Pfam PF00703 Glycosyl hydrolases family 2 221 332 1.2E-17 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Gene3D G3DSA:3.20.20.80 333 622 6.0E-124 T 14-10-2018 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 384 409 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Gene3D G3DSA:2.60.40.10 220 332 5.6E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 446 460 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 SUPERFAMILY SSF74650 748 1034 8.48E-88 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Gene3D G3DSA:2.60.40.10 624 735 2.9E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 SUPERFAMILY SSF51445 334 620 1.11E-99 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 SMART SM01038 760 1035 1.3E-102 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 218 3.4E-56 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Pfam PF02929 Beta galactosidase small chain 768 1033 8.7E-64 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMBLS11_01060 e0185f230de10e98c579bdd04f34d5ba 1039 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1037 16.706 T 14-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMBLS11_18145 4991efcef55e01086d377c2846b65547 332 PIRSF PIRSF006621 1 328 1.3E-108 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMBLS11_18145 4991efcef55e01086d377c2846b65547 332 Pfam PF01207 Dihydrouridine synthase (Dus) 13 318 1.1E-116 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMBLS11_18145 4991efcef55e01086d377c2846b65547 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMBLS11_18145 4991efcef55e01086d377c2846b65547 332 Gene3D G3DSA:1.10.1200.80 252 327 1.0E-6 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AMBLS11_18145 4991efcef55e01086d377c2846b65547 332 Gene3D G3DSA:3.20.20.70 6 248 1.5E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_18145 4991efcef55e01086d377c2846b65547 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.769 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AMBLS11_18145 4991efcef55e01086d377c2846b65547 332 SUPERFAMILY SSF51395 10 318 1.87E-93 T 14-10-2018 AMBLS11_18145 4991efcef55e01086d377c2846b65547 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 1.2E-134 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AMBLS11_03405 d4e6ea866812f8188b1cb8cd6307287e 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 9.3E-98 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMBLS11_03405 d4e6ea866812f8188b1cb8cd6307287e 245 SUPERFAMILY SSF63892 4 241 5.89E-100 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMBLS11_03405 d4e6ea866812f8188b1cb8cd6307287e 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 130.599 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMBLS11_03405 d4e6ea866812f8188b1cb8cd6307287e 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 7.7E-104 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMBLS11_03405 d4e6ea866812f8188b1cb8cd6307287e 245 Gene3D G3DSA:3.20.20.70 1 244 8.4E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_07075 d584c5ba5a502f0307a72d7c4b24f2b5 431 Pfam PF04209 homogentisate 1,2-dioxygenase 5 425 1.3E-202 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AMBLS11_07075 d584c5ba5a502f0307a72d7c4b24f2b5 431 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 4 426 1.1E-202 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AMBLS11_07075 d584c5ba5a502f0307a72d7c4b24f2b5 431 SUPERFAMILY SSF51182 4 429 1.47E-160 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_07075 d584c5ba5a502f0307a72d7c4b24f2b5 431 Gene3D G3DSA:2.60.120.10 268 397 5.8E-64 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 SUPERFAMILY SSF55811 215 341 4.77E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 SMART SM00478 30 185 3.8E-48 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 26 160 1.3E-22 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 1 261 2.2E-112 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 Pfam PF14815 NUDIX domain 231 339 4.0E-20 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.8E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 SMART SM00525 186 206 2.5E-6 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 Gene3D G3DSA:3.90.79.10 218 342 1.9E-14 T 14-10-2018 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 Pfam PF00633 Helix-hairpin-helix motif 91 118 3.2E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 Gene3D G3DSA:1.10.340.30 12 123 7.5E-86 T 14-10-2018 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 SUPERFAMILY SSF48150 2 220 5.65E-76 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMBLS11_01095 9b54718d3737b6ce9c99d2dec7f8e002 342 Gene3D G3DSA:1.10.1670.10 1 206 7.5E-86 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 4.8E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 4.8E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 4.8E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 4.8E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 4.8E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 Gene3D G3DSA:1.10.730.10 573 684 9.4E-6 T 14-10-2018 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 SMART SM00836 584 686 0.0088 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 Pfam PF05746 DALR anticodon binding domain 581 683 1.4E-11 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 SUPERFAMILY SSF47323 583 680 2.88E-6 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 689 26.043 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 SUPERFAMILY SSF109604 339 490 3.45E-12 T 14-10-2018 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 549 3.1E-207 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00030 f20bf2c5a6f74694be7ca56f34af37e8 692 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 689 2.2E-266 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_11405 9b53bbc679c85b769002bf74eba2d058 146 SUPERFAMILY SSF46785 44 143 3.05E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_11405 9b53bbc679c85b769002bf74eba2d058 146 Gene3D G3DSA:1.10.10.10 26 146 9.1E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11405 9b53bbc679c85b769002bf74eba2d058 146 Pfam PF01638 HxlR-like helix-turn-helix 56 143 1.1E-36 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMBLS11_04705 067254e1d9f2b610f6b90f6e5c405ea6 238 SMART SM00858 116 178 1.5E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMBLS11_04705 067254e1d9f2b610f6b90f6e5c405ea6 238 Pfam PF13144 Chaperone for flagella basal body P-ring formation 40 235 1.8E-44 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMBLS11_04705 067254e1d9f2b610f6b90f6e5c405ea6 238 Gene3D G3DSA:2.30.30.760 180 238 2.5E-10 T 14-10-2018 AMBLS11_04705 067254e1d9f2b610f6b90f6e5c405ea6 238 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 104 236 7.1E-36 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMBLS11_04705 067254e1d9f2b610f6b90f6e5c405ea6 238 Gene3D G3DSA:3.90.1210.10 114 179 4.7E-6 T 14-10-2018 AMBLS11_07740 b4a9577a8a551f4d6bb9448b3319a584 85 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 6.2E-23 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AMBLS11_16585 10646a8a3afc403e40372698dd50a3f5 678 Gene3D G3DSA:1.10.1370.10 140 608 1.2E-262 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMBLS11_16585 10646a8a3afc403e40372698dd50a3f5 678 Pfam PF01432 Peptidase family M3 222 675 8.6E-155 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AMBLS11_16585 10646a8a3afc403e40372698dd50a3f5 678 SUPERFAMILY SSF55486 9 675 1.34E-202 T 14-10-2018 AMBLS11_16585 10646a8a3afc403e40372698dd50a3f5 678 Gene3D G3DSA:1.10.1370.40 15 673 1.2E-262 T 14-10-2018 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 23 470 3.2E-171 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 SMART SM00487 29 225 5.2E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 Pfam PF16124 RecQ zinc-binding 349 410 3.6E-14 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 SUPERFAMILY SSF52540 72 358 6.91E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 Pfam PF00271 Helicase conserved C-terminal domain 236 336 6.6E-21 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 SMART SM00341 535 613 2.2E-16 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 SUPERFAMILY SSF47819 535 611 7.41E-25 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 SMART SM00490 256 337 8.2E-28 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 Pfam PF00270 DEAD/DEAH box helicase 35 193 8.9E-23 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 Pfam PF00570 HRDC domain 540 605 3.3E-21 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 Pfam PF09382 RQC domain 412 521 8.9E-34 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 Gene3D G3DSA:3.40.50.300 11 215 4.5E-80 T 14-10-2018 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 Gene3D G3DSA:1.10.150.80 531 613 4.5E-25 T 14-10-2018 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 22 607 1.1E-243 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 SMART SM00956 417 520 5.3E-45 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 Gene3D G3DSA:3.40.50.300 217 415 1.5E-61 T 14-10-2018 AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 Gene3D G3DSA:1.10.10.10 416 530 7.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_00735 8f107640f9be5e181345b5a1fa6fa194 613 SUPERFAMILY SSF46785 408 529 7.35E-39 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_02660 a9a4d6bfe89a801172c8c9a682e2023f 157 Pfam PF02542 YgbB family 1 155 9.0E-66 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMBLS11_02660 a9a4d6bfe89a801172c8c9a682e2023f 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMBLS11_02660 a9a4d6bfe89a801172c8c9a682e2023f 157 Gene3D G3DSA:3.30.1330.50 1 157 1.6E-67 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMBLS11_02660 a9a4d6bfe89a801172c8c9a682e2023f 157 SUPERFAMILY SSF69765 1 156 5.63E-65 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMBLS11_02660 a9a4d6bfe89a801172c8c9a682e2023f 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 35.444 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMBLS11_02660 a9a4d6bfe89a801172c8c9a682e2023f 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 5.5E-69 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMBLS11_08445 4940ab5ef45e4117c28e1cb52a216ceb 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 22.986 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 AMBLS11_08445 4940ab5ef45e4117c28e1cb52a216ceb 87 Gene3D G3DSA:3.30.70.260 1 87 1.0E-28 T 14-10-2018 AMBLS11_08445 4940ab5ef45e4117c28e1cb52a216ceb 87 SUPERFAMILY SSF117991 1 87 1.28E-28 T 14-10-2018 IPR027471 YbeD-like domain superfamily AMBLS11_08445 4940ab5ef45e4117c28e1cb52a216ceb 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 1.4E-26 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 Gene3D G3DSA:2.40.160.20 26 173 6.9E-7 T 14-10-2018 AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 Gene3D G3DSA:3.30.1330.60 272 391 2.4E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 PRINTS PR01021 OMPA domain signature 332 348 3.0E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 PRINTS PR01021 OMPA domain signature 317 332 3.0E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 SUPERFAMILY SSF103647 180 263 4.05E-24 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 SUPERFAMILY SSF103088 256 388 5.76E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 Pfam PF02412 Thrombospondin type 3 repeat 182 200 0.0032 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 Pfam PF02412 Thrombospondin type 3 repeat 243 261 0.011 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 Pfam PF02412 Thrombospondin type 3 repeat 210 230 0.0017 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 AMBLS11_17365 812dde565db0cc46008cd429472efe76 398 Pfam PF00691 OmpA family 287 382 3.1E-17 T 14-10-2018 IPR006665 OmpA-like domain AMBLS11_16445 e97eee0634473a4f89eee2d419380963 246 SUPERFAMILY SSF55315 2 78 1.53E-18 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMBLS11_16445 e97eee0634473a4f89eee2d419380963 246 Pfam PF00588 SpoU rRNA Methylase family 98 238 5.0E-41 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMBLS11_16445 e97eee0634473a4f89eee2d419380963 246 Gene3D G3DSA:3.30.1330.30 1 78 2.8E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMBLS11_16445 e97eee0634473a4f89eee2d419380963 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 43.7 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AMBLS11_16445 e97eee0634473a4f89eee2d419380963 246 SMART SM00967 6 82 1.8E-16 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMBLS11_16445 e97eee0634473a4f89eee2d419380963 246 Gene3D G3DSA:3.40.1280.10 80 245 5.1E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMBLS11_16445 e97eee0634473a4f89eee2d419380963 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 244 1.1E-82 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AMBLS11_16445 e97eee0634473a4f89eee2d419380963 246 SUPERFAMILY SSF75217 70 244 6.54E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMBLS11_16445 e97eee0634473a4f89eee2d419380963 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 80 5.4E-17 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMBLS11_07000 e251d2b7127cc9923e2103ae34730d54 825 Pfam PF00343 Carbohydrate phosphorylase 104 818 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMBLS11_07000 e251d2b7127cc9923e2103ae34730d54 825 Gene3D G3DSA:3.40.50.2000 484 811 0.0 T 14-10-2018 AMBLS11_07000 e251d2b7127cc9923e2103ae34730d54 825 PIRSF PIRSF000460 2 825 2.3E-227 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMBLS11_07000 e251d2b7127cc9923e2103ae34730d54 825 Gene3D G3DSA:3.40.50.2000 25 818 0.0 T 14-10-2018 AMBLS11_07000 e251d2b7127cc9923e2103ae34730d54 825 SUPERFAMILY SSF53756 14 823 0.0 T 14-10-2018 AMBLS11_07000 e251d2b7127cc9923e2103ae34730d54 825 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 16 818 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMBLS11_07000 e251d2b7127cc9923e2103ae34730d54 825 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 662 674 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 SMART SM00354 1 71 7.6E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.3E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.0E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.0E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 Pfam PF13377 Periplasmic binding protein-like domain 169 329 3.0E-29 T 14-10-2018 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 SUPERFAMILY SSF47413 1 59 6.51E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 SUPERFAMILY SSF53822 61 330 5.62E-70 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 Gene3D G3DSA:3.40.50.2300 160 289 3.2E-65 T 14-10-2018 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 Gene3D G3DSA:3.40.50.2300 63 305 3.2E-65 T 14-10-2018 AMBLS11_00915 9de5781191dd3d28764fa9a6e58d11d4 333 Gene3D G3DSA:1.10.260.40 1 60 2.2E-25 T 14-10-2018 AMBLS11_03530 8ce198e71a3a47901074016025b70da5 421 SUPERFAMILY SSF81342 6 297 5.34E-88 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMBLS11_03530 8ce198e71a3a47901074016025b70da5 421 PIRSF PIRSF038885 1 421 1.9E-150 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AMBLS11_03530 8ce198e71a3a47901074016025b70da5 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 296 397 6.7E-40 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMBLS11_03530 8ce198e71a3a47901074016025b70da5 421 Pfam PF00033 Cytochrome b/b6/petB 24 211 5.6E-65 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMBLS11_03530 8ce198e71a3a47901074016025b70da5 421 Gene3D G3DSA:1.20.810.10 1 421 9.6E-144 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 AMBLS11_03530 8ce198e71a3a47901074016025b70da5 421 SUPERFAMILY SSF81648 298 412 4.36E-32 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMBLS11_02995 fc87fdf09660f5a4eaa24b48135d7040 532 SUPERFAMILY SSF55073 367 528 3.37E-45 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_02995 fc87fdf09660f5a4eaa24b48135d7040 532 Gene3D G3DSA:3.30.70.270 348 530 4.7E-54 T 14-10-2018 AMBLS11_02995 fc87fdf09660f5a4eaa24b48135d7040 532 SMART SM00267 351 529 2.7E-54 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_02995 fc87fdf09660f5a4eaa24b48135d7040 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 529 1.3E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_02995 fc87fdf09660f5a4eaa24b48135d7040 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 364 525 3.1E-44 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 635 36.634 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 Gene3D G3DSA:3.90.640.10 229 316 1.0E-167 T 14-10-2018 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 Gene3D G3DSA:3.30.420.40 180 366 1.0E-167 T 14-10-2018 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 SUPERFAMILY SSF100920 384 540 1.31E-61 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 8.7E-289 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 SUPERFAMILY SSF100934 534 606 3.33E-6 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 Gene3D G3DSA:1.20.1270.10 524 607 6.2E-28 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.1E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.1E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.1E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.1E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.1E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.1E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.1E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.1E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.1E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 SUPERFAMILY SSF53067 187 382 2.68E-67 T 14-10-2018 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 Gene3D G3DSA:2.60.34.10 383 523 4.1E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 Pfam PF00012 Hsp70 protein 4 602 7.8E-264 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 SUPERFAMILY SSF53067 4 184 3.33E-66 T 14-10-2018 AMBLS11_06670 0c8aeaf9c8b9a41079f00d065b350da9 641 Gene3D G3DSA:3.30.420.40 5 379 1.0E-167 T 14-10-2018 AMBLS11_05765 77e51452eff3746f4c452d3b5a3386ee 555 Pfam PF02225 PA domain 147 238 9.6E-8 T 14-10-2018 IPR003137 PA domain AMBLS11_05765 77e51452eff3746f4c452d3b5a3386ee 555 Gene3D G3DSA:3.50.30.30 113 302 3.9E-55 T 14-10-2018 AMBLS11_05765 77e51452eff3746f4c452d3b5a3386ee 555 SUPERFAMILY SSF52025 145 248 1.44E-6 T 14-10-2018 AMBLS11_05765 77e51452eff3746f4c452d3b5a3386ee 555 Gene3D G3DSA:3.40.630.10 69 512 3.9E-55 T 14-10-2018 AMBLS11_05765 77e51452eff3746f4c452d3b5a3386ee 555 SUPERFAMILY SSF53187 46 540 2.29E-67 T 14-10-2018 AMBLS11_05765 77e51452eff3746f4c452d3b5a3386ee 555 Pfam PF04389 Peptidase family M28 312 526 3.8E-46 T 14-10-2018 IPR007484 Peptidase M28 AMBLS11_06540 436629bce96cdd7611d356f8da75ed7a 578 SUPERFAMILY SSF56322 16 558 1.96E-145 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMBLS11_06540 436629bce96cdd7611d356f8da75ed7a 578 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 251 559 2.6E-156 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_06540 436629bce96cdd7611d356f8da75ed7a 578 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 200 9.2E-18 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_06540 436629bce96cdd7611d356f8da75ed7a 578 PRINTS PR00095 Anthranilate synthase component I signature 506 520 1.6E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_06540 436629bce96cdd7611d356f8da75ed7a 578 PRINTS PR00095 Anthranilate synthase component I signature 397 410 1.6E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_06540 436629bce96cdd7611d356f8da75ed7a 578 PRINTS PR00095 Anthranilate synthase component I signature 491 505 1.6E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_06540 436629bce96cdd7611d356f8da75ed7a 578 PRINTS PR00095 Anthranilate synthase component I signature 411 424 1.6E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_06540 436629bce96cdd7611d356f8da75ed7a 578 Pfam PF00425 chorismate binding enzyme 289 549 7.8E-84 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMBLS11_06540 436629bce96cdd7611d356f8da75ed7a 578 Gene3D G3DSA:3.60.120.10 9 566 1.1E-171 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMBLS11_10750 a0865cffd8f0aba2a07aff28517ee95b 346 SUPERFAMILY SSF51726 4 339 5.36E-68 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMBLS11_10750 a0865cffd8f0aba2a07aff28517ee95b 346 Gene3D G3DSA:3.20.20.210 1 343 2.1E-131 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMBLS11_10750 a0865cffd8f0aba2a07aff28517ee95b 346 PIRSF PIRSF005632 1 343 4.9E-191 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AMBLS11_10750 a0865cffd8f0aba2a07aff28517ee95b 346 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 330 3.0E-34 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 449 1.4E-69 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 5.9E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 5.9E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 5.9E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 5.9E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 Gene3D G3DSA:1.10.285.10 8 384 3.9E-152 T 14-10-2018 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 SUPERFAMILY SSF51735 202 450 2.03E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 SMART SM00839 204 449 6.3E-63 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 Gene3D G3DSA:3.40.50.10860 55 190 3.9E-152 T 14-10-2018 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 PIRSF PIRSF000185 22 450 1.4E-106 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 185 2.7E-50 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 SUPERFAMILY SSF53223 8 196 6.08E-68 T 14-10-2018 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 Gene3D G3DSA:3.40.50.720 209 373 3.9E-152 T 14-10-2018 AMBLS11_08575 dc27c5c8ec3ab69e2528ac0ac325a084 450 Gene3D G3DSA:1.10.285.10 396 450 4.7E-7 T 14-10-2018 AMBLS11_13335 23b5cfeebc015048c8e6dc32ffc5f3c9 294 Pfam PF01841 Transglutaminase-like superfamily 153 246 2.5E-14 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_13335 23b5cfeebc015048c8e6dc32ffc5f3c9 294 Gene3D G3DSA:3.10.620.30 107 258 4.4E-18 T 14-10-2018 AMBLS11_13335 23b5cfeebc015048c8e6dc32ffc5f3c9 294 SMART SM00460 184 248 7.7E-13 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_13335 23b5cfeebc015048c8e6dc32ffc5f3c9 294 SUPERFAMILY SSF54001 147 247 1.72E-18 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMBLS11_15860 72b7ad9e80d9bb92652583f8e4bb218d 223 SMART SM00100 7 129 8.3E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMBLS11_15860 72b7ad9e80d9bb92652583f8e4bb218d 223 Pfam PF00027 Cyclic nucleotide-binding domain 27 114 9.5E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMBLS11_15860 72b7ad9e80d9bb92652583f8e4bb218d 223 Gene3D G3DSA:1.10.10.10 141 217 9.4E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15860 72b7ad9e80d9bb92652583f8e4bb218d 223 Pfam PF13545 Crp-like helix-turn-helix domain 148 211 4.1E-7 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMBLS11_15860 72b7ad9e80d9bb92652583f8e4bb218d 223 SUPERFAMILY SSF46785 148 214 5.11E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_15860 72b7ad9e80d9bb92652583f8e4bb218d 223 SUPERFAMILY SSF51206 12 138 1.15E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMBLS11_15860 72b7ad9e80d9bb92652583f8e4bb218d 223 Gene3D G3DSA:2.60.120.10 8 130 1.1E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 Pfam PF00162 Phosphoglycerate kinase 6 378 1.3E-146 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 388 39.981 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 SUPERFAMILY SSF53748 4 388 2.71E-149 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PIRSF PIRSF000724 1 391 6.9E-142 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.6E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.6E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.6E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.6E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.6E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 1.6E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 1.6E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 1.6E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 Gene3D G3DSA:3.40.50.1260 8 386 3.0E-156 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03780 7d8c02498565ff009ad90e1d89ae018e 391 Gene3D G3DSA:3.40.50.1260 165 378 3.0E-156 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_12980 4bd8cdf54bd5f52682b4c67a49ca7520 370 Gene3D G3DSA:3.20.20.105 1 364 5.7E-170 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMBLS11_12980 4bd8cdf54bd5f52682b4c67a49ca7520 370 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 365 1.7E-175 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMBLS11_12980 4bd8cdf54bd5f52682b4c67a49ca7520 370 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 57.002 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMBLS11_12980 4bd8cdf54bd5f52682b4c67a49ca7520 370 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 359 3.2E-93 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMBLS11_12980 4bd8cdf54bd5f52682b4c67a49ca7520 370 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 364 3.8E-168 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMBLS11_12980 4bd8cdf54bd5f52682b4c67a49ca7520 370 SUPERFAMILY SSF51713 1 362 1.26E-163 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMBLS11_00155 44bb47a2382ac28440875e745f591aed 279 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 3.1E-72 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMBLS11_00155 44bb47a2382ac28440875e745f591aed 279 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 192 6.2E-13 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMBLS11_00155 44bb47a2382ac28440875e745f591aed 279 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 89 2.1E-19 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMBLS11_00155 44bb47a2382ac28440875e745f591aed 279 SUPERFAMILY SSF53223 1 102 5.76E-26 T 14-10-2018 AMBLS11_00155 44bb47a2382ac28440875e745f591aed 279 Gene3D G3DSA:3.40.50.10860 5 255 4.7E-76 T 14-10-2018 AMBLS11_00155 44bb47a2382ac28440875e745f591aed 279 Gene3D G3DSA:3.40.50.720 103 246 4.7E-76 T 14-10-2018 AMBLS11_00155 44bb47a2382ac28440875e745f591aed 279 SUPERFAMILY SSF51735 103 270 2.09E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_00155 44bb47a2382ac28440875e745f591aed 279 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 271 29.765 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMBLS11_17670 bbaa55ee25502a3d923eb761f3154a58 339 Pfam PF10082 Putative beta-barrel porin 2 264 338 4.1E-6 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 AMBLS11_13265 e0dca8892af2c0bd6e53446c6394240d 749 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 70 162 3.2E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMBLS11_13265 e0dca8892af2c0bd6e53446c6394240d 749 SUPERFAMILY SSF56645 48 285 9.69E-46 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_13265 e0dca8892af2c0bd6e53446c6394240d 749 Gene3D G3DSA:1.20.140.10 290 435 6.6E-91 T 14-10-2018 AMBLS11_13265 e0dca8892af2c0bd6e53446c6394240d 749 SUPERFAMILY SSF47203 290 445 7.25E-23 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_13265 e0dca8892af2c0bd6e53446c6394240d 749 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 167 267 1.5E-10 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMBLS11_13265 e0dca8892af2c0bd6e53446c6394240d 749 Gene3D G3DSA:2.40.110.10 166 289 6.6E-91 T 14-10-2018 AMBLS11_13265 e0dca8892af2c0bd6e53446c6394240d 749 Gene3D G3DSA:1.10.540.10 53 165 6.6E-91 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMBLS11_13265 e0dca8892af2c0bd6e53446c6394240d 749 Pfam PF09317 Domain of unknown function (DUF1974) 444 726 3.3E-79 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AMBLS11_13265 e0dca8892af2c0bd6e53446c6394240d 749 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 433 6.4E-13 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_06050 5e11c9af55e50de35a76af1640c27fc6 110 SUPERFAMILY SSF55159 8 106 1.22E-22 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 AMBLS11_06050 5e11c9af55e50de35a76af1640c27fc6 110 Gene3D G3DSA:3.30.780.10 30 110 1.6E-30 T 14-10-2018 AMBLS11_06050 5e11c9af55e50de35a76af1640c27fc6 110 PIRSF PIRSF037511 1 110 8.8E-33 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AMBLS11_06050 5e11c9af55e50de35a76af1640c27fc6 110 Pfam PF01253 Translation initiation factor SUI1 34 104 6.7E-17 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AMBLS11_06050 5e11c9af55e50de35a76af1640c27fc6 110 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 9 110 1.3E-35 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AMBLS11_01975 c86798f944967025574637fe22a2c9da 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMBLS11_01975 c86798f944967025574637fe22a2c9da 225 Gene3D G3DSA:3.20.20.70 5 221 9.3E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_01975 c86798f944967025574637fe22a2c9da 225 PIRSF PIRSF001461 1 225 8.0E-104 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMBLS11_01975 c86798f944967025574637fe22a2c9da 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.0E-89 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMBLS11_01975 c86798f944967025574637fe22a2c9da 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMBLS11_01975 c86798f944967025574637fe22a2c9da 225 SUPERFAMILY SSF51366 4 218 4.05E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMBLS11_01975 c86798f944967025574637fe22a2c9da 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.8E-96 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 Gene3D G3DSA:3.30.2090.10 714 802 9.4E-268 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 6.6E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 6.6E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.6E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.6E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 6.6E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.6E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.6E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 Pfam PF00873 AcrB/AcrD/AcrF family 6 1032 1.3E-237 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 SUPERFAMILY SSF82714 716 799 5.23E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 SUPERFAMILY SSF82866 294 499 3.01E-40 T 14-10-2018 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 SUPERFAMILY SSF82693 46 128 1.02E-20 T 14-10-2018 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 Gene3D G3DSA:3.30.70.1440 663 860 9.4E-268 T 14-10-2018 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 Gene3D G3DSA:3.30.2090.10 181 272 9.4E-268 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 Gene3D G3DSA:1.20.1640.10 12 509 9.4E-268 T 14-10-2018 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 Gene3D G3DSA:1.20.1640.10 510 1030 9.4E-268 T 14-10-2018 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 Gene3D G3DSA:3.30.70.1430 560 662 9.4E-268 T 14-10-2018 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 Gene3D G3DSA:3.30.70.1430 42 810 9.4E-268 T 14-10-2018 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 SUPERFAMILY SSF82866 800 1037 1.44E-45 T 14-10-2018 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 Gene3D G3DSA:3.30.70.1320 135 330 9.4E-268 T 14-10-2018 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 SUPERFAMILY SSF82714 185 269 4.05E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AMBLS11_01230 541a62ca6f9b0a2877f55e642f93006f 1045 SUPERFAMILY SSF82693 137 328 4.19E-23 T 14-10-2018 AMBLS11_16595 f82e3188f2ce5586e2809b578f4feebc 274 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 28 258 1.3E-49 T 14-10-2018 AMBLS11_16595 f82e3188f2ce5586e2809b578f4feebc 274 Gene3D G3DSA:3.40.190.10 28 236 2.1E-36 T 14-10-2018 AMBLS11_16595 f82e3188f2ce5586e2809b578f4feebc 274 SUPERFAMILY SSF53850 22 245 5.25E-21 T 14-10-2018 AMBLS11_16595 f82e3188f2ce5586e2809b578f4feebc 274 Gene3D G3DSA:3.40.190.10 107 207 2.1E-36 T 14-10-2018 AMBLS11_00805 6f104499c5ae9146e23539873f604931 355 Pfam PF13528 Glycosyl transferase family 1 1 301 3.0E-36 T 14-10-2018 AMBLS11_00805 6f104499c5ae9146e23539873f604931 355 SUPERFAMILY SSF53756 10 282 6.28E-8 T 14-10-2018 AMBLS11_00805 6f104499c5ae9146e23539873f604931 355 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 307 1.7E-73 T 14-10-2018 IPR005262 Conserved hypothetical protein CHP00661 AMBLS11_15235 68becf2fec8f1603600b9ef3204a67fd 260 Pfam PF01061 ABC-2 type transporter 8 224 1.2E-34 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMBLS11_15235 68becf2fec8f1603600b9ef3204a67fd 260 PIRSF PIRSF006648 6 255 1.1E-44 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_15235 68becf2fec8f1603600b9ef3204a67fd 260 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 3 253 3.1E-122 T 14-10-2018 IPR022403 Alcohol ABC transporter, permease protein AMBLS11_15235 68becf2fec8f1603600b9ef3204a67fd 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 24 45 1.4E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_15235 68becf2fec8f1603600b9ef3204a67fd 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 141 165 1.4E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_15235 68becf2fec8f1603600b9ef3204a67fd 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 178 197 1.4E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 SUPERFAMILY SSF81624 2 138 1.23E-39 T 14-10-2018 IPR035937 MutM-like, N-terminal AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 SUPERFAMILY SSF46946 130 221 3.53E-29 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 Gene3D G3DSA:1.10.8.50 131 269 1.9E-47 T 14-10-2018 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.7E-33 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 SUPERFAMILY SSF57716 217 268 8.76E-17 T 14-10-2018 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 SMART SM00898 2 115 1.4E-52 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.1E-93 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 SMART SM01232 129 221 3.5E-45 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 Gene3D G3DSA:3.20.190.10 2 127 1.7E-40 T 14-10-2018 IPR035937 MutM-like, N-terminal AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.819 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 6.3E-25 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMBLS11_00265 9f2a53e56f1cd877383df586e35e1dc1 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 9.1E-11 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 1.1E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 1.1E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.1E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 248 270 1.1E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 1.1E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.1E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 219 231 1.1E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.1E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 1.1E-65 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 Gene3D G3DSA:3.40.50.460 144 260 7.3E-92 T 14-10-2018 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 PIRSF PIRSF000532 1 332 3.5E-103 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 Pfam PF00365 Phosphofructokinase 4 283 1.7E-92 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 ProSitePatterns PS00433 Phosphofructokinase signature. 252 270 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 SUPERFAMILY SSF53784 3 318 3.66E-99 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMBLS11_09135 20ff3e216555ccd939fc6608c4f5fde1 334 Gene3D G3DSA:3.40.50.450 4 294 7.3E-92 T 14-10-2018 AMBLS11_08045 1aa3a9e017568b625b9419b91434484b 328 Gene3D G3DSA:2.30.30.60 131 180 2.2E-12 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_08045 1aa3a9e017568b625b9419b91434484b 328 SUPERFAMILY SSF82689 184 282 5.1E-24 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMBLS11_08045 1aa3a9e017568b625b9419b91434484b 328 SUPERFAMILY SSF82861 28 114 1.05E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMBLS11_08045 1aa3a9e017568b625b9419b91434484b 328 SUPERFAMILY SSF50182 116 181 6.54E-15 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_08045 1aa3a9e017568b625b9419b91434484b 328 Gene3D G3DSA:3.30.70.100 184 277 3.7E-22 T 14-10-2018 AMBLS11_08045 1aa3a9e017568b625b9419b91434484b 328 Pfam PF00924 Mechanosensitive ion channel 71 271 5.8E-47 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_15745 685638ea7cff74367a1addc086b6248f 758 Pfam PF03170 Bacterial cellulose synthase subunit 24 654 3.1E-68 T 14-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AMBLS11_15745 685638ea7cff74367a1addc086b6248f 758 Gene3D G3DSA:2.60.120.260 22 153 7.1E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_15745 685638ea7cff74367a1addc086b6248f 758 Gene3D G3DSA:2.60.120.260 356 499 3.5E-30 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_02815 89c9e858a5fc6c4285296dee5133b79f 284 SUPERFAMILY SSF81324 17 232 2.2E-30 T 14-10-2018 AMBLS11_02815 89c9e858a5fc6c4285296dee5133b79f 284 Gene3D G3DSA:1.10.287.70 122 233 1.3E-31 T 14-10-2018 AMBLS11_02815 89c9e858a5fc6c4285296dee5133b79f 284 Pfam PF00520 Ion transport protein 16 234 8.0E-41 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AMBLS11_02815 89c9e858a5fc6c4285296dee5133b79f 284 Gene3D G3DSA:1.20.120.350 7 121 3.3E-25 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 8.3E-37 T 14-10-2018 IPR003004 GspF/PilC family AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 8.3E-37 T 14-10-2018 IPR003004 GspF/PilC family AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 8.3E-37 T 14-10-2018 IPR003004 GspF/PilC family AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 8.3E-37 T 14-10-2018 IPR003004 GspF/PilC family AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 406 4.1E-160 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 Gene3D G3DSA:1.20.81.30 260 369 3.9E-25 T 14-10-2018 AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 1.6E-30 T 14-10-2018 IPR018076 Type II secretion system F domain AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 6.8E-25 T 14-10-2018 IPR018076 Type II secretion system F domain AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AMBLS11_18240 34ea6cc39c3b92df0acff18ec8b6804f 408 Gene3D G3DSA:1.20.81.30 58 175 2.5E-32 T 14-10-2018 AMBLS11_14165 3c844922255a09c034b1f9b2b31f6041 374 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 151 218 1.1E-14 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMBLS11_14165 3c844922255a09c034b1f9b2b31f6041 374 Gene3D G3DSA:3.40.47.10 1 214 1.6E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_14165 3c844922255a09c034b1f9b2b31f6041 374 SUPERFAMILY SSF53901 3 373 6.18E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_14165 3c844922255a09c034b1f9b2b31f6041 374 Gene3D G3DSA:3.40.47.10 219 374 6.9E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_14165 3c844922255a09c034b1f9b2b31f6041 374 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 283 372 6.2E-19 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMBLS11_00870 b5399a00a5524c35e53019d6fe5d594b 631 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 91 4.2E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_00870 b5399a00a5524c35e53019d6fe5d594b 631 SUPERFAMILY SSF75011 154 354 6.15E-7 T 14-10-2018 AMBLS11_00870 b5399a00a5524c35e53019d6fe5d594b 631 Gene3D G3DSA:1.10.10.10 2 102 1.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_00870 b5399a00a5524c35e53019d6fe5d594b 631 SUPERFAMILY SSF46894 3 92 1.84E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_00870 b5399a00a5524c35e53019d6fe5d594b 631 SMART SM00862 20 91 4.3E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_03940 9caaf54a400b36da7abba851b92e6211 247 Gene3D G3DSA:2.40.50.40 138 208 1.5E-13 T 14-10-2018 AMBLS11_03940 9caaf54a400b36da7abba851b92e6211 247 Pfam PF00072 Response regulator receiver domain 6 110 4.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03940 9caaf54a400b36da7abba851b92e6211 247 Pfam PF04397 LytTr DNA-binding domain 152 238 3.9E-15 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_03940 9caaf54a400b36da7abba851b92e6211 247 Gene3D G3DSA:3.40.50.2300 2 122 1.4E-25 T 14-10-2018 AMBLS11_03940 9caaf54a400b36da7abba851b92e6211 247 SMART SM00448 3 111 2.3E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03940 9caaf54a400b36da7abba851b92e6211 247 SMART SM00850 148 239 7.5E-20 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_03940 9caaf54a400b36da7abba851b92e6211 247 SUPERFAMILY SSF52172 4 120 4.27E-24 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_17300 0582c764a0dd663cd2e20a93fe76dd81 184 SUPERFAMILY SSF118116 31 158 1.83E-5 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily AMBLS11_06750 f9dd0c83f03c56157ebb5751ea16ed23 432 SUPERFAMILY SSF51338 30 428 1.71E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_06750 f9dd0c83f03c56157ebb5751ea16ed23 432 Gene3D G3DSA:3.20.20.140 88 389 7.1E-148 T 14-10-2018 AMBLS11_06750 f9dd0c83f03c56157ebb5751ea16ed23 432 Gene3D G3DSA:2.30.40.10 36 426 7.1E-148 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_06750 f9dd0c83f03c56157ebb5751ea16ed23 432 SUPERFAMILY SSF51556 86 386 2.77E-107 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_06750 f9dd0c83f03c56157ebb5751ea16ed23 432 Pfam PF01979 Amidohydrolase family 82 427 1.1E-52 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 15 181 5.5E-36 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 Gene3D G3DSA:3.40.50.720 2 214 9.4E-46 T 14-10-2018 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 SUPERFAMILY SSF48179 211 507 3.0E-122 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 288 300 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 SUPERFAMILY SSF51735 14 181 7.07E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 PIRSF PIRSF000109 9 513 1.5E-185 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 83 112 3.4E-37 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 284 311 3.4E-37 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 14 37 3.4E-37 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 393 415 3.4E-37 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 SMART SM01350 213 506 1.0E-209 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 15 507 7.2E-182 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 Gene3D G3DSA:1.20.5.320 472 506 9.1E-18 T 14-10-2018 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 213 505 1.3E-127 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMBLS11_10985 967e00b2a932768d4048c2b3e36e8eaf 517 Gene3D G3DSA:1.10.1040.10 215 471 4.1E-105 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMBLS11_12890 8a67712f58566226f9331bb3d4d4ad01 177 Pfam PF01883 Iron-sulfur cluster assembly protein 79 153 2.0E-19 T 14-10-2018 IPR002744 MIP18 family-like AMBLS11_12890 8a67712f58566226f9331bb3d4d4ad01 177 Gene3D G3DSA:3.30.300.130 72 176 2.5E-34 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMBLS11_12890 8a67712f58566226f9331bb3d4d4ad01 177 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 6 175 1.1E-75 T 14-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative AMBLS11_12890 8a67712f58566226f9331bb3d4d4ad01 177 SUPERFAMILY SSF117916 77 173 1.24E-30 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 Gene3D G3DSA:3.30.70.3280 390 529 6.0E-51 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 174 2.5E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 SUPERFAMILY SSF52540 9 277 1.16E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 Gene3D G3DSA:3.40.50.300 110 275 5.7E-115 T 14-10-2018 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.5E-45 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 SUPERFAMILY SSF54980 393 468 2.77E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 Pfam PF00009 Elongation factor Tu GTP binding domain 12 277 4.9E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.041 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 7.6E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 SUPERFAMILY SSF50447 262 393 6.13E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 528 9.7E-298 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AMBLS11_05440 531c9d54278b7cef0eeb4421e05a0860 529 Gene3D G3DSA:3.40.50.300 72 379 5.7E-115 T 14-10-2018 AMBLS11_18300 c0d6fec68590f4856aae7aa96e69c948 194 Gene3D G3DSA:3.90.950.10 7 194 4.4E-51 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMBLS11_18300 c0d6fec68590f4856aae7aa96e69c948 194 Pfam PF01931 Protein of unknown function DUF84 22 186 1.2E-51 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AMBLS11_18300 c0d6fec68590f4856aae7aa96e69c948 194 SUPERFAMILY SSF52972 18 192 1.09E-50 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 PRINTS PR01010 Flagellar P-ring protein signature 38 53 5.8E-75 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 PRINTS PR01010 Flagellar P-ring protein signature 187 205 5.8E-75 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 PRINTS PR01010 Flagellar P-ring protein signature 120 138 5.8E-75 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 PRINTS PR01010 Flagellar P-ring protein signature 81 100 5.8E-75 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 PRINTS PR01010 Flagellar P-ring protein signature 161 179 5.8E-75 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 PRINTS PR01010 Flagellar P-ring protein signature 23 38 5.8E-75 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 PRINTS PR01010 Flagellar P-ring protein signature 55 70 5.8E-75 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 PRINTS PR01010 Flagellar P-ring protein signature 103 120 5.8E-75 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 Pfam PF02119 Flagellar P-ring protein 23 369 2.7E-134 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_04755 3a0d58480f2017b8f67a6b96c5ef0486 370 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 370 38.467 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMBLS11_12920 34b6027a537241b591f8761a9cc51a19 388 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMBLS11_12920 34b6027a537241b591f8761a9cc51a19 388 Gene3D G3DSA:3.90.1150.10 7 376 2.8E-160 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_12920 34b6027a537241b591f8761a9cc51a19 388 Gene3D G3DSA:3.40.640.10 18 264 2.8E-160 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_12920 34b6027a537241b591f8761a9cc51a19 388 PIRSF PIRSF005572 4 386 5.6E-133 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMBLS11_12920 34b6027a537241b591f8761a9cc51a19 388 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 3 387 48.996 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AMBLS11_12920 34b6027a537241b591f8761a9cc51a19 388 SUPERFAMILY SSF53383 6 378 4.6E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_12920 34b6027a537241b591f8761a9cc51a19 388 Pfam PF00266 Aminotransferase class-V 7 371 2.3E-85 T 14-10-2018 IPR000192 Aminotransferase class V domain AMBLS11_14295 48c165af7e8803bf308f0a87bb7069e2 98 SUPERFAMILY SSF54928 1 63 1.3E-19 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AMBLS11_14295 48c165af7e8803bf308f0a87bb7069e2 98 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1 54 1.6E-13 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AMBLS11_14295 48c165af7e8803bf308f0a87bb7069e2 98 SMART SM00360 1 56 2.0E-5 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AMBLS11_14295 48c165af7e8803bf308f0a87bb7069e2 98 Gene3D G3DSA:3.30.70.330 1 68 2.9E-19 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 342 37.704 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.5E-35 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 SUPERFAMILY SSF55307 204 320 5.49E-41 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 Gene3D G3DSA:3.30.1330.20 221 327 1.8E-33 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 Gene3D G3DSA:3.40.50.1440 4 220 3.2E-80 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 SUPERFAMILY SSF52490 14 205 1.22E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 SMART SM00864 13 205 4.0E-113 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 6.2E-41 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 SMART SM00865 207 325 5.4E-54 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.7E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.7E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.7E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.7E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMBLS11_14015 e8eceeaed6447e272c99b4c8c119efbe 388 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 327 1.2E-134 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AMBLS11_02055 b5abcf14a261b1a16393435ea636af77 285 SUPERFAMILY SSF52833 42 132 2.58E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_02055 b5abcf14a261b1a16393435ea636af77 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 67 128 4.5E-7 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_02055 b5abcf14a261b1a16393435ea636af77 285 Gene3D G3DSA:3.40.30.10 19 256 1.8E-106 T 14-10-2018 AMBLS11_02055 b5abcf14a261b1a16393435ea636af77 285 Gene3D G3DSA:1.20.1050.10 134 250 1.8E-106 T 14-10-2018 AMBLS11_02055 b5abcf14a261b1a16393435ea636af77 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 178 245 8.3E-8 T 14-10-2018 AMBLS11_02055 b5abcf14a261b1a16393435ea636af77 285 SUPERFAMILY SSF47616 118 260 9.01E-33 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_09035 8c9407477c80dfa851d4b38c7ae816ea 253 SUPERFAMILY SSF102705 4 252 7.19E-81 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AMBLS11_09035 8c9407477c80dfa851d4b38c7ae816ea 253 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 241 2.3E-60 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMBLS11_09035 8c9407477c80dfa851d4b38c7ae816ea 253 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 252 1.1E-66 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMBLS11_09035 8c9407477c80dfa851d4b38c7ae816ea 253 Gene3D G3DSA:3.40.1390.30 99 224 1.3E-82 T 14-10-2018 AMBLS11_09035 8c9407477c80dfa851d4b38c7ae816ea 253 Gene3D G3DSA:3.40.1390.30 16 238 1.3E-82 T 14-10-2018 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 302 323 3.9E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 113 128 3.9E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 165 3.9E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 144 3.9E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 SMART SM00836 459 576 4.7E-33 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 Pfam PF00750 tRNA synthetases class I (R) 103 445 3.9E-133 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 Pfam PF05746 DALR anticodon binding domain 459 576 1.7E-29 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 121 132 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 9 86 4.9E-23 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 SUPERFAMILY SSF52374 109 452 1.97E-89 T 14-10-2018 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 Gene3D G3DSA:3.30.1360.70 1 105 6.7E-31 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 Gene3D G3DSA:1.10.730.10 453 576 1.3E-33 T 14-10-2018 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 SMART SM01016 5 86 6.8E-29 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 26.998 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 SUPERFAMILY SSF47323 454 576 4.25E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 SUPERFAMILY SSF55190 1 95 1.27E-21 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 1.0E-174 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMBLS11_05445 30ecfbb4c26f54bb149513274cbe0010 576 Gene3D G3DSA:3.40.50.620 106 452 6.1E-108 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_05405 59b01eb49d663fb33b057fff30417992 302 SUPERFAMILY SSF51679 41 301 3.53E-50 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMBLS11_05405 59b01eb49d663fb33b057fff30417992 302 Gene3D G3DSA:3.20.20.30 3 302 2.6E-71 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMBLS11_05405 59b01eb49d663fb33b057fff30417992 302 Pfam PF00296 Luciferase-like monooxygenase 36 228 1.1E-29 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMBLS11_05405 59b01eb49d663fb33b057fff30417992 302 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 6 300 2.5E-98 T 14-10-2018 IPR020020 Luciferase-type oxidoreductase AMBLS11_08860 df7c0f8f744ac4f0729f1d7fa84f1b60 320 PIRSF PIRSF015753 5 317 9.1E-141 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 AMBLS11_08860 df7c0f8f744ac4f0729f1d7fa84f1b60 320 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 151 5.8E-22 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_08860 df7c0f8f744ac4f0729f1d7fa84f1b60 320 SUPERFAMILY SSF47616 176 317 2.92E-36 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_08860 df7c0f8f744ac4f0729f1d7fa84f1b60 320 Gene3D G3DSA:3.40.30.130 6 171 7.0E-67 T 14-10-2018 AMBLS11_08860 df7c0f8f744ac4f0729f1d7fa84f1b60 320 SUPERFAMILY SSF52833 32 154 1.79E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_08860 df7c0f8f744ac4f0729f1d7fa84f1b60 320 Gene3D G3DSA:1.20.1050.10 172 320 5.0E-71 T 14-10-2018 AMBLS11_08860 df7c0f8f744ac4f0729f1d7fa84f1b60 320 Pfam PF13410 Glutathione S-transferase, C-terminal domain 197 268 9.9E-12 T 14-10-2018 AMBLS11_05070 e3716d9be287c5960b11b8dcf9b0e3fa 376 Pfam PF01339 CheB methylesterase 191 370 1.3E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMBLS11_05070 e3716d9be287c5960b11b8dcf9b0e3fa 376 PIRSF PIRSF000876 1 376 1.9E-126 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMBLS11_05070 e3716d9be287c5960b11b8dcf9b0e3fa 376 SUPERFAMILY SSF52738 185 372 9.68E-61 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMBLS11_05070 e3716d9be287c5960b11b8dcf9b0e3fa 376 SUPERFAMILY SSF52172 3 109 1.04E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_05070 e3716d9be287c5960b11b8dcf9b0e3fa 376 Gene3D G3DSA:3.40.50.180 180 376 2.5E-63 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMBLS11_05070 e3716d9be287c5960b11b8dcf9b0e3fa 376 Pfam PF00072 Response regulator receiver domain 5 109 7.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_05070 e3716d9be287c5960b11b8dcf9b0e3fa 376 Gene3D G3DSA:3.40.50.2300 3 131 3.7E-32 T 14-10-2018 AMBLS11_05070 e3716d9be287c5960b11b8dcf9b0e3fa 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 376 37.779 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMBLS11_05070 e3716d9be287c5960b11b8dcf9b0e3fa 376 SMART SM00448 3 126 7.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03695 a68b78fa500b84b02c9f97cfe3d68efb 491 Gene3D G3DSA:3.40.50.11290 230 327 1.9E-40 T 14-10-2018 AMBLS11_03695 a68b78fa500b84b02c9f97cfe3d68efb 491 Gene3D G3DSA:3.30.1490.270 364 424 1.4E-23 T 14-10-2018 AMBLS11_03695 a68b78fa500b84b02c9f97cfe3d68efb 491 PIRSF PIRSF005522 10 491 6.5E-221 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 AMBLS11_03695 a68b78fa500b84b02c9f97cfe3d68efb 491 Pfam PF14403 Circularly permuted ATP-grasp type 2 91 468 3.1E-163 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 AMBLS11_03695 a68b78fa500b84b02c9f97cfe3d68efb 491 SUPERFAMILY SSF56059 34 482 1.26E-64 T 14-10-2018 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 Gene3D G3DSA:3.30.450.20 5 126 6.9E-27 T 14-10-2018 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 Gene3D G3DSA:3.30.450.20 127 246 8.9E-30 T 14-10-2018 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SMART SM00086 326 367 0.0011 T 14-10-2018 IPR001610 PAC motif AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SMART SM00086 438 480 72.0 T 14-10-2018 IPR001610 PAC motif AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SMART SM00086 205 245 1.0 T 14-10-2018 IPR001610 PAC motif AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SMART SM00086 84 124 4.2 T 14-10-2018 IPR001610 PAC motif AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SUPERFAMILY SSF55785 140 250 1.13E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 479 577 2.1E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 129 8.0E-23 T 14-10-2018 IPR000014 PAS domain AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 125 250 5.0E-26 T 14-10-2018 IPR000014 PAS domain AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 251 370 4.5E-17 T 14-10-2018 IPR000014 PAS domain AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SMART SM00091 253 324 2.9E-5 T 14-10-2018 IPR000014 PAS domain AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SMART SM00091 8 74 7.6E-8 T 14-10-2018 IPR000014 PAS domain AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SMART SM00091 129 195 6.2E-7 T 14-10-2018 IPR000014 PAS domain AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SMART SM00283 405 579 5.2E-4 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SUPERFAMILY SSF58104 402 577 1.96E-40 T 14-10-2018 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SUPERFAMILY SSF55785 262 365 1.68E-23 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 536 565 1.6E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 507 534 1.6E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 Gene3D G3DSA:3.30.450.20 250 384 4.7E-33 T 14-10-2018 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 Gene3D G3DSA:1.10.287.950 451 579 3.1E-39 T 14-10-2018 AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 Pfam PF13426 PAS domain 264 365 1.2E-16 T 14-10-2018 IPR000014 PAS domain AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 Pfam PF13426 PAS domain 140 244 1.4E-13 T 14-10-2018 IPR000014 PAS domain AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 Pfam PF13426 PAS domain 21 123 1.9E-14 T 14-10-2018 IPR000014 PAS domain AMBLS11_15445 bd7a089b02de8814e095d01281d45ed3 580 SUPERFAMILY SSF55785 20 129 7.78E-23 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_00505 db592bd27530a72659621690938e1e88 390 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 52 381 1.4E-74 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AMBLS11_03175 55527d70f2d6971eea1bb8b7de603033 564 Pfam PF03571 Peptidase family M49 185 394 7.5E-14 T 14-10-2018 IPR039461 Peptidase family M49 AMBLS11_03175 55527d70f2d6971eea1bb8b7de603033 564 Gene3D G3DSA:1.20.120.1470 157 283 4.1E-6 T 14-10-2018 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 SUPERFAMILY SSF53067 8 221 1.78E-57 T 14-10-2018 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 SMART SM00842 10 196 3.0E-99 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 7.3E-154 T 14-10-2018 IPR020823 Cell division protein FtsA AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 PIRSF PIRSF003101 1 409 2.6E-153 T 14-10-2018 IPR020823 Cell division protein FtsA AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 Gene3D G3DSA:3.30.420.40 13 372 9.8E-120 T 14-10-2018 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 8.4E-32 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 Pfam PF14450 Cell division protein FtsA 207 374 9.4E-24 T 14-10-2018 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 409 29.75 T 14-10-2018 IPR020823 Cell division protein FtsA AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 Gene3D G3DSA:3.90.640.10 235 300 9.8E-120 T 14-10-2018 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 Pfam PF14450 Cell division protein FtsA 11 187 8.3E-8 T 14-10-2018 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 SUPERFAMILY SSF53067 198 377 2.79E-47 T 14-10-2018 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 Gene3D G3DSA:3.30.420.40 197 352 9.8E-120 T 14-10-2018 AMBLS11_14020 78fcd36ffe067801119ac692e01f9437 409 Gene3D G3DSA:3.30.1490.110 87 169 9.8E-120 T 14-10-2018 AMBLS11_05725 96dc2e35462175b58038cc79f133dbc0 193 PIRSF PIRSF006102 1 193 3.4E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMBLS11_05725 96dc2e35462175b58038cc79f133dbc0 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.0E-86 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AMBLS11_05725 96dc2e35462175b58038cc79f133dbc0 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 190 4.3E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMBLS11_05725 96dc2e35462175b58038cc79f133dbc0 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.827 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AMBLS11_16335 551146c7c40e5085d5316e293b82e36e 133 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.668 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16335 551146c7c40e5085d5316e293b82e36e 133 Gene3D G3DSA:3.90.1030.10 1 117 1.2E-47 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16335 551146c7c40e5085d5316e293b82e36e 133 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.9E-49 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16335 551146c7c40e5085d5316e293b82e36e 133 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16335 551146c7c40e5085d5316e293b82e36e 133 SUPERFAMILY SSF64263 1 119 1.96E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16335 551146c7c40e5085d5316e293b82e36e 133 Pfam PF01196 Ribosomal protein L17 20 116 3.4E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 67 180 6.5E-45 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 519 1005 3.8E-195 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 809 820 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 SUPERFAMILY SSF53720 559 1005 3.14E-126 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 Gene3D G3DSA:3.40.605.10 562 1007 2.5E-144 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 Gene3D G3DSA:3.40.309.10 784 976 2.5E-144 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 Pfam PF01619 Proline dehydrogenase 192 482 1.3E-94 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 SUPERFAMILY SSF81935 11 182 2.88E-60 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 SUPERFAMILY SSF51730 183 526 3.18E-114 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 SUPERFAMILY SSF53720 1034 1211 1.83E-12 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 Gene3D G3DSA:3.40.605.10 1015 1230 4.3E-10 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 Pfam PF00171 Aldehyde dehydrogenase family 563 1003 3.9E-118 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 Gene3D G3DSA:3.20.20.220 139 521 5.7E-135 T 14-10-2018 AMBLS11_02685 529f627ffd623a8c805ab4a25db4ce47 1265 PIRSF PIRSF000197 2 1261 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMBLS11_10965 4dd544009fc6b087e8893d901e975d5b 379 Pfam PF00246 Zinc carboxypeptidase 130 341 8.2E-24 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMBLS11_10965 4dd544009fc6b087e8893d901e975d5b 379 Gene3D G3DSA:2.60.40.3120 1 112 1.8E-43 T 14-10-2018 AMBLS11_10965 4dd544009fc6b087e8893d901e975d5b 379 SMART SM00631 112 354 2.2E-4 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMBLS11_10965 4dd544009fc6b087e8893d901e975d5b 379 Gene3D G3DSA:3.40.630.10 113 376 1.0E-70 T 14-10-2018 AMBLS11_10965 4dd544009fc6b087e8893d901e975d5b 379 SUPERFAMILY SSF53187 105 373 1.29E-60 T 14-10-2018 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 Pfam PF01316 Arginine repressor, DNA binding domain 5 73 5.3E-21 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 88 129 2.0E-16 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 SUPERFAMILY SSF46785 4 75 1.18E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 PRINTS PR01467 Bacterial arginine repressor signature 41 56 3.7E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 PRINTS PR01467 Bacterial arginine repressor signature 24 37 3.7E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 PRINTS PR01467 Bacterial arginine repressor signature 89 102 3.7E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 PRINTS PR01467 Bacterial arginine repressor signature 120 135 3.7E-23 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 Pfam PF02863 Arginine repressor, C-terminal domain 81 148 1.2E-22 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 Gene3D G3DSA:3.30.1360.40 74 154 9.1E-31 T 14-10-2018 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 Hamap MF_00173 Arginine repressor [argR]. 1 154 59.572 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 Gene3D G3DSA:1.10.10.10 1 73 2.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 150 7.5E-43 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMBLS11_15975 1a147a21c4b99daaee092ddefbb94732 154 SUPERFAMILY SSF55252 81 150 1.19E-19 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 AMBLS11_17995 d6e161a5e44534341bf45ab59d26fe8a 424 Pfam PF00589 Phage integrase family 250 399 1.6E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_17995 d6e161a5e44534341bf45ab59d26fe8a 424 SUPERFAMILY SSF56349 133 417 7.65E-44 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_17995 d6e161a5e44534341bf45ab59d26fe8a 424 Pfam PF13102 Phage integrase SAM-like domain 147 218 4.4E-6 T 14-10-2018 IPR025269 Phage integrase SAM-like domain AMBLS11_17995 d6e161a5e44534341bf45ab59d26fe8a 424 Gene3D G3DSA:1.10.150.130 126 237 5.0E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_17995 d6e161a5e44534341bf45ab59d26fe8a 424 Gene3D G3DSA:1.10.443.10 238 419 1.8E-24 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_05395 dfe84c9d0c2da53033bd7b23b65b99a5 298 Gene3D G3DSA:3.40.190.10 166 267 1.1E-54 T 14-10-2018 AMBLS11_05395 dfe84c9d0c2da53033bd7b23b65b99a5 298 SUPERFAMILY SSF46785 8 86 1.36E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_05395 dfe84c9d0c2da53033bd7b23b65b99a5 298 Pfam PF03466 LysR substrate binding domain 91 295 9.3E-39 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_05395 dfe84c9d0c2da53033bd7b23b65b99a5 298 Gene3D G3DSA:1.10.10.10 6 94 7.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05395 dfe84c9d0c2da53033bd7b23b65b99a5 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05395 dfe84c9d0c2da53033bd7b23b65b99a5 298 Gene3D G3DSA:3.40.190.10 95 292 1.1E-54 T 14-10-2018 AMBLS11_05395 dfe84c9d0c2da53033bd7b23b65b99a5 298 SUPERFAMILY SSF53850 93 296 2.95E-38 T 14-10-2018 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 Gene3D G3DSA:1.10.240.10 187 299 6.4E-141 T 14-10-2018 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 331 4.2E-115 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 4 332 41.756 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 Pfam PF00579 tRNA synthetases class I (W and Y) 4 286 7.4E-82 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 Gene3D G3DSA:3.40.50.620 7 330 6.4E-141 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.8E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 17 33 2.8E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 143 164 2.8E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 196 206 2.8E-29 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMBLS11_01970 083cbec06e9c73c9eaea0cfec2c16f75 335 SUPERFAMILY SSF52374 6 331 1.08E-99 T 14-10-2018 AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 532 45.98 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 Pfam PF02142 MGS-like domain 19 132 3.4E-29 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 Gene3D G3DSA:3.40.140.20 395 532 4.4E-62 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 463 3.6E-122 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 Gene3D G3DSA:3.40.140.20 220 372 8.6E-59 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 SUPERFAMILY SSF52335 6 197 3.4E-72 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 SUPERFAMILY SSF53927 223 532 1.7E-134 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 PIRSF PIRSF000414 1 532 4.5E-229 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 SMART SM00798 137 464 9.7E-223 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 532 9.8E-254 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 Gene3D G3DSA:3.40.50.1380 1 200 1.7E-85 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMBLS11_18155 59ad540d11836e6ba908d8838648a221 532 SMART SM00851 19 132 8.7E-59 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMBLS11_04460 61281d1e01bc1f59b7350eeb55c526f1 536 Gene3D G3DSA:1.10.3210.10 269 397 7.5E-6 T 14-10-2018 AMBLS11_04460 61281d1e01bc1f59b7350eeb55c526f1 536 SUPERFAMILY SSF109604 272 524 3.45E-10 T 14-10-2018 AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 149 1.2E-8 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 227 260 1.1E-5 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 150 184 2.0E-10 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 13 334 6.2E-110 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 111 139 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 Gene3D G3DSA:3.40.1390.10 3 102 3.7E-30 T 14-10-2018 AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 27 94 1.7E-20 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 SUPERFAMILY SSF51161 39 323 1.07E-83 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 Gene3D G3DSA:2.160.10.10 105 314 9.4E-62 T 14-10-2018 AMBLS11_12210 b09c064429f697e1207d2acfdf88257b 342 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 10 331 34.736 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AMBLS11_06420 b4b31f6f13aa306e97ad21001c71f03e 175 Gene3D G3DSA:3.40.630.30 2 174 2.6E-29 T 14-10-2018 AMBLS11_06420 b4b31f6f13aa306e97ad21001c71f03e 175 Pfam PF13302 Acetyltransferase (GNAT) domain 9 154 1.9E-25 T 14-10-2018 IPR000182 GNAT domain AMBLS11_06420 b4b31f6f13aa306e97ad21001c71f03e 175 SUPERFAMILY SSF55729 6 159 2.21E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_01500 ee54cb4223c3006b084511d7681a9393 121 SMART SM00448 3 116 6.0E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01500 ee54cb4223c3006b084511d7681a9393 121 Gene3D G3DSA:3.40.50.12740 1 121 4.9E-39 T 14-10-2018 AMBLS11_01500 ee54cb4223c3006b084511d7681a9393 121 SUPERFAMILY SSF52172 3 120 5.55E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_01500 ee54cb4223c3006b084511d7681a9393 121 Pfam PF00072 Response regulator receiver domain 5 115 2.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02470 508f52aa947c8851a59a229ab41a33ef 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 123 1.8E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMBLS11_02470 508f52aa947c8851a59a229ab41a33ef 128 Gene3D G3DSA:3.10.180.10 1 126 1.6E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_02470 508f52aa947c8851a59a229ab41a33ef 128 SUPERFAMILY SSF54593 1 127 1.18E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_03975 70816c40f67e43f768e303cdd9b7bfa6 473 Pfam PF03572 Peptidase family S41 246 452 3.0E-18 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMBLS11_03975 70816c40f67e43f768e303cdd9b7bfa6 473 SUPERFAMILY SSF52096 228 456 1.66E-26 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_03975 70816c40f67e43f768e303cdd9b7bfa6 473 Gene3D G3DSA:3.90.226.10 224 471 6.3E-18 T 14-10-2018 AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 PIRSF PIRSF000097 4 277 8.9E-72 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 126 143 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 SUPERFAMILY SSF51430 7 272 2.36E-82 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 Pfam PF00248 Aldo/keto reductase family 14 262 2.2E-49 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 PRINTS PR00069 Aldo-keto reductase signature 161 190 1.2E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 PRINTS PR00069 Aldo-keto reductase signature 93 111 1.2E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 PRINTS PR00069 Aldo-keto reductase signature 33 57 1.2E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 PRINTS PR00069 Aldo-keto reductase signature 126 143 1.2E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 PRINTS PR00069 Aldo-keto reductase signature 198 222 1.2E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMBLS11_05410 8fd908b2e2cfb6abb3a953970ed2794d 278 Gene3D G3DSA:3.20.20.100 3 274 7.8E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_09695 059f7bcc15a73bf559d1ba31734587e2 408 Gene3D G3DSA:1.10.443.10 208 391 2.3E-19 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_09695 059f7bcc15a73bf559d1ba31734587e2 408 Gene3D G3DSA:1.10.150.130 101 207 7.9E-27 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_09695 059f7bcc15a73bf559d1ba31734587e2 408 Gene3D G3DSA:3.30.160.390 1 100 1.4E-31 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMBLS11_09695 059f7bcc15a73bf559d1ba31734587e2 408 SUPERFAMILY SSF56349 102 389 5.59E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_09695 059f7bcc15a73bf559d1ba31734587e2 408 Pfam PF00589 Phage integrase family 209 378 1.2E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_09695 059f7bcc15a73bf559d1ba31734587e2 408 Pfam PF13356 Arm DNA-binding domain 3 87 4.2E-17 T 14-10-2018 IPR025166 Integrase, DNA-binding domain AMBLS11_13365 550da20b30f8b2c5f87c99c01a47fa6d 285 Gene3D G3DSA:2.40.128.270 46 172 1.1E-14 T 14-10-2018 IPR038670 HslJ-like superfamily AMBLS11_13365 550da20b30f8b2c5f87c99c01a47fa6d 285 Pfam PF03724 META domain 50 168 2.4E-19 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AMBLS11_13365 550da20b30f8b2c5f87c99c01a47fa6d 285 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 211 276 1.9E-10 T 14-10-2018 IPR018660 C-type lysozyme inhibitor AMBLS11_13365 550da20b30f8b2c5f87c99c01a47fa6d 285 SUPERFAMILY SSF141488 209 281 5.89E-13 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AMBLS11_13365 550da20b30f8b2c5f87c99c01a47fa6d 285 Gene3D G3DSA:2.40.128.200 207 285 6.5E-13 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily AMBLS11_08750 2b314489a0564d60c635aafe014eac84 230 PRINTS PR01374 Gram-negative bacterial tonB protein signature 166 184 1.7E-11 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_08750 2b314489a0564d60c635aafe014eac84 230 PRINTS PR01374 Gram-negative bacterial tonB protein signature 145 166 1.7E-11 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_08750 2b314489a0564d60c635aafe014eac84 230 PRINTS PR01374 Gram-negative bacterial tonB protein signature 185 202 1.7E-11 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_08750 2b314489a0564d60c635aafe014eac84 230 SUPERFAMILY SSF74653 143 223 1.7E-24 T 14-10-2018 AMBLS11_08750 2b314489a0564d60c635aafe014eac84 230 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 151 226 8.5E-20 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMBLS11_08750 2b314489a0564d60c635aafe014eac84 230 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 151 228 4.4E-18 T 14-10-2018 IPR006260 TonB/TolA, C-terminal AMBLS11_08750 2b314489a0564d60c635aafe014eac84 230 Gene3D G3DSA:3.30.1150.10 128 229 7.7E-28 T 14-10-2018 AMBLS11_07890 be1df0b26cf03b62a91ac31d7c42ba5b 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 2.1E-36 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AMBLS11_07890 be1df0b26cf03b62a91ac31d7c42ba5b 309 SUPERFAMILY SSF55048 128 198 2.88E-15 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMBLS11_07890 be1df0b26cf03b62a91ac31d7c42ba5b 309 Gene3D G3DSA:3.40.366.10 7 285 3.7E-101 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AMBLS11_07890 be1df0b26cf03b62a91ac31d7c42ba5b 309 PIRSF PIRSF000446 1 309 3.7E-124 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMBLS11_07890 be1df0b26cf03b62a91ac31d7c42ba5b 309 Pfam PF00698 Acyl transferase domain 7 284 7.3E-36 T 14-10-2018 IPR014043 Acyl transferase AMBLS11_07890 be1df0b26cf03b62a91ac31d7c42ba5b 309 SUPERFAMILY SSF52151 4 307 6.8E-79 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMBLS11_07890 be1df0b26cf03b62a91ac31d7c42ba5b 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.2E-116 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMBLS11_07890 be1df0b26cf03b62a91ac31d7c42ba5b 309 Gene3D G3DSA:3.30.70.250 124 198 3.7E-101 T 14-10-2018 AMBLS11_15820 b7ec658c9f7fc7e11fcbf0a22fea85de 350 SUPERFAMILY SSF46785 2 110 4.7E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_15820 b7ec658c9f7fc7e11fcbf0a22fea85de 350 SUPERFAMILY SSF53850 87 176 2.9E-11 T 14-10-2018 AMBLS11_15820 b7ec658c9f7fc7e11fcbf0a22fea85de 350 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_15820 b7ec658c9f7fc7e11fcbf0a22fea85de 350 SUPERFAMILY SSF53850 239 347 8.32E-5 T 14-10-2018 AMBLS11_15820 b7ec658c9f7fc7e11fcbf0a22fea85de 350 Pfam PF03466 LysR substrate binding domain 89 175 2.6E-11 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_15820 b7ec658c9f7fc7e11fcbf0a22fea85de 350 Gene3D G3DSA:1.10.10.10 5 70 3.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15820 b7ec658c9f7fc7e11fcbf0a22fea85de 350 Gene3D G3DSA:3.40.190.10 80 186 2.5E-10 T 14-10-2018 AMBLS11_16400 5c0e1bfda0154ac4c82dde40dfdefd39 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.2E-27 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16400 5c0e1bfda0154ac4c82dde40dfdefd39 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.314 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AMBLS11_16400 5c0e1bfda0154ac4c82dde40dfdefd39 101 Gene3D G3DSA:4.10.830.10 41 101 7.2E-24 T 14-10-2018 AMBLS11_16400 5c0e1bfda0154ac4c82dde40dfdefd39 101 SUPERFAMILY SSF57716 2 101 2.49E-39 T 14-10-2018 AMBLS11_16400 5c0e1bfda0154ac4c82dde40dfdefd39 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 Gene3D G3DSA:2.30.30.40 24 147 3.6E-27 T 14-10-2018 AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 SMART SM00448 179 300 1.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 SUPERFAMILY SSF50341 16 157 7.46E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 Gene3D G3DSA:2.40.50.180 39 153 3.6E-27 T 14-10-2018 AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 Pfam PF00072 Response regulator receiver domain 181 300 1.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 PIRSF PIRSF002867 1 307 3.9E-106 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 SUPERFAMILY SSF52172 177 304 1.71E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 SMART SM00260 17 153 1.0E-20 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 Gene3D G3DSA:3.40.50.2300 165 308 7.2E-26 T 14-10-2018 AMBLS11_04710 dc2efc426aa9056ac121576048d4e13b 309 Pfam PF01584 CheW-like domain 21 155 1.8E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_04775 eddb2fb4925b71066af7c327776b7957 325 SUPERFAMILY SSF82171 68 298 9.42E-5 T 14-10-2018 AMBLS11_04775 eddb2fb4925b71066af7c327776b7957 325 SUPERFAMILY SSF117281 226 300 1.01E-5 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 AMBLS11_04775 eddb2fb4925b71066af7c327776b7957 325 Gene3D G3DSA:2.120.10.10 17 161 9.8E-6 T 14-10-2018 AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 2.7E-45 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 Gene3D G3DSA:3.40.50.1220 189 360 4.6E-61 T 14-10-2018 AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 SUPERFAMILY SSF52518 3 183 1.09E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 Gene3D G3DSA:3.40.50.970 1 178 7.1E-70 T 14-10-2018 AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 SUPERFAMILY SSF52467 189 362 3.27E-63 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 1.0E-56 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 SUPERFAMILY SSF52518 372 565 4.61E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 565 8.1E-259 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 Gene3D G3DSA:3.40.50.970 365 565 1.6E-63 T 14-10-2018 AMBLS11_02260 c8954b34223c62fe13986e0d3e68f31d 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 542 1.2E-47 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMBLS11_03410 8263beff697d19a992c71066b9107bcd 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 95 5.0E-22 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMBLS11_03410 8263beff697d19a992c71066b9107bcd 126 SUPERFAMILY SSF56214 3 124 1.83E-29 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMBLS11_03410 8263beff697d19a992c71066b9107bcd 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 125 6.9E-39 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMBLS11_03410 8263beff697d19a992c71066b9107bcd 126 Gene3D G3DSA:3.90.470.20 2 125 6.5E-37 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMBLS11_03410 8263beff697d19a992c71066b9107bcd 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 120 1.3E-22 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMBLS11_03410 8263beff697d19a992c71066b9107bcd 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 125 22.958 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMBLS11_03410 8263beff697d19a992c71066b9107bcd 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 1.5E-29 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 474 4.9E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 SMART SM00388 251 314 3.4E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 Gene3D G3DSA:1.10.287.130 229 310 1.0E-9 T 14-10-2018 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 SUPERFAMILY SSF55874 313 479 1.7E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 Pfam PF00072 Response regulator receiver domain 492 603 1.4E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 Pfam PF00072 Response regulator receiver domain 622 731 9.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 SMART SM00448 489 603 1.3E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 SMART SM00448 620 731 8.5E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 Gene3D G3DSA:3.40.50.2300 487 612 4.2E-17 T 14-10-2018 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 SUPERFAMILY SSF52172 619 735 5.12E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 SUPERFAMILY SSF47384 251 309 7.46E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 SUPERFAMILY SSF52172 493 607 1.27E-19 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 Gene3D G3DSA:3.40.50.2300 613 735 2.7E-34 T 14-10-2018 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 307 2.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 SMART SM00387 360 475 1.3E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02745 3a0fcb4536379b7dfc8ad21cfa6a9ea5 735 Gene3D G3DSA:3.30.565.10 315 477 3.7E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_04470 f6a3f1a872f91589a765db257daf7301 454 SUPERFAMILY SSF102405 126 328 6.11E-41 T 14-10-2018 AMBLS11_04470 f6a3f1a872f91589a765db257daf7301 454 Pfam PF03641 Possible lysine decarboxylase 188 327 2.5E-32 T 14-10-2018 IPR031100 LOG family AMBLS11_04470 f6a3f1a872f91589a765db257daf7301 454 Pfam PF14793 Domain of unknown function (DUF4478) 5 111 6.6E-43 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AMBLS11_04470 f6a3f1a872f91589a765db257daf7301 454 Pfam PF11892 Domain of unknown function (DUF3412) 332 450 1.3E-56 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AMBLS11_04470 f6a3f1a872f91589a765db257daf7301 454 Gene3D G3DSA:3.30.1850.10 1 114 8.8E-43 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AMBLS11_04470 f6a3f1a872f91589a765db257daf7301 454 Gene3D G3DSA:3.40.50.450 120 450 6.0E-118 T 14-10-2018 AMBLS11_07700 06eaff3861683e71e0da767da78e5f22 139 Gene3D G3DSA:3.10.580.10 1 133 7.2E-28 T 14-10-2018 AMBLS11_07700 06eaff3861683e71e0da767da78e5f22 139 SUPERFAMILY SSF54631 1 127 3.92E-30 T 14-10-2018 AMBLS11_07700 06eaff3861683e71e0da767da78e5f22 139 Pfam PF00571 CBS domain 73 128 1.0E-9 T 14-10-2018 IPR000644 CBS domain AMBLS11_07700 06eaff3861683e71e0da767da78e5f22 139 Pfam PF00571 CBS domain 6 57 6.1E-7 T 14-10-2018 IPR000644 CBS domain AMBLS11_07700 06eaff3861683e71e0da767da78e5f22 139 SMART SM00116 13 61 3.9 T 14-10-2018 IPR000644 CBS domain AMBLS11_07700 06eaff3861683e71e0da767da78e5f22 139 SMART SM00116 80 128 0.03 T 14-10-2018 IPR000644 CBS domain AMBLS11_13965 145e586683371080bbc7b867e9c56fef 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 7.6E-18 T 14-10-2018 IPR003004 GspF/PilC family AMBLS11_13965 145e586683371080bbc7b867e9c56fef 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 7.6E-18 T 14-10-2018 IPR003004 GspF/PilC family AMBLS11_13965 145e586683371080bbc7b867e9c56fef 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 7.6E-18 T 14-10-2018 IPR003004 GspF/PilC family AMBLS11_13965 145e586683371080bbc7b867e9c56fef 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 7.6E-18 T 14-10-2018 IPR003004 GspF/PilC family AMBLS11_13965 145e586683371080bbc7b867e9c56fef 402 Gene3D G3DSA:1.20.81.30 54 170 2.6E-28 T 14-10-2018 AMBLS11_13965 145e586683371080bbc7b867e9c56fef 402 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AMBLS11_13965 145e586683371080bbc7b867e9c56fef 402 Pfam PF00482 Type II secretion system (T2SS), protein F 272 394 1.2E-30 T 14-10-2018 IPR018076 Type II secretion system F domain AMBLS11_13965 145e586683371080bbc7b867e9c56fef 402 Pfam PF00482 Type II secretion system (T2SS), protein F 69 191 1.3E-30 T 14-10-2018 IPR018076 Type II secretion system F domain AMBLS11_13965 145e586683371080bbc7b867e9c56fef 402 Gene3D G3DSA:1.20.81.30 255 364 1.4E-29 T 14-10-2018 AMBLS11_18540 0383bf1d2527adf5beb8a22aad14cbb0 269 Pfam PF12697 Alpha/beta hydrolase family 21 254 1.2E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_18540 0383bf1d2527adf5beb8a22aad14cbb0 269 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 10 261 40.575 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AMBLS11_18540 0383bf1d2527adf5beb8a22aad14cbb0 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 5.5E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_18540 0383bf1d2527adf5beb8a22aad14cbb0 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 5.5E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_18540 0383bf1d2527adf5beb8a22aad14cbb0 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 5.5E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_18540 0383bf1d2527adf5beb8a22aad14cbb0 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 5.5E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_18540 0383bf1d2527adf5beb8a22aad14cbb0 269 Gene3D G3DSA:3.40.50.1820 9 261 2.9E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_18540 0383bf1d2527adf5beb8a22aad14cbb0 269 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 259 2.6E-79 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AMBLS11_18540 0383bf1d2527adf5beb8a22aad14cbb0 269 SUPERFAMILY SSF53474 9 259 2.72E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_10055 0953b82bedf9cd4ab7514dfbb5c8cddc 290 SUPERFAMILY SSF52540 26 256 2.62E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10055 0953b82bedf9cd4ab7514dfbb5c8cddc 290 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 43 158 9.7E-7 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AMBLS11_10055 0953b82bedf9cd4ab7514dfbb5c8cddc 290 Gene3D G3DSA:3.40.50.300 16 289 2.2E-75 T 14-10-2018 AMBLS11_07290 03778f3703b32e25496e7d7d649dd85d 420 Pfam PF00924 Mechanosensitive ion channel 112 311 7.6E-42 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_07290 03778f3703b32e25496e7d7d649dd85d 420 Gene3D G3DSA:3.30.70.100 221 314 1.1E-20 T 14-10-2018 AMBLS11_07290 03778f3703b32e25496e7d7d649dd85d 420 Gene3D G3DSA:2.30.30.60 170 220 4.2E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_07290 03778f3703b32e25496e7d7d649dd85d 420 SUPERFAMILY SSF50182 154 220 6.87E-16 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_07290 03778f3703b32e25496e7d7d649dd85d 420 SUPERFAMILY SSF82689 222 320 2.09E-21 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMBLS11_12705 b9e9295c3fb447b09c1a036f5af88af5 265 Gene3D G3DSA:3.60.21.10 6 240 1.6E-20 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMBLS11_12705 b9e9295c3fb447b09c1a036f5af88af5 265 SUPERFAMILY SSF56300 5 229 1.46E-29 T 14-10-2018 AMBLS11_12705 b9e9295c3fb447b09c1a036f5af88af5 265 Pfam PF00149 Calcineurin-like phosphoesterase 7 207 1.9E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 SMART SM00957 6 402 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 SUPERFAMILY SSF52540 416 618 1.64E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 SUPERFAMILY SSF81767 227 368 1.7E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 SUPERFAMILY SSF52540 5 415 4.25E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 Gene3D G3DSA:1.10.3060.10 621 833 1.8E-80 T 14-10-2018 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.0E-71 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 Gene3D G3DSA:3.40.50.300 22 415 1.3E-176 T 14-10-2018 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 PRINTS PR00906 SecA protein signature 117 127 2.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 PRINTS PR00906 SecA protein signature 413 426 2.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 PRINTS PR00906 SecA protein signature 376 393 2.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 PRINTS PR00906 SecA protein signature 63 87 2.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 PRINTS PR00906 SecA protein signature 101 115 2.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 PRINTS PR00906 SecA protein signature 170 190 2.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 PRINTS PR00906 SecA protein signature 339 361 2.1E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 Pfam PF07517 SecA DEAD-like domain 7 402 3.4E-134 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 SMART SM00958 228 358 1.3E-81 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 Gene3D G3DSA:3.90.1440.10 229 368 1.3E-176 T 14-10-2018 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 Gene3D G3DSA:3.40.50.300 417 620 6.3E-92 T 14-10-2018 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 SUPERFAMILY SSF81886 620 890 7.98E-86 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.8E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 Pfam PF02810 SEC-C motif 882 900 1.8E-10 T 14-10-2018 IPR004027 SEC-C motif AMBLS11_14000 a7bfb81d175598922cd4830a646ce75c 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.066 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMBLS11_14900 3185bf0def9685ec97611179ed3ca71e 427 Pfam PF13416 Bacterial extracellular solute-binding protein 65 336 8.3E-12 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMBLS11_14900 3185bf0def9685ec97611179ed3ca71e 427 Gene3D G3DSA:3.40.190.10 173 335 8.8E-20 T 14-10-2018 AMBLS11_14900 3185bf0def9685ec97611179ed3ca71e 427 SUPERFAMILY SSF53850 40 425 4.69E-45 T 14-10-2018 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 Gene3D G3DSA:1.10.287.130 358 444 1.5E-15 T 14-10-2018 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 Gene3D G3DSA:3.30.565.10 452 600 1.0E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 PIRSF PIRSF036431 5 600 2.3E-176 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 SMART SM00388 381 449 2.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 SUPERFAMILY SSF55874 440 597 3.41E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 SMART SM00387 491 599 2.2E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 544 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 577 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 558 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 596 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 Pfam PF02743 Cache domain 38 285 1.6E-19 T 14-10-2018 IPR033479 Double Cache domain 1 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 SUPERFAMILY SSF103190 74 188 1.14E-21 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 SUPERFAMILY SSF47384 378 450 1.75E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 382 449 2.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 Gene3D G3DSA:3.30.450.20 59 179 8.5E-78 T 14-10-2018 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 Gene3D G3DSA:3.30.450.20 47 285 8.5E-78 T 14-10-2018 AMBLS11_04070 80955f526e78152df3d4b672c10d6465 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 494 598 6.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_09925 c3567aea155109c57f42981a15685dfd 133 Gene3D G3DSA:3.10.450.160 41 133 7.8E-9 T 14-10-2018 AMBLS11_10815 b35446dc0ebf0811cf1b6cc2a6163ade 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMBLS11_10815 b35446dc0ebf0811cf1b6cc2a6163ade 559 SUPERFAMILY SSF56801 15 550 4.84E-113 T 14-10-2018 AMBLS11_10815 b35446dc0ebf0811cf1b6cc2a6163ade 559 Pfam PF00501 AMP-binding enzyme 27 437 1.2E-89 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMBLS11_10815 b35446dc0ebf0811cf1b6cc2a6163ade 559 Gene3D G3DSA:3.30.300.30 438 544 5.6E-7 T 14-10-2018 AMBLS11_10815 b35446dc0ebf0811cf1b6cc2a6163ade 559 Gene3D G3DSA:3.40.50.12780 11 433 5.2E-83 T 14-10-2018 AMBLS11_11790 59ca487de9308369e68318b46b5ae5cb 207 Gene3D G3DSA:1.20.144.10 99 205 1.1E-14 T 14-10-2018 AMBLS11_11790 59ca487de9308369e68318b46b5ae5cb 207 Pfam PF01569 PAP2 superfamily 76 184 3.4E-14 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMBLS11_11790 59ca487de9308369e68318b46b5ae5cb 207 SMART SM00014 71 183 2.3E-8 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMBLS11_11790 59ca487de9308369e68318b46b5ae5cb 207 SUPERFAMILY SSF48317 48 188 4.06E-22 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMBLS11_08255 d0e4f86bd462e91015327ea933503ccc 143 SUPERFAMILY SSF55961 1 143 6.77E-33 T 14-10-2018 AMBLS11_08255 d0e4f86bd462e91015327ea933503ccc 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 8.2E-31 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AMBLS11_08255 d0e4f86bd462e91015327ea933503ccc 143 Gene3D G3DSA:3.30.530.20 3 143 9.7E-38 T 14-10-2018 IPR023393 START-like domain superfamily AMBLS11_03215 1c2fcd525a3b30ad81b42344c232b4a9 340 Pfam PF12849 PBP superfamily domain 56 314 3.3E-29 T 14-10-2018 IPR024370 PBP domain AMBLS11_03215 1c2fcd525a3b30ad81b42344c232b4a9 340 Gene3D G3DSA:3.40.190.10 58 328 1.4E-91 T 14-10-2018 AMBLS11_03215 1c2fcd525a3b30ad81b42344c232b4a9 340 SUPERFAMILY SSF53850 57 336 2.43E-60 T 14-10-2018 AMBLS11_03215 1c2fcd525a3b30ad81b42344c232b4a9 340 Gene3D G3DSA:3.40.190.10 143 285 1.4E-91 T 14-10-2018 AMBLS11_03215 1c2fcd525a3b30ad81b42344c232b4a9 340 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 25 326 2.6E-65 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 AMBLS11_17150 1b2542985577e344f6e2a155150ab334 354 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 7 332 1.3E-92 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AMBLS11_17150 1b2542985577e344f6e2a155150ab334 354 Gene3D G3DSA:3.75.10.10 3 341 2.3E-96 T 14-10-2018 AMBLS11_17150 1b2542985577e344f6e2a155150ab334 354 SUPERFAMILY SSF55909 3 332 1.34E-95 T 14-10-2018 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 PRINTS PR00148 Enolase signature 37 51 2.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 PRINTS PR00148 Enolase signature 165 178 2.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 PRINTS PR00148 Enolase signature 367 384 2.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 PRINTS PR00148 Enolase signature 315 326 2.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 PRINTS PR00148 Enolase signature 338 352 2.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 PRINTS PR00148 Enolase signature 107 123 2.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 Pfam PF03952 Enolase, N-terminal domain 4 134 1.6E-59 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 SUPERFAMILY SSF54826 3 138 8.31E-57 T 14-10-2018 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 ProSitePatterns PS00164 Enolase signature. 338 351 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 Hamap MF_00318 Enolase [eno]. 2 415 44.736 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 SMART SM01193 4 134 1.3E-92 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 428 1.0E-139 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 Gene3D G3DSA:3.30.390.10 1 127 2.2E-57 T 14-10-2018 IPR029017 Enolase-like, N-terminal AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 SUPERFAMILY SSF51604 143 426 1.7E-129 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 PIRSF PIRSF001400 1 429 1.9E-194 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 2.7E-207 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 SMART SM01192 143 429 9.1E-220 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMBLS11_04255 a3d83dc2e7eea09aa6919ba1a0276f8b 430 Gene3D G3DSA:3.20.20.120 128 430 1.0E-136 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMBLS11_00050 02e5f7c5fe8817fec297e4e004e6903a 167 Pfam PF04220 Der GTPase activator (YihI) 24 152 7.1E-37 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 AMBLS11_00050 02e5f7c5fe8817fec297e4e004e6903a 167 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 160 14.631 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 AMBLS11_01590 63f75a44525b661c128b7927a772c76a 752 Pfam PF00593 TonB dependent receptor 272 749 4.9E-22 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_01590 63f75a44525b661c128b7927a772c76a 752 SUPERFAMILY SSF56935 22 751 3.41E-71 T 14-10-2018 AMBLS11_01590 63f75a44525b661c128b7927a772c76a 752 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 153 1.8E-8 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_01590 63f75a44525b661c128b7927a772c76a 752 Gene3D G3DSA:2.40.170.20 178 751 1.5E-51 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_01590 63f75a44525b661c128b7927a772c76a 752 Gene3D G3DSA:2.170.130.10 37 162 3.6E-7 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_00475 f56eb3cce5938cc2637d931d0b512a46 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 41.446 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AMBLS11_00475 f56eb3cce5938cc2637d931d0b512a46 256 SUPERFAMILY SSF110399 1 235 3.27E-79 T 14-10-2018 AMBLS11_00475 f56eb3cce5938cc2637d931d0b512a46 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 1.5E-106 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AMBLS11_00475 f56eb3cce5938cc2637d931d0b512a46 256 Gene3D G3DSA:3.20.20.70 1 254 3.9E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_06135 bf4a8079c095d62b5867731d670807e1 229 TIGRFAM TIGR02796 tolQ: protein TolQ 7 218 1.1E-91 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AMBLS11_06135 bf4a8079c095d62b5867731d670807e1 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 205 2.1E-41 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMBLS11_06135 bf4a8079c095d62b5867731d670807e1 229 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 223 43.7 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AMBLS11_05045 486d9f09c74955c5448759e2a23d89ac 288 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 19 257 3.4E-22 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMBLS11_05045 486d9f09c74955c5448759e2a23d89ac 288 Gene3D G3DSA:3.40.50.300 18 258 1.8E-60 T 14-10-2018 AMBLS11_05045 486d9f09c74955c5448759e2a23d89ac 288 SUPERFAMILY SSF52540 19 278 2.53E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05045 486d9f09c74955c5448759e2a23d89ac 288 PIRSF PIRSF003092 2 282 7.2E-83 T 14-10-2018 IPR025501 ATP binding protein MinD AMBLS11_01355 fcf2685329ba29470617d022c4a53f7b 118 Pfam PF13473 Cupredoxin-like domain 13 117 1.7E-27 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain AMBLS11_01355 fcf2685329ba29470617d022c4a53f7b 118 SUPERFAMILY SSF49503 13 117 8.75E-19 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_01355 fcf2685329ba29470617d022c4a53f7b 118 Gene3D G3DSA:2.60.40.420 23 118 1.4E-23 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_05435 9e9f0fa009d71efe4e415bfef6e94660 994 Pfam PF00593 TonB dependent receptor 481 989 2.1E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_05435 9e9f0fa009d71efe4e415bfef6e94660 994 SUPERFAMILY SSF56935 43 994 9.16E-77 T 14-10-2018 AMBLS11_05435 9e9f0fa009d71efe4e415bfef6e94660 994 Gene3D G3DSA:2.170.130.10 37 173 6.3E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_05435 9e9f0fa009d71efe4e415bfef6e94660 994 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 169 1.2E-20 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_01725 14614456a75302e4f8d8acfca3b950fb 201 SUPERFAMILY SSF52166 10 200 1.09E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_01725 14614456a75302e4f8d8acfca3b950fb 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 1.3E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AMBLS11_01725 14614456a75302e4f8d8acfca3b950fb 201 Gene3D G3DSA:3.40.1370.10 2 201 3.5E-71 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_01725 14614456a75302e4f8d8acfca3b950fb 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.5E-75 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_01725 14614456a75302e4f8d8acfca3b950fb 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.358 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16370 5da2c279bb9307c153edad77f57283ea 144 Gene3D G3DSA:3.100.10.10 69 144 8.3E-14 T 14-10-2018 AMBLS11_16370 5da2c279bb9307c153edad77f57283ea 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.525 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AMBLS11_16370 5da2c279bb9307c153edad77f57283ea 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.3E-29 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P AMBLS11_16370 5da2c279bb9307c153edad77f57283ea 144 SUPERFAMILY SSF52080 4 143 3.79E-44 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AMBLS11_16370 5da2c279bb9307c153edad77f57283ea 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.0E-45 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16830 c5043054d59bc364c6a6d0581ae7f7b7 439 Gene3D G3DSA:3.30.460.10 1 164 6.5E-58 T 14-10-2018 AMBLS11_16830 c5043054d59bc364c6a6d0581ae7f7b7 439 Gene3D G3DSA:1.10.3090.10 167 415 2.3E-93 T 14-10-2018 AMBLS11_16830 c5043054d59bc364c6a6d0581ae7f7b7 439 SUPERFAMILY SSF81301 6 165 3.81E-37 T 14-10-2018 AMBLS11_16830 c5043054d59bc364c6a6d0581ae7f7b7 439 Pfam PF01743 Poly A polymerase head domain 32 167 2.5E-35 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMBLS11_16830 c5043054d59bc364c6a6d0581ae7f7b7 439 Pfam PF12626 Polymerase A arginine-rich C-terminus 312 431 8.0E-39 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AMBLS11_16830 c5043054d59bc364c6a6d0581ae7f7b7 439 SUPERFAMILY SSF81891 169 403 2.09E-48 T 14-10-2018 AMBLS11_16830 c5043054d59bc364c6a6d0581ae7f7b7 439 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 195 257 1.3E-21 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMBLS11_16830 c5043054d59bc364c6a6d0581ae7f7b7 439 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 2 433 6.8E-159 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AMBLS11_16830 c5043054d59bc364c6a6d0581ae7f7b7 439 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 1 433 36.173 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AMBLS11_18160 460415d2ae82affdcc44d68d92c9c65b 271 PIRSF PIRSF031679 1 270 3.8E-94 T 14-10-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted AMBLS11_18160 460415d2ae82affdcc44d68d92c9c65b 271 Gene3D G3DSA:3.40.50.150 26 227 1.3E-16 T 14-10-2018 AMBLS11_18160 460415d2ae82affdcc44d68d92c9c65b 271 SUPERFAMILY SSF53335 39 229 6.64E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_02640 d4c64a0f61b94636a8d0dffd9aaa664a 289 Gene3D G3DSA:2.70.70.10 150 286 1.6E-35 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_02640 d4c64a0f61b94636a8d0dffd9aaa664a 289 Pfam PF01551 Peptidase family M23 188 281 7.4E-28 T 14-10-2018 IPR016047 Peptidase M23 AMBLS11_02640 d4c64a0f61b94636a8d0dffd9aaa664a 289 Pfam PF01476 LysM domain 49 91 1.1E-9 T 14-10-2018 IPR018392 LysM domain AMBLS11_02640 d4c64a0f61b94636a8d0dffd9aaa664a 289 SUPERFAMILY SSF51261 49 285 3.61E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_02640 d4c64a0f61b94636a8d0dffd9aaa664a 289 SMART SM00257 48 92 2.4E-8 T 14-10-2018 IPR018392 LysM domain AMBLS11_02640 d4c64a0f61b94636a8d0dffd9aaa664a 289 Gene3D G3DSA:3.10.350.10 46 90 9.8E-12 T 14-10-2018 IPR036779 LysM domain superfamily AMBLS11_00935 29b370ca30161864107aec52142cbc2e 520 Pfam PF00474 Sodium:solute symporter family 39 438 2.9E-70 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_00935 29b370ca30161864107aec52142cbc2e 520 Gene3D G3DSA:1.20.1730.10 27 520 9.1E-166 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMBLS11_00935 29b370ca30161864107aec52142cbc2e 520 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 437 2.6E-107 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_14070 0d749812bd8f385d6ca1d00cd7103597 591 Pfam PF00905 Penicillin binding protein transpeptidase domain 264 562 8.3E-64 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMBLS11_14070 0d749812bd8f385d6ca1d00cd7103597 591 SUPERFAMILY SSF56519 67 237 2.09E-43 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AMBLS11_14070 0d749812bd8f385d6ca1d00cd7103597 591 Gene3D G3DSA:3.40.710.10 299 485 7.2E-102 T 14-10-2018 AMBLS11_14070 0d749812bd8f385d6ca1d00cd7103597 591 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 23 578 44.631 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMBLS11_14070 0d749812bd8f385d6ca1d00cd7103597 591 Pfam PF03717 Penicillin-binding Protein dimerisation domain 73 222 2.1E-18 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMBLS11_14070 0d749812bd8f385d6ca1d00cd7103597 591 Gene3D G3DSA:3.30.450.330 239 566 7.2E-102 T 14-10-2018 AMBLS11_14070 0d749812bd8f385d6ca1d00cd7103597 591 Gene3D G3DSA:3.90.1310.30 63 237 1.2E-43 T 14-10-2018 AMBLS11_14070 0d749812bd8f385d6ca1d00cd7103597 591 SUPERFAMILY SSF56601 239 574 1.3E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMBLS11_18235 a5f25498b0d0ab5050e145232e045475 521 SUPERFAMILY SSF160246 36 100 2.14E-14 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AMBLS11_18235 a5f25498b0d0ab5050e145232e045475 521 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 36 518 1.4E-220 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AMBLS11_18235 a5f25498b0d0ab5050e145232e045475 521 Gene3D G3DSA:3.30.450.90 114 246 7.0E-54 T 14-10-2018 AMBLS11_18235 a5f25498b0d0ab5050e145232e045475 521 Gene3D G3DSA:3.40.50.300 247 521 1.8E-121 T 14-10-2018 AMBLS11_18235 a5f25498b0d0ab5050e145232e045475 521 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 341 355 - T 14-10-2018 IPR001482 Type II/IV secretion system protein AMBLS11_18235 a5f25498b0d0ab5050e145232e045475 521 Gene3D G3DSA:3.30.300.160 22 113 7.7E-19 T 14-10-2018 AMBLS11_18235 a5f25498b0d0ab5050e145232e045475 521 SUPERFAMILY SSF52540 130 518 5.17E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_18235 a5f25498b0d0ab5050e145232e045475 521 SMART SM00382 274 397 0.0019 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_18235 a5f25498b0d0ab5050e145232e045475 521 Pfam PF00437 Type II/IV secretion system protein 148 413 1.4E-92 T 14-10-2018 IPR001482 Type II/IV secretion system protein AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 718 1264 2.1E-158 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Gene3D G3DSA:2.40.270.10 791 833 7.0E-7 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 592 657 1.2E-21 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1341 3.2E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 514 581 4.1E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Gene3D G3DSA:2.40.50.100 715 789 1.2E-32 T 14-10-2018 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Gene3D G3DSA:3.90.1110.10 307 439 9.0E-36 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.318 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Pfam PF04563 RNA polymerase beta subunit 26 501 7.4E-54 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Gene3D G3DSA:3.90.1100.10 440 628 6.6E-70 T 14-10-2018 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 357 455 3.3E-16 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 152 225 3.8E-7 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 14-10-2018 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1064 1076 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Gene3D G3DSA:2.40.50.150 834 954 1.1E-43 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Gene3D G3DSA:3.90.1100.10 18 173 4.8E-57 T 14-10-2018 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Gene3D G3DSA:3.90.1100.10 647 714 6.1E-21 T 14-10-2018 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 SUPERFAMILY SSF64484 11 1340 0.0 T 14-10-2018 AMBLS11_17030 15729abcd57abb11861dea7a639d11b7 1342 Gene3D G3DSA:2.40.270.10 1036 1242 5.4E-89 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_12960 b86fb4737ea66e2a81a500dfa324813b 298 Gene3D G3DSA:2.40.50.1020 186 298 4.3E-9 T 14-10-2018 AMBLS11_12960 b86fb4737ea66e2a81a500dfa324813b 298 PIRSF PIRSF031767 7 297 6.3E-47 T 14-10-2018 IPR012379 LytTR MHYE transcriptional regulator, putative AMBLS11_12960 b86fb4737ea66e2a81a500dfa324813b 298 Pfam PF04397 LytTr DNA-binding domain 201 294 3.1E-19 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_12960 b86fb4737ea66e2a81a500dfa324813b 298 SMART SM00850 198 295 2.6E-20 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_11180 569525f55dd01fc1cc7400923e694efd 899 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 40 899 4.3E-197 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_11180 569525f55dd01fc1cc7400923e694efd 899 Gene3D G3DSA:2.170.130.10 29 176 1.4E-16 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_11180 569525f55dd01fc1cc7400923e694efd 899 SUPERFAMILY SSF56935 33 898 8.06E-85 T 14-10-2018 AMBLS11_11180 569525f55dd01fc1cc7400923e694efd 899 Gene3D G3DSA:2.40.170.20 291 899 3.4E-39 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_11180 569525f55dd01fc1cc7400923e694efd 899 Pfam PF00593 TonB dependent receptor 429 898 6.3E-34 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_11180 569525f55dd01fc1cc7400923e694efd 899 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 172 6.1E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_04560 732851a2718db0a15d64343858938d62 290 SUPERFAMILY SSF46934 1 55 1.53E-18 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 Pfam PF00889 Elongation factor TS 70 268 1.0E-66 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 SUPERFAMILY SSF54713 147 285 2.35E-53 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 Gene3D G3DSA:1.10.286.20 192 231 1.1E-22 T 14-10-2018 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 Gene3D G3DSA:1.10.8.10 1 55 1.7E-25 T 14-10-2018 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 285 3.5E-112 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 Gene3D G3DSA:3.30.479.20 56 146 7.8E-25 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 Hamap MF_00050 Elongation factor Ts [tsf]. 1 286 80.739 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 SUPERFAMILY SSF54713 55 144 1.63E-19 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMBLS11_04560 732851a2718db0a15d64343858938d62 290 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_10030 76ec5c5e77580dd20171009a52b2627a 820 SUPERFAMILY SSF56645 121 356 1.01E-45 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_10030 76ec5c5e77580dd20171009a52b2627a 820 Pfam PF09317 Domain of unknown function (DUF1974) 515 797 9.5E-113 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AMBLS11_10030 76ec5c5e77580dd20171009a52b2627a 820 Gene3D G3DSA:1.10.540.10 123 236 3.7E-99 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMBLS11_10030 76ec5c5e77580dd20171009a52b2627a 820 Gene3D G3DSA:1.20.140.10 361 506 3.7E-99 T 14-10-2018 AMBLS11_10030 76ec5c5e77580dd20171009a52b2627a 820 SUPERFAMILY SSF47203 361 516 1.03E-23 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_10030 76ec5c5e77580dd20171009a52b2627a 820 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 139 234 4.6E-17 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMBLS11_10030 76ec5c5e77580dd20171009a52b2627a 820 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 507 6.6E-12 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_10030 76ec5c5e77580dd20171009a52b2627a 820 Gene3D G3DSA:2.40.110.10 237 360 3.7E-99 T 14-10-2018 AMBLS11_05095 2ba17c07dea22f61afd0405c26a6f9d6 312 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.4E-134 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 AMBLS11_05095 2ba17c07dea22f61afd0405c26a6f9d6 312 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.4E-132 T 14-10-2018 IPR033752 MetA family AMBLS11_05095 2ba17c07dea22f61afd0405c26a6f9d6 312 Gene3D G3DSA:3.40.50.880 1 301 2.7E-123 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_05095 2ba17c07dea22f61afd0405c26a6f9d6 312 SUPERFAMILY SSF52317 18 297 2.7E-98 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_05095 2ba17c07dea22f61afd0405c26a6f9d6 312 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 5.0E-117 T 14-10-2018 AMBLS11_05095 2ba17c07dea22f61afd0405c26a6f9d6 312 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.472 T 14-10-2018 IPR033752 MetA family AMBLS11_05095 2ba17c07dea22f61afd0405c26a6f9d6 312 PIRSF PIRSF000450 1 309 2.5E-139 T 14-10-2018 IPR033752 MetA family AMBLS11_13145 5bd009f0e206485434b670d45d2c1ebd 178 Gene3D G3DSA:2.160.10.10 1 144 1.9E-35 T 14-10-2018 AMBLS11_13145 5bd009f0e206485434b670d45d2c1ebd 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 78 111 9.6E-11 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_13145 5bd009f0e206485434b670d45d2c1ebd 178 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 45 60 0.15 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_13145 5bd009f0e206485434b670d45d2c1ebd 178 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 86 114 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMBLS11_13145 5bd009f0e206485434b670d45d2c1ebd 178 SUPERFAMILY SSF51161 13 130 3.33E-33 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_15535 a10d9442ab5da8752d132d6dbf7d5c63 375 Pfam PF00487 Fatty acid desaturase 40 260 5.2E-25 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AMBLS11_15535 a10d9442ab5da8752d132d6dbf7d5c63 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 155 173 5.8E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMBLS11_15535 a10d9442ab5da8752d132d6dbf7d5c63 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 96 125 5.8E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMBLS11_15535 a10d9442ab5da8752d132d6dbf7d5c63 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 207 5.8E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMBLS11_15535 a10d9442ab5da8752d132d6dbf7d5c63 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 229 243 5.8E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMBLS11_15535 a10d9442ab5da8752d132d6dbf7d5c63 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 35 57 5.8E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMBLS11_15535 a10d9442ab5da8752d132d6dbf7d5c63 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 58 78 5.8E-35 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AMBLS11_15535 a10d9442ab5da8752d132d6dbf7d5c63 375 PIRSF PIRSF000345 6 332 1.1E-101 T 14-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.3E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.3E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.3E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 1.3E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 1.3E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 Gene3D G3DSA:1.10.10.350 366 468 2.2E-22 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 2.9E-112 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 463 9.8E-190 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 SUPERFAMILY SSF52374 3 297 3.22E-114 T 14-10-2018 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 SUPERFAMILY SSF48163 298 460 3.79E-44 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 460 32.419 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMBLS11_06430 3e26fd9f0fe6603d3e07f22c07a9ab94 469 Gene3D G3DSA:3.40.50.620 1 313 1.3E-136 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_16255 088dd0bc578ca65d86dca6383296430c 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 1.7E-150 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMBLS11_16255 088dd0bc578ca65d86dca6383296430c 294 SUPERFAMILY SSF53448 1 288 1.8E-89 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16255 088dd0bc578ca65d86dca6383296430c 294 Pfam PF00483 Nucleotidyl transferase 4 239 1.3E-69 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMBLS11_16255 088dd0bc578ca65d86dca6383296430c 294 Gene3D G3DSA:3.90.550.10 1 294 3.9E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_10470 a54877b1752f4910742657dd9130015c 259 SUPERFAMILY SSF53474 2 257 1.76E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_10470 a54877b1752f4910742657dd9130015c 259 Pfam PF12697 Alpha/beta hydrolase family 17 249 8.3E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_10470 a54877b1752f4910742657dd9130015c 259 Gene3D G3DSA:3.40.50.1820 3 257 2.7E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Pfam PF07495 Y_Y_Y domain 732 794 2.5E-15 T 14-10-2018 IPR011123 Two component regulator three Y AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1082 1239 1.3E-34 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SMART SM00267 1073 1241 1.5E-55 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SUPERFAMILY SSF63829 336 575 1.11E-9 T 14-10-2018 AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Pfam PF13426 PAS domain 973 1071 6.0E-12 T 14-10-2018 IPR000014 PAS domain AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Gene3D G3DSA:3.30.70.270 1079 1254 3.3E-56 T 14-10-2018 AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Pfam PF08447 PAS fold 874 947 9.7E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Pfam PF07494 Two component regulator propeller 42 65 0.005 T 14-10-2018 IPR011110 Two component regulator propeller AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Gene3D G3DSA:3.30.450.20 831 949 9.1E-18 T 14-10-2018 AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SUPERFAMILY SSF55785 968 1071 7.15E-19 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SUPERFAMILY SSF55073 1089 1243 9.42E-46 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SUPERFAMILY SSF55785 865 957 4.54E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SUPERFAMILY SSF141868 1256 1507 1.05E-85 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SMART SM00086 911 954 100.0 T 14-10-2018 IPR001610 PAC motif AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SMART SM00086 1031 1073 9.7E-6 T 14-10-2018 IPR001610 PAC motif AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Gene3D G3DSA:3.20.20.450 1255 1507 1.0E-95 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SUPERFAMILY SSF63829 44 286 4.25E-12 T 14-10-2018 AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Gene3D G3DSA:2.130.10.10 31 351 5.1E-54 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Gene3D G3DSA:2.130.10.10 460 662 1.4E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 SMART SM00052 1251 1497 1.7E-106 T 14-10-2018 IPR001633 EAL domain AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Gene3D G3DSA:2.60.40.10 673 808 6.1E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 958 1080 5.3E-15 T 14-10-2018 IPR000014 PAS domain AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Pfam PF00563 EAL domain 1259 1492 3.0E-69 T 14-10-2018 IPR001633 EAL domain AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1084 1236 3.1E-42 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05875 3ed6d45d0309a2344d287761eefc6170 1517 Gene3D G3DSA:3.30.450.20 957 1076 4.6E-25 T 14-10-2018 AMBLS11_09165 c6431a02eb1244a75b9d807440444391 335 SMART SM00829 16 332 4.3E-27 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_09165 c6431a02eb1244a75b9d807440444391 335 SUPERFAMILY SSF51735 122 285 3.32E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_09165 c6431a02eb1244a75b9d807440444391 335 Pfam PF13602 Zinc-binding dehydrogenase 195 332 8.3E-20 T 14-10-2018 AMBLS11_09165 c6431a02eb1244a75b9d807440444391 335 SUPERFAMILY SSF50129 4 156 3.8E-35 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_09165 c6431a02eb1244a75b9d807440444391 335 Gene3D G3DSA:3.90.180.10 14 330 1.3E-83 T 14-10-2018 AMBLS11_09165 c6431a02eb1244a75b9d807440444391 335 Gene3D G3DSA:3.40.50.720 131 302 1.3E-83 T 14-10-2018 AMBLS11_09165 c6431a02eb1244a75b9d807440444391 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 99 9.0E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PIRSF PIRSF004557 10 437 1.8E-127 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 425 8.2E-137 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 5.4E-98 T 14-10-2018 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 5.4E-98 T 14-10-2018 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 176 199 5.4E-98 T 14-10-2018 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 5.4E-98 T 14-10-2018 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 5.4E-98 T 14-10-2018 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 150 175 5.4E-98 T 14-10-2018 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 5.4E-98 T 14-10-2018 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 5.4E-98 T 14-10-2018 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 5.4E-98 T 14-10-2018 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 ProSitePatterns PS00756 Protein secY signature 2. 169 186 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 SUPERFAMILY SSF103491 14 420 2.35E-133 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 Pfam PF00344 SecY translocase 74 413 1.3E-116 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 429 29.603 T 14-10-2018 IPR026593 Protein translocase subunit SecY AMBLS11_16365 0a1760514d8f88452848c96db4e9477e 439 Gene3D G3DSA:1.10.3370.10 11 425 4.6E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 375 385 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 PRINTS PR00723 Subtilisin serine protease family (S8) signature 178 197 3.5E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 PRINTS PR00723 Subtilisin serine protease family (S8) signature 219 232 3.5E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 PRINTS PR00723 Subtilisin serine protease family (S8) signature 374 390 3.5E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 Gene3D G3DSA:2.60.120.380 460 555 1.9E-37 T 14-10-2018 AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 Pfam PF00082 Subtilase family 182 425 8.5E-52 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 474 541 2.8E-15 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 SUPERFAMILY SSF52743 158 438 6.94E-84 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 223 233 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 Gene3D G3DSA:3.40.50.200 368 432 5.2E-27 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 Gene3D G3DSA:3.40.50.200 181 367 9.3E-78 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 Gene3D G3DSA:3.30.70.80 59 149 7.3E-15 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMBLS11_16430 7506f0020a78814bb430c6bdbdb0b221 556 SUPERFAMILY SSF54897 64 153 1.93E-8 T 14-10-2018 AMBLS11_00375 80c8437976597a6b1b1a215754e659c8 161 Pfam PF03852 DNA mismatch endonuclease Vsr 2 73 3.8E-32 T 14-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMBLS11_00375 80c8437976597a6b1b1a215754e659c8 161 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 2 117 1.3E-44 T 14-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMBLS11_00375 80c8437976597a6b1b1a215754e659c8 161 SUPERFAMILY SSF52980 3 141 1.02E-52 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMBLS11_00375 80c8437976597a6b1b1a215754e659c8 161 Gene3D G3DSA:3.40.960.10 21 152 1.5E-49 T 14-10-2018 AMBLS11_08905 dcd21603e2c7f5d19ec55bae7a1aafb9 236 Gene3D G3DSA:3.10.20.30 1 104 2.5E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_08905 dcd21603e2c7f5d19ec55bae7a1aafb9 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 109 4.3E-32 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08905 dcd21603e2c7f5d19ec55bae7a1aafb9 236 Gene3D G3DSA:1.10.1060.10 105 236 1.6E-59 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMBLS11_08905 dcd21603e2c7f5d19ec55bae7a1aafb9 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMBLS11_08905 dcd21603e2c7f5d19ec55bae7a1aafb9 236 SUPERFAMILY SSF54292 1 104 2.91E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMBLS11_08905 dcd21603e2c7f5d19ec55bae7a1aafb9 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 7.1E-10 T 14-10-2018 AMBLS11_08905 dcd21603e2c7f5d19ec55bae7a1aafb9 236 SUPERFAMILY SSF46548 105 233 5.93E-41 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMBLS11_08905 dcd21603e2c7f5d19ec55bae7a1aafb9 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 228 9.5E-89 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 Pfam PF13176 Tetratricopeptide repeat 178 204 0.0038 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SUPERFAMILY SSF48452 47 245 7.21E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 Pfam PF14559 Tetratricopeptide repeat 84 141 1.2E-5 T 14-10-2018 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 Gene3D G3DSA:2.60.120.620 414 602 4.4E-21 T 14-10-2018 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 Pfam PF13181 Tetratricopeptide repeat 348 379 0.01 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SUPERFAMILY SSF51197 541 600 8.79E-5 T 14-10-2018 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SUPERFAMILY SSF48452 272 405 3.6E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 Gene3D G3DSA:1.25.40.10 17 257 1.7E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 Pfam PF13759 Putative 2OG-Fe(II) oxygenase 504 596 1.0E-19 T 14-10-2018 IPR012668 Conserved hypothetical protein CHP02466 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00028 74 107 47.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00028 346 379 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00028 108 141 8.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00028 176 209 0.21 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00028 40 73 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00028 210 243 0.057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00386 54 86 27.0 T 14-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00386 257 287 530.0 T 14-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00386 224 256 87.0 T 14-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 SMART SM00386 122 156 320.0 T 14-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 AMBLS11_05310 5e921e07d1c80f149478e7ea18bb8ada 604 Gene3D G3DSA:1.25.40.10 258 413 1.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 SUPERFAMILY SSF50156 251 348 2.5E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 Gene3D G3DSA:2.40.10.10 154 268 4.1E-31 T 14-10-2018 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 Gene3D G3DSA:2.40.10.10 42 150 6.0E-27 T 14-10-2018 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 Pfam PF13365 Trypsin-like peptidase domain 91 223 1.9E-26 T 14-10-2018 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 SUPERFAMILY SSF50494 48 273 1.9E-52 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 SMART SM00228 268 340 2.4E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 Pfam PF13180 PDZ domain 270 348 7.9E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 Gene3D G3DSA:2.30.42.10 269 354 2.8E-19 T 14-10-2018 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 PRINTS PR00834 HtrA/DegQ protease family signature 298 310 8.6E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 8.6E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 PRINTS PR00834 HtrA/DegQ protease family signature 121 141 8.6E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 PRINTS PR00834 HtrA/DegQ protease family signature 194 211 8.6E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 8.6E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03660 c3e8be0bffc5094cb8420b22db7eee30 356 PRINTS PR00834 HtrA/DegQ protease family signature 161 185 8.6E-44 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 Gene3D G3DSA:3.40.50.670 391 624 3.5E-90 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 SMART SM00387 27 173 1.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 Gene3D G3DSA:3.30.230.10 216 390 1.3E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 626 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR00418 DNA topoisomerase II family signature 31 46 4.5E-58 T 14-10-2018 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR00418 DNA topoisomerase II family signature 66 79 4.5E-58 T 14-10-2018 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 4.5E-58 T 14-10-2018 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 4.5E-58 T 14-10-2018 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 4.5E-58 T 14-10-2018 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR00418 DNA topoisomerase II family signature 109 123 4.5E-58 T 14-10-2018 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 4.5E-58 T 14-10-2018 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR00418 DNA topoisomerase II family signature 563 579 4.5E-58 T 14-10-2018 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 4.5E-58 T 14-10-2018 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 SUPERFAMILY SSF55874 4 215 9.32E-67 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 SMART SM00433 34 625 3.2E-209 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.7E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 Pfam PF00204 DNA gyrase B 218 385 6.9E-40 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 Pfam PF01751 Toprim domain 414 523 1.2E-12 T 14-10-2018 IPR006171 TOPRIM domain AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 8.4E-122 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 SUPERFAMILY SSF56719 389 622 3.92E-78 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 559 621 1.0E-24 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 Gene3D G3DSA:3.30.565.10 2 215 8.8E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 SUPERFAMILY SSF54211 217 382 3.22E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_02850 5772677a27147c0fc369184414f696bd 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 629 46.869 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_01245 454e3b579270bc26f7e2cea53869f9f9 130 Gene3D G3DSA:2.60.40.1220 19 117 5.6E-17 T 14-10-2018 AMBLS11_01245 454e3b579270bc26f7e2cea53869f9f9 130 Pfam PF04234 CopC domain 19 111 7.1E-19 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AMBLS11_01245 454e3b579270bc26f7e2cea53869f9f9 130 SUPERFAMILY SSF81296 18 112 5.95E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_16050 31e72e20217a946e812f833c246b4f03 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 8.1E-36 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted AMBLS11_16050 31e72e20217a946e812f833c246b4f03 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 2.7E-34 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted AMBLS11_11580 4d1c4acdf9b94e3fb5ae7eb943da8db8 97 Pfam PF08891 YfcL protein 15 95 1.4E-27 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL AMBLS11_00240 9185043e825fc0d9bdc892b6d4724b16 249 Pfam PF06251 Capsule biosynthesis GfcC 26 245 1.4E-43 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 AMBLS11_00240 9185043e825fc0d9bdc892b6d4724b16 249 Gene3D G3DSA:3.10.560.10 147 220 1.3E-16 T 14-10-2018 AMBLS11_18925 cc375a3b5b17834c81bd3d61625ba487 137 SUPERFAMILY SSF46604 88 137 2.88E-14 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18925 cc375a3b5b17834c81bd3d61625ba487 137 Gene3D G3DSA:2.60.15.10 3 90 2.1E-32 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18925 cc375a3b5b17834c81bd3d61625ba487 137 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 1.0E-30 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18925 cc375a3b5b17834c81bd3d61625ba487 137 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 132 8.6E-10 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AMBLS11_18925 cc375a3b5b17834c81bd3d61625ba487 137 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 132 8.3E-46 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18925 cc375a3b5b17834c81bd3d61625ba487 137 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.371 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18925 cc375a3b5b17834c81bd3d61625ba487 137 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.0E-29 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18925 cc375a3b5b17834c81bd3d61625ba487 137 SUPERFAMILY SSF51344 3 86 2.09E-25 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18925 cc375a3b5b17834c81bd3d61625ba487 137 Gene3D G3DSA:1.20.5.440 91 133 8.2E-15 T 14-10-2018 AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 SUPERFAMILY SSF52540 178 377 1.78E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 SMART SM00490 492 589 8.0E-7 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 TIGRFAM TIGR00595 priA: primosomal protein N' 221 725 5.7E-178 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 SMART SM00487 195 391 1.2E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 Gene3D G3DSA:1.10.8.630 2 112 5.5E-32 T 14-10-2018 AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 Pfam PF00270 DEAD/DEAH box helicase 221 364 6.9E-13 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 Gene3D G3DSA:3.40.50.300 190 379 2.2E-74 T 14-10-2018 AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 Pfam PF00271 Helicase conserved C-terminal domain 506 588 1.2E-5 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 728 23.603 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMBLS11_16695 9da9f1b7b461040fb025b16c11474ef5 729 SUPERFAMILY SSF52540 408 609 8.07E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06815 be073fffb737a1f27b137c59e41ea779 853 Pfam PF00593 TonB dependent receptor 389 852 2.2E-38 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_06815 be073fffb737a1f27b137c59e41ea779 853 SUPERFAMILY SSF56935 41 853 2.38E-99 T 14-10-2018 AMBLS11_06815 be073fffb737a1f27b137c59e41ea779 853 Gene3D G3DSA:2.170.130.10 37 182 3.0E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_06815 be073fffb737a1f27b137c59e41ea779 853 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 178 5.8E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_06815 be073fffb737a1f27b137c59e41ea779 853 Gene3D G3DSA:2.40.170.20 360 853 2.5E-55 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Gene3D G3DSA:3.30.70.870 294 375 2.5E-34 T 14-10-2018 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 SUPERFAMILY SSF50447 173 296 3.53E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Gene3D G3DSA:3.40.50.300 8 193 6.7E-72 T 14-10-2018 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 SUPERFAMILY SSF54980 300 378 3.96E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Pfam PF06421 GTP-binding protein LepA C-terminus 495 601 3.8E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Pfam PF03144 Elongation factor Tu domain 2 213 283 3.3E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 SMART SM00838 406 494 0.0058 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 SUPERFAMILY SSF54980 407 501 3.45E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Pfam PF00009 Elongation factor Tu GTP binding domain 10 189 4.0E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 SUPERFAMILY SSF52540 8 213 5.14E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Gene3D G3DSA:3.30.70.2570 487 561 2.9E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 PRINTS PR00315 GTP-binding elongation factor signature 82 92 4.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 PRINTS PR00315 GTP-binding elongation factor signature 57 65 4.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 PRINTS PR00315 GTP-binding elongation factor signature 98 109 4.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 PRINTS PR00315 GTP-binding elongation factor signature 134 143 4.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Gene3D G3DSA:3.30.70.3380 376 486 1.2E-41 T 14-10-2018 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 TIGRFAM TIGR01393 lepA: elongation factor 4 10 602 2.6E-301 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Gene3D G3DSA:2.40.30.10 194 293 1.8E-35 T 14-10-2018 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 50 65 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Pfam PF00679 Elongation factor G C-terminus 407 491 3.0E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 184 7.4E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_12270 51ac8fda51ea4c4585bf9ab65fbd203a 604 Hamap MF_00071 Elongation factor 4 [lepA]. 1 604 302.725 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 AMBLS11_05555 12d7b147fa9c67e11d99f9dd13e7726f 532 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 11 522 6.2E-188 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMBLS11_05555 12d7b147fa9c67e11d99f9dd13e7726f 532 Pfam PF04262 Glutamate-cysteine ligase 13 385 7.4E-166 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMBLS11_05555 12d7b147fa9c67e11d99f9dd13e7726f 532 SUPERFAMILY SSF55931 11 519 4.12E-190 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMBLS11_05555 12d7b147fa9c67e11d99f9dd13e7726f 532 Gene3D G3DSA:3.30.590.20 22 529 3.5E-186 T 14-10-2018 AMBLS11_05555 12d7b147fa9c67e11d99f9dd13e7726f 532 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 532 203.828 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 Gene3D G3DSA:3.40.1550.10 43 230 1.1E-54 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 8.4E-21 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 8.4E-21 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 8.4E-21 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 8.4E-21 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 7.1E-16 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 PIRSF PIRSF002888 1 328 6.3E-93 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 SUPERFAMILY SSF101801 247 322 7.19E-14 T 14-10-2018 IPR036429 SpoA-like superfamily AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 9.6E-115 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 SUPERFAMILY SSF103039 4 230 5.75E-19 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_04990 a1c052cdd4f4657ea1279260c84fa1c9 352 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.4E-80 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 Gene3D G3DSA:1.25.40.80 166 321 1.2E-18 T 14-10-2018 AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 SUPERFAMILY SSF48173 225 511 4.97E-73 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 Pfam PF03441 FAD binding domain of DNA photolyase 309 505 1.8E-53 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 Pfam PF00875 DNA photolyase 12 132 7.1E-15 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 359 371 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 SUPERFAMILY SSF52425 10 186 1.07E-28 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 PRINTS PR00147 DNA photolyase signature 359 375 3.3E-7 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 PRINTS PR00147 DNA photolyase signature 379 397 3.3E-7 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 Gene3D G3DSA:1.10.579.10 326 527 3.1E-55 T 14-10-2018 AMBLS11_09425 bcdfd6822d825172daf271e00d7e3e0a 543 Gene3D G3DSA:3.40.50.620 7 134 2.6E-20 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_17960 786e2977ca88953ec49a99c3f5916523 978 SUPERFAMILY SSF56935 40 977 8.79E-83 T 14-10-2018 AMBLS11_17960 786e2977ca88953ec49a99c3f5916523 978 Gene3D G3DSA:2.170.130.10 34 169 2.9E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_17960 786e2977ca88953ec49a99c3f5916523 978 Pfam PF00593 TonB dependent receptor 437 976 1.7E-34 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_17960 786e2977ca88953ec49a99c3f5916523 978 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 44 977 1.1E-146 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_17960 786e2977ca88953ec49a99c3f5916523 978 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 153 8.2E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_03825 37ac299b8534c74ed338f88a076e34b6 492 Pfam PF02321 Outer membrane efflux protein 77 278 1.8E-17 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_03825 37ac299b8534c74ed338f88a076e34b6 492 Pfam PF02321 Outer membrane efflux protein 306 487 2.9E-19 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_03825 37ac299b8534c74ed338f88a076e34b6 492 SUPERFAMILY SSF56954 7 491 3.66E-80 T 14-10-2018 AMBLS11_03825 37ac299b8534c74ed338f88a076e34b6 492 Gene3D G3DSA:2.20.200.10 114 378 1.1E-98 T 14-10-2018 AMBLS11_03825 37ac299b8534c74ed338f88a076e34b6 492 Gene3D G3DSA:1.20.1600.10 68 490 1.1E-98 T 14-10-2018 AMBLS11_03825 37ac299b8534c74ed338f88a076e34b6 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 489 1.1E-70 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AMBLS11_12910 3aa003f338d102e5378dd2e7ea49b3fa 253 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 242 7.7E-108 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 AMBLS11_12910 3aa003f338d102e5378dd2e7ea49b3fa 253 SUPERFAMILY SSF52540 2 229 3.79E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12910 3aa003f338d102e5378dd2e7ea49b3fa 253 SMART SM00382 26 229 2.7E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12910 3aa003f338d102e5378dd2e7ea49b3fa 253 Gene3D G3DSA:3.40.50.300 1 247 1.6E-59 T 14-10-2018 AMBLS11_12910 3aa003f338d102e5378dd2e7ea49b3fa 253 Pfam PF00005 ABC transporter 18 172 4.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_11750 6f62a7e10d858f42c446ec8d365a81b4 639 Gene3D G3DSA:3.40.50.300 22 281 9.1E-48 T 14-10-2018 AMBLS11_11750 6f62a7e10d858f42c446ec8d365a81b4 639 Gene3D G3DSA:3.40.50.300 443 637 1.4E-37 T 14-10-2018 AMBLS11_11750 6f62a7e10d858f42c446ec8d365a81b4 639 SMART SM00491 477 606 2.8E-42 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMBLS11_11750 6f62a7e10d858f42c446ec8d365a81b4 639 SMART SM00487 19 323 1.2E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_11750 6f62a7e10d858f42c446ec8d365a81b4 639 SUPERFAMILY SSF52540 18 602 9.35E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_11750 6f62a7e10d858f42c446ec8d365a81b4 639 SMART SM00488 21 270 0.0031 T 14-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 AMBLS11_11750 6f62a7e10d858f42c446ec8d365a81b4 639 Pfam PF13307 Helicase C-terminal domain 461 618 1.2E-33 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMBLS11_11750 6f62a7e10d858f42c446ec8d365a81b4 639 SUPERFAMILY SSF52540 191 594 1.09E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_01950 6d023f00d57c8a81a22f033c77e932fb 345 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.2E-144 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AMBLS11_01950 6d023f00d57c8a81a22f033c77e932fb 345 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 339 6.1E-146 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AMBLS11_01950 6d023f00d57c8a81a22f033c77e932fb 345 Gene3D G3DSA:2.40.40.20 276 342 8.2E-8 T 14-10-2018 AMBLS11_01950 6d023f00d57c8a81a22f033c77e932fb 345 SUPERFAMILY SSF55729 1 340 1.97E-136 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_01950 6d023f00d57c8a81a22f033c77e932fb 345 Gene3D G3DSA:3.40.630.30 2 274 7.8E-119 T 14-10-2018 AMBLS11_01950 6d023f00d57c8a81a22f033c77e932fb 345 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 340 9.1E-142 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AMBLS11_03755 f054b0a26c3822a208165fd063f36a37 164 Pfam PF00929 Exonuclease 9 154 1.7E-6 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_03755 f054b0a26c3822a208165fd063f36a37 164 Gene3D G3DSA:3.30.420.10 7 164 1.9E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_03755 f054b0a26c3822a208165fd063f36a37 164 SUPERFAMILY SSF53098 9 160 1.86E-17 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_03415 50d3241bc01ae5573b2ae7f4d32f0614 486 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 138 483 4.0E-20 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMBLS11_03415 50d3241bc01ae5573b2ae7f4d32f0614 486 Gene3D G3DSA:2.40.50.140 39 125 3.1E-19 T 14-10-2018 AMBLS11_03415 50d3241bc01ae5573b2ae7f4d32f0614 486 SUPERFAMILY SSF53335 114 483 7.08E-65 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_03415 50d3241bc01ae5573b2ae7f4d32f0614 486 Gene3D G3DSA:3.40.1350.30 173 316 3.4E-94 T 14-10-2018 AMBLS11_03415 50d3241bc01ae5573b2ae7f4d32f0614 486 Gene3D G3DSA:3.40.50.150 126 478 3.4E-94 T 14-10-2018 AMBLS11_03415 50d3241bc01ae5573b2ae7f4d32f0614 486 SUPERFAMILY SSF50249 52 104 1.6E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_03415 50d3241bc01ae5573b2ae7f4d32f0614 486 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 63 476 5.8E-90 T 14-10-2018 AMBLS11_03415 50d3241bc01ae5573b2ae7f4d32f0614 486 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 415 445 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site AMBLS11_03415 50d3241bc01ae5573b2ae7f4d32f0614 486 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 57 484 55.669 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Gene3D G3DSA:3.30.1360.40 236 332 2.0E-234 T 14-10-2018 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 SMART SM00434 11 498 1.8E-300 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Gene3D G3DSA:2.120.10.90 534 860 1.8E-125 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 860 24.677 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.4E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 3.9E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 691 707 0.16 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 763 808 6.3E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 813 858 3.4E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 1.3E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 730 756 6.2E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 3.0E-156 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Gene3D G3DSA:1.10.268.10 369 492 2.0E-234 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 Gene3D G3DSA:3.90.199.10 33 520 2.0E-234 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 SUPERFAMILY SSF101904 532 869 9.68E-108 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 859 0.0 T 14-10-2018 AMBLS11_09895 f0830af81e5149443ddf2a70e3ac7770 904 SUPERFAMILY SSF56719 30 520 2.88E-184 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMBLS11_18955 c2cb081d43588912a409c3811c7f2a80 73 SUPERFAMILY SSF81333 2 70 2.62E-18 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AMBLS11_18955 c2cb081d43588912a409c3811c7f2a80 73 PRINTS PR00124 ATP synthase C subunit signature 43 68 3.4E-9 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18955 c2cb081d43588912a409c3811c7f2a80 73 PRINTS PR00124 ATP synthase C subunit signature 5 24 3.4E-9 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18955 c2cb081d43588912a409c3811c7f2a80 73 PRINTS PR00124 ATP synthase C subunit signature 26 41 3.4E-9 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18955 c2cb081d43588912a409c3811c7f2a80 73 Pfam PF00137 ATP synthase subunit C 4 67 1.9E-11 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMBLS11_18955 c2cb081d43588912a409c3811c7f2a80 73 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 14.683 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18955 c2cb081d43588912a409c3811c7f2a80 73 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18955 c2cb081d43588912a409c3811c7f2a80 73 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 14 70 7.7E-31 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMBLS11_18955 c2cb081d43588912a409c3811c7f2a80 73 Gene3D G3DSA:1.20.20.10 1 72 4.4E-29 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 730 7.0E-181 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 Pfam PF14579 Helix-hairpin-helix motif 803 892 2.5E-26 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 SUPERFAMILY SSF89550 5 262 1.16E-15 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 Gene3D G3DSA:3.20.20.140 1 269 9.2E-90 T 14-10-2018 AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 Gene3D G3DSA:2.40.50.140 982 1068 3.6E-6 T 14-10-2018 AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 Gene3D G3DSA:1.10.150.870 774 881 4.5E-5 T 14-10-2018 AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 SMART SM00481 6 73 2.3E-24 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 Pfam PF02811 PHP domain 7 170 1.3E-43 T 14-10-2018 IPR004013 PHP domain GO:0003824 AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 Gene3D G3DSA:1.10.10.1600 432 509 2.9E-34 T 14-10-2018 AMBLS11_04625 41dbcbc41b43953773d2add1c89def09 1154 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1025 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_13030 e88957ea88e45d7be2b7984369e40553 179 SUPERFAMILY SSF144091 10 178 1.57E-24 T 14-10-2018 AMBLS11_13030 e88957ea88e45d7be2b7984369e40553 179 Pfam PF01694 Rhomboid family 48 178 2.4E-20 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMBLS11_13030 e88957ea88e45d7be2b7984369e40553 179 Gene3D G3DSA:1.20.1540.10 7 178 3.2E-13 T 14-10-2018 IPR035952 Rhomboid-like superfamily AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 Gene3D G3DSA:3.30.572.10 1 277 1.7E-127 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 Pfam PF00303 Thymidylate synthase 2 277 5.0E-121 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 SUPERFAMILY SSF55831 1 277 5.89E-126 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.5E-41 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.5E-41 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 PRINTS PR00108 Thymidylate synthase family signature 172 198 2.5E-41 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 PRINTS PR00108 Thymidylate synthase family signature 210 227 2.5E-41 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 277 2.2E-91 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 3.6E-41 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_02730 7b2c3c7867951500581f58008ac24dab 277 Hamap MF_00008 Thymidylate synthase [thyA]. 1 277 41.184 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMBLS11_11165 aa677c3a16ec9bd344de1cb08f7e0368 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 204 8.1E-62 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMBLS11_11165 aa677c3a16ec9bd344de1cb08f7e0368 212 Gene3D G3DSA:3.20.20.70 1 210 3.8E-61 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_11165 aa677c3a16ec9bd344de1cb08f7e0368 212 SUPERFAMILY SSF51569 4 206 1.01E-55 T 14-10-2018 AMBLS11_11165 aa677c3a16ec9bd344de1cb08f7e0368 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMBLS11_11165 aa677c3a16ec9bd344de1cb08f7e0368 212 Pfam PF01081 KDPG and KHG aldolase 7 197 1.2E-58 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMBLS11_09540 55bfa9b8ac425676b556da1332c7a4fb 76 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 3.9E-20 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AMBLS11_09540 55bfa9b8ac425676b556da1332c7a4fb 76 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 5.2E-14 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AMBLS11_05425 86fea0e55599cdc26b303088185b0dcb 357 Gene3D G3DSA:2.40.30.170 216 337 4.8E-21 T 14-10-2018 AMBLS11_05425 86fea0e55599cdc26b303088185b0dcb 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 273 2.7E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_05425 86fea0e55599cdc26b303088185b0dcb 357 Gene3D G3DSA:1.10.287.470 101 202 6.3E-9 T 14-10-2018 AMBLS11_05425 86fea0e55599cdc26b303088185b0dcb 357 SUPERFAMILY SSF111369 179 255 2.35E-7 T 14-10-2018 AMBLS11_05425 86fea0e55599cdc26b303088185b0dcb 357 Gene3D G3DSA:2.40.50.100 46 100 4.0E-11 T 14-10-2018 AMBLS11_05425 86fea0e55599cdc26b303088185b0dcb 357 SUPERFAMILY SSF111369 45 172 1.28E-14 T 14-10-2018 AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 SUPERFAMILY SSF52540 303 530 2.28E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 Gene3D G3DSA:3.40.50.300 1 285 4.6E-84 T 14-10-2018 AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 Gene3D G3DSA:3.40.50.300 286 555 5.3E-76 T 14-10-2018 AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 SMART SM00382 348 521 4.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 SMART SM00382 31 236 6.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 Pfam PF00005 ABC transporter 22 191 9.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 Pfam PF12848 ABC transporter 230 304 2.2E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 SUPERFAMILY SSF52540 12 243 1.43E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 2.3E-294 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 AMBLS11_12215 d7c1bd6d4d2e44146601dedc7466ea39 555 Pfam PF00005 ABC transporter 340 473 1.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 Gene3D G3DSA:2.60.40.2540 1 117 5.8E-32 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01021 OMPA domain signature 160 175 3.4E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01021 OMPA domain signature 175 191 3.4E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 8 26 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 90 109 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 46 63 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 27 45 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 175 192 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 193 212 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 146 172 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 65 87 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 116 143 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 213 233 5.3E-47 T 14-10-2018 AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 Pfam PF00691 OmpA family 129 224 4.1E-21 T 14-10-2018 IPR006665 OmpA-like domain AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 Gene3D G3DSA:3.30.1330.60 118 233 2.4E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_05660 206742307cc1c8af578c530325e3ba3c 233 SUPERFAMILY SSF103088 102 229 9.03E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_15730 aa830af662b10a028894237f7c6f860a 470 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 446 468 0.002 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain AMBLS11_15730 aa830af662b10a028894237f7c6f860a 470 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 32 112 5.7E-14 T 14-10-2018 IPR026588 Choice-of-anchor A domain AMBLS11_15730 aa830af662b10a028894237f7c6f860a 470 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 129 422 1.8E-21 T 14-10-2018 IPR026588 Choice-of-anchor A domain AMBLS11_00115 453c2f4c35f3d45258e46baa3f909748 365 SUPERFAMILY SSF54106 44 91 2.09E-7 T 14-10-2018 AMBLS11_00115 453c2f4c35f3d45258e46baa3f909748 365 Pfam PF01476 LysM domain 45 91 3.7E-12 T 14-10-2018 IPR018392 LysM domain AMBLS11_00115 453c2f4c35f3d45258e46baa3f909748 365 SMART SM00257 44 92 2.1E-5 T 14-10-2018 IPR018392 LysM domain AMBLS11_00115 453c2f4c35f3d45258e46baa3f909748 365 Gene3D G3DSA:3.10.350.10 43 90 1.5E-13 T 14-10-2018 IPR036779 LysM domain superfamily AMBLS11_08650 d8fde880463a1eaf6d1befc4719fb2a1 106 Pfam PF13676 TIR domain 4 77 1.6E-6 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMBLS11_08650 d8fde880463a1eaf6d1befc4719fb2a1 106 Gene3D G3DSA:3.40.50.10140 1 97 1.9E-7 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AMBLS11_14940 18a3012fed04c9f9ef9b7b70f55594bf 691 Gene3D G3DSA:2.40.170.20 174 691 1.4E-44 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_14940 18a3012fed04c9f9ef9b7b70f55594bf 691 Gene3D G3DSA:2.170.130.10 40 166 3.7E-9 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_14940 18a3012fed04c9f9ef9b7b70f55594bf 691 SUPERFAMILY SSF56935 30 691 5.13E-69 T 14-10-2018 AMBLS11_14940 18a3012fed04c9f9ef9b7b70f55594bf 691 Pfam PF00593 TonB dependent receptor 249 690 9.3E-36 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_14940 18a3012fed04c9f9ef9b7b70f55594bf 691 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 163 1.0E-11 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_03075 8c883b44196393de79858b8292c6d2ea 394 SMART SM00922 146 260 1.4E-9 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMBLS11_03075 8c883b44196393de79858b8292c6d2ea 394 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 93 118 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AMBLS11_03075 8c883b44196393de79858b8292c6d2ea 394 SUPERFAMILY SSF51604 106 385 4.9E-74 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMBLS11_03075 8c883b44196393de79858b8292c6d2ea 394 Gene3D G3DSA:3.30.390.10 19 382 5.9E-144 T 14-10-2018 IPR029017 Enolase-like, N-terminal AMBLS11_03075 8c883b44196393de79858b8292c6d2ea 394 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 22 118 3.3E-19 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMBLS11_03075 8c883b44196393de79858b8292c6d2ea 394 SUPERFAMILY SSF54826 1 122 1.06E-30 T 14-10-2018 AMBLS11_03075 8c883b44196393de79858b8292c6d2ea 394 Pfam PF13378 Enolase C-terminal domain-like 150 380 6.1E-49 T 14-10-2018 IPR029065 Enolase C-terminal domain-like AMBLS11_03075 8c883b44196393de79858b8292c6d2ea 394 Gene3D G3DSA:3.20.20.120 111 372 5.9E-144 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMBLS11_07870 a44ef97182b45d502ea636bfff9ce94b 177 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 3.9E-20 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AMBLS11_05635 a3428fe2e9eb753d1df33b05376779b5 351 Gene3D G3DSA:3.55.50.30 273 347 1.5E-8 T 14-10-2018 AMBLS11_05635 a3428fe2e9eb753d1df33b05376779b5 351 Gene3D G3DSA:2.60.120.1440 105 265 1.3E-27 T 14-10-2018 AMBLS11_05635 a3428fe2e9eb753d1df33b05376779b5 351 Pfam PF04773 FecR protein 124 216 1.5E-19 T 14-10-2018 IPR006860 FecR protein AMBLS11_05635 a3428fe2e9eb753d1df33b05376779b5 351 Pfam PF16344 Domain of unknown function (DUF4974) 247 340 1.3E-10 T 14-10-2018 IPR032508 Protein FecR, C-terminal AMBLS11_05635 a3428fe2e9eb753d1df33b05376779b5 351 PIRSF PIRSF018266 5 347 1.2E-71 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.6E-48 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.6E-48 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.6E-48 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.6E-48 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.6E-48 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 SUPERFAMILY SSF51735 3 166 1.77E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 SUPERFAMILY SSF55347 149 312 4.99E-80 T 14-10-2018 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 Gene3D G3DSA:3.30.360.10 149 314 6.0E-158 T 14-10-2018 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 PIRSF PIRSF000149 1 331 3.7E-136 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 Gene3D G3DSA:3.40.50.720 4 326 6.0E-158 T 14-10-2018 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 4.8E-42 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 8.5E-71 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 SMART SM00846 3 150 1.6E-99 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11005 f0a08b3fa3bf40945194ff34129a2f74 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.6E-140 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03280 ce189eb0102d292a20d39d4876145738 522 Pfam PF00501 AMP-binding enzyme 19 431 7.0E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMBLS11_03280 ce189eb0102d292a20d39d4876145738 522 SUPERFAMILY SSF56801 7 521 8.37E-139 T 14-10-2018 AMBLS11_03280 ce189eb0102d292a20d39d4876145738 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 513 2.3E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMBLS11_03280 ce189eb0102d292a20d39d4876145738 522 Gene3D G3DSA:3.40.50.12780 2 427 1.8E-106 T 14-10-2018 AMBLS11_03280 ce189eb0102d292a20d39d4876145738 522 Gene3D G3DSA:3.30.300.310 428 522 2.4E-32 T 14-10-2018 AMBLS11_03280 ce189eb0102d292a20d39d4876145738 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 SUPERFAMILY SSF52021 4 139 2.48E-56 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 Gene3D G3DSA:3.40.50.880 152 375 2.1E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 375 48.679 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 7.9E-53 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 Pfam PF00117 Glutamine amidotransferase class-I 194 369 6.5E-49 T 14-10-2018 IPR017926 Glutamine amidotransferase AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 SMART SM01097 3 133 2.0E-90 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 Gene3D G3DSA:3.50.30.20 2 151 6.7E-60 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 372 5.8E-147 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 261 277 9.5E-41 T 14-10-2018 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 191 205 9.5E-41 T 14-10-2018 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 303 314 9.5E-41 T 14-10-2018 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 295 9.5E-41 T 14-10-2018 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 230 244 9.5E-41 T 14-10-2018 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 233 242 9.7E-11 T 14-10-2018 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 272 9.7E-11 T 14-10-2018 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 346 359 9.7E-11 T 14-10-2018 AMBLS11_06705 bccb539b1795201c8a0d3d8797e1da22 376 SUPERFAMILY SSF52317 154 375 1.35E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_15380 c3722728b59944d442174c8c1c34b3f9 151 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 22 148 7.4E-24 T 14-10-2018 IPR018893 Type VIII secretion system, CsgF AMBLS11_06980 0911da6f3a5c1a9a4f16e964f3c8e6d4 315 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 169 9.0E-59 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMBLS11_06980 0911da6f3a5c1a9a4f16e964f3c8e6d4 315 SUPERFAMILY SSF52540 10 280 3.3E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06980 0911da6f3a5c1a9a4f16e964f3c8e6d4 315 PIRSF PIRSF002849 1 312 1.0E-115 T 14-10-2018 AMBLS11_06980 0911da6f3a5c1a9a4f16e964f3c8e6d4 315 Gene3D G3DSA:1.10.8.300 197 306 1.3E-24 T 14-10-2018 AMBLS11_06980 0911da6f3a5c1a9a4f16e964f3c8e6d4 315 Gene3D G3DSA:3.40.50.300 16 185 1.8E-39 T 14-10-2018 AMBLS11_01680 8e69137267fd231a0c4f299f9aa01f40 255 Pfam PF06439 Domain of Unknown Function (DUF1080) 63 253 9.1E-37 T 14-10-2018 IPR010496 Domain of unknown function DUF1080 AMBLS11_01680 8e69137267fd231a0c4f299f9aa01f40 255 Gene3D G3DSA:2.60.120.560 21 255 1.3E-81 T 14-10-2018 AMBLS11_01780 87ca7aa18596a2f306c9a0d5b022b5e6 605 Pfam PF00999 Sodium/hydrogen exchanger family 9 385 1.3E-34 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMBLS11_01780 87ca7aa18596a2f306c9a0d5b022b5e6 605 Pfam PF02254 TrkA-N domain 400 500 1.4E-7 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMBLS11_01780 87ca7aa18596a2f306c9a0d5b022b5e6 605 Gene3D G3DSA:3.40.50.720 398 516 1.7E-10 T 14-10-2018 AMBLS11_01780 87ca7aa18596a2f306c9a0d5b022b5e6 605 SUPERFAMILY SSF51735 400 502 3.7E-9 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_01780 87ca7aa18596a2f306c9a0d5b022b5e6 605 Gene3D G3DSA:1.20.1530.20 2 394 1.7E-15 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 SUPERFAMILY SSF51445 271 552 1.89E-48 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 PRINTS PR00132 Glycosyl hydrolase family 2 signature 382 397 6.5E-11 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 PRINTS PR00132 Glycosyl hydrolase family 2 signature 317 335 6.5E-11 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 PRINTS PR00132 Glycosyl hydrolase family 2 signature 286 300 6.5E-11 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 PRINTS PR00132 Glycosyl hydrolase family 2 signature 77 92 6.5E-11 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 SUPERFAMILY SSF49785 3 153 1.19E-38 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 SUPERFAMILY SSF49303 169 273 3.17E-18 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 Gene3D G3DSA:2.60.40.10 159 274 1.2E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 Pfam PF00703 Glycosyl hydrolases family 2 171 274 1.9E-18 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 281 409 2.1E-19 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 151 6.3E-21 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 Gene3D G3DSA:2.60.120.260 1 153 3.4E-42 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 Gene3D G3DSA:3.20.20.80 277 557 2.1E-48 T 14-10-2018 AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 Gene3D G3DSA:2.60.40.10 568 651 1.1E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_00960 0a792159c2a72487e4a679aa4a6c23e6 750 Pfam PF16355 Domain of unknown function (DUF4982) 579 645 1.7E-9 T 14-10-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMBLS11_17380 6030fd0837898d79af6d3e6b87a35922 461 Pfam PF00772 DnaB-like helicase N terminal domain 17 118 2.5E-38 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMBLS11_17380 6030fd0837898d79af6d3e6b87a35922 461 SUPERFAMILY SSF48024 15 126 1.01E-39 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AMBLS11_17380 6030fd0837898d79af6d3e6b87a35922 461 Pfam PF03796 DnaB-like helicase C terminal domain 195 451 1.4E-112 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AMBLS11_17380 6030fd0837898d79af6d3e6b87a35922 461 Gene3D G3DSA:3.40.50.300 174 454 4.4E-106 T 14-10-2018 AMBLS11_17380 6030fd0837898d79af6d3e6b87a35922 461 Gene3D G3DSA:1.10.860.10 9 173 2.3E-56 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMBLS11_17380 6030fd0837898d79af6d3e6b87a35922 461 SUPERFAMILY SSF52540 193 444 1.25E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17380 6030fd0837898d79af6d3e6b87a35922 461 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 17 453 8.4E-176 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AMBLS11_17380 6030fd0837898d79af6d3e6b87a35922 461 SMART SM00382 212 418 2.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_07850 220d7021f2c4660e5203fac3b97037b3 1143 SUPERFAMILY SSF50249 40 124 1.61E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_07850 220d7021f2c4660e5203fac3b97037b3 1143 SMART SM00316 37 119 4.2E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_07850 220d7021f2c4660e5203fac3b97037b3 1143 Hamap MF_00970 Ribonuclease E [rne]. 1 1080 35.011 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AMBLS11_07850 220d7021f2c4660e5203fac3b97037b3 1143 Gene3D G3DSA:2.40.50.140 32 125 1.1E-31 T 14-10-2018 AMBLS11_07850 220d7021f2c4660e5203fac3b97037b3 1143 Pfam PF10150 Ribonuclease E/G family 121 390 1.1E-94 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMBLS11_07850 220d7021f2c4660e5203fac3b97037b3 1143 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 2.1E-169 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AMBLS11_07850 220d7021f2c4660e5203fac3b97037b3 1143 Gene3D G3DSA:3.40.1260.20 400 507 3.0E-36 T 14-10-2018 AMBLS11_07850 220d7021f2c4660e5203fac3b97037b3 1143 Pfam PF00575 S1 RNA binding domain 36 118 2.7E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_10620 2d8cc566ca741334de6c6f13b05b595e 228 SMART SM00855 3 171 4.8E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMBLS11_10620 2d8cc566ca741334de6c6f13b05b595e 228 Gene3D G3DSA:3.40.50.1240 1 221 1.5E-29 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMBLS11_10620 2d8cc566ca741334de6c6f13b05b595e 228 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 211 1.5E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMBLS11_10620 2d8cc566ca741334de6c6f13b05b595e 228 SUPERFAMILY SSF53254 1 217 1.96E-34 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 SUPERFAMILY SSF51419 26 283 8.43E-80 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 SUPERFAMILY SSF50621 256 413 2.09E-51 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 Gene3D G3DSA:3.20.20.10 34 276 6.9E-146 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 413 40.712 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 241 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 6.5E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 6.5E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 6.5E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 6.5E-28 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 412 3.1E-159 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 5.0E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 5.0E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 5.0E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 5.0E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 5.0E-27 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 281 2.5E-73 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 Gene3D G3DSA:2.40.37.10 16 409 6.9E-146 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMBLS11_00795 7bdef733b044846b3fe67b85ecafcd61 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 282 370 7.1E-25 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMBLS11_07055 df2371203b8f8f961929764d7886b53e 166 Gene3D G3DSA:2.70.70.10 10 165 1.7E-28 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_07055 df2371203b8f8f961929764d7886b53e 166 SUPERFAMILY SSF51261 13 163 2.79E-29 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_07055 df2371203b8f8f961929764d7886b53e 166 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 20 141 2.2E-27 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AMBLS11_16395 35bd2abf5c8b034883bef610cb0b1ce0 130 SUPERFAMILY SSF56047 2 129 5.1E-45 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16395 35bd2abf5c8b034883bef610cb0b1ce0 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16395 35bd2abf5c8b034883bef610cb0b1ce0 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.542 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16395 35bd2abf5c8b034883bef610cb0b1ce0 130 Pfam PF00410 Ribosomal protein S8 5 129 1.4E-47 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16395 35bd2abf5c8b034883bef610cb0b1ce0 130 Gene3D G3DSA:3.30.1370.30 2 72 2.1E-26 T 14-10-2018 AMBLS11_16395 35bd2abf5c8b034883bef610cb0b1ce0 130 Gene3D G3DSA:3.30.1490.10 73 130 3.6E-23 T 14-10-2018 AMBLS11_06745 63d87eec212022fc589e89a903326138 713 Gene3D G3DSA:3.40.1390.20 223 363 4.7E-19 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AMBLS11_06745 63d87eec212022fc589e89a903326138 713 PIRSF PIRSF006107 1 713 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMBLS11_06745 63d87eec212022fc589e89a903326138 713 SUPERFAMILY SSF52540 1 240 7.43E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06745 63d87eec212022fc589e89a903326138 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 3.0E-125 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMBLS11_06745 63d87eec212022fc589e89a903326138 713 Gene3D G3DSA:3.40.50.10750 529 682 8.5E-132 T 14-10-2018 AMBLS11_06745 63d87eec212022fc589e89a903326138 713 SUPERFAMILY SSF75138 229 353 4.12E-24 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AMBLS11_06745 63d87eec212022fc589e89a903326138 713 Gene3D G3DSA:3.40.50.300 3 204 7.7E-14 T 14-10-2018 AMBLS11_06745 63d87eec212022fc589e89a903326138 713 SUPERFAMILY SSF53659 394 709 4.11E-91 T 14-10-2018 AMBLS11_06745 63d87eec212022fc589e89a903326138 713 Pfam PF13500 AAA domain 3 229 4.6E-32 T 14-10-2018 AMBLS11_06745 63d87eec212022fc589e89a903326138 713 Pfam PF07085 DRTGG domain 233 344 2.5E-28 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMBLS11_06745 63d87eec212022fc589e89a903326138 713 Gene3D G3DSA:3.40.50.10950 397 709 8.5E-132 T 14-10-2018 AMBLS11_06745 63d87eec212022fc589e89a903326138 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 394 706 6.6E-121 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 Gene3D G3DSA:3.40.1190.10 118 358 1.4E-47 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 SUPERFAMILY SSF51984 5 105 8.24E-12 T 14-10-2018 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 Gene3D G3DSA:3.40.50.720 4 104 1.2E-13 T 14-10-2018 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 493 1.8E-115 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 SUPERFAMILY SSF53623 124 354 2.49E-48 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 Pfam PF02875 Mur ligase family, glutamate ligase domain 358 430 4.7E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 Gene3D G3DSA:3.90.190.20 359 491 4.3E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 495 31.882 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 SUPERFAMILY SSF53244 358 495 1.71E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_14050 b94f67a2c9b5746213e76687a488c78b 510 Pfam PF08245 Mur ligase middle domain 129 336 2.4E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMBLS11_06385 73e9e986d9cad8d3c152ed4e7d496971 231 Gene3D G3DSA:3.40.50.2300 1 124 2.2E-32 T 14-10-2018 AMBLS11_06385 73e9e986d9cad8d3c152ed4e7d496971 231 SMART SM00862 149 223 7.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_06385 73e9e986d9cad8d3c152ed4e7d496971 231 Gene3D G3DSA:1.10.10.10 125 226 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_06385 73e9e986d9cad8d3c152ed4e7d496971 231 SMART SM00448 3 113 5.8E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06385 73e9e986d9cad8d3c152ed4e7d496971 231 SUPERFAMILY SSF52172 2 128 1.99E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_06385 73e9e986d9cad8d3c152ed4e7d496971 231 Pfam PF00072 Response regulator receiver domain 5 114 4.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06385 73e9e986d9cad8d3c152ed4e7d496971 231 SUPERFAMILY SSF46894 128 224 1.25E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_06385 73e9e986d9cad8d3c152ed4e7d496971 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 2.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_02880 9c832c1f5c486898ef1ef089e2e847d4 341 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 6.2E-111 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AMBLS11_02880 9c832c1f5c486898ef1ef089e2e847d4 341 Pfam PF13353 4Fe-4S single cluster domain 111 183 2.2E-6 T 14-10-2018 AMBLS11_02880 9c832c1f5c486898ef1ef089e2e847d4 341 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 8.0E-147 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like AMBLS11_02880 9c832c1f5c486898ef1ef089e2e847d4 341 Pfam PF04055 Radical SAM superfamily 118 263 5.5E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_02880 9c832c1f5c486898ef1ef089e2e847d4 341 SUPERFAMILY SSF102114 104 327 3.4E-26 T 14-10-2018 AMBLS11_02880 9c832c1f5c486898ef1ef089e2e847d4 341 PIRSF PIRSF004911 2 340 5.3E-112 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AMBLS11_02880 9c832c1f5c486898ef1ef089e2e847d4 341 Gene3D G3DSA:3.20.20.70 51 334 1.3E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_15150 0b67cb4b5c662947233a04a0f3af0400 707 Gene3D G3DSA:2.170.130.10 36 166 2.9E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_15150 0b67cb4b5c662947233a04a0f3af0400 707 Gene3D G3DSA:2.40.170.20 167 707 2.3E-103 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_15150 0b67cb4b5c662947233a04a0f3af0400 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 707 6.9E-88 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMBLS11_15150 0b67cb4b5c662947233a04a0f3af0400 707 Pfam PF00593 TonB dependent receptor 228 706 7.2E-51 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_15150 0b67cb4b5c662947233a04a0f3af0400 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 155 2.3E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_15150 0b67cb4b5c662947233a04a0f3af0400 707 SUPERFAMILY SSF56935 32 707 6.02E-121 T 14-10-2018 AMBLS11_18565 7931191d2853266bdf29cf8f8a58fe0a 235 Gene3D G3DSA:3.40.50.1860 107 218 3.1E-81 T 14-10-2018 AMBLS11_18565 7931191d2853266bdf29cf8f8a58fe0a 235 SUPERFAMILY SSF53681 121 232 1.64E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMBLS11_18565 7931191d2853266bdf29cf8f8a58fe0a 235 TIGRFAM TIGR00035 asp_race: aspartate racemase 5 233 1.5E-67 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AMBLS11_18565 7931191d2853266bdf29cf8f8a58fe0a 235 Gene3D G3DSA:3.40.50.1860 7 227 3.1E-81 T 14-10-2018 AMBLS11_18565 7931191d2853266bdf29cf8f8a58fe0a 235 SUPERFAMILY SSF53681 5 116 2.84E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMBLS11_18565 7931191d2853266bdf29cf8f8a58fe0a 235 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 227 6.4E-60 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 446 49.66 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 Gene3D G3DSA:3.40.50.10070 22 181 6.0E-46 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 447 9.3E-158 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 Pfam PF07676 WD40-like Beta Propeller Repeat 213 248 2.0E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 Pfam PF07676 WD40-like Beta Propeller Repeat 300 335 3.0E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 5.2E-9 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 Pfam PF07676 WD40-like Beta Propeller Repeat 388 412 0.18 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 SUPERFAMILY SSF52964 28 179 4.18E-39 T 14-10-2018 AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 Pfam PF04052 TolB amino-terminal domain 23 125 2.7E-31 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 SUPERFAMILY SSF69304 173 448 6.54E-60 T 14-10-2018 AMBLS11_06150 2fb2426e25cf04c8a065fc04b268c5ad 451 Gene3D G3DSA:2.120.10.30 183 450 2.8E-95 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 8.9E-198 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 SUPERFAMILY SSF53901 3 252 9.53E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 PIRSF PIRSF000447 1 412 8.5E-195 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 SMART SM00825 Beta-ketoacyl synthase 6 412 1.7E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 3.3E-38 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.4E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 Gene3D G3DSA:3.40.47.10 1 255 1.0E-93 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 SUPERFAMILY SSF53901 215 411 2.88E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07905 00281c9c910e8c4ed42a9bfcf6ce66a7 412 Gene3D G3DSA:3.40.47.10 257 401 2.2E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_15005 519f3c3017caba3c65d824f5d50e9f6b 235 SUPERFAMILY SSF51206 23 134 4.19E-12 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMBLS11_15005 519f3c3017caba3c65d824f5d50e9f6b 235 Gene3D G3DSA:2.60.120.10 3 143 4.7E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_15005 519f3c3017caba3c65d824f5d50e9f6b 235 Gene3D G3DSA:1.10.10.10 144 214 1.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15005 519f3c3017caba3c65d824f5d50e9f6b 235 Pfam PF13545 Crp-like helix-turn-helix domain 146 212 1.6E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMBLS11_15005 519f3c3017caba3c65d824f5d50e9f6b 235 SUPERFAMILY SSF46785 146 218 5.15E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_15005 519f3c3017caba3c65d824f5d50e9f6b 235 SMART SM00419 158 206 7.5E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMBLS11_13370 7ed6135a9c37ffe287f97d4a49c22d91 488 Pfam PF00171 Aldehyde dehydrogenase family 18 477 1.7E-171 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMBLS11_13370 7ed6135a9c37ffe287f97d4a49c22d91 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMBLS11_13370 7ed6135a9c37ffe287f97d4a49c22d91 488 Gene3D G3DSA:3.40.605.10 19 477 1.7E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_13370 7ed6135a9c37ffe287f97d4a49c22d91 488 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 9 475 7.1E-202 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AMBLS11_13370 7ed6135a9c37ffe287f97d4a49c22d91 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMBLS11_13370 7ed6135a9c37ffe287f97d4a49c22d91 488 SUPERFAMILY SSF53720 3 484 1.96E-164 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_13370 7ed6135a9c37ffe287f97d4a49c22d91 488 Gene3D G3DSA:3.40.309.10 255 449 1.7E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMBLS11_00430 bdbd0c5f182a0cd966fef6285d61c66b 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 159 1.2E-11 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_00430 bdbd0c5f182a0cd966fef6285d61c66b 697 SUPERFAMILY SSF56935 23 697 5.92E-112 T 14-10-2018 AMBLS11_00430 bdbd0c5f182a0cd966fef6285d61c66b 697 Pfam PF00593 TonB dependent receptor 236 696 2.1E-34 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_00430 bdbd0c5f182a0cd966fef6285d61c66b 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 697 4.7E-78 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMBLS11_00430 bdbd0c5f182a0cd966fef6285d61c66b 697 Gene3D G3DSA:2.40.170.20 167 697 1.3E-124 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_00430 bdbd0c5f182a0cd966fef6285d61c66b 697 Gene3D G3DSA:2.170.130.10 18 166 1.9E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_00920 f34b878baa9045d0635d793c23edc7f0 339 PIRSF PIRSF005096 1 339 7.4E-110 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AMBLS11_00920 f34b878baa9045d0635d793c23edc7f0 339 Gene3D G3DSA:2.70.98.10 7 339 1.9E-110 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMBLS11_00920 f34b878baa9045d0635d793c23edc7f0 339 SUPERFAMILY SSF74650 5 338 1.07E-102 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMBLS11_00920 f34b878baa9045d0635d793c23edc7f0 339 Pfam PF01263 Aldose 1-epimerase 19 336 7.6E-80 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMBLS11_03390 aad31826e23355e49025ae1057aca0f1 573 Gene3D G3DSA:3.10.310.30 326 455 3.8E-30 T 14-10-2018 AMBLS11_03390 aad31826e23355e49025ae1057aca0f1 573 Pfam PF01368 DHH family 71 204 4.4E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMBLS11_03390 aad31826e23355e49025ae1057aca0f1 573 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 569 5.0E-156 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AMBLS11_03390 aad31826e23355e49025ae1057aca0f1 573 SUPERFAMILY SSF64182 46 456 5.89E-114 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily AMBLS11_03390 aad31826e23355e49025ae1057aca0f1 573 Gene3D G3DSA:3.90.1640.30 45 323 5.4E-87 T 14-10-2018 AMBLS11_03390 aad31826e23355e49025ae1057aca0f1 573 Pfam PF02272 DHHA1 domain 319 447 1.2E-24 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 83 263 3.7E-57 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 Gene3D G3DSA:1.10.155.10 6 81 3.3E-24 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 PIRSF PIRSF000410 1 275 5.0E-93 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 Gene3D G3DSA:3.40.50.150 82 275 1.0E-62 T 14-10-2018 AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 19 66 3.2E-16 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 PRINTS PR00996 Glutamate methyltransferase family signature 76 88 4.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 PRINTS PR00996 Glutamate methyltransferase family signature 234 257 4.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 4.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 PRINTS PR00996 Glutamate methyltransferase family signature 109 129 4.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 PRINTS PR00996 Glutamate methyltransferase family signature 39 52 4.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 PRINTS PR00996 Glutamate methyltransferase family signature 215 229 4.3E-42 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 SMART SM00138 17 275 5.6E-90 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 SUPERFAMILY SSF53335 83 272 2.55E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_01520 fe8782060bfd5cb0de62bd101fc9d64f 276 SUPERFAMILY SSF47757 8 82 1.11E-19 T 14-10-2018 AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 334 2.1E-160 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 Gene3D G3DSA:3.40.50.920 539 670 7.5E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 Gene3D G3DSA:3.40.50.970 4 326 1.5E-131 T 14-10-2018 AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 TIGRFAM TIGR00232 tktlase_bact: transketolase 7 664 5.4E-293 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 SUPERFAMILY SSF52922 534 667 1.13E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 SMART SM00861 355 527 6.2E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 Pfam PF02779 Transketolase, pyrimidine binding domain 354 525 4.4E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 SUPERFAMILY SSF52518 5 320 8.57E-118 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 Pfam PF02780 Transketolase, C-terminal domain 542 657 2.0E-9 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 Gene3D G3DSA:3.40.50.970 327 538 1.1E-76 T 14-10-2018 AMBLS11_18470 4ed05bc259ce6518e41ecccc8b8eec37 671 SUPERFAMILY SSF52518 350 524 1.84E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_03710 dc6d2f762a3448c78916bad55f5f1a6c 1079 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 2 64 5.1E-18 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal AMBLS11_03710 dc6d2f762a3448c78916bad55f5f1a6c 1079 Pfam PF01841 Transglutaminase-like superfamily 127 227 3.3E-16 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_03710 dc6d2f762a3448c78916bad55f5f1a6c 1079 Gene3D G3DSA:3.10.620.30 77 265 1.2E-26 T 14-10-2018 AMBLS11_03710 dc6d2f762a3448c78916bad55f5f1a6c 1079 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 257 1074 0.0 T 14-10-2018 IPR018667 Domain of unknown function DUF2126 AMBLS11_03710 dc6d2f762a3448c78916bad55f5f1a6c 1079 SUPERFAMILY SSF54001 2 318 9.53E-65 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMBLS11_03710 dc6d2f762a3448c78916bad55f5f1a6c 1079 SMART SM00460 153 229 1.9E-19 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_15030 8bdc42f67a0fb5c5720f84e1b7f6a15b 284 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 118 277 1.5E-41 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15030 8bdc42f67a0fb5c5720f84e1b7f6a15b 284 Pfam PF00990 Diguanylate cyclase, GGDEF domain 120 273 1.4E-37 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15030 8bdc42f67a0fb5c5720f84e1b7f6a15b 284 SMART SM00267 109 278 6.2E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15030 8bdc42f67a0fb5c5720f84e1b7f6a15b 284 SUPERFAMILY SSF55073 125 275 5.18E-41 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_15030 8bdc42f67a0fb5c5720f84e1b7f6a15b 284 Gene3D G3DSA:3.30.70.270 116 281 5.5E-48 T 14-10-2018 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.4E-89 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.4E-89 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.4E-89 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.4E-89 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.4E-89 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.4E-89 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.4E-89 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.4E-89 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.8E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.8E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.8E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.8E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.8E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 637 650 3.8E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.8E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 Pfam PF01578 Cytochrome C assembly protein 89 296 1.2E-51 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 647 1.0E-241 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04365 91a31aac498b786c2f15140b27e3ff21 685 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 644 9.1E-124 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 SUPERFAMILY SSF55785 148 270 1.88E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 405 519 1.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 Gene3D G3DSA:1.10.287.130 268 355 1.4E-18 T 14-10-2018 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 Gene3D G3DSA:3.30.450.20 154 267 1.1E-12 T 14-10-2018 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 Gene3D G3DSA:3.30.565.10 357 523 1.6E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 SMART SM00387 405 520 2.7E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 3.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 3.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 3.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 3.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 SMART SM00388 293 358 4.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 Pfam PF00512 His Kinase A (phospho-acceptor) domain 294 356 2.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 SUPERFAMILY SSF55874 347 518 1.07E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 Gene3D G3DSA:3.40.50.2300 525 662 1.3E-33 T 14-10-2018 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 SUPERFAMILY SSF47384 277 355 5.69E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 SMART SM00448 542 656 4.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 Pfam PF00072 Response regulator receiver domain 544 654 5.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_07215 84720b727f44f6daf048b1dc48a814fc 667 SUPERFAMILY SSF52172 541 661 6.69E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_13195 673b8c6cd1df45e2df6c5abc69a65886 522 Pfam PF02706 Chain length determinant protein 11 96 3.1E-6 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AMBLS11_13195 673b8c6cd1df45e2df6c5abc69a65886 522 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 10 511 1.4E-157 T 14-10-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant AMBLS11_16575 4950439e2843810249dac9e6b8b4f5b9 265 Gene3D G3DSA:3.40.50.150 45 265 1.4E-76 T 14-10-2018 AMBLS11_16575 4950439e2843810249dac9e6b8b4f5b9 265 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 172 186 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMBLS11_16575 4950439e2843810249dac9e6b8b4f5b9 265 SUPERFAMILY SSF53335 34 263 3.56E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_16575 4950439e2843810249dac9e6b8b4f5b9 265 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 30 264 39.408 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMBLS11_16575 4950439e2843810249dac9e6b8b4f5b9 265 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 50 65 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMBLS11_16575 4950439e2843810249dac9e6b8b4f5b9 265 Pfam PF01209 ubiE/COQ5 methyltransferase family 34 264 3.0E-102 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMBLS11_16575 4950439e2843810249dac9e6b8b4f5b9 265 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 39 264 2.5E-87 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMBLS11_01695 a72385c9ae0afbb390943e652de44760 248 Gene3D G3DSA:3.40.50.1240 2 248 2.0E-92 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMBLS11_01695 a72385c9ae0afbb390943e652de44760 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 126 3.2E-32 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMBLS11_01695 a72385c9ae0afbb390943e652de44760 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 AMBLS11_01695 a72385c9ae0afbb390943e652de44760 248 PIRSF PIRSF000709 3 112 5.1E-7 T 14-10-2018 AMBLS11_01695 a72385c9ae0afbb390943e652de44760 248 PIRSF PIRSF000709 146 243 0.36 T 14-10-2018 AMBLS11_01695 a72385c9ae0afbb390943e652de44760 248 SUPERFAMILY SSF53254 1 245 5.96E-81 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMBLS11_01695 a72385c9ae0afbb390943e652de44760 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 1.1E-119 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AMBLS11_01695 a72385c9ae0afbb390943e652de44760 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.804 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AMBLS11_01695 a72385c9ae0afbb390943e652de44760 248 SMART SM00855 3 189 3.2E-28 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.0E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 Gene3D G3DSA:1.10.10.10 1 71 4.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.4E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.4E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 SUPERFAMILY SSF48008 92 230 4.18E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 Gene3D G3DSA:1.20.120.530 94 231 2.1E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 SUPERFAMILY SSF46785 4 74 1.12E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 SMART SM00895 96 224 3.1E-18 T 14-10-2018 IPR011711 GntR, C-terminal AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 SMART SM00345 12 71 3.8E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_13935 5c00c8b70b1b11ebe4056fd103aef934 248 Pfam PF07729 FCD domain 96 223 1.3E-20 T 14-10-2018 IPR011711 GntR, C-terminal AMBLS11_16725 542dead5d7e357669b040b9460fab0b8 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 23 289 8.7E-100 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AMBLS11_16725 542dead5d7e357669b040b9460fab0b8 295 Gene3D G3DSA:3.20.20.220 2 295 7.9E-107 T 14-10-2018 AMBLS11_16725 542dead5d7e357669b040b9460fab0b8 295 Pfam PF02219 Methylenetetrahydrofolate reductase 19 290 1.6E-96 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AMBLS11_16725 542dead5d7e357669b040b9460fab0b8 295 SUPERFAMILY SSF51730 21 292 8.44E-93 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like AMBLS11_14975 a8cc71ef1aa6be974aefdc892bb07e4d 123 Gene3D G3DSA:1.10.10.10 4 123 1.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_14975 a8cc71ef1aa6be974aefdc892bb07e4d 123 SUPERFAMILY SSF46785 17 116 3.48E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_14975 a8cc71ef1aa6be974aefdc892bb07e4d 123 Pfam PF01638 HxlR-like helix-turn-helix 31 116 1.8E-23 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 Pfam PF00679 Elongation factor G C-terminus 401 481 6.8E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 SUPERFAMILY SSF52540 5 211 3.76E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 4.3E-292 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 Gene3D G3DSA:2.40.30.10 203 303 1.3E-32 T 14-10-2018 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 SUPERFAMILY SSF54980 306 391 3.6E-14 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 Pfam PF03144 Elongation factor Tu domain 2 223 293 9.4E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 Gene3D G3DSA:3.40.50.300 5 202 1.4E-69 T 14-10-2018 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 Gene3D G3DSA:3.30.70.240 393 486 4.3E-130 T 14-10-2018 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 PRINTS PR00315 GTP-binding elongation factor signature 55 63 2.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 PRINTS PR00315 GTP-binding elongation factor signature 75 85 2.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 PRINTS PR00315 GTP-binding elongation factor signature 127 136 2.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 PRINTS PR00315 GTP-binding elongation factor signature 91 102 2.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 PRINTS PR00315 GTP-binding elongation factor signature 11 24 2.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 1.2E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 4.8E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 Gene3D G3DSA:3.30.70.870 310 594 4.3E-130 T 14-10-2018 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 SUPERFAMILY SSF50447 155 303 7.07E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 SUPERFAMILY SSF54980 402 516 5.76E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 Gene3D G3DSA:2.40.50.250 487 603 4.3E-130 T 14-10-2018 AMBLS11_14830 4a7b38cb9d00dbd19ae9987ede1a5b66 610 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMBLS11_04735 c48209651bbfce3e424da839d8b6440f 461 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMBLS11_04735 c48209651bbfce3e424da839d8b6440f 461 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 443 1.7E-93 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMBLS11_04735 c48209651bbfce3e424da839d8b6440f 461 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 386 460 1.8E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMBLS11_04735 c48209651bbfce3e424da839d8b6440f 461 SUPERFAMILY SSF117143 79 421 3.27E-69 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMBLS11_04735 c48209651bbfce3e424da839d8b6440f 461 Gene3D G3DSA:2.60.98.20 157 341 1.3E-17 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily AMBLS11_04735 c48209651bbfce3e424da839d8b6440f 461 Pfam PF07559 Flagellar basal body protein FlaE 182 341 2.1E-27 T 14-10-2018 IPR011491 Flagellar hook protein FlgE AMBLS11_04735 c48209651bbfce3e424da839d8b6440f 461 Pfam PF00460 Flagella basal body rod protein 3 33 2.6E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMBLS11_07095 b31190005443c07aa84598f9e0e56c3f 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 388 4.0E-17 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07095 b31190005443c07aa84598f9e0e56c3f 644 Gene3D G3DSA:3.20.20.450 400 639 6.7E-50 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07095 b31190005443c07aa84598f9e0e56c3f 644 SMART SM00267 225 394 5.6E-8 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07095 b31190005443c07aa84598f9e0e56c3f 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 389 3.0E-10 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07095 b31190005443c07aa84598f9e0e56c3f 644 SUPERFAMILY SSF55073 241 390 6.51E-16 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07095 b31190005443c07aa84598f9e0e56c3f 644 Pfam PF00563 EAL domain 422 638 1.4E-49 T 14-10-2018 IPR001633 EAL domain AMBLS11_07095 b31190005443c07aa84598f9e0e56c3f 644 SUPERFAMILY SSF141868 409 639 2.09E-49 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07095 b31190005443c07aa84598f9e0e56c3f 644 SMART SM00052 402 643 3.6E-15 T 14-10-2018 IPR001633 EAL domain AMBLS11_07095 b31190005443c07aa84598f9e0e56c3f 644 Gene3D G3DSA:3.30.70.270 220 393 9.6E-25 T 14-10-2018 AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 Gene3D G3DSA:1.10.10.10 1 87 2.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 Gene3D G3DSA:3.40.190.10 170 279 3.3E-58 T 14-10-2018 AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 9.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 Pfam PF03466 LysR substrate binding domain 97 304 2.3E-15 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 SUPERFAMILY SSF46785 2 83 7.35E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 Gene3D G3DSA:3.40.190.10 90 304 3.3E-58 T 14-10-2018 AMBLS11_13060 231f7e774966e18e8d95d1e0b78ff88b 314 SUPERFAMILY SSF53850 90 307 7.06E-37 T 14-10-2018 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 Pfam PF00231 ATP synthase 5 285 3.8E-96 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.7E-110 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 Gene3D G3DSA:3.40.1380.10 61 205 1.1E-109 T 14-10-2018 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.8E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 4.8E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.8E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 4.8E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 Gene3D G3DSA:1.10.287.80 6 282 1.1E-109 T 14-10-2018 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.657 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18935 0d97964ad0e490052a4cb1d9b36b005b 286 SUPERFAMILY SSF52943 2 286 4.81E-97 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_12175 bacea2f42844aedc35607a9cb5212a59 140 Pfam PF01029 NusB family 7 132 3.0E-33 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMBLS11_12175 bacea2f42844aedc35607a9cb5212a59 140 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 133 8.9E-43 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 AMBLS11_12175 bacea2f42844aedc35607a9cb5212a59 140 SUPERFAMILY SSF48013 3 137 1.19E-39 T 14-10-2018 IPR035926 NusB-like superfamily AMBLS11_12175 bacea2f42844aedc35607a9cb5212a59 140 Gene3D G3DSA:1.10.940.10 1 139 4.0E-47 T 14-10-2018 IPR035926 NusB-like superfamily AMBLS11_12175 bacea2f42844aedc35607a9cb5212a59 140 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 22.13 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 PIRSF PIRSF037898 22 1342 2.5E-260 T 14-10-2018 IPR017312 Peptidase S8A, subtilisin-related, Alteromonadales AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 Pfam PF02225 PA domain 459 551 2.3E-11 T 14-10-2018 IPR003137 PA domain AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 SUPERFAMILY SSF52025 456 519 2.62E-9 T 14-10-2018 AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 Pfam PF00082 Subtilase family 212 664 1.4E-48 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 PRINTS PR00723 Subtilisin serine protease family (S8) signature 212 231 2.4E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 PRINTS PR00723 Subtilisin serine protease family (S8) signature 285 298 2.4E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 PRINTS PR00723 Subtilisin serine protease family (S8) signature 628 644 2.4E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 629 639 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 Gene3D G3DSA:2.60.40.10 1233 1316 1.6E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 Gene3D G3DSA:3.50.30.30 424 575 3.9E-101 T 14-10-2018 AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 Pfam PF05922 Peptidase inhibitor I9 113 184 4.8E-7 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 217 228 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 Gene3D G3DSA:3.40.50.200 214 699 3.9E-101 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 1320 1340 6.6E-5 T 14-10-2018 IPR020008 GlyGly-CTERM domain AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 289 299 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMBLS11_09270 5e75496f8dd3c5e8c7694ecc477c3709 1344 SUPERFAMILY SSF52743 119 700 2.49E-66 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_11650 707bb926ddcbc1ebbc07f398a20a2684 402 Pfam PF04286 Protein of unknown function (DUF445) 16 95 1.1E-10 T 14-10-2018 IPR007383 Protein of unknown function DUF445 AMBLS11_17065 bfd652a2f1bb7a415c72a8d888b6ecf8 613 SUPERFAMILY SSF52540 354 605 3.48E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17065 bfd652a2f1bb7a415c72a8d888b6ecf8 613 Pfam PF00005 ABC transporter 382 535 2.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_17065 bfd652a2f1bb7a415c72a8d888b6ecf8 613 Gene3D G3DSA:3.40.50.300 354 606 6.5E-98 T 14-10-2018 AMBLS11_17065 bfd652a2f1bb7a415c72a8d888b6ecf8 613 Gene3D G3DSA:1.20.1560.10 24 334 1.2E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_17065 bfd652a2f1bb7a415c72a8d888b6ecf8 613 SUPERFAMILY SSF90123 30 342 1.57E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_17065 bfd652a2f1bb7a415c72a8d888b6ecf8 613 SMART SM00382 390 581 8.2E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_17065 bfd652a2f1bb7a415c72a8d888b6ecf8 613 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_17065 bfd652a2f1bb7a415c72a8d888b6ecf8 613 Pfam PF00664 ABC transporter transmembrane region 44 308 8.4E-23 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMBLS11_19020 3d1a1c7176e64df8e0ed38b2e2a6a865 82 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 20 72 2.0E-19 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMBLS11_19020 3d1a1c7176e64df8e0ed38b2e2a6a865 82 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 10 81 4.7E-34 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMBLS11_19020 3d1a1c7176e64df8e0ed38b2e2a6a865 82 SMART SM01234 5 72 1.5E-41 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMBLS11_19020 3d1a1c7176e64df8e0ed38b2e2a6a865 82 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 73 24.197 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMBLS11_19020 3d1a1c7176e64df8e0ed38b2e2a6a865 82 Pfam PF01809 Haemolytic domain 10 72 3.0E-30 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 SUPERFAMILY SSF52156 645 774 2.75E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 293 343 2.2E-15 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 7.1E-7 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Pfam PF00009 Elongation factor Tu GTP binding domain 371 528 6.1E-36 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 ProSitePatterns PS01176 Initiation factor 2 signature. 818 840 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Gene3D G3DSA:3.40.50.10050 662 768 8.2E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 59 93 2.0E-10 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 SUPERFAMILY SSF50447 540 622 1.56E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 285 866 7.9E-272 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 SUPERFAMILY SSF46955 3 49 7.69E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 370 525 1.1E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Gene3D G3DSA:3.30.56.50 2 50 4.5E-21 T 14-10-2018 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Gene3D G3DSA:2.40.30.10 539 657 3.9E-40 T 14-10-2018 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 SUPERFAMILY SSF52540 366 533 2.35E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Gene3D G3DSA:2.40.30.10 769 866 1.2E-34 T 14-10-2018 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 865 17.363 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Gene3D G3DSA:3.40.50.300 365 538 4.4E-72 T 14-10-2018 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 Pfam PF11987 Translation-initiation factor 2 652 757 2.4E-36 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AMBLS11_08080 3e1db3e48df19f10badcd5d78a4cb396 867 SUPERFAMILY SSF50447 769 865 8.11E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_11515 5389f37130c2c12e35c4c2b82ac66bfd 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 91 1.4E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AMBLS11_11515 5389f37130c2c12e35c4c2b82ac66bfd 98 Gene3D G3DSA:3.30.2310.20 1 96 2.1E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AMBLS11_11515 5389f37130c2c12e35c4c2b82ac66bfd 98 PIRSF PIRSF029218 1 98 2.6E-30 T 14-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 SUPERFAMILY SSF47240 1 155 2.04E-45 T 14-10-2018 IPR009078 Ferritin-like superfamily AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 PRINTS PR00601 Bacterioferritin signature 129 150 1.4E-47 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 PRINTS PR00601 Bacterioferritin signature 107 127 1.4E-47 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 PRINTS PR00601 Bacterioferritin signature 23 43 1.4E-47 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 PRINTS PR00601 Bacterioferritin signature 44 64 1.4E-47 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 PRINTS PR00601 Bacterioferritin signature 3 22 1.4E-47 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 PRINTS PR00601 Bacterioferritin signature 65 85 1.4E-47 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 PRINTS PR00601 Bacterioferritin signature 86 106 1.4E-47 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 1.2E-48 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 PIRSF PIRSF002560 1 155 8.1E-61 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 Pfam PF00210 Ferritin-like domain 8 145 2.6E-37 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMBLS11_09500 9e368b15d9aa2f4aad2b57b200b56763 155 Gene3D G3DSA:1.20.1260.10 1 155 7.5E-60 T 14-10-2018 IPR012347 Ferritin-like AMBLS11_17835 ac7ed43de4b7c2d0a960edadb41c4036 93 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 90 9.3E-33 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMBLS11_11625 b2b6e8f85695a9fe487e9b965882f098 201 Pfam PF13305 WHG domain 92 178 1.1E-14 T 14-10-2018 IPR025996 WHG domain AMBLS11_11625 b2b6e8f85695a9fe487e9b965882f098 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 2.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_11625 b2b6e8f85695a9fe487e9b965882f098 201 Gene3D G3DSA:1.10.357.10 2 201 9.7E-53 T 14-10-2018 AMBLS11_11625 b2b6e8f85695a9fe487e9b965882f098 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 9.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_11625 b2b6e8f85695a9fe487e9b965882f098 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 9.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_11625 b2b6e8f85695a9fe487e9b965882f098 201 SUPERFAMILY SSF46689 7 77 9.45E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_11625 b2b6e8f85695a9fe487e9b965882f098 201 SUPERFAMILY SSF48498 89 196 1.2E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 SUPERFAMILY SSF55874 629 801 1.1E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 SMART SM00387 687 798 4.6E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 SUPERFAMILY SSF52172 815 935 1.71E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 Pfam PF00072 Response regulator receiver domain 819 929 4.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 Gene3D G3DSA:3.30.450.20 202 355 1.1E-17 T 14-10-2018 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 688 797 1.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 758 776 2.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 737 2.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 751 2.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 782 795 2.5E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 Pfam PF00512 His Kinase A (phospho-acceptor) domain 575 640 9.8E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 Gene3D G3DSA:3.30.565.10 639 803 6.2E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 SUPERFAMILY SSF47384 561 642 3.14E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 Gene3D G3DSA:1.10.287.130 539 638 7.3E-26 T 14-10-2018 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 SMART SM00388 575 640 2.4E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 SMART SM00448 817 931 5.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 Pfam PF02743 Cache domain 207 388 5.5E-15 T 14-10-2018 IPR033479 Double Cache domain 1 AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 SUPERFAMILY SSF103190 230 358 2.12E-5 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMBLS11_02335 100fbb127633246cea32a9508061e1b1 938 Gene3D G3DSA:3.40.50.2300 814 935 3.4E-34 T 14-10-2018 AMBLS11_17190 e1d1f0e3019fe6f2de0f05298744fb22 556 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 224 232 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 AMBLS11_17190 e1d1f0e3019fe6f2de0f05298744fb22 556 Pfam PF04675 DNA ligase N terminus 3 156 6.0E-6 T 14-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 AMBLS11_17190 e1d1f0e3019fe6f2de0f05298744fb22 556 Gene3D G3DSA:2.40.50.140 434 556 1.3E-31 T 14-10-2018 AMBLS11_17190 e1d1f0e3019fe6f2de0f05298744fb22 556 Pfam PF01068 ATP dependent DNA ligase domain 203 429 4.1E-26 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AMBLS11_17190 e1d1f0e3019fe6f2de0f05298744fb22 556 Pfam PF04679 ATP dependent DNA ligase C terminal region 450 539 3.1E-12 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AMBLS11_17190 e1d1f0e3019fe6f2de0f05298744fb22 556 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 554 3.5E-205 T 14-10-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family AMBLS11_17190 e1d1f0e3019fe6f2de0f05298744fb22 556 SUPERFAMILY SSF56091 199 429 3.17E-44 T 14-10-2018 AMBLS11_17190 e1d1f0e3019fe6f2de0f05298744fb22 556 Gene3D G3DSA:3.30.470.30 201 429 3.0E-40 T 14-10-2018 AMBLS11_17190 e1d1f0e3019fe6f2de0f05298744fb22 556 SUPERFAMILY SSF50249 435 555 6.0E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_03060 5778be8ed298d94a7d33546a823baffc 586 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 1.8E-16 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMBLS11_03060 5778be8ed298d94a7d33546a823baffc 586 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 1.7E-8 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMBLS11_03060 5778be8ed298d94a7d33546a823baffc 586 SUPERFAMILY SSF47203 286 467 4.67E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_03060 5778be8ed298d94a7d33546a823baffc 586 Gene3D G3DSA:1.10.540.10 46 159 1.4E-88 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMBLS11_03060 5778be8ed298d94a7d33546a823baffc 586 SUPERFAMILY SSF56645 34 291 6.68E-53 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_03060 5778be8ed298d94a7d33546a823baffc 586 Gene3D G3DSA:2.40.110.10 160 280 1.4E-88 T 14-10-2018 AMBLS11_03060 5778be8ed298d94a7d33546a823baffc 586 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 488 578 2.7E-10 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMBLS11_03060 5778be8ed298d94a7d33546a823baffc 586 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 449 1.8E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_03060 5778be8ed298d94a7d33546a823baffc 586 Gene3D G3DSA:1.20.140.10 281 449 1.4E-88 T 14-10-2018 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 Gene3D G3DSA:3.40.50.2300 157 338 8.6E-51 T 14-10-2018 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 SMART SM00354 4 74 4.3E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 Gene3D G3DSA:1.10.260.40 1 60 1.0E-20 T 14-10-2018 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 1.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 1.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 Gene3D G3DSA:3.40.50.2300 61 153 1.5E-8 T 14-10-2018 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 SUPERFAMILY SSF53822 64 336 9.13E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.6E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 Pfam PF13377 Periplasmic binding protein-like domain 174 334 4.7E-37 T 14-10-2018 AMBLS11_11145 43f964c6837dd7b11c548a7f8c422f07 338 SUPERFAMILY SSF47413 3 62 8.31E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 SUPERFAMILY SSF47384 204 244 3.34E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 Pfam PF01590 GAF domain 23 163 2.1E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 SUPERFAMILY SSF55874 282 448 4.45E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 SMART SM00065 22 174 1.5E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 Gene3D G3DSA:1.10.287.130 185 285 3.4E-19 T 14-10-2018 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 449 5.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 1.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 447 1.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 1.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 1.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 287 3.0E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 SMART SM00387 335 450 7.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 SUPERFAMILY SSF55781 26 164 1.83E-19 T 14-10-2018 AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 Gene3D G3DSA:3.30.450.40 2 184 5.5E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_11275 0d121b302f3dba0de1ba494db64ba732 450 Gene3D G3DSA:3.30.565.10 286 448 9.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14190 905b69157b624ad4bbf1c676a7f91a89 317 Gene3D G3DSA:3.40.50.20 8 115 4.2E-113 T 14-10-2018 AMBLS11_14190 905b69157b624ad4bbf1c676a7f91a89 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 5 121 9.5E-42 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMBLS11_14190 905b69157b624ad4bbf1c676a7f91a89 317 SUPERFAMILY SSF56059 124 313 5.42E-54 T 14-10-2018 AMBLS11_14190 905b69157b624ad4bbf1c676a7f91a89 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 152.625 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMBLS11_14190 905b69157b624ad4bbf1c676a7f91a89 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 5 313 5.0E-125 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMBLS11_14190 905b69157b624ad4bbf1c676a7f91a89 317 Gene3D G3DSA:3.30.1490.20 138 202 4.2E-113 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_14190 905b69157b624ad4bbf1c676a7f91a89 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 2.6E-71 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMBLS11_14190 905b69157b624ad4bbf1c676a7f91a89 317 SUPERFAMILY SSF52440 5 123 6.62E-40 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMBLS11_14190 905b69157b624ad4bbf1c676a7f91a89 317 Gene3D G3DSA:3.30.470.20 116 296 4.2E-113 T 14-10-2018 AMBLS11_02665 33bc232e73c50595c648b775cd7f4c5f 253 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 227 3.7E-78 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMBLS11_02665 33bc232e73c50595c648b775cd7f4c5f 253 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 224 2.7E-71 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMBLS11_02665 33bc232e73c50595c648b775cd7f4c5f 253 SUPERFAMILY SSF53448 6 226 4.83E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_02665 33bc232e73c50595c648b775cd7f4c5f 253 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 5 225 42.524 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMBLS11_02665 33bc232e73c50595c648b775cd7f4c5f 253 Gene3D G3DSA:3.90.550.10 2 233 2.5E-75 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_06280 52dd5bf0a182dc1d9469233a085f0407 550 Pfam PF02470 MlaD protein 46 134 2.5E-12 T 14-10-2018 IPR003399 Mce/MlaD AMBLS11_06280 52dd5bf0a182dc1d9469233a085f0407 550 Pfam PF02470 MlaD protein 293 392 5.2E-11 T 14-10-2018 IPR003399 Mce/MlaD AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 SUPERFAMILY SSF55347 155 310 7.59E-47 T 14-10-2018 AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 147 1.6E-27 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 335 1.8E-111 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 Gene3D G3DSA:3.30.360.10 154 314 2.7E-111 T 14-10-2018 AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 SUPERFAMILY SSF51735 2 183 7.92E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 313 6.2E-9 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 336 36.312 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 150 166 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 SMART SM00859 3 147 2.6E-43 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMBLS11_02110 749d36c56da9a6bf6507be742d4cb32c 337 Gene3D G3DSA:3.40.50.720 6 327 2.7E-111 T 14-10-2018 AMBLS11_13635 b7029ec467dce34bc699ae36fdc73c0b 273 SUPERFAMILY SSF57716 233 271 7.7E-11 T 14-10-2018 AMBLS11_13635 b7029ec467dce34bc699ae36fdc73c0b 273 Gene3D G3DSA:3.20.190.10 2 127 1.1E-23 T 14-10-2018 IPR035937 MutM-like, N-terminal AMBLS11_13635 b7029ec467dce34bc699ae36fdc73c0b 273 SUPERFAMILY SSF81624 2 127 1.96E-19 T 14-10-2018 IPR035937 MutM-like, N-terminal AMBLS11_13635 b7029ec467dce34bc699ae36fdc73c0b 273 SMART SM01232 126 219 4.1E-17 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMBLS11_13635 b7029ec467dce34bc699ae36fdc73c0b 273 Gene3D G3DSA:1.10.8.50 128 272 8.3E-34 T 14-10-2018 AMBLS11_13635 b7029ec467dce34bc699ae36fdc73c0b 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 217 4.1E-14 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMBLS11_13635 b7029ec467dce34bc699ae36fdc73c0b 273 SUPERFAMILY SSF46946 126 217 4.71E-20 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMBLS11_13635 b7029ec467dce34bc699ae36fdc73c0b 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 1.5E-7 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMBLS11_13635 b7029ec467dce34bc699ae36fdc73c0b 273 SMART SM00898 2 110 3.3E-7 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMBLS11_05060 f2f2c8f39870b8b1aba6bbed7427a9a6 251 SUPERFAMILY SSF75708 43 250 3.4E-64 T 14-10-2018 AMBLS11_05060 f2f2c8f39870b8b1aba6bbed7427a9a6 251 Pfam PF04344 Chemotaxis phosphatase, CheZ 43 251 5.6E-76 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AMBLS11_05060 f2f2c8f39870b8b1aba6bbed7427a9a6 251 PIRSF PIRSF002884 20 251 1.5E-80 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AMBLS11_05060 f2f2c8f39870b8b1aba6bbed7427a9a6 251 Gene3D G3DSA:1.10.287.500 62 196 2.1E-43 T 14-10-2018 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 SUPERFAMILY SSF56003 323 747 7.79E-110 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 SMART SM01008 211 300 3.4E-17 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 PIRSF PIRSF036389 1 753 7.1E-229 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 Gene3D G3DSA:3.90.1170.50 181 297 1.3E-8 T 14-10-2018 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 8 25 4.9E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 Gene3D G3DSA:3.30.365.10 47 179 1.5E-20 T 14-10-2018 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 SUPERFAMILY SSF56003 23 244 5.58E-34 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 320 602 3.2E-30 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 46 190 2.4E-14 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 619 701 1.5E-14 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 Gene3D G3DSA:3.30.365.10 605 751 1.6E-36 T 14-10-2018 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 Gene3D G3DSA:3.30.365.10 352 443 4.3E-47 T 14-10-2018 AMBLS11_08305 89e3407c7b9b3da926d8c9d56b53c4a6 753 Gene3D G3DSA:3.30.365.10 328 548 4.3E-47 T 14-10-2018 AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 SMART SM00387 585 694 2.7E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 6 692 8.5E-164 T 14-10-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 Gene3D G3DSA:3.30.565.10 545 692 8.1E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 SUPERFAMILY SSF55874 580 693 1.44E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 Gene3D G3DSA:1.10.287.130 488 544 8.1E-33 T 14-10-2018 AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 587 692 1.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 638 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 692 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 673 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14160 1448e6f6f7c02920628129580589a674 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 653 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 7.0E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.396 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 Pfam PF01165 Ribosomal protein S21 4 56 1.3E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 Gene3D G3DSA:1.20.5.1150 16 54 1.3E-20 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.3E-24 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_03135 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02120 4d7d7e1ffb7d00bbea623aa8979f4539 293 Pfam PF07813 LTXXQ motif family protein 42 126 3.8E-6 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AMBLS11_02120 4d7d7e1ffb7d00bbea623aa8979f4539 293 Pfam PF07813 LTXXQ motif family protein 182 279 3.1E-9 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AMBLS11_02120 4d7d7e1ffb7d00bbea623aa8979f4539 293 Gene3D G3DSA:1.20.120.1490 183 292 6.3E-20 T 14-10-2018 AMBLS11_02120 4d7d7e1ffb7d00bbea623aa8979f4539 293 Gene3D G3DSA:1.20.120.1490 27 135 7.0E-14 T 14-10-2018 AMBLS11_05180 1c57f0e3d670112b69557e70ff3996c9 111 Gene3D G3DSA:3.10.129.10 1 110 9.5E-31 T 14-10-2018 AMBLS11_05180 1c57f0e3d670112b69557e70ff3996c9 111 SUPERFAMILY SSF54637 1 104 9.92E-28 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_05180 1c57f0e3d670112b69557e70ff3996c9 111 Pfam PF03061 Thioesterase superfamily 1 66 6.8E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 Gene3D G3DSA:3.30.390.30 344 465 1.0E-45 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 2.6E-71 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 2.6E-71 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.6E-71 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.6E-71 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 2.6E-71 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 2.6E-71 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.6E-71 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 2.6E-71 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.6E-71 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 SUPERFAMILY SSF55424 341 463 1.34E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PIRSF PIRSF000350 1 466 1.1E-88 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 Gene3D G3DSA:3.50.50.60 149 269 1.1E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 Gene3D G3DSA:3.50.50.60 8 330 1.1E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 454 6.0E-152 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 452 4.4E-38 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 4.9E-62 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 2.0E-39 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 2.0E-39 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.0E-39 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.0E-39 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.0E-39 T 14-10-2018 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMBLS11_13920 06348d9ee9dd7313718e3333a78d8926 473 SUPERFAMILY SSF51905 7 379 2.13E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_02890 114fff321f35273a18ae494656c605bd 357 Pfam PF00152 tRNA synthetases class II (D, K and N) 30 353 6.9E-38 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_02890 114fff321f35273a18ae494656c605bd 357 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 50 352 4.2E-124 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AMBLS11_02890 114fff321f35273a18ae494656c605bd 357 SUPERFAMILY SSF55681 29 352 6.17E-76 T 14-10-2018 AMBLS11_02890 114fff321f35273a18ae494656c605bd 357 Gene3D G3DSA:3.30.930.10 33 357 1.2E-102 T 14-10-2018 AMBLS11_01020 e92194aeb9ee144835bce29d7d63a19b 488 Gene3D G3DSA:2.40.50.140 30 127 8.7E-31 T 14-10-2018 AMBLS11_01020 e92194aeb9ee144835bce29d7d63a19b 488 Pfam PF00575 S1 RNA binding domain 38 109 9.3E-5 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_01020 e92194aeb9ee144835bce29d7d63a19b 488 SUPERFAMILY SSF50249 39 127 8.0E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_01020 e92194aeb9ee144835bce29d7d63a19b 488 SMART SM00316 37 122 1.5E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_01020 e92194aeb9ee144835bce29d7d63a19b 488 Pfam PF10150 Ribonuclease E/G family 124 392 7.3E-101 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMBLS11_01020 e92194aeb9ee144835bce29d7d63a19b 488 Gene3D G3DSA:3.40.1260.20 402 487 1.7E-6 T 14-10-2018 AMBLS11_01020 e92194aeb9ee144835bce29d7d63a19b 488 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 425 1.8E-163 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AMBLS11_12025 3940b43cffe01d780233c139ccc8dd3c 1183 Gene3D G3DSA:1.25.40.10 713 1022 1.8E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12025 3940b43cffe01d780233c139ccc8dd3c 1183 SUPERFAMILY SSF52540 204 434 1.69E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12025 3940b43cffe01d780233c139ccc8dd3c 1183 SMART SM00862 89 165 2.5E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_12025 3940b43cffe01d780233c139ccc8dd3c 1183 Gene3D G3DSA:1.10.10.10 62 170 1.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_12025 3940b43cffe01d780233c139ccc8dd3c 1183 SUPERFAMILY SSF48452 808 950 2.78E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12025 3940b43cffe01d780233c139ccc8dd3c 1183 SUPERFAMILY SSF46894 71 166 4.82E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_12025 3940b43cffe01d780233c139ccc8dd3c 1183 Gene3D G3DSA:3.40.50.300 205 399 1.9E-5 T 14-10-2018 AMBLS11_12025 3940b43cffe01d780233c139ccc8dd3c 1183 Pfam PF00486 Transcriptional regulatory protein, C terminal 94 165 2.5E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 8.9E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 Gene3D G3DSA:3.30.70.920 56 140 4.3E-25 T 14-10-2018 AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 Gene3D G3DSA:1.10.10.10 4 55 5.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 SUPERFAMILY SSF46785 2 61 2.62E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 SMART SM00344 3 112 4.1E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 SUPERFAMILY SSF54909 63 152 4.16E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 1.3E-18 T 14-10-2018 AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 4.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 4.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMBLS11_05265 e6ff07250e398075e48e07f780196548 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 4.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMBLS11_14185 3ddd593d49f61e4844d0363b952d610f 242 Gene3D G3DSA:2.40.240.20 1 68 3.3E-22 T 14-10-2018 AMBLS11_14185 3ddd593d49f61e4844d0363b952d610f 242 SUPERFAMILY SSF75217 75 242 5.23E-53 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMBLS11_14185 3ddd593d49f61e4844d0363b952d610f 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 241 1.2E-70 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMBLS11_14185 3ddd593d49f61e4844d0363b952d610f 242 PIRSF PIRSF015601 2 241 1.5E-61 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMBLS11_14185 3ddd593d49f61e4844d0363b952d610f 242 Gene3D G3DSA:3.40.1280.10 74 242 1.8E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMBLS11_14185 3ddd593d49f61e4844d0363b952d610f 242 SUPERFAMILY SSF88697 2 68 1.47E-15 T 14-10-2018 IPR015947 PUA-like superfamily AMBLS11_14185 3ddd593d49f61e4844d0363b952d610f 242 Pfam PF04452 RNA methyltransferase 19 237 1.9E-74 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMBLS11_01205 4250c0a73af748609baac52dba434428 227 SMART SM00862 145 220 1.4E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_01205 4250c0a73af748609baac52dba434428 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 5.9E-102 T 14-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AMBLS11_01205 4250c0a73af748609baac52dba434428 227 Pfam PF00072 Response regulator receiver domain 3 113 3.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01205 4250c0a73af748609baac52dba434428 227 Gene3D G3DSA:3.40.50.2300 1 121 3.9E-36 T 14-10-2018 AMBLS11_01205 4250c0a73af748609baac52dba434428 227 Gene3D G3DSA:1.10.10.10 122 227 4.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_01205 4250c0a73af748609baac52dba434428 227 SUPERFAMILY SSF46894 118 221 5.39E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_01205 4250c0a73af748609baac52dba434428 227 SUPERFAMILY SSF52172 1 118 1.29E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_01205 4250c0a73af748609baac52dba434428 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 1.0E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_01205 4250c0a73af748609baac52dba434428 227 SMART SM00448 1 112 9.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14245 c3301665a31859a05130e3eb8e878dc6 386 Pfam PF13374 Tetratricopeptide repeat 234 258 0.01 T 14-10-2018 AMBLS11_14245 c3301665a31859a05130e3eb8e878dc6 386 Pfam PF13181 Tetratricopeptide repeat 305 329 0.16 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14245 c3301665a31859a05130e3eb8e878dc6 386 Pfam PF13181 Tetratricopeptide repeat 337 366 0.14 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14245 c3301665a31859a05130e3eb8e878dc6 386 Gene3D G3DSA:1.25.40.10 187 382 3.6E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_14245 c3301665a31859a05130e3eb8e878dc6 386 SMART SM00028 336 369 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14245 c3301665a31859a05130e3eb8e878dc6 386 SMART SM00028 234 267 62.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14245 c3301665a31859a05130e3eb8e878dc6 386 SMART SM00028 302 335 0.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14245 c3301665a31859a05130e3eb8e878dc6 386 SUPERFAMILY SSF48452 203 365 7.59E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_10085 834e0712e9fb8f25d807cc37b60a77c4 457 Pfam PF01554 MatE 19 178 2.1E-30 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_10085 834e0712e9fb8f25d807cc37b60a77c4 457 Pfam PF01554 MatE 245 406 6.0E-33 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_10085 834e0712e9fb8f25d807cc37b60a77c4 457 PIRSF PIRSF006603 3 455 3.9E-61 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_10085 834e0712e9fb8f25d807cc37b60a77c4 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 424 9.3E-96 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_01860 08f5b42bbe00eca42c63e28a54ab469f 239 Pfam PF12833 Helix-turn-helix domain 160 238 7.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_01860 08f5b42bbe00eca42c63e28a54ab469f 239 SMART SM00342 154 237 5.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_01860 08f5b42bbe00eca42c63e28a54ab469f 239 SUPERFAMILY SSF46689 190 238 5.82E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_01860 08f5b42bbe00eca42c63e28a54ab469f 239 Gene3D G3DSA:1.10.10.60 135 239 8.8E-24 T 14-10-2018 AMBLS11_01860 08f5b42bbe00eca42c63e28a54ab469f 239 SUPERFAMILY SSF51182 20 74 3.38E-5 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_01860 08f5b42bbe00eca42c63e28a54ab469f 239 SUPERFAMILY SSF46689 137 188 2.28E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_01860 08f5b42bbe00eca42c63e28a54ab469f 239 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 191 233 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMBLS11_13040 bb38ceebb1aa659815e70e76ec23a188 302 Pfam PF04960 Glutaminase 19 302 5.3E-111 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AMBLS11_13040 bb38ceebb1aa659815e70e76ec23a188 302 Gene3D G3DSA:3.40.710.10 1 302 5.2E-109 T 14-10-2018 AMBLS11_13040 bb38ceebb1aa659815e70e76ec23a188 302 TIGRFAM TIGR03814 Gln_ase: glutaminase A 5 302 2.9E-125 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AMBLS11_13040 bb38ceebb1aa659815e70e76ec23a188 302 Hamap MF_00313 Glutaminase [glsA]. 1 302 44.995 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AMBLS11_13040 bb38ceebb1aa659815e70e76ec23a188 302 SUPERFAMILY SSF56601 3 302 1.33E-108 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 Gene3D G3DSA:3.30.565.10 325 508 1.2E-56 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 SUPERFAMILY SSF47384 263 325 3.81E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 Pfam PF01584 CheW-like domain 514 640 5.3E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 SMART SM01231 261 324 3.7E-18 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 Gene3D G3DSA:1.20.120.160 1 145 5.3E-42 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 SUPERFAMILY SSF50341 508 638 2.49E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 508 3.8E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 Gene3D G3DSA:2.30.30.40 509 635 3.4E-39 T 14-10-2018 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 Gene3D G3DSA:2.40.50.180 532 595 3.4E-39 T 14-10-2018 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 SUPERFAMILY SSF47226 6 126 2.71E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 SMART SM00073 5 102 2.5E-29 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 SMART SM00387 369 509 6.5E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 SUPERFAMILY SSF55874 327 507 1.05E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 Gene3D G3DSA:1.10.287.560 261 324 2.5E-15 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 Pfam PF01627 Hpt domain 10 99 5.4E-21 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 SMART SM00260 501 640 1.7E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 8.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 8.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 463 8.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 8.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01545 ec14bc7ea3c6a954547761d824e77708 653 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 263 324 8.5E-16 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMBLS11_09900 7c744248aee4cf48ebfb01a32bfb68cf 234 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 227 2.8E-85 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AMBLS11_09900 7c744248aee4cf48ebfb01a32bfb68cf 234 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 8 233 37.173 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AMBLS11_09900 7c744248aee4cf48ebfb01a32bfb68cf 234 Gene3D G3DSA:3.40.50.150 8 232 1.2E-74 T 14-10-2018 AMBLS11_09900 7c744248aee4cf48ebfb01a32bfb68cf 234 SUPERFAMILY SSF53335 10 213 2.07E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_09900 7c744248aee4cf48ebfb01a32bfb68cf 234 Pfam PF13489 Methyltransferase domain 50 198 5.3E-23 T 14-10-2018 AMBLS11_18290 9cac134537700fd9d0c66f1903d523ce 353 SUPERFAMILY SSF56281 74 347 1.62E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_18290 9cac134537700fd9d0c66f1903d523ce 353 SMART SM00849 89 312 1.5E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_18290 9cac134537700fd9d0c66f1903d523ce 353 Pfam PF12706 Beta-lactamase superfamily domain 102 313 4.5E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_18290 9cac134537700fd9d0c66f1903d523ce 353 Gene3D G3DSA:3.60.15.10 73 352 2.1E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_02150 40e6284a66baa45fd67e359d13ca3570 656 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_02150 40e6284a66baa45fd67e359d13ca3570 656 Pfam PF12704 MacB-like periplasmic core domain 282 499 1.2E-39 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMBLS11_02150 40e6284a66baa45fd67e359d13ca3570 656 Pfam PF02687 FtsX-like permease family 562 649 4.5E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMBLS11_02150 40e6284a66baa45fd67e359d13ca3570 656 SMART SM00382 32 219 1.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_02150 40e6284a66baa45fd67e359d13ca3570 656 SUPERFAMILY SSF52540 3 225 6.01E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02150 40e6284a66baa45fd67e359d13ca3570 656 Pfam PF00005 ABC transporter 23 171 5.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_02150 40e6284a66baa45fd67e359d13ca3570 656 Gene3D G3DSA:3.40.50.300 1 264 7.8E-67 T 14-10-2018 AMBLS11_06465 7eadd9b467c29140ff9439f0dc201f16 232 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_06465 7eadd9b467c29140ff9439f0dc201f16 232 Gene3D G3DSA:3.40.50.300 1 231 2.7E-68 T 14-10-2018 AMBLS11_06465 7eadd9b467c29140ff9439f0dc201f16 232 SUPERFAMILY SSF52540 1 223 4.24E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06465 7eadd9b467c29140ff9439f0dc201f16 232 Pfam PF00005 ABC transporter 21 167 1.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_06465 7eadd9b467c29140ff9439f0dc201f16 232 SMART SM00382 30 216 1.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 465 2.0E-199 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 459 5.9E-84 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 SUPERFAMILY SSF55681 95 463 1.68E-98 T 14-10-2018 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 Gene3D G3DSA:3.30.930.10 103 464 1.3E-110 T 14-10-2018 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 465 45.678 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.8E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 219 6.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 223 236 6.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 380 396 6.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 420 434 6.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 Gene3D G3DSA:2.40.50.140 1 102 1.4E-20 T 14-10-2018 AMBLS11_06295 dfcb28a4f00e8626b57fd927329d7d4f 465 SUPERFAMILY SSF50249 15 101 7.07E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_09125 fe9971c90e6118d191446beaf39e1f04 282 Pfam PF06580 Histidine kinase 85 164 1.5E-25 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMBLS11_09125 fe9971c90e6118d191446beaf39e1f04 282 SMART SM00387 179 279 3.7E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_09125 fe9971c90e6118d191446beaf39e1f04 282 Gene3D G3DSA:3.30.565.10 140 278 1.1E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_09125 fe9971c90e6118d191446beaf39e1f04 282 SUPERFAMILY SSF55874 140 276 3.01E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SUPERFAMILY SSF51126 79 385 8.63E-5 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SUPERFAMILY SSF51126 542 900 3.06E-5 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 251 273 570.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 1254 1276 10000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 331 354 470.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 678 700 640.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 758 781 390.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 782 806 9300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 1117 1139 5100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 1197 1220 600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 360 379 4000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_03225 bdd043c9f68fa938ff86350f87309725 1356 SMART SM00710 1221 1245 2000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_02080 5ddc2eb62bbbedf49e0945a74b549c32 745 SUPERFAMILY SSF55073 332 471 4.63E-9 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_02080 5ddc2eb62bbbedf49e0945a74b549c32 745 Pfam PF00563 EAL domain 500 731 4.7E-58 T 14-10-2018 IPR001633 EAL domain AMBLS11_02080 5ddc2eb62bbbedf49e0945a74b549c32 745 Gene3D G3DSA:3.20.20.450 490 744 3.0E-67 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_02080 5ddc2eb62bbbedf49e0945a74b549c32 745 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 426 7.3E-7 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_02080 5ddc2eb62bbbedf49e0945a74b549c32 745 SUPERFAMILY SSF141868 499 739 1.57E-63 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_02080 5ddc2eb62bbbedf49e0945a74b549c32 745 SMART SM00052 491 736 3.2E-63 T 14-10-2018 IPR001633 EAL domain AMBLS11_02080 5ddc2eb62bbbedf49e0945a74b549c32 745 Gene3D G3DSA:3.30.70.270 319 474 5.5E-10 T 14-10-2018 AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 SMART SM01008 34 141 1.5E-34 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 Gene3D G3DSA:3.30.365.10 142 774 2.0E-265 T 14-10-2018 AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 Gene3D G3DSA:3.30.365.10 462 610 2.0E-265 T 14-10-2018 AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 SUPERFAMILY SSF56003 143 776 3.93E-184 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 Gene3D G3DSA:3.30.365.10 191 285 2.0E-265 T 14-10-2018 AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 34 138 2.4E-20 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 SUPERFAMILY SSF54665 10 140 2.36E-32 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 165 708 7.0E-189 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 Gene3D G3DSA:3.90.1170.50 20 141 2.0E-265 T 14-10-2018 AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 Gene3D G3DSA:3.30.365.10 155 410 2.0E-265 T 14-10-2018 AMBLS11_07165 f805266e064abfd1a83420796c51a55f 788 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 20 779 0.0 T 14-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 AMBLS11_06730 9a729a586f843f26c4a29d4d60cd8a35 130 SUPERFAMILY SSF159238 1 126 3.53E-35 T 14-10-2018 IPR023159 SO1590-like superfamily AMBLS11_06730 9a729a586f843f26c4a29d4d60cd8a35 130 Pfam PF11528 Protein of unknown function (DUF3224) 4 125 7.1E-32 T 14-10-2018 IPR021607 Protein of unknown function DUF3224 AMBLS11_06730 9a729a586f843f26c4a29d4d60cd8a35 130 Gene3D G3DSA:2.40.350.10 1 129 3.5E-38 T 14-10-2018 IPR023159 SO1590-like superfamily AMBLS11_00470 a55ac6ddfbe722938d13bae80e251a2c 377 SUPERFAMILY SSF102114 35 336 1.15E-49 T 14-10-2018 AMBLS11_00470 a55ac6ddfbe722938d13bae80e251a2c 377 SMART SM00876 256 365 1.5E-27 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMBLS11_00470 a55ac6ddfbe722938d13bae80e251a2c 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 257 364 2.9E-22 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMBLS11_00470 a55ac6ddfbe722938d13bae80e251a2c 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 4 371 2.3E-153 T 14-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AMBLS11_00470 a55ac6ddfbe722938d13bae80e251a2c 377 Gene3D G3DSA:3.20.20.70 9 369 1.2E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_00470 a55ac6ddfbe722938d13bae80e251a2c 377 Pfam PF04055 Radical SAM superfamily 81 227 3.0E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 Gene3D G3DSA:1.10.8.410 394 443 1.2E-13 T 14-10-2018 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 Gene3D G3DSA:1.20.58.1830 18 29 3.8E-44 T 14-10-2018 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 Gene3D G3DSA:1.20.1330.10 242 393 2.9E-5 T 14-10-2018 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 Pfam PF00700 Bacterial flagellin C-terminal helical region 358 442 2.0E-12 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 PRINTS PR00207 Flagellin signature 33 50 2.8E-14 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 PRINTS PR00207 Flagellin signature 107 130 2.8E-14 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 PRINTS PR00207 Flagellin signature 72 91 2.8E-14 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 Gene3D G3DSA:1.20.1330.10 41 136 3.8E-44 T 14-10-2018 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 Pfam PF00669 Bacterial flagellin N-terminal helical region 18 127 2.4E-27 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_16325 7adac31a372c5454fd285fc762e22a31 446 SUPERFAMILY SSF64518 17 442 6.41E-59 T 14-10-2018 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 Gene3D G3DSA:1.10.287.610 103 150 2.0E-94 T 14-10-2018 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 SUPERFAMILY SSF52313 6 231 1.7E-97 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.6E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.6E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.6E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.6E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.6E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.6E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.7E-108 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 42.171 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 Gene3D G3DSA:3.40.50.10490 8 219 2.0E-94 T 14-10-2018 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMBLS11_04555 15b55b650216e5f71449c9ca3856b700 243 Pfam PF00318 Ribosomal protein S2 9 224 3.4E-96 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_12140 d67016adc4a1806529edf09cf6c27337 309 Pfam PF00691 OmpA family 188 287 1.0E-14 T 14-10-2018 IPR006665 OmpA-like domain AMBLS11_12140 d67016adc4a1806529edf09cf6c27337 309 Gene3D G3DSA:3.30.1330.60 146 295 5.2E-43 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_12140 d67016adc4a1806529edf09cf6c27337 309 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 1.7E-18 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain AMBLS11_12140 d67016adc4a1806529edf09cf6c27337 309 SUPERFAMILY SSF103088 175 293 7.19E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_14820 129b92bedf9e0088574e47f3b055b319 391 Gene3D G3DSA:3.40.640.10 66 303 3.1E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_14820 129b92bedf9e0088574e47f3b055b319 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 390 1.1E-103 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AMBLS11_14820 129b92bedf9e0088574e47f3b055b319 391 Gene3D G3DSA:3.90.1150.10 13 389 3.1E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_14820 129b92bedf9e0088574e47f3b055b319 391 SUPERFAMILY SSF53383 5 390 9.55E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_14820 129b92bedf9e0088574e47f3b055b319 391 Pfam PF00155 Aminotransferase class I and II 48 389 4.1E-35 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_01875 a5ef8ba57728c98687bb4e486c7050be 415 Gene3D G3DSA:1.10.3430.10 4 414 2.0E-118 T 14-10-2018 IPR029020 Ammonium/urea transporter AMBLS11_01875 a5ef8ba57728c98687bb4e486c7050be 415 Pfam PF00909 Ammonium Transporter Family 16 407 1.2E-96 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMBLS11_01875 a5ef8ba57728c98687bb4e486c7050be 415 SUPERFAMILY SSF111352 10 388 6.15E-100 T 14-10-2018 AMBLS11_01875 a5ef8ba57728c98687bb4e486c7050be 415 ProSitePatterns PS01219 Ammonium transporters signature. 168 193 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AMBLS11_01875 a5ef8ba57728c98687bb4e486c7050be 415 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 9 410 2.4E-200 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype AMBLS11_18255 995486955f0c1fa890c69979c74271eb 142 TIGRFAM TIGR01707 gspI: type II secretion system protein I 23 120 3.9E-26 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AMBLS11_18255 995486955f0c1fa890c69979c74271eb 142 Pfam PF02501 Type II secretion system (T2SS), protein I 58 135 8.4E-28 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AMBLS11_18255 995486955f0c1fa890c69979c74271eb 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 22 42 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18255 995486955f0c1fa890c69979c74271eb 142 Gene3D G3DSA:3.30.1300.30 50 136 8.8E-27 T 14-10-2018 AMBLS11_18255 995486955f0c1fa890c69979c74271eb 142 SUPERFAMILY SSF54523 55 136 5.1E-25 T 14-10-2018 AMBLS11_18255 995486955f0c1fa890c69979c74271eb 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 43 9.0E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18255 995486955f0c1fa890c69979c74271eb 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 43 3.5E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 Gene3D G3DSA:2.130.10.10 25 125 2.6E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 Pfam PF07494 Two component regulator propeller 44 66 2.2E-4 T 14-10-2018 IPR011110 Two component regulator propeller AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 Pfam PF07494 Two component regulator propeller 286 309 0.0099 T 14-10-2018 IPR011110 Two component regulator propeller AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 SUPERFAMILY SSF63829 254 483 5.45E-11 T 14-10-2018 AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 Pfam PF07495 Y_Y_Y domain 677 731 5.3E-12 T 14-10-2018 IPR011123 Two component regulator three Y AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 Gene3D G3DSA:3.30.70.270 794 960 5.7E-54 T 14-10-2018 AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 Pfam PF00990 Diguanylate cyclase, GGDEF domain 800 956 1.1E-41 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 SUPERFAMILY SSF55073 805 960 2.98E-45 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 SMART SM00267 789 960 2.5E-53 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 Gene3D G3DSA:2.130.10.10 359 626 6.5E-36 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 Gene3D G3DSA:2.130.10.10 129 358 1.5E-37 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 Gene3D G3DSA:2.60.40.10 627 745 2.2E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_05480 64f66e64dc63619b1eea3ca9e9e0fa62 961 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 797 959 3.5E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 PIRSF PIRSF000148 4 338 2.4E-134 T 14-10-2018 AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 Gene3D G3DSA:3.40.50.720 7 331 1.8E-145 T 14-10-2018 AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 335 6.7E-134 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 SMART SM00859 6 121 1.1E-41 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 SUPERFAMILY SSF55347 131 321 5.66E-76 T 14-10-2018 AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 4.0E-61 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 Gene3D G3DSA:3.30.360.10 130 317 1.8E-145 T 14-10-2018 AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 SUPERFAMILY SSF51735 5 159 2.73E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 36.904 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_11495 3c116973a603a7fe3c059cb9bfc26bc0 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 119 1.6E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMBLS11_18570 20951518384d7de5699ca1ba782435b6 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 119 2.3E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMBLS11_18570 20951518384d7de5699ca1ba782435b6 127 SUPERFAMILY SSF54593 2 123 6.2E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_18570 20951518384d7de5699ca1ba782435b6 127 Gene3D G3DSA:3.10.180.10 1 125 5.2E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_07020 dd85db5a1604ac25cbd418d4f7dc4467 108 SUPERFAMILY SSF117782 1 106 1.96E-38 T 14-10-2018 IPR035439 UPF0145 domain superfamily AMBLS11_07020 dd85db5a1604ac25cbd418d4f7dc4467 108 Pfam PF01906 Putative heavy-metal-binding 1 104 1.9E-40 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 AMBLS11_07020 dd85db5a1604ac25cbd418d4f7dc4467 108 Gene3D G3DSA:3.30.110.70 2 106 4.7E-43 T 14-10-2018 AMBLS11_07020 dd85db5a1604ac25cbd418d4f7dc4467 108 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.324 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 AMBLS11_11425 8bb2f8a7c4a1558920374914f88f6ab5 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 3.3E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_11425 8bb2f8a7c4a1558920374914f88f6ab5 337 Gene3D G3DSA:3.90.180.10 22 334 2.4E-97 T 14-10-2018 AMBLS11_11425 8bb2f8a7c4a1558920374914f88f6ab5 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AMBLS11_11425 8bb2f8a7c4a1558920374914f88f6ab5 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 8.1E-21 T 14-10-2018 AMBLS11_11425 8bb2f8a7c4a1558920374914f88f6ab5 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 1.5E-156 T 14-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AMBLS11_11425 8bb2f8a7c4a1558920374914f88f6ab5 337 Gene3D G3DSA:3.40.50.720 128 273 2.4E-97 T 14-10-2018 AMBLS11_11425 8bb2f8a7c4a1558920374914f88f6ab5 337 SMART SM00829 5 334 7.8E-10 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_11425 8bb2f8a7c4a1558920374914f88f6ab5 337 SUPERFAMILY SSF51735 117 285 9.41E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11425 8bb2f8a7c4a1558920374914f88f6ab5 337 SUPERFAMILY SSF50129 12 144 1.51E-32 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 Gene3D G3DSA:2.40.30.10 338 393 1.2E-29 T 14-10-2018 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 Gene3D G3DSA:3.40.50.300 1 203 5.9E-70 T 14-10-2018 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 4.8E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 151 9.6E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.5E-234 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.7E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 SUPERFAMILY SSF52540 6 219 4.64E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 SUPERFAMILY SSF50465 298 393 8.06E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.667 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 SUPERFAMILY SSF50447 205 301 3.14E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.9E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMBLS11_16165 9115797c7751926e6328b5c8da691ef5 394 Gene3D G3DSA:2.40.30.10 206 334 2.6E-53 T 14-10-2018 AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 SUPERFAMILY SSF54999 5 101 5.89E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 SMART SM01403 7 101 3.8E-57 T 14-10-2018 IPR027486 Ribosomal protein S10 domain AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 Gene3D G3DSA:3.30.70.600 1 103 5.6E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.2E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 9.5E-47 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.185 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 8.3E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 8.3E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01715 606e6d2095dfb9e5b5cda28463815b76 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 8.3E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 556 3.2E-108 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 1.1E-256 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 5.6E-17 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 Pfam PF02938 GAD domain 307 406 7.9E-31 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 582 33.457 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 5.2E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 516 530 5.2E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 5.2E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 472 488 5.2E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 Gene3D G3DSA:3.30.930.10 116 579 1.1E-194 T 14-10-2018 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 Gene3D G3DSA:2.40.50.140 1 106 9.0E-34 T 14-10-2018 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 SUPERFAMILY SSF50249 1 105 9.14E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 SUPERFAMILY SSF55261 288 419 5.23E-48 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 Gene3D G3DSA:3.30.1360.30 271 420 1.1E-194 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AMBLS11_06105 30fa3afa1e5daa5728b6249ae9704927 586 SUPERFAMILY SSF55681 108 580 1.7E-104 T 14-10-2018 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 Gene3D G3DSA:3.50.50.60 147 242 9.2E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 Gene3D G3DSA:3.50.50.60 248 399 1.0E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 SUPERFAMILY SSF51971 145 400 1.29E-66 T 14-10-2018 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 SUPERFAMILY SSF46548 6 157 3.87E-41 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 Gene3D G3DSA:1.10.1060.10 12 146 6.3E-34 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 134 2.0E-37 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 6.2E-246 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 458 9.1E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.9E-34 T 14-10-2018 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 1.9E-34 T 14-10-2018 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 PRINTS PR00419 Adrenodoxin reductase family signature 323 336 1.9E-34 T 14-10-2018 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.9E-34 T 14-10-2018 AMBLS11_14620 3afa46c726bbc92ac9d0e7d84a27b15f 471 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.9E-34 T 14-10-2018 AMBLS11_00455 67b7cf1f3028a3e98a64aeff7d58c5c8 461 Pfam PF04317 YcjX-like family, DUF463 33 458 4.1E-78 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AMBLS11_12220 859b14777e4bcbb4458d6c56dca8fac7 135 Pfam PF07238 PilZ domain 4 109 1.2E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 AMBLS11_12220 859b14777e4bcbb4458d6c56dca8fac7 135 SUPERFAMILY SSF141371 1 128 1.92E-19 T 14-10-2018 AMBLS11_12220 859b14777e4bcbb4458d6c56dca8fac7 135 Gene3D G3DSA:2.40.10.220 1 131 7.2E-28 T 14-10-2018 AMBLS11_07820 d58630f5c5fe5775df9c1b0f3acc94d8 302 Pfam PF03466 LysR substrate binding domain 88 289 1.4E-28 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_07820 d58630f5c5fe5775df9c1b0f3acc94d8 302 SUPERFAMILY SSF53850 89 289 9.18E-30 T 14-10-2018 AMBLS11_07820 d58630f5c5fe5775df9c1b0f3acc94d8 302 SUPERFAMILY SSF46785 1 85 2.63E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_07820 d58630f5c5fe5775df9c1b0f3acc94d8 302 Gene3D G3DSA:1.10.10.10 1 84 1.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_07820 d58630f5c5fe5775df9c1b0f3acc94d8 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_07820 d58630f5c5fe5775df9c1b0f3acc94d8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_07820 d58630f5c5fe5775df9c1b0f3acc94d8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_07820 d58630f5c5fe5775df9c1b0f3acc94d8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_07820 d58630f5c5fe5775df9c1b0f3acc94d8 302 Gene3D G3DSA:3.40.190.290 91 293 7.4E-30 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 Pfam PF03486 HI0933-like protein 7 393 5.6E-153 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.1E-6 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 1.1E-6 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 1.1E-6 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 Gene3D G3DSA:3.50.50.60 8 392 3.2E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 Gene3D G3DSA:1.10.8.260 263 323 3.2E-130 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 Gene3D G3DSA:2.40.30.10 190 340 3.2E-130 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 SUPERFAMILY SSF160996 192 339 1.23E-41 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 393 7.4E-132 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 166 2.2E-8 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 2.2E-8 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.2E-8 T 14-10-2018 AMBLS11_00600 884b48f86397ccfa6961127dd9a68d41 395 SUPERFAMILY SSF51905 5 395 2.89E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_02505 a32c56207461fd3478f169129196589b 109 Pfam PF08274 PhnA Zinc-Ribbon 2 30 1.2E-14 T 14-10-2018 IPR013987 PhnA protein, N-terminal AMBLS11_02505 a32c56207461fd3478f169129196589b 109 SUPERFAMILY SSF82057 36 109 2.24E-22 T 14-10-2018 AMBLS11_02505 a32c56207461fd3478f169129196589b 109 Pfam PF03831 PhnA domain 42 109 1.2E-24 T 14-10-2018 IPR013988 PhnA protein, C-terminal AMBLS11_02505 a32c56207461fd3478f169129196589b 109 Gene3D G3DSA:2.30.30.40 40 109 1.0E-24 T 14-10-2018 AMBLS11_02505 a32c56207461fd3478f169129196589b 109 Gene3D G3DSA:2.20.25.10 1 39 9.4E-19 T 14-10-2018 AMBLS11_02505 a32c56207461fd3478f169129196589b 109 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 109 6.3E-37 T 14-10-2018 IPR004624 PhnA protein AMBLS11_02505 a32c56207461fd3478f169129196589b 109 SUPERFAMILY SSF57783 1 37 4.93E-14 T 14-10-2018 AMBLS11_16815 0d01241d87708bd1bc2af8c4ff96ce86 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 52.928 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein AMBLS11_16815 0d01241d87708bd1bc2af8c4ff96ce86 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 237 2.2E-63 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein AMBLS11_16815 0d01241d87708bd1bc2af8c4ff96ce86 238 Gene3D G3DSA:3.40.1350.60 81 238 2.2E-47 T 14-10-2018 AMBLS11_16815 0d01241d87708bd1bc2af8c4ff96ce86 238 Gene3D G3DSA:2.40.50.580 1 80 2.8E-32 T 14-10-2018 AMBLS11_16815 0d01241d87708bd1bc2af8c4ff96ce86 238 Pfam PF03749 Sugar fermentation stimulation protein 13 228 2.7E-70 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein AMBLS11_00320 9caf9bd42b8cc4cf396b4e4e25f8285a 189 SUPERFAMILY SSF64288 21 175 1.02E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMBLS11_00320 9caf9bd42b8cc4cf396b4e4e25f8285a 189 Gene3D G3DSA:3.40.1410.10 7 175 4.9E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMBLS11_00320 9caf9bd42b8cc4cf396b4e4e25f8285a 189 Pfam PF04345 Chorismate lyase 13 178 1.9E-34 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AMBLS11_00320 9caf9bd42b8cc4cf396b4e4e25f8285a 189 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 13 175 25.127 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AMBLS11_10015 51926ec461cbe906da1531f3980be176 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 344 46.822 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_10015 51926ec461cbe906da1531f3980be176 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 65 165 9.0E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain AMBLS11_10015 51926ec461cbe906da1531f3980be176 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 6.7E-149 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_10015 51926ec461cbe906da1531f3980be176 346 SUPERFAMILY SSF56042 172 340 1.27E-61 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_10015 51926ec461cbe906da1531f3980be176 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 339 2.7E-40 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMBLS11_10015 51926ec461cbe906da1531f3980be176 346 SUPERFAMILY SSF55326 8 171 2.99E-52 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMBLS11_10015 51926ec461cbe906da1531f3980be176 346 Gene3D G3DSA:3.30.1330.10 7 171 6.9E-67 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMBLS11_10015 51926ec461cbe906da1531f3980be176 346 Gene3D G3DSA:3.90.650.10 172 345 4.1E-70 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 SUPERFAMILY SSF51306 82 204 3.31E-35 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 SUPERFAMILY SSF46785 3 68 2.27E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 Hamap MF_00015 LexA repressor [lexA]. 3 205 31.5 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 Gene3D G3DSA:2.10.109.10 86 208 1.0E-43 T 14-10-2018 AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 7.1E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 7.1E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 7.1E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 Pfam PF00717 Peptidase S24-like 120 186 1.1E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 Pfam PF01726 LexA DNA binding domain 1 65 7.2E-30 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 TIGRFAM TIGR00498 lexA: repressor LexA 1 205 7.8E-79 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMBLS11_18650 497f7e48b588f524a5a4892f0bd1e44d 208 Gene3D G3DSA:1.10.10.10 1 69 7.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_02920 941b224aa9f690ebee1913324b756761 202 Gene3D G3DSA:2.40.100.10 35 200 5.7E-52 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_02920 941b224aa9f690ebee1913324b756761 202 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 40 197 1.8E-36 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMBLS11_02920 941b224aa9f690ebee1913324b756761 202 SUPERFAMILY SSF50891 38 199 3.94E-46 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_02920 941b224aa9f690ebee1913324b756761 202 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 74 91 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AMBLS11_02920 941b224aa9f690ebee1913324b756761 202 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 91 8.9E-9 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMBLS11_02920 941b224aa9f690ebee1913324b756761 202 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 8.9E-9 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMBLS11_02920 941b224aa9f690ebee1913324b756761 202 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 53 68 8.9E-9 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMBLS11_02920 941b224aa9f690ebee1913324b756761 202 PIRSF PIRSF001467 19 198 2.5E-20 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AMBLS11_14710 ac609da565c47f970b540ad93df47d83 445 SUPERFAMILY SSF103473 15 422 6.15E-33 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_14710 ac609da565c47f970b540ad93df47d83 445 Gene3D G3DSA:1.20.1250.20 232 422 2.0E-45 T 14-10-2018 AMBLS11_14710 ac609da565c47f970b540ad93df47d83 445 Pfam PF07690 Major Facilitator Superfamily 20 362 2.0E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_14710 ac609da565c47f970b540ad93df47d83 445 Gene3D G3DSA:1.20.1250.20 11 227 3.7E-50 T 14-10-2018 AMBLS11_14710 ac609da565c47f970b540ad93df47d83 445 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 13 415 7.4E-133 T 14-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AMBLS11_08360 11cee1099460200b944fd202a62ac92b 739 PIRSF PIRSF009407 1 739 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMBLS11_08360 11cee1099460200b944fd202a62ac92b 739 Gene3D G3DSA:3.40.718.10 145 296 2.8E-5 T 14-10-2018 AMBLS11_08360 11cee1099460200b944fd202a62ac92b 739 Gene3D G3DSA:3.40.718.10 380 648 9.4E-7 T 14-10-2018 AMBLS11_08360 11cee1099460200b944fd202a62ac92b 739 SUPERFAMILY SSF53659 3 738 0.0 T 14-10-2018 AMBLS11_08360 11cee1099460200b944fd202a62ac92b 739 Pfam PF03971 Monomeric isocitrate dehydrogenase 5 737 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMBLS11_08360 11cee1099460200b944fd202a62ac92b 739 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 738 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMBLS11_09170 a4aa82fbf56690c255775697f52c005d 137 Gene3D G3DSA:3.10.129.10 4 135 1.0E-49 T 14-10-2018 AMBLS11_09170 a4aa82fbf56690c255775697f52c005d 137 SUPERFAMILY SSF54637 4 134 3.13E-24 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_09170 a4aa82fbf56690c255775697f52c005d 137 Pfam PF03061 Thioesterase superfamily 45 118 1.4E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.08 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 SUPERFAMILY SSF54821 108 206 6.15E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 SMART SM00322 60 125 4.6E-7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 SUPERFAMILY SSF54814 2 106 1.36E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.5E-41 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 Pfam PF07650 KH domain 39 111 3.0E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 Gene3D G3DSA:3.30.300.20 17 107 2.1E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 6.5E-98 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMBLS11_01750 b2abeaa7da94ae36fded5997e23d7ff9 234 Gene3D G3DSA:3.30.1140.32 108 208 5.8E-45 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_03345 01178e54d5479abbac811098594db38b 275 PIRSF PIRSF000903 4 275 1.4E-101 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AMBLS11_03345 01178e54d5479abbac811098594db38b 275 Gene3D G3DSA:3.60.21.10 5 275 1.1E-73 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMBLS11_03345 01178e54d5479abbac811098594db38b 275 PRINTS PR00114 Serine/threonine phosphatase family signature 5 32 5.9E-6 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_03345 01178e54d5479abbac811098594db38b 275 PRINTS PR00114 Serine/threonine phosphatase family signature 35 62 5.9E-6 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_03345 01178e54d5479abbac811098594db38b 275 PRINTS PR00114 Serine/threonine phosphatase family signature 103 129 5.9E-6 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMBLS11_03345 01178e54d5479abbac811098594db38b 275 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 6 266 2.0E-89 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AMBLS11_03345 01178e54d5479abbac811098594db38b 275 Pfam PF00149 Calcineurin-like phosphoesterase 6 168 9.7E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMBLS11_03345 01178e54d5479abbac811098594db38b 275 SUPERFAMILY SSF56300 4 263 1.98E-53 T 14-10-2018 AMBLS11_09305 298e0f5c8e72d5bf658a5ebd1bf18414 174 Gene3D G3DSA:2.160.10.10 2 172 2.4E-62 T 14-10-2018 AMBLS11_09305 298e0f5c8e72d5bf658a5ebd1bf18414 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 44 8.3E-5 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_09305 298e0f5c8e72d5bf658a5ebd1bf18414 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 2.4E-10 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_09305 298e0f5c8e72d5bf658a5ebd1bf18414 174 SUPERFAMILY SSF51161 5 168 1.52E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_07105 1c457e664fad23d03364a2af7bf0b410 377 SUPERFAMILY SSF111369 56 224 2.75E-27 T 14-10-2018 AMBLS11_07105 1c457e664fad23d03364a2af7bf0b410 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 232 7.1E-8 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_07105 1c457e664fad23d03364a2af7bf0b410 377 Gene3D G3DSA:2.40.420.20 47 368 2.3E-68 T 14-10-2018 AMBLS11_07105 1c457e664fad23d03364a2af7bf0b410 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 371 1.4E-58 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_07105 1c457e664fad23d03364a2af7bf0b410 377 Gene3D G3DSA:1.10.287.470 100 158 2.3E-68 T 14-10-2018 AMBLS11_07105 1c457e664fad23d03364a2af7bf0b410 377 Gene3D G3DSA:2.40.50.100 66 198 2.3E-68 T 14-10-2018 AMBLS11_07105 1c457e664fad23d03364a2af7bf0b410 377 Gene3D G3DSA:2.40.30.170 52 283 2.3E-68 T 14-10-2018 AMBLS11_00245 8f75c4807ec71741de6cd8b3a6b3bf0f 700 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 35 693 2.8E-234 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 SUPERFAMILY SSF55785 8 117 1.32E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 415 1.7E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 Gene3D G3DSA:3.30.70.270 248 420 2.2E-44 T 14-10-2018 AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 SMART SM00086 73 115 9.0E-10 T 14-10-2018 IPR001610 PAC motif AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 SMART SM00086 202 244 7.8E-4 T 14-10-2018 IPR001610 PAC motif AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 SMART SM00091 127 198 3.6 T 14-10-2018 IPR000014 PAS domain AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 SMART SM00091 1 66 0.55 T 14-10-2018 IPR000014 PAS domain AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 Gene3D G3DSA:3.30.450.20 1 123 3.3E-23 T 14-10-2018 AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 SUPERFAMILY SSF55785 141 245 2.86E-13 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 SMART SM00267 251 420 3.5E-34 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 SUPERFAMILY SSF55073 267 414 2.51E-38 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 Pfam PF08447 PAS fold 23 109 1.4E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 Pfam PF08447 PAS fold 154 237 1.5E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 Gene3D G3DSA:3.30.450.20 124 242 3.5E-17 T 14-10-2018 AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 415 1.0E-37 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 251 2.1E-7 T 14-10-2018 IPR000014 PAS domain AMBLS11_07135 5061e0c8d2dd1a5d14e9ebd596fde350 425 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 122 7.0E-26 T 14-10-2018 IPR000014 PAS domain AMBLS11_05610 ad16e379de1563817d20a6c2084a4d68 640 PIRSF PIRSF000549 1 640 3.9E-292 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AMBLS11_05610 ad16e379de1563817d20a6c2084a4d68 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 9.5E-75 T 14-10-2018 IPR010650 PrkA C-terminal domain AMBLS11_05610 ad16e379de1563817d20a6c2084a4d68 640 SMART SM00763 19 376 2.1E-214 T 14-10-2018 IPR013153 PrkA AAA domain AMBLS11_05610 ad16e379de1563817d20a6c2084a4d68 640 SUPERFAMILY SSF52540 75 363 4.24E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05610 ad16e379de1563817d20a6c2084a4d68 640 Pfam PF08298 PrkA AAA domain 20 376 1.5E-174 T 14-10-2018 IPR013153 PrkA AAA domain AMBLS11_17930 6babafc94cebd93a88fe3386631a98f1 205 Pfam PF00510 Cytochrome c oxidase subunit III 18 203 7.3E-14 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17930 6babafc94cebd93a88fe3386631a98f1 205 Gene3D G3DSA:1.20.120.80 20 205 1.3E-56 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17930 6babafc94cebd93a88fe3386631a98f1 205 SUPERFAMILY SSF81452 12 203 3.4E-57 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17930 6babafc94cebd93a88fe3386631a98f1 205 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 27 205 4.9E-82 T 14-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 Pfam PF00490 Delta-aminolevulinic acid dehydratase 9 328 5.3E-141 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 SMART SM01004 6 330 1.5E-240 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 Gene3D G3DSA:3.20.20.70 1 332 2.4E-146 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 249 261 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 PIRSF PIRSF001415 1 332 2.3E-150 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 SUPERFAMILY SSF51569 5 331 6.96E-144 T 14-10-2018 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 249 265 4.1E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 157 176 4.1E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 195 214 4.1E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 304 323 4.1E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 274 289 4.1E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_02305 d2c6228df3c5268fbf00df57f874a279 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 126 140 4.1E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMBLS11_05900 311e5da3586c0109026ac286934e18dc 263 Pfam PF01578 Cytochrome C assembly protein 39 263 1.8E-33 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Pfam PF00009 Elongation factor Tu GTP binding domain 7 278 1.1E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 SUPERFAMILY SSF54980 401 478 2.99E-21 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 2.4E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 5.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 5.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 5.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 5.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 SUPERFAMILY SSF50447 261 399 3.09E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 SMART SM00838 597 684 7.7E-44 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 SUPERFAMILY SSF54211 476 596 1.29E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Gene3D G3DSA:3.30.230.10 481 684 9.9E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Pfam PF14492 Elongation Factor G, domain II 401 475 7.7E-30 T 14-10-2018 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Gene3D G3DSA:3.30.70.240 601 671 9.9E-84 T 14-10-2018 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 175 3.1E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 SUPERFAMILY SSF54980 600 691 1.44E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Gene3D G3DSA:3.40.50.300 1 290 4.9E-100 T 14-10-2018 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Pfam PF00679 Elongation factor G C-terminus 598 683 6.4E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Gene3D G3DSA:2.40.30.10 291 402 2.0E-37 T 14-10-2018 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Pfam PF03764 Elongation factor G, domain IV 476 594 4.8E-44 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 7.3E-298 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 SUPERFAMILY SSF52540 3 278 3.17E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Gene3D G3DSA:3.30.70.870 403 480 2.3E-27 T 14-10-2018 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 103.648 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMBLS11_06950 553ea478a69245c02d135eb66dbc5052 695 SMART SM00889 477 595 6.7E-62 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 SUPERFAMILY SSF51412 1 479 1.83E-127 T 14-10-2018 AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 SMART SM01240 7 475 0.0 T 14-10-2018 AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 8.2E-190 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 SMART SM00116 96 144 4.2E-8 T 14-10-2018 IPR000644 CBS domain AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 SMART SM00116 158 206 8.9E-8 T 14-10-2018 IPR000644 CBS domain AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 1.5E-161 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 PIRSF PIRSF000130 1 489 4.2E-199 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 83.023 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 Pfam PF00571 CBS domain 95 140 2.6E-9 T 14-10-2018 IPR000644 CBS domain AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 Pfam PF00571 CBS domain 155 202 1.1E-5 T 14-10-2018 IPR000644 CBS domain AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 SUPERFAMILY SSF54631 95 203 8.46E-28 T 14-10-2018 AMBLS11_12810 2706e00dba2bc63f93b37a3f6ed16f64 489 Gene3D G3DSA:3.20.20.70 1 488 4.5E-209 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_05970 5fa278cc5abe93434c8c9da53cddfb6a 253 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 253 114.523 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMBLS11_05970 5fa278cc5abe93434c8c9da53cddfb6a 253 SUPERFAMILY SSF75217 6 249 7.19E-102 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMBLS11_05970 5fa278cc5abe93434c8c9da53cddfb6a 253 PIRSF PIRSF000386 6 252 6.2E-101 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMBLS11_05970 5fa278cc5abe93434c8c9da53cddfb6a 253 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 27 225 4.0E-67 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMBLS11_05970 5fa278cc5abe93434c8c9da53cddfb6a 253 Gene3D G3DSA:3.40.1280.10 4 169 1.7E-68 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMBLS11_05970 5fa278cc5abe93434c8c9da53cddfb6a 253 Gene3D G3DSA:1.10.1270.20 170 253 4.4E-34 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMBLS11_05970 5fa278cc5abe93434c8c9da53cddfb6a 253 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 6 238 1.9E-102 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMBLS11_13320 cf714f2203b8ddf77bad0dd9efb41536 687 SUPERFAMILY SSF51445 272 560 1.28E-6 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_13320 cf714f2203b8ddf77bad0dd9efb41536 687 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 23 268 2.2E-64 T 14-10-2018 IPR029486 Glycosyl-hydrolase 97, N-terminal domain AMBLS11_13320 cf714f2203b8ddf77bad0dd9efb41536 687 Gene3D G3DSA:3.20.20.70 265 687 2.9E-156 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_13320 cf714f2203b8ddf77bad0dd9efb41536 687 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 577 683 2.2E-30 T 14-10-2018 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain AMBLS11_13320 cf714f2203b8ddf77bad0dd9efb41536 687 Pfam PF10566 Glycoside hydrolase 97 273 575 2.2E-108 T 14-10-2018 IPR019563 Glycosyl-hydrolase 97, catalytic domain AMBLS11_13320 cf714f2203b8ddf77bad0dd9efb41536 687 Gene3D G3DSA:2.70.98.10 20 261 8.4E-69 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMBLS11_12425 3b31440d08a59a85846738fb153870a9 151 Gene3D G3DSA:1.10.10.10 13 65 1.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_12425 3b31440d08a59a85846738fb153870a9 151 SUPERFAMILY SSF46689 16 54 5.91E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 PIRSF PIRSF000722 1 393 8.2E-134 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 SUPERFAMILY SSF53067 153 390 8.64E-81 T 14-10-2018 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 Gene3D G3DSA:3.30.420.40 2 191 6.3E-64 T 14-10-2018 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 Gene3D G3DSA:3.30.420.40 194 393 1.5E-73 T 14-10-2018 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 Pfam PF00871 Acetokinase family 5 386 3.9E-140 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 Hamap MF_00020 Acetate kinase [ackA]. 1 393 169.461 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 PRINTS PR00471 Acetate kinase family signature 169 182 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 PRINTS PR00471 Acetate kinase family signature 5 16 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 PRINTS PR00471 Acetate kinase family signature 318 334 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 PRINTS PR00471 Acetate kinase family signature 374 386 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 PRINTS PR00471 Acetate kinase family signature 296 309 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 PRINTS PR00471 Acetate kinase family signature 199 220 2.7E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 SUPERFAMILY SSF53067 4 191 7.64E-60 T 14-10-2018 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_06740 671c0501171c9626b43ab8b4e12c07cc 393 TIGRFAM TIGR00016 ackA: acetate kinase 2 390 8.8E-144 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMBLS11_15625 50523cf09b8ef22ad0839b5248263e55 183 SUPERFAMILY SSF58113 42 160 2.48E-5 T 14-10-2018 AMBLS11_15625 50523cf09b8ef22ad0839b5248263e55 183 Gene3D G3DSA:1.20.120.20 22 182 2.2E-5 T 14-10-2018 AMBLS11_02040 29819566a0d34ae1b34f71ae28b9899d 887 Gene3D G3DSA:1.10.3810.10 48 242 5.3E-75 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_02040 29819566a0d34ae1b34f71ae28b9899d 887 Pfam PF17092 Penicillin-binding protein OB-like domain 349 449 1.4E-24 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_02040 29819566a0d34ae1b34f71ae28b9899d 887 Gene3D G3DSA:3.40.710.10 243 327 4.6E-6 T 14-10-2018 AMBLS11_02040 29819566a0d34ae1b34f71ae28b9899d 887 SUPERFAMILY SSF56601 211 865 1.69E-109 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMBLS11_02040 29819566a0d34ae1b34f71ae28b9899d 887 Pfam PF00905 Penicillin binding protein transpeptidase domain 451 634 8.9E-25 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMBLS11_02040 29819566a0d34ae1b34f71ae28b9899d 887 Pfam PF00912 Transglycosylase 55 229 3.4E-60 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_02040 29819566a0d34ae1b34f71ae28b9899d 887 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 771 2.4E-161 T 14-10-2018 AMBLS11_02040 29819566a0d34ae1b34f71ae28b9899d 887 SUPERFAMILY SSF53955 43 255 3.66E-74 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMBLS11_00815 696ce855092993300adf6be4252f90ee 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 9.0E-78 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AMBLS11_00815 696ce855092993300adf6be4252f90ee 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 44.792 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AMBLS11_00815 696ce855092993300adf6be4252f90ee 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.3E-59 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AMBLS11_00815 696ce855092993300adf6be4252f90ee 161 SUPERFAMILY SSF89562 2 158 1.57E-43 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AMBLS11_00815 696ce855092993300adf6be4252f90ee 161 Gene3D G3DSA:3.50.30.40 1 161 6.8E-55 T 14-10-2018 AMBLS11_00815 696ce855092993300adf6be4252f90ee 161 Pfam PF03737 Aldolase/RraA 7 152 1.5E-34 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMBLS11_05885 b407be7305570d0cecf5c85edeef1901 175 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 16 80 1.6E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMBLS11_05885 b407be7305570d0cecf5c85edeef1901 175 SMART SM00855 15 136 2.7E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMBLS11_05885 b407be7305570d0cecf5c85edeef1901 175 SUPERFAMILY SSF53254 16 169 1.57E-18 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMBLS11_05885 b407be7305570d0cecf5c85edeef1901 175 Gene3D G3DSA:3.40.50.1240 15 174 1.2E-31 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMBLS11_05885 b407be7305570d0cecf5c85edeef1901 175 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 16 167 6.8E-28 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 AMBLS11_11645 c44abc22169e201cda2198e76e7f4069 221 Pfam PF13972 Bacterial transcriptional repressor 57 191 9.1E-18 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR AMBLS11_11645 c44abc22169e201cda2198e76e7f4069 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_11645 c44abc22169e201cda2198e76e7f4069 221 SUPERFAMILY SSF46689 3 65 2.51E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_11645 c44abc22169e201cda2198e76e7f4069 221 Gene3D G3DSA:1.10.357.10 1 212 3.6E-40 T 14-10-2018 AMBLS11_11645 c44abc22169e201cda2198e76e7f4069 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_11645 c44abc22169e201cda2198e76e7f4069 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_08735 64149c8227e3730acfa96787e46b2210 239 Pfam PF14219 Domain of unknown function (DUF4328) 61 213 5.7E-39 T 14-10-2018 IPR025565 Domain of unknown function DUF4328 AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 5.0E-36 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 Gene3D G3DSA:1.10.10.10 260 334 1.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 SUPERFAMILY SSF52540 23 254 8.22E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 2.4E-147 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 SUPERFAMILY SSF46785 260 331 2.12E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 2.1E-34 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 SMART SM00382 54 181 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 Gene3D G3DSA:1.10.8.60 185 258 2.1E-29 T 14-10-2018 AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 3.9E-118 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 Gene3D G3DSA:3.40.50.300 23 184 7.4E-40 T 14-10-2018 AMBLS11_06125 d701beae131249e1c4a25d4b2974ff2c 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.694 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMBLS11_17550 c21a90ba7790f380111735717d6c2a35 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 8.4E-18 T 14-10-2018 IPR012994 Membrane bound YbgT-like AMBLS11_17550 c21a90ba7790f380111735717d6c2a35 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 2.6E-20 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 PIRSF PIRSF001217 8 621 6.8E-205 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 613 9.2E-181 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 Gene3D G3DSA:3.90.226.10 96 316 4.4E-159 T 14-10-2018 AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 Pfam PF01343 Peptidase family S49 396 546 6.3E-48 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 Pfam PF01343 Peptidase family S49 139 296 2.1E-27 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 Gene3D G3DSA:3.40.1750.10 187 502 4.4E-159 T 14-10-2018 AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 SUPERFAMILY SSF52096 320 533 4.98E-43 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 333 544 1.9E-52 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 Gene3D G3DSA:3.90.226.10 319 544 4.4E-159 T 14-10-2018 AMBLS11_08405 c79f6f43b2ea25069fe472ee0d052642 621 SUPERFAMILY SSF52096 29 286 3.89E-25 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_11340 7202050e94b3c436bdf6dc41f13cbab8 263 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 176 263 1.4E-27 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMBLS11_11340 7202050e94b3c436bdf6dc41f13cbab8 263 Gene3D G3DSA:3.60.15.10 6 263 6.7E-90 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_11340 7202050e94b3c436bdf6dc41f13cbab8 263 SUPERFAMILY SSF56281 12 263 2.49E-67 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_11340 7202050e94b3c436bdf6dc41f13cbab8 263 PIRSF PIRSF005457 6 263 3.1E-97 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMBLS11_11340 7202050e94b3c436bdf6dc41f13cbab8 263 Pfam PF00753 Metallo-beta-lactamase superfamily 22 175 1.3E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_11340 7202050e94b3c436bdf6dc41f13cbab8 263 SMART SM00849 20 175 3.9E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_11340 7202050e94b3c436bdf6dc41f13cbab8 263 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 12 263 5.2E-104 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMBLS11_11340 7202050e94b3c436bdf6dc41f13cbab8 263 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 10 263 44.142 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 Gene3D G3DSA:3.40.47.10 6 435 1.7E-109 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 67.762 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 SUPERFAMILY SSF53901 15 294 4.27E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 PIRSF PIRSF000429 9 436 4.0E-114 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 Pfam PF02803 Thiolase, C-terminal domain 295 434 8.2E-37 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 9.1E-126 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 SUPERFAMILY SSF53901 296 434 1.87E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 3.4E-59 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMBLS11_05860 300529ba6527252463706079c1bfba72 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 1.0E-249 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AMBLS11_00160 e114b7f41d86bf4baa26a638fc571634 180 SUPERFAMILY SSF51161 7 177 4.44E-42 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_00160 e114b7f41d86bf4baa26a638fc571634 180 Gene3D G3DSA:2.160.10.10 1 180 2.8E-50 T 14-10-2018 AMBLS11_00160 e114b7f41d86bf4baa26a638fc571634 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 8.6E-6 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_18795 c60509f74a44b6ccd246cd9be1c34ffe 196 Pfam PF09335 SNARE associated Golgi protein 53 159 2.7E-16 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMBLS11_02145 078a0af853b76bc75e69a892c54b05ac 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 311 2.2E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_02145 078a0af853b76bc75e69a892c54b05ac 411 Gene3D G3DSA:2.40.420.20 64 379 3.2E-82 T 14-10-2018 AMBLS11_02145 078a0af853b76bc75e69a892c54b05ac 411 Gene3D G3DSA:1.10.287.470 113 204 3.2E-82 T 14-10-2018 AMBLS11_02145 078a0af853b76bc75e69a892c54b05ac 411 Gene3D G3DSA:2.40.30.170 68 320 3.2E-82 T 14-10-2018 AMBLS11_02145 078a0af853b76bc75e69a892c54b05ac 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 379 3.9E-51 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_02145 078a0af853b76bc75e69a892c54b05ac 411 Gene3D G3DSA:2.40.50.100 79 241 3.2E-82 T 14-10-2018 AMBLS11_02145 078a0af853b76bc75e69a892c54b05ac 411 SUPERFAMILY SSF111369 72 261 1.96E-26 T 14-10-2018 AMBLS11_09555 a4588425efcdce401d78d4e7c8141705 307 SUPERFAMILY SSF52402 154 304 1.17E-20 T 14-10-2018 AMBLS11_09555 a4588425efcdce401d78d4e7c8141705 307 Gene3D G3DSA:3.40.50.12370 1 307 7.2E-108 T 14-10-2018 AMBLS11_09555 a4588425efcdce401d78d4e7c8141705 307 Pfam PF00582 Universal stress protein family 5 144 6.8E-17 T 14-10-2018 IPR006016 UspA AMBLS11_09555 a4588425efcdce401d78d4e7c8141705 307 Pfam PF00582 Universal stress protein family 213 297 6.4E-14 T 14-10-2018 IPR006016 UspA AMBLS11_09555 a4588425efcdce401d78d4e7c8141705 307 SUPERFAMILY SSF52402 5 155 3.18E-24 T 14-10-2018 AMBLS11_09555 a4588425efcdce401d78d4e7c8141705 307 PRINTS PR01438 Universal stress protein signature 275 297 2.1E-7 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_09555 a4588425efcdce401d78d4e7c8141705 307 PRINTS PR01438 Universal stress protein signature 4 22 2.1E-7 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_09555 a4588425efcdce401d78d4e7c8141705 307 PRINTS PR01438 Universal stress protein signature 257 269 2.1E-7 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_10490 7d15c84aeae22df8dd6e26828f6f3b48 142 SUPERFAMILY SSF46785 3 133 5.34E-44 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_10490 7d15c84aeae22df8dd6e26828f6f3b48 142 Pfam PF01475 Ferric uptake regulator family 9 129 2.2E-47 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMBLS11_10490 7d15c84aeae22df8dd6e26828f6f3b48 142 Gene3D G3DSA:3.30.1490.190 84 139 6.0E-23 T 14-10-2018 AMBLS11_10490 7d15c84aeae22df8dd6e26828f6f3b48 142 Gene3D G3DSA:1.10.10.10 1 83 1.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15825 fb7b8d78bc3fa11e9f2f5a078fb9a101 277 SUPERFAMILY SSF56235 2 251 7.08E-46 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_15825 fb7b8d78bc3fa11e9f2f5a078fb9a101 277 Pfam PF13230 Glutamine amidotransferases class-II 2 266 3.6E-107 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 AMBLS11_15825 fb7b8d78bc3fa11e9f2f5a078fb9a101 277 Gene3D G3DSA:3.60.20.10 1 257 4.3E-94 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_06010 62f0468074eae8ebf7112b7fc38b5d63 427 Pfam PF00026 Eukaryotic aspartyl protease 18 155 8.5E-8 T 14-10-2018 IPR033121 Peptidase family A1 domain AMBLS11_06010 62f0468074eae8ebf7112b7fc38b5d63 427 SUPERFAMILY SSF50630 8 410 4.07E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_06010 62f0468074eae8ebf7112b7fc38b5d63 427 Gene3D G3DSA:2.40.70.10 3 201 4.0E-17 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_06010 62f0468074eae8ebf7112b7fc38b5d63 427 PRINTS PR00792 Pepsin (A1) aspartic protease family signature 382 397 4.4E-8 T 14-10-2018 IPR001461 Aspartic peptidase A1 family GO:0004190|GO:0006508 AMBLS11_06010 62f0468074eae8ebf7112b7fc38b5d63 427 PRINTS PR00792 Pepsin (A1) aspartic protease family signature 276 287 4.4E-8 T 14-10-2018 IPR001461 Aspartic peptidase A1 family GO:0004190|GO:0006508 AMBLS11_06010 62f0468074eae8ebf7112b7fc38b5d63 427 PRINTS PR00792 Pepsin (A1) aspartic protease family signature 24 44 4.4E-8 T 14-10-2018 IPR001461 Aspartic peptidase A1 family GO:0004190|GO:0006508 AMBLS11_06010 62f0468074eae8ebf7112b7fc38b5d63 427 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 33 44 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMBLS11_06010 62f0468074eae8ebf7112b7fc38b5d63 427 Pfam PF00026 Eukaryotic aspartyl protease 227 404 6.1E-7 T 14-10-2018 IPR033121 Peptidase family A1 domain AMBLS11_06010 62f0468074eae8ebf7112b7fc38b5d63 427 Gene3D G3DSA:2.40.70.10 202 427 2.3E-24 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_02075 9102698da820e6118122d1370bfd0474 278 Gene3D G3DSA:3.40.50.1820 1 277 2.7E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_02075 9102698da820e6118122d1370bfd0474 278 Pfam PF12146 Serine aminopeptidase, S33 19 109 2.1E-12 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 AMBLS11_02075 9102698da820e6118122d1370bfd0474 278 SUPERFAMILY SSF53474 2 277 1.33E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_02075 9102698da820e6118122d1370bfd0474 278 PIRSF PIRSF037442 1 277 6.3E-74 T 14-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AMBLS11_12900 d880f0470db9d251fa0877f026153ff3 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMBLS11_12900 d880f0470db9d251fa0877f026153ff3 405 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 403 9.6E-166 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMBLS11_12900 d880f0470db9d251fa0877f026153ff3 405 SUPERFAMILY SSF53383 4 400 7.88E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_12900 d880f0470db9d251fa0877f026153ff3 405 Gene3D G3DSA:3.90.1150.10 9 397 4.0E-167 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_12900 d880f0470db9d251fa0877f026153ff3 405 Gene3D G3DSA:3.40.640.10 36 295 4.0E-167 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_12900 d880f0470db9d251fa0877f026153ff3 405 Pfam PF00266 Aminotransferase class-V 25 393 2.8E-143 T 14-10-2018 IPR000192 Aminotransferase class V domain AMBLS11_04925 654107d91a9115576a3d023ba6052b59 151 Pfam PF01467 Cytidylyltransferase-like 6 108 4.0E-23 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMBLS11_04925 654107d91a9115576a3d023ba6052b59 151 SUPERFAMILY SSF52374 1 125 1.24E-29 T 14-10-2018 AMBLS11_04925 654107d91a9115576a3d023ba6052b59 151 Gene3D G3DSA:3.40.50.620 1 128 5.6E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_04925 654107d91a9115576a3d023ba6052b59 151 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 1.0E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 PIRSF PIRSF000332 1 416 1.0E-66 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 88 100 2.9E-13 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 329 346 2.9E-13 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 15 39 2.9E-13 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 283 310 2.9E-13 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 146 160 2.9E-13 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 173 188 2.9E-13 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 Gene3D G3DSA:3.50.50.60 1 370 1.8E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 Pfam PF00743 Flavin-binding monooxygenase-like 2 389 1.0E-57 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 SUPERFAMILY SSF51905 2 193 2.91E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08235 a74c7d1aec2d7cc52afa34677479409c 420 SUPERFAMILY SSF51905 160 360 2.85E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_05805 08bcfc0e37051208c1d8d961a7298063 501 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site AMBLS11_05805 08bcfc0e37051208c1d8d961a7298063 501 Pfam PF00474 Sodium:solute symporter family 34 437 2.9E-100 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_05805 08bcfc0e37051208c1d8d961a7298063 501 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 437 7.3E-89 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_05805 08bcfc0e37051208c1d8d961a7298063 501 Gene3D G3DSA:1.20.1730.10 5 498 1.1E-90 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMBLS11_05805 08bcfc0e37051208c1d8d961a7298063 501 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 5 496 1.3E-207 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 Pfam PF13186 Iron-sulfur cluster-binding domain 252 317 9.4E-10 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 SUPERFAMILY SSF102114 18 326 1.83E-77 T 14-10-2018 AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 Gene3D G3DSA:3.20.20.70 21 303 2.7E-51 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 252 344 1.3E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 Pfam PF13353 4Fe-4S single cluster domain 29 105 1.0E-6 T 14-10-2018 AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 Pfam PF04055 Radical SAM superfamily 27 180 1.2E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 383 165.633 T 14-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 PIRSF PIRSF037420 7 365 3.8E-121 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 16 371 3.3E-162 T 14-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AMBLS11_15260 7a8ef42e837dc4d1e8594646e21288c5 386 SMART SM00729 21 222 2.3E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 Pfam PF00005 ABC transporter 286 429 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 SMART SM00382 29 217 6.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 SMART SM00382 294 485 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 SUPERFAMILY SSF52540 268 491 3.11E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 Pfam PF12698 ABC-2 family transporter protein 563 899 1.4E-35 T 14-10-2018 AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 Gene3D G3DSA:3.40.50.300 1 241 1.4E-61 T 14-10-2018 AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 Gene3D G3DSA:3.40.50.300 257 509 1.9E-64 T 14-10-2018 AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 SUPERFAMILY SSF52540 4 231 1.54E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00420 988e471a041b021bdb4a1a5bae07c713 909 Pfam PF00005 ABC transporter 20 167 3.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_05655 cc68350567eb71824c7a40a73680018a 211 SMART SM00479 16 201 7.0E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_05655 cc68350567eb71824c7a40a73680018a 211 Gene3D G3DSA:3.30.420.10 7 210 3.3E-55 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_05655 cc68350567eb71824c7a40a73680018a 211 Pfam PF00929 Exonuclease 18 192 7.6E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_05655 cc68350567eb71824c7a40a73680018a 211 Hamap MF_00157 Ribonuclease T [rnt]. 1 211 108.332 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AMBLS11_05655 cc68350567eb71824c7a40a73680018a 211 TIGRFAM TIGR01298 RNaseT: ribonuclease T 8 206 1.7E-97 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AMBLS11_05655 cc68350567eb71824c7a40a73680018a 211 SUPERFAMILY SSF53098 7 205 1.52E-58 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 Gene3D G3DSA:3.30.2090.10 707 795 3.2E-276 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 SUPERFAMILY SSF82714 193 270 1.96E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 Gene3D G3DSA:3.30.70.1430 50 803 3.2E-276 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 SUPERFAMILY SSF82866 816 1016 2.88E-45 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 1.7E-65 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 1.7E-65 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.7E-65 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 1.7E-65 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.7E-65 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 1.7E-65 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 1.7E-65 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 1.7E-65 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.7E-65 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 SUPERFAMILY SSF82693 559 651 2.44E-16 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 SUPERFAMILY SSF82693 50 143 4.45E-22 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 Pfam PF00873 AcrB/AcrD/AcrF family 15 1012 5.1E-256 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 SUPERFAMILY SSF82693 146 326 1.62E-14 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 Gene3D G3DSA:3.30.70.1430 561 656 3.2E-276 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 Gene3D G3DSA:1.20.1640.10 20 506 3.2E-276 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 Gene3D G3DSA:3.30.70.1440 657 852 3.2E-276 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 SUPERFAMILY SSF82866 296 493 3.14E-42 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 SUPERFAMILY SSF82714 708 790 4.58E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 Gene3D G3DSA:3.30.70.1320 142 330 3.2E-276 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 Gene3D G3DSA:1.20.1640.10 507 1009 3.2E-276 T 14-10-2018 AMBLS11_05940 870b5ca5dff714c74157a4baac61aa96 1038 Gene3D G3DSA:3.30.2090.10 188 274 3.2E-276 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_16660 bde8f235f0fd682ce3ad072e21e9e633 332 Pfam PF08443 RimK-like ATP-grasp domain 221 328 3.5E-9 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AMBLS11_16660 bde8f235f0fd682ce3ad072e21e9e633 332 Gene3D G3DSA:3.30.470.20 229 332 1.1E-15 T 14-10-2018 AMBLS11_16660 bde8f235f0fd682ce3ad072e21e9e633 332 SUPERFAMILY SSF56059 142 330 4.42E-17 T 14-10-2018 AMBLS11_13260 82d293bed5afa37e268facb37c4ed117 764 Gene3D G3DSA:1.20.1640.10 201 385 8.8E-12 T 14-10-2018 AMBLS11_13260 82d293bed5afa37e268facb37c4ed117 764 Gene3D G3DSA:1.20.1640.10 580 764 6.1E-12 T 14-10-2018 AMBLS11_13260 82d293bed5afa37e268facb37c4ed117 764 Pfam PF03176 MMPL family 557 758 1.1E-11 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMBLS11_13260 82d293bed5afa37e268facb37c4ed117 764 Pfam PF03176 MMPL family 47 373 2.9E-23 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMBLS11_13260 82d293bed5afa37e268facb37c4ed117 764 SUPERFAMILY SSF82866 154 373 3.53E-32 T 14-10-2018 AMBLS11_13260 82d293bed5afa37e268facb37c4ed117 764 SUPERFAMILY SSF82866 561 756 4.45E-28 T 14-10-2018 AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 Gene3D G3DSA:3.40.50.2300 159 289 7.5E-75 T 14-10-2018 AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 SUPERFAMILY SSF47413 2 59 1.08E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.6E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 SUPERFAMILY SSF53822 61 329 3.53E-79 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 Gene3D G3DSA:1.10.260.40 1 58 1.0E-22 T 14-10-2018 AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 SMART SM00354 1 71 1.7E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 Gene3D G3DSA:3.40.50.2300 62 302 7.5E-75 T 14-10-2018 AMBLS11_18875 cee1febf27a72efb48e4a66ec1d231a9 333 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.3E-30 T 14-10-2018 AMBLS11_09280 4a2c6ac3c54e5eff154e358d726bd1a4 325 Gene3D G3DSA:3.40.50.920 194 324 1.1E-52 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_09280 4a2c6ac3c54e5eff154e358d726bd1a4 325 SUPERFAMILY SSF52922 189 324 4.32E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_09280 4a2c6ac3c54e5eff154e358d726bd1a4 325 SMART SM00861 4 180 1.7E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_09280 4a2c6ac3c54e5eff154e358d726bd1a4 325 Gene3D G3DSA:3.40.50.970 1 193 2.8E-89 T 14-10-2018 AMBLS11_09280 4a2c6ac3c54e5eff154e358d726bd1a4 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 2.2E-51 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_09280 4a2c6ac3c54e5eff154e358d726bd1a4 325 SUPERFAMILY SSF52518 1 205 7.07E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_09280 4a2c6ac3c54e5eff154e358d726bd1a4 325 Pfam PF02780 Transketolase, C-terminal domain 195 312 2.4E-35 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMBLS11_04410 6de83f670bf08658184026658177fa87 224 SMART SM00382 30 198 5.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04410 6de83f670bf08658184026658177fa87 224 Pfam PF00005 ABC transporter 22 152 1.2E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_04410 6de83f670bf08658184026658177fa87 224 Gene3D G3DSA:3.40.50.300 1 223 6.4E-38 T 14-10-2018 AMBLS11_04410 6de83f670bf08658184026658177fa87 224 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_04410 6de83f670bf08658184026658177fa87 224 SUPERFAMILY SSF52540 2 209 1.0E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06880 b278f6d48ba0075e6e99048a0bde9e1f 315 Gene3D G3DSA:3.40.50.2020 7 302 1.0E-133 T 14-10-2018 AMBLS11_06880 b278f6d48ba0075e6e99048a0bde9e1f 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 203 313 1.6E-31 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMBLS11_06880 b278f6d48ba0075e6e99048a0bde9e1f 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AMBLS11_06880 b278f6d48ba0075e6e99048a0bde9e1f 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 9.8E-51 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMBLS11_06880 b278f6d48ba0075e6e99048a0bde9e1f 315 Gene3D G3DSA:3.40.50.2020 148 290 1.0E-133 T 14-10-2018 AMBLS11_06880 b278f6d48ba0075e6e99048a0bde9e1f 315 SUPERFAMILY SSF53271 69 306 5.7E-65 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMBLS11_06880 b278f6d48ba0075e6e99048a0bde9e1f 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.2E-123 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMBLS11_06880 b278f6d48ba0075e6e99048a0bde9e1f 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.07 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AMBLS11_06880 b278f6d48ba0075e6e99048a0bde9e1f 315 SMART SM01400 4 121 2.2E-78 T 14-10-2018 AMBLS11_03045 b8f1b1848fd0361fd8b8e057674c539a 476 Gene3D G3DSA:2.60.40.10 359 475 9.9E-35 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_03045 b8f1b1848fd0361fd8b8e057674c539a 476 Pfam PF12801 4Fe-4S binding domain 96 138 3.0E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMBLS11_03045 b8f1b1848fd0361fd8b8e057674c539a 476 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 475 7.7E-29 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AMBLS11_03045 b8f1b1848fd0361fd8b8e057674c539a 476 SUPERFAMILY SSF54862 106 359 6.49E-29 T 14-10-2018 AMBLS11_03045 b8f1b1848fd0361fd8b8e057674c539a 476 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 475 1.1E-164 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AMBLS11_03045 b8f1b1848fd0361fd8b8e057674c539a 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 276 287 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMBLS11_03045 b8f1b1848fd0361fd8b8e057674c539a 476 Pfam PF13746 4Fe-4S dicluster domain 220 329 4.1E-46 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMBLS11_07245 ae30702cdb0212526bf1a5500423251e 414 Pfam PF01546 Peptidase family M20/M25/M40 81 409 4.1E-30 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMBLS11_07245 ae30702cdb0212526bf1a5500423251e 414 SUPERFAMILY SSF55031 217 332 2.79E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMBLS11_07245 ae30702cdb0212526bf1a5500423251e 414 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 27 410 1.7E-119 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AMBLS11_07245 ae30702cdb0212526bf1a5500423251e 414 Gene3D G3DSA:3.30.70.360 217 330 5.0E-135 T 14-10-2018 AMBLS11_07245 ae30702cdb0212526bf1a5500423251e 414 Pfam PF07687 Peptidase dimerisation domain 217 315 9.7E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMBLS11_07245 ae30702cdb0212526bf1a5500423251e 414 Gene3D G3DSA:3.40.630.10 31 406 5.0E-135 T 14-10-2018 AMBLS11_07245 ae30702cdb0212526bf1a5500423251e 414 SUPERFAMILY SSF53187 24 411 1.38E-77 T 14-10-2018 AMBLS11_07245 ae30702cdb0212526bf1a5500423251e 414 PIRSF PIRSF001235 8 414 5.2E-130 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AMBLS11_00120 12cf85c7b309c02b880c806614e030b5 369 SUPERFAMILY SSF102405 85 289 2.29E-40 T 14-10-2018 AMBLS11_00120 12cf85c7b309c02b880c806614e030b5 369 Gene3D G3DSA:3.40.50.450 1 292 3.2E-95 T 14-10-2018 AMBLS11_00120 12cf85c7b309c02b880c806614e030b5 369 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 78 289 1.7E-75 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMBLS11_00120 12cf85c7b309c02b880c806614e030b5 369 Pfam PF02481 DNA recombination-mediator protein A 80 281 5.6E-76 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMBLS11_16480 a09867405bdf9c18e78fc2dbc5115c8e 187 Pfam PF01292 Prokaryotic cytochrome b561 13 183 6.1E-21 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMBLS11_16480 a09867405bdf9c18e78fc2dbc5115c8e 187 SUPERFAMILY SSF81342 8 186 2.35E-28 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMBLS11_16480 a09867405bdf9c18e78fc2dbc5115c8e 187 Gene3D G3DSA:1.20.950.20 1 173 1.6E-11 T 14-10-2018 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Pfam PF07244 Surface antigen variable number repeat 96 176 1.1E-8 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Pfam PF07244 Surface antigen variable number repeat 180 267 2.4E-14 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Pfam PF07244 Surface antigen variable number repeat 351 425 2.8E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Pfam PF07244 Surface antigen variable number repeat 270 348 6.5E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Gene3D G3DSA:3.10.20.310 96 176 1.1E-13 T 14-10-2018 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Gene3D G3DSA:3.10.20.310 179 268 2.9E-21 T 14-10-2018 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Gene3D G3DSA:3.10.20.310 269 350 7.2E-17 T 14-10-2018 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 PIRSF PIRSF006076 1 825 5.7E-231 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Gene3D G3DSA:2.40.160.50 430 825 1.1E-112 T 14-10-2018 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Pfam PF01103 Surface antigen 452 825 2.7E-78 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 825 5.5E-261 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Gene3D G3DSA:3.10.20.310 22 95 1.2E-16 T 14-10-2018 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 825 24.229 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMBLS11_04595 46def886dae3480c4fd5a04f07b2320c 825 Gene3D G3DSA:3.10.20.310 351 429 1.4E-19 T 14-10-2018 AMBLS11_14010 1586324219527129f0c645339c7c9f60 303 Gene3D G3DSA:3.30.1700.10 129 303 1.8E-65 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMBLS11_14010 1586324219527129f0c645339c7c9f60 303 SUPERFAMILY SSF54211 3 126 1.29E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_14010 1586324219527129f0c645339c7c9f60 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 1.7E-126 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMBLS11_14010 1586324219527129f0c645339c7c9f60 303 SUPERFAMILY SSF54211 134 278 6.68E-51 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_14010 1586324219527129f0c645339c7c9f60 303 Gene3D G3DSA:3.30.230.20 1 128 7.7E-52 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMBLS11_14010 1586324219527129f0c645339c7c9f60 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 45.355 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMBLS11_14010 1586324219527129f0c645339c7c9f60 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 6.6E-107 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Gene3D G3DSA:3.30.1330.10 614 811 1.1E-22 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 SUPERFAMILY SSF56042 826 1035 1.2E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Gene3D G3DSA:3.30.1330.10 214 421 1.7E-40 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 SUPERFAMILY SSF56042 431 615 4.64E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 SUPERFAMILY SSF55326 221 428 2.48E-63 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 SMART SM01211 1041 1294 2.6E-149 T 14-10-2018 AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1293 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Gene3D G3DSA:3.40.50.880 982 1295 7.2E-136 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 SUPERFAMILY SSF55326 621 816 7.59E-66 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 SUPERFAMILY SSF109736 156 220 2.35E-21 T 14-10-2018 AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 588 1.7E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 838 962 7.5E-13 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 SUPERFAMILY SSF52317 1037 1294 1.4E-93 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Gene3D G3DSA:1.10.8.750 153 213 4.2E-26 T 14-10-2018 AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 2.5E-106 T 14-10-2018 AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Gene3D G3DSA:3.90.650.10 812 981 4.4E-26 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Gene3D G3DSA:3.90.650.10 422 606 2.1E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1295 21.265 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_04670 a70f861bf3644c03ca4c756580620157 1295 SUPERFAMILY SSF82697 1 152 3.03E-47 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_16590 71486c42d06c9c45a4027e8f6e5db42a 186 SMART SM00448 68 180 1.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16590 71486c42d06c9c45a4027e8f6e5db42a 186 Gene3D G3DSA:3.40.50.2300 65 186 4.6E-26 T 14-10-2018 AMBLS11_16590 71486c42d06c9c45a4027e8f6e5db42a 186 SUPERFAMILY SSF46955 3 54 1.28E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_16590 71486c42d06c9c45a4027e8f6e5db42a 186 Pfam PF00072 Response regulator receiver domain 70 179 1.1E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16590 71486c42d06c9c45a4027e8f6e5db42a 186 SUPERFAMILY SSF52172 68 185 7.12E-27 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_16590 71486c42d06c9c45a4027e8f6e5db42a 186 Gene3D G3DSA:1.10.1660.10 2 53 1.7E-5 T 14-10-2018 AMBLS11_16590 71486c42d06c9c45a4027e8f6e5db42a 186 Pfam PF12728 Helix-turn-helix domain 4 54 5.1E-8 T 14-10-2018 AMBLS11_17640 075010ba4d36ea1c2007062dd13f76cd 257 SUPERFAMILY SSF63380 5 117 3.4E-12 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_17640 075010ba4d36ea1c2007062dd13f76cd 257 Gene3D G3DSA:3.40.50.80 119 255 2.9E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_17640 075010ba4d36ea1c2007062dd13f76cd 257 Gene3D G3DSA:2.40.30.10 1 117 1.1E-27 T 14-10-2018 AMBLS11_17640 075010ba4d36ea1c2007062dd13f76cd 257 Pfam PF04954 Siderophore-interacting protein 125 235 4.6E-27 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AMBLS11_17640 075010ba4d36ea1c2007062dd13f76cd 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 11 117 6.7E-23 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 Gene3D G3DSA:1.10.150.20 67 139 1.0E-25 T 14-10-2018 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 Gene3D G3DSA:1.10.8.10 159 206 5.6E-19 T 14-10-2018 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 Gene3D G3DSA:2.40.50.140 1 66 3.8E-28 T 14-10-2018 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 Pfam PF07499 RuvA, C-terminal domain 161 204 4.2E-13 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 1.4E-58 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 SMART SM00278 73 92 85.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 SMART SM00278 108 127 0.08 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 SUPERFAMILY SSF46929 160 204 1.29E-10 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 Pfam PF01330 RuvA N terminal domain 1 62 2.8E-22 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 206 31.192 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 SUPERFAMILY SSF50249 1 63 7.42E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 Pfam PF14520 Helix-hairpin-helix domain 72 130 7.1E-17 T 14-10-2018 AMBLS11_06120 16128c9f5fd231114fdad5db66e3b62e 206 SUPERFAMILY SSF47781 66 135 2.61E-20 T 14-10-2018 IPR010994 RuvA domain 2-like AMBLS11_13800 38b423523ce976be47ee5af68a7daff0 318 SUPERFAMILY SSF52402 148 311 2.51E-21 T 14-10-2018 AMBLS11_13800 38b423523ce976be47ee5af68a7daff0 318 Pfam PF00582 Universal stress protein family 148 305 5.7E-12 T 14-10-2018 IPR006016 UspA AMBLS11_13800 38b423523ce976be47ee5af68a7daff0 318 SUPERFAMILY SSF52402 17 140 4.1E-7 T 14-10-2018 AMBLS11_13800 38b423523ce976be47ee5af68a7daff0 318 PRINTS PR01438 Universal stress protein signature 147 165 9.6E-7 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_13800 38b423523ce976be47ee5af68a7daff0 318 PRINTS PR01438 Universal stress protein signature 284 306 9.6E-7 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_13800 38b423523ce976be47ee5af68a7daff0 318 PRINTS PR01438 Universal stress protein signature 266 278 9.6E-7 T 14-10-2018 IPR006015 Universal stress protein A AMBLS11_13800 38b423523ce976be47ee5af68a7daff0 318 Gene3D G3DSA:3.40.50.12370 8 318 6.6E-62 T 14-10-2018 AMBLS11_09355 3a7f9878f7f5912343248a3631e61eb7 51 Pfam PF11197 Protein of unknown function (DUF2835) 3 49 1.1E-15 T 14-10-2018 IPR021363 Protein of unknown function DUF2835 AMBLS11_18730 017cb18ce85f6c0d631c07f29f5c21fb 300 SUPERFAMILY SSF103481 190 285 2.09E-8 T 14-10-2018 AMBLS11_18730 017cb18ce85f6c0d631c07f29f5c21fb 300 Pfam PF00892 EamA-like transporter family 6 135 7.8E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_18730 017cb18ce85f6c0d631c07f29f5c21fb 300 Pfam PF00892 EamA-like transporter family 151 283 2.4E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_18730 017cb18ce85f6c0d631c07f29f5c21fb 300 SUPERFAMILY SSF103481 36 138 4.05E-10 T 14-10-2018 AMBLS11_08950 b0e0e726c3c97a92a98bf76938545deb 286 Pfam PF01734 Patatin-like phospholipase 5 52 1.7E-6 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMBLS11_08950 b0e0e726c3c97a92a98bf76938545deb 286 Gene3D G3DSA:3.40.1090.10 84 228 5.9E-10 T 14-10-2018 AMBLS11_08950 b0e0e726c3c97a92a98bf76938545deb 286 Gene3D G3DSA:3.40.1090.10 1 82 2.4E-9 T 14-10-2018 AMBLS11_08950 b0e0e726c3c97a92a98bf76938545deb 286 SUPERFAMILY SSF52151 1 270 2.51E-35 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMBLS11_03440 cbb5c91b80c50af9342938f625ba5ae1 215 SUPERFAMILY SSF48452 60 179 5.31E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_03440 cbb5c91b80c50af9342938f625ba5ae1 215 Gene3D G3DSA:1.25.40.10 22 194 3.8E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 Gene3D G3DSA:1.10.10.60 389 442 2.7E-12 T 14-10-2018 AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 SUPERFAMILY SSF52172 7 183 4.27E-45 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 SUPERFAMILY SSF52540 138 383 1.61E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 Gene3D G3DSA:3.40.50.2300 1 130 1.0E-37 T 14-10-2018 AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 SUPERFAMILY SSF46689 390 440 1.43E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 Pfam PF00072 Response regulator receiver domain 12 120 6.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 SMART SM00382 159 302 8.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 Gene3D G3DSA:1.10.8.60 310 388 2.1E-20 T 14-10-2018 AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 SMART SM00448 9 120 5.8E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 Gene3D G3DSA:3.40.50.300 131 309 6.7E-65 T 14-10-2018 AMBLS11_06090 e17968bc1b8461c66cbd2e409c94eb09 446 Pfam PF00158 Sigma-54 interaction domain 139 305 1.4E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_06045 f0e069ecad6d619eb24a86ace76d759a 266 SMART SM00448 9 123 9.5E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06045 f0e069ecad6d619eb24a86ace76d759a 266 SMART SM00448 145 260 1.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06045 f0e069ecad6d619eb24a86ace76d759a 266 Gene3D G3DSA:3.40.50.2300 1 127 1.4E-16 T 14-10-2018 AMBLS11_06045 f0e069ecad6d619eb24a86ace76d759a 266 SUPERFAMILY SSF52172 143 265 9.96E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_06045 f0e069ecad6d619eb24a86ace76d759a 266 SUPERFAMILY SSF52172 7 129 6.69E-18 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_06045 f0e069ecad6d619eb24a86ace76d759a 266 Gene3D G3DSA:3.40.50.2300 141 265 4.2E-31 T 14-10-2018 AMBLS11_06045 f0e069ecad6d619eb24a86ace76d759a 266 Pfam PF00072 Response regulator receiver domain 147 260 3.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06045 f0e069ecad6d619eb24a86ace76d759a 266 Pfam PF00072 Response regulator receiver domain 11 123 4.6E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_00790 14fa71b398b0484e6141107dcb967c9e 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMBLS11_00790 14fa71b398b0484e6141107dcb967c9e 276 Pfam PF01678 Diaminopimelate epimerase 5 125 5.7E-36 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMBLS11_00790 14fa71b398b0484e6141107dcb967c9e 276 Pfam PF01678 Diaminopimelate epimerase 155 269 2.8E-30 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMBLS11_00790 14fa71b398b0484e6141107dcb967c9e 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.987 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMBLS11_00790 14fa71b398b0484e6141107dcb967c9e 276 Gene3D G3DSA:3.10.310.10 5 272 1.4E-104 T 14-10-2018 AMBLS11_00790 14fa71b398b0484e6141107dcb967c9e 276 Gene3D G3DSA:3.10.310.10 117 263 1.4E-104 T 14-10-2018 AMBLS11_00790 14fa71b398b0484e6141107dcb967c9e 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 9.2E-99 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMBLS11_00790 14fa71b398b0484e6141107dcb967c9e 276 SUPERFAMILY SSF54506 3 276 4.94E-55 T 14-10-2018 AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 SUPERFAMILY SSF55021 333 408 2.59E-16 T 14-10-2018 AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 Gene3D G3DSA:3.40.50.720 109 297 1.7E-111 T 14-10-2018 AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 8.5E-39 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 SUPERFAMILY SSF52283 7 135 1.38E-50 T 14-10-2018 AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 SUPERFAMILY SSF51735 108 295 1.18E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 Gene3D G3DSA:3.30.70.260 328 408 3.5E-32 T 14-10-2018 AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.4E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMBLS11_13875 968dfd9f3c8d5d64e14d1a37180e15a0 409 Gene3D G3DSA:3.40.50.720 14 312 1.7E-111 T 14-10-2018 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 SUPERFAMILY SSF51735 97 244 8.66E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 Gene3D G3DSA:1.10.3660.10 255 380 3.3E-44 T 14-10-2018 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 TIGRFAM TIGR01799 CM_T: chorismate mutase 11 92 1.4E-32 T 14-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 SUPERFAMILY SSF48179 248 372 3.29E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 Gene3D G3DSA:3.40.50.720 87 253 3.4E-39 T 14-10-2018 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 SMART SM00830 15 95 1.6E-30 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 PIRSF PIRSF001499 7 380 1.6E-142 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 Gene3D G3DSA:1.20.59.10 3 86 3.4E-17 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 Pfam PF02153 Prephenate dehydrogenase 142 350 4.8E-30 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 Pfam PF01817 Chorismate mutase type II 15 92 1.8E-19 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMBLS11_06005 9273679f37b8acfcbc89cc62c1ed7afe 384 SUPERFAMILY SSF48600 7 94 3.48E-23 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMBLS11_18700 ba6ef9f30f3c6c399782fa19a196e89e 663 Gene3D G3DSA:3.40.50.1820 376 659 3.4E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_18700 ba6ef9f30f3c6c399782fa19a196e89e 663 SUPERFAMILY SSF82171 45 388 1.57E-14 T 14-10-2018 AMBLS11_18700 ba6ef9f30f3c6c399782fa19a196e89e 663 SUPERFAMILY SSF53474 400 647 3.72E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_18700 ba6ef9f30f3c6c399782fa19a196e89e 663 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 451 475 2.8E-5 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_18700 ba6ef9f30f3c6c399782fa19a196e89e 663 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 563 578 2.8E-5 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_18700 ba6ef9f30f3c6c399782fa19a196e89e 663 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 425 443 2.8E-5 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_18700 ba6ef9f30f3c6c399782fa19a196e89e 663 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 509 529 2.8E-5 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_18700 ba6ef9f30f3c6c399782fa19a196e89e 663 Pfam PF00326 Prolyl oligopeptidase family 442 647 2.0E-42 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_10345 17d40a85ee1ae166ec453c4475662d11 831 Pfam PF00326 Prolyl oligopeptidase family 636 831 3.9E-41 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_10345 17d40a85ee1ae166ec453c4475662d11 831 Gene3D G3DSA:2.120.10.30 42 255 2.5E-5 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_10345 17d40a85ee1ae166ec453c4475662d11 831 SUPERFAMILY SSF53474 586 831 1.18E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_10345 17d40a85ee1ae166ec453c4475662d11 831 SUPERFAMILY SSF82171 59 573 6.8E-35 T 14-10-2018 AMBLS11_10345 17d40a85ee1ae166ec453c4475662d11 831 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 383 543 9.6E-21 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AMBLS11_10345 17d40a85ee1ae166ec453c4475662d11 831 Gene3D G3DSA:3.40.50.1820 576 831 4.9E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_10345 17d40a85ee1ae166ec453c4475662d11 831 Gene3D G3DSA:2.140.10.30 256 570 6.7E-26 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AMBLS11_14380 394be7c7c97b62daaf9d1a5b05bda821 155 Gene3D G3DSA:3.40.50.2300 1 137 4.5E-37 T 14-10-2018 AMBLS11_14380 394be7c7c97b62daaf9d1a5b05bda821 155 SUPERFAMILY SSF52788 1 134 1.96E-36 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMBLS11_14380 394be7c7c97b62daaf9d1a5b05bda821 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 132 6.5E-20 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMBLS11_14380 394be7c7c97b62daaf9d1a5b05bda821 155 SMART SM00226 1 135 1.9E-32 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 Pfam PF01055 Glycosyl hydrolases family 31 234 670 1.4E-112 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 Gene3D G3DSA:3.20.20.80 239 618 3.8E-139 T 14-10-2018 AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 SUPERFAMILY SSF51011 589 667 1.15E-15 T 14-10-2018 AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 SUPERFAMILY SSF51445 242 587 1.33E-70 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 SUPERFAMILY SSF74650 12 238 9.1E-36 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 Gene3D G3DSA:2.60.40.1180 619 668 1.9E-13 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 Gene3D G3DSA:2.60.40.1180 669 805 9.5E-28 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 Pfam PF13802 Galactose mutarotase-like 150 212 4.9E-11 T 14-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 Pfam PF17137 Domain of unknown function (DUF5110) 689 762 2.4E-12 T 14-10-2018 IPR033403 Domain of unknown function DUF5110 AMBLS11_18205 008cc04ea72c5207fd5d80743f3c07d9 805 Gene3D G3DSA:2.60.40.1760 28 233 1.5E-44 T 14-10-2018 AMBLS11_09180 c921d1e6e7b0bb68c36c7230b0135c79 184 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 35 169 6.1E-8 T 14-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) AMBLS11_08895 1003a4c67a7b6381c129afb0acb9202d 115 SUPERFAMILY SSF81343 5 115 1.63E-25 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08895 1003a4c67a7b6381c129afb0acb9202d 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 2.3E-29 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AMBLS11_08895 1003a4c67a7b6381c129afb0acb9202d 115 Gene3D G3DSA:1.20.1300.10 1 115 6.9E-26 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMBLS11_08895 1003a4c67a7b6381c129afb0acb9202d 115 PIRSF PIRSF000169 1 115 5.3E-37 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 Gene3D G3DSA:1.10.8.60 352 439 1.5E-32 T 14-10-2018 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 SMART SM01086 654 743 8.1E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 Gene3D G3DSA:1.10.8.60 654 757 3.8E-28 T 14-10-2018 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 Gene3D G3DSA:3.40.50.300 440 653 5.9E-78 T 14-10-2018 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 2.5E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 2.5E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 2.5E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 2.5E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 SUPERFAMILY SSF81923 1 143 3.01E-58 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 Gene3D G3DSA:3.40.50.300 157 351 3.1E-66 T 14-10-2018 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 734 1.2E-21 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 Gene3D G3DSA:1.10.1780.10 1 144 1.7E-41 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 SUPERFAMILY SSF52540 438 744 5.23E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 SMART SM00382 207 352 2.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 SMART SM00382 488 655 8.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 343 6.1E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 646 1.4E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 5.1E-15 T 14-10-2018 IPR004176 Clp, N-terminal AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 SUPERFAMILY SSF52540 169 431 1.62E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08375 2d55567746081fb5fdd68b3583383517 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 281 7.7E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 283 3.5E-126 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 79 92 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 PIRSF PIRSF000770 8 284 1.9E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 SUPERFAMILY SSF88946 14 124 6.28E-40 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 Pfam PF04545 Sigma-70, region 4 229 279 2.0E-14 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 Pfam PF04542 Sigma-70 region 2 55 124 1.4E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 Pfam PF00140 Sigma-70 factor, region 1.2 21 47 2.5E-5 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 SUPERFAMILY SSF88659 199 282 8.78E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 Gene3D G3DSA:1.10.601.10 7 124 5.3E-30 T 14-10-2018 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 8.0E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 PRINTS PR00046 Major sigma-70 factor signature 79 92 8.0E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 PRINTS PR00046 Major sigma-70 factor signature 233 245 8.0E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 8.0E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 52.234 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_16760 b357526d7efc056e9d6fe673b0526e64 284 Gene3D G3DSA:1.20.140.160 131 283 4.9E-15 T 14-10-2018 AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 2.6E-13 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 Gene3D G3DSA:2.30.30.30 1 64 2.0E-12 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 SMART SM01185 69 124 3.6E-15 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 Gene3D G3DSA:2.40.50.140 67 129 1.1E-13 T 14-10-2018 AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 PIRSF PIRSF005901 1 189 1.7E-61 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 SUPERFAMILY SSF50249 69 129 2.3E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 2.9E-17 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 Pfam PF09285 Elongation factor P, C-terminal 132 187 3.6E-22 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 40.963 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 SMART SM00841 132 187 3.6E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 SUPERFAMILY SSF50249 132 188 4.28E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 Gene3D G3DSA:2.40.50.140 131 188 1.4E-23 T 14-10-2018 AMBLS11_17195 68709622c7bc9b97347745f9e2b629c6 191 SUPERFAMILY SSF50104 1 65 1.3E-13 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMBLS11_13125 8a45193bfc24e45ad898a3fb03bcaf50 347 Gene3D G3DSA:3.40.50.2000 161 333 1.0E-50 T 14-10-2018 AMBLS11_13125 8a45193bfc24e45ad898a3fb03bcaf50 347 Gene3D G3DSA:3.40.50.2000 12 343 1.0E-50 T 14-10-2018 AMBLS11_13125 8a45193bfc24e45ad898a3fb03bcaf50 347 Pfam PF00534 Glycosyl transferases group 1 178 323 1.5E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_13125 8a45193bfc24e45ad898a3fb03bcaf50 347 SUPERFAMILY SSF53756 2 347 4.24E-58 T 14-10-2018 AMBLS11_13125 8a45193bfc24e45ad898a3fb03bcaf50 347 Pfam PF13439 Glycosyltransferase Family 4 12 161 9.6E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMBLS11_09940 f079a2861aba5afcc2f89295c0612aca 292 SUPERFAMILY SSF103481 69 149 2.35E-7 T 14-10-2018 AMBLS11_09940 f079a2861aba5afcc2f89295c0612aca 292 SUPERFAMILY SSF103481 213 289 1.57E-9 T 14-10-2018 AMBLS11_09940 f079a2861aba5afcc2f89295c0612aca 292 Pfam PF00892 EamA-like transporter family 5 145 1.1E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_09940 f079a2861aba5afcc2f89295c0612aca 292 Pfam PF00892 EamA-like transporter family 159 289 1.1E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_12115 045235e2332cc36dc6f4513a29b97e7d 151 SUPERFAMILY SSF54427 5 127 3.73E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_12115 045235e2332cc36dc6f4513a29b97e7d 151 Gene3D G3DSA:3.10.450.50 3 136 1.7E-15 T 14-10-2018 AMBLS11_12115 045235e2332cc36dc6f4513a29b97e7d 151 Pfam PF12680 SnoaL-like domain 19 118 4.9E-7 T 14-10-2018 IPR037401 SnoaL-like domain AMBLS11_04210 894ea4bb669431db9644aaf313be3c66 411 Pfam PF11871 Domain of unknown function (DUF3391) 5 71 6.5E-7 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 AMBLS11_04210 894ea4bb669431db9644aaf313be3c66 411 Pfam PF16537 Type II secretion system protein B 348 406 1.7E-23 T 14-10-2018 IPR032389 Type II secretion system protein B AMBLS11_13950 842de3b9f91a1c84fa644e0b4db91606 172 Pfam PF13975 gag-polyprotein putative aspartyl protease 69 157 3.0E-22 T 14-10-2018 AMBLS11_13950 842de3b9f91a1c84fa644e0b4db91606 172 Gene3D G3DSA:2.40.70.10 49 171 1.6E-30 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_13950 842de3b9f91a1c84fa644e0b4db91606 172 SUPERFAMILY SSF50630 58 161 1.35E-18 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_13950 842de3b9f91a1c84fa644e0b4db91606 172 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 55 170 1.6E-30 T 14-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal AMBLS11_13950 842de3b9f91a1c84fa644e0b4db91606 172 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 79 90 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMBLS11_03005 dd676d3a875fcd1953813f46cac0ff6f 469 Gene3D G3DSA:3.40.190.10 50 447 7.8E-140 T 14-10-2018 AMBLS11_03005 dd676d3a875fcd1953813f46cac0ff6f 469 SUPERFAMILY SSF53850 46 310 7.01E-18 T 14-10-2018 AMBLS11_03005 dd676d3a875fcd1953813f46cac0ff6f 469 Pfam PF13379 NMT1-like family 44 323 2.8E-105 T 14-10-2018 AMBLS11_03005 dd676d3a875fcd1953813f46cac0ff6f 469 Gene3D G3DSA:3.40.190.10 135 452 7.8E-140 T 14-10-2018 AMBLS11_14370 1915c9fe0b17bafd10c358f996a7b693 229 Gene3D G3DSA:3.90.190.10 58 211 2.0E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMBLS11_14370 1915c9fe0b17bafd10c358f996a7b693 229 SUPERFAMILY SSF52799 68 190 5.77E-11 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMBLS11_16010 be62b505c97a13f0b3ee4f230b41e16a 279 Gene3D G3DSA:2.60.120.330 1 279 4.9E-95 T 14-10-2018 IPR027443 Isopenicillin N synthase-like AMBLS11_16010 be62b505c97a13f0b3ee4f230b41e16a 279 SUPERFAMILY SSF51197 7 276 4.46E-62 T 14-10-2018 AMBLS11_16010 be62b505c97a13f0b3ee4f230b41e16a 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 13 94 4.5E-10 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain AMBLS11_16010 be62b505c97a13f0b3ee4f230b41e16a 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 1.5E-15 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMBLS11_03150 e2fb4ee493b52898a6175d4df5c0d5ae 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 7.1E-46 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMBLS11_03150 e2fb4ee493b52898a6175d4df5c0d5ae 200 SMART SM01207 10 185 8.5E-77 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMBLS11_03150 e2fb4ee493b52898a6175d4df5c0d5ae 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.592 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMBLS11_03150 e2fb4ee493b52898a6175d4df5c0d5ae 200 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 195 7.9E-64 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMBLS11_03445 41e1da1c102a4405253c6512ded67421 233 Gene3D G3DSA:1.25.40.10 27 227 9.9E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_03445 41e1da1c102a4405253c6512ded67421 233 SUPERFAMILY SSF48452 77 201 3.58E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 168 178 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 453 463 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 Pfam PF02225 PA domain 366 431 9.8E-8 T 14-10-2018 IPR003137 PA domain AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 PRINTS PR00723 Subtilisin serine protease family (S8) signature 126 145 2.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 PRINTS PR00723 Subtilisin serine protease family (S8) signature 452 468 2.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 PRINTS PR00723 Subtilisin serine protease family (S8) signature 164 177 2.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 SUPERFAMILY SSF52743 110 513 6.55E-79 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 Gene3D G3DSA:3.40.50.200 129 508 9.4E-115 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 Gene3D G3DSA:3.50.30.30 330 445 9.4E-115 T 14-10-2018 AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 Pfam PF00082 Subtilase family 443 503 7.5E-13 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 Pfam PF00082 Subtilase family 128 343 7.6E-24 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMBLS11_15780 43268d2862e507a711bfb3f6bc2342fc 615 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 131 142 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 145 2.2E-9 T 14-10-2018 IPR000014 PAS domain AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 SMART SM00091 21 86 4.5E-5 T 14-10-2018 IPR000014 PAS domain AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 Pfam PF13426 PAS domain 32 140 1.5E-7 T 14-10-2018 IPR000014 PAS domain AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 Gene3D G3DSA:3.30.450.20 18 142 1.7E-19 T 14-10-2018 AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 Gene3D G3DSA:3.30.70.270 143 318 1.9E-50 T 14-10-2018 AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 149 315 7.8E-46 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 SUPERFAMILY SSF55785 32 151 1.24E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 314 6.8E-47 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 SMART SM00267 142 318 3.8E-49 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_12035 295d85d0443575aebe08d69bdaf201c4 318 SUPERFAMILY SSF55073 158 317 3.14E-42 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_04385 018c01f43f3bdbd9d18fccfc645a7d59 314 Pfam PF04333 MlaA lipoprotein 50 240 2.6E-67 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMBLS11_04385 018c01f43f3bdbd9d18fccfc645a7d59 314 PRINTS PR01805 VacJ lipoprotein signature 69 85 1.1E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMBLS11_04385 018c01f43f3bdbd9d18fccfc645a7d59 314 PRINTS PR01805 VacJ lipoprotein signature 156 173 1.1E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMBLS11_04385 018c01f43f3bdbd9d18fccfc645a7d59 314 PRINTS PR01805 VacJ lipoprotein signature 120 137 1.1E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMBLS11_04385 018c01f43f3bdbd9d18fccfc645a7d59 314 PRINTS PR01805 VacJ lipoprotein signature 51 64 1.1E-22 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AMBLS11_08550 70f5416629f92d6f8947aa223182505c 247 Pfam PF00121 Triosephosphate isomerase 9 243 6.7E-83 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_08550 70f5416629f92d6f8947aa223182505c 247 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 245 56.96 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_08550 70f5416629f92d6f8947aa223182505c 247 SUPERFAMILY SSF51351 5 245 4.06E-87 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_08550 70f5416629f92d6f8947aa223182505c 247 Gene3D G3DSA:3.20.20.70 1 247 3.1E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_08550 70f5416629f92d6f8947aa223182505c 247 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 9 237 9.3E-59 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_08550 70f5416629f92d6f8947aa223182505c 247 ProSitePatterns PS00171 Triosephosphate isomerase active site. 162 172 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_06910 87162df2996c6c9354e505d28f000b3f 521 Pfam PF00072 Response regulator receiver domain 24 134 2.9E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06910 87162df2996c6c9354e505d28f000b3f 521 SUPERFAMILY SSF109604 349 505 4.71E-30 T 14-10-2018 AMBLS11_06910 87162df2996c6c9354e505d28f000b3f 521 SUPERFAMILY SSF52172 17 152 2.56E-13 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_06910 87162df2996c6c9354e505d28f000b3f 521 SMART SM00448 22 144 0.0077 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06910 87162df2996c6c9354e505d28f000b3f 521 Pfam PF11849 Domain of unknown function (DUF3369) 144 319 4.1E-46 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 AMBLS11_06910 87162df2996c6c9354e505d28f000b3f 521 Pfam PF13487 HD domain 397 458 7.1E-17 T 14-10-2018 AMBLS11_06910 87162df2996c6c9354e505d28f000b3f 521 Gene3D G3DSA:3.40.50.2300 22 168 8.8E-15 T 14-10-2018 AMBLS11_06910 87162df2996c6c9354e505d28f000b3f 521 Gene3D G3DSA:1.10.3210.10 319 521 8.2E-59 T 14-10-2018 AMBLS11_01430 a3cc7422367cc5e463b25dcb3f7d89b3 292 Gene3D G3DSA:1.20.1510.10 10 200 2.2E-38 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMBLS11_01430 a3cc7422367cc5e463b25dcb3f7d89b3 292 SUPERFAMILY SSF161111 7 202 1.07E-45 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMBLS11_01430 a3cc7422367cc5e463b25dcb3f7d89b3 292 Pfam PF01545 Cation efflux family 15 197 2.9E-39 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMBLS11_01430 a3cc7422367cc5e463b25dcb3f7d89b3 292 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 248 5.7E-52 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.7E-27 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 1.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 SMART SM00387 316 428 1.7E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 423 1.9E-137 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 SUPERFAMILY SSF55874 260 424 1.7E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 SMART SM00388 205 271 1.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 270 1.2E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 Gene3D G3DSA:1.10.287.130 202 271 3.8E-24 T 14-10-2018 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 SUPERFAMILY SSF55785 90 197 6.07E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 SUPERFAMILY SSF47384 192 270 2.75E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 427 9.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 Gene3D G3DSA:3.30.565.10 275 430 4.3E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03210 03b026e8a2a3bc5a5d3f4fa0e22f2d0f 433 Gene3D G3DSA:3.30.450.20 86 201 5.7E-5 T 14-10-2018 AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Gene3D G3DSA:2.120.10.30 413 627 1.6E-21 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Gene3D G3DSA:2.120.10.30 198 372 7.8E-16 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 SUPERFAMILY SSF82171 147 579 2.35E-50 T 14-10-2018 AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Gene3D G3DSA:2.120.10.60 56 194 3.2E-22 T 14-10-2018 AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 SUPERFAMILY SSF51338 676 1066 1.79E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Gene3D G3DSA:3.30.110.90 735 1028 6.6E-42 T 14-10-2018 AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Gene3D G3DSA:1.20.58.520 910 1005 6.6E-42 T 14-10-2018 AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Gene3D G3DSA:2.30.40.10 683 1061 6.6E-42 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 202 218 0.0088 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 411 434 0.0023 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 263 279 0.014 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 456 485 0.0011 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 95 129 5.2E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 SUPERFAMILY SSF51556 734 1029 2.27E-39 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Pfam PF01979 Amidohydrolase family 957 1064 5.7E-14 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 SUPERFAMILY SSF82171 30 221 4.71E-26 T 14-10-2018 AMBLS11_16630 e038c51f171a1add8215b30cb956885c 1111 Gene3D G3DSA:3.40.50.10910 801 909 6.6E-42 T 14-10-2018 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 6.6E-169 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 405 1.7E-32 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 40.652 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 SUPERFAMILY SSF55681 116 428 1.35E-99 T 14-10-2018 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 Gene3D G3DSA:3.30.930.10 105 433 1.8E-113 T 14-10-2018 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 1.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 1.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 1.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 1.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 1.8E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 PIRSF PIRSF001529 1 431 1.2E-177 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 SUPERFAMILY SSF46589 1 112 1.05E-29 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 Gene3D G3DSA:1.10.287.40 1 104 1.4E-18 T 14-10-2018 AMBLS11_09815 95c7042de695d2931def9e3f768d5f34 433 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 6.5E-30 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AMBLS11_12545 4dfdffbe11bdc833bbc06ad08b0756f4 192 SUPERFAMILY SSF88659 124 186 3.55E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_12545 4dfdffbe11bdc833bbc06ad08b0756f4 192 Pfam PF08281 Sigma-70, region 4 135 181 4.3E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_12545 4dfdffbe11bdc833bbc06ad08b0756f4 192 Gene3D G3DSA:1.10.10.10 122 191 2.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_12545 4dfdffbe11bdc833bbc06ad08b0756f4 192 Gene3D G3DSA:1.10.1740.10 1 121 3.6E-44 T 14-10-2018 AMBLS11_12545 4dfdffbe11bdc833bbc06ad08b0756f4 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 3.2E-98 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_12545 4dfdffbe11bdc833bbc06ad08b0756f4 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 184 2.5E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_12545 4dfdffbe11bdc833bbc06ad08b0756f4 192 Pfam PF04542 Sigma-70 region 2 25 92 1.9E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_12545 4dfdffbe11bdc833bbc06ad08b0756f4 192 SUPERFAMILY SSF88946 2 108 1.04E-31 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_13065 c1f1fec0d80e18a505d0973448acff1f 731 Gene3D G3DSA:1.20.1220.12 588 731 1.1E-69 T 14-10-2018 AMBLS11_13065 c1f1fec0d80e18a505d0973448acff1f 731 Pfam PF01274 Malate synthase 18 702 2.3E-158 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMBLS11_13065 c1f1fec0d80e18a505d0973448acff1f 731 Gene3D G3DSA:2.170.170.11 133 262 3.3E-257 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMBLS11_13065 c1f1fec0d80e18a505d0973448acff1f 731 Hamap MF_00641 Malate synthase G [glcB]. 1 731 362.874 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMBLS11_13065 c1f1fec0d80e18a505d0973448acff1f 731 SUPERFAMILY SSF51645 3 727 8.89E-280 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMBLS11_13065 c1f1fec0d80e18a505d0973448acff1f 731 Gene3D G3DSA:3.20.20.360 10 585 3.3E-257 T 14-10-2018 AMBLS11_13065 c1f1fec0d80e18a505d0973448acff1f 731 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 727 0.0 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMBLS11_06970 aca515e2cb09efe9686fe3abf7670de3 688 Gene3D G3DSA:3.10.620.30 366 512 6.3E-20 T 14-10-2018 AMBLS11_06970 aca515e2cb09efe9686fe3abf7670de3 688 SMART SM00460 430 499 3.5E-18 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_06970 aca515e2cb09efe9686fe3abf7670de3 688 Pfam PF01841 Transglutaminase-like superfamily 385 497 1.6E-19 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_06970 aca515e2cb09efe9686fe3abf7670de3 688 SUPERFAMILY SSF54001 300 617 1.68E-46 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMBLS11_06970 aca515e2cb09efe9686fe3abf7670de3 688 Pfam PF11992 Domain of unknown function (DUF3488) 28 354 3.6E-69 T 14-10-2018 IPR021878 Protein of unknown function DUF3488 AMBLS11_10925 c9256e0e861ab7e54abc99ebe354695c 318 SUPERFAMILY SSF46689 211 261 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_10925 c9256e0e861ab7e54abc99ebe354695c 318 Gene3D G3DSA:3.40.50.880 3 209 5.8E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_10925 c9256e0e861ab7e54abc99ebe354695c 318 SUPERFAMILY SSF52317 5 191 9.9E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_10925 c9256e0e861ab7e54abc99ebe354695c 318 Pfam PF01965 DJ-1/PfpI family 5 172 7.0E-21 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMBLS11_10925 c9256e0e861ab7e54abc99ebe354695c 318 SUPERFAMILY SSF46689 264 314 2.55E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_10925 c9256e0e861ab7e54abc99ebe354695c 318 Pfam PF12833 Helix-turn-helix domain 235 312 6.7E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_10925 c9256e0e861ab7e54abc99ebe354695c 318 SMART SM00342 228 311 9.2E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_10925 c9256e0e861ab7e54abc99ebe354695c 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 265 307 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMBLS11_10925 c9256e0e861ab7e54abc99ebe354695c 318 Gene3D G3DSA:1.10.10.60 210 314 2.4E-27 T 14-10-2018 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 SMART SM00830 34 114 7.3E-27 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 31 112 6.5E-25 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 SUPERFAMILY SSF55021 304 401 1.79E-26 T 14-10-2018 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 349 356 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 Gene3D G3DSA:3.30.70.260 315 403 4.5E-27 T 14-10-2018 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 SUPERFAMILY SSF53850 129 314 1.74E-50 T 14-10-2018 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 PIRSF PIRSF001500 23 404 1.0E-127 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 Gene3D G3DSA:3.40.190.10 133 307 5.8E-49 T 14-10-2018 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 Gene3D G3DSA:3.40.190.10 213 298 5.8E-49 T 14-10-2018 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 Pfam PF01817 Chorismate mutase type II 34 111 1.1E-18 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 Pfam PF00800 Prephenate dehydratase 130 311 3.6E-55 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 SUPERFAMILY SSF48600 29 115 1.18E-22 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMBLS11_06040 24017664bfc8f03c6a13b2221360ee13 417 Gene3D G3DSA:1.20.59.10 25 132 6.3E-32 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 3.2E-138 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 SUPERFAMILY SSF55931 102 468 9.81E-137 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 SMART SM01230 102 379 9.1E-153 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 SUPERFAMILY SSF54368 3 100 1.44E-33 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 Gene3D G3DSA:3.30.590.10 105 457 4.5E-148 T 14-10-2018 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 Gene3D G3DSA:3.10.20.70 2 104 3.6E-38 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 95 3.2E-29 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMBLS11_14840 cc518f6f545db4955278595883a0f313 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 4.0E-210 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMBLS11_09110 648bcec6fa6e5942356324c7bf3b046f 603 Gene3D G3DSA:2.60.40.3650 4 187 8.3E-53 T 14-10-2018 AMBLS11_09110 648bcec6fa6e5942356324c7bf3b046f 603 Pfam PF05299 M61 glycyl aminopeptidase 284 400 5.2E-44 T 14-10-2018 IPR007963 Peptidase M61, catalytic domain AMBLS11_09110 648bcec6fa6e5942356324c7bf3b046f 603 SUPERFAMILY SSF50156 502 581 1.45E-9 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMBLS11_09110 648bcec6fa6e5942356324c7bf3b046f 603 Pfam PF13180 PDZ domain 503 579 5.2E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_09110 648bcec6fa6e5942356324c7bf3b046f 603 PIRSF PIRSF016493 1 603 4.8E-178 T 14-10-2018 IPR024191 Peptidase M61 AMBLS11_09110 648bcec6fa6e5942356324c7bf3b046f 603 Gene3D G3DSA:1.10.390.60 190 465 5.6E-98 T 14-10-2018 AMBLS11_09110 648bcec6fa6e5942356324c7bf3b046f 603 Gene3D G3DSA:2.30.42.10 502 603 7.6E-16 T 14-10-2018 AMBLS11_09110 648bcec6fa6e5942356324c7bf3b046f 603 SMART SM00228 502 570 6.2E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_09110 648bcec6fa6e5942356324c7bf3b046f 603 SUPERFAMILY SSF55486 194 432 2.05E-11 T 14-10-2018 AMBLS11_07350 e2b68da2052329e0941e3e885711d05d 738 Pfam PF13614 AAA domain 553 694 6.7E-10 T 14-10-2018 IPR025669 AAA domain AMBLS11_07350 e2b68da2052329e0941e3e885711d05d 738 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 719 5.7E-44 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AMBLS11_07350 e2b68da2052329e0941e3e885711d05d 738 SUPERFAMILY SSF52540 542 729 4.61E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_07350 e2b68da2052329e0941e3e885711d05d 738 Pfam PF02706 Chain length determinant protein 17 108 4.7E-11 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AMBLS11_07350 e2b68da2052329e0941e3e885711d05d 738 Gene3D G3DSA:3.40.50.300 465 737 1.2E-67 T 14-10-2018 AMBLS11_07350 e2b68da2052329e0941e3e885711d05d 738 Pfam PF13807 G-rich domain on putative tyrosine kinase 400 470 6.5E-8 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 SMART SM00382 161 304 2.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 Gene3D G3DSA:3.40.50.300 126 312 3.3E-67 T 14-10-2018 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 1.1E-228 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 Pfam PF02954 Bacterial regulatory protein, Fis family 429 466 1.3E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 Pfam PF00158 Sigma-54 interaction domain 141 307 5.3E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 6.1E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 6.1E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 Gene3D G3DSA:3.40.50.2300 1 125 1.7E-36 T 14-10-2018 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 Gene3D G3DSA:1.10.8.60 313 384 6.0E-22 T 14-10-2018 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 SUPERFAMILY SSF52540 140 384 2.58E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 SUPERFAMILY SSF46689 381 468 6.09E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 SUPERFAMILY SSF52172 1 186 9.39E-41 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 Pfam PF00072 Response regulator receiver domain 6 114 8.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 SMART SM00448 4 116 1.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14855 1466f0dca1ace958c73a6495d15f18b4 469 Gene3D G3DSA:1.10.10.60 385 468 1.8E-23 T 14-10-2018 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 SUPERFAMILY SSF54719 84 192 3.27E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 SUPERFAMILY SSF46609 1 84 3.14E-36 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.2E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 3.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.0E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 Gene3D G3DSA:1.10.287.990 20 82 9.9E-27 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 4.4E-37 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 PIRSF PIRSF000349 1 193 7.6E-84 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 Gene3D G3DSA:2.40.500.20 83 193 1.8E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_05615 337a09ca38367996ed5e0662695f2f92 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMBLS11_09830 4916f0beb0a50c5021da82a4521d0e3e 254 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 52 254 1.3E-27 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AMBLS11_09830 4916f0beb0a50c5021da82a4521d0e3e 254 SUPERFAMILY SSF89392 67 254 2.12E-39 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMBLS11_09830 4916f0beb0a50c5021da82a4521d0e3e 254 Gene3D G3DSA:2.50.20.10 63 254 7.4E-36 T 14-10-2018 AMBLS11_09830 4916f0beb0a50c5021da82a4521d0e3e 254 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 74 242 3.8E-38 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AMBLS11_09830 4916f0beb0a50c5021da82a4521d0e3e 254 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 49 253 23.748 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AMBLS11_14755 5ea051cec71bb34dc5418e0420cb4071 86 SUPERFAMILY SSF55229 34 84 2.88E-16 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AMBLS11_14755 5ea051cec71bb34dc5418e0420cb4071 86 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 7.0E-29 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AMBLS11_14755 5ea051cec71bb34dc5418e0420cb4071 86 Gene3D G3DSA:3.30.1070.10 1 83 1.1E-30 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AMBLS11_14755 5ea051cec71bb34dc5418e0420cb4071 86 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 19.018 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AMBLS11_14755 5ea051cec71bb34dc5418e0420cb4071 86 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 4.5E-26 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 Pfam PF00702 haloacid dehalogenase-like hydrolase 462 679 3.6E-42 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 684 1.0E-27 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 700 1.0E-27 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 314 328 1.0E-27 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 612 622 1.0E-27 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 601 1.0E-27 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 466 480 1.0E-27 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 468 474 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 Gene3D G3DSA:3.30.70.100 43 106 2.3E-16 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 197 774 1.6E-188 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 Gene3D G3DSA:3.40.50.1000 447 717 1.4E-93 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 Pfam PF00122 E1-E2 ATPase 265 445 5.1E-56 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 SUPERFAMILY SSF81653 268 364 4.71E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 Gene3D G3DSA:3.40.1110.10 477 597 1.4E-93 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00943 Copper-transporting ATPase signature 182 201 4.5E-10 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00943 Copper-transporting ATPase signature 642 659 4.5E-10 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00943 Copper-transporting ATPase signature 449 464 4.5E-10 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00943 Copper-transporting ATPase signature 83 103 4.5E-10 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00943 Copper-transporting ATPase signature 387 401 4.5E-10 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 PRINTS PR00943 Copper-transporting ATPase signature 254 272 4.5E-10 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 Pfam PF00403 Heavy-metal-associated domain 45 101 2.3E-13 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 SUPERFAMILY SSF81665 213 746 2.48E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 SUPERFAMILY SSF55008 42 109 2.75E-16 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 179 775 2.3E-185 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 Gene3D G3DSA:2.70.150.20 257 369 7.2E-41 T 14-10-2018 AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 SUPERFAMILY SSF56784 466 771 5.22E-59 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_01350 f85a53a55cc0353737fa4e721cc2ffce 782 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 237 744 2.3E-91 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMBLS11_01345 b50c379eb82e2854340cad033a335ac1 136 SMART SM00422 1 69 4.4E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_01345 b50c379eb82e2854340cad033a335ac1 136 SUPERFAMILY SSF46955 1 114 2.45E-27 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_01345 b50c379eb82e2854340cad033a335ac1 136 Gene3D G3DSA:1.10.1660.10 1 122 1.9E-28 T 14-10-2018 AMBLS11_01345 b50c379eb82e2854340cad033a335ac1 136 Pfam PF00376 MerR family regulatory protein 3 38 6.6E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_01345 b50c379eb82e2854340cad033a335ac1 136 Pfam PF09278 MerR, DNA binding 43 105 2.2E-16 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding AMBLS11_01345 b50c379eb82e2854340cad033a335ac1 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 2.8E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_01345 b50c379eb82e2854340cad033a335ac1 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.8E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 Pfam PF01433 Peptidase family M1 domain 260 470 5.2E-52 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 SMART SM01263 503 642 3.2E-50 T 14-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 Gene3D G3DSA:1.10.390.10 348 502 2.6E-50 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 Gene3D G3DSA:1.25.40.320 503 642 1.0E-49 T 14-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 Gene3D G3DSA:1.10.1740.60 251 347 3.4E-42 T 14-10-2018 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 Gene3D G3DSA:2.60.40.1730 68 250 2.2E-64 T 14-10-2018 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 SUPERFAMILY SSF48371 503 636 1.04E-38 T 14-10-2018 IPR016024 Armadillo-type fold AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 531 636 2.4E-25 T 14-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 SUPERFAMILY SSF63737 57 251 1.18E-45 T 14-10-2018 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 SUPERFAMILY SSF55486 258 495 3.17E-67 T 14-10-2018 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 234 249 2.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 335 350 2.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 308 318 2.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 354 366 2.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_03925 59fd4fdedc56808d7ff9ba6ccd98d26b 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 189 204 2.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_01420 3c2ea4a09e7fac17676cb6d7525df6c7 393 Gene3D G3DSA:2.40.50.100 168 201 8.0E-10 T 14-10-2018 AMBLS11_01420 3c2ea4a09e7fac17676cb6d7525df6c7 393 Gene3D G3DSA:2.40.420.20 314 393 7.7E-10 T 14-10-2018 AMBLS11_01420 3c2ea4a09e7fac17676cb6d7525df6c7 393 Pfam PF13533 Biotin-lipoyl like 170 203 3.9E-5 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMBLS11_01420 3c2ea4a09e7fac17676cb6d7525df6c7 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 204 277 1.1E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_01420 3c2ea4a09e7fac17676cb6d7525df6c7 393 Gene3D G3DSA:2.40.30.170 154 167 8.0E-10 T 14-10-2018 AMBLS11_01420 3c2ea4a09e7fac17676cb6d7525df6c7 393 Gene3D G3DSA:2.40.50.100 205 239 1.2E-10 T 14-10-2018 AMBLS11_01420 3c2ea4a09e7fac17676cb6d7525df6c7 393 SUPERFAMILY SSF51230 173 234 8.24E-9 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_01420 3c2ea4a09e7fac17676cb6d7525df6c7 393 Gene3D G3DSA:2.40.420.20 142 153 8.0E-10 T 14-10-2018 AMBLS11_01420 3c2ea4a09e7fac17676cb6d7525df6c7 393 Gene3D G3DSA:2.40.30.170 240 308 1.2E-10 T 14-10-2018 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 SUPERFAMILY SSF52172 513 631 3.42E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 SUPERFAMILY SSF47384 244 323 3.53E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 SUPERFAMILY SSF158472 200 249 1.7E-6 T 14-10-2018 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 Gene3D G3DSA:1.10.8.500 199 247 8.0E-6 T 14-10-2018 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 SMART SM00448 514 628 1.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 SUPERFAMILY SSF55874 312 484 1.03E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 SMART SM00304 198 250 4.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 Gene3D G3DSA:3.40.50.2300 494 633 6.3E-37 T 14-10-2018 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 Pfam PF00072 Response regulator receiver domain 516 627 3.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 Gene3D G3DSA:3.30.565.10 324 493 9.9E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 SMART SM00387 370 489 1.3E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 486 6.1E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 Gene3D G3DSA:1.10.287.130 248 323 5.8E-24 T 14-10-2018 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 SMART SM00388 258 323 1.8E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 3.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 3.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 442 3.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 3.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17760 07011e1bc2ed3c0da00f8f59ddd50140 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 323 1.2E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_14375 4148eb13b90054f8e842c2074a77af38 85 Gene3D G3DSA:1.10.10.10 1 81 5.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_14375 4148eb13b90054f8e842c2074a77af38 85 SMART SM00418 1 63 1.7E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_14375 4148eb13b90054f8e842c2074a77af38 85 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 9 27 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AMBLS11_14375 4148eb13b90054f8e842c2074a77af38 85 SUPERFAMILY SSF46785 2 62 6.71E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_14375 4148eb13b90054f8e842c2074a77af38 85 Pfam PF01022 Bacterial regulatory protein, arsR family 5 37 8.1E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_14375 4148eb13b90054f8e842c2074a77af38 85 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 18 2.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_14375 4148eb13b90054f8e842c2074a77af38 85 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 2.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_14375 4148eb13b90054f8e842c2074a77af38 85 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 50 2.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 SUPERFAMILY SSF47384 298 381 4.71E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 SMART SM00387 430 543 3.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 Gene3D G3DSA:1.10.287.130 280 380 2.8E-19 T 14-10-2018 AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 485 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 540 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 499 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 520 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 SUPERFAMILY SSF55874 391 542 3.27E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 432 540 3.6E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 Gene3D G3DSA:3.30.565.10 381 542 3.3E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_01070 a345980ce6672561ce9418f12f38d50e 548 Pfam PF00512 His Kinase A (phospho-acceptor) domain 304 379 4.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 Gene3D G3DSA:1.10.10.1800 459 550 5.9E-30 T 14-10-2018 AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 SUPERFAMILY SSF51905 7 261 3.4E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 Gene3D G3DSA:3.50.50.60 1 220 4.9E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 Gene3D G3DSA:3.50.50.60 304 458 2.1E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 SMART SM01228 546 617 8.3E-43 T 14-10-2018 AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.933 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.3E-283 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 Pfam PF01134 Glucose inhibited division protein A 8 399 3.3E-168 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 Gene3D G3DSA:1.10.150.570 570 622 4.1E-23 T 14-10-2018 AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AMBLS11_18985 b3ecd0755352f634f1bd3f542911a214 633 Pfam PF13932 GidA associated domain 401 616 6.9E-75 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AMBLS11_01660 c879512b55f669041d13e7b7e010c9db 405 SUPERFAMILY SSF103473 3 400 1.96E-38 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_01660 c879512b55f669041d13e7b7e010c9db 405 Gene3D G3DSA:1.20.1250.20 3 193 2.2E-16 T 14-10-2018 AMBLS11_01660 c879512b55f669041d13e7b7e010c9db 405 Gene3D G3DSA:1.20.1250.20 203 404 1.5E-32 T 14-10-2018 AMBLS11_01660 c879512b55f669041d13e7b7e010c9db 405 Pfam PF03825 Nucleoside H+ symporter 2 399 1.2E-123 T 14-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 AMBLS11_03680 073d1f7135b377fe154d572db5e14a1c 240 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 236 5.7E-63 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_03680 073d1f7135b377fe154d572db5e14a1c 240 Gene3D G3DSA:3.30.70.980 127 204 1.3E-46 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_03680 073d1f7135b377fe154d572db5e14a1c 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.509 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_03680 073d1f7135b377fe154d572db5e14a1c 240 SUPERFAMILY SSF75625 1 236 1.96E-78 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_03680 073d1f7135b377fe154d572db5e14a1c 240 Gene3D G3DSA:1.10.10.200 17 78 9.8E-19 T 14-10-2018 IPR017856 Integrase-like, N-terminal AMBLS11_03680 073d1f7135b377fe154d572db5e14a1c 240 Gene3D G3DSA:3.30.70.980 83 235 1.3E-46 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_03680 073d1f7135b377fe154d572db5e14a1c 240 Pfam PF01709 Transcriptional regulator 5 236 3.7E-77 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_19000 0044733f748c6b57fb3710924ea77377 145 SUPERFAMILY SSF52218 5 141 4.4E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_19000 0044733f748c6b57fb3710924ea77377 145 Gene3D G3DSA:3.40.50.360 3 144 6.4E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_19000 0044733f748c6b57fb3710924ea77377 145 Pfam PF00258 Flavodoxin 7 137 3.6E-22 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 Pfam PF11791 Aconitate B N-terminal domain 6 163 5.8E-43 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 Gene3D G3DSA:3.30.499.10 732 820 1.4E-8 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 Gene3D G3DSA:3.30.499.10 833 921 1.5E-17 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 SUPERFAMILY SSF74778 3 167 7.32E-42 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 Pfam PF00330 Aconitase family (aconitate hydratase) 411 894 2.1E-62 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 SUPERFAMILY SSF53732 402 914 7.98E-74 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 Gene3D G3DSA:3.20.19.10 169 385 1.0E-32 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 SUPERFAMILY SSF52016 169 394 2.55E-31 T 14-10-2018 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 Gene3D G3DSA:3.40.1060.10 425 717 3.6E-115 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 Gene3D G3DSA:3.30.499.10 430 567 3.6E-115 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 Pfam PF06434 Aconitate hydratase 2 N-terminus 177 406 2.0E-62 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_03295 2139f8ac050c4a61434e35b6e6b608b8 936 Gene3D G3DSA:1.25.40.310 3 168 1.2E-49 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 PIRSF PIRSF039144 1 112 4.9E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 Gene3D G3DSA:3.30.70.120 1 112 8.8E-47 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 SMART SM00938 4 105 5.9E-66 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 SUPERFAMILY SSF54913 1 112 5.72E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMBLS11_01870 7941d919c1085f14ddf1ffa16bf6baff 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.2E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_17530 8a75d46b4c6065a9db62e4936251a64d 333 SMART SM00354 1 71 1.6E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_17530 8a75d46b4c6065a9db62e4936251a64d 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.9E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_17530 8a75d46b4c6065a9db62e4936251a64d 333 SUPERFAMILY SSF47413 1 60 2.82E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_17530 8a75d46b4c6065a9db62e4936251a64d 333 Gene3D G3DSA:3.40.50.2300 56 305 9.4E-75 T 14-10-2018 AMBLS11_17530 8a75d46b4c6065a9db62e4936251a64d 333 Pfam PF13377 Periplasmic binding protein-like domain 172 329 2.0E-31 T 14-10-2018 AMBLS11_17530 8a75d46b4c6065a9db62e4936251a64d 333 SUPERFAMILY SSF53822 61 331 4.12E-78 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_17530 8a75d46b4c6065a9db62e4936251a64d 333 Gene3D G3DSA:1.10.260.40 1 55 4.9E-23 T 14-10-2018 AMBLS11_17530 8a75d46b4c6065a9db62e4936251a64d 333 Gene3D G3DSA:3.40.50.2300 160 289 9.4E-75 T 14-10-2018 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 SUPERFAMILY SSF47005 256 297 1.31E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 SUPERFAMILY SSF51230 119 210 1.96E-24 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 Gene3D G3DSA:3.30.559.10 317 562 1.8E-81 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 144 173 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 Pfam PF02817 e3 binding domain 259 294 4.8E-17 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 Gene3D G3DSA:2.40.50.100 2 105 2.3E-22 T 14-10-2018 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 Gene3D G3DSA:2.40.50.100 113 217 4.6E-22 T 14-10-2018 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 333 562 1.3E-78 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 Pfam PF00364 Biotin-requiring enzyme 4 75 2.0E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 Pfam PF00364 Biotin-requiring enzyme 121 192 2.0E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 SUPERFAMILY SSF51230 1 88 1.31E-24 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 SUPERFAMILY SSF52777 326 562 7.56E-72 T 14-10-2018 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMBLS11_09285 2ff1265bacfe03ef1a1d8cb836b92f95 565 Gene3D G3DSA:4.10.320.10 251 298 8.8E-18 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMBLS11_01595 f67ef37ed94bec07630ae461a39f79b9 344 SUPERFAMILY SSF47413 9 67 5.46E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_01595 f67ef37ed94bec07630ae461a39f79b9 344 SUPERFAMILY SSF53822 83 341 2.54E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_01595 f67ef37ed94bec07630ae461a39f79b9 344 Gene3D G3DSA:1.10.260.40 2 66 3.7E-15 T 14-10-2018 AMBLS11_01595 f67ef37ed94bec07630ae461a39f79b9 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 1.5E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_01595 f67ef37ed94bec07630ae461a39f79b9 344 Gene3D G3DSA:3.40.50.2300 172 337 1.5E-60 T 14-10-2018 AMBLS11_01595 f67ef37ed94bec07630ae461a39f79b9 344 Pfam PF13377 Periplasmic binding protein-like domain 181 340 8.0E-33 T 14-10-2018 AMBLS11_01595 f67ef37ed94bec07630ae461a39f79b9 344 Gene3D G3DSA:3.40.50.2300 86 332 1.5E-60 T 14-10-2018 AMBLS11_01595 f67ef37ed94bec07630ae461a39f79b9 344 SMART SM00354 9 79 1.9E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 1.0E-30 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 Gene3D G3DSA:3.40.50.20 2 95 1.0E-35 T 14-10-2018 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 SUPERFAMILY SSF52440 1 103 4.17E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 SUPERFAMILY SSF56059 104 324 6.01E-68 T 14-10-2018 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 SUPERFAMILY SSF51246 329 424 3.77E-33 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 Gene3D G3DSA:3.90.600.10 330 430 2.4E-34 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 Gene3D G3DSA:3.30.470.20 191 329 1.3E-59 T 14-10-2018 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.765 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 Gene3D G3DSA:3.30.1490.20 121 190 3.1E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.4E-84 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 SMART SM01209 103 296 2.9E-140 T 14-10-2018 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 9.0E-34 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 SMART SM01210 330 423 4.6E-55 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_18165 323c744132533d8115edba5ac03e5a38 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 7.0E-182 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMBLS11_03920 34a9be77e15443ba1eaaf296936fa9bd 142 SUPERFAMILY SSF82784 8 140 8.11E-43 T 14-10-2018 IPR036102 OsmC/Ohr superfamily AMBLS11_03920 34a9be77e15443ba1eaaf296936fa9bd 142 Pfam PF02566 OsmC-like protein 44 139 9.2E-21 T 14-10-2018 IPR003718 OsmC/Ohr family AMBLS11_03920 34a9be77e15443ba1eaaf296936fa9bd 142 Gene3D G3DSA:2.20.25.10 1 48 8.5E-22 T 14-10-2018 AMBLS11_03920 34a9be77e15443ba1eaaf296936fa9bd 142 Gene3D G3DSA:3.30.300.20 49 141 1.7E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMBLS11_03920 34a9be77e15443ba1eaaf296936fa9bd 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 140 3.0E-55 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 2.3E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 2.3E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 2.3E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 2.3E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 2.3E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 2.3E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 Gene3D G3DSA:3.40.50.620 7 377 2.3E-154 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 SUPERFAMILY SSF57770 141 175 8.63E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 541 675 2.2E-44 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 SUPERFAMILY SSF50249 569 674 7.1E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 SUPERFAMILY SSF52374 4 385 2.31E-103 T 14-10-2018 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 533 4.0E-182 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 Pfam PF01588 Putative tRNA binding domain 580 672 2.4E-24 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 543 40.393 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 Gene3D G3DSA:2.20.28.20 141 175 2.3E-154 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 Gene3D G3DSA:2.40.50.140 564 675 6.2E-34 T 14-10-2018 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 SUPERFAMILY SSF47323 388 545 8.22E-45 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 Gene3D G3DSA:1.10.730.10 378 534 1.8E-34 T 14-10-2018 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 Pfam PF09334 tRNA synthetases class I (M) 7 394 2.2E-155 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_11325 c34fc2469d41ab056553393490b1e2d2 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_16530 9546e0071031f0a98d5256bedbcede03 185 Pfam PF12802 MarR family 22 72 8.6E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_16530 9546e0071031f0a98d5256bedbcede03 185 SUPERFAMILY SSF46785 6 145 5.77E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_16530 9546e0071031f0a98d5256bedbcede03 185 Gene3D G3DSA:1.10.10.10 6 84 4.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_16530 9546e0071031f0a98d5256bedbcede03 185 PIRSF PIRSF006707 1 176 8.9E-47 T 14-10-2018 IPR026282 DNA-binding protein, MJ1563 type AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 SUPERFAMILY SSF51984 1 90 1.2E-23 T 14-10-2018 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 447 58.563 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 Pfam PF08245 Mur ligase middle domain 109 289 2.0E-21 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 Gene3D G3DSA:3.90.190.20 312 448 1.9E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 Gene3D G3DSA:3.40.50.720 1 90 4.9E-34 T 14-10-2018 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 Pfam PF01225 Mur ligase family, catalytic domain 2 95 3.4E-16 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 SUPERFAMILY SSF53623 94 306 3.14E-50 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 SUPERFAMILY SSF53244 309 446 1.96E-40 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 357 8.9E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 447 6.9E-229 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AMBLS11_00830 27a22cf0c0e3e44fae73d0cebe367c7a 452 Gene3D G3DSA:3.40.1190.10 91 311 5.7E-55 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_06865 e5538a0154b708629dac4c7001ad309f 333 SMART SM00829 12 331 3.6E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_06865 e5538a0154b708629dac4c7001ad309f 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 134 4.4E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_06865 e5538a0154b708629dac4c7001ad309f 333 Pfam PF00107 Zinc-binding dehydrogenase 175 297 8.7E-24 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMBLS11_06865 e5538a0154b708629dac4c7001ad309f 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 168 195 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMBLS11_06865 e5538a0154b708629dac4c7001ad309f 333 Gene3D G3DSA:3.90.180.10 11 331 1.7E-123 T 14-10-2018 AMBLS11_06865 e5538a0154b708629dac4c7001ad309f 333 SUPERFAMILY SSF50129 4 162 1.27E-46 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_06865 e5538a0154b708629dac4c7001ad309f 333 Gene3D G3DSA:3.40.50.720 149 303 1.7E-123 T 14-10-2018 AMBLS11_06865 e5538a0154b708629dac4c7001ad309f 333 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMBLS11_06865 e5538a0154b708629dac4c7001ad309f 333 SUPERFAMILY SSF51735 139 301 1.97E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 PRINTS PR00688 Xylose isomerase signature 271 298 1.9E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 PRINTS PR00688 Xylose isomerase signature 300 311 1.9E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 PRINTS PR00688 Xylose isomerase signature 133 153 1.9E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 PRINTS PR00688 Xylose isomerase signature 156 175 1.9E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 PRINTS PR00688 Xylose isomerase signature 207 226 1.9E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 PRINTS PR00688 Xylose isomerase signature 92 114 1.9E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 PRINTS PR00688 Xylose isomerase signature 229 253 1.9E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 PRINTS PR00688 Xylose isomerase signature 333 344 1.9E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 PRINTS PR00688 Xylose isomerase signature 180 201 1.9E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 SUPERFAMILY SSF51658 4 438 4.38E-167 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 436 2.0E-205 T 14-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 Gene3D G3DSA:3.20.20.150 2 439 8.6E-176 T 14-10-2018 AMBLS11_18475 1d783e6fc85dabbaadf16b674ae9a0e7 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 51.017 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMBLS11_11525 01e51d608e2474c6a5b22b30cd60a8cc 404 Gene3D G3DSA:3.40.47.10 1 253 5.1E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_11525 01e51d608e2474c6a5b22b30cd60a8cc 404 Gene3D G3DSA:3.40.47.10 258 402 1.8E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_11525 01e51d608e2474c6a5b22b30cd60a8cc 404 SMART SM00825 Beta-ketoacyl synthase 4 404 3.1E-11 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMBLS11_11525 01e51d608e2474c6a5b22b30cd60a8cc 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 3.5E-29 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMBLS11_11525 01e51d608e2474c6a5b22b30cd60a8cc 404 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMBLS11_11525 01e51d608e2474c6a5b22b30cd60a8cc 404 SUPERFAMILY SSF53901 1 251 6.89E-61 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_11525 01e51d608e2474c6a5b22b30cd60a8cc 404 SUPERFAMILY SSF53901 213 402 6.17E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_11525 01e51d608e2474c6a5b22b30cd60a8cc 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 6.9E-40 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMBLS11_06355 a7dd57c5ee281ad0986d23f93abddaab 240 SUPERFAMILY SSF52317 5 218 2.75E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_06355 a7dd57c5ee281ad0986d23f93abddaab 240 Gene3D G3DSA:3.40.50.880 3 231 7.1E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_06355 a7dd57c5ee281ad0986d23f93abddaab 240 Pfam PF03575 Peptidase family S51 6 209 1.0E-58 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 Gene3D G3DSA:3.40.190.10 96 260 2.5E-42 T 14-10-2018 AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 Gene3D G3DSA:1.10.10.10 4 89 9.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 Pfam PF03466 LysR substrate binding domain 89 238 2.8E-25 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 SUPERFAMILY SSF46785 2 84 2.58E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 Gene3D G3DSA:3.40.190.10 163 254 2.5E-42 T 14-10-2018 AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13795 02b6ef464df599f05be8c8535f32fefe 282 SUPERFAMILY SSF53850 84 268 8.53E-27 T 14-10-2018 AMBLS11_07520 8c7f65d44d565b3097ccc32da2bb1496 336 Gene3D G3DSA:3.20.20.300 1 325 2.7E-107 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMBLS11_07520 8c7f65d44d565b3097ccc32da2bb1496 336 SUPERFAMILY SSF51445 4 295 1.01E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_07520 8c7f65d44d565b3097ccc32da2bb1496 336 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 11 291 3.7E-73 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_07520 8c7f65d44d565b3097ccc32da2bb1496 336 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 335 45.105 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMBLS11_00215 a0b8580dfc36dc941c19ef20fa51f91d 195 SUPERFAMILY SSF46689 5 76 8.48E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_00215 a0b8580dfc36dc941c19ef20fa51f91d 195 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 195 41.715 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AMBLS11_00215 a0b8580dfc36dc941c19ef20fa51f91d 195 Gene3D G3DSA:1.10.357.10 7 194 5.1E-64 T 14-10-2018 AMBLS11_00215 a0b8580dfc36dc941c19ef20fa51f91d 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 57 8.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_00215 a0b8580dfc36dc941c19ef20fa51f91d 195 SUPERFAMILY SSF48498 82 190 8.26E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMBLS11_12955 c46803708e7ac2c1b7737d7a9aafc1e8 425 Pfam PF01757 Acyltransferase family 37 403 1.0E-19 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMBLS11_14760 a6ebe262ca22ec07558477e19cd1cf59 269 PIRSF PIRSF003092 1 269 4.2E-95 T 14-10-2018 IPR025501 ATP binding protein MinD AMBLS11_14760 a6ebe262ca22ec07558477e19cd1cf59 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 265 1.8E-113 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AMBLS11_14760 a6ebe262ca22ec07558477e19cd1cf59 269 SUPERFAMILY SSF52540 1 267 3.64E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14760 a6ebe262ca22ec07558477e19cd1cf59 269 Gene3D G3DSA:3.40.50.300 1 258 9.2E-72 T 14-10-2018 AMBLS11_14760 a6ebe262ca22ec07558477e19cd1cf59 269 Pfam PF13614 AAA domain 3 159 1.5E-21 T 14-10-2018 IPR025669 AAA domain AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 Gene3D G3DSA:1.25.40.10 155 407 7.7E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 Pfam PF14559 Tetratricopeptide repeat 204 263 1.2E-5 T 14-10-2018 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SUPERFAMILY SSF48452 580 774 4.17E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 Gene3D G3DSA:1.25.40.10 28 106 3.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SUPERFAMILY SSF48452 254 626 6.83E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SMART SM00028 459 492 64.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SMART SM00028 58 91 460.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SMART SM00028 594 627 0.007 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SMART SM00028 257 290 25.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SMART SM00028 796 829 0.49 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SMART SM00028 223 256 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SMART SM00028 830 863 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 Gene3D G3DSA:1.25.40.10 408 556 9.9E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SUPERFAMILY SSF48452 771 883 2.09E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 542 617 7.1E-7 T 14-10-2018 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 9 885 3.7E-130 T 14-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 Gene3D G3DSA:1.25.40.10 557 905 6.2E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_13095 f96b34943a979f7616a469d943ffd368 910 SUPERFAMILY SSF48452 23 286 2.04E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_17405 98030be10f0111bf625dac926dce7cf7 226 SUPERFAMILY SSF50800 12 221 3.19E-51 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMBLS11_17405 98030be10f0111bf625dac926dce7cf7 226 Pfam PF03473 MOSC domain 60 172 3.1E-19 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMBLS11_17405 98030be10f0111bf625dac926dce7cf7 226 Gene3D G3DSA:2.40.33.20 7 226 1.4E-60 T 14-10-2018 AMBLS11_17335 a66fbd05f6b5bc572b2cb1d1965b3a24 363 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 18 356 1.2E-137 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMBLS11_17335 a66fbd05f6b5bc572b2cb1d1965b3a24 363 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 31 40 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMBLS11_17335 a66fbd05f6b5bc572b2cb1d1965b3a24 363 Gene3D G3DSA:3.20.20.210 11 363 3.1E-160 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMBLS11_17335 a66fbd05f6b5bc572b2cb1d1965b3a24 363 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 151 167 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMBLS11_17335 a66fbd05f6b5bc572b2cb1d1965b3a24 363 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 14 356 4.0E-142 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMBLS11_17335 a66fbd05f6b5bc572b2cb1d1965b3a24 363 SUPERFAMILY SSF51726 11 362 1.96E-122 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMBLS11_17335 a66fbd05f6b5bc572b2cb1d1965b3a24 363 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 15 358 50.133 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMBLS11_16120 655b70b914995a09a8c30fd1a277d474 290 SUPERFAMILY SSF49879 12 112 1.09E-15 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMBLS11_16120 655b70b914995a09a8c30fd1a277d474 290 Gene3D G3DSA:2.60.200.20 4 114 3.7E-14 T 14-10-2018 AMBLS11_16120 655b70b914995a09a8c30fd1a277d474 290 SMART SM00240 38 89 1.8E-4 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMBLS11_16120 655b70b914995a09a8c30fd1a277d474 290 SUPERFAMILY SSF55781 123 277 1.59E-17 T 14-10-2018 AMBLS11_16120 655b70b914995a09a8c30fd1a277d474 290 Gene3D G3DSA:3.30.450.40 121 277 6.7E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_16120 655b70b914995a09a8c30fd1a277d474 290 Pfam PF01590 GAF domain 155 277 1.7E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_16120 655b70b914995a09a8c30fd1a277d474 290 SMART SM00065 143 287 2.1E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_16120 655b70b914995a09a8c30fd1a277d474 290 Pfam PF00498 FHA domain 39 102 2.3E-11 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMBLS11_17425 435d3d8aeefac477f22b76367dac9d60 150 Gene3D G3DSA:3.40.5.10 1 50 5.5E-23 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17425 435d3d8aeefac477f22b76367dac9d60 150 Gene3D G3DSA:3.10.430.100 61 149 8.4E-29 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMBLS11_17425 435d3d8aeefac477f22b76367dac9d60 150 SUPERFAMILY SSF55658 1 57 6.1E-18 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMBLS11_17425 435d3d8aeefac477f22b76367dac9d60 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.9E-20 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17425 435d3d8aeefac477f22b76367dac9d60 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.146 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17425 435d3d8aeefac477f22b76367dac9d60 150 SUPERFAMILY SSF55653 60 148 2.75E-24 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMBLS11_17425 435d3d8aeefac477f22b76367dac9d60 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.1E-52 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17425 435d3d8aeefac477f22b76367dac9d60 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 8.1E-24 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal AMBLS11_17425 435d3d8aeefac477f22b76367dac9d60 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 6.9E-40 T 14-10-2018 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.9E-40 T 14-10-2018 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.9E-40 T 14-10-2018 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.9E-40 T 14-10-2018 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 6.9E-40 T 14-10-2018 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 6.7E-123 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.6E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 Gene3D G3DSA:3.50.50.60 9 312 3.3E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 Gene3D G3DSA:3.50.50.60 118 244 3.3E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 SUPERFAMILY SSF51905 2 314 2.48E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08395 e948b815877f4ac6ec26a6ab4baa103e 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.0E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_18425 016383931197d84c1cea231b12232f46 398 Pfam PF12833 Helix-turn-helix domain 311 385 3.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_18425 016383931197d84c1cea231b12232f46 398 Gene3D G3DSA:3.40.50.2300 8 269 1.5E-81 T 14-10-2018 AMBLS11_18425 016383931197d84c1cea231b12232f46 398 SUPERFAMILY SSF46689 338 387 2.15E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_18425 016383931197d84c1cea231b12232f46 398 SUPERFAMILY SSF53822 11 301 2.14E-39 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_18425 016383931197d84c1cea231b12232f46 398 SMART SM00342 301 384 1.9E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_18425 016383931197d84c1cea231b12232f46 398 Gene3D G3DSA:1.10.10.60 281 390 5.7E-26 T 14-10-2018 AMBLS11_18425 016383931197d84c1cea231b12232f46 398 Gene3D G3DSA:3.40.50.2300 102 278 1.5E-81 T 14-10-2018 AMBLS11_18425 016383931197d84c1cea231b12232f46 398 Pfam PF13377 Periplasmic binding protein-like domain 112 277 2.1E-35 T 14-10-2018 AMBLS11_18750 6fd11a30c11ec7969ac3ae1f5c9d3c62 820 SUPERFAMILY SSF55486 372 600 4.71E-40 T 14-10-2018 AMBLS11_18750 6fd11a30c11ec7969ac3ae1f5c9d3c62 820 Pfam PF01433 Peptidase family M1 domain 373 594 4.2E-13 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_18750 6fd11a30c11ec7969ac3ae1f5c9d3c62 820 Gene3D G3DSA:1.10.390.60 371 598 9.0E-28 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 Gene3D G3DSA:3.30.70.1430 556 651 0.0 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 Gene3D G3DSA:3.30.70.1440 652 847 0.0 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 Gene3D G3DSA:1.20.1640.10 502 1004 0.0 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 SUPERFAMILY SSF82866 291 489 2.09E-48 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 SUPERFAMILY SSF82693 554 654 1.78E-14 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.8E-80 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.8E-80 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.8E-80 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.8E-80 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 4.8E-80 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.8E-80 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.8E-80 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 4.8E-80 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.8E-80 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 Gene3D G3DSA:3.30.2090.10 701 790 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 Gene3D G3DSA:3.30.70.1430 40 798 0.0 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 SUPERFAMILY SSF82693 137 324 1.41E-21 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 SUPERFAMILY SSF82714 182 266 4.97E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 SUPERFAMILY SSF82866 789 1009 1.57E-47 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 Pfam PF00873 AcrB/AcrD/AcrF family 4 1006 2.8E-300 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 SUPERFAMILY SSF82693 40 134 7.46E-28 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 AMBLS11_03100 268acb26f0d5ccb3cab539fb474a4cdc 1035 SUPERFAMILY SSF82714 702 787 2.75E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 Gene3D G3DSA:1.50.10.10 6 507 9.2E-162 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 ProSitePatterns PS00928 Trehalase signature 2. 419 428 - T 14-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 ProSitePatterns PS00927 Trehalase signature 1. 125 138 - T 14-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 SUPERFAMILY SSF48208 11 502 8.16E-140 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 PRINTS PR00744 Glycosyl hydrolase family 37 signature 277 294 4.1E-37 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 PRINTS PR00744 Glycosyl hydrolase family 37 signature 244 261 4.1E-37 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 PRINTS PR00744 Glycosyl hydrolase family 37 signature 412 428 4.1E-37 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 PRINTS PR00744 Glycosyl hydrolase family 37 signature 167 185 4.1E-37 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 PRINTS PR00744 Glycosyl hydrolase family 37 signature 309 326 4.1E-37 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 PRINTS PR00744 Glycosyl hydrolase family 37 signature 489 502 4.1E-37 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMBLS11_01605 76bcfc9a720ac2879747a72aa3544015 507 Pfam PF01204 Trehalase 27 504 1.3E-127 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 735 227.509 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 SUPERFAMILY SSF142019 99 307 1.1E-62 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 Pfam PF10531 SLBB domain 300 350 1.2E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 Pfam PF13375 RnfC Barrel sandwich hybrid domain 19 120 3.4E-32 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 Gene3D G3DSA:3.40.50.11540 149 296 4.9E-11 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 Gene3D G3DSA:1.10.1060.10 369 450 6.1E-11 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 145 287 4.8E-47 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 422 433 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 18 452 2.8E-182 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 SUPERFAMILY SSF46548 340 450 5.1E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMBLS11_05715 ee5e79e6c3a01218d894a95ba31ada03 990 Pfam PF12838 4Fe-4S dicluster domain 383 435 2.0E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMBLS11_03985 2493f090bf701c84a68bdf40dd1c04e2 322 Pfam PF00491 Arginase family 37 314 4.3E-51 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMBLS11_03985 2493f090bf701c84a68bdf40dd1c04e2 322 TIGRFAM TIGR01227 hutG: formimidoylglutamase 4 315 4.3E-90 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AMBLS11_03985 2493f090bf701c84a68bdf40dd1c04e2 322 Hamap MF_00737 Formimidoylglutamase [hutG]. 3 316 37.13 T 14-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AMBLS11_03985 2493f090bf701c84a68bdf40dd1c04e2 322 PIRSF PIRSF036979 15 321 3.4E-28 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMBLS11_03985 2493f090bf701c84a68bdf40dd1c04e2 322 Gene3D G3DSA:3.40.800.10 1 322 1.7E-100 T 14-10-2018 AMBLS11_03985 2493f090bf701c84a68bdf40dd1c04e2 322 SUPERFAMILY SSF52768 4 316 3.6E-71 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily AMBLS11_13695 fa356b31d49a2af8e51c22dc8a558acf 202 SUPERFAMILY SSF56935 3 166 1.14E-19 T 14-10-2018 AMBLS11_13695 fa356b31d49a2af8e51c22dc8a558acf 202 Gene3D G3DSA:2.40.170.20 2 181 8.1E-19 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_13695 fa356b31d49a2af8e51c22dc8a558acf 202 Pfam PF00593 TonB dependent receptor 3 167 8.3E-11 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_02390 e8fc791acabe9d0b830eb82e442816d4 392 Pfam PF00266 Aminotransferase class-V 53 362 2.3E-14 T 14-10-2018 IPR000192 Aminotransferase class V domain AMBLS11_02390 e8fc791acabe9d0b830eb82e442816d4 392 Gene3D G3DSA:3.90.1150.10 296 384 2.2E-38 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_02390 e8fc791acabe9d0b830eb82e442816d4 392 Gene3D G3DSA:3.40.640.10 29 295 2.2E-38 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_02390 e8fc791acabe9d0b830eb82e442816d4 392 SUPERFAMILY SSF53383 23 384 4.33E-38 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_17235 1ee75d998d7206c609540f6748fd5621 250 Pfam PF13489 Methyltransferase domain 64 185 7.2E-18 T 14-10-2018 AMBLS11_17235 1ee75d998d7206c609540f6748fd5621 250 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 17 243 1.6E-75 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AMBLS11_17235 1ee75d998d7206c609540f6748fd5621 250 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 17 249 33.784 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AMBLS11_17235 1ee75d998d7206c609540f6748fd5621 250 SUPERFAMILY SSF53335 17 232 1.37E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_17235 1ee75d998d7206c609540f6748fd5621 250 Gene3D G3DSA:3.40.50.150 17 248 7.9E-62 T 14-10-2018 AMBLS11_14345 a7a3ba45ff87866936aeb792478a2e4b 292 Gene3D G3DSA:1.10.10.10 3 90 2.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_14345 a7a3ba45ff87866936aeb792478a2e4b 292 Pfam PF03466 LysR substrate binding domain 88 287 6.5E-40 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_14345 a7a3ba45ff87866936aeb792478a2e4b 292 SUPERFAMILY SSF53850 90 288 5.89E-42 T 14-10-2018 AMBLS11_14345 a7a3ba45ff87866936aeb792478a2e4b 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 62 8.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_14345 a7a3ba45ff87866936aeb792478a2e4b 292 Gene3D G3DSA:3.40.190.290 91 289 7.1E-60 T 14-10-2018 AMBLS11_14345 a7a3ba45ff87866936aeb792478a2e4b 292 SUPERFAMILY SSF46785 6 86 7.87E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_09190 505fcf34d1d41425d665bfc71f8cb799 80 ProSitePatterns PS00018 EF-hand calcium-binding domain. 21 33 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMBLS11_09190 505fcf34d1d41425d665bfc71f8cb799 80 SMART SM00054 48 76 0.0061 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 AMBLS11_09190 505fcf34d1d41425d665bfc71f8cb799 80 SMART SM00054 12 40 4.4E-5 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 AMBLS11_09190 505fcf34d1d41425d665bfc71f8cb799 80 Gene3D G3DSA:1.10.238.10 1 78 1.4E-18 T 14-10-2018 AMBLS11_09190 505fcf34d1d41425d665bfc71f8cb799 80 ProSitePatterns PS00018 EF-hand calcium-binding domain. 57 69 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMBLS11_09190 505fcf34d1d41425d665bfc71f8cb799 80 Pfam PF13499 EF-hand domain pair 11 73 5.8E-12 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 AMBLS11_09190 505fcf34d1d41425d665bfc71f8cb799 80 SUPERFAMILY SSF47473 4 74 4.38E-19 T 14-10-2018 IPR011992 EF-hand domain pair AMBLS11_08435 06e462dfc6948828e1be8a45b6947226 320 Pfam PF04055 Radical SAM superfamily 90 250 5.9E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_08435 06e462dfc6948828e1be8a45b6947226 320 Gene3D G3DSA:3.20.20.70 45 287 5.0E-21 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_08435 06e462dfc6948828e1be8a45b6947226 320 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 154.168 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMBLS11_08435 06e462dfc6948828e1be8a45b6947226 320 PIRSF PIRSF005963 1 320 2.7E-131 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMBLS11_08435 06e462dfc6948828e1be8a45b6947226 320 SUPERFAMILY SSF102114 50 313 4.58E-67 T 14-10-2018 AMBLS11_08435 06e462dfc6948828e1be8a45b6947226 320 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 72 5.7E-9 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMBLS11_08435 06e462dfc6948828e1be8a45b6947226 320 TIGRFAM TIGR00510 lipA: lipoyl synthase 22 319 3.6E-143 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMBLS11_08435 06e462dfc6948828e1be8a45b6947226 320 SMART SM00729 83 291 1.6E-13 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMBLS11_08160 3f3565813720a4ee03866c07aef950e0 494 Pfam PF03929 PepSY-associated TM region 11 353 1.6E-54 T 14-10-2018 IPR005625 PepSY-associated TM protein AMBLS11_04005 d2f486cd00ce41e8c893c300679fc329 526 Gene3D G3DSA:1.20.200.10 209 525 2.8E-121 T 14-10-2018 AMBLS11_04005 d2f486cd00ce41e8c893c300679fc329 526 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 14 522 44.05 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04005 d2f486cd00ce41e8c893c300679fc329 526 SUPERFAMILY SSF48557 17 517 7.3E-192 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMBLS11_04005 d2f486cd00ce41e8c893c300679fc329 526 Pfam PF00221 Aromatic amino acid lyase 22 488 1.5E-184 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AMBLS11_04005 d2f486cd00ce41e8c893c300679fc329 526 Gene3D G3DSA:1.10.275.10 13 208 9.6E-69 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal AMBLS11_04005 d2f486cd00ce41e8c893c300679fc329 526 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 17 521 1.1E-212 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMBLS11_04005 d2f486cd00ce41e8c893c300679fc329 526 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 150 166 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AMBLS11_02155 cd62af1a8c89368c2ad5e17fb2b0fe83 469 Gene3D G3DSA:2.20.200.10 106 353 4.0E-76 T 14-10-2018 AMBLS11_02155 cd62af1a8c89368c2ad5e17fb2b0fe83 469 Gene3D G3DSA:1.20.1600.10 59 463 4.0E-76 T 14-10-2018 AMBLS11_02155 cd62af1a8c89368c2ad5e17fb2b0fe83 469 Pfam PF02321 Outer membrane efflux protein 285 453 8.8E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_02155 cd62af1a8c89368c2ad5e17fb2b0fe83 469 Pfam PF02321 Outer membrane efflux protein 74 252 1.4E-16 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_02155 cd62af1a8c89368c2ad5e17fb2b0fe83 469 SUPERFAMILY SSF56954 5 460 2.49E-67 T 14-10-2018 AMBLS11_14745 d60f5484770c4bb7ab3241ef8df6b6e2 114 Gene3D G3DSA:2.60.300.12 8 114 3.0E-33 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMBLS11_14745 d60f5484770c4bb7ab3241ef8df6b6e2 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 114 2.9E-38 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AMBLS11_14745 d60f5484770c4bb7ab3241ef8df6b6e2 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.147 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AMBLS11_14745 d60f5484770c4bb7ab3241ef8df6b6e2 114 SUPERFAMILY SSF89360 8 103 1.16E-30 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMBLS11_14745 d60f5484770c4bb7ab3241ef8df6b6e2 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.1E-20 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AMBLS11_14745 d60f5484770c4bb7ab3241ef8df6b6e2 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AMBLS11_15610 8322df28064d8b8c3f708a21bd97dafd 350 Gene3D G3DSA:1.20.120.1460 264 340 2.1E-21 T 14-10-2018 AMBLS11_15610 8322df28064d8b8c3f708a21bd97dafd 350 SUPERFAMILY SSF51395 21 316 2.7E-71 T 14-10-2018 AMBLS11_15610 8322df28064d8b8c3f708a21bd97dafd 350 Pfam PF01207 Dihydrouridine synthase (Dus) 24 332 1.5E-84 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMBLS11_15610 8322df28064d8b8c3f708a21bd97dafd 350 Gene3D G3DSA:3.20.20.70 18 259 2.4E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_15610 8322df28064d8b8c3f708a21bd97dafd 350 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 20 336 3.0E-141 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AMBLS11_15610 8322df28064d8b8c3f708a21bd97dafd 350 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMBLS11_15610 8322df28064d8b8c3f708a21bd97dafd 350 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 16 337 49.723 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AMBLS11_17690 4cf92322c0495b1f76af9f027ef1bf32 312 Gene3D G3DSA:3.40.50.1820 24 304 1.6E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_17690 4cf92322c0495b1f76af9f027ef1bf32 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 137 150 1.8E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_17690 4cf92322c0495b1f76af9f027ef1bf32 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 1.8E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_17690 4cf92322c0495b1f76af9f027ef1bf32 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 251 265 1.8E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_17690 4cf92322c0495b1f76af9f027ef1bf32 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 93 1.8E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_17690 4cf92322c0495b1f76af9f027ef1bf32 312 SUPERFAMILY SSF53474 31 303 1.11E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_17690 4cf92322c0495b1f76af9f027ef1bf32 312 Pfam PF00561 alpha/beta hydrolase fold 53 290 5.7E-27 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_08180 9cb8de6c4a8d06aa71b7bc63bfbf16c5 746 Pfam PF08497 Radical SAM N-terminal 1 350 2.8E-140 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AMBLS11_08180 9cb8de6c4a8d06aa71b7bc63bfbf16c5 746 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 1 617 47.776 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 AMBLS11_08180 9cb8de6c4a8d06aa71b7bc63bfbf16c5 746 Gene3D G3DSA:3.80.30.20 346 614 3.5E-16 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMBLS11_08180 9cb8de6c4a8d06aa71b7bc63bfbf16c5 746 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 1 615 6.7E-258 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 AMBLS11_08180 9cb8de6c4a8d06aa71b7bc63bfbf16c5 746 Pfam PF04055 Radical SAM superfamily 351 554 1.8E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_08180 9cb8de6c4a8d06aa71b7bc63bfbf16c5 746 SMART SM00729 347 598 1.1E-6 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMBLS11_08180 9cb8de6c4a8d06aa71b7bc63bfbf16c5 746 SUPERFAMILY SSF102114 331 584 9.42E-12 T 14-10-2018 AMBLS11_08180 9cb8de6c4a8d06aa71b7bc63bfbf16c5 746 Pfam PF11842 Domain of unknown function (DUF3362) 565 713 5.5E-41 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AMBLS11_08180 9cb8de6c4a8d06aa71b7bc63bfbf16c5 746 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 351 371 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMBLS11_11265 cb518932e16c22ef664637e737b3cb75 223 SUPERFAMILY SSF55469 1 220 6.67E-40 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMBLS11_11265 cb518932e16c22ef664637e737b3cb75 223 Gene3D G3DSA:3.40.109.10 1 222 3.2E-52 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMBLS11_11265 cb518932e16c22ef664637e737b3cb75 223 Pfam PF00881 Nitroreductase family 8 197 5.4E-29 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMBLS11_09790 ab6f8430a9a0fc2de4e9277095c21379 145 Pfam PF10116 Protein required for attachment to host cells 7 144 6.7E-25 T 14-10-2018 IPR019291 Host attachment protein AMBLS11_10480 f259252fb2c7961ef9cc6a031bfb954a 174 SUPERFAMILY SSF52218 4 170 1.18E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_10480 f259252fb2c7961ef9cc6a031bfb954a 174 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 1.7E-70 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AMBLS11_10480 f259252fb2c7961ef9cc6a031bfb954a 174 Pfam PF00258 Flavodoxin 6 160 4.5E-30 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMBLS11_10480 f259252fb2c7961ef9cc6a031bfb954a 174 PIRSF PIRSF038996 1 172 1.2E-66 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AMBLS11_10480 f259252fb2c7961ef9cc6a031bfb954a 174 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AMBLS11_10480 f259252fb2c7961ef9cc6a031bfb954a 174 Gene3D G3DSA:3.40.50.360 3 174 9.6E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_10515 7066792d131ddfd9233af941d487ed38 294 SUPERFAMILY SSF50249 159 224 1.88E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_10515 7066792d131ddfd9233af941d487ed38 294 Gene3D G3DSA:1.10.10.10 232 292 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_10515 7066792d131ddfd9233af941d487ed38 294 Pfam PF13509 S1 domain 4 81 1.3E-11 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain AMBLS11_10515 7066792d131ddfd9233af941d487ed38 294 PIRSF PIRSF012524 1 294 3.0E-56 T 14-10-2018 IPR014464 Conserved virulence factor B AMBLS11_03185 f089151b391e7e72c77489ce31be6067 408 TIGRFAM TIGR00843 benE: benzoate transporter 9 399 1.4E-84 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMBLS11_03185 f089151b391e7e72c77489ce31be6067 408 Pfam PF03594 Benzoate membrane transport protein 3 399 1.4E-110 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMBLS11_07330 25536a7eaf4eaf1215f43704898b9d7c 469 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 465 9.0E-228 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AMBLS11_07330 25536a7eaf4eaf1215f43704898b9d7c 469 Gene3D G3DSA:2.60.120.10 343 453 2.8E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_07330 25536a7eaf4eaf1215f43704898b9d7c 469 Gene3D G3DSA:3.90.550.10 1 342 3.1E-120 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07330 25536a7eaf4eaf1215f43704898b9d7c 469 SUPERFAMILY SSF53448 1 276 1.27E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07330 25536a7eaf4eaf1215f43704898b9d7c 469 Pfam PF00483 Nucleotidyl transferase 2 283 3.6E-70 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMBLS11_07330 25536a7eaf4eaf1215f43704898b9d7c 469 Pfam PF01050 Mannose-6-phosphate isomerase 311 461 2.4E-74 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AMBLS11_07330 25536a7eaf4eaf1215f43704898b9d7c 469 SUPERFAMILY SSF51182 181 465 1.05E-89 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 SUPERFAMILY SSF55021 298 359 1.76E-12 T 14-10-2018 AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 Pfam PF00696 Amino acid kinase family 7 279 2.7E-50 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 Gene3D G3DSA:3.30.70.260 305 446 9.7E-44 T 14-10-2018 AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 5 449 1.5E-122 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 SUPERFAMILY SSF55021 376 448 2.98E-13 T 14-10-2018 AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 Gene3D G3DSA:1.20.120.1320 43 136 4.3E-98 T 14-10-2018 AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 SUPERFAMILY SSF53633 7 294 4.97E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 Gene3D G3DSA:3.40.1160.10 7 291 4.3E-98 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 PIRSF PIRSF000726 3 449 2.6E-128 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.3E-126 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_03335 3deb0572cdbdb20ebd1acde0cfbe2802 449 Gene3D G3DSA:3.30.70.260 311 383 9.7E-44 T 14-10-2018 AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 Pfam PF13721 SecD export protein N-terminal TM region 2 103 6.2E-32 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 SUPERFAMILY SSF82866 409 603 7.46E-45 T 14-10-2018 AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 Gene3D G3DSA:1.20.1640.10 453 600 4.5E-8 T 14-10-2018 AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 600 3.2E-150 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 613 47.517 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 Pfam PF02355 Protein export membrane protein 432 601 3.0E-20 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 Pfam PF07549 SecD/SecF GG Motif 116 140 1.2E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 PRINTS PR00702 Acriflavin resistance protein family signature 502 526 2.0E-7 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 PRINTS PR00702 Acriflavin resistance protein family signature 577 600 2.0E-7 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 2.0E-7 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 Gene3D G3DSA:3.30.1360.200 277 430 1.2E-50 T 14-10-2018 AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 344 593 5.1E-83 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMBLS11_12970 147f47fe1ca2f0ba601b03581192fc88 614 Gene3D G3DSA:3.30.70.3400 217 436 1.2E-50 T 14-10-2018 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 SUPERFAMILY SSF50615 1 76 2.88E-23 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 3.1E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 Gene3D G3DSA:1.10.1140.10 346 461 2.5E-59 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 SUPERFAMILY SSF52540 79 349 3.5E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 SUPERFAMILY SSF47917 346 460 5.76E-55 T 14-10-2018 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 Gene3D G3DSA:2.40.10.170 1 76 8.0E-27 T 14-10-2018 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 SMART SM00382 143 328 0.0026 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.9E-257 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 Gene3D G3DSA:3.40.50.300 77 345 4.3E-111 T 14-10-2018 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 56.432 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AMBLS11_18930 4b2f6151f038ea7a89059762ab0ab305 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 74 3.7E-17 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_03160 1ed420605ebe5690b15b9f9009c2939d 164 SUPERFAMILY SSF55083 4 157 2.88E-40 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMBLS11_03160 1ed420605ebe5690b15b9f9009c2939d 164 Gene3D G3DSA:3.30.70.560 4 157 5.8E-35 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMBLS11_03160 1ed420605ebe5690b15b9f9009c2939d 164 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 7 131 7.6E-24 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMBLS11_03160 1ed420605ebe5690b15b9f9009c2939d 164 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 8 131 8.8E-24 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMBLS11_14765 9f4490c9306e6026a9c583e18a3ba306 274 Gene3D G3DSA:2.160.20.70 166 274 1.1E-32 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AMBLS11_14765 9f4490c9306e6026a9c583e18a3ba306 274 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 21 273 1.7E-57 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AMBLS11_14765 9f4490c9306e6026a9c583e18a3ba306 274 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 170 271 2.4E-32 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AMBLS11_14765 9f4490c9306e6026a9c583e18a3ba306 274 SUPERFAMILY SSF63848 169 273 9.55E-32 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 AMBLS11_14765 9f4490c9306e6026a9c583e18a3ba306 274 Gene3D G3DSA:3.30.750.120 15 128 7.7E-19 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily AMBLS11_14765 9f4490c9306e6026a9c583e18a3ba306 274 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 18 116 1.2E-11 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AMBLS11_14765 9f4490c9306e6026a9c583e18a3ba306 274 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 20 274 25.425 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 Pfam PF10438 Cyclo-malto-dextrinase C-terminal domain 559 645 8.1E-20 T 14-10-2018 IPR019492 Cyclo-malto-dextrinase, C-terminal AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 Pfam PF00128 Alpha amylase, catalytic domain 184 500 1.8E-53 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 SUPERFAMILY SSF51011 559 645 3.24E-5 T 14-10-2018 AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 Gene3D G3DSA:3.20.20.80 138 557 3.0E-138 T 14-10-2018 AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 Pfam PF09087 Cyclomaltodextrinase, N-terminal 48 133 2.0E-24 T 14-10-2018 IPR015171 Cyclomaltodextrinase, N-terminal AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 SUPERFAMILY SSF51445 147 553 5.38E-99 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 SUPERFAMILY SSF81296 46 133 1.54E-22 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 Gene3D G3DSA:2.60.40.1180 558 647 7.0E-10 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 SMART SM00642 150 548 9.9E-67 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_08975 51ba9a924e17f6d83ccd54f2c8083aef 648 Gene3D G3DSA:2.60.40.10 43 130 1.6E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_02775 8218f602ff867206f7f5ac436b2c9b27 260 SMART SM00530 9 63 9.5E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_02775 8218f602ff867206f7f5ac436b2c9b27 260 Gene3D G3DSA:1.10.260.40 4 71 4.9E-11 T 14-10-2018 AMBLS11_02775 8218f602ff867206f7f5ac436b2c9b27 260 Pfam PF01381 Helix-turn-helix 11 62 1.5E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_02775 8218f602ff867206f7f5ac436b2c9b27 260 SUPERFAMILY SSF47413 1 68 3.49E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_02775 8218f602ff867206f7f5ac436b2c9b27 260 Pfam PF13211 Protein of unknown function (DUF4019) 155 257 5.4E-27 T 14-10-2018 IPR025091 Protein of unknown function DUF4019 AMBLS11_17295 d90e3e5d17d3a4255104d1aa3ee2340b 311 SUPERFAMILY SSF52540 11 154 3.23E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17295 d90e3e5d17d3a4255104d1aa3ee2340b 311 Gene3D G3DSA:3.40.50.300 15 295 8.7E-108 T 14-10-2018 AMBLS11_17295 d90e3e5d17d3a4255104d1aa3ee2340b 311 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 11 296 1.2E-107 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMBLS11_17295 d90e3e5d17d3a4255104d1aa3ee2340b 311 Pfam PF01715 IPP transferase 45 290 2.7E-86 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMBLS11_17295 d90e3e5d17d3a4255104d1aa3ee2340b 311 Gene3D G3DSA:1.10.20.140 118 189 8.7E-108 T 14-10-2018 AMBLS11_17295 d90e3e5d17d3a4255104d1aa3ee2340b 311 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 11 307 30.263 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 20.153 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 509 7.5E-141 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 PRINTS PR01806 Virulence factor MviN signature 166 187 6.1E-79 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 PRINTS PR01806 Virulence factor MviN signature 54 70 6.1E-79 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 PRINTS PR01806 Virulence factor MviN signature 268 294 6.1E-79 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 PRINTS PR01806 Virulence factor MviN signature 35 54 6.1E-79 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 PRINTS PR01806 Virulence factor MviN signature 366 385 6.1E-79 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 PRINTS PR01806 Virulence factor MviN signature 418 435 6.1E-79 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 PRINTS PR01806 Virulence factor MviN signature 142 166 6.1E-79 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 Pfam PF03023 MviN-like protein 30 471 1.5E-146 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_12670 15569732de5fe3f1372b5e1efcdae0d9 519 PIRSF PIRSF002869 2 517 3.9E-156 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMBLS11_15295 4eadce9667279a89f8b1bf7eea16c3e0 396 SMART SM01204 250 381 2.0E-30 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMBLS11_15295 4eadce9667279a89f8b1bf7eea16c3e0 396 Pfam PF08495 FIST N domain 52 248 3.4E-29 T 14-10-2018 IPR013702 FIST domain, N-terminal AMBLS11_15295 4eadce9667279a89f8b1bf7eea16c3e0 396 Pfam PF10442 FIST C domain 250 380 1.6E-15 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMBLS11_15295 4eadce9667279a89f8b1bf7eea16c3e0 396 SMART SM00897 48 249 1.1E-42 T 14-10-2018 IPR013702 FIST domain, N-terminal AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 SUPERFAMILY SSF50993 43 450 1.94E-92 T 14-10-2018 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 544 563 1.2E-57 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 490 508 1.2E-57 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 649 671 1.2E-57 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 574 594 1.2E-57 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 1.2E-57 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 516 540 1.2E-57 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 SUPERFAMILY SSF53474 458 718 1.3E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 48 447 5.2E-109 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 Gene3D G3DSA:3.40.50.1820 56 715 7.4E-252 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 Gene3D G3DSA:2.130.10.120 114 450 7.4E-252 T 14-10-2018 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 551 581 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AMBLS11_10430 9485d83f7485dee7bf1de92ee8fcd214 720 Pfam PF00326 Prolyl oligopeptidase family 506 719 3.7E-63 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 SUPERFAMILY SSF52540 206 447 3.17E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 SMART SM00382 226 369 5.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 SMART SM00091 80 146 8.7E-6 T 14-10-2018 IPR000014 PAS domain AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 418 427 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 2.7E-28 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 Gene3D G3DSA:1.10.10.60 454 513 2.1E-27 T 14-10-2018 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 Gene3D G3DSA:3.30.70.260 1 80 2.1E-26 T 14-10-2018 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 Pfam PF00158 Sigma-54 interaction domain 207 371 1.3E-59 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 Gene3D G3DSA:3.40.50.300 193 376 3.6E-60 T 14-10-2018 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 SUPERFAMILY SSF55021 2 68 8.39E-6 T 14-10-2018 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 SUPERFAMILY SSF55785 77 130 3.14E-7 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 SUPERFAMILY SSF46689 456 512 6.57E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 Gene3D G3DSA:1.10.8.60 378 452 5.0E-22 T 14-10-2018 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 Gene3D G3DSA:3.30.450.20 82 190 2.5E-24 T 14-10-2018 AMBLS11_05250 c8a8599cea7139955e6b2388f53ecdf8 518 Pfam PF00989 PAS fold 81 129 3.7E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMBLS11_18870 27f6a60f4354f3d62859a8a617189ff3 535 Gene3D G3DSA:1.20.1250.20 11 210 1.1E-12 T 14-10-2018 AMBLS11_18870 27f6a60f4354f3d62859a8a617189ff3 535 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 85 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 AMBLS11_18870 27f6a60f4354f3d62859a8a617189ff3 535 Gene3D G3DSA:1.20.1250.20 248 520 5.6E-12 T 14-10-2018 AMBLS11_18870 27f6a60f4354f3d62859a8a617189ff3 535 SUPERFAMILY SSF103473 17 510 2.75E-32 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_18870 27f6a60f4354f3d62859a8a617189ff3 535 Pfam PF13347 MFS/sugar transport protein 12 209 3.2E-56 T 14-10-2018 AMBLS11_04085 194127733b18b773a92aecef2697013c 1002 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 188 7.3E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_04085 194127733b18b773a92aecef2697013c 1002 SUPERFAMILY SSF56935 45 1002 6.59E-81 T 14-10-2018 AMBLS11_04085 194127733b18b773a92aecef2697013c 1002 Gene3D G3DSA:2.170.130.10 40 193 2.3E-25 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_04085 194127733b18b773a92aecef2697013c 1002 Pfam PF00593 TonB dependent receptor 467 999 1.7E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_14925 aee2026fd93e9decdb063b2fbb380e62 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 350 8.1E-78 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AMBLS11_14925 aee2026fd93e9decdb063b2fbb380e62 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 349 1.4E-122 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AMBLS11_13685 a6f18cef68bbc04f8cfbe0a4291be708 396 SUPERFAMILY SSF50952 31 384 8.11E-39 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMBLS11_13685 a6f18cef68bbc04f8cfbe0a4291be708 396 Pfam PF07995 Glucose / Sorbosone dehydrogenase 56 391 2.2E-121 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMBLS11_13685 a6f18cef68bbc04f8cfbe0a4291be708 396 Gene3D G3DSA:2.120.10.30 45 394 4.0E-102 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_17895 ecb425f5df168924e248d6e484d7c8a9 196 SUPERFAMILY SSF88946 6 84 6.67E-9 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_17895 ecb425f5df168924e248d6e484d7c8a9 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 162 4.1E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_17895 ecb425f5df168924e248d6e484d7c8a9 196 Pfam PF04542 Sigma-70 region 2 22 74 7.4E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_17895 ecb425f5df168924e248d6e484d7c8a9 196 SUPERFAMILY SSF88659 107 163 2.4E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_17895 ecb425f5df168924e248d6e484d7c8a9 196 Gene3D G3DSA:1.10.1740.10 4 107 9.5E-7 T 14-10-2018 AMBLS11_17895 ecb425f5df168924e248d6e484d7c8a9 196 Pfam PF08281 Sigma-70, region 4 115 162 7.0E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_17895 ecb425f5df168924e248d6e484d7c8a9 196 Gene3D G3DSA:1.10.10.10 108 165 6.8E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 Gene3D G3DSA:3.40.630.10 293 611 2.2E-119 T 14-10-2018 AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 300 602 9.4E-109 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 8 611 29.759 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 SUPERFAMILY SSF53187 294 609 3.77E-108 T 14-10-2018 AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 PRINTS PR00481 Cytosol aminopeptidase signature 459 479 1.6E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 PRINTS PR00481 Cytosol aminopeptidase signature 378 395 1.6E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 PRINTS PR00481 Cytosol aminopeptidase signature 437 458 1.6E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 PRINTS PR00481 Cytosol aminopeptidase signature 487 502 1.6E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 PRINTS PR00481 Cytosol aminopeptidase signature 400 421 1.6E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_15240 74be408580cbd79af77a61af839e829e 615 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 463 470 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMBLS11_03855 70f57bbda11919964c1f6c9c321d3c2b 725 SUPERFAMILY SSF161098 538 711 2.62E-21 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_03855 70f57bbda11919964c1f6c9c321d3c2b 725 Gene3D G3DSA:1.10.3720.10 516 721 1.4E-23 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_03855 70f57bbda11919964c1f6c9c321d3c2b 725 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 443 719 1.2E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMBLS11_03855 70f57bbda11919964c1f6c9c321d3c2b 725 SUPERFAMILY SSF161098 413 520 1.16E-9 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_03855 70f57bbda11919964c1f6c9c321d3c2b 725 SUPERFAMILY SSF51004 176 377 2.2E-5 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 Gene3D G3DSA:1.10.520.20 2 106 1.1E-36 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.4E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.4E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.4E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.4E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.4E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 3.1E-53 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 SUPERFAMILY SSF47928 3 105 6.93E-24 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.656 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18945 422ae63adff9381269a2483d1e41c46c 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 6.3E-58 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_12755 b7e86b63a6809c76aa607ad284d14d19 197 Pfam PF07209 Protein of unknown function (DUF1415) 18 183 2.7E-55 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 AMBLS11_09960 b4e212186bbd56f61b184feb875fa968 187 SUPERFAMILY SSF55021 92 170 2.5E-11 T 14-10-2018 AMBLS11_09960 b4e212186bbd56f61b184feb875fa968 187 SUPERFAMILY SSF55021 2 84 3.15E-14 T 14-10-2018 AMBLS11_09960 b4e212186bbd56f61b184feb875fa968 187 Gene3D G3DSA:3.30.70.260 2 86 1.5E-18 T 14-10-2018 AMBLS11_09960 b4e212186bbd56f61b184feb875fa968 187 Gene3D G3DSA:3.30.70.260 89 174 3.2E-11 T 14-10-2018 AMBLS11_09960 b4e212186bbd56f61b184feb875fa968 187 Pfam PF13740 ACT domain 4 78 3.8E-19 T 14-10-2018 AMBLS11_09960 b4e212186bbd56f61b184feb875fa968 187 PIRSF PIRSF028103 2 176 1.4E-38 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AMBLS11_06330 770b62989174033250522fd0e533738c 421 Gene3D G3DSA:3.40.640.10 59 329 2.3E-168 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_06330 770b62989174033250522fd0e533738c 421 Gene3D G3DSA:3.90.1150.10 8 413 2.3E-168 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_06330 770b62989174033250522fd0e533738c 421 SUPERFAMILY SSF53383 4 421 9.04E-129 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_06330 770b62989174033250522fd0e533738c 421 PIRSF PIRSF000521 175 421 3.6E-23 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_06330 770b62989174033250522fd0e533738c 421 PIRSF PIRSF000521 24 141 1.8E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_06330 770b62989174033250522fd0e533738c 421 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 11 420 3.0E-183 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AMBLS11_06330 770b62989174033250522fd0e533738c 421 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 421 47.633 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AMBLS11_06330 770b62989174033250522fd0e533738c 421 Pfam PF00202 Aminotransferase class-III 25 419 6.3E-128 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_06330 770b62989174033250522fd0e533738c 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_12860 7e0b9e925e2c856f759b9f88ee3a1691 345 Pfam PF13413 Helix-turn-helix domain 25 86 6.0E-16 T 14-10-2018 AMBLS11_12860 7e0b9e925e2c856f759b9f88ee3a1691 345 Pfam PF13464 Domain of unknown function (DUF4115) 271 343 1.3E-21 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 AMBLS11_12860 7e0b9e925e2c856f759b9f88ee3a1691 345 SMART SM00530 25 86 2.4E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_12860 7e0b9e925e2c856f759b9f88ee3a1691 345 SUPERFAMILY SSF47413 22 87 2.95E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_12860 7e0b9e925e2c856f759b9f88ee3a1691 345 Gene3D G3DSA:1.10.260.40 10 120 3.0E-23 T 14-10-2018 AMBLS11_04915 6cfb54ce31c09be7b5f4822c0cbaae75 304 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 18 238 1.2E-59 T 14-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase AMBLS11_04915 6cfb54ce31c09be7b5f4822c0cbaae75 304 Gene3D G3DSA:3.40.50.11190 7 115 2.3E-25 T 14-10-2018 AMBLS11_04915 6cfb54ce31c09be7b5f4822c0cbaae75 304 SUPERFAMILY SSF53756 116 296 2.51E-6 T 14-10-2018 AMBLS11_04915 6cfb54ce31c09be7b5f4822c0cbaae75 304 Gene3D G3DSA:3.40.50.2000 116 254 1.6E-32 T 14-10-2018 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 Pfam PF13432 Tetratricopeptide repeat 220 246 0.015 T 14-10-2018 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 SUPERFAMILY SSF48452 189 330 9.21E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 SUPERFAMILY SSF48452 37 248 8.34E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 34.55 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 SMART SM00028 216 249 46.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 SMART SM00028 69 102 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 SMART SM00028 107 140 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 SMART SM00028 182 215 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 SMART SM00028 282 315 86.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_09855 f471795f771b5b3a7e66005e762a96b0 389 Gene3D G3DSA:1.25.40.10 21 348 6.6E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_10665 dc21c1da1bf2ac36ac6efa16581a27b5 405 Gene3D G3DSA:3.40.190.10 65 176 4.4E-28 T 14-10-2018 AMBLS11_10665 dc21c1da1bf2ac36ac6efa16581a27b5 405 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 71 161 5.3E-20 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AMBLS11_10665 dc21c1da1bf2ac36ac6efa16581a27b5 405 SUPERFAMILY SSF53850 64 328 9.51E-38 T 14-10-2018 AMBLS11_10665 dc21c1da1bf2ac36ac6efa16581a27b5 405 Pfam PF13531 Bacterial extracellular solute-binding protein 66 329 1.2E-30 T 14-10-2018 AMBLS11_10665 dc21c1da1bf2ac36ac6efa16581a27b5 405 Gene3D G3DSA:3.40.190.10 195 292 2.5E-20 T 14-10-2018 AMBLS11_00490 505d9d30cd3a051ee838955d7050a89c 533 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 325 531 19.893 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMBLS11_00490 505d9d30cd3a051ee838955d7050a89c 533 Gene3D G3DSA:3.40.1190.20 6 282 8.8E-62 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_00490 505d9d30cd3a051ee838955d7050a89c 533 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 344 525 2.6E-51 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMBLS11_00490 505d9d30cd3a051ee838955d7050a89c 533 SUPERFAMILY SSF51391 336 528 1.57E-61 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMBLS11_00490 505d9d30cd3a051ee838955d7050a89c 533 SUPERFAMILY SSF53613 18 260 8.51E-49 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_00490 505d9d30cd3a051ee838955d7050a89c 533 Pfam PF08543 Phosphomethylpyrimidine kinase 28 262 7.5E-49 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMBLS11_00490 505d9d30cd3a051ee838955d7050a89c 533 Pfam PF02581 Thiamine monophosphate synthase 344 513 1.3E-54 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMBLS11_00490 505d9d30cd3a051ee838955d7050a89c 533 Gene3D G3DSA:3.20.20.70 328 531 5.6E-59 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_13760 35540d7e69559e8093b807484a150c04 383 Pfam PF01979 Amidohydrolase family 54 376 1.6E-18 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMBLS11_13760 35540d7e69559e8093b807484a150c04 383 SUPERFAMILY SSF51556 57 350 4.08E-91 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_13760 35540d7e69559e8093b807484a150c04 383 SUPERFAMILY SSF51338 1 378 1.15E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_13760 35540d7e69559e8093b807484a150c04 383 Gene3D G3DSA:3.20.20.140 58 344 8.1E-107 T 14-10-2018 AMBLS11_13760 35540d7e69559e8093b807484a150c04 383 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 16 370 4.9E-88 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AMBLS11_13760 35540d7e69559e8093b807484a150c04 383 PIRSF PIRSF038994 1 380 5.0E-105 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AMBLS11_13760 35540d7e69559e8093b807484a150c04 383 Gene3D G3DSA:2.30.40.10 10 376 8.1E-107 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 Gene3D G3DSA:3.40.50.720 8 290 1.6E-111 T 14-10-2018 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 226 467 2.8E-65 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 34 198 3.7E-49 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 SUPERFAMILY SSF48179 292 484 3.06E-46 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 SUPERFAMILY SSF51735 10 291 4.72E-101 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 228 240 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 PRINTS PR00084 Mannitol dehydrogenase signature 35 45 2.2E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 PRINTS PR00084 Mannitol dehydrogenase signature 228 241 2.2E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 PRINTS PR00084 Mannitol dehydrogenase signature 189 202 2.2E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 PRINTS PR00084 Mannitol dehydrogenase signature 257 272 2.2E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMBLS11_08020 1c9c31f4f98ff2099b5f8d61cae6a203 505 Gene3D G3DSA:1.10.1040.10 291 491 8.2E-55 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMBLS11_01675 ed8bbbb077f674bc83a9296387277d52 205 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 42 188 1.6E-30 T 14-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 Pfam PF01565 FAD binding domain 41 160 5.0E-8 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 Pfam PF09330 D-lactate dehydrogenase, membrane binding 271 561 4.1E-133 T 14-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 563 56.81 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 PIRSF PIRSF000101 1 565 7.5E-266 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 Gene3D G3DSA:3.30.70.610 368 429 3.3E-13 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 Gene3D G3DSA:3.30.70.610 262 335 2.7E-17 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 Gene3D G3DSA:3.30.465.10 100 261 4.0E-71 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 SUPERFAMILY SSF55103 269 560 6.1E-104 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 Gene3D G3DSA:3.30.43.10 2 95 3.4E-12 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 SUPERFAMILY SSF56176 6 266 7.01E-66 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMBLS11_12065 d9158f4dffd958739df6f8d6f1bcc119 567 Gene3D G3DSA:3.30.1370.20 430 514 5.7E-39 T 14-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AMBLS11_07665 c6c49343c3dcdf6e4602232d3185951c 320 SUPERFAMILY SSF53474 74 315 5.4E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07665 c6c49343c3dcdf6e4602232d3185951c 320 Gene3D G3DSA:3.40.50.1820 65 316 7.4E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07665 c6c49343c3dcdf6e4602232d3185951c 320 Pfam PF07859 alpha/beta hydrolase fold 107 308 9.0E-11 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMBLS11_17545 4ccc1cab21acd45f2bd50d64c6a5b52b 621 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_17545 4ccc1cab21acd45f2bd50d64c6a5b52b 621 SMART SM00382 403 571 2.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_17545 4ccc1cab21acd45f2bd50d64c6a5b52b 621 Pfam PF00005 ABC transporter 398 525 2.1E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_17545 4ccc1cab21acd45f2bd50d64c6a5b52b 621 SUPERFAMILY SSF52540 392 567 1.33E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17545 4ccc1cab21acd45f2bd50d64c6a5b52b 621 Gene3D G3DSA:3.40.50.300 352 606 2.0E-40 T 14-10-2018 AMBLS11_17545 4ccc1cab21acd45f2bd50d64c6a5b52b 621 Pfam PF00664 ABC transporter transmembrane region 41 289 8.3E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMBLS11_17545 4ccc1cab21acd45f2bd50d64c6a5b52b 621 Gene3D G3DSA:1.20.1560.10 27 331 4.9E-16 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_17545 4ccc1cab21acd45f2bd50d64c6a5b52b 621 SUPERFAMILY SSF90123 33 324 9.81E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_03385 8541d027044ccdf1d431aae53a12ad8f 240 SUPERFAMILY SSF52833 105 238 2.19E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_03385 8541d027044ccdf1d431aae53a12ad8f 240 Pfam PF10411 Disulfide bond isomerase protein N-terminus 33 83 6.3E-13 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AMBLS11_03385 8541d027044ccdf1d431aae53a12ad8f 240 SUPERFAMILY SSF54423 27 84 4.32E-12 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AMBLS11_03385 8541d027044ccdf1d431aae53a12ad8f 240 Gene3D G3DSA:3.40.30.10 84 239 7.9E-51 T 14-10-2018 AMBLS11_03385 8541d027044ccdf1d431aae53a12ad8f 240 ProSitePatterns PS00194 Thioredoxin family active site. 120 138 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMBLS11_03385 8541d027044ccdf1d431aae53a12ad8f 240 Pfam PF13098 Thioredoxin-like domain 113 236 3.3E-27 T 14-10-2018 IPR012336 Thioredoxin-like fold AMBLS11_03385 8541d027044ccdf1d431aae53a12ad8f 240 Gene3D G3DSA:3.10.450.70 24 83 2.7E-19 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AMBLS11_05640 e82d15daafc8f679ae7934a7d22fc7a5 1017 Pfam PF00593 TonB dependent receptor 521 1015 2.7E-37 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_05640 e82d15daafc8f679ae7934a7d22fc7a5 1017 Gene3D G3DSA:2.170.130.10 177 321 9.7E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_05640 e82d15daafc8f679ae7934a7d22fc7a5 1017 SMART SM00965 105 156 2.9E-6 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AMBLS11_05640 e82d15daafc8f679ae7934a7d22fc7a5 1017 Gene3D G3DSA:3.55.50.30 80 153 9.4E-17 T 14-10-2018 AMBLS11_05640 e82d15daafc8f679ae7934a7d22fc7a5 1017 Gene3D G3DSA:2.40.170.20 443 993 5.6E-51 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_05640 e82d15daafc8f679ae7934a7d22fc7a5 1017 SUPERFAMILY SSF56935 181 1016 3.66E-96 T 14-10-2018 AMBLS11_05640 e82d15daafc8f679ae7934a7d22fc7a5 1017 Pfam PF07715 TonB-dependent Receptor Plug Domain 196 317 3.8E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_17915 e30e23e85ba6fbb4df2b10b77638e07a 158 Pfam PF10688 Bacterial inner membrane protein 2 150 1.9E-52 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AMBLS11_17915 e30e23e85ba6fbb4df2b10b77638e07a 158 PIRSF PIRSF011443 1 157 1.7E-53 T 14-10-2018 IPR026267 Inner membrane protein YgjV AMBLS11_03650 12ed59a94b0432652b4f90de6e8a3e32 85 PIRSF PIRSF003113 1 85 5.0E-22 T 14-10-2018 IPR002634 BolA protein AMBLS11_03650 12ed59a94b0432652b4f90de6e8a3e32 85 SUPERFAMILY SSF82657 2 80 6.15E-27 T 14-10-2018 IPR036065 BolA-like superfamily AMBLS11_03650 12ed59a94b0432652b4f90de6e8a3e32 85 Gene3D G3DSA:3.30.300.90 1 84 9.9E-30 T 14-10-2018 AMBLS11_03650 12ed59a94b0432652b4f90de6e8a3e32 85 Pfam PF01722 BolA-like protein 12 71 6.6E-15 T 14-10-2018 IPR002634 BolA protein AMBLS11_13130 9a63f66da6ea81d737fe4beeeb916a7c 372 Pfam PF00534 Glycosyl transferases group 1 192 345 4.2E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_13130 9a63f66da6ea81d737fe4beeeb916a7c 372 SUPERFAMILY SSF53756 22 372 3.41E-59 T 14-10-2018 AMBLS11_13130 9a63f66da6ea81d737fe4beeeb916a7c 372 Gene3D G3DSA:3.40.50.2000 69 370 3.5E-50 T 14-10-2018 AMBLS11_13130 9a63f66da6ea81d737fe4beeeb916a7c 372 Gene3D G3DSA:3.40.50.2000 185 358 3.5E-50 T 14-10-2018 AMBLS11_16245 0f9a7fb5abd9fbab29bfaf1b73a1343a 289 Gene3D G3DSA:3.40.50.720 3 274 7.7E-98 T 14-10-2018 AMBLS11_16245 0f9a7fb5abd9fbab29bfaf1b73a1343a 289 SUPERFAMILY SSF51735 1 287 1.78E-90 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_16245 0f9a7fb5abd9fbab29bfaf1b73a1343a 289 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 286 1.1E-95 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMBLS11_16245 0f9a7fb5abd9fbab29bfaf1b73a1343a 289 Pfam PF04321 RmlD substrate binding domain 1 287 5.0E-96 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMBLS11_16245 0f9a7fb5abd9fbab29bfaf1b73a1343a 289 Gene3D G3DSA:3.90.25.10 160 281 7.7E-98 T 14-10-2018 AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 SUPERFAMILY SSF53448 14 384 1.24E-75 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 Gene3D G3DSA:3.90.550.10 3 291 1.1E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 Pfam PF00483 Nucleotidyl transferase 18 280 2.0E-64 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 SUPERFAMILY SSF51161 302 412 7.76E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 Gene3D G3DSA:2.160.10.10 292 418 5.8E-37 T 14-10-2018 AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 17 388 2.0E-151 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 415 49.082 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMBLS11_07615 920ecfd3151e7f0cc85021c5cff8dcc0 428 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 108 116 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMBLS11_02020 2dad31e18e93256f8e48d9ea2554be8c 175 PIRSF PIRSF016481 2 173 3.2E-35 T 14-10-2018 IPR007446 Pilus assembly protein PilP AMBLS11_02020 2dad31e18e93256f8e48d9ea2554be8c 175 Pfam PF04351 Pilus assembly protein, PilP 23 167 1.3E-44 T 14-10-2018 IPR007446 Pilus assembly protein PilP AMBLS11_02020 2dad31e18e93256f8e48d9ea2554be8c 175 Gene3D G3DSA:2.30.30.830 77 169 7.1E-23 T 14-10-2018 AMBLS11_10440 b5fd2e04f5ab27986d60853be8a7398f 410 Gene3D G3DSA:2.40.30.170 59 311 1.6E-55 T 14-10-2018 AMBLS11_10440 b5fd2e04f5ab27986d60853be8a7398f 410 Pfam PF13437 HlyD family secretion protein 184 290 2.0E-13 T 14-10-2018 AMBLS11_10440 b5fd2e04f5ab27986d60853be8a7398f 410 SUPERFAMILY SSF111369 60 304 1.44E-23 T 14-10-2018 AMBLS11_10440 b5fd2e04f5ab27986d60853be8a7398f 410 Gene3D G3DSA:1.10.287.470 106 180 1.6E-55 T 14-10-2018 AMBLS11_10440 b5fd2e04f5ab27986d60853be8a7398f 410 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 378 7.4E-45 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_10440 b5fd2e04f5ab27986d60853be8a7398f 410 Gene3D G3DSA:2.40.420.20 312 377 1.6E-55 T 14-10-2018 AMBLS11_10440 b5fd2e04f5ab27986d60853be8a7398f 410 Gene3D G3DSA:2.40.50.100 69 214 1.6E-55 T 14-10-2018 AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 Gene3D G3DSA:3.40.50.720 2 263 2.2E-96 T 14-10-2018 AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 7.9E-35 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 SUPERFAMILY SSF55347 126 235 3.05E-34 T 14-10-2018 AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 Gene3D G3DSA:3.30.360.10 126 233 2.2E-96 T 14-10-2018 AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 PIRSF PIRSF000161 1 267 1.1E-84 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 263 4.8E-42 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 264 1.3E-87 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 SUPERFAMILY SSF51735 1 265 1.4E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 149 166 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_06700 b2cb969f5ebf425744fb074e5d82584d 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 264 33.294 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_10050 d59c0e319c4daa20631976c050a492e4 332 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 17 331 54.574 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AMBLS11_10050 d59c0e319c4daa20631976c050a492e4 332 SUPERFAMILY SSF53335 96 331 6.18E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_10050 d59c0e319c4daa20631976c050a492e4 332 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 330 2.8E-149 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AMBLS11_10050 d59c0e319c4daa20631976c050a492e4 332 Pfam PF08003 Protein of unknown function (DUF1698) 13 331 1.1E-148 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AMBLS11_10050 d59c0e319c4daa20631976c050a492e4 332 Gene3D G3DSA:3.40.50.150 74 319 1.1E-26 T 14-10-2018 AMBLS11_01015 2531eb1a3fc51b447aa1c26540db4757 196 Pfam PF02545 Maf-like protein 5 191 2.1E-54 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMBLS11_01015 2531eb1a3fc51b447aa1c26540db4757 196 SUPERFAMILY SSF52972 2 190 1.24E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMBLS11_01015 2531eb1a3fc51b447aa1c26540db4757 196 Gene3D G3DSA:3.90.950.10 1 195 2.3E-65 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMBLS11_01015 2531eb1a3fc51b447aa1c26540db4757 196 Hamap MF_00528 Septum formation protein Maf [maf]. 4 196 31.158 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMBLS11_01015 2531eb1a3fc51b447aa1c26540db4757 196 PIRSF PIRSF006305 1 195 2.1E-52 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMBLS11_01015 2531eb1a3fc51b447aa1c26540db4757 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 189 1.0E-50 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMBLS11_08790 26a8b57ecb78926e4dd7df6a6a4bdc0a 529 Gene3D G3DSA:3.30.1400.10 386 525 4.9E-50 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AMBLS11_08790 26a8b57ecb78926e4dd7df6a6a4bdc0a 529 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 519 23.367 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AMBLS11_08790 26a8b57ecb78926e4dd7df6a6a4bdc0a 529 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 389 515 1.5E-45 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AMBLS11_08790 26a8b57ecb78926e4dd7df6a6a4bdc0a 529 SMART SM00771 387 517 9.3E-57 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AMBLS11_08790 26a8b57ecb78926e4dd7df6a6a4bdc0a 529 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 390 519 4.0E-64 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AMBLS11_08790 26a8b57ecb78926e4dd7df6a6a4bdc0a 529 SUPERFAMILY SSF64383 389 523 7.32E-48 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AMBLS11_08790 26a8b57ecb78926e4dd7df6a6a4bdc0a 529 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 262 517 1.2E-44 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AMBLS11_09680 dc8b60c7ac68efc87a537d33fb861a59 181 Pfam PF08747 Domain of unknown function (DUF1788) 99 174 2.0E-7 T 14-10-2018 IPR014858 Protein of unknown function DUF1788 AMBLS11_12845 d85f96e3e0a96403ca32993b59c8483d 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 201 5.4E-59 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AMBLS11_12845 d85f96e3e0a96403ca32993b59c8483d 206 PIRSF PIRSF006170 1 206 4.6E-57 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 AMBLS11_12845 d85f96e3e0a96403ca32993b59c8483d 206 SUPERFAMILY SSF48452 91 195 1.58E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12845 d85f96e3e0a96403ca32993b59c8483d 206 Gene3D G3DSA:1.25.40.10 37 206 3.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12845 d85f96e3e0a96403ca32993b59c8483d 206 SMART SM00028 87 120 430.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_12845 d85f96e3e0a96403ca32993b59c8483d 206 SMART SM00028 157 190 0.0056 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_18295 ace53d915e99edc2e11ea91601f86637 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMBLS11_18295 ace53d915e99edc2e11ea91601f86637 462 Gene3D G3DSA:3.40.309.10 236 426 2.3E-148 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMBLS11_18295 ace53d915e99edc2e11ea91601f86637 462 Pfam PF00171 Aldehyde dehydrogenase family 3 454 2.4E-139 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMBLS11_18295 ace53d915e99edc2e11ea91601f86637 462 SUPERFAMILY SSF53720 3 456 2.49E-142 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_18295 ace53d915e99edc2e11ea91601f86637 462 Gene3D G3DSA:3.40.605.10 3 454 2.3E-148 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_11475 b31585771088c78a755b7d234339867a 443 PIRSF PIRSF001563 20 442 1.8E-99 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AMBLS11_11475 b31585771088c78a755b7d234339867a 443 Pfam PF08245 Mur ligase middle domain 69 216 8.5E-12 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMBLS11_11475 b31585771088c78a755b7d234339867a 443 TIGRFAM TIGR01499 folC: bifunctional protein FolC 47 439 1.4E-96 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AMBLS11_11475 b31585771088c78a755b7d234339867a 443 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 164 179 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AMBLS11_11475 b31585771088c78a755b7d234339867a 443 SUPERFAMILY SSF53244 309 440 2.38E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_11475 b31585771088c78a755b7d234339867a 443 Gene3D G3DSA:3.40.1190.10 15 309 1.4E-88 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_11475 b31585771088c78a755b7d234339867a 443 SUPERFAMILY SSF53623 26 306 4.21E-80 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_11475 b31585771088c78a755b7d234339867a 443 Gene3D G3DSA:3.90.190.20 310 442 7.7E-28 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_15620 2b9a56ec526cf91f598547a99a412501 519 Pfam PF13454 FAD-NAD(P)-binding 10 175 4.6E-19 T 14-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain AMBLS11_15620 2b9a56ec526cf91f598547a99a412501 519 SUPERFAMILY SSF51905 8 223 7.9E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_02590 7daffa37523fadfb61b0fa943de7db4b 684 SUPERFAMILY SSF48435 52 503 9.81E-105 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AMBLS11_02590 7daffa37523fadfb61b0fa943de7db4b 684 Gene3D G3DSA:1.25.20.10 49 413 1.6E-94 T 14-10-2018 AMBLS11_02590 7daffa37523fadfb61b0fa943de7db4b 684 Pfam PF14718 Soluble lytic murein transglycosylase L domain 432 498 2.2E-18 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AMBLS11_02590 7daffa37523fadfb61b0fa943de7db4b 684 SUPERFAMILY SSF53955 472 647 3.03E-41 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMBLS11_02590 7daffa37523fadfb61b0fa943de7db4b 684 Pfam PF01464 Transglycosylase SLT domain 509 615 7.7E-26 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 AMBLS11_02590 7daffa37523fadfb61b0fa943de7db4b 684 Gene3D G3DSA:1.10.530.10 499 660 5.7E-44 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 Gene3D G3DSA:3.30.70.1430 40 827 0.0 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 SUPERFAMILY SSF82693 575 681 5.75E-26 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 Gene3D G3DSA:1.20.1640.10 523 1033 0.0 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 Gene3D G3DSA:3.30.70.1440 679 876 0.0 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 Gene3D G3DSA:1.20.1640.10 10 522 0.0 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 SUPERFAMILY SSF82714 187 274 6.02E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 SUPERFAMILY SSF82693 41 134 2.14E-27 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.7E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.7E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.7E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.7E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.7E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 1.7E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 1.7E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 SUPERFAMILY SSF82693 138 332 1.22E-28 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 SUPERFAMILY SSF82866 841 1037 1.7E-44 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 Gene3D G3DSA:3.30.2090.10 731 819 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 SUPERFAMILY SSF82866 298 498 1.83E-52 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 Gene3D G3DSA:3.30.70.1430 577 678 0.0 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1038 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 Gene3D G3DSA:3.30.70.1320 135 334 0.0 T 14-10-2018 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 Pfam PF00873 AcrB/AcrD/AcrF family 3 1036 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 SUPERFAMILY SSF82714 732 817 3.66E-20 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_13905 8190e9980a277bdccb239ccc9e260e9f 1040 SUPERFAMILY SSF82693 682 867 2.88E-25 T 14-10-2018 AMBLS11_13300 85b162c186cea92d442764de5e3c6657 341 Gene3D G3DSA:3.40.50.2300 195 320 3.2E-24 T 14-10-2018 AMBLS11_13300 85b162c186cea92d442764de5e3c6657 341 Gene3D G3DSA:3.40.50.2300 66 181 3.1E-18 T 14-10-2018 AMBLS11_13300 85b162c186cea92d442764de5e3c6657 341 Gene3D G3DSA:1.10.260.40 1 64 2.3E-16 T 14-10-2018 AMBLS11_13300 85b162c186cea92d442764de5e3c6657 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 1.3E-8 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_13300 85b162c186cea92d442764de5e3c6657 341 SUPERFAMILY SSF47413 5 64 1.25E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_13300 85b162c186cea92d442764de5e3c6657 341 Pfam PF13377 Periplasmic binding protein-like domain 203 332 6.9E-21 T 14-10-2018 AMBLS11_13300 85b162c186cea92d442764de5e3c6657 341 SUPERFAMILY SSF53822 79 338 2.94E-35 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_13300 85b162c186cea92d442764de5e3c6657 341 SMART SM00354 5 76 5.2E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_18910 09cb2e7185903ff02ef03ac2c40c665d 199 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 3.0E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_18910 09cb2e7185903ff02ef03ac2c40c665d 199 Gene3D G3DSA:3.40.30.10 1 80 2.9E-24 T 14-10-2018 AMBLS11_18910 09cb2e7185903ff02ef03ac2c40c665d 199 SUPERFAMILY SSF52833 1 78 1.6E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_18910 09cb2e7185903ff02ef03ac2c40c665d 199 SUPERFAMILY SSF47616 72 196 1.2E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_18910 09cb2e7185903ff02ef03ac2c40c665d 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 189 3.8E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMBLS11_18910 09cb2e7185903ff02ef03ac2c40c665d 199 Gene3D G3DSA:1.20.1050.10 81 194 2.0E-35 T 14-10-2018 AMBLS11_11410 c2d005e3aa6b196afd4f9864e8a8ae7c 329 SMART SM00829 12 327 6.9E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_11410 c2d005e3aa6b196afd4f9864e8a8ae7c 329 Gene3D G3DSA:3.90.180.10 21 328 3.3E-119 T 14-10-2018 AMBLS11_11410 c2d005e3aa6b196afd4f9864e8a8ae7c 329 Pfam PF00107 Zinc-binding dehydrogenase 162 271 9.1E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMBLS11_11410 c2d005e3aa6b196afd4f9864e8a8ae7c 329 Gene3D G3DSA:3.40.50.720 129 297 3.3E-119 T 14-10-2018 AMBLS11_11410 c2d005e3aa6b196afd4f9864e8a8ae7c 329 SUPERFAMILY SSF50129 5 147 1.22E-38 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_11410 c2d005e3aa6b196afd4f9864e8a8ae7c 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 1.5E-4 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_11410 c2d005e3aa6b196afd4f9864e8a8ae7c 329 SUPERFAMILY SSF51735 119 297 9.24E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11410 c2d005e3aa6b196afd4f9864e8a8ae7c 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 329 1.6E-137 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI AMBLS11_02005 b05e112d184d0c9d0fb9458985b9df96 355 SUPERFAMILY SSF56796 4 354 5.5E-114 T 14-10-2018 AMBLS11_02005 b05e112d184d0c9d0fb9458985b9df96 355 Pfam PF01761 3-dehydroquinate synthase 65 323 2.3E-107 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMBLS11_02005 b05e112d184d0c9d0fb9458985b9df96 355 Gene3D G3DSA:3.40.50.1970 1 170 1.6E-63 T 14-10-2018 AMBLS11_02005 b05e112d184d0c9d0fb9458985b9df96 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 71.1 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMBLS11_02005 b05e112d184d0c9d0fb9458985b9df96 355 PIRSF PIRSF001455 8 353 1.7E-107 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMBLS11_02005 b05e112d184d0c9d0fb9458985b9df96 355 Gene3D G3DSA:1.20.1090.10 171 355 2.1E-67 T 14-10-2018 AMBLS11_02005 b05e112d184d0c9d0fb9458985b9df96 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 348 8.8E-117 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMBLS11_18960 eacb26cca391eea2deec878047608828 277 Pfam PF00119 ATP synthase A chain 48 271 2.0E-52 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18960 eacb26cca391eea2deec878047608828 277 ProSitePatterns PS00449 ATP synthase a subunit signature. 214 223 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18960 eacb26cca391eea2deec878047608828 277 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 277 15.514 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18960 eacb26cca391eea2deec878047608828 277 SUPERFAMILY SSF81336 96 271 7.06E-40 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18960 eacb26cca391eea2deec878047608828 277 Gene3D G3DSA:1.20.120.220 95 277 5.6E-54 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18960 eacb26cca391eea2deec878047608828 277 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 271 1.1E-40 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_08675 41064163d2e7e86807c45a93b4454066 339 Gene3D G3DSA:3.40.1350.10 25 111 1.2E-8 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMBLS11_06450 3ccbcc6d8210dcd897106c358a419ed1 312 Gene3D G3DSA:1.20.225.30 242 311 2.0E-22 T 14-10-2018 AMBLS11_06450 3ccbcc6d8210dcd897106c358a419ed1 312 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 54.198 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AMBLS11_06450 3ccbcc6d8210dcd897106c358a419ed1 312 PIRSF PIRSF006621 1 311 5.0E-78 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMBLS11_06450 3ccbcc6d8210dcd897106c358a419ed1 312 SUPERFAMILY SSF51395 1 307 1.46E-69 T 14-10-2018 AMBLS11_06450 3ccbcc6d8210dcd897106c358a419ed1 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMBLS11_06450 3ccbcc6d8210dcd897106c358a419ed1 312 Pfam PF01207 Dihydrouridine synthase (Dus) 4 294 2.4E-73 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMBLS11_06450 3ccbcc6d8210dcd897106c358a419ed1 312 Gene3D G3DSA:3.20.20.70 1 241 1.6E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_02215 6b5bf3e92fa93da86bfafcccb72f45e3 181 Gene3D G3DSA:3.30.420.10 1 181 9.3E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_02215 6b5bf3e92fa93da86bfafcccb72f45e3 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.516 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 AMBLS11_02215 6b5bf3e92fa93da86bfafcccb72f45e3 181 SMART SM00479 7 180 3.1E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_02215 6b5bf3e92fa93da86bfafcccb72f45e3 181 Pfam PF00929 Exonuclease 9 170 2.0E-35 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_02215 6b5bf3e92fa93da86bfafcccb72f45e3 181 SUPERFAMILY SSF53098 4 179 1.59E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_08475 18e3fbfe54414996af221a2d38ad62d0 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 3.9E-38 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMBLS11_08475 18e3fbfe54414996af221a2d38ad62d0 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.645 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMBLS11_08475 18e3fbfe54414996af221a2d38ad62d0 105 Pfam PF02410 Ribosomal silencing factor during starvation 13 104 1.1E-26 T 14-10-2018 AMBLS11_08475 18e3fbfe54414996af221a2d38ad62d0 105 Gene3D G3DSA:3.30.460.10 1 105 3.5E-37 T 14-10-2018 AMBLS11_08475 18e3fbfe54414996af221a2d38ad62d0 105 SUPERFAMILY SSF81301 2 105 7.36E-38 T 14-10-2018 AMBLS11_11365 ecf8b4d1cb618389f0e0855bfa2ff30c 163 SUPERFAMILY SSF50891 1 161 4.38E-61 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_11365 ecf8b4d1cb618389f0e0855bfa2ff30c 163 Gene3D G3DSA:2.40.100.10 1 163 1.0E-68 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_11365 ecf8b4d1cb618389f0e0855bfa2ff30c 163 PIRSF PIRSF001467 1 162 2.5E-28 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AMBLS11_11365 ecf8b4d1cb618389f0e0855bfa2ff30c 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 3.9E-14 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMBLS11_11365 ecf8b4d1cb618389f0e0855bfa2ff30c 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 3.9E-14 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMBLS11_11365 ecf8b4d1cb618389f0e0855bfa2ff30c 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 3.9E-14 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMBLS11_11365 ecf8b4d1cb618389f0e0855bfa2ff30c 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AMBLS11_11365 ecf8b4d1cb618389f0e0855bfa2ff30c 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 160 7.7E-49 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMBLS11_00750 f4cbd4b0eed2f0251f1cc1277a6d0924 304 SUPERFAMILY SSF103481 44 148 6.67E-13 T 14-10-2018 AMBLS11_00750 f4cbd4b0eed2f0251f1cc1277a6d0924 304 TIGRFAM TIGR00688 rarD: protein RarD 11 262 1.0E-76 T 14-10-2018 IPR004626 RarD protein GO:0005887 AMBLS11_00750 f4cbd4b0eed2f0251f1cc1277a6d0924 304 Pfam PF00892 EamA-like transporter family 10 146 6.3E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_00750 f4cbd4b0eed2f0251f1cc1277a6d0924 304 SUPERFAMILY SSF103481 183 286 1.22E-6 T 14-10-2018 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 4.9E-35 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.8E-41 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 7.0E-38 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 Gene3D G3DSA:3.10.150.10 248 366 2.5E-41 T 14-10-2018 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 SUPERFAMILY SSF55979 245 366 2.9E-38 T 14-10-2018 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 SUPERFAMILY SSF55979 1 118 7.39E-30 T 14-10-2018 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 6.7E-113 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 PIRSF PIRSF000804 1 366 4.8E-122 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 Gene3D G3DSA:3.10.150.10 1 123 4.6E-42 T 14-10-2018 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 SMART SM00480 17 362 7.8E-153 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 Gene3D G3DSA:3.10.150.10 125 247 1.5E-36 T 14-10-2018 AMBLS11_00010 6bb60b628db17ee6afffb1d679229b1e 366 SUPERFAMILY SSF55979 125 244 2.02E-29 T 14-10-2018 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 2.2E-47 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 SUPERFAMILY SSF53901 1 259 4.32E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 SUPERFAMILY SSF53901 262 386 6.57E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.984 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 7.1E-136 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 7.7E-209 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 9.3E-78 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 PIRSF PIRSF000429 1 387 2.2E-126 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 Gene3D G3DSA:3.40.47.10 134 381 6.9E-146 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_02580 f48e3c15e745991c815cbebb6762ada5 387 Gene3D G3DSA:3.40.47.10 4 267 6.9E-146 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_04120 08a9c87531ea79c97eec01695f604666 376 PIRSF PIRSF000294 21 372 7.3E-64 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AMBLS11_04120 08a9c87531ea79c97eec01695f604666 376 Pfam PF03150 Di-haem cytochrome c peroxidase 63 210 2.9E-38 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AMBLS11_04120 08a9c87531ea79c97eec01695f604666 376 Gene3D G3DSA:1.10.760.10 200 365 9.4E-84 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_04120 08a9c87531ea79c97eec01695f604666 376 Gene3D G3DSA:1.10.760.10 58 199 9.4E-84 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_04120 08a9c87531ea79c97eec01695f604666 376 TIGRFAM TIGR04039 MXAN_0977_Heme2: di-heme enzyme, MXAN_0977 family 53 370 2.0E-139 T 14-10-2018 IPR023929 Di-heme enzyme, MXAN0977 AMBLS11_04120 08a9c87531ea79c97eec01695f604666 376 SUPERFAMILY SSF46626 190 363 9.42E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_04120 08a9c87531ea79c97eec01695f604666 376 SUPERFAMILY SSF46626 40 201 3.06E-37 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_05505 b71249b3c2c3882f7a2803c85fa3c2bc 384 Pfam PF00487 Fatty acid desaturase 94 364 5.8E-29 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AMBLS11_18260 bbb1f28fc7d20d9d754557fa95389ab0 208 Gene3D G3DSA:3.10.610.10 35 145 8.7E-37 T 14-10-2018 AMBLS11_18260 bbb1f28fc7d20d9d754557fa95389ab0 208 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 23 1.4E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18260 bbb1f28fc7d20d9d754557fa95389ab0 208 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 1.1E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18260 bbb1f28fc7d20d9d754557fa95389ab0 208 Pfam PF11612 Type II secretion system (T2SS), protein J 55 200 3.7E-38 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AMBLS11_18260 bbb1f28fc7d20d9d754557fa95389ab0 208 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18260 bbb1f28fc7d20d9d754557fa95389ab0 208 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 3 202 5.2E-55 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AMBLS11_18260 bbb1f28fc7d20d9d754557fa95389ab0 208 SUPERFAMILY SSF54523 36 204 4.71E-43 T 14-10-2018 AMBLS11_07175 c1e9076f103df0e7e0c7c523ca35110d 214 Gene3D G3DSA:1.10.357.10 66 205 1.5E-43 T 14-10-2018 AMBLS11_07175 c1e9076f103df0e7e0c7c523ca35110d 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 8.9E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_07175 c1e9076f103df0e7e0c7c523ca35110d 214 SUPERFAMILY SSF48498 83 206 1.48E-34 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMBLS11_07175 c1e9076f103df0e7e0c7c523ca35110d 214 Pfam PF08362 YcdC-like protein, C-terminal region 66 206 1.7E-47 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AMBLS11_07175 c1e9076f103df0e7e0c7c523ca35110d 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 4.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_07175 c1e9076f103df0e7e0c7c523ca35110d 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 4.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_07175 c1e9076f103df0e7e0c7c523ca35110d 214 SUPERFAMILY SSF46689 13 86 4.64E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_07175 c1e9076f103df0e7e0c7c523ca35110d 214 Gene3D G3DSA:1.10.10.60 14 65 1.0E-19 T 14-10-2018 AMBLS11_16035 9768a9809445742e81c676511ac9259a 208 SUPERFAMILY SSF53098 4 181 1.38E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_16035 9768a9809445742e81c676511ac9259a 208 Gene3D G3DSA:3.30.420.10 7 182 2.7E-25 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_16035 9768a9809445742e81c676511ac9259a 208 SMART SM00479 10 183 6.3E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_16035 9768a9809445742e81c676511ac9259a 208 Pfam PF00929 Exonuclease 14 174 9.9E-7 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMBLS11_07880 63b16278538f834f694104d11f0e154f 341 Gene3D G3DSA:3.40.718.10 2 340 6.8E-128 T 14-10-2018 AMBLS11_07880 63b16278538f834f694104d11f0e154f 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 336 1.6E-111 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMBLS11_07880 63b16278538f834f694104d11f0e154f 341 PIRSF PIRSF002465 2 340 8.3E-125 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMBLS11_07880 63b16278538f834f694104d11f0e154f 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 341 136.82 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMBLS11_07880 63b16278538f834f694104d11f0e154f 341 Pfam PF02504 Fatty acid synthesis protein 5 324 4.0E-106 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AMBLS11_07880 63b16278538f834f694104d11f0e154f 341 SUPERFAMILY SSF53659 4 337 1.64E-108 T 14-10-2018 AMBLS11_15115 5b8e478d7f55831bd4cd8cf1d4319b6c 390 SUPERFAMILY SSF53901 233 387 1.54E-28 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_15115 5b8e478d7f55831bd4cd8cf1d4319b6c 390 SUPERFAMILY SSF53901 4 234 2.61E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_15115 5b8e478d7f55831bd4cd8cf1d4319b6c 390 Gene3D G3DSA:3.40.47.10 3 390 1.5E-108 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_15115 5b8e478d7f55831bd4cd8cf1d4319b6c 390 Pfam PF00108 Thiolase, N-terminal domain 4 183 2.1E-16 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMBLS11_15115 5b8e478d7f55831bd4cd8cf1d4319b6c 390 PIRSF PIRSF000429 1 388 5.1E-60 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMBLS11_15115 5b8e478d7f55831bd4cd8cf1d4319b6c 390 Pfam PF02803 Thiolase, C-terminal domain 267 368 1.4E-8 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMBLS11_16030 f5d14074390f936a31deaf1e0b879c4c 328 SUPERFAMILY SSF52172 13 155 9.96E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_16030 f5d14074390f936a31deaf1e0b879c4c 328 Pfam PF00072 Response regulator receiver domain 16 126 1.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16030 f5d14074390f936a31deaf1e0b879c4c 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 303 4.8E-40 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_16030 f5d14074390f936a31deaf1e0b879c4c 328 SMART SM00267 132 307 7.2E-47 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_16030 f5d14074390f936a31deaf1e0b879c4c 328 SMART SM00448 14 126 3.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16030 f5d14074390f936a31deaf1e0b879c4c 328 Gene3D G3DSA:3.40.50.2300 10 134 5.6E-34 T 14-10-2018 AMBLS11_16030 f5d14074390f936a31deaf1e0b879c4c 328 SUPERFAMILY SSF55073 148 305 4.16E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_16030 f5d14074390f936a31deaf1e0b879c4c 328 Gene3D G3DSA:3.30.70.270 135 306 1.2E-47 T 14-10-2018 AMBLS11_16030 f5d14074390f936a31deaf1e0b879c4c 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 306 5.8E-40 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05540 08d85b245d8a4462dc35828fbfb10a94 257 Pfam PF00849 RNA pseudouridylate synthase 12 171 5.9E-26 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_05540 08d85b245d8a4462dc35828fbfb10a94 257 Gene3D G3DSA:3.30.2350.10 1 214 1.3E-47 T 14-10-2018 AMBLS11_05540 08d85b245d8a4462dc35828fbfb10a94 257 SUPERFAMILY SSF55120 4 207 8.8E-45 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_01670 9c79ac5cff738cd67d599c79d21608d6 561 SUPERFAMILY SSF54373 350 497 5.1E-54 T 14-10-2018 AMBLS11_01670 9c79ac5cff738cd67d599c79d21608d6 561 SUPERFAMILY SSF51905 1 557 2.07E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_01670 9c79ac5cff738cd67d599c79d21608d6 561 Gene3D G3DSA:3.50.50.60 237 341 3.1E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_01670 9c79ac5cff738cd67d599c79d21608d6 561 Gene3D G3DSA:3.50.50.60 456 556 9.5E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_01670 9c79ac5cff738cd67d599c79d21608d6 561 Pfam PF00732 GMC oxidoreductase 71 312 1.4E-14 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_01670 9c79ac5cff738cd67d599c79d21608d6 561 Gene3D G3DSA:3.50.50.60 1 170 1.3E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_01670 9c79ac5cff738cd67d599c79d21608d6 561 Pfam PF05199 GMC oxidoreductase 425 548 2.7E-20 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_08805 edd8759180567e065671699ba87521b3 806 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 228 440 1.9E-19 T 14-10-2018 IPR004477 ComEC/Rec2-related protein AMBLS11_08805 edd8759180567e065671699ba87521b3 806 Pfam PF00753 Metallo-beta-lactamase superfamily 551 692 4.7E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_08805 edd8759180567e065671699ba87521b3 806 Pfam PF03772 Competence protein 206 513 3.4E-40 T 14-10-2018 IPR004477 ComEC/Rec2-related protein AMBLS11_08805 edd8759180567e065671699ba87521b3 806 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 302 767 1.2E-74 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AMBLS11_08805 edd8759180567e065671699ba87521b3 806 SMART SM00849 553 716 5.5E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_08805 edd8759180567e065671699ba87521b3 806 Gene3D G3DSA:3.60.15.10 544 783 1.5E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_08805 edd8759180567e065671699ba87521b3 806 SUPERFAMILY SSF56281 545 788 5.42E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 Gene3D G3DSA:3.90.228.20 208 507 1.0E-202 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 Gene3D G3DSA:2.170.8.10 34 323 1.0E-202 T 14-10-2018 AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 Pfam PF01293 Phosphoenolpyruvate carboxykinase 17 474 1.7E-194 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 8 520 51.687 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 SUPERFAMILY SSF53795 207 518 2.38E-128 T 14-10-2018 AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 SUPERFAMILY SSF68923 17 206 1.03E-70 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 18 518 8.7E-190 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 PIRSF PIRSF006294 1 520 9.8E-215 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 Gene3D G3DSA:3.40.449.10 24 207 1.0E-202 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMBLS11_18210 d8b8f2fcb8b31bf81b849a13cb3af4de 520 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 244 259 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMBLS11_12655 d3b1a0309f35e919ee75ee8e103f8383 182 Pfam PF01252 Signal peptidase (SPase) II 16 156 8.1E-43 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMBLS11_12655 d3b1a0309f35e919ee75ee8e103f8383 182 TIGRFAM TIGR00077 lspA: signal peptidase II 4 163 4.5E-47 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMBLS11_12655 d3b1a0309f35e919ee75ee8e103f8383 182 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMBLS11_12655 d3b1a0309f35e919ee75ee8e103f8383 182 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 3.7E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMBLS11_12655 d3b1a0309f35e919ee75ee8e103f8383 182 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 3.7E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMBLS11_12655 d3b1a0309f35e919ee75ee8e103f8383 182 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 3.7E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMBLS11_12655 d3b1a0309f35e919ee75ee8e103f8383 182 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.943 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMBLS11_13690 34c2914808e45508554e7d4293b8dae0 511 Gene3D G3DSA:2.170.130.10 113 242 6.9E-5 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_13690 34c2914808e45508554e7d4293b8dae0 511 Pfam PF13620 Carboxypeptidase regulatory-like domain 34 113 1.3E-11 T 14-10-2018 AMBLS11_13690 34c2914808e45508554e7d4293b8dae0 511 Gene3D G3DSA:2.60.40.1120 34 112 5.3E-9 T 14-10-2018 AMBLS11_13690 34c2914808e45508554e7d4293b8dae0 511 Pfam PF07715 TonB-dependent Receptor Plug Domain 131 241 9.0E-5 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_13690 34c2914808e45508554e7d4293b8dae0 511 SUPERFAMILY SSF56935 119 511 2.7E-16 T 14-10-2018 AMBLS11_13690 34c2914808e45508554e7d4293b8dae0 511 SUPERFAMILY SSF49464 36 118 2.43E-8 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AMBLS11_09730 5a08ff864ca1498583d11e3299b60fd0 307 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 18 272 1.2E-37 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMBLS11_09730 5a08ff864ca1498583d11e3299b60fd0 307 PIRSF PIRSF006157 12 293 1.5E-77 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AMBLS11_09730 5a08ff864ca1498583d11e3299b60fd0 307 Gene3D G3DSA:3.40.830.10 4 287 2.9E-77 T 14-10-2018 AMBLS11_09730 5a08ff864ca1498583d11e3299b60fd0 307 SUPERFAMILY SSF53213 17 272 6.15E-71 T 14-10-2018 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 449 3.3E-180 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 Gene3D G3DSA:3.30.300.20 369 451 1.4E-20 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 SUPERFAMILY SSF52540 4 190 2.5E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 SUPERFAMILY SSF52540 137 455 2.25E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 Gene3D G3DSA:3.40.50.300 2 159 7.2E-43 T 14-10-2018 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 Pfam PF01926 50S ribosome-binding GTPase 196 313 5.6E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.6E-28 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 369 449 2.2E-26 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 SMART SM00382 192 339 0.42 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 SMART SM00382 1 170 1.1 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 194 359 6.7E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 154 2.5E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 PIRSF PIRSF006485 1 457 3.7E-180 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 Hamap MF_00195 GTPase Der [der]. 2 452 39.179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.2E-11 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.2E-11 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 2.2E-11 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_12835 c4567089afe1d5eefa4c05299bef728a 481 Gene3D G3DSA:3.40.50.300 188 365 1.6E-48 T 14-10-2018 AMBLS11_02935 69f950953eb8e554406acf4055dfc1a5 106 PIRSF PIRSF003113 1 100 1.9E-30 T 14-10-2018 IPR002634 BolA protein AMBLS11_02935 69f950953eb8e554406acf4055dfc1a5 106 Gene3D G3DSA:3.30.300.90 1 89 5.3E-31 T 14-10-2018 AMBLS11_02935 69f950953eb8e554406acf4055dfc1a5 106 Pfam PF01722 BolA-like protein 11 84 3.9E-28 T 14-10-2018 IPR002634 BolA protein AMBLS11_02935 69f950953eb8e554406acf4055dfc1a5 106 SUPERFAMILY SSF82657 4 88 2.62E-27 T 14-10-2018 IPR036065 BolA-like superfamily AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 Gene3D G3DSA:1.10.540.10 10 159 4.3E-17 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 SUPERFAMILY SSF47203 286 474 4.03E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 157 7.2E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 Gene3D G3DSA:2.40.110.10 160 286 6.6E-28 T 14-10-2018 AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 466 592 1.3E-34 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 7.9E-15 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 SUPERFAMILY SSF56645 39 278 5.5E-56 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 Gene3D G3DSA:1.20.140.10 287 460 2.9E-42 T 14-10-2018 AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 447 4.1E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_07990 be54b0b5927834c8be8316f59bb343be 599 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 2.2E-5 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AMBLS11_05085 a9dbf9ab37dbfff56dc45d69a8e3e241 163 Pfam PF01584 CheW-like domain 19 155 4.0E-42 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_05085 a9dbf9ab37dbfff56dc45d69a8e3e241 163 SMART SM00260 15 152 3.4E-51 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_05085 a9dbf9ab37dbfff56dc45d69a8e3e241 163 SUPERFAMILY SSF50341 12 158 5.49E-44 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMBLS11_05085 a9dbf9ab37dbfff56dc45d69a8e3e241 163 Gene3D G3DSA:2.40.50.180 38 147 3.4E-43 T 14-10-2018 AMBLS11_05085 a9dbf9ab37dbfff56dc45d69a8e3e241 163 Gene3D G3DSA:2.30.30.40 21 146 3.4E-43 T 14-10-2018 AMBLS11_06265 7e34b3d641536af95d1031534963838e 382 Pfam PF13533 Biotin-lipoyl like 66 117 5.6E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMBLS11_06265 7e34b3d641536af95d1031534963838e 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 369 3.7E-40 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_06265 7e34b3d641536af95d1031534963838e 382 Gene3D G3DSA:1.10.287.470 103 177 5.6E-44 T 14-10-2018 AMBLS11_06265 7e34b3d641536af95d1031534963838e 382 Gene3D G3DSA:2.40.30.170 54 303 5.6E-44 T 14-10-2018 AMBLS11_06265 7e34b3d641536af95d1031534963838e 382 Gene3D G3DSA:2.40.50.100 66 211 5.6E-44 T 14-10-2018 AMBLS11_06265 7e34b3d641536af95d1031534963838e 382 SUPERFAMILY SSF111369 57 277 8.24E-23 T 14-10-2018 AMBLS11_06265 7e34b3d641536af95d1031534963838e 382 Gene3D G3DSA:2.40.420.20 304 367 5.6E-44 T 14-10-2018 AMBLS11_06265 7e34b3d641536af95d1031534963838e 382 Pfam PF13437 HlyD family secretion protein 180 283 5.8E-11 T 14-10-2018 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 SUPERFAMILY SSF51735 2 175 1.98E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 Gene3D G3DSA:3.40.50.720 4 327 8.5E-131 T 14-10-2018 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 SMART SM00846 2 154 1.6E-74 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 PIRSF PIRSF000149 1 336 3.3E-128 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 3.7E-56 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 104 1.0E-35 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 327 6.5E-167 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 Gene3D G3DSA:3.30.360.10 153 317 8.5E-131 T 14-10-2018 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 336 64.783 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 SUPERFAMILY SSF55347 154 316 1.31E-59 T 14-10-2018 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 2.5E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 2.5E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 2.5E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 2.5E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03775 30b1b907d36775a9503475088b3f66e1 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 2.5E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 SMART SM01130 1 290 4.3E-125 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 4.2E-94 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 61.07 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 Gene3D G3DSA:3.20.20.70 1 292 1.8E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.5E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.5E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.5E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.5E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 288 2.1E-105 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 SUPERFAMILY SSF51569 2 289 2.62E-92 T 14-10-2018 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 PIRSF PIRSF001365 1 294 1.7E-82 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_09955 f117e364235a7a6f50a27b06d8c4d2bd 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMBLS11_12515 955d3a20ea60b2127548aa8d66d76247 199 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 8 180 5.7E-31 T 14-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AMBLS11_12515 955d3a20ea60b2127548aa8d66d76247 199 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 8 186 2.6E-37 T 14-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AMBLS11_11705 6b7facf802c4bb3f441b2f66059af483 222 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 19 216 3.2E-46 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMBLS11_11705 6b7facf802c4bb3f441b2f66059af483 222 Gene3D G3DSA:3.90.850.10 1 222 7.8E-65 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMBLS11_11705 6b7facf802c4bb3f441b2f66059af483 222 SUPERFAMILY SSF56529 15 220 1.03E-59 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMBLS11_18185 c3eb27b9446c7498f3fbebdfd4b78dc3 378 Pfam PF11017 Protein of unknown function (DUF2855) 43 366 5.4E-97 T 14-10-2018 IPR021276 Protein of unknown function DUF2855 AMBLS11_07490 fb0db4d1dc35cf633e4ee1e30abc9858 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 163 325 9.4E-81 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMBLS11_07490 fb0db4d1dc35cf633e4ee1e30abc9858 326 SUPERFAMILY SSF46589 13 98 1.36E-21 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMBLS11_07490 fb0db4d1dc35cf633e4ee1e30abc9858 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 86 3.9E-24 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMBLS11_07490 fb0db4d1dc35cf633e4ee1e30abc9858 326 SUPERFAMILY SSF55681 91 326 5.97E-84 T 14-10-2018 AMBLS11_07490 fb0db4d1dc35cf633e4ee1e30abc9858 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 7.7E-106 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AMBLS11_07490 fb0db4d1dc35cf633e4ee1e30abc9858 326 Gene3D G3DSA:3.30.930.10 6 326 4.3E-126 T 14-10-2018 AMBLS11_07490 fb0db4d1dc35cf633e4ee1e30abc9858 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 48.464 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AMBLS11_03980 977402402803384706327f724df5c839 406 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 6 404 35.756 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AMBLS11_03980 977402402803384706327f724df5c839 406 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 3.5E-16 T 14-10-2018 AMBLS11_03980 977402402803384706327f724df5c839 406 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 3.5E-16 T 14-10-2018 AMBLS11_03980 977402402803384706327f724df5c839 406 PRINTS PR00173 Glutamate-aspartate symporter signature 223 242 3.5E-16 T 14-10-2018 AMBLS11_03980 977402402803384706327f724df5c839 406 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 3.5E-16 T 14-10-2018 AMBLS11_03980 977402402803384706327f724df5c839 406 PRINTS PR00173 Glutamate-aspartate symporter signature 12 32 3.5E-16 T 14-10-2018 AMBLS11_03980 977402402803384706327f724df5c839 406 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 3.5E-16 T 14-10-2018 AMBLS11_03980 977402402803384706327f724df5c839 406 Gene3D G3DSA:1.10.3860.10 8 405 1.1E-72 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMBLS11_03980 977402402803384706327f724df5c839 406 SUPERFAMILY SSF118215 18 399 2.48E-96 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMBLS11_03980 977402402803384706327f724df5c839 406 Pfam PF00375 Sodium:dicarboxylate symporter family 18 397 8.6E-68 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMBLS11_16770 3e790c62490f9ced83d8296331927dba 411 SUPERFAMILY SSF141868 5 188 1.23E-22 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_16770 3e790c62490f9ced83d8296331927dba 411 Pfam PF08668 HDOD domain 196 317 1.6E-10 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMBLS11_16770 3e790c62490f9ced83d8296331927dba 411 SUPERFAMILY SSF109604 179 397 3.77E-39 T 14-10-2018 AMBLS11_16770 3e790c62490f9ced83d8296331927dba 411 Pfam PF00563 EAL domain 70 188 4.3E-10 T 14-10-2018 IPR001633 EAL domain AMBLS11_16770 3e790c62490f9ced83d8296331927dba 411 Gene3D G3DSA:1.10.3210.10 195 359 4.3E-20 T 14-10-2018 AMBLS11_16770 3e790c62490f9ced83d8296331927dba 411 PIRSF PIRSF003180 1 402 1.7E-116 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AMBLS11_16770 3e790c62490f9ced83d8296331927dba 411 Gene3D G3DSA:3.20.20.450 58 194 4.5E-14 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 Gene3D G3DSA:4.10.640.10 20 75 6.2E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 4.2E-37 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.1E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.1E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.1E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.1E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.505 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 Pfam PF01084 Ribosomal protein S18 19 68 1.0E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 72 1.0E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17430 f5e5489255dc0c3d92845d51db0f0d98 75 SUPERFAMILY SSF46911 3 74 5.23E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_11285 5d716180e1800279408ac5159e658494 94 SUPERFAMILY SSF53474 10 83 1.15E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_11285 5d716180e1800279408ac5159e658494 94 Gene3D G3DSA:3.40.50.1820 2 85 1.7E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 SUPERFAMILY SSF51445 53 433 8.0E-114 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 SUPERFAMILY SSF49785 703 838 5.95E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 Gene3D G3DSA:2.60.120.430 657 850 3.2E-21 T 14-10-2018 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 Gene3D G3DSA:3.20.20.300 55 416 2.3E-142 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 434 641 1.6E-37 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 SUPERFAMILY SSF52279 434 642 5.23E-49 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 206 222 7.1E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 160 179 7.1E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 316 334 7.1E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 136 152 7.1E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 246 262 7.1E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 70 393 1.2E-85 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMBLS11_17515 63d86e8cb2d4bfff1d77849fc71e8e6e 850 Gene3D G3DSA:3.40.50.1700 419 644 8.2E-72 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMBLS11_14680 0d66157ceb806427725377c83bd7ee74 175 SUPERFAMILY SSF88946 7 92 4.71E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_14680 0d66157ceb806427725377c83bd7ee74 175 Gene3D G3DSA:1.10.1740.10 3 113 6.9E-10 T 14-10-2018 AMBLS11_14680 0d66157ceb806427725377c83bd7ee74 175 Pfam PF04542 Sigma-70 region 2 10 85 9.0E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_14680 0d66157ceb806427725377c83bd7ee74 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 170 3.3E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_14680 0d66157ceb806427725377c83bd7ee74 175 SUPERFAMILY SSF88659 112 172 5.23E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_14680 0d66157ceb806427725377c83bd7ee74 175 Pfam PF08281 Sigma-70, region 4 118 167 1.7E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_14680 0d66157ceb806427725377c83bd7ee74 175 Gene3D G3DSA:1.10.10.10 114 174 1.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11765 b87678d8be0d2b67a829b2169650311f 306 SUPERFAMILY SSF161111 10 214 2.09E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMBLS11_11765 b87678d8be0d2b67a829b2169650311f 306 Gene3D G3DSA:1.20.1510.10 10 215 4.7E-24 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMBLS11_11765 b87678d8be0d2b67a829b2169650311f 306 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 274 4.3E-24 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMBLS11_11765 b87678d8be0d2b67a829b2169650311f 306 Pfam PF01545 Cation efflux family 14 213 9.0E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMBLS11_18225 8315e7b1ccae79e555bf710a478bf814 305 Gene3D G3DSA:2.30.42.10 200 301 1.1E-23 T 14-10-2018 AMBLS11_18225 8315e7b1ccae79e555bf710a478bf814 305 Pfam PF11356 Type II secretion system protein C 28 168 2.2E-42 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal AMBLS11_18225 8315e7b1ccae79e555bf710a478bf814 305 Gene3D G3DSA:2.30.30.830 102 169 3.8E-26 T 14-10-2018 AMBLS11_18225 8315e7b1ccae79e555bf710a478bf814 305 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 25 301 2.2E-56 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AMBLS11_18225 8315e7b1ccae79e555bf710a478bf814 305 Pfam PF13180 PDZ domain 247 300 4.8E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_18225 8315e7b1ccae79e555bf710a478bf814 305 SUPERFAMILY SSF50156 211 301 2.1E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMBLS11_07355 458c75657d16f26c48bbfe49418cdb12 243 SUPERFAMILY SSF89550 2 203 1.14E-11 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMBLS11_07355 458c75657d16f26c48bbfe49418cdb12 243 Gene3D G3DSA:3.20.20.140 1 241 9.4E-71 T 14-10-2018 AMBLS11_07355 458c75657d16f26c48bbfe49418cdb12 243 PIRSF PIRSF016557 1 236 6.5E-60 T 14-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 SUPERFAMILY SSF55120 66 239 1.05E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 SUPERFAMILY SSF55174 5 95 1.27E-13 T 14-10-2018 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 235 3.7E-55 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 Pfam PF00849 RNA pseudouridylate synthase 66 202 6.4E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 Gene3D G3DSA:3.10.290.10 1 58 2.7E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 SMART SM00363 3 60 1.5E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 Gene3D G3DSA:3.30.70.580 67 232 2.2E-54 T 14-10-2018 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 Pfam PF01479 S4 domain 4 47 6.8E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_06565 6f1b850da070b066f8406a7d7702003e 298 Gene3D G3DSA:3.30.70.1560 128 224 2.2E-54 T 14-10-2018 AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 111 3.5E-22 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 Gene3D G3DSA:3.40.140.10 1 151 8.4E-47 T 14-10-2018 AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 SUPERFAMILY SSF53597 155 369 2.94E-55 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 371 3.2E-57 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 SUPERFAMILY SSF53927 9 153 4.61E-46 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 13 368 8.1E-115 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 Gene3D G3DSA:3.40.430.10 152 377 2.4E-67 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 PIRSF PIRSF006769 4 373 1.4E-121 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMBLS11_12195 7e94b4852ffec109be114041f3ea426e 379 Pfam PF01872 RibD C-terminal domain 158 368 9.9E-50 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 Pfam PF03466 LysR substrate binding domain 93 289 3.2E-29 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 Gene3D G3DSA:3.40.190.10 164 264 5.4E-47 T 14-10-2018 AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 SUPERFAMILY SSF53850 93 293 3.52E-29 T 14-10-2018 AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 Gene3D G3DSA:3.40.190.10 94 292 5.4E-47 T 14-10-2018 AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 SUPERFAMILY SSF46785 5 89 1.09E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 9.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_03885 f7cd83a5e0b88d281b512f96ecb9bc72 302 Gene3D G3DSA:1.10.10.10 2 88 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_10720 435e48e3d5e6169d987de8ec84f50ab1 409 SUPERFAMILY SSF53383 3 407 6.59E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_10720 435e48e3d5e6169d987de8ec84f50ab1 409 Gene3D G3DSA:3.40.640.10 2 408 1.7E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_10720 435e48e3d5e6169d987de8ec84f50ab1 409 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 251 264 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AMBLS11_10720 435e48e3d5e6169d987de8ec84f50ab1 409 Pfam PF00155 Aminotransferase class I and II 30 401 4.1E-60 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_15020 f9fa7de6cc35f1546fc9f0ce491523ce 361 Pfam PF12221 Bacterial membrane protein N terminal 6 43 4.9E-5 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal AMBLS11_15020 f9fa7de6cc35f1546fc9f0ce491523ce 361 TIGRFAM TIGR01933 hflK: HflK protein 65 346 1.9E-76 T 14-10-2018 IPR010201 HflK GO:0016021 AMBLS11_15020 f9fa7de6cc35f1546fc9f0ce491523ce 361 Pfam PF01145 SPFH domain / Band 7 family 67 261 2.1E-26 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_15020 f9fa7de6cc35f1546fc9f0ce491523ce 361 SMART SM00244 63 245 9.7E-26 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_15020 f9fa7de6cc35f1546fc9f0ce491523ce 361 Gene3D G3DSA:3.30.479.30 131 235 3.0E-19 T 14-10-2018 AMBLS11_15020 f9fa7de6cc35f1546fc9f0ce491523ce 361 SUPERFAMILY SSF117892 137 252 2.35E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 SUPERFAMILY SSF51735 3 253 1.03E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 Gene3D G3DSA:3.40.50.720 1 257 9.6E-73 T 14-10-2018 AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 Pfam PF00106 short chain dehydrogenase 7 203 8.7E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08520 ce49b5b7b471efb0fc11de26d770e222 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_18590 1f13611ac0369871a69c8a125d1792a1 195 Gene3D G3DSA:3.40.630.30 4 191 2.7E-29 T 14-10-2018 AMBLS11_18590 1f13611ac0369871a69c8a125d1792a1 195 SUPERFAMILY SSF55729 1 185 1.77E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_18590 1f13611ac0369871a69c8a125d1792a1 195 Pfam PF00583 Acetyltransferase (GNAT) family 61 179 1.7E-11 T 14-10-2018 IPR000182 GNAT domain AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Gene3D G3DSA:2.40.50.100 4 80 3.0E-16 T 14-10-2018 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Gene3D G3DSA:3.30.559.10 424 671 7.0E-95 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 149 178 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Pfam PF02817 e3 binding domain 365 399 6.1E-16 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 SUPERFAMILY SSF51230 125 216 1.44E-21 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 SUPERFAMILY SSF51230 3 94 3.93E-19 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 SUPERFAMILY SSF47005 358 403 3.27E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 SUPERFAMILY SSF51230 241 333 1.26E-21 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Pfam PF00364 Biotin-requiring enzyme 243 314 1.7E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Pfam PF00364 Biotin-requiring enzyme 6 75 2.8E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Pfam PF00364 Biotin-requiring enzyme 127 198 7.2E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Gene3D G3DSA:4.10.320.10 364 408 1.8E-20 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 217 671 2.6E-183 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 440 670 3.4E-76 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Gene3D G3DSA:2.40.50.100 242 319 1.8E-19 T 14-10-2018 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 265 294 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 Gene3D G3DSA:2.40.50.100 124 203 1.1E-18 T 14-10-2018 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 SUPERFAMILY SSF52777 430 670 9.34E-80 T 14-10-2018 AMBLS11_13925 b045115072e66f00a21fc311a9fc1f3f 671 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMBLS11_14870 096fc65b72ae5fe4ed1b67f3b8d5efeb 132 Pfam PF06877 Regulator of ribonuclease activity B 12 113 2.3E-29 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain AMBLS11_14870 096fc65b72ae5fe4ed1b67f3b8d5efeb 132 Gene3D G3DSA:3.30.70.970 1 126 7.1E-46 T 14-10-2018 IPR036701 RraB-like superfamily AMBLS11_14870 096fc65b72ae5fe4ed1b67f3b8d5efeb 132 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 5 117 29.845 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B AMBLS11_14870 096fc65b72ae5fe4ed1b67f3b8d5efeb 132 PIRSF PIRSF018193 1 132 1.8E-45 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B AMBLS11_14870 096fc65b72ae5fe4ed1b67f3b8d5efeb 132 SUPERFAMILY SSF89946 5 123 2.75E-36 T 14-10-2018 IPR036701 RraB-like superfamily AMBLS11_03480 310b85f32dfeb41e0788d4d7f03258a8 245 SUPERFAMILY SSF53448 4 233 2.14E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_03480 310b85f32dfeb41e0788d4d7f03258a8 245 Pfam PF00535 Glycosyl transferase family 2 7 163 9.6E-25 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_03480 310b85f32dfeb41e0788d4d7f03258a8 245 Gene3D G3DSA:3.90.550.10 2 234 5.0E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_08190 c868a9c2d5f0964e676d275f66149e12 191 Pfam PF06055 Exopolysaccharide synthesis, ExoD 6 185 1.9E-52 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AMBLS11_08190 c868a9c2d5f0964e676d275f66149e12 191 PIRSF PIRSF033239 1 191 5.3E-53 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 Gene3D G3DSA:1.10.10.160 78 187 1.1E-84 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1061 1.2E-223 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 SUPERFAMILY SSF52540 359 794 2.52E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1100 17.212 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 SUPERFAMILY SSF52980 836 1079 2.79E-14 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 PIRSF PIRSF000980 1 1151 3.1E-237 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 Gene3D G3DSA:3.40.50.10930 4 298 1.1E-84 T 14-10-2018 AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 SUPERFAMILY SSF52540 2 338 1.95E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 793 4.4E-236 T 14-10-2018 AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 Gene3D G3DSA:3.40.50.300 328 794 6.9E-143 T 14-10-2018 AMBLS11_10805 4061469ef32029fcf4fc4e87befca4cd 1218 Gene3D G3DSA:1.10.486.10 455 665 6.9E-143 T 14-10-2018 AMBLS11_02495 fdd12383eba71f4031eb38a88893a2f1 418 Pfam PF00464 Serine hydroxymethyltransferase 8 386 9.7E-185 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMBLS11_02495 fdd12383eba71f4031eb38a88893a2f1 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.002 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMBLS11_02495 fdd12383eba71f4031eb38a88893a2f1 418 Gene3D G3DSA:3.90.1150.10 10 394 1.4E-189 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_02495 fdd12383eba71f4031eb38a88893a2f1 418 PIRSF PIRSF000412 2 415 2.2E-171 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMBLS11_02495 fdd12383eba71f4031eb38a88893a2f1 418 SUPERFAMILY SSF53383 4 416 5.03E-182 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_02495 fdd12383eba71f4031eb38a88893a2f1 418 Gene3D G3DSA:3.40.640.10 37 289 1.4E-189 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_02495 fdd12383eba71f4031eb38a88893a2f1 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMBLS11_12185 70d1b1fef07469e1b60d212b77876969 366 SUPERFAMILY SSF142695 205 365 1.57E-44 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMBLS11_12185 70d1b1fef07469e1b60d212b77876969 366 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 4.7E-87 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_12185 70d1b1fef07469e1b60d212b77876969 366 SUPERFAMILY SSF55821 2 201 7.1E-89 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMBLS11_12185 70d1b1fef07469e1b60d212b77876969 366 Gene3D G3DSA:3.90.870.10 1 206 8.1E-91 T 14-10-2018 AMBLS11_12185 70d1b1fef07469e1b60d212b77876969 366 Pfam PF00925 GTP cyclohydrolase II 208 364 1.1E-34 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMBLS11_12185 70d1b1fef07469e1b60d212b77876969 366 PIRSF PIRSF001259 1 365 3.7E-128 T 14-10-2018 AMBLS11_12185 70d1b1fef07469e1b60d212b77876969 366 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 6.4E-79 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_12185 70d1b1fef07469e1b60d212b77876969 366 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 39.522 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMBLS11_17900 9b01ae30e41d9522baaf62730c832ebf 368 Gene3D G3DSA:2.60.120.1440 124 278 1.9E-22 T 14-10-2018 AMBLS11_17900 9b01ae30e41d9522baaf62730c832ebf 368 Gene3D G3DSA:3.55.50.30 293 367 8.7E-7 T 14-10-2018 AMBLS11_17900 9b01ae30e41d9522baaf62730c832ebf 368 Pfam PF16344 Domain of unknown function (DUF4974) 277 363 1.5E-7 T 14-10-2018 IPR032508 Protein FecR, C-terminal AMBLS11_17900 9b01ae30e41d9522baaf62730c832ebf 368 PIRSF PIRSF018266 21 368 7.4E-63 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AMBLS11_17900 9b01ae30e41d9522baaf62730c832ebf 368 Pfam PF04773 FecR protein 146 236 4.7E-20 T 14-10-2018 IPR006860 FecR protein AMBLS11_17900 9b01ae30e41d9522baaf62730c832ebf 368 Pfam PF16220 Domain of unknown function (DUF4880) 32 69 1.1E-5 T 14-10-2018 IPR032623 FecR, N-terminal AMBLS11_16560 a48581cad7cf70ce4c7ca75e1e6e7deb 69 PIRSF PIRSF002599 1 69 4.3E-25 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMBLS11_16560 a48581cad7cf70ce4c7ca75e1e6e7deb 69 Pfam PF00313 'Cold-shock' DNA-binding domain 4 68 2.0E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_16560 a48581cad7cf70ce4c7ca75e1e6e7deb 69 PRINTS PR00050 Cold shock protein signature 42 60 6.3E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_16560 a48581cad7cf70ce4c7ca75e1e6e7deb 69 PRINTS PR00050 Cold shock protein signature 27 36 6.3E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_16560 a48581cad7cf70ce4c7ca75e1e6e7deb 69 PRINTS PR00050 Cold shock protein signature 6 21 6.3E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_16560 a48581cad7cf70ce4c7ca75e1e6e7deb 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 14-10-2018 IPR019844 Cold-shock conserved site AMBLS11_16560 a48581cad7cf70ce4c7ca75e1e6e7deb 69 SMART SM00357 5 69 1.4E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMBLS11_16560 a48581cad7cf70ce4c7ca75e1e6e7deb 69 SUPERFAMILY SSF50249 3 68 2.03E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_16560 a48581cad7cf70ce4c7ca75e1e6e7deb 69 Gene3D G3DSA:2.40.50.140 1 69 3.1E-31 T 14-10-2018 AMBLS11_06935 251978c6ef197cd76ab3cf3bed0df8c5 230 Gene3D G3DSA:3.40.50.1820 25 214 2.4E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_06935 251978c6ef197cd76ab3cf3bed0df8c5 230 Pfam PF01738 Dienelactone hydrolase family 65 220 2.6E-8 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AMBLS11_06935 251978c6ef197cd76ab3cf3bed0df8c5 230 SUPERFAMILY SSF53474 19 202 2.1E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_06755 7b588cd7ea429410a12cd3504209d644 503 SUPERFAMILY SSF56317 206 466 2.22E-34 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMBLS11_06755 7b588cd7ea429410a12cd3504209d644 503 Pfam PF00795 Carbon-nitrogen hydrolase 248 464 3.5E-26 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMBLS11_06755 7b588cd7ea429410a12cd3504209d644 503 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 4 489 21.782 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AMBLS11_06755 7b588cd7ea429410a12cd3504209d644 503 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 56 448 9.7E-86 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AMBLS11_06755 7b588cd7ea429410a12cd3504209d644 503 Gene3D G3DSA:3.60.110.10 244 467 4.3E-8 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMBLS11_00520 f2ad0d7576dbd82b607e839fb6ba9c00 353 SUPERFAMILY SSF55073 199 352 2.17E-45 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_00520 f2ad0d7576dbd82b607e839fb6ba9c00 353 SMART SM00267 181 352 5.9E-56 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00520 f2ad0d7576dbd82b607e839fb6ba9c00 353 Gene3D G3DSA:3.30.70.270 180 353 3.2E-52 T 14-10-2018 AMBLS11_00520 f2ad0d7576dbd82b607e839fb6ba9c00 353 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 350 4.1E-44 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00520 f2ad0d7576dbd82b607e839fb6ba9c00 353 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 352 1.6E-48 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_04655 f29801e8bfd94a3999d7d1c947877a49 207 Pfam PF14437 MafB19-like deaminase 44 188 2.6E-33 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AMBLS11_04655 f29801e8bfd94a3999d7d1c947877a49 207 Gene3D G3DSA:3.40.140.10 36 202 2.4E-61 T 14-10-2018 AMBLS11_04655 f29801e8bfd94a3999d7d1c947877a49 207 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 92 129 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMBLS11_04655 f29801e8bfd94a3999d7d1c947877a49 207 SUPERFAMILY SSF53927 31 192 1.51E-54 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMBLS11_04655 f29801e8bfd94a3999d7d1c947877a49 207 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 47 188 44.545 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AMBLS11_17665 502fdda8aac91540ce7594d7b9824eb9 471 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 420 430 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMBLS11_17665 502fdda8aac91540ce7594d7b9824eb9 471 Gene3D G3DSA:3.40.50.200 182 471 1.6E-43 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_17665 502fdda8aac91540ce7594d7b9824eb9 471 SUPERFAMILY SSF52743 210 470 6.94E-44 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_17665 502fdda8aac91540ce7594d7b9824eb9 471 Pfam PF00082 Subtilase family 212 441 4.3E-24 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMBLS11_17665 502fdda8aac91540ce7594d7b9824eb9 471 PRINTS PR00723 Subtilisin serine protease family (S8) signature 419 435 1.7E-5 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_17665 502fdda8aac91540ce7594d7b9824eb9 471 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 226 1.7E-5 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_17665 502fdda8aac91540ce7594d7b9824eb9 471 PRINTS PR00723 Subtilisin serine protease family (S8) signature 269 282 1.7E-5 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 SMART SM00382 141 284 5.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 Gene3D G3DSA:1.10.10.60 380 423 1.5E-8 T 14-10-2018 AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 Pfam PF02954 Bacterial regulatory protein, Fis family 380 420 9.9E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 329 338 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 SUPERFAMILY SSF46689 330 423 2.54E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 207 222 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 Gene3D G3DSA:1.10.8.60 292 365 1.5E-19 T 14-10-2018 AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 SUPERFAMILY SSF52540 121 359 2.53E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 Pfam PF00158 Sigma-54 interaction domain 121 287 6.0E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 Gene3D G3DSA:3.40.50.300 109 291 1.8E-61 T 14-10-2018 AMBLS11_17570 298348726d2698cee737e0387a5c2465 426 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 145 158 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMBLS11_02845 eab61baf5de0c2b9c73abbdcf900fab8 193 SUPERFAMILY SSF53474 4 192 1.61E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_02845 eab61baf5de0c2b9c73abbdcf900fab8 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 191 7.7E-51 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AMBLS11_02845 eab61baf5de0c2b9c73abbdcf900fab8 193 Gene3D G3DSA:3.40.50.1820 1 193 2.2E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 Gene3D G3DSA:3.40.50.261 124 288 3.6E-77 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 SUPERFAMILY SSF51735 1 122 1.65E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 Gene3D G3DSA:3.40.50.720 1 123 4.4E-52 T 14-10-2018 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 SMART SM00881 4 100 3.5E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 8.4E-41 T 14-10-2018 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 8.4E-41 T 14-10-2018 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 8.4E-41 T 14-10-2018 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 8.4E-41 T 14-10-2018 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 Pfam PF02629 CoA binding domain 6 99 5.9E-32 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 PIRSF PIRSF001553 1 289 1.1E-135 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.582 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 SUPERFAMILY SSF52210 123 285 1.96E-57 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 286 3.3E-147 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMBLS11_08925 daa2c9e493aaf7a146ed6db3147d6a69 290 Pfam PF00549 CoA-ligase 151 270 6.9E-21 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMBLS11_16980 dda067a2b7a7ed28b62fd1668e74a382 226 Gene3D G3DSA:2.60.120.620 1 178 6.2E-44 T 14-10-2018 AMBLS11_16980 dda067a2b7a7ed28b62fd1668e74a382 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 83 176 3.6E-15 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMBLS11_16980 dda067a2b7a7ed28b62fd1668e74a382 226 SMART SM00702 1 177 7.8E-19 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMBLS11_16980 dda067a2b7a7ed28b62fd1668e74a382 226 Gene3D G3DSA:4.10.860.20 180 226 5.2E-21 T 14-10-2018 AMBLS11_16980 dda067a2b7a7ed28b62fd1668e74a382 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 43.457 T 14-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 AMBLS11_18180 adb816f13e6d2874545558165bbe0826 301 SUPERFAMILY SSF52540 4 286 1.65E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_18180 adb816f13e6d2874545558165bbe0826 301 PRINTS PR00478 Phosphoribulokinase family signature 126 144 4.9E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMBLS11_18180 adb816f13e6d2874545558165bbe0826 301 PRINTS PR00478 Phosphoribulokinase family signature 12 29 4.9E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMBLS11_18180 adb816f13e6d2874545558165bbe0826 301 PRINTS PR00478 Phosphoribulokinase family signature 182 205 4.9E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMBLS11_18180 adb816f13e6d2874545558165bbe0826 301 PRINTS PR00478 Phosphoribulokinase family signature 164 181 4.9E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMBLS11_18180 adb816f13e6d2874545558165bbe0826 301 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AMBLS11_18180 adb816f13e6d2874545558165bbe0826 301 Gene3D G3DSA:3.40.50.300 1 290 1.6E-112 T 14-10-2018 AMBLS11_18180 adb816f13e6d2874545558165bbe0826 301 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.1E-69 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AMBLS11_17450 788d5820bd8550294ec04b828291a825 267 Gene3D G3DSA:3.40.50.300 29 264 6.4E-59 T 14-10-2018 AMBLS11_17450 788d5820bd8550294ec04b828291a825 267 Pfam PF00005 ABC transporter 54 201 1.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_17450 788d5820bd8550294ec04b828291a825 267 SUPERFAMILY SSF52540 27 243 3.73E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17450 788d5820bd8550294ec04b828291a825 267 SMART SM00382 58 248 1.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 Pfam PF00206 Lyase 14 312 1.6E-70 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 Gene3D G3DSA:1.10.40.30 382 445 6.2E-157 T 14-10-2018 AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 7.4E-18 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 7.4E-18 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 7.4E-18 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 7.4E-18 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 SUPERFAMILY SSF48557 4 446 5.03E-107 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 Gene3D G3DSA:1.10.275.10 1 117 4.0E-49 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 7.3E-52 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 2.5E-141 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_08340 0072aea60b1649ab92f8777b3b3690e9 455 Gene3D G3DSA:1.20.200.10 118 446 6.2E-157 T 14-10-2018 AMBLS11_14095 0e2c3b4d1036ed5622911f2ec8ee2da2 253 Pfam PF07277 SapC 8 224 4.6E-66 T 14-10-2018 IPR010836 SapC AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 Pfam PF00245 Alkaline phosphatase 44 447 9.5E-91 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 Gene3D G3DSA:1.10.60.40 326 410 4.4E-128 T 14-10-2018 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 Gene3D G3DSA:3.40.720.10 47 441 4.4E-128 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 SUPERFAMILY SSF53649 36 449 2.97E-101 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 PRINTS PR00113 Alkaline phosphatase signature 98 113 2.4E-29 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 PRINTS PR00113 Alkaline phosphatase signature 43 63 2.4E-29 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 PRINTS PR00113 Alkaline phosphatase signature 135 155 2.4E-29 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 PRINTS PR00113 Alkaline phosphatase signature 185 195 2.4E-29 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 PRINTS PR00113 Alkaline phosphatase signature 250 279 2.4E-29 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 SMART SM00098 44 451 2.9E-89 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMBLS11_13045 0fc48d08ef70903ae6320b8b005ddcd8 492 ProSitePatterns PS00123 Alkaline phosphatase active site. 98 106 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMBLS11_10455 db3cf925292e7ac617ab6e118dfe401d 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AMBLS11_10455 db3cf925292e7ac617ab6e118dfe401d 250 Gene3D G3DSA:3.40.50.620 1 248 2.1E-87 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_10455 db3cf925292e7ac617ab6e118dfe401d 250 SUPERFAMILY SSF52402 1 242 1.81E-84 T 14-10-2018 AMBLS11_10455 db3cf925292e7ac617ab6e118dfe401d 250 PIRSF PIRSF000090 1 249 4.3E-83 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AMBLS11_10455 db3cf925292e7ac617ab6e118dfe401d 250 Pfam PF01012 Electron transfer flavoprotein domain 31 206 6.9E-46 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMBLS11_10455 db3cf925292e7ac617ab6e118dfe401d 250 SMART SM00893 23 211 3.6E-66 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 Gene3D G3DSA:3.30.830.10 468 847 1.8E-91 T 14-10-2018 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 SUPERFAMILY SSF63411 468 690 2.75E-42 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 SUPERFAMILY SSF63411 10 226 4.19E-46 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 41 64 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 Gene3D G3DSA:3.30.830.10 616 874 1.8E-91 T 14-10-2018 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 Gene3D G3DSA:3.30.830.10 237 466 4.5E-60 T 14-10-2018 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 Pfam PF00675 Insulinase (Peptidase family M16) 22 154 6.2E-29 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 Gene3D G3DSA:3.30.830.10 5 231 8.4E-70 T 14-10-2018 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 SUPERFAMILY SSF63411 701 915 2.97E-40 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 3.3E-53 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 SUPERFAMILY SSF63411 234 467 1.56E-62 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 Pfam PF05193 Peptidase M16 inactive domain 183 350 1.1E-14 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMBLS11_05880 fbbe860065302ecc620b34589d112edd 915 Pfam PF05193 Peptidase M16 inactive domain 645 805 1.4E-6 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMBLS11_14490 24a22969f3c32281547b47171f6d5fe7 666 Pfam PF04348 LppC putative lipoprotein 377 650 1.4E-43 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA AMBLS11_14490 24a22969f3c32281547b47171f6d5fe7 666 Pfam PF04348 LppC putative lipoprotein 66 360 2.1E-30 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA AMBLS11_14490 24a22969f3c32281547b47171f6d5fe7 666 Gene3D G3DSA:3.40.50.2300 473 662 2.4E-24 T 14-10-2018 AMBLS11_14490 24a22969f3c32281547b47171f6d5fe7 666 Gene3D G3DSA:1.25.40.650 164 262 1.5E-5 T 14-10-2018 AMBLS11_14490 24a22969f3c32281547b47171f6d5fe7 666 SUPERFAMILY SSF53822 265 663 1.84E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_06550 e0612d8c7ff7eafc0a53dd758bbc0156 206 Gene3D G3DSA:3.90.870.10 1 205 4.0E-66 T 14-10-2018 AMBLS11_06550 e0612d8c7ff7eafc0a53dd758bbc0156 206 SUPERFAMILY SSF55821 1 204 6.41E-62 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMBLS11_06550 e0612d8c7ff7eafc0a53dd758bbc0156 206 Pfam PF01300 Telomere recombination 22 198 1.7E-46 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMBLS11_06550 e0612d8c7ff7eafc0a53dd758bbc0156 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.6E-69 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 SUPERFAMILY SSF46689 342 435 3.76E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 Gene3D G3DSA:1.10.10.60 377 441 9.0E-10 T 14-10-2018 AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 Pfam PF00158 Sigma-54 interaction domain 133 296 1.1E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 Pfam PF02954 Bacterial regulatory protein, Fis family 399 435 3.1E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 Gene3D G3DSA:1.10.8.60 301 376 4.1E-25 T 14-10-2018 AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 SUPERFAMILY SSF52172 1 173 1.1E-41 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 SMART SM00382 149 293 3.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 Gene3D G3DSA:3.40.50.2300 1 120 2.8E-33 T 14-10-2018 AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 SUPERFAMILY SSF52540 137 370 8.85E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 Gene3D G3DSA:3.40.50.300 121 300 1.7E-63 T 14-10-2018 AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 Pfam PF00072 Response regulator receiver domain 6 114 9.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_04945 7ecc5fce6922b54d93b0fe303c54c929 445 SMART SM00448 4 115 3.4E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 Gene3D G3DSA:2.130.10.10 3 139 1.1E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 SUPERFAMILY SSF50998 10 301 2.04E-51 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 Pfam PF00400 WD domain, G-beta repeat 141 173 5.6E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 Pfam PF00400 WD domain, G-beta repeat 220 258 0.053 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 Gene3D G3DSA:2.130.10.10 140 309 7.6E-33 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 SMART SM00320 134 173 1.3E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 SMART SM00320 49 90 120.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 SMART SM00320 217 258 2.8E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 SMART SM00320 269 307 71.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 SMART SM00320 93 132 43.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 SMART SM00320 176 214 0.4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_18380 ac21e6869a2f7eed64d7df795a991e7f 310 SMART SM00320 7 46 3.9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_11505 213bdd199b052193483e94d6f5454e0d 251 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 19 198 3.9E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMBLS11_11505 213bdd199b052193483e94d6f5454e0d 251 Gene3D G3DSA:3.40.225.10 3 251 6.8E-73 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMBLS11_11505 213bdd199b052193483e94d6f5454e0d 251 SUPERFAMILY SSF53639 12 216 7.46E-60 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMBLS11_11505 213bdd199b052193483e94d6f5454e0d 251 SMART SM01007 18 198 9.8E-62 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMBLS11_08390 5b647f4e0a9e86f2403a7e247b9e8c67 248 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 210 3.8E-70 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AMBLS11_08390 5b647f4e0a9e86f2403a7e247b9e8c67 248 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 222 1.5E-62 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AMBLS11_08390 5b647f4e0a9e86f2403a7e247b9e8c67 248 Gene3D G3DSA:3.40.630.70 62 241 8.1E-62 T 14-10-2018 AMBLS11_08390 5b647f4e0a9e86f2403a7e247b9e8c67 248 SUPERFAMILY SSF55729 3 224 1.06E-84 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_08390 5b647f4e0a9e86f2403a7e247b9e8c67 248 Gene3D G3DSA:2.30.210.20 4 61 3.7E-25 T 14-10-2018 AMBLS11_08390 5b647f4e0a9e86f2403a7e247b9e8c67 248 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 248 86.374 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AMBLS11_13980 45e3494318297bf1c815078e34e30f43 250 Gene3D G3DSA:1.10.3900.10 12 178 6.6E-82 T 14-10-2018 AMBLS11_13980 45e3494318297bf1c815078e34e30f43 250 Pfam PF07072 Cell division protein 18 225 1.3E-72 T 14-10-2018 IPR009777 Cell division protein ZapD AMBLS11_13980 45e3494318297bf1c815078e34e30f43 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 250 31.041 T 14-10-2018 IPR009777 Cell division protein ZapD AMBLS11_13980 45e3494318297bf1c815078e34e30f43 250 Gene3D G3DSA:2.60.440.10 5 250 6.6E-82 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal AMBLS11_13980 45e3494318297bf1c815078e34e30f43 250 SUPERFAMILY SSF160950 2 250 1.31E-81 T 14-10-2018 IPR036268 ZapD domain superfamily AMBLS11_00525 592e687c7e63f7ac4eff1a5d0abb1757 223 SUPERFAMILY SSF53474 11 222 3.07E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_00525 592e687c7e63f7ac4eff1a5d0abb1757 223 Gene3D G3DSA:3.40.50.1820 2 223 1.7E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_00525 592e687c7e63f7ac4eff1a5d0abb1757 223 Pfam PF02230 Phospholipase/Carboxylesterase 12 221 2.6E-55 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AMBLS11_14635 03e3c1f3857eba25dbe7d9f29f29294a 233 Gene3D G3DSA:3.40.50.1580 1 233 6.8E-68 T 14-10-2018 AMBLS11_14635 03e3c1f3857eba25dbe7d9f29f29294a 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 230 1.8E-80 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMBLS11_14635 03e3c1f3857eba25dbe7d9f29f29294a 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 3 231 42.717 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMBLS11_14635 03e3c1f3857eba25dbe7d9f29f29294a 233 SUPERFAMILY SSF53167 3 231 2.49E-69 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMBLS11_14635 03e3c1f3857eba25dbe7d9f29f29294a 233 Pfam PF01048 Phosphorylase superfamily 3 228 9.8E-49 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMBLS11_16730 69e40ab7189ee1473c0eeab4791b88f5 294 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 17 294 23.986 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AMBLS11_16730 69e40ab7189ee1473c0eeab4791b88f5 294 PIRSF PIRSF035875 5 294 2.9E-61 T 14-10-2018 IPR017039 Virulence factor BrkB AMBLS11_16730 69e40ab7189ee1473c0eeab4791b88f5 294 Pfam PF03631 Virulence factor BrkB 30 276 5.2E-56 T 14-10-2018 IPR017039 Virulence factor BrkB AMBLS11_16730 69e40ab7189ee1473c0eeab4791b88f5 294 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 277 3.1E-86 T 14-10-2018 IPR017039 Virulence factor BrkB AMBLS11_12565 b7d81904526a9d489cf0cd5e145de8f9 83 SUPERFAMILY SSF109910 2 79 5.49E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AMBLS11_12565 b7d81904526a9d489cf0cd5e145de8f9 83 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 6.4E-26 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase AMBLS11_12565 b7d81904526a9d489cf0cd5e145de8f9 83 Gene3D G3DSA:1.10.150.250 1 83 5.9E-33 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AMBLS11_10325 b88330044f8c0b398a6684798b59d059 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 262 2.3E-34 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMBLS11_10325 b88330044f8c0b398a6684798b59d059 263 Gene3D G3DSA:3.10.310.10 7 255 4.4E-82 T 14-10-2018 AMBLS11_10325 b88330044f8c0b398a6684798b59d059 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 5.8E-54 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMBLS11_10325 b88330044f8c0b398a6684798b59d059 263 SUPERFAMILY SSF54506 1 263 1.15E-73 T 14-10-2018 AMBLS11_10325 b88330044f8c0b398a6684798b59d059 263 Gene3D G3DSA:3.10.310.10 119 251 4.4E-82 T 14-10-2018 AMBLS11_10325 b88330044f8c0b398a6684798b59d059 263 PIRSF PIRSF016184 1 263 1.1E-49 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 7.6E-49 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 PIRSF PIRSF000183 1 375 1.4E-153 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 SUPERFAMILY SSF52283 1 360 1.62E-67 T 14-10-2018 AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 SUPERFAMILY SSF51735 137 303 5.05E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 SMART SM01002 149 297 1.3E-90 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 374 9.7E-155 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 SMART SM01003 4 137 1.6E-80 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 1.1E-6 T 14-10-2018 AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 1.1E-6 T 14-10-2018 AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 2.0E-83 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 Gene3D G3DSA:3.40.50.720 130 305 5.5E-138 T 14-10-2018 AMBLS11_09845 802cfacc8996a716999b77a6674295b9 377 Gene3D G3DSA:3.40.50.720 3 353 5.5E-138 T 14-10-2018 AMBLS11_08250 00d7360d0ec3b7e21287538589552562 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 9.0E-54 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMBLS11_08250 00d7360d0ec3b7e21287538589552562 159 Pfam PF01668 SmpB protein 14 157 1.9E-58 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMBLS11_08250 00d7360d0ec3b7e21287538589552562 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 70.543 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMBLS11_08250 00d7360d0ec3b7e21287538589552562 159 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site AMBLS11_08250 00d7360d0ec3b7e21287538589552562 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-50 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMBLS11_08250 00d7360d0ec3b7e21287538589552562 159 SUPERFAMILY SSF74982 8 138 1.57E-48 T 14-10-2018 IPR023620 Small protein B AMBLS11_08250 00d7360d0ec3b7e21287538589552562 159 Gene3D G3DSA:2.40.280.10 6 134 9.2E-46 T 14-10-2018 IPR023620 Small protein B AMBLS11_18890 0e78744c9d527475d2c7c688ecf40c3f 213 SUPERFAMILY SSF103088 92 207 2.09E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_18890 0e78744c9d527475d2c7c688ecf40c3f 213 Pfam PF13488 Glycine zipper 29 74 6.6E-14 T 14-10-2018 IPR039567 Glycine zipper domain AMBLS11_18890 0e78744c9d527475d2c7c688ecf40c3f 213 ProSitePatterns PS01068 OmpA-like domain. 137 181 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMBLS11_18890 0e78744c9d527475d2c7c688ecf40c3f 213 PRINTS PR01021 OMPA domain signature 105 127 1.7E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_18890 0e78744c9d527475d2c7c688ecf40c3f 213 PRINTS PR01021 OMPA domain signature 150 166 1.7E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_18890 0e78744c9d527475d2c7c688ecf40c3f 213 PRINTS PR01021 OMPA domain signature 135 150 1.7E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_18890 0e78744c9d527475d2c7c688ecf40c3f 213 Gene3D G3DSA:3.30.1330.60 68 213 9.1E-47 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_18890 0e78744c9d527475d2c7c688ecf40c3f 213 Pfam PF00691 OmpA family 104 199 8.7E-23 T 14-10-2018 IPR006665 OmpA-like domain AMBLS11_07835 2c02f86fd19df8c86b91a29245781bf9 774 Pfam PF00384 Molybdopterin oxidoreductase 110 495 5.1E-27 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_07835 2c02f86fd19df8c86b91a29245781bf9 774 Gene3D G3DSA:3.40.50.740 121 516 3.4E-69 T 14-10-2018 AMBLS11_07835 2c02f86fd19df8c86b91a29245781bf9 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 736 9.7E-10 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMBLS11_07835 2c02f86fd19df8c86b91a29245781bf9 774 SUPERFAMILY SSF53706 48 631 2.62E-148 T 14-10-2018 AMBLS11_07835 2c02f86fd19df8c86b91a29245781bf9 774 SUPERFAMILY SSF50692 645 764 5.88E-17 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMBLS11_07835 2c02f86fd19df8c86b91a29245781bf9 774 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 5.9E-292 T 14-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AMBLS11_07835 2c02f86fd19df8c86b91a29245781bf9 774 Gene3D G3DSA:3.40.228.10 186 413 3.4E-69 T 14-10-2018 AMBLS11_07835 2c02f86fd19df8c86b91a29245781bf9 774 PIRSF PIRSF000144 1 767 0.0 T 14-10-2018 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 Gene3D G3DSA:3.30.230.10 7 173 4.5E-85 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 PIRSF PIRSF000676 1 314 1.3E-75 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 Hamap MF_00384 Homoserine kinase [thrB]. 6 314 27.453 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 Pfam PF00288 GHMP kinases N terminal domain 90 156 7.7E-14 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 TIGRFAM TIGR00191 thrB: homoserine kinase 6 313 3.2E-87 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 Pfam PF08544 GHMP kinases C terminal 223 294 7.4E-12 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 SUPERFAMILY SSF54211 4 169 1.44E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 Gene3D G3DSA:3.30.70.890 174 283 4.5E-85 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 PRINTS PR00958 Homoserine kinase signature 143 156 2.4E-27 T 14-10-2018 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 PRINTS PR00958 Homoserine kinase signature 260 275 2.4E-27 T 14-10-2018 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 PRINTS PR00958 Homoserine kinase signature 11 26 2.4E-27 T 14-10-2018 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 PRINTS PR00958 Homoserine kinase signature 103 118 2.4E-27 T 14-10-2018 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 PRINTS PR00958 Homoserine kinase signature 181 198 2.4E-27 T 14-10-2018 AMBLS11_14330 343de4cb544eabd65a3c61e68326027a 314 SUPERFAMILY SSF55060 178 293 1.58E-27 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMBLS11_16945 01f7c796c7bdea4cd7343d31b724efd6 206 SUPERFAMILY SSF74653 123 203 2.75E-6 T 14-10-2018 AMBLS11_16945 01f7c796c7bdea4cd7343d31b724efd6 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 199 3.2E-5 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMBLS11_16945 01f7c796c7bdea4cd7343d31b724efd6 206 Gene3D G3DSA:3.30.1150.10 110 203 1.5E-9 T 14-10-2018 AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 PRINTS PR00340 P-II protein signature 2 17 4.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 PRINTS PR00340 P-II protein signature 52 75 4.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 PRINTS PR00340 P-II protein signature 23 41 4.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 PRINTS PR00340 P-II protein signature 83 103 4.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 PIRSF PIRSF039144 1 112 4.8E-57 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 SMART SM00938 4 105 3.2E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 Gene3D G3DSA:3.30.70.120 1 112 5.2E-49 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 SUPERFAMILY SSF54913 1 112 6.12E-46 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMBLS11_12580 56c9902fc7003efa2d29fac10f5249df 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMBLS11_00450 b37efad84e9b164769baa9f721f6b37d 284 SUPERFAMILY SSF56281 39 255 1.01E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_00450 b37efad84e9b164769baa9f721f6b37d 284 Pfam PF00753 Metallo-beta-lactamase superfamily 42 240 2.5E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_00450 b37efad84e9b164769baa9f721f6b37d 284 Gene3D G3DSA:3.60.15.10 29 282 7.1E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_00450 b37efad84e9b164769baa9f721f6b37d 284 SMART SM00849 41 240 3.0E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_07005 912ad5b6d24ccad203922dca9f1ac0e5 434 SUPERFAMILY SSF55073 9 157 1.1E-24 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07005 912ad5b6d24ccad203922dca9f1ac0e5 434 Pfam PF00563 EAL domain 176 408 1.5E-62 T 14-10-2018 IPR001633 EAL domain AMBLS11_07005 912ad5b6d24ccad203922dca9f1ac0e5 434 SMART SM00052 169 414 1.9E-85 T 14-10-2018 IPR001633 EAL domain AMBLS11_07005 912ad5b6d24ccad203922dca9f1ac0e5 434 Gene3D G3DSA:3.30.70.270 1 170 3.1E-26 T 14-10-2018 AMBLS11_07005 912ad5b6d24ccad203922dca9f1ac0e5 434 Pfam PF00990 Diguanylate cyclase, GGDEF domain 6 152 9.4E-24 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07005 912ad5b6d24ccad203922dca9f1ac0e5 434 SMART SM00267 1 158 1.2E-13 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07005 912ad5b6d24ccad203922dca9f1ac0e5 434 SUPERFAMILY SSF141868 176 421 8.63E-78 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07005 912ad5b6d24ccad203922dca9f1ac0e5 434 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 157 3.5E-14 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07005 912ad5b6d24ccad203922dca9f1ac0e5 434 Gene3D G3DSA:3.20.20.450 171 428 2.7E-82 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_17940 e06a3f4455736670f2cd82b0ea68cb0e 313 Pfam PF06481 COX Aromatic Rich Motif 235 280 1.5E-21 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AMBLS11_17940 e06a3f4455736670f2cd82b0ea68cb0e 313 SUPERFAMILY SSF81464 15 113 1.23E-22 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17940 e06a3f4455736670f2cd82b0ea68cb0e 313 SUPERFAMILY SSF49503 117 277 1.62E-50 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_17940 e06a3f4455736670f2cd82b0ea68cb0e 313 Gene3D G3DSA:1.10.287.90 24 108 1.0E-31 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17940 e06a3f4455736670f2cd82b0ea68cb0e 313 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 144 214 8.1E-6 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_17940 e06a3f4455736670f2cd82b0ea68cb0e 313 PIRSF PIRSF000292 2 309 2.0E-129 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AMBLS11_17940 e06a3f4455736670f2cd82b0ea68cb0e 313 Gene3D G3DSA:2.60.40.420 109 277 2.4E-59 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_17940 e06a3f4455736670f2cd82b0ea68cb0e 313 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 14 235 1.4E-107 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AMBLS11_14650 94dbb113e65779aeb9696a806a64b04a 134 SUPERFAMILY SSF52821 33 131 4.45E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_14650 94dbb113e65779aeb9696a806a64b04a 134 Gene3D G3DSA:3.40.250.10 35 133 3.4E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_14650 94dbb113e65779aeb9696a806a64b04a 134 Pfam PF00581 Rhodanese-like domain 40 126 3.7E-19 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_14650 94dbb113e65779aeb9696a806a64b04a 134 SMART SM00450 33 130 1.1E-22 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09510 99c0bed8f03b9c5360ce262a28988337 477 Gene3D G3DSA:1.20.210.10 4 474 2.0E-205 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_09510 99c0bed8f03b9c5360ce262a28988337 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 14 444 6.7E-115 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_09510 99c0bed8f03b9c5360ce262a28988337 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_09510 99c0bed8f03b9c5360ce262a28988337 477 SUPERFAMILY SSF81442 11 466 3.79E-122 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_09510 99c0bed8f03b9c5360ce262a28988337 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 10 465 1.2E-228 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMBLS11_15650 63c0e2de035940525ed840221081ac9a 304 SMART SM00563 88 230 6.9E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_15650 63c0e2de035940525ed840221081ac9a 304 SUPERFAMILY SSF69593 26 289 5.36E-36 T 14-10-2018 AMBLS11_15650 63c0e2de035940525ed840221081ac9a 304 Pfam PF01553 Acyltransferase 75 227 5.5E-17 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_16500 484eb44847d51abd6a15e362abedd15f 488 Gene3D G3DSA:3.40.1670.10 337 454 1.1E-52 T 14-10-2018 AMBLS11_16500 484eb44847d51abd6a15e362abedd15f 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 3.4E-181 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AMBLS11_16500 484eb44847d51abd6a15e362abedd15f 488 SUPERFAMILY SSF143968 323 486 4.18E-68 T 14-10-2018 AMBLS11_16500 484eb44847d51abd6a15e362abedd15f 488 SUPERFAMILY SSF50475 3 322 9.02E-130 T 14-10-2018 AMBLS11_16500 484eb44847d51abd6a15e362abedd15f 488 Gene3D G3DSA:1.20.5.570 455 488 6.6E-15 T 14-10-2018 AMBLS11_16500 484eb44847d51abd6a15e362abedd15f 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.44 T 14-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AMBLS11_16500 484eb44847d51abd6a15e362abedd15f 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.5E-175 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 3.4E-23 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 694 3.3E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 Gene3D G3DSA:1.10.1040.50 498 710 1.5E-70 T 14-10-2018 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 Gene3D G3DSA:3.90.226.10 1 312 4.3E-96 T 14-10-2018 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 220 1.8E-37 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 SUPERFAMILY SSF48179 496 617 7.99E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 495 4.9E-60 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 SUPERFAMILY SSF48179 625 715 3.57E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 Gene3D G3DSA:3.40.50.720 315 497 2.2E-65 T 14-10-2018 AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 SUPERFAMILY SSF51735 318 496 1.58E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_02585 a6d966deaa6a265dea4974a3d8165a57 716 SUPERFAMILY SSF52096 2 304 2.18E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 Gene3D G3DSA:3.40.50.300 282 530 5.8E-55 T 14-10-2018 AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 SMART SM00382 344 512 3.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 SMART SM00382 26 238 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 Pfam PF00005 ABC transporter 18 184 1.0E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 Pfam PF12848 ABC transporter 224 306 2.1E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 SUPERFAMILY SSF52540 297 523 2.75E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 SUPERFAMILY SSF52540 4 239 3.9E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 Pfam PF00005 ABC transporter 336 467 1.8E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 Gene3D G3DSA:3.40.50.300 2 281 5.4E-55 T 14-10-2018 AMBLS11_04030 21c97a0f96dc97a48fe4506c38793a18 530 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_15325 519c0f59c6a71aa1020285938195650d 295 Gene3D G3DSA:3.40.190.290 90 285 1.5E-31 T 14-10-2018 AMBLS11_15325 519c0f59c6a71aa1020285938195650d 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.0E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_15325 519c0f59c6a71aa1020285938195650d 295 Pfam PF03466 LysR substrate binding domain 88 285 1.5E-33 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_15325 519c0f59c6a71aa1020285938195650d 295 SUPERFAMILY SSF53850 89 289 8.82E-34 T 14-10-2018 AMBLS11_15325 519c0f59c6a71aa1020285938195650d 295 Gene3D G3DSA:1.10.10.10 1 88 2.9E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15325 519c0f59c6a71aa1020285938195650d 295 SUPERFAMILY SSF46785 2 111 1.05E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 ProSitePatterns PS00501 Signal peptidases I serine active site. 84 91 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 62 273 6.5E-47 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 Gene3D G3DSA:2.170.230.10 150 232 1.8E-76 T 14-10-2018 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 Pfam PF10502 Signal peptidase, peptidase S26 230 270 2.3E-5 T 14-10-2018 IPR019533 Peptidase S26 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 SUPERFAMILY SSF51306 73 299 1.31E-68 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 ProSitePatterns PS00760 Signal peptidases I lysine active site. 141 153 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 ProSitePatterns PS00761 Signal peptidases I signature 3. 238 251 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 Gene3D G3DSA:2.10.109.10 73 273 1.8E-76 T 14-10-2018 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 139 151 7.6E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 233 252 7.6E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 75 91 7.6E-27 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMBLS11_12265 8bbb87540a6f158d4e46786e7f7de1ea 300 Pfam PF00717 Peptidase S24-like 81 162 6.9E-23 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 487 4.7E-123 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 Gene3D G3DSA:3.40.630.10 181 496 8.4E-137 T 14-10-2018 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 3.5E-33 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 39.778 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 SUPERFAMILY SSF52949 2 183 1.41E-49 T 14-10-2018 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 SUPERFAMILY SSF53187 180 494 2.1E-122 T 14-10-2018 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 Gene3D G3DSA:3.40.220.10 1 159 2.4E-57 T 14-10-2018 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 2.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 2.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 2.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 2.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_14920 f70443485dd127ac0326b3b159cc7e8f 501 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 2.7E-54 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 Gene3D G3DSA:3.40.50.720 16 103 8.3E-31 T 14-10-2018 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 SUPERFAMILY SSF53244 319 466 1.72E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 Gene3D G3DSA:3.40.1190.10 104 317 1.4E-82 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 Pfam PF01225 Mur ligase family, catalytic domain 18 114 6.1E-23 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 Pfam PF08245 Mur ligase middle domain 120 300 2.4E-31 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 Gene3D G3DSA:3.90.190.20 318 479 6.1E-50 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 SUPERFAMILY SSF51984 16 102 9.42E-28 T 14-10-2018 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 472 43.197 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 410 1.6E-20 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 SUPERFAMILY SSF53623 101 318 3.01E-74 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMBLS11_14035 0dd7d7aa7d64aa2d1e95b62439a7df0f 481 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 17 464 7.0E-176 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_04190 976c627ed562ed7d591320d4d7439f08 408 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMBLS11_04190 976c627ed562ed7d591320d4d7439f08 408 Gene3D G3DSA:3.40.50.300 1 209 7.9E-70 T 14-10-2018 AMBLS11_04190 976c627ed562ed7d591320d4d7439f08 408 Gene3D G3DSA:3.40.50.300 216 385 1.9E-51 T 14-10-2018 AMBLS11_04190 976c627ed562ed7d591320d4d7439f08 408 SUPERFAMILY SSF52540 74 357 1.29E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04190 976c627ed562ed7d591320d4d7439f08 408 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.8E-43 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_04190 976c627ed562ed7d591320d4d7439f08 408 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 1 408 49.841 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AMBLS11_04190 976c627ed562ed7d591320d4d7439f08 408 SMART SM00487 20 222 3.2E-54 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_04190 976c627ed562ed7d591320d4d7439f08 408 Pfam PF00271 Helicase conserved C-terminal domain 233 340 8.0E-33 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_04190 976c627ed562ed7d591320d4d7439f08 408 SMART SM00490 259 340 2.8E-33 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_13990 533b80ace59ec6f28f5b826061ed9b4a 290 SUPERFAMILY SSF53187 3 288 2.88E-67 T 14-10-2018 AMBLS11_13990 533b80ace59ec6f28f5b826061ed9b4a 290 Hamap MF_00704 Probable aspartoacylase. 1 290 28.984 T 14-10-2018 IPR016708 Aspartoacylase GO:0016811 AMBLS11_13990 533b80ace59ec6f28f5b826061ed9b4a 290 PIRSF PIRSF018001 1 290 9.3E-75 T 14-10-2018 IPR016708 Aspartoacylase GO:0016811 AMBLS11_13990 533b80ace59ec6f28f5b826061ed9b4a 290 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 4 282 2.8E-43 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AMBLS11_13990 533b80ace59ec6f28f5b826061ed9b4a 290 Gene3D G3DSA:2.20.25.160 217 264 1.9E-102 T 14-10-2018 AMBLS11_13990 533b80ace59ec6f28f5b826061ed9b4a 290 Gene3D G3DSA:3.40.630.10 5 287 1.9E-102 T 14-10-2018 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 PRINTS PR00959 Mevalonate kinase family signature 160 179 2.5E-44 T 14-10-2018 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 PRINTS PR00959 Mevalonate kinase family signature 326 343 2.5E-44 T 14-10-2018 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 PRINTS PR00959 Mevalonate kinase family signature 24 48 2.5E-44 T 14-10-2018 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 PRINTS PR00959 Mevalonate kinase family signature 117 139 2.5E-44 T 14-10-2018 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 Pfam PF10509 Galactokinase galactose-binding signature 9 56 5.1E-23 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 PIRSF PIRSF000530 2 380 9.1E-118 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 Gene3D G3DSA:3.30.70.890 200 354 1.2E-125 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 SUPERFAMILY SSF55060 203 378 1.36E-49 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 TIGRFAM TIGR00131 gal_kin: galactokinase 5 377 4.7E-127 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 SUPERFAMILY SSF54211 7 201 1.37E-62 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 Pfam PF08544 GHMP kinases C terminal 278 358 1.1E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 Pfam PF00288 GHMP kinases N terminal domain 113 180 4.7E-15 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 Gene3D G3DSA:3.30.230.10 21 199 1.2E-125 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 Hamap MF_00246 Galactokinase [galK]. 24 379 41.563 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 PRINTS PR00473 Galactokinase signature 110 128 1.0E-28 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 PRINTS PR00473 Galactokinase signature 26 44 1.0E-28 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 PRINTS PR00473 Galactokinase signature 261 275 1.0E-28 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 PRINTS PR00473 Galactokinase signature 90 101 1.0E-28 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMBLS11_00930 c651cdafe8c3e98f96fe7501194dc60b 380 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 119 130 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 36.749 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 Gene3D G3DSA:3.90.226.10 23 281 2.7E-87 T 14-10-2018 AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 7.6E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 7.6E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 7.6E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 7.6E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 7.6E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 SUPERFAMILY SSF52096 23 278 9.02E-88 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 Pfam PF01039 Carboxyl transferase domain 97 238 6.5E-16 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMBLS11_11480 147edba32b50e956a6e0f064f520daf8 281 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 278 3.9E-133 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 Gene3D G3DSA:3.30.70.1320 136 328 2.3E-240 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 Gene3D G3DSA:1.20.1640.10 10 501 2.3E-240 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 Gene3D G3DSA:1.20.1640.10 502 1002 2.3E-240 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 Gene3D G3DSA:3.30.2090.10 702 792 2.3E-240 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 SUPERFAMILY SSF82714 184 266 1.06E-6 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 SUPERFAMILY SSF82866 293 492 6.41E-34 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 Gene3D G3DSA:3.30.70.1430 552 650 2.3E-240 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 Gene3D G3DSA:3.30.2090.10 179 271 2.3E-240 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 7.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 7.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 7.8E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 Pfam PF00873 AcrB/AcrD/AcrF family 3 1005 3.7E-155 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 SUPERFAMILY SSF82866 791 1008 3.53E-44 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 SUPERFAMILY SSF82693 136 325 1.31E-19 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 SUPERFAMILY SSF82693 40 135 2.35E-20 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 Gene3D G3DSA:3.30.70.1440 651 850 2.3E-240 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 Gene3D G3DSA:3.30.70.1430 40 800 2.3E-240 T 14-10-2018 AMBLS11_06235 c0ff9f7a811a924fae2f399340cae0ab 1013 SUPERFAMILY SSF82714 708 784 1.57E-5 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_07445 19d7b14444b9236ae9f8121b701dc740 304 Pfam PF00535 Glycosyl transferase family 2 9 147 7.5E-31 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_07445 19d7b14444b9236ae9f8121b701dc740 304 Gene3D G3DSA:3.90.550.10 1 244 1.3E-71 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07445 19d7b14444b9236ae9f8121b701dc740 304 SUPERFAMILY SSF53448 6 222 3.25E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16170 2c7ef6d2ca31af08ad45eea18adf097d 252 SUPERFAMILY SSF53067 118 242 7.77E-24 T 14-10-2018 AMBLS11_16170 2c7ef6d2ca31af08ad45eea18adf097d 252 Hamap MF_01274 Type III pantothenate kinase [coaX]. 8 246 15.258 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMBLS11_16170 2c7ef6d2ca31af08ad45eea18adf097d 252 Pfam PF03309 Type III pantothenate kinase 10 191 7.6E-36 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMBLS11_16170 2c7ef6d2ca31af08ad45eea18adf097d 252 SUPERFAMILY SSF53067 10 113 1.23E-18 T 14-10-2018 AMBLS11_16170 2c7ef6d2ca31af08ad45eea18adf097d 252 Gene3D G3DSA:3.30.420.40 11 239 2.0E-50 T 14-10-2018 AMBLS11_16170 2c7ef6d2ca31af08ad45eea18adf097d 252 Gene3D G3DSA:3.30.420.490 119 231 2.0E-50 T 14-10-2018 AMBLS11_16170 2c7ef6d2ca31af08ad45eea18adf097d 252 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 10 241 2.0E-27 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMBLS11_02330 4d371e4a77cc981458d7d7d66b32cbf1 432 Pfam PF01546 Peptidase family M20/M25/M40 95 424 7.3E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMBLS11_02330 4d371e4a77cc981458d7d7d66b32cbf1 432 PIRSF PIRSF005962 21 432 2.2E-119 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 AMBLS11_02330 4d371e4a77cc981458d7d7d66b32cbf1 432 Gene3D G3DSA:3.40.630.10 37 412 4.3E-134 T 14-10-2018 AMBLS11_02330 4d371e4a77cc981458d7d7d66b32cbf1 432 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 38 417 1.4E-107 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 AMBLS11_02330 4d371e4a77cc981458d7d7d66b32cbf1 432 SUPERFAMILY SSF55031 221 327 8.9E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMBLS11_02330 4d371e4a77cc981458d7d7d66b32cbf1 432 Pfam PF07687 Peptidase dimerisation domain 223 318 8.1E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMBLS11_02330 4d371e4a77cc981458d7d7d66b32cbf1 432 Gene3D G3DSA:3.30.70.360 218 335 4.3E-134 T 14-10-2018 AMBLS11_02330 4d371e4a77cc981458d7d7d66b32cbf1 432 SUPERFAMILY SSF53187 27 430 3.83E-85 T 14-10-2018 AMBLS11_03505 67ce4c30e1efbfb162b4197245a9df85 221 Pfam PF00072 Response regulator receiver domain 3 113 7.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03505 67ce4c30e1efbfb162b4197245a9df85 221 SMART SM00862 145 216 5.8E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_03505 67ce4c30e1efbfb162b4197245a9df85 221 SMART SM00448 1 112 4.7E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03505 67ce4c30e1efbfb162b4197245a9df85 221 SUPERFAMILY SSF52172 1 177 3.13E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_03505 67ce4c30e1efbfb162b4197245a9df85 221 Gene3D G3DSA:1.10.10.10 122 220 1.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03505 67ce4c30e1efbfb162b4197245a9df85 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 5.5E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_03505 67ce4c30e1efbfb162b4197245a9df85 221 Gene3D G3DSA:3.40.50.2300 1 121 6.5E-38 T 14-10-2018 AMBLS11_17415 10593f6116591550110cbe5f8987dcbb 362 Gene3D G3DSA:2.40.420.20 38 336 8.5E-46 T 14-10-2018 AMBLS11_17415 10593f6116591550110cbe5f8987dcbb 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 350 6.0E-54 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_17415 10593f6116591550110cbe5f8987dcbb 362 SUPERFAMILY SSF111369 53 240 4.58E-15 T 14-10-2018 AMBLS11_17415 10593f6116591550110cbe5f8987dcbb 362 Gene3D G3DSA:2.40.30.170 50 277 8.5E-46 T 14-10-2018 AMBLS11_17415 10593f6116591550110cbe5f8987dcbb 362 Gene3D G3DSA:1.10.287.470 95 169 8.5E-46 T 14-10-2018 AMBLS11_17415 10593f6116591550110cbe5f8987dcbb 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 260 1.6E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_17415 10593f6116591550110cbe5f8987dcbb 362 Gene3D G3DSA:2.40.50.100 62 201 8.5E-46 T 14-10-2018 AMBLS11_04300 a013f6a643d84eb22035903005b02e12 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 2.0E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_04300 a013f6a643d84eb22035903005b02e12 234 Gene3D G3DSA:1.10.10.10 121 233 5.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_04300 a013f6a643d84eb22035903005b02e12 234 SMART SM00862 150 226 8.0E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_04300 a013f6a643d84eb22035903005b02e12 234 SUPERFAMILY SSF52172 1 129 2.56E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_04300 a013f6a643d84eb22035903005b02e12 234 SMART SM00448 2 112 6.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_04300 a013f6a643d84eb22035903005b02e12 234 Gene3D G3DSA:3.40.50.2300 1 120 7.5E-30 T 14-10-2018 AMBLS11_04300 a013f6a643d84eb22035903005b02e12 234 SUPERFAMILY SSF46894 126 227 2.24E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_04300 a013f6a643d84eb22035903005b02e12 234 Pfam PF00072 Response regulator receiver domain 5 113 9.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SMART SM00091 261 329 0.12 T 14-10-2018 IPR000014 PAS domain AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SMART SM00091 381 451 1.7 T 14-10-2018 IPR000014 PAS domain AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SMART SM00091 503 573 1.1 T 14-10-2018 IPR000014 PAS domain AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SMART SM00091 137 207 0.3 T 14-10-2018 IPR000014 PAS domain AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Pfam PF13426 PAS domain 155 253 8.7E-16 T 14-10-2018 IPR000014 PAS domain AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 268 377 1.9E-15 T 14-10-2018 IPR000014 PAS domain AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 513 625 4.6E-13 T 14-10-2018 IPR000014 PAS domain AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 149 257 3.7E-18 T 14-10-2018 IPR000014 PAS domain AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 391 499 9.2E-16 T 14-10-2018 IPR000014 PAS domain AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SUPERFAMILY SSF58104 638 920 7.98E-74 T 14-10-2018 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 769 796 3.5E-55 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 798 827 3.5E-55 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 846 875 3.5E-55 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 692 721 3.5E-55 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Gene3D G3DSA:3.30.450.20 22 132 1.8E-6 T 14-10-2018 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Gene3D G3DSA:1.10.287.950 621 920 8.8E-85 T 14-10-2018 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SUPERFAMILY SSF55785 516 617 1.1E-23 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SUPERFAMILY SSF55785 269 373 1.47E-25 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SUPERFAMILY SSF55785 394 495 2.79E-25 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SUPERFAMILY SSF55785 149 251 6.98E-26 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SMART SM00283 671 918 8.4E-91 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Pfam PF08447 PAS fold 405 491 1.4E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Pfam PF08447 PAS fold 284 369 4.9E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Pfam PF08447 PAS fold 528 613 1.0E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SMART SM00086 578 620 0.0037 T 14-10-2018 IPR001610 PAC motif AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SMART SM00086 456 498 3.4 T 14-10-2018 IPR001610 PAC motif AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SMART SM00086 212 254 2.2E-6 T 14-10-2018 IPR001610 PAC motif AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 SMART SM00086 334 376 0.0016 T 14-10-2018 IPR001610 PAC motif AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Gene3D G3DSA:3.30.450.20 514 618 8.2E-21 T 14-10-2018 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Gene3D G3DSA:3.30.450.20 379 508 1.6E-22 T 14-10-2018 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Gene3D G3DSA:3.30.450.20 133 269 4.7E-28 T 14-10-2018 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Gene3D G3DSA:3.30.450.20 270 375 9.2E-21 T 14-10-2018 AMBLS11_01515 bf19577f5efbab0c093d531909b30c4f 967 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 731 886 6.6E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 SUPERFAMILY SSF54980 365 421 7.12E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 4.6E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.8E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.085 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 360 7.8E-156 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 9.7E-31 T 14-10-2018 IPR025121 GTPase HflX, N-terminal AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 Gene3D G3DSA:3.40.50.300 197 368 2.0E-38 T 14-10-2018 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 Gene3D G3DSA:3.40.50.11060 17 138 4.6E-38 T 14-10-2018 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 PIRSF PIRSF006809 3 421 3.4E-149 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.5E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.5E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.5E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_17285 5e5bb45fc0d3c840df5fd6791bc18dd6 429 SUPERFAMILY SSF52540 197 372 2.93E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04505 442d7cc4099332f36990b863b5001d3c 457 SUPERFAMILY SSF53448 8 284 1.13E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04505 442d7cc4099332f36990b863b5001d3c 457 Pfam PF00483 Nucleotidyl transferase 17 282 6.1E-53 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMBLS11_04505 442d7cc4099332f36990b863b5001d3c 457 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 11 413 41.95 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMBLS11_04505 442d7cc4099332f36990b863b5001d3c 457 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 205 215 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMBLS11_04505 442d7cc4099332f36990b863b5001d3c 457 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 15 387 5.6E-134 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMBLS11_04505 442d7cc4099332f36990b863b5001d3c 457 Gene3D G3DSA:3.90.550.10 4 295 1.9E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04505 442d7cc4099332f36990b863b5001d3c 457 Gene3D G3DSA:2.160.10.10 296 419 5.7E-29 T 14-10-2018 AMBLS11_04505 442d7cc4099332f36990b863b5001d3c 457 SUPERFAMILY SSF51161 318 405 4.99E-14 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 Gene3D G3DSA:1.10.10.10 1 85 3.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 Gene3D G3DSA:3.40.190.10 87 291 6.6E-52 T 14-10-2018 AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 Pfam PF03466 LysR substrate binding domain 93 291 1.5E-21 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 Gene3D G3DSA:3.40.190.10 168 266 6.6E-52 T 14-10-2018 AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 SUPERFAMILY SSF53850 87 293 1.99E-36 T 14-10-2018 AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13915 58c369ceea327910f9f026bd9d6ef9f0 360 SUPERFAMILY SSF46785 2 82 8.55E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_06785 8f18f0b983b4671abffd31f460e258d5 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 8.8E-16 T 14-10-2018 AMBLS11_06785 8f18f0b983b4671abffd31f460e258d5 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 8.8E-16 T 14-10-2018 AMBLS11_06785 8f18f0b983b4671abffd31f460e258d5 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 8.8E-16 T 14-10-2018 AMBLS11_06785 8f18f0b983b4671abffd31f460e258d5 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 8.8E-16 T 14-10-2018 AMBLS11_06785 8f18f0b983b4671abffd31f460e258d5 398 Pfam PF01494 FAD binding domain 5 307 3.8E-27 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMBLS11_06785 8f18f0b983b4671abffd31f460e258d5 398 Gene3D G3DSA:3.50.50.60 260 398 7.2E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_06785 8f18f0b983b4671abffd31f460e258d5 398 Gene3D G3DSA:3.50.50.60 1 196 1.3E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_06785 8f18f0b983b4671abffd31f460e258d5 398 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 396 7.6E-106 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AMBLS11_06785 8f18f0b983b4671abffd31f460e258d5 398 SUPERFAMILY SSF51905 2 388 6.85E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_02285 f2ac74682786e94f095829868594bb48 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 237 15.962 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMBLS11_02285 f2ac74682786e94f095829868594bb48 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 219 1.4E-64 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMBLS11_02285 f2ac74682786e94f095829868594bb48 251 ProSitePatterns PS01218 TatC family signature. 152 171 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AMBLS11_02285 f2ac74682786e94f095829868594bb48 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 83 101 7.3E-48 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMBLS11_02285 f2ac74682786e94f095829868594bb48 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 6 33 7.3E-48 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMBLS11_02285 f2ac74682786e94f095829868594bb48 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 101 127 7.3E-48 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMBLS11_02285 f2ac74682786e94f095829868594bb48 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 152 180 7.3E-48 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMBLS11_02285 f2ac74682786e94f095829868594bb48 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 7 224 3.7E-73 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMBLS11_06825 917b3821cf5bd59b0052c1206e247585 206 Gene3D G3DSA:2.30.110.10 13 206 3.1E-57 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMBLS11_06825 917b3821cf5bd59b0052c1206e247585 206 Pfam PF01613 Flavin reductase like domain 26 169 1.1E-19 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMBLS11_06825 917b3821cf5bd59b0052c1206e247585 206 SMART SM00903 22 176 2.4E-14 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMBLS11_06825 917b3821cf5bd59b0052c1206e247585 206 SUPERFAMILY SSF50475 3 194 2.21E-48 T 14-10-2018 AMBLS11_02300 385d6fedb0b5c7dee7fef5e238c18b44 632 Gene3D G3DSA:3.30.70.270 449 625 3.1E-56 T 14-10-2018 AMBLS11_02300 385d6fedb0b5c7dee7fef5e238c18b44 632 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 459 624 3.2E-50 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_02300 385d6fedb0b5c7dee7fef5e238c18b44 632 SUPERFAMILY SSF55073 468 624 3.53E-46 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_02300 385d6fedb0b5c7dee7fef5e238c18b44 632 Pfam PF07695 7TM diverse intracellular signalling 191 392 7.0E-39 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AMBLS11_02300 385d6fedb0b5c7dee7fef5e238c18b44 632 Gene3D G3DSA:2.60.40.2380 38 187 1.3E-16 T 14-10-2018 AMBLS11_02300 385d6fedb0b5c7dee7fef5e238c18b44 632 Pfam PF07696 7TMR-DISM extracellular 2 45 179 2.6E-20 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AMBLS11_02300 385d6fedb0b5c7dee7fef5e238c18b44 632 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 622 2.8E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_02300 385d6fedb0b5c7dee7fef5e238c18b44 632 SMART SM00267 452 626 8.1E-66 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_12620 b977fcd382f0cda44c6102e0e5864bc0 154 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 31 121 6.2E-13 T 14-10-2018 IPR031982 Type IV minor pilin ComP AMBLS11_12620 b977fcd382f0cda44c6102e0e5864bc0 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 3.9E-8 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMBLS11_12620 b977fcd382f0cda44c6102e0e5864bc0 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 3.9E-8 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMBLS11_12620 b977fcd382f0cda44c6102e0e5864bc0 154 SUPERFAMILY SSF54523 10 137 1.1E-18 T 14-10-2018 AMBLS11_12620 b977fcd382f0cda44c6102e0e5864bc0 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 9.4E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12620 b977fcd382f0cda44c6102e0e5864bc0 154 Gene3D G3DSA:3.30.700.10 10 154 4.1E-20 T 14-10-2018 AMBLS11_12620 b977fcd382f0cda44c6102e0e5864bc0 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12620 b977fcd382f0cda44c6102e0e5864bc0 154 ProSitePatterns PS00018 EF-hand calcium-binding domain. 138 150 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMBLS11_12620 b977fcd382f0cda44c6102e0e5864bc0 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 4.2E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 SUPERFAMILY SSF51735 23 186 6.94E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 35 158 4.0E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 179 269 8.6E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 Gene3D G3DSA:3.40.50.720 37 336 1.5E-79 T 14-10-2018 AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 Gene3D G3DSA:3.30.360.10 163 358 1.5E-79 T 14-10-2018 AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 86 102 2.0E-15 T 14-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 32 45 2.0E-15 T 14-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 239 255 2.0E-15 T 14-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 148 162 2.0E-15 T 14-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 329 345 2.0E-15 T 14-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AMBLS11_15060 2b2547e1f3700cd37aa42433b9518564 362 SUPERFAMILY SSF55347 162 342 3.76E-22 T 14-10-2018 AMBLS11_05595 fe1ee9bf16a53ac68c5b25a369721d76 405 SUPERFAMILY SSF103473 23 397 1.57E-37 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_05595 fe1ee9bf16a53ac68c5b25a369721d76 405 PIRSF PIRSF004925 18 405 3.8E-90 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter AMBLS11_05595 fe1ee9bf16a53ac68c5b25a369721d76 405 Gene3D G3DSA:1.20.1250.20 206 404 5.9E-34 T 14-10-2018 AMBLS11_05595 fe1ee9bf16a53ac68c5b25a369721d76 405 Gene3D G3DSA:1.20.1250.20 19 205 3.6E-15 T 14-10-2018 AMBLS11_05595 fe1ee9bf16a53ac68c5b25a369721d76 405 Pfam PF12832 MFS_1 like family 24 377 6.1E-76 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain AMBLS11_15410 6eb6980f4b6785706c418252bd11f0e1 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 519 1.0E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15410 6eb6980f4b6785706c418252bd11f0e1 522 Pfam PF07730 Histidine kinase 327 381 5.6E-8 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMBLS11_15410 6eb6980f4b6785706c418252bd11f0e1 522 SUPERFAMILY SSF55874 401 518 4.06E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15410 6eb6980f4b6785706c418252bd11f0e1 522 Gene3D G3DSA:3.30.565.10 394 520 1.6E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15410 6eb6980f4b6785706c418252bd11f0e1 522 Pfam PF05231 MASE1 13 292 6.8E-16 T 14-10-2018 IPR007895 MASE1 AMBLS11_15410 6eb6980f4b6785706c418252bd11f0e1 522 SMART SM00387 424 521 1.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_06410 8d11bdceb25f7c26349197f733e76f0f 606 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_06410 8d11bdceb25f7c26349197f733e76f0f 606 SMART SM00382 379 559 8.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_06410 8d11bdceb25f7c26349197f733e76f0f 606 Pfam PF00005 ABC transporter 370 519 2.0E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_06410 8d11bdceb25f7c26349197f733e76f0f 606 SUPERFAMILY SSF52540 344 589 6.23E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06410 8d11bdceb25f7c26349197f733e76f0f 606 SUPERFAMILY SSF90123 13 336 7.85E-60 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_06410 8d11bdceb25f7c26349197f733e76f0f 606 Pfam PF00664 ABC transporter transmembrane region 33 308 6.6E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMBLS11_06410 8d11bdceb25f7c26349197f733e76f0f 606 Gene3D G3DSA:3.40.50.300 345 605 2.2E-96 T 14-10-2018 AMBLS11_06410 8d11bdceb25f7c26349197f733e76f0f 606 Gene3D G3DSA:1.20.1560.10 22 344 6.8E-108 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 40.295 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 Pfam PF00342 Phosphoglucose isomerase 49 539 4.7E-208 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 Gene3D G3DSA:3.40.50.10490 10 504 2.1E-220 T 14-10-2018 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 SUPERFAMILY SSF53697 4 545 5.0E-208 T 14-10-2018 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 Gene3D G3DSA:3.40.50.10490 95 289 2.1E-220 T 14-10-2018 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 Gene3D G3DSA:1.10.1390.10 505 546 6.9E-17 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 9.4E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 9.4E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 9.4E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 9.4E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 9.4E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_14310 34f476239c820b62f332be8a3f93fa34 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 9.4E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_03080 559364b4fb4441d0fcc3dd489c91b1ed 255 Gene3D G3DSA:3.40.225.10 8 255 2.2E-67 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMBLS11_03080 559364b4fb4441d0fcc3dd489c91b1ed 255 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 201 9.3E-41 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMBLS11_03080 559364b4fb4441d0fcc3dd489c91b1ed 255 SUPERFAMILY SSF53639 16 222 1.26E-55 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMBLS11_03080 559364b4fb4441d0fcc3dd489c91b1ed 255 SMART SM01007 22 201 6.7E-53 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 SUPERFAMILY SSF51011 1007 1129 1.58E-31 T 14-10-2018 AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 Pfam PF03714 Bacterial pullanase-associated domain 121 219 3.4E-11 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 Gene3D G3DSA:3.20.20.80 478 1039 4.0E-185 T 14-10-2018 AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 Gene3D G3DSA:2.60.40.1180 1044 1131 1.7E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 Gene3D G3DSA:2.60.40.10 371 477 6.7E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 SUPERFAMILY SSF81296 377 481 4.2E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 SUPERFAMILY SSF81296 242 366 3.36E-29 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 Gene3D G3DSA:2.60.40.1110 105 239 9.6E-30 T 14-10-2018 AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 SUPERFAMILY SSF51445 476 1004 4.56E-112 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 Pfam PF11852 Domain of unknown function (DUF3372) 945 1118 1.1E-56 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 379 463 3.8E-13 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 Gene3D G3DSA:2.60.40.1130 252 365 2.9E-27 T 14-10-2018 AMBLS11_08945 9a173aec8a99f338d336c8de8783a182 1472 SUPERFAMILY SSF49452 101 238 1.28E-32 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMBLS11_07765 5c91673f4004887ead25eecbe9d0ea73 500 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 63 455 6.5E-126 T 14-10-2018 IPR020010 Conserved hypothetical protein CHP03503 AMBLS11_13730 26c68a952541c14d929d0cad9af6ce16 324 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 62 242 4.1E-11 T 14-10-2018 IPR000477 Reverse transcriptase domain AMBLS11_13730 26c68a952541c14d929d0cad9af6ce16 324 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 97 111 1.9E-12 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AMBLS11_13730 26c68a952541c14d929d0cad9af6ce16 324 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 179 192 1.9E-12 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AMBLS11_13730 26c68a952541c14d929d0cad9af6ce16 324 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 194 205 1.9E-12 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AMBLS11_13730 26c68a952541c14d929d0cad9af6ce16 324 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 113 131 1.9E-12 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AMBLS11_13730 26c68a952541c14d929d0cad9af6ce16 324 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 244 250 1.9E-12 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AMBLS11_13730 26c68a952541c14d929d0cad9af6ce16 324 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 53 66 1.9E-12 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AMBLS11_13730 26c68a952541c14d929d0cad9af6ce16 324 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 67 79 1.9E-12 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AMBLS11_13730 26c68a952541c14d929d0cad9af6ce16 324 SUPERFAMILY SSF56672 98 238 2.22E-6 T 14-10-2018 AMBLS11_01850 3cbf223c82082ca4a76328080ccd7036 307 PIRSF PIRSF016660 1 307 3.3E-111 T 14-10-2018 IPR008526 Inner membrane protein YedI AMBLS11_01850 3cbf223c82082ca4a76328080ccd7036 307 Pfam PF05661 Protein of unknown function (DUF808) 5 294 1.8E-105 T 14-10-2018 IPR008526 Inner membrane protein YedI AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 Pfam PF00453 Ribosomal protein L20 3 109 6.5E-50 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 14-10-2018 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.2E-53 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 Gene3D G3DSA:1.10.1900.20 56 118 7.7E-30 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 Gene3D G3DSA:1.10.720.90 2 55 9.0E-24 T 14-10-2018 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.084 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_07325 ec5c4ad40b35955af5a63fb4c6cf5115 118 SUPERFAMILY SSF74731 3 117 1.18E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 SUPERFAMILY SSF51905 3 530 3.52E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 SUPERFAMILY SSF54373 290 472 1.57E-60 T 14-10-2018 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 Pfam PF05199 GMC oxidoreductase 386 522 4.3E-41 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 Gene3D G3DSA:4.10.450.10 37 196 6.9E-181 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 Gene3D G3DSA:3.50.50.60 4 526 6.9E-181 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 PIRSF PIRSF000137 1 533 4.8E-155 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 Gene3D G3DSA:1.10.1220.110 96 149 6.9E-181 T 14-10-2018 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 Pfam PF00732 GMC oxidoreductase 4 295 7.5E-96 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 TIGRFAM TIGR01810 betA: choline dehydrogenase 5 532 4.2E-237 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AMBLS11_13375 267b111b86d3383f16db4e93048dcdd9 550 Gene3D G3DSA:3.30.410.40 150 469 6.9E-181 T 14-10-2018 AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 SUPERFAMILY SSF51735 7 259 2.84E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 8.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 8.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 8.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 8.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 184 0.0012 T 14-10-2018 AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 Gene3D G3DSA:3.40.50.720 5 261 1.3E-51 T 14-10-2018 AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 Pfam PF00106 short chain dehydrogenase 9 190 8.1E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_08220 c2ae0d26f2ac3e8aa6d5e99bdabf9102 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11080 a61541c559387689f2d19cfe2e457c73 327 Gene3D G3DSA:3.60.10.10 101 324 9.4E-24 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_11080 a61541c559387689f2d19cfe2e457c73 327 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 110 313 1.0E-15 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMBLS11_11080 a61541c559387689f2d19cfe2e457c73 327 SUPERFAMILY SSF56219 102 321 4.84E-30 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 Pfam PF00072 Response regulator receiver domain 6 116 6.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 SMART SM00448 3 116 4.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 SMART SM00421 151 208 1.0E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 SUPERFAMILY SSF46894 149 213 1.46E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 SUPERFAMILY SSF52172 2 134 5.41E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 1.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14355 61bff03d10aeeeeee2c8080422caad07 214 Gene3D G3DSA:3.40.50.12740 4 214 3.3E-61 T 14-10-2018 AMBLS11_10595 a68631400044085fe7f659747e877996 471 Pfam PF00128 Alpha amylase, catalytic domain 44 235 2.0E-16 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_10595 a68631400044085fe7f659747e877996 471 Gene3D G3DSA:3.20.20.80 23 391 4.9E-81 T 14-10-2018 AMBLS11_10595 a68631400044085fe7f659747e877996 471 PRINTS PR00110 Alpha-amylase signature 248 266 1.3E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMBLS11_10595 a68631400044085fe7f659747e877996 471 PRINTS PR00110 Alpha-amylase signature 100 111 1.3E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMBLS11_10595 a68631400044085fe7f659747e877996 471 PRINTS PR00110 Alpha-amylase signature 219 230 1.3E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMBLS11_10595 a68631400044085fe7f659747e877996 471 PRINTS PR00110 Alpha-amylase signature 314 326 1.3E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMBLS11_10595 a68631400044085fe7f659747e877996 471 PRINTS PR00110 Alpha-amylase signature 67 84 1.3E-15 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMBLS11_10595 a68631400044085fe7f659747e877996 471 SMART SM00642 26 386 3.4E-33 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_10595 a68631400044085fe7f659747e877996 471 SUPERFAMILY SSF51445 26 387 2.85E-59 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_17685 97c56970f0e573a4ee1bca32a9eb7d38 162 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 46 62 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMBLS11_17685 97c56970f0e573a4ee1bca32a9eb7d38 162 Gene3D G3DSA:3.30.160.20 26 161 1.4E-37 T 14-10-2018 AMBLS11_17685 97c56970f0e573a4ee1bca32a9eb7d38 162 SUPERFAMILY SSF75620 32 137 5.89E-11 T 14-10-2018 AMBLS11_17685 97c56970f0e573a4ee1bca32a9eb7d38 162 Pfam PF00472 RF-1 domain 33 157 2.9E-21 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 Gene3D G3DSA:3.30.565.10 189 331 4.9E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 SUPERFAMILY SSF47384 106 184 3.73E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 SUPERFAMILY SSF55874 173 330 5.76E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 311 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 259 273 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 227 329 5.8E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 Pfam PF00512 His Kinase A (phospho-acceptor) domain 118 183 4.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 Gene3D G3DSA:1.10.287.130 108 183 2.0E-13 T 14-10-2018 AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 Gene3D G3DSA:1.20.120.620 2 107 1.5E-17 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 SMART SM00387 224 332 4.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 Pfam PF13493 Domain of unknown function (DUF4118) 10 110 6.7E-22 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain AMBLS11_06380 d92acc913a28bcd520e3a2687ef503c3 332 SMART SM00388 116 184 1.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_04825 2d0522e69ce8a847de55b9bff6f0ade1 296 Gene3D G3DSA:3.40.50.720 6 277 3.8E-55 T 14-10-2018 AMBLS11_04825 2d0522e69ce8a847de55b9bff6f0ade1 296 Gene3D G3DSA:3.90.25.10 160 291 3.8E-55 T 14-10-2018 AMBLS11_04825 2d0522e69ce8a847de55b9bff6f0ade1 296 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 223 3.6E-35 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMBLS11_04825 2d0522e69ce8a847de55b9bff6f0ade1 296 SUPERFAMILY SSF51735 3 293 1.45E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11895 e26f62817a1abe61ebbe9c27831d9404 212 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 27 43 1.4E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMBLS11_11895 e26f62817a1abe61ebbe9c27831d9404 212 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 90 102 1.4E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMBLS11_11895 e26f62817a1abe61ebbe9c27831d9404 212 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 154 173 1.4E-16 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMBLS11_11895 e26f62817a1abe61ebbe9c27831d9404 212 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 14 194 1.7E-45 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMBLS11_11895 e26f62817a1abe61ebbe9c27831d9404 212 Gene3D G3DSA:2.10.109.10 25 193 1.2E-42 T 14-10-2018 AMBLS11_11895 e26f62817a1abe61ebbe9c27831d9404 212 SUPERFAMILY SSF51306 25 204 1.05E-51 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMBLS11_11895 e26f62817a1abe61ebbe9c27831d9404 212 Gene3D G3DSA:2.170.230.10 101 153 1.2E-42 T 14-10-2018 AMBLS11_11895 e26f62817a1abe61ebbe9c27831d9404 212 Pfam PF00717 Peptidase S24-like 33 110 1.6E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMBLS11_05020 2cd07b058f001504708146362526cd36 374 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 351 5.6E-120 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AMBLS11_05020 2cd07b058f001504708146362526cd36 374 SUPERFAMILY SSF160544 249 352 1.23E-37 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMBLS11_05020 2cd07b058f001504708146362526cd36 374 Gene3D G3DSA:3.40.1690.10 215 356 8.6E-54 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMBLS11_05020 2cd07b058f001504708146362526cd36 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 270 285 2.6E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMBLS11_05020 2cd07b058f001504708146362526cd36 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 300 321 2.6E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMBLS11_05020 2cd07b058f001504708146362526cd36 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 2.6E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMBLS11_05020 2cd07b058f001504708146362526cd36 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 2.6E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMBLS11_05020 2cd07b058f001504708146362526cd36 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 2.6E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMBLS11_05020 2cd07b058f001504708146362526cd36 374 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 345 1.5E-116 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMBLS11_00250 519c6a45e2cb8a136d021f2c66fee88d 78 SUPERFAMILY SSF143800 2 77 7.85E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_00250 519c6a45e2cb8a136d021f2c66fee88d 78 Gene3D G3DSA:2.30.170.40 2 78 4.4E-33 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_00250 519c6a45e2cb8a136d021f2c66fee88d 78 Pfam PF00830 Ribosomal L28 family 3 62 3.1E-26 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_00250 519c6a45e2cb8a136d021f2c66fee88d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.1E-27 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_00250 519c6a45e2cb8a136d021f2c66fee88d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.586 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_08935 d45e15d86575fa02aa8594cb18e3a0cf 507 Gene3D G3DSA:3.50.50.60 5 500 3.2E-181 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08935 d45e15d86575fa02aa8594cb18e3a0cf 507 SUPERFAMILY SSF51905 9 419 1.11E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08935 d45e15d86575fa02aa8594cb18e3a0cf 507 PIRSF PIRSF011396 4 502 1.9E-198 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AMBLS11_08935 d45e15d86575fa02aa8594cb18e3a0cf 507 Pfam PF04820 Tryptophan halogenase 11 465 3.6E-183 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMBLS11_11295 17f3b676808f8816d9509816d12385eb 151 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 97 1.4E-19 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMBLS11_11295 17f3b676808f8816d9509816d12385eb 151 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 33 80 1.1E-12 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMBLS11_11295 17f3b676808f8816d9509816d12385eb 151 Gene3D G3DSA:1.20.1290.10 4 150 5.3E-41 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMBLS11_11295 17f3b676808f8816d9509816d12385eb 151 SUPERFAMILY SSF69118 11 147 1.31E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMBLS11_18550 fd8b08ec9e85acd3bac999c315e87dbf 885 SMART SM00631 85 390 8.3E-4 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMBLS11_18550 fd8b08ec9e85acd3bac999c315e87dbf 885 Pfam PF00246 Zinc carboxypeptidase 92 255 8.6E-18 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMBLS11_18550 fd8b08ec9e85acd3bac999c315e87dbf 885 Gene3D G3DSA:3.40.630.10 80 353 9.8E-35 T 14-10-2018 AMBLS11_18550 fd8b08ec9e85acd3bac999c315e87dbf 885 SUPERFAMILY SSF53187 81 366 1.82E-55 T 14-10-2018 AMBLS11_18550 fd8b08ec9e85acd3bac999c315e87dbf 885 SUPERFAMILY SSF52317 645 879 3.43E-8 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_10680 26f630875d2e40027a31b0e2894d3fe3 159 Pfam PF01967 MoaC family 15 150 1.9E-52 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_10680 26f630875d2e40027a31b0e2894d3fe3 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 151 3.3E-60 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_10680 26f630875d2e40027a31b0e2894d3fe3 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 33.559 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_10680 26f630875d2e40027a31b0e2894d3fe3 159 Gene3D G3DSA:3.30.70.640 1 159 8.8E-66 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_10680 26f630875d2e40027a31b0e2894d3fe3 159 SUPERFAMILY SSF55040 11 155 6.54E-58 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_17485 c4fdb274e641d3c9c95bc6226c81f256 893 Gene3D G3DSA:2.60.120.430 731 892 1.4E-5 T 14-10-2018 AMBLS11_17485 c4fdb274e641d3c9c95bc6226c81f256 893 SUPERFAMILY SSF49785 550 727 1.96E-43 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_17485 c4fdb274e641d3c9c95bc6226c81f256 893 Gene3D G3DSA:2.60.120.200 40 334 9.2E-90 T 14-10-2018 AMBLS11_17485 c4fdb274e641d3c9c95bc6226c81f256 893 Pfam PF00722 Glycosyl hydrolases family 16 83 275 2.3E-26 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMBLS11_17485 c4fdb274e641d3c9c95bc6226c81f256 893 SUPERFAMILY SSF49785 367 545 1.06E-28 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_17485 c4fdb274e641d3c9c95bc6226c81f256 893 SUPERFAMILY SSF49899 38 328 1.46E-79 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMBLS11_17485 c4fdb274e641d3c9c95bc6226c81f256 893 SUPERFAMILY SSF49785 731 890 2.81E-39 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_05895 ec888d1bc39d316b3292c226e1385626 431 Pfam PF03471 Transporter associated domain 343 417 2.5E-17 T 14-10-2018 IPR005170 Transporter-associated domain AMBLS11_05895 ec888d1bc39d316b3292c226e1385626 431 SUPERFAMILY SSF54631 193 329 1.25E-26 T 14-10-2018 AMBLS11_05895 ec888d1bc39d316b3292c226e1385626 431 Gene3D G3DSA:3.10.580.10 187 341 2.4E-44 T 14-10-2018 AMBLS11_05895 ec888d1bc39d316b3292c226e1385626 431 Gene3D G3DSA:3.30.465.10 342 418 1.2E-26 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMBLS11_05895 ec888d1bc39d316b3292c226e1385626 431 SMART SM01091 342 419 1.8E-22 T 14-10-2018 IPR005170 Transporter-associated domain AMBLS11_05895 ec888d1bc39d316b3292c226e1385626 431 Pfam PF00571 CBS domain 277 325 2.2E-6 T 14-10-2018 IPR000644 CBS domain AMBLS11_05895 ec888d1bc39d316b3292c226e1385626 431 Pfam PF01595 Domain of unknown function DUF21 15 180 2.2E-45 T 14-10-2018 IPR002550 CNNM, transmembrane domain AMBLS11_05895 ec888d1bc39d316b3292c226e1385626 431 SUPERFAMILY SSF56176 341 424 1.15E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 Gene3D G3DSA:3.30.300.180 1 108 1.8E-34 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 Pfam PF11638 DnaA N-terminal domain 1 62 4.5E-21 T 14-10-2018 IPR024633 DnaA N-terminal domain AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 550 9.5E-185 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 Gene3D G3DSA:1.10.8.60 383 453 2.8E-24 T 14-10-2018 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 551 34.455 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 348 375 6.4E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 510 529 6.4E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 314 328 6.4E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 250 270 6.4E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 282 296 6.4E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 SMART SM00760 460 529 2.1E-44 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 SUPERFAMILY SSF52540 217 428 1.27E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 SUPERFAMILY SSF48295 449 551 3.14E-37 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 461 529 1.7E-31 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 Pfam PF00308 Bacterial dnaA protein 218 434 1.6E-98 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 Gene3D G3DSA:1.10.1750.10 459 552 1.8E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 Gene3D G3DSA:3.40.50.300 206 381 8.5E-49 T 14-10-2018 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 ProSitePatterns PS01008 DnaA protein signature. 510 529 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMBLS11_00005 57673b5cbad31adcdec300d5ad7cd3e7 552 SMART SM00382 249 451 8.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_05625 7496342cb73e214e1a0519fb80492ac6 862 SUPERFAMILY SSF56935 43 862 1.43E-100 T 14-10-2018 AMBLS11_05625 7496342cb73e214e1a0519fb80492ac6 862 Pfam PF00593 TonB dependent receptor 390 837 1.4E-36 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_05625 7496342cb73e214e1a0519fb80492ac6 862 Gene3D G3DSA:2.40.170.20 386 839 1.5E-51 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_05625 7496342cb73e214e1a0519fb80492ac6 862 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 181 1.4E-20 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_05625 7496342cb73e214e1a0519fb80492ac6 862 Gene3D G3DSA:2.170.130.10 40 185 4.8E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_16620 53f2d95223c78fa7d4ae5db21c5c84af 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 144 4.0E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_16620 53f2d95223c78fa7d4ae5db21c5c84af 705 SUPERFAMILY SSF56935 25 705 5.83E-90 T 14-10-2018 AMBLS11_16620 53f2d95223c78fa7d4ae5db21c5c84af 705 Gene3D G3DSA:2.170.130.10 22 149 6.6E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_16620 53f2d95223c78fa7d4ae5db21c5c84af 705 Gene3D G3DSA:2.40.170.20 160 705 3.1E-64 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_16620 53f2d95223c78fa7d4ae5db21c5c84af 705 Pfam PF00593 TonB dependent receptor 242 704 4.2E-29 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 Gene3D G3DSA:2.30.42.10 362 453 4.0E-25 T 14-10-2018 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 Pfam PF13180 PDZ domain 286 355 7.8E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 SUPERFAMILY SSF50156 222 347 2.76E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 SMART SM00228 371 444 3.7E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 SMART SM00228 264 346 1.8E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 450 1.2E-153 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 SUPERFAMILY SSF50156 384 452 4.21E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 Pfam PF13365 Trypsin-like peptidase domain 90 225 2.5E-32 T 14-10-2018 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 PRINTS PR00834 HtrA/DegQ protease family signature 304 316 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 PRINTS PR00834 HtrA/DegQ protease family signature 161 185 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 PRINTS PR00834 HtrA/DegQ protease family signature 121 141 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 PRINTS PR00834 HtrA/DegQ protease family signature 196 213 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 1.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 Gene3D G3DSA:2.40.10.120 37 258 1.1E-85 T 14-10-2018 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 440 5.2E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 SUPERFAMILY SSF50494 38 255 5.4E-66 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMBLS11_03665 880a6d0b579a3b840bdb607ab57b7c39 453 Gene3D G3DSA:2.30.42.10 259 361 6.8E-26 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 Gene3D G3DSA:3.30.70.1430 19 796 0.0 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 SUPERFAMILY SSF82714 701 788 4.97E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 Gene3D G3DSA:3.30.70.1440 648 844 0.0 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 Gene3D G3DSA:3.30.70.1430 547 647 0.0 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 SUPERFAMILY SSF82693 651 835 3.4E-29 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 SUPERFAMILY SSF82693 118 310 4.45E-24 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 Gene3D G3DSA:3.30.2090.10 159 255 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 Gene3D G3DSA:3.30.70.1320 113 312 0.0 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 Gene3D G3DSA:3.30.2090.10 700 788 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 Gene3D G3DSA:1.20.1640.10 1 492 0.0 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 Gene3D G3DSA:1.20.1640.10 493 1001 0.0 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 Pfam PF00873 AcrB/AcrD/AcrF family 1 1004 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 SUPERFAMILY SSF82693 545 648 6.28E-28 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 SUPERFAMILY SSF82866 276 477 1.57E-47 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 SUPERFAMILY SSF82866 810 1005 3.01E-45 T 14-10-2018 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1011 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 PRINTS PR00702 Acriflavin resistance protein family signature 532 549 4.2E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 PRINTS PR00702 Acriflavin resistance protein family signature 17 35 4.2E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 PRINTS PR00702 Acriflavin resistance protein family signature 343 364 4.2E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 PRINTS PR00702 Acriflavin resistance protein family signature 371 395 4.2E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 PRINTS PR00702 Acriflavin resistance protein family signature 601 615 4.2E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 PRINTS PR00702 Acriflavin resistance protein family signature 425 448 4.2E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 PRINTS PR00702 Acriflavin resistance protein family signature 450 473 4.2E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 PRINTS PR00702 Acriflavin resistance protein family signature 316 339 4.2E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 SUPERFAMILY SSF82714 163 252 2.35E-24 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMBLS11_00665 262e4680670cb001b6abe27e4cb31fa0 1013 SUPERFAMILY SSF82693 19 113 1.15E-26 T 14-10-2018 AMBLS11_11290 93bf4238a9561b852b33def0984fc809 270 SMART SM00342 178 261 3.8E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_11290 93bf4238a9561b852b33def0984fc809 270 Gene3D G3DSA:1.10.10.60 163 266 2.2E-21 T 14-10-2018 AMBLS11_11290 93bf4238a9561b852b33def0984fc809 270 SUPERFAMILY SSF46689 216 264 1.0E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_11290 93bf4238a9561b852b33def0984fc809 270 Pfam PF12833 Helix-turn-helix domain 184 263 2.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_06990 1968bbac72c759526d7370e1f964abed 261 SUPERFAMILY SSF47598 1 33 3.33E-12 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMBLS11_06990 1968bbac72c759526d7370e1f964abed 261 SUPERFAMILY SSF82808 144 254 3.92E-36 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AMBLS11_06990 1968bbac72c759526d7370e1f964abed 261 Gene3D G3DSA:1.20.1380.10 142 255 4.8E-40 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AMBLS11_06990 1968bbac72c759526d7370e1f964abed 261 Gene3D G3DSA:1.10.1220.10 1 38 4.6E-22 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMBLS11_06990 1968bbac72c759526d7370e1f964abed 261 Pfam PF17206 SeqA protein N-terminal domain 1 33 1.2E-20 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AMBLS11_06990 1968bbac72c759526d7370e1f964abed 261 Pfam PF03925 SeqA protein C-terminal domain 150 253 1.9E-34 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AMBLS11_09945 f2372deee21192836db85ec7f2fa608b 237 SUPERFAMILY SSF56104 3 233 1.24E-79 T 14-10-2018 AMBLS11_09945 f2372deee21192836db85ec7f2fa608b 237 Gene3D G3DSA:3.30.200.20 7 232 2.4E-91 T 14-10-2018 AMBLS11_09945 f2372deee21192836db85ec7f2fa608b 237 Pfam PF01259 SAICAR synthetase 7 232 9.2E-65 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_09945 f2372deee21192836db85ec7f2fa608b 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 1.5E-78 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AMBLS11_09945 f2372deee21192836db85ec7f2fa608b 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_09945 f2372deee21192836db85ec7f2fa608b 237 Gene3D G3DSA:3.30.470.20 85 221 2.4E-91 T 14-10-2018 AMBLS11_09945 f2372deee21192836db85ec7f2fa608b 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_09945 f2372deee21192836db85ec7f2fa608b 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 30.923 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMBLS11_08810 8d27ffb4d2d3f14d7f62190a3078b207 582 SMART SM00382 366 553 4.1E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_08810 8d27ffb4d2d3f14d7f62190a3078b207 582 Gene3D G3DSA:3.40.50.300 327 579 2.0E-94 T 14-10-2018 AMBLS11_08810 8d27ffb4d2d3f14d7f62190a3078b207 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 580 1.5E-225 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AMBLS11_08810 8d27ffb4d2d3f14d7f62190a3078b207 582 SUPERFAMILY SSF52540 331 578 5.66E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08810 8d27ffb4d2d3f14d7f62190a3078b207 582 Gene3D G3DSA:1.20.1560.10 1 326 5.9E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_08810 8d27ffb4d2d3f14d7f62190a3078b207 582 SUPERFAMILY SSF90123 8 324 4.32E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_08810 8d27ffb4d2d3f14d7f62190a3078b207 582 Pfam PF00005 ABC transporter 357 507 1.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_08810 8d27ffb4d2d3f14d7f62190a3078b207 582 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_08810 8d27ffb4d2d3f14d7f62190a3078b207 582 Pfam PF00664 ABC transporter transmembrane region 29 288 5.6E-52 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 Pfam PF00271 Helicase conserved C-terminal domain 231 337 5.9E-26 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 SMART SM00487 23 220 6.0E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 Gene3D G3DSA:3.40.50.300 1 212 5.0E-76 T 14-10-2018 AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 Gene3D G3DSA:3.40.50.300 213 384 5.4E-42 T 14-10-2018 AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 SUPERFAMILY SSF52540 74 357 3.92E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 Gene3D G3DSA:3.30.70.330 387 459 7.9E-21 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 Pfam PF03880 DbpA RNA binding domain 389 457 3.8E-22 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 SMART SM00490 256 337 1.4E-26 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_17090 c48097a2c2858859f91a886b95eb6f58 459 Pfam PF00270 DEAD/DEAH box helicase 29 194 1.6E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_04895 02c9aef62993edd827a22cfc41314590 218 Gene3D G3DSA:1.10.150.520 14 88 6.7E-37 T 14-10-2018 AMBLS11_04895 02c9aef62993edd827a22cfc41314590 218 SUPERFAMILY SSF56784 3 216 3.77E-25 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_04895 02c9aef62993edd827a22cfc41314590 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 3 187 1.7E-17 T 14-10-2018 AMBLS11_04895 02c9aef62993edd827a22cfc41314590 218 Gene3D G3DSA:3.40.50.1000 4 213 6.7E-37 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 SUPERFAMILY SSF50104 7 119 2.81E-46 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 8 118 4.0E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 PIRSF PIRSF002191 1 120 5.9E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 Gene3D G3DSA:2.30.30.790 1 120 3.6E-14 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 ProSitePatterns PS01015 Ribosomal protein L19 signature. 91 106 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 Pfam PF01245 Ribosomal protein L19 9 118 5.1E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 7 119 31.362 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 PRINTS PR00061 Ribosomal protein L19 signature 93 118 2.7E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 PRINTS PR00061 Ribosomal protein L19 signature 39 68 2.7E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05975 1df1b85ab9f639beba904f84103f4f7b 120 PRINTS PR00061 Ribosomal protein L19 signature 9 38 2.7E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_11570 1f6ca6ce81a311cf4685634b6f5c5cb0 113 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 1.6E-23 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMBLS11_11570 1f6ca6ce81a311cf4685634b6f5c5cb0 113 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 85 3.4E-15 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMBLS11_11570 1f6ca6ce81a311cf4685634b6f5c5cb0 113 SUPERFAMILY SSF69118 5 108 9.29E-31 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMBLS11_11570 1f6ca6ce81a311cf4685634b6f5c5cb0 113 Gene3D G3DSA:1.20.1290.10 1 113 3.2E-38 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 5 273 9.6E-133 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 PIRSF PIRSF002158 12 274 1.2E-102 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.537 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 SUPERFAMILY SSF50104 127 272 7.22E-63 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 SUPERFAMILY SSF50249 4 125 4.8E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 Gene3D G3DSA:2.40.50.140 1 114 2.9E-49 T 14-10-2018 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 Gene3D G3DSA:2.30.30.30 115 195 2.4E-34 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 SMART SM01382 124 252 4.1E-95 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 Gene3D G3DSA:4.10.950.10 196 274 9.4E-37 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.8E-34 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 4.0E-58 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMBLS11_01735 e5b0cd5bc47a8ba8a2230ea61f386d84 274 SMART SM01383 42 118 2.0E-47 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01105 da3a6bb3510e47e057223e1d110d10f4 328 Pfam PF00589 Phage integrase family 161 318 1.8E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_01105 da3a6bb3510e47e057223e1d110d10f4 328 Gene3D G3DSA:1.10.443.10 159 320 1.4E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_01105 da3a6bb3510e47e057223e1d110d10f4 328 SUPERFAMILY SSF56349 57 318 2.91E-43 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_01105 da3a6bb3510e47e057223e1d110d10f4 328 Gene3D G3DSA:1.10.150.130 53 158 2.7E-14 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_10795 424077da1c9edc20360ab50bb2674b4f 741 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 20 600 8.7E-95 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AMBLS11_10795 424077da1c9edc20360ab50bb2674b4f 741 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 18 724 44.232 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AMBLS11_10795 424077da1c9edc20360ab50bb2674b4f 741 SUPERFAMILY SSF52540 195 707 1.1E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10795 424077da1c9edc20360ab50bb2674b4f 741 Gene3D G3DSA:3.40.50.300 152 387 1.4E-57 T 14-10-2018 AMBLS11_10795 424077da1c9edc20360ab50bb2674b4f 741 Pfam PF13538 UvrD-like helicase C-terminal domain 651 701 1.8E-12 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain AMBLS11_10795 424077da1c9edc20360ab50bb2674b4f 741 Pfam PF13245 AAA domain 200 350 5.5E-28 T 14-10-2018 AMBLS11_10795 424077da1c9edc20360ab50bb2674b4f 741 Gene3D G3DSA:3.40.50.300 439 594 1.8E-7 T 14-10-2018 AMBLS11_10795 424077da1c9edc20360ab50bb2674b4f 741 Gene3D G3DSA:3.40.50.300 607 715 2.2E-22 T 14-10-2018 AMBLS11_17260 048228a52d77c3c1148f7a6eff765970 359 Gene3D G3DSA:3.40.50.1400 179 317 9.0E-97 T 14-10-2018 AMBLS11_17260 048228a52d77c3c1148f7a6eff765970 359 TIGRFAM TIGR00109 hemH: ferrochelatase 14 336 2.4E-103 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMBLS11_17260 048228a52d77c3c1148f7a6eff765970 359 Gene3D G3DSA:3.40.50.1400 18 336 9.0E-97 T 14-10-2018 AMBLS11_17260 048228a52d77c3c1148f7a6eff765970 359 Pfam PF00762 Ferrochelatase 16 335 5.2E-115 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMBLS11_17260 048228a52d77c3c1148f7a6eff765970 359 SUPERFAMILY SSF53800 14 341 1.11E-111 T 14-10-2018 AMBLS11_17260 048228a52d77c3c1148f7a6eff765970 359 Hamap MF_00323 Ferrochelatase [hemH]. 15 336 37.987 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMBLS11_00925 d74f514b4aa0556bc0b9736664daa1c9 351 Gene3D G3DSA:3.30.428.10 46 175 1.7E-53 T 14-10-2018 IPR036265 HIT-like superfamily AMBLS11_00925 d74f514b4aa0556bc0b9736664daa1c9 351 SUPERFAMILY SSF54197 182 344 4.25E-46 T 14-10-2018 IPR036265 HIT-like superfamily AMBLS11_00925 d74f514b4aa0556bc0b9736664daa1c9 351 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 346 5.8E-62 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMBLS11_00925 d74f514b4aa0556bc0b9736664daa1c9 351 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 3 346 1.9E-163 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMBLS11_00925 d74f514b4aa0556bc0b9736664daa1c9 351 SUPERFAMILY SSF54197 5 176 1.29E-68 T 14-10-2018 IPR036265 HIT-like superfamily AMBLS11_00925 d74f514b4aa0556bc0b9736664daa1c9 351 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 176 4.8E-70 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMBLS11_00925 d74f514b4aa0556bc0b9736664daa1c9 351 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMBLS11_00925 d74f514b4aa0556bc0b9736664daa1c9 351 PIRSF PIRSF000808 2 341 1.2E-116 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMBLS11_00925 d74f514b4aa0556bc0b9736664daa1c9 351 Gene3D G3DSA:3.30.428.10 176 350 3.8E-66 T 14-10-2018 IPR036265 HIT-like superfamily AMBLS11_08005 89824b3a5a361ec7fb4f1b3407e5ec7e 318 Gene3D G3DSA:3.40.50.1360 59 316 2.5E-65 T 14-10-2018 AMBLS11_08005 89824b3a5a361ec7fb4f1b3407e5ec7e 318 Pfam PF04198 Putative sugar-binding domain 62 316 1.9E-70 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AMBLS11_08005 89824b3a5a361ec7fb4f1b3407e5ec7e 318 Gene3D G3DSA:1.10.10.10 2 58 9.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_08005 89824b3a5a361ec7fb4f1b3407e5ec7e 318 SUPERFAMILY SSF100950 62 315 2.65E-63 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_17735 07c7bfa947b1475437c7ae758c93a8be 291 SUPERFAMILY SSF53167 21 268 2.01E-37 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMBLS11_17735 07c7bfa947b1475437c7ae758c93a8be 291 Pfam PF01048 Phosphorylase superfamily 7 287 3.8E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMBLS11_03145 5845296de0116c99d9fd27c5b863f8be 438 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 59 377 1.7E-61 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AMBLS11_03145 5845296de0116c99d9fd27c5b863f8be 438 SUPERFAMILY SSF53649 54 418 7.69E-80 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMBLS11_03145 5845296de0116c99d9fd27c5b863f8be 438 Gene3D G3DSA:3.40.720.10 59 425 3.6E-102 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMBLS11_03145 5845296de0116c99d9fd27c5b863f8be 438 Gene3D G3DSA:3.30.1360.180 274 375 3.6E-102 T 14-10-2018 AMBLS11_19010 7e82589da6c9a6d3889a7aa83d267345 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 28.287 T 14-10-2018 IPR007551 Protein of unknown function DUF520 AMBLS11_19010 7e82589da6c9a6d3889a7aa83d267345 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 4.4E-62 T 14-10-2018 IPR007551 Protein of unknown function DUF520 AMBLS11_19010 7e82589da6c9a6d3889a7aa83d267345 160 SUPERFAMILY SSF89963 2 84 3.4E-28 T 14-10-2018 IPR036183 YajQ-like superfamily AMBLS11_19010 7e82589da6c9a6d3889a7aa83d267345 160 Gene3D G3DSA:3.30.70.860 94 160 8.5E-30 T 14-10-2018 IPR035571 UPF0234-like, C-terminal AMBLS11_19010 7e82589da6c9a6d3889a7aa83d267345 160 Gene3D G3DSA:3.30.70.990 9 93 2.5E-25 T 14-10-2018 IPR035570 UPF0234, N-terminal AMBLS11_19010 7e82589da6c9a6d3889a7aa83d267345 160 SUPERFAMILY SSF89963 88 160 1.23E-29 T 14-10-2018 IPR036183 YajQ-like superfamily AMBLS11_01575 311716520839c777476e8bf34073f60d 348 Gene3D G3DSA:3.40.50.2300 1 132 1.8E-26 T 14-10-2018 AMBLS11_01575 311716520839c777476e8bf34073f60d 348 Pfam PF00072 Response regulator receiver domain 5 107 4.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01575 311716520839c777476e8bf34073f60d 348 SUPERFAMILY SSF52738 152 340 1.7E-68 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMBLS11_01575 311716520839c777476e8bf34073f60d 348 SMART SM00448 3 116 1.1E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01575 311716520839c777476e8bf34073f60d 348 SUPERFAMILY SSF52172 2 107 5.41E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_01575 311716520839c777476e8bf34073f60d 348 Pfam PF01339 CheB methylesterase 157 333 3.6E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMBLS11_01575 311716520839c777476e8bf34073f60d 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 340 39.834 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMBLS11_01575 311716520839c777476e8bf34073f60d 348 PIRSF PIRSF000876 1 344 4.3E-131 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMBLS11_01575 311716520839c777476e8bf34073f60d 348 Gene3D G3DSA:3.40.50.180 146 344 2.6E-74 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 721 1.3E-254 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 SMART SM00642 245 640 2.1E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 128 200 1.6E-18 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 SUPERFAMILY SSF51011 621 723 3.6E-27 T 14-10-2018 AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 93 725 41.976 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 Pfam PF00128 Alpha amylase, catalytic domain 273 344 4.2E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 626 722 2.8E-16 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 SUPERFAMILY SSF81296 128 221 3.32E-24 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 Gene3D G3DSA:2.60.40.10 2 216 4.8E-47 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 SUPERFAMILY SSF51445 235 619 3.99E-112 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 SUPERFAMILY SSF81296 13 95 2.45E-8 T 14-10-2018 IPR014756 Immunoglobulin E-set AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 Gene3D G3DSA:2.60.40.1180 621 726 3.2E-31 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 PIRSF PIRSF000463 2 726 3.5E-274 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMBLS11_10995 209fd51b5c3448b7180efa1380dcdfec 727 Gene3D G3DSA:3.20.20.80 219 620 4.9E-165 T 14-10-2018 AMBLS11_02985 2c290961fe512dd916793b59aa676c93 328 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 70 1.3E-14 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_02985 2c290961fe512dd916793b59aa676c93 328 SUPERFAMILY SSF52418 80 322 4.55E-47 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_02985 2c290961fe512dd916793b59aa676c93 328 SUPERFAMILY SSF47648 10 73 3.27E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_02985 2c290961fe512dd916793b59aa676c93 328 Gene3D G3DSA:1.20.970.10 4 73 3.5E-21 T 14-10-2018 AMBLS11_02985 2c290961fe512dd916793b59aa676c93 328 Pfam PF00591 Glycosyl transferase family, a/b domain 105 253 1.3E-5 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_02985 2c290961fe512dd916793b59aa676c93 328 Gene3D G3DSA:3.40.1030.10 74 325 1.3E-46 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMBLS11_02840 b17fdb5c035077854a82d460b5e1522b 277 Gene3D G3DSA:3.60.21.10 41 277 1.3E-43 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMBLS11_02840 b17fdb5c035077854a82d460b5e1522b 277 Pfam PF00149 Calcineurin-like phosphoesterase 3 222 7.0E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMBLS11_02840 b17fdb5c035077854a82d460b5e1522b 277 SUPERFAMILY SSF56300 2 277 5.77E-38 T 14-10-2018 AMBLS11_03460 97d580c3d045a80648c81600ac6b1def 504 Gene3D G3DSA:3.30.300.30 371 475 3.0E-5 T 14-10-2018 AMBLS11_03460 97d580c3d045a80648c81600ac6b1def 504 SUPERFAMILY SSF56801 6 480 2.88E-76 T 14-10-2018 AMBLS11_03460 97d580c3d045a80648c81600ac6b1def 504 Gene3D G3DSA:3.40.50.12780 1 367 5.0E-62 T 14-10-2018 AMBLS11_03460 97d580c3d045a80648c81600ac6b1def 504 Pfam PF00501 AMP-binding enzyme 8 373 5.3E-53 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMBLS11_03460 97d580c3d045a80648c81600ac6b1def 504 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMBLS11_15310 543d1f4a1990f83920ec366c75b065da 225 Pfam PF00072 Response regulator receiver domain 3 114 3.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15310 543d1f4a1990f83920ec366c75b065da 225 Gene3D G3DSA:3.40.50.12740 1 206 3.4E-43 T 14-10-2018 AMBLS11_15310 543d1f4a1990f83920ec366c75b065da 225 SUPERFAMILY SSF52172 1 126 3.27E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_15310 543d1f4a1990f83920ec366c75b065da 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 191 7.8E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15310 543d1f4a1990f83920ec366c75b065da 225 SMART SM00421 144 201 0.003 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15310 543d1f4a1990f83920ec366c75b065da 225 SMART SM00448 1 114 1.5E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15310 543d1f4a1990f83920ec366c75b065da 225 SUPERFAMILY SSF46894 139 192 8.84E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 857 921 2.8E-15 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 904 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 SUPERFAMILY SSF47323 610 872 1.12E-68 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 PRINTS PR00986 Valyl-tRNA synthetase signature 474 492 8.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 8.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 PRINTS PR00986 Valyl-tRNA synthetase signature 227 244 8.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 PRINTS PR00986 Valyl-tRNA synthetase signature 343 356 8.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 PRINTS PR00986 Valyl-tRNA synthetase signature 443 464 8.1E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Gene3D G3DSA:3.40.50.620 3 199 9.0E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Pfam PF08264 Anticodon-binding domain of tRNA 642 797 1.3E-43 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 SUPERFAMILY SSF52374 1 609 3.9E-137 T 14-10-2018 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Gene3D G3DSA:1.10.730.10 547 790 1.3E-70 T 14-10-2018 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 922 16.25 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 SUPERFAMILY SSF46589 857 921 1.15E-15 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Gene3D G3DSA:1.10.287.380 850 922 4.1E-18 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 SUPERFAMILY SSF50677 187 339 2.09E-65 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Gene3D G3DSA:3.90.740.10 235 310 5.0E-9 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Gene3D G3DSA:3.90.740.10 200 234 1.8E-5 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Gene3D G3DSA:3.40.50.620 311 523 5.6E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_14910 06fb7099176aa4deab26916271dcaabd 924 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 13 599 4.1E-217 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_00210 b020249d723cc41508e369b4996655c4 545 SUPERFAMILY SSF53187 32 527 1.81E-66 T 14-10-2018 AMBLS11_00210 b020249d723cc41508e369b4996655c4 545 Pfam PF02225 PA domain 132 205 1.4E-5 T 14-10-2018 IPR003137 PA domain AMBLS11_00210 b020249d723cc41508e369b4996655c4 545 Pfam PF04389 Peptidase family M28 299 518 3.0E-43 T 14-10-2018 IPR007484 Peptidase M28 AMBLS11_00210 b020249d723cc41508e369b4996655c4 545 Gene3D G3DSA:3.40.630.10 243 534 2.8E-52 T 14-10-2018 AMBLS11_00210 b020249d723cc41508e369b4996655c4 545 SUPERFAMILY SSF52025 122 248 1.44E-12 T 14-10-2018 AMBLS11_00210 b020249d723cc41508e369b4996655c4 545 Gene3D G3DSA:3.50.30.30 113 221 3.4E-5 T 14-10-2018 AMBLS11_00210 b020249d723cc41508e369b4996655c4 545 Gene3D G3DSA:3.40.630.10 25 112 2.5E-6 T 14-10-2018 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 583 9.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 602 9.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 9.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 559 9.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 Gene3D G3DSA:1.20.120.160 2 140 3.1E-37 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 Gene3D G3DSA:2.40.50.180 628 691 1.4E-33 T 14-10-2018 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 SUPERFAMILY SSF50341 604 736 5.49E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 Pfam PF01627 Hpt domain 8 103 1.3E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 SUPERFAMILY SSF55874 420 603 1.03E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 SMART SM00387 462 605 1.0E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 Gene3D G3DSA:2.30.30.40 605 732 1.4E-33 T 14-10-2018 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 SUPERFAMILY SSF47226 6 125 3.4E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 358 417 5.0E-14 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 Gene3D G3DSA:1.10.287.560 357 417 9.2E-20 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 SUPERFAMILY SSF47384 358 418 1.33E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 604 1.9E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 Pfam PF01584 CheW-like domain 611 738 7.5E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 SMART SM01231 357 417 2.5E-18 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 SMART SM00073 6 103 3.7E-23 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 SMART SM00260 597 736 8.2E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_05065 b4695b26e7263469de2f3340fc97fc00 745 Gene3D G3DSA:3.30.565.10 418 604 4.3E-56 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16990 bec58e65d725f1699f764100ef45c26d 321 Gene3D G3DSA:3.40.50.1820 6 318 9.9E-74 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_16990 bec58e65d725f1699f764100ef45c26d 321 Pfam PF07859 alpha/beta hydrolase fold 97 295 2.9E-34 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMBLS11_16990 bec58e65d725f1699f764100ef45c26d 321 SUPERFAMILY SSF53474 94 320 5.56E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_00305 a3e85d1bd7f725dfd8544e11bb255825 103 Gene3D G3DSA:3.40.250.10 1 100 5.5E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_00305 a3e85d1bd7f725dfd8544e11bb255825 103 SUPERFAMILY SSF52821 1 98 6.29E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_00305 a3e85d1bd7f725dfd8544e11bb255825 103 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 103 29.644 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 AMBLS11_00305 a3e85d1bd7f725dfd8544e11bb255825 103 SMART SM00450 5 100 4.5E-19 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_00305 a3e85d1bd7f725dfd8544e11bb255825 103 Pfam PF00581 Rhodanese-like domain 16 96 4.3E-15 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 Gene3D G3DSA:2.40.50.140 642 762 1.1E-22 T 14-10-2018 AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 SMART SM00316 639 722 1.4E-15 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 SUPERFAMILY SSF50249 187 640 1.06E-147 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 Pfam PF00773 RNB domain 260 587 3.2E-109 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 Pfam PF08206 Ribonuclease B OB domain 87 141 4.5E-18 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 Pfam PF00575 S1 RNA binding domain 639 719 9.6E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 SUPERFAMILY SSF50249 641 720 5.72E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 Gene3D G3DSA:2.40.50.140 69 148 1.0E-16 T 14-10-2018 AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 721 3.8E-271 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 72 719 8.4E-254 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 SUPERFAMILY SSF50249 67 147 1.38E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 Hamap MF_01895 Ribonuclease R [rnr]. 38 722 55.938 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 SMART SM00955 260 588 6.3E-184 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMBLS11_16450 0bef752d5d4798a0b1ff6f93d8d603cf 805 SMART SM00357 86 145 3.6E-9 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMBLS11_00335 89f95ab7ef6adc649011a045b7e124f5 671 Gene3D G3DSA:1.10.10.160 108 181 2.6E-93 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMBLS11_00335 89f95ab7ef6adc649011a045b7e124f5 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 614 3.9E-68 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMBLS11_00335 89f95ab7ef6adc649011a045b7e124f5 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 39.426 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AMBLS11_00335 89f95ab7ef6adc649011a045b7e124f5 671 Gene3D G3DSA:3.40.50.300 4 266 2.6E-93 T 14-10-2018 AMBLS11_00335 89f95ab7ef6adc649011a045b7e124f5 671 Gene3D G3DSA:3.40.50.300 275 633 2.3E-121 T 14-10-2018 AMBLS11_00335 89f95ab7ef6adc649011a045b7e124f5 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AMBLS11_00335 89f95ab7ef6adc649011a045b7e124f5 671 Gene3D G3DSA:1.10.486.10 377 540 2.3E-121 T 14-10-2018 AMBLS11_00335 89f95ab7ef6adc649011a045b7e124f5 671 SUPERFAMILY SSF52540 1 640 1.27E-158 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00335 89f95ab7ef6adc649011a045b7e124f5 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.5E-73 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMBLS11_14290 a26750326670eade2b752b9056c6e6e4 419 SUPERFAMILY SSF103473 33 404 1.44E-52 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_14290 a26750326670eade2b752b9056c6e6e4 419 Pfam PF07690 Major Facilitator Superfamily 38 369 3.9E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_14290 a26750326670eade2b752b9056c6e6e4 419 Gene3D G3DSA:1.20.1250.20 31 410 1.4E-42 T 14-10-2018 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 11 259 9.6E-88 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 9 261 37.146 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 Gene3D G3DSA:3.40.190.80 157 264 3.7E-22 T 14-10-2018 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 SUPERFAMILY SSF56655 7 270 1.96E-74 T 14-10-2018 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 2.3E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 2.3E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 2.3E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 2.3E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 2.3E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 Gene3D G3DSA:3.30.540.10 5 155 1.4E-45 T 14-10-2018 AMBLS11_18315 68af5fded560640a629de3af56310b74 281 Pfam PF00459 Inositol monophosphatase family 9 252 1.9E-49 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMBLS11_12170 7d8c098b363f1f7b542f61fc1b109d11 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 320 28.619 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AMBLS11_12170 7d8c098b363f1f7b542f61fc1b109d11 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 319 1.8E-111 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AMBLS11_12170 7d8c098b363f1f7b542f61fc1b109d11 321 SUPERFAMILY SSF56042 142 304 3.29E-41 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_12170 7d8c098b363f1f7b542f61fc1b109d11 321 Gene3D G3DSA:3.30.1330.10 1 141 9.2E-46 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMBLS11_12170 7d8c098b363f1f7b542f61fc1b109d11 321 Gene3D G3DSA:3.90.650.10 143 320 2.4E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_12170 7d8c098b363f1f7b542f61fc1b109d11 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 297 1.1E-9 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMBLS11_12170 7d8c098b363f1f7b542f61fc1b109d11 321 PIRSF PIRSF005303 1 320 1.2E-92 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AMBLS11_12170 7d8c098b363f1f7b542f61fc1b109d11 321 SUPERFAMILY SSF55326 3 136 2.62E-34 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMBLS11_12170 7d8c098b363f1f7b542f61fc1b109d11 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 135 1.2E-23 T 14-10-2018 IPR016188 PurM-like, N-terminal domain AMBLS11_01025 bdb15617eb340dca6a3fc93001db9598 1332 Pfam PF13116 Protein of unknown function 503 785 4.5E-72 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 AMBLS11_01025 bdb15617eb340dca6a3fc93001db9598 1332 Pfam PF13502 AsmA-like C-terminal region 1047 1288 7.5E-48 T 14-10-2018 IPR032712 AsmA-like, C-terminal AMBLS11_01025 bdb15617eb340dca6a3fc93001db9598 1332 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 11 1297 2.9E-242 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 AMBLS11_04080 9ffa07de4dd88d065704dda9246ecf05 55 Gene3D G3DSA:1.10.10.60 1 50 1.0E-11 T 14-10-2018 AMBLS11_04080 9ffa07de4dd88d065704dda9246ecf05 55 Pfam PF02954 Bacterial regulatory protein, Fis family 5 45 2.3E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_04080 9ffa07de4dd88d065704dda9246ecf05 55 SUPERFAMILY SSF46689 3 47 1.47E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 PIRSF PIRSF000099 1 429 1.3E-160 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 Gene3D G3DSA:3.40.50.1980 233 348 5.4E-118 T 14-10-2018 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 PRINTS PR00083 Histidinol dehydrogenase signature 319 344 1.3E-96 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 PRINTS PR00083 Histidinol dehydrogenase signature 251 270 1.3E-96 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 PRINTS PR00083 Histidinol dehydrogenase signature 31 55 1.3E-96 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 PRINTS PR00083 Histidinol dehydrogenase signature 360 378 1.3E-96 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 1.3E-96 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 PRINTS PR00083 Histidinol dehydrogenase signature 132 158 1.3E-96 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 1.3E-96 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 1.3E-96 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 SUPERFAMILY SSF53720 2 426 2.55E-86 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 Pfam PF00815 Histidinol dehydrogenase 22 426 1.3E-163 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 426 39.694 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 229 261 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 31 425 1.2E-159 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMBLS11_11840 dfba3c1c6f2731b76f08ecc6810d4989 434 Gene3D G3DSA:3.40.50.1980 28 231 5.4E-118 T 14-10-2018 AMBLS11_00235 3fb7b33b2adb791ec3b14012219ddd32 229 Gene3D G3DSA:2.40.360.10 21 225 6.5E-41 T 14-10-2018 IPR023373 YmcC-like superfamily AMBLS11_00235 3fb7b33b2adb791ec3b14012219ddd32 229 SUPERFAMILY SSF159270 26 218 4.05E-40 T 14-10-2018 IPR023373 YmcC-like superfamily AMBLS11_00235 3fb7b33b2adb791ec3b14012219ddd32 229 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 17 215 4.1E-41 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB AMBLS11_09990 1f77b05362c5b2b31e1fc24067a1880d 200 SUPERFAMILY SSF52218 4 196 1.7E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_09990 1f77b05362c5b2b31e1fc24067a1880d 200 Pfam PF03358 NADPH-dependent FMN reductase 11 136 1.0E-9 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMBLS11_09990 1f77b05362c5b2b31e1fc24067a1880d 200 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AMBLS11_09990 1f77b05362c5b2b31e1fc24067a1880d 200 Gene3D G3DSA:3.40.50.360 2 200 1.2E-57 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_09990 1f77b05362c5b2b31e1fc24067a1880d 200 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 196 2.2E-44 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AMBLS11_03015 e7009df3877c0aeb827a2d8cce93a689 300 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_03015 e7009df3877c0aeb827a2d8cce93a689 300 SUPERFAMILY SSF52540 6 242 6.56E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_03015 e7009df3877c0aeb827a2d8cce93a689 300 SMART SM00382 34 216 2.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_03015 e7009df3877c0aeb827a2d8cce93a689 300 Pfam PF00005 ABC transporter 25 166 6.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_03015 e7009df3877c0aeb827a2d8cce93a689 300 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 2.6E-105 T 14-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 AMBLS11_03015 e7009df3877c0aeb827a2d8cce93a689 300 Gene3D G3DSA:3.40.50.300 3 299 7.8E-64 T 14-10-2018 AMBLS11_02790 c4e7a8be081929e6118d66769b954fc0 465 SMART SM00670 10 148 2.2E-7 T 14-10-2018 IPR002716 PIN domain AMBLS11_02790 c4e7a8be081929e6118d66769b954fc0 465 Pfam PF13638 PIN domain 12 157 9.1E-35 T 14-10-2018 IPR002716 PIN domain AMBLS11_02790 c4e7a8be081929e6118d66769b954fc0 465 Gene3D G3DSA:3.40.50.300 253 463 3.1E-64 T 14-10-2018 AMBLS11_02790 c4e7a8be081929e6118d66769b954fc0 465 SUPERFAMILY SSF88723 10 159 1.31E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily AMBLS11_02790 c4e7a8be081929e6118d66769b954fc0 465 SUPERFAMILY SSF52540 254 444 9.07E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02790 c4e7a8be081929e6118d66769b954fc0 465 Pfam PF02562 PhoH-like protein 255 459 1.7E-53 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 AMBLS11_02790 c4e7a8be081929e6118d66769b954fc0 465 Gene3D G3DSA:3.40.50.1010 6 162 1.6E-27 T 14-10-2018 AMBLS11_18345 f3c8d3a65643b2048ee9e969223ad0d0 344 Gene3D G3DSA:3.40.50.1820 56 332 6.3E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_18345 f3c8d3a65643b2048ee9e969223ad0d0 344 SUPERFAMILY SSF53474 34 310 1.74E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_18345 f3c8d3a65643b2048ee9e969223ad0d0 344 Pfam PF00561 alpha/beta hydrolase fold 70 312 1.3E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_18345 f3c8d3a65643b2048ee9e969223ad0d0 344 PIRSF PIRSF005211 1 339 6.2E-100 T 14-10-2018 IPR012020 AB hydrolase 4 family AMBLS11_18345 f3c8d3a65643b2048ee9e969223ad0d0 344 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 237 278 - T 14-10-2018 IPR000952 AB hydrolase 4, conserved site AMBLS11_14205 142fecb8ad8c32d17773f18a01776c7d 105 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 1.5E-11 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 AMBLS11_14205 142fecb8ad8c32d17773f18a01776c7d 105 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 82 101 - T 14-10-2018 IPR001876 Zinc finger, RanBP2-type AMBLS11_14960 512155d902463140b123b76e22c9fc1d 192 Gene3D G3DSA:2.60.40.10 58 146 6.8E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_14960 512155d902463140b123b76e22c9fc1d 192 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 78 144 3.9E-4 T 14-10-2018 IPR010221 VCBS repeat AMBLS11_11535 537f9099388b8c2c33cff4795bd8f1ff 686 Gene3D G3DSA:3.30.9.10 362 591 1.2E-114 T 14-10-2018 AMBLS11_11535 537f9099388b8c2c33cff4795bd8f1ff 686 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 4 679 24.713 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AMBLS11_11535 537f9099388b8c2c33cff4795bd8f1ff 686 Gene3D G3DSA:3.50.50.60 272 681 1.2E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_11535 537f9099388b8c2c33cff4795bd8f1ff 686 SUPERFAMILY SSF51905 272 682 3.95E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_11535 537f9099388b8c2c33cff4795bd8f1ff 686 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 240 2.7E-42 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 AMBLS11_11535 537f9099388b8c2c33cff4795bd8f1ff 686 Pfam PF01266 FAD dependent oxidoreductase 272 653 5.3E-29 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMBLS11_11535 537f9099388b8c2c33cff4795bd8f1ff 686 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 272 683 4.3E-99 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AMBLS11_11535 537f9099388b8c2c33cff4795bd8f1ff 686 Gene3D G3DSA:3.40.50.150 6 252 2.9E-101 T 14-10-2018 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 Gene3D G3DSA:1.20.1730.10 31 533 2.4E-16 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 SUPERFAMILY SSF52172 1018 1142 9.96E-24 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 Pfam PF00512 His Kinase A (phospho-acceptor) domain 784 849 2.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 SUPERFAMILY SSF55785 606 723 1.67E-5 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 943 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 998 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 979 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 947 957 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 894 998 4.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 SUPERFAMILY SSF55874 839 999 4.45E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 Pfam PF00072 Response regulator receiver domain 1022 1134 1.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 SMART SM00448 1020 1134 6.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 Gene3D G3DSA:1.10.287.130 749 845 2.6E-13 T 14-10-2018 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 SUPERFAMILY SSF47384 770 850 3.53E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 Gene3D G3DSA:3.40.50.2300 1010 1146 1.5E-22 T 14-10-2018 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 Gene3D G3DSA:3.30.450.20 596 737 1.3E-9 T 14-10-2018 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 Pfam PF12860 PAS fold 616 729 3.2E-42 T 14-10-2018 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 SMART SM00388 784 849 5.6E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 Gene3D G3DSA:3.30.565.10 846 998 1.3E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16055 3e56fbf7d6750f0ee4bdef54812be725 1147 SMART SM00387 893 1001 3.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_05705 228c17cce9be05f86df69c94b5dfafaa 285 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 3 248 24.464 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AMBLS11_05705 228c17cce9be05f86df69c94b5dfafaa 285 SMART SM00900 155 246 1.0E-26 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMBLS11_05705 228c17cce9be05f86df69c94b5dfafaa 285 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 169 247 9.5E-33 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AMBLS11_05705 228c17cce9be05f86df69c94b5dfafaa 285 Pfam PF04205 FMN-binding domain 166 243 5.1E-15 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 Gene3D G3DSA:3.30.830.10 33 255 2.9E-65 T 14-10-2018 AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 SUPERFAMILY SSF63411 265 450 2.83E-24 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 Pfam PF00675 Insulinase (Peptidase family M16) 492 615 3.9E-16 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 Pfam PF00675 Insulinase (Peptidase family M16) 49 178 8.4E-16 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 SUPERFAMILY SSF63411 36 244 1.03E-54 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 Pfam PF05193 Peptidase M16 inactive domain 648 824 2.1E-25 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 Pfam PF05193 Peptidase M16 inactive domain 205 376 2.8E-25 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 Gene3D G3DSA:3.30.830.10 261 456 1.1E-29 T 14-10-2018 AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 SUPERFAMILY SSF63411 477 687 1.2E-49 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 Gene3D G3DSA:3.30.830.10 704 900 2.7E-35 T 14-10-2018 AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 Gene3D G3DSA:3.30.830.10 483 693 4.7E-51 T 14-10-2018 AMBLS11_11575 c6ca7dcfb31b27062ad1130486b80426 917 SUPERFAMILY SSF63411 710 902 6.67E-30 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_17340 9f44cf17b1526f97fe63c8496d197b55 277 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 114 145 2.2E-11 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AMBLS11_17340 9f44cf17b1526f97fe63c8496d197b55 277 SUPERFAMILY SSF55811 12 117 7.7E-10 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_17340 9f44cf17b1526f97fe63c8496d197b55 277 SUPERFAMILY SSF55811 101 259 7.31E-40 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_17340 9f44cf17b1526f97fe63c8496d197b55 277 ProSitePatterns PS00893 Nudix box signature. 181 202 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMBLS11_17340 9f44cf17b1526f97fe63c8496d197b55 277 Gene3D G3DSA:3.90.79.20 3 146 1.9E-25 T 14-10-2018 AMBLS11_17340 9f44cf17b1526f97fe63c8496d197b55 277 Gene3D G3DSA:3.90.79.10 147 274 9.1E-41 T 14-10-2018 AMBLS11_17340 9f44cf17b1526f97fe63c8496d197b55 277 Pfam PF00293 NUDIX domain 153 258 1.0E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMBLS11_04010 94096d026ec0fc674560e0bfd1458ec7 180 Pfam PF05981 CreA protein 50 172 4.9E-45 T 14-10-2018 IPR010292 Uncharacterised protein family CreA AMBLS11_04010 94096d026ec0fc674560e0bfd1458ec7 180 PIRSF PIRSF003174 25 180 1.7E-48 T 14-10-2018 IPR010292 Uncharacterised protein family CreA AMBLS11_12945 1496081324a3b4389ec695bf23a7ed26 254 PIRSF PIRSF004808 1 241 1.4E-75 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AMBLS11_12945 1496081324a3b4389ec695bf23a7ed26 254 SUPERFAMILY SSF75217 4 184 1.18E-36 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMBLS11_12945 1496081324a3b4389ec695bf23a7ed26 254 Pfam PF00588 SpoU rRNA Methylase family 5 154 4.3E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMBLS11_12945 1496081324a3b4389ec695bf23a7ed26 254 Gene3D G3DSA:3.40.1280.10 1 164 2.6E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMBLS11_12945 1496081324a3b4389ec695bf23a7ed26 254 Gene3D G3DSA:1.10.8.590 165 245 1.4E-28 T 14-10-2018 AMBLS11_12945 1496081324a3b4389ec695bf23a7ed26 254 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 236 1.9E-85 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AMBLS11_07335 feb64aaef3de71bf51f82a9cbba81297 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 43 484 8.1E-166 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AMBLS11_07335 feb64aaef3de71bf51f82a9cbba81297 484 SUPERFAMILY SSF51735 162 286 1.06E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_07335 feb64aaef3de71bf51f82a9cbba81297 484 Pfam PF02397 Bacterial sugar transferase 294 476 1.4E-64 T 14-10-2018 IPR003362 Bacterial sugar transferase AMBLS11_07335 feb64aaef3de71bf51f82a9cbba81297 484 Gene3D G3DSA:3.40.50.720 159 283 4.4E-17 T 14-10-2018 AMBLS11_07335 feb64aaef3de71bf51f82a9cbba81297 484 Pfam PF13727 CoA-binding domain 81 258 5.7E-41 T 14-10-2018 AMBLS11_07335 feb64aaef3de71bf51f82a9cbba81297 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 41 484 7.6E-150 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMBLS11_01045 a261645ba5f43d892939bb3ab2baba06 185 Pfam PF04751 Protein of unknown function (DUF615) 28 179 9.6E-50 T 14-10-2018 IPR006839 Ribosome-associated, YjgA AMBLS11_01045 a261645ba5f43d892939bb3ab2baba06 185 Gene3D G3DSA:1.10.60.30 114 184 2.3E-23 T 14-10-2018 AMBLS11_01045 a261645ba5f43d892939bb3ab2baba06 185 PIRSF PIRSF016183 12 185 2.8E-58 T 14-10-2018 IPR006839 Ribosome-associated, YjgA AMBLS11_01045 a261645ba5f43d892939bb3ab2baba06 185 SUPERFAMILY SSF158710 38 182 6.54E-45 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily AMBLS11_01045 a261645ba5f43d892939bb3ab2baba06 185 Gene3D G3DSA:1.10.60.30 37 113 8.6E-20 T 14-10-2018 AMBLS11_08465 8518c2b9e61bdcb2c4914f35f507901f 637 Gene3D G3DSA:3.90.1310.10 65 250 3.9E-50 T 14-10-2018 AMBLS11_08465 8518c2b9e61bdcb2c4914f35f507901f 637 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 619 50.673 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMBLS11_08465 8518c2b9e61bdcb2c4914f35f507901f 637 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 612 1.6E-69 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMBLS11_08465 8518c2b9e61bdcb2c4914f35f507901f 637 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 616 9.6E-231 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMBLS11_08465 8518c2b9e61bdcb2c4914f35f507901f 637 SUPERFAMILY SSF56601 255 617 2.82E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMBLS11_08465 8518c2b9e61bdcb2c4914f35f507901f 637 Gene3D G3DSA:3.30.1390.30 86 161 3.9E-50 T 14-10-2018 AMBLS11_08465 8518c2b9e61bdcb2c4914f35f507901f 637 Gene3D G3DSA:3.40.710.10 255 620 6.1E-91 T 14-10-2018 AMBLS11_08465 8518c2b9e61bdcb2c4914f35f507901f 637 SUPERFAMILY SSF56519 58 253 1.07E-51 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AMBLS11_08465 8518c2b9e61bdcb2c4914f35f507901f 637 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 8.0E-45 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 Gene3D G3DSA:3.10.20.30 546 644 3.7E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 449 460 2.0E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 412 431 2.0E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 504 512 2.0E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 352 359 2.0E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 SUPERFAMILY SSF54292 527 643 2.62E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 594 602 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 SUPERFAMILY SSF63380 302 403 9.53E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 Pfam PF00175 Oxidoreductase NAD-binding domain 413 518 2.6E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 568 637 8.7E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 Gene3D G3DSA:2.40.30.10 299 402 1.5E-26 T 14-10-2018 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 Gene3D G3DSA:3.40.50.80 407 541 1.7E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 SUPERFAMILY SSF52343 392 534 6.16E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 Pfam PF00970 Oxidoreductase FAD-binding domain 303 402 5.0E-14 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 PRINTS PR00406 Cytochrome B5 reductase signature 352 359 4.8E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 PRINTS PR00406 Cytochrome B5 reductase signature 412 431 4.8E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 PRINTS PR00406 Cytochrome B5 reductase signature 504 512 4.8E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMBLS11_01315 29a1e4af8be60601d3d6976d51fb046a 644 PRINTS PR00406 Cytochrome B5 reductase signature 389 403 4.8E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMBLS11_14425 337cf7671258fc7a4fb77da7861c0ccf 212 Gene3D G3DSA:3.40.1400.10 1 212 1.9E-89 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMBLS11_14425 337cf7671258fc7a4fb77da7861c0ccf 212 Pfam PF02502 Ribose/Galactose Isomerase 3 124 2.5E-28 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMBLS11_14425 337cf7671258fc7a4fb77da7861c0ccf 212 SUPERFAMILY SSF89623 1 159 3.14E-36 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMBLS11_14425 337cf7671258fc7a4fb77da7861c0ccf 212 Pfam PF12408 Ribose-5-phosphate isomerase 168 210 1.4E-18 T 14-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal AMBLS11_03850 c3dabfd6e689f4659a4726f5377708d0 168 Gene3D G3DSA:3.30.70.260 1 76 2.9E-15 T 14-10-2018 AMBLS11_03850 c3dabfd6e689f4659a4726f5377708d0 168 Gene3D G3DSA:3.30.70.260 81 167 3.0E-19 T 14-10-2018 AMBLS11_03850 c3dabfd6e689f4659a4726f5377708d0 168 SUPERFAMILY SSF55021 82 166 1.72E-11 T 14-10-2018 AMBLS11_03850 c3dabfd6e689f4659a4726f5377708d0 168 SUPERFAMILY SSF55021 3 68 5.83E-10 T 14-10-2018 AMBLS11_03850 c3dabfd6e689f4659a4726f5377708d0 168 PIRSF PIRSF028103 1 168 1.9E-35 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AMBLS11_03850 c3dabfd6e689f4659a4726f5377708d0 168 Pfam PF13740 ACT domain 3 68 1.5E-8 T 14-10-2018 AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 Pfam PF02151 UvrB/uvrC motif 633 666 4.9E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 SMART SM00487 9 425 6.4E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 Gene3D G3DSA:3.40.50.300 264 414 5.1E-52 T 14-10-2018 AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 Pfam PF00271 Helicase conserved C-terminal domain 437 545 9.4E-18 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 SUPERFAMILY SSF52540 5 415 1.78E-139 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 SMART SM00490 460 546 7.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 SUPERFAMILY SSF46600 624 667 3.66E-10 T 14-10-2018 IPR036876 UVR domain superfamily AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 Gene3D G3DSA:4.10.860.10 626 671 4.9E-12 T 14-10-2018 AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 2.4E-20 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 43.91 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 SUPERFAMILY SSF52540 37 581 4.96E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 Gene3D G3DSA:3.40.50.300 415 590 2.2E-50 T 14-10-2018 AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 Gene3D G3DSA:3.40.50.300 1 243 1.6E-77 T 14-10-2018 AMBLS11_05735 cff360b4ff03ff1752bea213efaa4b0a 671 Pfam PF04851 Type III restriction enzyme, res subunit 13 121 4.9E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 Gene3D G3DSA:1.20.200.10 108 445 5.3E-141 T 14-10-2018 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 39.841 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 SUPERFAMILY SSF48557 3 449 4.08E-135 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 Gene3D G3DSA:1.10.275.10 1 107 2.4E-33 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.2E-26 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.2E-26 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.2E-26 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.2E-26 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 5.8E-22 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 Pfam PF00206 Lyase 6 301 3.0E-82 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.5E-67 T 14-10-2018 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.5E-67 T 14-10-2018 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.5E-67 T 14-10-2018 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.5E-67 T 14-10-2018 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.5E-67 T 14-10-2018 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.5E-67 T 14-10-2018 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 Gene3D G3DSA:1.10.40.30 363 433 5.3E-141 T 14-10-2018 AMBLS11_02090 96bed691e3590a48f1a533657a6dfabe 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 452 1.2E-189 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMBLS11_16485 297a26c291fc18815becbc46a5d24aa5 214 SMART SM00671 112 147 1.1E-5 T 14-10-2018 IPR006597 Sel1-like repeat AMBLS11_16485 297a26c291fc18815becbc46a5d24aa5 214 SMART SM00671 148 183 87.0 T 14-10-2018 IPR006597 Sel1-like repeat AMBLS11_16485 297a26c291fc18815becbc46a5d24aa5 214 SMART SM00671 76 111 8.5 T 14-10-2018 IPR006597 Sel1-like repeat AMBLS11_16485 297a26c291fc18815becbc46a5d24aa5 214 Gene3D G3DSA:1.25.40.10 24 214 1.1E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16485 297a26c291fc18815becbc46a5d24aa5 214 SUPERFAMILY SSF81901 73 191 2.09E-19 T 14-10-2018 AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 Pfam PF05099 Tellurite resistance protein TerB 51 176 4.3E-15 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 PRINTS PR00625 DnaJ domain signature 241 256 4.5E-8 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 PRINTS PR00625 DnaJ domain signature 265 285 4.5E-8 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 PRINTS PR00625 DnaJ domain signature 223 241 4.5E-8 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 Gene3D G3DSA:1.10.3680.10 46 194 2.1E-25 T 14-10-2018 IPR029024 TerB-like AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 Pfam PF00226 DnaJ domain 221 282 4.3E-11 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 SMART SM00271 220 285 2.2E-13 T 14-10-2018 IPR001623 DnaJ domain AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 SUPERFAMILY SSF46565 215 282 1.64E-15 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 Gene3D G3DSA:1.10.287.110 195 285 3.3E-15 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 286 37.872 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 AMBLS11_03375 611139cd1f1d63a5f2293995a8f713d6 286 SUPERFAMILY SSF158682 21 233 6.02E-28 T 14-10-2018 IPR029024 TerB-like AMBLS11_04580 111ac685a2c837a91ec7a18d671abdd9 287 Pfam PF01148 Cytidylyltransferase family 3 282 2.4E-60 T 14-10-2018 AMBLS11_04580 111ac685a2c837a91ec7a18d671abdd9 287 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 243 269 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AMBLS11_09610 61e4a08da828bcca4a01ae5c3d7848e4 371 Gene3D G3DSA:3.20.20.450 106 351 1.7E-65 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_09610 61e4a08da828bcca4a01ae5c3d7848e4 371 Pfam PF00563 EAL domain 112 343 1.5E-56 T 14-10-2018 IPR001633 EAL domain AMBLS11_09610 61e4a08da828bcca4a01ae5c3d7848e4 371 SMART SM00052 106 348 9.6E-41 T 14-10-2018 IPR001633 EAL domain AMBLS11_09610 61e4a08da828bcca4a01ae5c3d7848e4 371 SUPERFAMILY SSF141868 112 347 1.23E-65 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 SMART SM00448 769 882 1.3E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 Pfam PF00072 Response regulator receiver domain 771 882 5.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 Gene3D G3DSA:1.10.287.130 357 455 8.7E-27 T 14-10-2018 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 Gene3D G3DSA:3.40.50.2300 766 888 5.1E-42 T 14-10-2018 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 Gene3D G3DSA:1.10.8.500 308 356 2.8E-9 T 14-10-2018 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 560 2.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 618 2.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 574 2.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 599 2.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 SUPERFAMILY SSF158472 308 354 6.28E-5 T 14-10-2018 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 Pfam PF00512 His Kinase A (phospho-acceptor) domain 392 457 2.6E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 SMART SM00387 504 621 7.3E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 SUPERFAMILY SSF47384 377 458 9.61E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 SUPERFAMILY SSF52172 770 887 2.7E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 SUPERFAMILY SSF55874 446 621 1.7E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 Gene3D G3DSA:3.30.565.10 456 624 3.0E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 SMART SM00388 392 457 6.8E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 SMART SM01358 35 278 1.1E-22 T 14-10-2018 IPR032255 Helical bimodular sensor domain AMBLS11_14905 14a3552abfca39b20a925f65f9631e69 888 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 620 8.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_02720 64de934b94be345be38816353f0d1920 268 Pfam PF01925 Sulfite exporter TauE/SafE 12 263 3.8E-48 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMBLS11_15905 f5014f26ab1e28a82206817509fdada8 1194 SUPERFAMILY SSF69318 771 1100 4.71E-13 T 14-10-2018 AMBLS11_15905 f5014f26ab1e28a82206817509fdada8 1194 SUPERFAMILY SSF69318 532 767 1.41E-23 T 14-10-2018 AMBLS11_00745 beb593865088f29257928c814990ed64 445 SUPERFAMILY SSF158791 19 131 1.96E-16 T 14-10-2018 AMBLS11_00745 beb593865088f29257928c814990ed64 445 Pfam PF03448 MgtE intracellular N domain 34 132 4.8E-18 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMBLS11_00745 beb593865088f29257928c814990ed64 445 Gene3D G3DSA:3.10.580.10 130 255 1.6E-34 T 14-10-2018 AMBLS11_00745 beb593865088f29257928c814990ed64 445 SUPERFAMILY SSF161093 273 444 6.41E-49 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AMBLS11_00745 beb593865088f29257928c814990ed64 445 SMART SM00924 31 134 6.2E-19 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMBLS11_00745 beb593865088f29257928c814990ed64 445 SUPERFAMILY SSF54631 134 270 3.66E-12 T 14-10-2018 AMBLS11_00745 beb593865088f29257928c814990ed64 445 Gene3D G3DSA:1.25.60.10 3 129 9.1E-8 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily AMBLS11_00745 beb593865088f29257928c814990ed64 445 Pfam PF01769 Divalent cation transporter 316 437 1.1E-25 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMBLS11_00745 beb593865088f29257928c814990ed64 445 Gene3D G3DSA:1.10.357.20 271 444 5.0E-48 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AMBLS11_05075 882f21637f8ce12fabaf164e2361eac0 254 Pfam PF13614 AAA domain 1 180 6.4E-49 T 14-10-2018 IPR025669 AAA domain AMBLS11_05075 882f21637f8ce12fabaf164e2361eac0 254 Gene3D G3DSA:3.40.50.300 1 254 1.4E-67 T 14-10-2018 AMBLS11_05075 882f21637f8ce12fabaf164e2361eac0 254 SUPERFAMILY SSF52540 1 253 1.44E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 Gene3D G3DSA:2.40.50.180 40 159 1.1E-25 T 14-10-2018 AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 Pfam PF01584 CheW-like domain 22 161 5.3E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 SMART SM00448 185 306 5.3E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 PIRSF PIRSF002867 2 313 7.4E-101 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 Gene3D G3DSA:3.40.50.2300 183 319 1.4E-22 T 14-10-2018 AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 Pfam PF00072 Response regulator receiver domain 187 303 7.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 SUPERFAMILY SSF52172 184 313 5.27E-22 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 SUPERFAMILY SSF50341 17 162 2.75E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 Gene3D G3DSA:2.30.30.40 24 153 1.1E-25 T 14-10-2018 AMBLS11_13050 7bbd8a09c4bc55f74557a0ff9d5cf6fd 319 SMART SM00260 18 159 1.3E-18 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_03030 08c20888bc4166df0c8a345bef9c0c33 210 SUPERFAMILY SSF52833 27 203 4.61E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_03030 08c20888bc4166df0c8a345bef9c0c33 210 PIRSF PIRSF001488 1 210 9.7E-51 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AMBLS11_03030 08c20888bc4166df0c8a345bef9c0c33 210 Gene3D G3DSA:3.40.30.10 23 209 6.9E-48 T 14-10-2018 AMBLS11_03030 08c20888bc4166df0c8a345bef9c0c33 210 ProSitePatterns PS00194 Thioredoxin family active site. 46 64 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMBLS11_03030 08c20888bc4166df0c8a345bef9c0c33 210 Pfam PF01323 DSBA-like thioredoxin domain 46 186 1.2E-18 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 Gene3D G3DSA:3.40.50.2300 4 138 4.7E-18 T 14-10-2018 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 SUPERFAMILY SSF48452 168 484 5.69E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 Gene3D G3DSA:1.25.40.10 326 536 2.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 Gene3D G3DSA:1.25.40.10 139 321 7.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 SMART SM00028 168 201 78.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 SMART SM00028 235 268 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 SMART SM00028 448 481 0.41 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 SMART SM00028 390 423 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 SUPERFAMILY SSF52172 8 142 3.27E-18 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 Pfam PF00072 Response regulator receiver domain 12 125 4.0E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_06425 19ab5284bc802139b6f952451c62322d 540 SMART SM00448 9 125 1.2E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14865 456ed6b56bc9ae98f7332aae84858813 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 178 5.3E-38 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AMBLS11_14865 456ed6b56bc9ae98f7332aae84858813 241 Pfam PF01553 Acyltransferase 63 178 1.3E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_14865 456ed6b56bc9ae98f7332aae84858813 241 SUPERFAMILY SSF69593 11 233 8.89E-41 T 14-10-2018 AMBLS11_14865 456ed6b56bc9ae98f7332aae84858813 241 SMART SM00563 67 182 4.0E-33 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_11640 23b2f958ed4d8d6abdb15d9e5b26a86d 479 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 5 264 4.3E-31 T 14-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AMBLS11_11640 23b2f958ed4d8d6abdb15d9e5b26a86d 479 Pfam PF06974 Protein of unknown function (DUF1298) 305 450 5.4E-24 T 14-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AMBLS11_04140 d658789027f4d5727ad3a5655c6b2da0 253 Gene3D G3DSA:2.40.50.40 149 218 1.9E-9 T 14-10-2018 AMBLS11_04140 d658789027f4d5727ad3a5655c6b2da0 253 Pfam PF04397 LytTr DNA-binding domain 162 249 2.1E-15 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_04140 d658789027f4d5727ad3a5655c6b2da0 253 SMART SM00850 158 251 2.2E-11 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_15855 faecd06ede0842a2ea4409f04918a349 244 SMART SM00530 10 64 0.0037 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_15855 faecd06ede0842a2ea4409f04918a349 244 SUPERFAMILY SSF47413 9 69 1.65E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_15855 faecd06ede0842a2ea4409f04918a349 244 Gene3D G3DSA:1.10.260.40 3 79 1.8E-7 T 14-10-2018 AMBLS11_15855 faecd06ede0842a2ea4409f04918a349 244 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 68 8.4E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_18215 81262202c201afec9e222e2a62098ca9 299 Gene3D G3DSA:3.90.1280.10 233 290 4.4E-19 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMBLS11_18215 81262202c201afec9e222e2a62098ca9 299 SUPERFAMILY SSF118352 233 289 1.57E-16 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMBLS11_18215 81262202c201afec9e222e2a62098ca9 299 PIRSF PIRSF005261 1 290 3.4E-69 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMBLS11_18215 81262202c201afec9e222e2a62098ca9 299 Gene3D G3DSA:1.10.287.480 185 232 1.1E-18 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AMBLS11_18215 81262202c201afec9e222e2a62098ca9 299 Pfam PF01430 Hsp33 protein 5 280 1.1E-76 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMBLS11_18215 81262202c201afec9e222e2a62098ca9 299 SUPERFAMILY SSF64397 5 239 8.89E-62 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMBLS11_18215 81262202c201afec9e222e2a62098ca9 299 Gene3D G3DSA:3.55.30.10 1 178 7.3E-55 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMBLS11_02180 02e9b2682e23c2abc686bc2fb123e9ac 387 SUPERFAMILY SSF51261 148 386 1.1E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_02180 02e9b2682e23c2abc686bc2fb123e9ac 387 Gene3D G3DSA:2.70.70.10 249 387 3.3E-34 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_02180 02e9b2682e23c2abc686bc2fb123e9ac 387 Pfam PF01551 Peptidase family M23 289 382 8.2E-24 T 14-10-2018 IPR016047 Peptidase M23 AMBLS11_04745 6edc2e2306d1765f9948170558443895 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMBLS11_04745 6edc2e2306d1765f9948170558443895 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 1.0E-23 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMBLS11_04745 6edc2e2306d1765f9948170558443895 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 7.5E-40 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMBLS11_04745 6edc2e2306d1765f9948170558443895 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 244 2.1E-28 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMBLS11_04745 6edc2e2306d1765f9948170558443895 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 3.9E-109 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AMBLS11_04745 6edc2e2306d1765f9948170558443895 262 Pfam PF00460 Flagella basal body rod protein 5 35 8.1E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMBLS11_04745 6edc2e2306d1765f9948170558443895 262 SUPERFAMILY SSF117143 93 223 1.31E-31 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 Pfam PF00106 short chain dehydrogenase 8 189 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 161 0.002 T 14-10-2018 AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 SUPERFAMILY SSF51735 2 254 3.5E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 5.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 5.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03450 178b21a9e0c40a702e67b1c504391799 281 Gene3D G3DSA:3.40.50.720 2 258 1.4E-55 T 14-10-2018 AMBLS11_18620 0a1530ec788aaf88eeda4f74bc313cdc 91 Pfam PF11137 Protein of unknown function (DUF2909) 25 84 3.1E-15 T 14-10-2018 IPR021313 Protein of unknown function DUF2909 AMBLS11_00680 bea2331ff14d869891cf730d34cdb8d8 323 SUPERFAMILY SSF52768 8 319 9.59E-92 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily AMBLS11_00680 bea2331ff14d869891cf730d34cdb8d8 323 Gene3D G3DSA:3.40.800.20 1 320 1.3E-106 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_00680 bea2331ff14d869891cf730d34cdb8d8 323 Pfam PF00850 Histone deacetylase domain 20 317 6.5E-79 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_00680 bea2331ff14d869891cf730d34cdb8d8 323 PRINTS PR01270 Histone deacetylase superfamily signature 171 186 3.8E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_00680 bea2331ff14d869891cf730d34cdb8d8 323 PRINTS PR01270 Histone deacetylase superfamily signature 248 258 3.8E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_00680 bea2331ff14d869891cf730d34cdb8d8 323 PRINTS PR01270 Histone deacetylase superfamily signature 137 160 3.8E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_01090 f7a55a30d9d663e6cdce7b14b26221e3 234 SUPERFAMILY SSF53474 6 230 4.15E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_01090 f7a55a30d9d663e6cdce7b14b26221e3 234 Gene3D G3DSA:3.40.50.1820 2 231 5.5E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_01090 f7a55a30d9d663e6cdce7b14b26221e3 234 Pfam PF12697 Alpha/beta hydrolase family 52 226 1.8E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 SUPERFAMILY SSF88697 276 345 1.63E-8 T 14-10-2018 IPR015947 PUA-like superfamily AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 Gene3D G3DSA:3.40.1160.10 2 264 1.9E-77 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 1.8E-38 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 1.8E-38 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 1.8E-38 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 1.8E-38 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 Gene3D G3DSA:2.30.130.10 265 364 1.0E-10 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 258 31.217 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 SUPERFAMILY SSF53633 7 256 6.94E-60 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 Pfam PF00696 Amino acid kinase family 7 234 8.7E-39 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 PIRSF PIRSF000729 2 367 7.4E-100 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMBLS11_08615 7e21bb96017afa75bce2dbd1ce758a98 369 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 353 7.0E-97 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMBLS11_11695 8406e206b4b475d6fed7227b73332dfd 184 Pfam PF13302 Acetyltransferase (GNAT) domain 30 160 1.7E-19 T 14-10-2018 IPR000182 GNAT domain AMBLS11_11695 8406e206b4b475d6fed7227b73332dfd 184 SUPERFAMILY SSF55729 16 172 1.81E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_11695 8406e206b4b475d6fed7227b73332dfd 184 Gene3D G3DSA:3.40.630.30 18 182 7.7E-33 T 14-10-2018 AMBLS11_18530 e643c7581c024b8d58c8b3cbda9a5300 319 Pfam PF12118 SprA-related family 59 242 1.2E-42 T 14-10-2018 IPR021973 SprA-related family AMBLS11_06170 aafbf7c29738a0d27a43d4aa80ab59d8 351 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 67.895 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMBLS11_06170 aafbf7c29738a0d27a43d4aa80ab59d8 351 Gene3D G3DSA:3.40.50.10800 200 295 5.9E-97 T 14-10-2018 AMBLS11_06170 aafbf7c29738a0d27a43d4aa80ab59d8 351 Pfam PF02445 Quinolinate synthetase A protein 32 340 3.2E-104 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMBLS11_06170 aafbf7c29738a0d27a43d4aa80ab59d8 351 Gene3D G3DSA:3.40.50.10800 115 339 5.9E-97 T 14-10-2018 AMBLS11_06170 aafbf7c29738a0d27a43d4aa80ab59d8 351 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 27 342 2.9E-116 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMBLS11_06170 aafbf7c29738a0d27a43d4aa80ab59d8 351 Gene3D G3DSA:3.40.50.10800 31 322 5.9E-97 T 14-10-2018 AMBLS11_06170 aafbf7c29738a0d27a43d4aa80ab59d8 351 SUPERFAMILY SSF142754 28 341 5.23E-109 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMBLS11_05355 b3a734da1976426074a1837b60d432f5 141 SUPERFAMILY SSF54637 3 118 1.33E-23 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_05355 b3a734da1976426074a1837b60d432f5 141 Pfam PF03061 Thioesterase superfamily 19 92 1.5E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMBLS11_05355 b3a734da1976426074a1837b60d432f5 141 Gene3D G3DSA:3.10.129.10 1 128 2.2E-21 T 14-10-2018 AMBLS11_10510 7f1150010863281b91ba4e3a5d41f9cc 245 Pfam PF03746 LamB/YcsF family 2 244 2.7E-86 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AMBLS11_10510 7f1150010863281b91ba4e3a5d41f9cc 245 Gene3D G3DSA:3.20.20.370 1 245 4.8E-89 T 14-10-2018 AMBLS11_10510 7f1150010863281b91ba4e3a5d41f9cc 245 SUPERFAMILY SSF88713 1 245 2.08E-84 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 7.5E-48 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 4.8E-20 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 4.8E-20 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 4.8E-20 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 4.8E-20 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 572 38.798 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 Pfam PF03129 Anticodon binding domain 478 571 1.9E-20 T 14-10-2018 IPR004154 Anticodon-binding AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 Gene3D G3DSA:3.30.930.10 11 468 2.0E-218 T 14-10-2018 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 SUPERFAMILY SSF55681 10 481 1.66E-106 T 14-10-2018 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.1E-229 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 SUPERFAMILY SSF55826 218 383 3.92E-9 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 Gene3D G3DSA:3.90.960.10 240 392 2.0E-218 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 Gene3D G3DSA:3.40.50.800 4 557 2.0E-218 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 Pfam PF04073 Aminoacyl-tRNA editing domain 261 381 1.5E-6 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMBLS11_12765 4295b4abf10fbbc4c2a04c82fd2208a5 572 SUPERFAMILY SSF52954 466 571 3.17E-30 T 14-10-2018 AMBLS11_14605 dcececddbe29db835855663398c79a8f 311 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 40 197 1.7E-28 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMBLS11_14605 dcececddbe29db835855663398c79a8f 311 SUPERFAMILY SSF55846 24 209 1.16E-43 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMBLS11_14605 dcececddbe29db835855663398c79a8f 311 Gene3D G3DSA:2.30.30.40 238 304 1.7E-12 T 14-10-2018 AMBLS11_14605 dcececddbe29db835855663398c79a8f 311 SMART SM00287 242 303 2.1E-4 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type AMBLS11_14605 dcececddbe29db835855663398c79a8f 311 SMART SM00644 29 196 1.2E-19 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMBLS11_14605 dcececddbe29db835855663398c79a8f 311 Pfam PF08239 Bacterial SH3 domain 251 300 5.3E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type AMBLS11_01325 857aec5e643133f89ae49bfc9699eda6 264 Pfam PF02085 Class III cytochrome C family 25 105 4.5E-6 T 14-10-2018 IPR020942 Class III cytochrome C GO:0009055|GO:0020037 AMBLS11_01325 857aec5e643133f89ae49bfc9699eda6 264 SUPERFAMILY SSF48695 14 260 4.58E-22 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily AMBLS11_01325 857aec5e643133f89ae49bfc9699eda6 264 Gene3D G3DSA:3.90.10.10 174 253 2.3E-5 T 14-10-2018 AMBLS11_09410 02fea7e44b583ce8bfb6f89d20a8321a 58 Pfam PF04957 Ribosome modulation factor 1 54 8.3E-31 T 14-10-2018 IPR007040 Ribosome modulation factor AMBLS11_09410 02fea7e44b583ce8bfb6f89d20a8321a 58 Gene3D G3DSA:1.10.10.620 1 56 2.8E-29 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily AMBLS11_09410 02fea7e44b583ce8bfb6f89d20a8321a 58 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 2.0E-18 T 14-10-2018 IPR007040 Ribosome modulation factor AMBLS11_09410 02fea7e44b583ce8bfb6f89d20a8321a 58 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 32.177 T 14-10-2018 IPR007040 Ribosome modulation factor AMBLS11_03040 c078893b53fdf0a5f98c1187ca34f859 327 Gene3D G3DSA:1.10.510.10 58 259 4.3E-125 T 14-10-2018 AMBLS11_03040 c078893b53fdf0a5f98c1187ca34f859 327 SUPERFAMILY SSF56112 4 324 1.24E-85 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_03040 c078893b53fdf0a5f98c1187ca34f859 327 Gene3D G3DSA:3.30.200.70 11 110 4.3E-125 T 14-10-2018 AMBLS11_03040 c078893b53fdf0a5f98c1187ca34f859 327 Hamap MF_01497 Stress response kinase A [srkA]. 2 319 47.811 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AMBLS11_03040 c078893b53fdf0a5f98c1187ca34f859 327 Pfam PF01636 Phosphotransferase enzyme family 34 257 1.1E-39 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMBLS11_03040 c078893b53fdf0a5f98c1187ca34f859 327 Gene3D G3DSA:1.20.1270.170 151 308 4.3E-125 T 14-10-2018 AMBLS11_06605 8f7e2c934cfb3778bd7e82c1764e11ed 169 ProSitePatterns PS00818 Dps protein family signature 1. 43 59 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMBLS11_06605 8f7e2c934cfb3778bd7e82c1764e11ed 169 SUPERFAMILY SSF47240 4 161 5.98E-43 T 14-10-2018 IPR009078 Ferritin-like superfamily AMBLS11_06605 8f7e2c934cfb3778bd7e82c1764e11ed 169 Pfam PF00210 Ferritin-like domain 22 161 9.8E-26 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMBLS11_06605 8f7e2c934cfb3778bd7e82c1764e11ed 169 Gene3D G3DSA:1.20.1260.10 3 169 1.8E-51 T 14-10-2018 IPR012347 Ferritin-like AMBLS11_06605 8f7e2c934cfb3778bd7e82c1764e11ed 169 PIRSF PIRSF005900 1 166 8.7E-50 T 14-10-2018 IPR002177 DNA-binding protein Dps AMBLS11_06605 8f7e2c934cfb3778bd7e82c1764e11ed 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 43 59 5.7E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps AMBLS11_06605 8f7e2c934cfb3778bd7e82c1764e11ed 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 138 156 5.7E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps AMBLS11_06605 8f7e2c934cfb3778bd7e82c1764e11ed 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 67 83 5.7E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps AMBLS11_12535 5692a57eb2cf427cd10e44cbb673f0d1 384 PIRSF PIRSF005427 72 383 3.0E-78 T 14-10-2018 IPR005588 MucB/RseB AMBLS11_12535 5692a57eb2cf427cd10e44cbb673f0d1 384 Pfam PF03888 MucB/RseB N-terminal domain 89 265 2.0E-52 T 14-10-2018 IPR033434 MucB/RseB, N-terminal AMBLS11_12535 5692a57eb2cf427cd10e44cbb673f0d1 384 Pfam PF17188 MucB/RseB C-terminal domain 283 377 6.1E-23 T 14-10-2018 IPR033436 MucB/RseB, C-terminal AMBLS11_12535 5692a57eb2cf427cd10e44cbb673f0d1 384 Gene3D G3DSA:2.50.20.10 88 273 7.5E-50 T 14-10-2018 AMBLS11_12535 5692a57eb2cf427cd10e44cbb673f0d1 384 Gene3D G3DSA:3.30.200.100 284 381 2.0E-23 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 65 1327 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 Gene3D G3DSA:3.40.50.300 50 276 7.1E-76 T 14-10-2018 AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 Pfam PF00271 Helicase conserved C-terminal domain 304 425 2.0E-12 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 Pfam PF04408 Helicase associated domain (HA2) 489 586 3.7E-15 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 SMART SM00382 116 408 1.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 Pfam PF11898 Domain of unknown function (DUF3418) 739 1328 2.4E-200 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 Gene3D G3DSA:1.20.120.1080 471 580 2.1E-14 T 14-10-2018 AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 Gene3D G3DSA:3.40.50.300 277 442 5.2E-58 T 14-10-2018 AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 SMART SM00487 98 283 6.2E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 Pfam PF00270 DEAD/DEAH box helicase 112 257 9.0E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 SMART SM00490 326 426 6.2E-15 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 SMART SM00847 486 587 2.6E-30 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 SUPERFAMILY SSF52540 101 617 2.21E-108 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_07730 70fc3184d4a3356dc518a1dbb0f879c3 1331 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 650 725 6.9E-19 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 AMBLS11_13425 6d86988b3400787d75dbd6c93f2ef1f2 554 Gene3D G3DSA:2.40.110.20 136 290 1.5E-52 T 14-10-2018 AMBLS11_13425 6d86988b3400787d75dbd6c93f2ef1f2 554 SUPERFAMILY SSF47203 295 448 2.09E-40 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_13425 6d86988b3400787d75dbd6c93f2ef1f2 554 Gene3D G3DSA:1.20.140.10 291 447 2.3E-37 T 14-10-2018 AMBLS11_13425 6d86988b3400787d75dbd6c93f2ef1f2 554 SUPERFAMILY SSF56645 70 299 1.16E-31 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_13425 6d86988b3400787d75dbd6c93f2ef1f2 554 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 445 2.3E-29 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_13425 6d86988b3400787d75dbd6c93f2ef1f2 554 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 186 280 8.8E-15 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMBLS11_12505 ab44023961c6ace8a5a3a9aa19371f60 305 Pfam PF03837 RecT family 38 216 7.0E-38 T 14-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 AMBLS11_03520 19ff85976b61bce8bfb31aa47e1de07b 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.2E-45 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMBLS11_03520 19ff85976b61bce8bfb31aa47e1de07b 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.099 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AMBLS11_03520 19ff85976b61bce8bfb31aa47e1de07b 130 SUPERFAMILY SSF54211 5 130 1.29E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_03520 19ff85976b61bce8bfb31aa47e1de07b 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AMBLS11_03520 19ff85976b61bce8bfb31aa47e1de07b 130 Gene3D G3DSA:3.30.230.10 1 130 2.3E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 SUPERFAMILY SSF56235 6 521 1.91E-138 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 Gene3D G3DSA:1.10.246.130 233 337 3.1E-12 T 14-10-2018 AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 Pfam PF01019 Gamma-glutamyltranspeptidase 22 518 8.8E-118 T 14-10-2018 AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 Gene3D G3DSA:3.60.20.40 338 522 2.7E-57 T 14-10-2018 AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 265 3.0E-20 T 14-10-2018 AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 120 139 3.0E-20 T 14-10-2018 AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 337 355 3.0E-20 T 14-10-2018 AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 407 3.0E-20 T 14-10-2018 AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 29 54 3.0E-20 T 14-10-2018 AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 361 379 3.0E-20 T 14-10-2018 AMBLS11_07260 344a8cef451ea2f77db3a3910540a52f 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 217 233 3.0E-20 T 14-10-2018 AMBLS11_16700 8dc229d14660c17b80945319a7117b71 70 Pfam PF01197 Ribosomal protein L31 1 65 5.9E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16700 8dc229d14660c17b80945319a7117b71 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.0E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16700 8dc229d14660c17b80945319a7117b71 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.0E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16700 8dc229d14660c17b80945319a7117b71 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.0E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16700 8dc229d14660c17b80945319a7117b71 70 Gene3D G3DSA:2.30.170.50 1 70 4.3E-35 T 14-10-2018 AMBLS11_16700 8dc229d14660c17b80945319a7117b71 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16700 8dc229d14660c17b80945319a7117b71 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 7.3E-36 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16700 8dc229d14660c17b80945319a7117b71 70 SUPERFAMILY SSF143800 1 67 3.92E-29 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16700 8dc229d14660c17b80945319a7117b71 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.425 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 SUPERFAMILY SSF46689 356 446 2.58E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 SUPERFAMILY SSF52172 4 188 7.12E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 SMART SM00382 163 306 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 5 446 4.8E-211 T 14-10-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 Pfam PF00158 Sigma-54 interaction domain 143 309 4.4E-72 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 SUPERFAMILY SSF52540 143 384 5.33E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 Gene3D G3DSA:3.40.50.300 134 313 5.6E-67 T 14-10-2018 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 Gene3D G3DSA:1.10.8.60 314 381 2.4E-22 T 14-10-2018 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.3E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.3E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 Pfam PF02954 Bacterial regulatory protein, Fis family 405 443 1.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 Pfam PF00072 Response regulator receiver domain 5 114 2.0E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 Gene3D G3DSA:1.10.10.60 395 447 1.4E-11 T 14-10-2018 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 SMART SM00448 3 117 7.0E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14155 497dd9a487e0620425b79c34a556230f 453 Gene3D G3DSA:3.40.50.2300 1 133 2.8E-22 T 14-10-2018 AMBLS11_15270 73e426552343da00a0a13b486a9e09ca 840 Gene3D G3DSA:2.170.130.10 70 196 5.2E-10 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_15270 73e426552343da00a0a13b486a9e09ca 840 Pfam PF07715 TonB-dependent Receptor Plug Domain 82 193 5.0E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_15270 73e426552343da00a0a13b486a9e09ca 840 Pfam PF00593 TonB dependent receptor 333 838 1.2E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_15270 73e426552343da00a0a13b486a9e09ca 840 SUPERFAMILY SSF56935 53 840 1.55E-92 T 14-10-2018 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 Pfam PF00682 HMGL-like 4 273 1.2E-97 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 Gene3D G3DSA:3.30.160.270 394 501 2.6E-12 T 14-10-2018 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 SMART SM00917 369 501 6.4E-36 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 1.0E-233 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 SUPERFAMILY SSF110921 389 499 1.06E-24 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 Gene3D G3DSA:1.10.238.260 280 393 4.3E-33 T 14-10-2018 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 SUPERFAMILY SSF51569 1 291 5.31E-100 T 14-10-2018 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 500 4.6E-32 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 42.464 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMBLS11_04245 5e048d030f3ee9d8652cad8a892a012d 519 Gene3D G3DSA:3.20.20.70 1 277 3.5E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_16275 81ae49ec2e76972d41b30775b898b099 934 Gene3D G3DSA:3.40.50.2000 569 755 1.2E-11 T 14-10-2018 AMBLS11_16275 81ae49ec2e76972d41b30775b898b099 934 SUPERFAMILY SSF53756 583 919 3.45E-47 T 14-10-2018 AMBLS11_16275 81ae49ec2e76972d41b30775b898b099 934 Gene3D G3DSA:3.90.550.10 151 436 7.1E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16275 81ae49ec2e76972d41b30775b898b099 934 Pfam PF13692 Glycosyl transferases group 1 757 887 9.7E-16 T 14-10-2018 AMBLS11_16275 81ae49ec2e76972d41b30775b898b099 934 Pfam PF00535 Glycosyl transferase family 2 215 315 5.2E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_16275 81ae49ec2e76972d41b30775b898b099 934 Gene3D G3DSA:3.40.50.2000 756 908 1.1E-23 T 14-10-2018 AMBLS11_16275 81ae49ec2e76972d41b30775b898b099 934 Pfam PF13439 Glycosyltransferase Family 4 583 743 5.9E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMBLS11_16275 81ae49ec2e76972d41b30775b898b099 934 SUPERFAMILY SSF53448 212 416 1.13E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 SUPERFAMILY SSF52096 6 317 7.65E-102 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 199 208 1.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 155 168 1.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 136 152 1.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 171 184 1.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 90 101 1.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 115 133 1.3E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 1.0E-160 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 318 50.16 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 Gene3D G3DSA:3.90.226.10 2 317 3.2E-116 T 14-10-2018 AMBLS11_04630 4545bc01a6c50ef4a16a650f5c1b50f7 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 150 1.0E-62 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMBLS11_03575 94b5d8f6501798692fef323c0063a9ef 281 Gene3D G3DSA:3.40.50.300 1 163 4.8E-8 T 14-10-2018 AMBLS11_03575 94b5d8f6501798692fef323c0063a9ef 281 Pfam PF03668 P-loop ATPase protein family 2 280 2.9E-106 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 AMBLS11_03575 94b5d8f6501798692fef323c0063a9ef 281 PIRSF PIRSF005052 1 281 4.6E-106 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 AMBLS11_03575 94b5d8f6501798692fef323c0063a9ef 281 SUPERFAMILY SSF52540 2 153 1.06E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_03575 94b5d8f6501798692fef323c0063a9ef 281 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.25 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 AMBLS11_18075 590c50710075f437cccf1897c41cd334 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 2.7E-58 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMBLS11_18075 590c50710075f437cccf1897c41cd334 154 Pfam PF00364 Biotin-requiring enzyme 80 153 3.2E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_18075 590c50710075f437cccf1897c41cd334 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_18075 590c50710075f437cccf1897c41cd334 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.7E-16 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMBLS11_18075 590c50710075f437cccf1897c41cd334 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.7E-16 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMBLS11_18075 590c50710075f437cccf1897c41cd334 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.7E-16 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMBLS11_18075 590c50710075f437cccf1897c41cd334 154 SUPERFAMILY SSF51230 78 154 3.93E-25 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_18075 590c50710075f437cccf1897c41cd334 154 Gene3D G3DSA:2.40.50.100 76 154 3.7E-30 T 14-10-2018 AMBLS11_05750 b2b860670e41c61b1cfef5eb5724972c 224 Pfam PF04055 Radical SAM superfamily 27 130 3.9E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_05750 b2b860670e41c61b1cfef5eb5724972c 224 Pfam PF13394 4Fe-4S single cluster domain 25 129 1.9E-14 T 14-10-2018 AMBLS11_05750 b2b860670e41c61b1cfef5eb5724972c 224 Gene3D G3DSA:3.20.20.70 3 224 1.5E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_05750 b2b860670e41c61b1cfef5eb5724972c 224 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 10 224 9.0E-113 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AMBLS11_05750 b2b860670e41c61b1cfef5eb5724972c 224 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 224 35.712 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AMBLS11_05750 b2b860670e41c61b1cfef5eb5724972c 224 PIRSF PIRSF000370 2 224 4.0E-65 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AMBLS11_05750 b2b860670e41c61b1cfef5eb5724972c 224 SUPERFAMILY SSF102114 27 200 1.83E-7 T 14-10-2018 AMBLS11_13865 11a3f26947887b8aedbbfcd467448920 240 Gene3D G3DSA:3.40.50.10420 38 240 4.0E-52 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMBLS11_13865 11a3f26947887b8aedbbfcd467448920 240 SUPERFAMILY SSF100950 39 238 6.42E-51 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_13865 11a3f26947887b8aedbbfcd467448920 240 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 41 232 1.7E-45 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMBLS11_13865 11a3f26947887b8aedbbfcd467448920 240 PIRSF PIRSF006806 34 235 9.0E-34 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMBLS11_13865 11a3f26947887b8aedbbfcd467448920 240 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 40 232 3.1E-36 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMBLS11_17275 4967ebc737217f97976a1d976e7d027e 293 TIGRFAM TIGR01932 hflC: HflC protein 1 154 4.3E-55 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AMBLS11_17275 4967ebc737217f97976a1d976e7d027e 293 TIGRFAM TIGR01932 hflC: HflC protein 148 288 7.7E-55 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AMBLS11_17275 4967ebc737217f97976a1d976e7d027e 293 Pfam PF01145 SPFH domain / Band 7 family 23 204 3.2E-33 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_17275 4967ebc737217f97976a1d976e7d027e 293 SUPERFAMILY SSF117892 57 193 1.15E-30 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily AMBLS11_17275 4967ebc737217f97976a1d976e7d027e 293 Gene3D G3DSA:3.30.479.30 54 190 9.3E-24 T 14-10-2018 AMBLS11_17275 4967ebc737217f97976a1d976e7d027e 293 SMART SM00244 18 188 2.7E-41 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_17275 4967ebc737217f97976a1d976e7d027e 293 PIRSF PIRSF005651 1 293 9.1E-100 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AMBLS11_14930 d7622845bd25d5af1c65a91edf68954c 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 353 1.0E-69 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AMBLS11_14930 d7622845bd25d5af1c65a91edf68954c 353 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 6.9E-136 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AMBLS11_16845 b60ef0a43ce697065468037c2f135ddd 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.482 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMBLS11_16845 b60ef0a43ce697065468037c2f135ddd 283 Gene3D G3DSA:3.30.1300.10 181 282 1.1E-27 T 14-10-2018 AMBLS11_16845 b60ef0a43ce697065468037c2f135ddd 283 Gene3D G3DSA:3.40.50.620 1 179 3.1E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_16845 b60ef0a43ce697065468037c2f135ddd 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 67 1.8E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMBLS11_16845 b60ef0a43ce697065468037c2f135ddd 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 8.3E-101 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMBLS11_16845 b60ef0a43ce697065468037c2f135ddd 283 Pfam PF02569 Pantoate-beta-alanine ligase 2 278 3.3E-104 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMBLS11_16845 b60ef0a43ce697065468037c2f135ddd 283 SUPERFAMILY SSF52374 1 281 1.21E-105 T 14-10-2018 AMBLS11_06160 e654430d9823db3ee9b7cdefc52d3fc2 264 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 264 19.556 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AMBLS11_06160 e654430d9823db3ee9b7cdefc52d3fc2 264 Pfam PF13432 Tetratricopeptide repeat 155 204 3.3E-6 T 14-10-2018 AMBLS11_06160 e654430d9823db3ee9b7cdefc52d3fc2 264 SUPERFAMILY SSF48452 145 253 4.83E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_06160 e654430d9823db3ee9b7cdefc52d3fc2 264 Gene3D G3DSA:1.25.40.10 144 264 9.4E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_06160 e654430d9823db3ee9b7cdefc52d3fc2 264 Pfam PF13174 Tetratricopeptide repeat 219 251 6.7E-8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_06160 e654430d9823db3ee9b7cdefc52d3fc2 264 Gene3D G3DSA:1.20.5.110 36 111 5.5E-20 T 14-10-2018 AMBLS11_06160 e654430d9823db3ee9b7cdefc52d3fc2 264 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 261 1.3E-41 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal AMBLS11_06160 e654430d9823db3ee9b7cdefc52d3fc2 264 Pfam PF16331 TolA binding protein trimerisation 39 111 2.0E-22 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AMBLS11_01490 c6bb9450caf6b194aec43776214322a4 180 SUPERFAMILY SSF55729 30 154 1.65E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_01490 c6bb9450caf6b194aec43776214322a4 180 Pfam PF13508 Acetyltransferase (GNAT) domain 52 145 2.9E-9 T 14-10-2018 IPR000182 GNAT domain AMBLS11_01490 c6bb9450caf6b194aec43776214322a4 180 Gene3D G3DSA:3.40.630.30 6 155 1.9E-29 T 14-10-2018 AMBLS11_07435 4ce34a505f804d769ce38c4c4f9f2e9b 252 Gene3D G3DSA:3.40.50.300 17 251 1.5E-10 T 14-10-2018 AMBLS11_07435 4ce34a505f804d769ce38c4c4f9f2e9b 252 SUPERFAMILY SSF52540 20 200 6.13E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13430 b9535941672a0b842650407b27e9c439 183 Pfam PF02635 DsrE/DsrF-like family 69 180 2.9E-16 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AMBLS11_13430 b9535941672a0b842650407b27e9c439 183 Gene3D G3DSA:3.40.1260.10 54 181 1.7E-9 T 14-10-2018 IPR027396 DsrEFH-like AMBLS11_13430 b9535941672a0b842650407b27e9c439 183 SUPERFAMILY SSF75169 56 183 1.53E-20 T 14-10-2018 IPR027396 DsrEFH-like AMBLS11_14450 654d9fc99c6a35f6a8de463a861684b9 142 Gene3D G3DSA:3.30.530.20 1 140 1.1E-11 T 14-10-2018 IPR023393 START-like domain superfamily AMBLS11_14450 654d9fc99c6a35f6a8de463a861684b9 142 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 139 1.3E-10 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMBLS11_14450 654d9fc99c6a35f6a8de463a861684b9 142 SUPERFAMILY SSF55961 5 140 9.16E-14 T 14-10-2018 AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 Gene3D G3DSA:3.30.565.10 315 470 7.2E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 208 308 1.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 459 8.3E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 6.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 6.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 6.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 6.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 SUPERFAMILY SSF55874 310 463 9.04E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 SMART SM00387 354 462 2.0E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_07555 f3d65dfc90825b0e72c05dd7792e8569 480 Gene3D G3DSA:1.10.287.130 185 308 1.8E-20 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 41 552 2.9E-127 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 Gene3D G3DSA:3.60.20.40 373 563 7.2E-69 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 Pfam PF01019 Gamma-glutamyltranspeptidase 56 558 1.7E-166 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 Gene3D G3DSA:1.10.246.130 266 372 1.9E-38 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 SUPERFAMILY SSF56235 29 563 3.42E-185 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 298 8.3E-48 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 250 266 8.3E-48 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 428 443 8.3E-48 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 452 469 8.3E-48 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 373 391 8.3E-48 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 8.3E-48 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 397 415 8.3E-48 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 134 152 8.3E-48 T 14-10-2018 AMBLS11_01880 8642fb306ed948ea95a05d9d6e31ae7d 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 152 171 8.3E-48 T 14-10-2018 AMBLS11_13765 75cbfc4205ffdd673462abd2fc739c11 332 Gene3D G3DSA:3.40.50.10490 2 191 1.7E-48 T 14-10-2018 AMBLS11_13765 75cbfc4205ffdd673462abd2fc739c11 332 SUPERFAMILY SSF53697 5 330 1.45E-64 T 14-10-2018 AMBLS11_13765 75cbfc4205ffdd673462abd2fc739c11 332 Pfam PF01380 SIS domain 199 284 8.2E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMBLS11_13765 75cbfc4205ffdd673462abd2fc739c11 332 Pfam PF01380 SIS domain 41 163 6.1E-18 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMBLS11_13765 75cbfc4205ffdd673462abd2fc739c11 332 Gene3D G3DSA:3.40.50.10490 192 317 2.4E-35 T 14-10-2018 AMBLS11_16515 793592a787813354d313a696c7f2771e 464 SUPERFAMILY SSF53187 43 369 2.33E-50 T 14-10-2018 AMBLS11_16515 793592a787813354d313a696c7f2771e 464 Gene3D G3DSA:3.40.630.10 31 367 8.9E-59 T 14-10-2018 AMBLS11_16515 793592a787813354d313a696c7f2771e 464 SUPERFAMILY SSF49265 366 451 4.54E-11 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMBLS11_16515 793592a787813354d313a696c7f2771e 464 Gene3D G3DSA:2.60.40.10 368 455 1.5E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_16515 793592a787813354d313a696c7f2771e 464 Pfam PF04389 Peptidase family M28 123 325 1.0E-20 T 14-10-2018 IPR007484 Peptidase M28 AMBLS11_05175 4c4ef5d93a9e650c86221f4024845781 63 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 62 16.747 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMBLS11_05175 4c4ef5d93a9e650c86221f4024845781 63 SUPERFAMILY SSF117130 1 54 7.72E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AMBLS11_05175 4c4ef5d93a9e650c86221f4024845781 63 Gene3D G3DSA:3.30.70.1680 1 59 1.3E-29 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AMBLS11_05175 4c4ef5d93a9e650c86221f4024845781 63 Pfam PF02599 Global regulator protein family 1 52 3.5E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMBLS11_05175 4c4ef5d93a9e650c86221f4024845781 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-11 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMBLS11_05175 4c4ef5d93a9e650c86221f4024845781 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 2.4E-29 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 222 228 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 27 312 3.2E-127 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 SUPERFAMILY SSF53335 39 284 1.64E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 84 284 1.7E-59 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 Pfam PF05175 Methyltransferase small domain 150 233 1.0E-15 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 20 318 49.961 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 Gene3D G3DSA:1.10.8.10 29 124 1.1E-7 T 14-10-2018 AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 29 319 9.9E-87 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 PIRSF PIRSF037167 12 324 4.2E-134 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AMBLS11_05585 646c1848c5a0980bcba26db2a3ff86e8 324 Gene3D G3DSA:3.40.50.150 127 294 8.2E-47 T 14-10-2018 AMBLS11_09810 1f721790b5a0e86ece7160f26d5686e3 977 SUPERFAMILY SSF56935 42 977 4.76E-75 T 14-10-2018 AMBLS11_09810 1f721790b5a0e86ece7160f26d5686e3 977 Gene3D G3DSA:2.170.130.10 35 179 1.8E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_09810 1f721790b5a0e86ece7160f26d5686e3 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 174 3.9E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_09810 1f721790b5a0e86ece7160f26d5686e3 977 Pfam PF00593 TonB dependent receptor 424 976 4.0E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_04695 682551f885ade08f9b5b1f137945a464 143 Pfam PF05130 FlgN protein 4 133 4.2E-16 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AMBLS11_04695 682551f885ade08f9b5b1f137945a464 143 SUPERFAMILY SSF140566 3 114 2.75E-14 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 AMBLS11_04695 682551f885ade08f9b5b1f137945a464 143 Gene3D G3DSA:1.20.58.300 2 83 3.7E-5 T 14-10-2018 AMBLS11_09980 f6ec60bb29cec892c0c70505af77ca3c 179 SUPERFAMILY SSF52833 49 174 7.65E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_09980 f6ec60bb29cec892c0c70505af77ca3c 179 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMBLS11_09980 f6ec60bb29cec892c0c70505af77ca3c 179 Pfam PF00578 AhpC/TSA family 52 156 2.7E-11 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_09980 f6ec60bb29cec892c0c70505af77ca3c 179 Gene3D G3DSA:3.40.30.10 44 176 1.2E-25 T 14-10-2018 AMBLS11_02445 85dadcce5b05d9c1b06da9dc483504d3 480 Gene3D G3DSA:3.40.50.12170 93 479 9.9E-126 T 14-10-2018 AMBLS11_02445 85dadcce5b05d9c1b06da9dc483504d3 480 Pfam PF07075 Protein of unknown function (DUF1343) 102 476 4.5E-118 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 AMBLS11_12150 122b91a1ef30a4de3507733561e88b69 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 64 3.6E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMBLS11_12150 122b91a1ef30a4de3507733561e88b69 80 Gene3D G3DSA:1.10.287.1040 3 79 4.9E-24 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 AMBLS11_12150 122b91a1ef30a4de3507733561e88b69 80 SUPERFAMILY SSF116842 3 71 5.23E-21 T 14-10-2018 AMBLS11_12150 122b91a1ef30a4de3507733561e88b69 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 15.689 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMBLS11_12150 122b91a1ef30a4de3507733561e88b69 80 PIRSF PIRSF006488 1 80 8.2E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMBLS11_12150 122b91a1ef30a4de3507733561e88b69 80 Pfam PF02609 Exonuclease VII small subunit 10 61 2.3E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMBLS11_12150 122b91a1ef30a4de3507733561e88b69 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 6 49 1.0E-9 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 9 301 39.478 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 10 216 3.4E-79 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 PRINTS PR00151 Porphobilinogen deaminase signature 49 69 1.1E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 PRINTS PR00151 Porphobilinogen deaminase signature 147 164 1.1E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 PRINTS PR00151 Porphobilinogen deaminase signature 128 145 1.1E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 PRINTS PR00151 Porphobilinogen deaminase signature 234 251 1.1E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 PRINTS PR00151 Porphobilinogen deaminase signature 80 99 1.1E-50 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 Gene3D G3DSA:3.40.190.10 107 206 1.5E-84 T 14-10-2018 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 Gene3D G3DSA:3.30.160.40 225 310 1.9E-28 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 235 251 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 231 299 5.0E-20 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 Gene3D G3DSA:3.40.190.10 10 214 1.5E-84 T 14-10-2018 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 10 301 4.0E-114 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 SUPERFAMILY SSF54782 224 311 7.06E-27 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 PIRSF PIRSF001438 1 312 3.0E-122 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMBLS11_00515 5bee448ea0de91335edba39815b6c927 312 SUPERFAMILY SSF53850 8 223 4.61E-86 T 14-10-2018 AMBLS11_18120 086b80e89e6211f49adfb764dba30a76 209 Gene3D G3DSA:2.30.110.10 7 206 5.8E-38 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMBLS11_18120 086b80e89e6211f49adfb764dba30a76 209 SUPERFAMILY SSF50475 22 193 1.23E-25 T 14-10-2018 AMBLS11_18120 086b80e89e6211f49adfb764dba30a76 209 Pfam PF01613 Flavin reductase like domain 33 164 3.1E-12 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMBLS11_09860 c360c21f539a4e55ce24f98f6706d2e2 85 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 85 16.603 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AMBLS11_09860 c360c21f539a4e55ce24f98f6706d2e2 85 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 84 4.6E-18 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AMBLS11_15740 b2f3587ca05a43134fa3bae57e609b3a 369 SUPERFAMILY SSF48208 9 364 5.05E-77 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMBLS11_15740 b2f3587ca05a43134fa3bae57e609b3a 369 Gene3D G3DSA:1.50.10.10 20 369 9.7E-97 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMBLS11_15740 b2f3587ca05a43134fa3bae57e609b3a 369 Pfam PF01270 Glycosyl hydrolases family 8 12 363 3.3E-65 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMBLS11_15740 b2f3587ca05a43134fa3bae57e609b3a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 57 70 3.2E-20 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMBLS11_15740 b2f3587ca05a43134fa3bae57e609b3a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 117 135 3.2E-20 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMBLS11_15740 b2f3587ca05a43134fa3bae57e609b3a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 185 202 3.2E-20 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMBLS11_15740 b2f3587ca05a43134fa3bae57e609b3a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 261 270 3.2E-20 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMBLS11_15740 b2f3587ca05a43134fa3bae57e609b3a 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 351 365 3.2E-20 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMBLS11_08330 8ba88a0b0b8a27b0b9888a690e0c988a 388 Gene3D G3DSA:2.60.120.650 16 215 4.0E-77 T 14-10-2018 AMBLS11_08330 8ba88a0b0b8a27b0b9888a690e0c988a 388 SMART SM00558 94 230 4.2E-9 T 14-10-2018 IPR003347 JmjC domain AMBLS11_08330 8ba88a0b0b8a27b0b9888a690e0c988a 388 Gene3D G3DSA:1.10.10.2510 216 387 6.4E-16 T 14-10-2018 AMBLS11_08330 8ba88a0b0b8a27b0b9888a690e0c988a 388 SUPERFAMILY SSF51197 16 290 2.47E-68 T 14-10-2018 AMBLS11_08330 8ba88a0b0b8a27b0b9888a690e0c988a 388 Pfam PF08007 Cupin superfamily protein 21 284 8.0E-76 T 14-10-2018 IPR003347 JmjC domain AMBLS11_16580 76af2ecba3501421e8ebda9bd6bfa619 237 Pfam PF03352 Methyladenine glycosylase 48 146 4.1E-16 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AMBLS11_16580 76af2ecba3501421e8ebda9bd6bfa619 237 Gene3D G3DSA:1.10.340.30 40 172 3.3E-19 T 14-10-2018 AMBLS11_16580 76af2ecba3501421e8ebda9bd6bfa619 237 SUPERFAMILY SSF48150 46 192 1.57E-38 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMBLS11_02190 747ad14dccba48431654fa4c80f27df3 142 Pfam PF03203 MerC mercury resistance protein 12 120 2.5E-27 T 14-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AMBLS11_16405 d4e3248df10e93ab6ebb54a389989b68 179 Pfam PF00281 Ribosomal protein L5 24 80 1.3E-27 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16405 d4e3248df10e93ab6ebb54a389989b68 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.1E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16405 d4e3248df10e93ab6ebb54a389989b68 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16405 d4e3248df10e93ab6ebb54a389989b68 179 Gene3D G3DSA:3.30.1440.10 1 179 8.5E-81 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16405 d4e3248df10e93ab6ebb54a389989b68 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.689 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16405 d4e3248df10e93ab6ebb54a389989b68 179 PIRSF PIRSF002161 1 179 8.3E-67 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16405 d4e3248df10e93ab6ebb54a389989b68 179 SUPERFAMILY SSF55282 4 179 2.12E-79 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_15630 affe5dfa8cd51f919b493802d477630b 588 Pfam PF00691 OmpA family 480 565 1.8E-10 T 14-10-2018 IPR006665 OmpA-like domain AMBLS11_15630 affe5dfa8cd51f919b493802d477630b 588 Gene3D G3DSA:3.30.1330.60 457 580 4.1E-14 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_15630 affe5dfa8cd51f919b493802d477630b 588 SUPERFAMILY SSF103088 469 566 1.83E-14 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_15630 affe5dfa8cd51f919b493802d477630b 588 PRINTS PR01021 OMPA domain signature 533 549 5.8E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_15630 affe5dfa8cd51f919b493802d477630b 588 PRINTS PR01021 OMPA domain signature 518 533 5.8E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMBLS11_14515 bbf4b93e4bd3c63b151aa6459b8823e6 453 Pfam PF07690 Major Facilitator Superfamily 3 386 2.8E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_14515 bbf4b93e4bd3c63b151aa6459b8823e6 453 Gene3D G3DSA:1.20.1250.20 234 437 3.9E-10 T 14-10-2018 AMBLS11_14515 bbf4b93e4bd3c63b151aa6459b8823e6 453 SUPERFAMILY SSF103473 2 434 1.96E-47 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_14515 bbf4b93e4bd3c63b151aa6459b8823e6 453 Gene3D G3DSA:1.20.1720.10 1 201 1.6E-41 T 14-10-2018 AMBLS11_06435 86bc48f475d2c39455fea70a1c794fa2 301 Gene3D G3DSA:3.40.630.10 1 301 3.6E-113 T 14-10-2018 AMBLS11_06435 86bc48f475d2c39455fea70a1c794fa2 301 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 77 175 5.8E-7 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AMBLS11_06435 86bc48f475d2c39455fea70a1c794fa2 301 SUPERFAMILY SSF53187 36 286 5.95E-34 T 14-10-2018 AMBLS11_04725 e1235921f14740576f5fe6e7acb51e8b 140 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.9E-46 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AMBLS11_04725 e1235921f14740576f5fe6e7acb51e8b 140 Pfam PF00460 Flagella basal body rod protein 7 32 9.6E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMBLS11_04725 e1235921f14740576f5fe6e7acb51e8b 140 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 136 4.6E-11 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMBLS11_04725 e1235921f14740576f5fe6e7acb51e8b 140 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMBLS11_14385 6bb6ee901a9b08c4895eab90207f177a 255 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 40 241 2.0E-118 T 14-10-2018 IPR014063 Arsenate resistance ArsH AMBLS11_14385 6bb6ee901a9b08c4895eab90207f177a 255 Pfam PF03358 NADPH-dependent FMN reductase 49 192 1.3E-28 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMBLS11_14385 6bb6ee901a9b08c4895eab90207f177a 255 Gene3D G3DSA:3.40.50.360 21 255 4.8E-76 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_14385 6bb6ee901a9b08c4895eab90207f177a 255 SUPERFAMILY SSF52218 23 241 3.72E-63 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_13585 5c740c286bd11cbcb61ff80409de3b00 282 Gene3D G3DSA:3.40.30.10 100 279 1.9E-30 T 14-10-2018 AMBLS11_13585 5c740c286bd11cbcb61ff80409de3b00 282 Pfam PF00578 AhpC/TSA family 111 253 1.5E-23 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_13585 5c740c286bd11cbcb61ff80409de3b00 282 SUPERFAMILY SSF52833 106 278 3.1E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 SMART SM00849 12 180 4.4E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 Pfam PF00581 Rhodanese-like domain 364 456 4.1E-9 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 Pfam PF00581 Rhodanese-like domain 268 338 3.3E-7 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 SMART SM00450 257 353 1.2 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 SMART SM00450 365 458 9.8E-13 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 SUPERFAMILY SSF52821 258 340 1.96E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 Gene3D G3DSA:3.60.15.10 1 246 2.6E-63 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 Gene3D G3DSA:3.40.250.10 352 458 5.7E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 SUPERFAMILY SSF52821 362 456 1.57E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 SUPERFAMILY SSF56281 1 224 1.68E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 Pfam PF00753 Metallo-beta-lactamase superfamily 12 180 4.6E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_09455 6d86c34333a0ac53173100c7ad396a8a 458 Gene3D G3DSA:3.40.250.10 257 346 2.0E-14 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_06185 ef935e2bc644631a3c454d340209e8c4 338 SUPERFAMILY SSF51735 1 130 1.62E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_06185 ef935e2bc644631a3c454d340209e8c4 338 Gene3D G3DSA:1.10.1040.10 182 326 1.4E-31 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMBLS11_06185 ef935e2bc644631a3c454d340209e8c4 338 Gene3D G3DSA:3.40.50.720 2 181 3.0E-36 T 14-10-2018 AMBLS11_06185 ef935e2bc644631a3c454d340209e8c4 338 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 157 5.4E-33 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain AMBLS11_06185 ef935e2bc644631a3c454d340209e8c4 338 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 322 2.0E-63 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AMBLS11_06185 ef935e2bc644631a3c454d340209e8c4 338 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 182 319 2.7E-25 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain AMBLS11_06185 ef935e2bc644631a3c454d340209e8c4 338 SUPERFAMILY SSF48179 181 321 5.78E-23 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_04970 495e140a0a78771a6dc1b237d5a1b3af 444 SUPERFAMILY SSF52540 95 364 2.77E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04970 495e140a0a78771a6dc1b237d5a1b3af 444 Gene3D G3DSA:3.40.50.12240 17 440 1.1E-153 T 14-10-2018 AMBLS11_04970 495e140a0a78771a6dc1b237d5a1b3af 444 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 25 436 5.0E-195 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_04970 495e140a0a78771a6dc1b237d5a1b3af 444 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 437 2.1E-173 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_04970 495e140a0a78771a6dc1b237d5a1b3af 444 SMART SM00382 159 342 1.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04970 495e140a0a78771a6dc1b237d5a1b3af 444 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 358 1.7E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_04970 495e140a0a78771a6dc1b237d5a1b3af 444 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_18850 7909d0a9ad7e996b5756fffc8f0b9020 501 SUPERFAMILY SSF51905 14 426 4.44E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_18850 7909d0a9ad7e996b5756fffc8f0b9020 501 Gene3D G3DSA:3.50.50.60 12 501 2.3E-184 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_18850 7909d0a9ad7e996b5756fffc8f0b9020 501 PIRSF PIRSF011396 10 501 9.9E-193 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AMBLS11_18850 7909d0a9ad7e996b5756fffc8f0b9020 501 Pfam PF04820 Tryptophan halogenase 17 467 2.7E-185 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMBLS11_12070 2db62f911c138c32f6c4fc18e892a42e 166 SUPERFAMILY SSF48295 34 115 4.45E-15 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_02235 2db62f911c138c32f6c4fc18e892a42e 166 SUPERFAMILY SSF48295 34 115 4.45E-15 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_17980 2db62f911c138c32f6c4fc18e892a42e 166 SUPERFAMILY SSF48295 34 115 4.45E-15 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_02900 2db62f911c138c32f6c4fc18e892a42e 166 SUPERFAMILY SSF48295 34 115 4.45E-15 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_04220 2db62f911c138c32f6c4fc18e892a42e 166 SUPERFAMILY SSF48295 34 115 4.45E-15 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_07950 2db62f911c138c32f6c4fc18e892a42e 166 SUPERFAMILY SSF48295 34 115 4.45E-15 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_05155 03de9ae98d4f55632341ef9aa27a02ad 691 Gene3D G3DSA:1.10.1380.10 85 475 1.7E-223 T 14-10-2018 AMBLS11_05155 03de9ae98d4f55632341ef9aa27a02ad 691 Gene3D G3DSA:3.40.390.10 55 691 1.7E-223 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMBLS11_05155 03de9ae98d4f55632341ef9aa27a02ad 691 SUPERFAMILY SSF55486 49 691 9.67E-197 T 14-10-2018 AMBLS11_05155 03de9ae98d4f55632341ef9aa27a02ad 691 Pfam PF05649 Peptidase family M13 59 436 6.7E-93 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AMBLS11_05155 03de9ae98d4f55632341ef9aa27a02ad 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 480 492 2.8E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_05155 03de9ae98d4f55632341ef9aa27a02ad 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 498 510 2.8E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_05155 03de9ae98d4f55632341ef9aa27a02ad 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 590 601 2.8E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_05155 03de9ae98d4f55632341ef9aa27a02ad 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 519 535 2.8E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_05155 03de9ae98d4f55632341ef9aa27a02ad 691 Pfam PF01431 Peptidase family M13 488 688 7.5E-66 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 SUPERFAMILY SSF52096 19 203 3.53E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 44.53 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 Gene3D G3DSA:3.90.226.10 6 207 1.2E-84 T 14-10-2018 AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 4.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 4.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 4.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 4.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 4.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 Pfam PF00574 Clp protease 22 201 1.0E-89 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 200 2.5E-107 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 14-10-2018 IPR018215 ClpP, Ser active site AMBLS11_12740 4581907afc8186b82609ff2c1f2f0081 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 14-10-2018 IPR033135 ClpP, histidine active site AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 Gene3D G3DSA:1.10.287.130 136 189 1.7E-14 T 14-10-2018 AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 Gene3D G3DSA:3.30.450.20 4 115 1.8E-20 T 14-10-2018 AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 SUPERFAMILY SSF55874 199 352 2.62E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 SMART SM00388 132 196 1.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 SUPERFAMILY SSF47384 132 188 1.41E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 SMART SM00091 6 74 4.4E-6 T 14-10-2018 IPR000014 PAS domain AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 134 189 4.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 SMART SM00387 235 354 4.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 Gene3D G3DSA:3.30.565.10 195 353 3.9E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 352 7.9E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 SUPERFAMILY SSF55785 9 107 8.72E-12 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_14850 d09315125fd57dc2d8965591d799906d 361 Pfam PF00989 PAS fold 8 106 1.3E-9 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 SMART SM00062 28 247 7.6E-18 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 SUPERFAMILY SSF53850 29 246 1.36E-38 T 14-10-2018 AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 307 466 6.4E-23 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 SUPERFAMILY SSF55073 316 465 3.53E-22 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 Gene3D G3DSA:3.40.190.10 25 243 5.3E-51 T 14-10-2018 AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 Gene3D G3DSA:3.30.70.270 296 464 1.8E-27 T 14-10-2018 AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 SMART SM00267 299 466 3.3E-16 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 Gene3D G3DSA:3.40.190.10 112 206 5.3E-51 T 14-10-2018 AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 459 1.3E-19 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07675 c93c09b6c94362c9ba2014ade351eb32 467 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 244 9.9E-27 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_15170 77966d6851a4b9d49077561801331c5b 471 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 402 463 1.1E-16 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMBLS11_15170 77966d6851a4b9d49077561801331c5b 471 SMART SM01027 254 388 2.9E-45 T 14-10-2018 IPR022712 Beta-Casp domain AMBLS11_15170 77966d6851a4b9d49077561801331c5b 471 Pfam PF10996 Beta-Casp domain 254 388 2.2E-25 T 14-10-2018 IPR022712 Beta-Casp domain AMBLS11_15170 77966d6851a4b9d49077561801331c5b 471 Gene3D G3DSA:3.60.15.10 7 448 1.1E-140 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_15170 77966d6851a4b9d49077561801331c5b 471 Pfam PF16661 Metallo-beta-lactamase superfamily domain 19 198 1.9E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_15170 77966d6851a4b9d49077561801331c5b 471 SMART SM00849 14 238 9.4E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_15170 77966d6851a4b9d49077561801331c5b 471 SUPERFAMILY SSF56281 3 470 8.78E-121 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_15170 77966d6851a4b9d49077561801331c5b 471 Gene3D G3DSA:3.40.50.10890 222 414 1.1E-140 T 14-10-2018 AMBLS11_08870 bb58eee7e9a4a9b9f45105da300fd49b 167 Gene3D G3DSA:3.40.630.30 2 166 3.8E-22 T 14-10-2018 AMBLS11_08870 bb58eee7e9a4a9b9f45105da300fd49b 167 Pfam PF13302 Acetyltransferase (GNAT) domain 52 141 4.7E-11 T 14-10-2018 IPR000182 GNAT domain AMBLS11_08870 bb58eee7e9a4a9b9f45105da300fd49b 167 SUPERFAMILY SSF55729 6 165 8.39E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_05605 bad5e2061de51f23ebd0421581bb8b66 428 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 39.804 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 AMBLS11_05605 bad5e2061de51f23ebd0421581bb8b66 428 Pfam PF04285 Protein of unknown function (DUF444) 3 419 2.8E-182 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 AMBLS11_07345 8bd6649a27ceeb0680a1feb9e71799b9 153 Pfam PF10531 SLBB domain 81 124 2.7E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_07345 8bd6649a27ceeb0680a1feb9e71799b9 153 Gene3D G3DSA:3.10.560.10 2 150 2.5E-19 T 14-10-2018 AMBLS11_07345 8bd6649a27ceeb0680a1feb9e71799b9 153 Gene3D G3DSA:3.30.1950.10 7 78 2.5E-19 T 14-10-2018 AMBLS11_07345 8bd6649a27ceeb0680a1feb9e71799b9 153 Pfam PF02563 Polysaccharide biosynthesis/export protein 2 74 8.3E-18 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 4.5E-42 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.91 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.6E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 Gene3D G3DSA:2.40.50.100 21 85 3.4E-30 T 14-10-2018 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02615 d06e9bfab7dc88e1604623c978d9b335 85 SUPERFAMILY SSF110324 2 82 2.02E-33 T 14-10-2018 AMBLS11_13315 f10ded77f233fa179783046dea0b146e 170 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 8 139 2.1E-51 T 14-10-2018 IPR027565 Cupin fold metalloprotein, WbuC family AMBLS11_13315 f10ded77f233fa179783046dea0b146e 170 SUPERFAMILY SSF51182 33 139 2.44E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_13315 f10ded77f233fa179783046dea0b146e 170 Gene3D G3DSA:2.60.120.10 11 135 2.1E-9 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_04155 8d3fd2e98ee40d666e7896f7a233bc49 331 Pfam PF00072 Response regulator receiver domain 4 114 1.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_04155 8d3fd2e98ee40d666e7896f7a233bc49 331 Gene3D G3DSA:3.40.1550.10 132 325 8.9E-36 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_04155 8d3fd2e98ee40d666e7896f7a233bc49 331 SUPERFAMILY SSF103039 133 325 2.96E-43 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_04155 8d3fd2e98ee40d666e7896f7a233bc49 331 Gene3D G3DSA:3.40.50.2300 1 130 5.0E-29 T 14-10-2018 AMBLS11_04155 8d3fd2e98ee40d666e7896f7a233bc49 331 SMART SM00448 2 114 1.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_04155 8d3fd2e98ee40d666e7896f7a233bc49 331 SUPERFAMILY SSF52172 1 151 8.4E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_04040 b03cb5857488002bb4e01a9038be7a69 309 SUPERFAMILY SSF48452 200 304 1.9E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_04040 b03cb5857488002bb4e01a9038be7a69 309 Gene3D G3DSA:1.25.40.10 197 308 1.1E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_04040 b03cb5857488002bb4e01a9038be7a69 309 Gene3D G3DSA:3.90.70.10 54 196 1.4E-14 T 14-10-2018 AMBLS11_04040 b03cb5857488002bb4e01a9038be7a69 309 Pfam PF13529 Peptidase_C39 like family 48 158 3.3E-8 T 14-10-2018 IPR039564 Peptidase C39-like AMBLS11_02655 37ee0d6a44a76f6d9a0b8dbc0e3f72b6 358 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 79 92 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AMBLS11_02655 37ee0d6a44a76f6d9a0b8dbc0e3f72b6 358 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 15 275 3.5E-60 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_02655 37ee0d6a44a76f6d9a0b8dbc0e3f72b6 358 SUPERFAMILY SSF55120 7 349 3.6E-92 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_02655 37ee0d6a44a76f6d9a0b8dbc0e3f72b6 358 Gene3D G3DSA:3.30.2340.10 179 313 7.5E-113 T 14-10-2018 AMBLS11_02655 37ee0d6a44a76f6d9a0b8dbc0e3f72b6 358 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 199 347 1.1E-21 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_02655 37ee0d6a44a76f6d9a0b8dbc0e3f72b6 358 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 11 173 1.2E-39 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_02655 37ee0d6a44a76f6d9a0b8dbc0e3f72b6 358 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 7 353 26.087 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_02655 37ee0d6a44a76f6d9a0b8dbc0e3f72b6 358 Gene3D G3DSA:3.30.2350.20 19 347 7.5E-113 T 14-10-2018 AMBLS11_06455 c2c172c0bdef686abb2522c289bb7814 324 SUPERFAMILY SSF143422 16 193 2.75E-19 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AMBLS11_06455 c2c172c0bdef686abb2522c289bb7814 324 SMART SM01321 13 188 0.001 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 SUPERFAMILY SSF160246 189 318 1.36E-7 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 Pfam PF01590 GAF domain 47 170 1.5E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 219 321 1.6E-7 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 Gene3D G3DSA:3.40.50.300 466 745 3.6E-103 T 14-10-2018 AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 Gene3D G3DSA:3.30.450.90 329 464 6.0E-42 T 14-10-2018 AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 SMART SM00382 491 616 5.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 Pfam PF00437 Type II/IV secretion system protein 370 630 1.8E-73 T 14-10-2018 IPR001482 Type II/IV secretion system protein AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 Gene3D G3DSA:3.30.450.40 11 178 2.0E-28 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 SUPERFAMILY SSF52540 348 742 1.86E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 558 572 - T 14-10-2018 IPR001482 Type II/IV secretion system protein AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 SMART SM00065 22 184 2.7E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_01710 a7b7734351eb7524cfae22779692171a 748 SUPERFAMILY SSF55781 17 173 1.54E-24 T 14-10-2018 AMBLS11_02650 e8770eb5dc90c6a9519374ea15b4aadf 211 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 8 208 1.6E-67 T 14-10-2018 AMBLS11_02650 e8770eb5dc90c6a9519374ea15b4aadf 211 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 210 8.1E-76 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AMBLS11_02650 e8770eb5dc90c6a9519374ea15b4aadf 211 SUPERFAMILY SSF53335 12 206 6.33E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_02650 e8770eb5dc90c6a9519374ea15b4aadf 211 Gene3D G3DSA:3.40.50.150 2 210 1.9E-72 T 14-10-2018 AMBLS11_02650 e8770eb5dc90c6a9519374ea15b4aadf 211 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 133 148 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AMBLS11_02650 e8770eb5dc90c6a9519374ea15b4aadf 211 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 211 36.405 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AMBLS11_06240 cd918da0272cf7a36ead1bf5b4ad9fbe 360 Gene3D G3DSA:2.40.420.20 40 353 1.1E-58 T 14-10-2018 AMBLS11_06240 cd918da0272cf7a36ead1bf5b4ad9fbe 360 Gene3D G3DSA:1.10.287.470 96 155 1.1E-58 T 14-10-2018 AMBLS11_06240 cd918da0272cf7a36ead1bf5b4ad9fbe 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 354 5.0E-54 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_06240 cd918da0272cf7a36ead1bf5b4ad9fbe 360 Gene3D G3DSA:2.40.50.100 62 194 1.1E-58 T 14-10-2018 AMBLS11_06240 cd918da0272cf7a36ead1bf5b4ad9fbe 360 SUPERFAMILY SSF111369 53 229 1.24E-28 T 14-10-2018 AMBLS11_06240 cd918da0272cf7a36ead1bf5b4ad9fbe 360 Gene3D G3DSA:2.40.30.170 47 273 1.1E-58 T 14-10-2018 AMBLS11_06240 cd918da0272cf7a36ead1bf5b4ad9fbe 360 Pfam PF13437 HlyD family secretion protein 160 263 7.6E-8 T 14-10-2018 AMBLS11_18510 f4089ae106fd2d39bc0470f966199e20 607 Pfam PF13229 Right handed beta helix region 279 432 2.1E-11 T 14-10-2018 IPR039448 Right handed beta helix domain AMBLS11_18510 f4089ae106fd2d39bc0470f966199e20 607 Gene3D G3DSA:2.160.20.10 214 580 1.1E-20 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_18510 f4089ae106fd2d39bc0470f966199e20 607 SUPERFAMILY SSF51126 41 435 2.2E-39 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_18510 f4089ae106fd2d39bc0470f966199e20 607 SMART SM00710 353 386 1300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_18510 f4089ae106fd2d39bc0470f966199e20 607 SMART SM00710 400 421 320.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_18510 f4089ae106fd2d39bc0470f966199e20 607 SMART SM00710 298 320 42.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_18510 f4089ae106fd2d39bc0470f966199e20 607 SMART SM00710 321 346 1000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_18510 f4089ae106fd2d39bc0470f966199e20 607 SMART SM00710 422 457 7300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_18510 f4089ae106fd2d39bc0470f966199e20 607 Gene3D G3DSA:2.160.20.10 33 135 9.1E-17 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_18055 3f22260c7b07d7275ce12b46d2e35351 104 Pfam PF03091 CutA1 divalent ion tolerance protein 5 100 3.6E-34 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AMBLS11_18055 3f22260c7b07d7275ce12b46d2e35351 104 Gene3D G3DSA:3.30.70.120 1 104 6.9E-36 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMBLS11_18055 3f22260c7b07d7275ce12b46d2e35351 104 SUPERFAMILY SSF54913 2 102 6.3E-34 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMBLS11_04500 a217364aa907d4106cd657b17633ffb2 247 Gene3D G3DSA:3.40.630.30 51 245 4.8E-18 T 14-10-2018 AMBLS11_04500 a217364aa907d4106cd657b17633ffb2 247 SUPERFAMILY SSF55729 53 232 2.75E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_04500 a217364aa907d4106cd657b17633ffb2 247 Pfam PF00583 Acetyltransferase (GNAT) family 95 214 4.6E-6 T 14-10-2018 IPR000182 GNAT domain AMBLS11_05275 7aa1da9e7763053c395e7a2171a8e231 93 Pfam PF10719 Late competence development protein ComFB 8 84 1.5E-21 T 14-10-2018 IPR019657 Late competence development protein ComFB AMBLS11_17215 fcacb7a1afb9f64e32d18062917060e9 219 SUPERFAMILY SSF52833 1 80 4.13E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_17215 fcacb7a1afb9f64e32d18062917060e9 219 SUPERFAMILY SSF47616 74 199 8.77E-33 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_17215 fcacb7a1afb9f64e32d18062917060e9 219 Gene3D G3DSA:1.20.1050.10 84 191 6.1E-81 T 14-10-2018 AMBLS11_17215 fcacb7a1afb9f64e32d18062917060e9 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 192 2.0E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMBLS11_17215 fcacb7a1afb9f64e32d18062917060e9 219 Gene3D G3DSA:3.40.30.10 2 201 6.1E-81 T 14-10-2018 AMBLS11_17215 fcacb7a1afb9f64e32d18062917060e9 219 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 5.9E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_06270 14de9de62aecbecf191be6f61e07c55c 371 SMART SM00267 189 360 2.0E-55 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06270 14de9de62aecbecf191be6f61e07c55c 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 356 2.1E-42 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06270 14de9de62aecbecf191be6f61e07c55c 371 SUPERFAMILY SSF55073 205 361 1.65E-46 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_06270 14de9de62aecbecf191be6f61e07c55c 371 Gene3D G3DSA:3.30.70.270 193 362 6.4E-55 T 14-10-2018 AMBLS11_06270 14de9de62aecbecf191be6f61e07c55c 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 197 357 1.2E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05320 443139928ebf2504bf142f5521052b22 253 PIRSF PIRSF028069 4 253 4.7E-90 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AMBLS11_05320 443139928ebf2504bf142f5521052b22 253 Pfam PF11932 Protein of unknown function (DUF3450) 11 250 1.6E-91 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AMBLS11_05100 f9e5bc1df8f273004000c43be3fd0eb5 355 Gene3D G3DSA:3.20.20.330 6 344 2.5E-130 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMBLS11_05100 f9e5bc1df8f273004000c43be3fd0eb5 355 Pfam PF02574 Homocysteine S-methyltransferase 22 330 1.5E-83 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AMBLS11_05100 f9e5bc1df8f273004000c43be3fd0eb5 355 SUPERFAMILY SSF82282 12 354 1.7E-106 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMBLS11_03865 e0ba138ce6f7160ca0f26479d3d42633 268 Pfam PF00005 ABC transporter 37 193 8.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_03865 e0ba138ce6f7160ca0f26479d3d42633 268 Gene3D G3DSA:3.40.50.300 17 265 3.2E-67 T 14-10-2018 AMBLS11_03865 e0ba138ce6f7160ca0f26479d3d42633 268 SMART SM00382 46 240 5.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_03865 e0ba138ce6f7160ca0f26479d3d42633 268 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 22 268 9.0E-117 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AMBLS11_03865 e0ba138ce6f7160ca0f26479d3d42633 268 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_03865 e0ba138ce6f7160ca0f26479d3d42633 268 SUPERFAMILY SSF52540 18 255 2.72E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 299 2.4E-27 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 Pfam PF01634 ATP phosphoribosyltransferase 54 215 2.1E-45 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 Pfam PF08029 HisG, C-terminal domain 224 297 5.0E-23 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 Gene3D G3DSA:3.40.190.10 7 221 1.5E-68 T 14-10-2018 AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 Gene3D G3DSA:3.40.190.10 102 191 1.5E-68 T 14-10-2018 AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 Gene3D G3DSA:3.30.70.120 227 299 5.2E-32 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 SUPERFAMILY SSF53850 6 224 2.54E-65 T 14-10-2018 AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 196 2.2E-54 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 SUPERFAMILY SSF54913 227 299 3.67E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMBLS11_11835 772033f26b0fd0b3a837d9f983ebdbd5 300 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 300 33.926 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 2.0E-213 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 395 2.4E-145 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 Gene3D G3DSA:3.40.640.10 55 300 5.5E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 Gene3D G3DSA:3.90.1150.10 21 388 5.5E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 PIRSF PIRSF000521 164 398 1.0E-33 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 PIRSF PIRSF000521 23 151 4.8E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 SUPERFAMILY SSF53383 12 395 7.34E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 Pfam PF00202 Aminotransferase class-III 16 395 6.6E-124 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_01955 2e736bc4caef8d82a1152e8f25d09cff 402 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 68.931 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMBLS11_07710 a1c8a6643eb9c44f0091721e9e61cabe 901 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 237 4.3E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_07710 a1c8a6643eb9c44f0091721e9e61cabe 901 Gene3D G3DSA:2.40.170.20 267 900 2.8E-53 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_07710 a1c8a6643eb9c44f0091721e9e61cabe 901 SUPERFAMILY SSF56935 115 899 6.23E-103 T 14-10-2018 AMBLS11_07710 a1c8a6643eb9c44f0091721e9e61cabe 901 Gene3D G3DSA:2.60.40.1120 33 108 1.6E-8 T 14-10-2018 AMBLS11_07710 a1c8a6643eb9c44f0091721e9e61cabe 901 SUPERFAMILY SSF49452 27 104 1.18E-10 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMBLS11_07710 a1c8a6643eb9c44f0091721e9e61cabe 901 Pfam PF00593 TonB dependent receptor 408 898 3.8E-42 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_07710 a1c8a6643eb9c44f0091721e9e61cabe 901 Pfam PF13715 CarboxypepD_reg-like domain 34 100 2.4E-10 T 14-10-2018 AMBLS11_07710 a1c8a6643eb9c44f0091721e9e61cabe 901 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 114 899 2.0E-167 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_07710 a1c8a6643eb9c44f0091721e9e61cabe 901 Gene3D G3DSA:2.170.130.10 110 242 6.3E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_11690 5fb43772095715323641604897ec74a4 175 SUPERFAMILY SSF158442 18 165 1.02E-41 T 14-10-2018 IPR023380 DsbB-like superfamily AMBLS11_11690 5fb43772095715323641604897ec74a4 175 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 10 171 19.972 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB AMBLS11_11690 5fb43772095715323641604897ec74a4 175 Gene3D G3DSA:1.20.1550.10 4 174 1.1E-50 T 14-10-2018 IPR023380 DsbB-like superfamily AMBLS11_11690 5fb43772095715323641604897ec74a4 175 Pfam PF02600 Disulfide bond formation protein DsbB 15 163 8.6E-42 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AMBLS11_18520 40c84899bfa2252b955e87fbc75c7b04 518 Gene3D G3DSA:2.60.40.1180 39 513 3.0E-176 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_18520 40c84899bfa2252b955e87fbc75c7b04 518 SMART SM00813 323 509 1.5E-63 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AMBLS11_18520 40c84899bfa2252b955e87fbc75c7b04 518 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 323 509 4.6E-37 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AMBLS11_18520 40c84899bfa2252b955e87fbc75c7b04 518 Gene3D G3DSA:3.20.20.80 40 405 3.0E-176 T 14-10-2018 AMBLS11_18520 40c84899bfa2252b955e87fbc75c7b04 518 SUPERFAMILY SSF51011 391 515 8.27E-21 T 14-10-2018 AMBLS11_18520 40c84899bfa2252b955e87fbc75c7b04 518 SUPERFAMILY SSF51445 40 400 1.71E-91 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_11735 6b54541141ad69ad7482d8ba67e93ea5 217 Pfam PF03843 Outer membrane lipoprotein Slp family 14 165 2.0E-43 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AMBLS11_11735 6b54541141ad69ad7482d8ba67e93ea5 217 PIRSF PIRSF004982 1 183 2.4E-46 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AMBLS11_11735 6b54541141ad69ad7482d8ba67e93ea5 217 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 7 174 3.7E-30 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 SMART SM00487 262 456 7.5E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 Gene3D G3DSA:3.40.50.300 454 627 2.9E-51 T 14-10-2018 AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 Pfam PF00271 Helicase conserved C-terminal domain 476 585 1.4E-16 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 Gene3D G3DSA:2.40.50.140 45 138 6.9E-12 T 14-10-2018 AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 SUPERFAMILY SSF52540 202 450 3.3E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 SUPERFAMILY SSF52540 449 651 7.86E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 SUPERFAMILY SSF50249 6 171 4.71E-41 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 661 1.7E-230 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 Gene3D G3DSA:3.40.50.300 206 447 1.0E-82 T 14-10-2018 AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 SMART SM00490 332 410 1.1 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 SMART SM00490 502 586 1.1E-20 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 Pfam PF17191 RecG wedge domain 9 169 2.7E-22 T 14-10-2018 IPR033454 RecG, wedge domain AMBLS11_00555 c4a4c342da882c3ac6ea2ed2da73ddb1 690 Pfam PF00270 DEAD/DEAH box helicase 270 428 2.2E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_08480 0d485cbe6f2d6c609cf420c9f17e886c 233 Gene3D G3DSA:3.40.50.620 11 232 3.7E-55 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_08480 0d485cbe6f2d6c609cf420c9f17e886c 233 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 15 76 5.5E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMBLS11_08480 0d485cbe6f2d6c609cf420c9f17e886c 233 Pfam PF01467 Cytidylyltransferase-like 16 191 1.8E-27 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMBLS11_08480 0d485cbe6f2d6c609cf420c9f17e886c 233 SUPERFAMILY SSF52374 14 232 3.13E-42 T 14-10-2018 AMBLS11_08480 0d485cbe6f2d6c609cf420c9f17e886c 233 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 12 232 26.106 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMBLS11_08480 0d485cbe6f2d6c609cf420c9f17e886c 233 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 16 231 1.0E-37 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMBLS11_05665 acbec246a002baf707471c0d2a04111e 396 SUPERFAMILY SSF51695 86 393 4.71E-64 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMBLS11_05665 acbec246a002baf707471c0d2a04111e 396 Gene3D G3DSA:3.20.20.190 86 391 2.6E-85 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMBLS11_05665 acbec246a002baf707471c0d2a04111e 396 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 92 386 5.8E-47 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMBLS11_13525 d8026d926009648533f3f0a132e637de 317 PIRSF PIRSF035875 5 305 9.1E-66 T 14-10-2018 IPR017039 Virulence factor BrkB AMBLS11_13525 d8026d926009648533f3f0a132e637de 317 Pfam PF03631 Virulence factor BrkB 33 285 8.9E-60 T 14-10-2018 IPR017039 Virulence factor BrkB AMBLS11_13525 d8026d926009648533f3f0a132e637de 317 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 24 284 2.2E-31 T 14-10-2018 IPR017039 Virulence factor BrkB AMBLS11_06845 2b4ff5e576118973c3346adefa9d909d 333 SUPERFAMILY SSF50891 84 281 6.28E-35 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_06845 2b4ff5e576118973c3346adefa9d909d 333 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 85 273 1.2E-34 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMBLS11_06845 2b4ff5e576118973c3346adefa9d909d 333 Gene3D G3DSA:2.40.100.10 33 280 4.8E-38 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_11140 bb64e91fc517b8d1e3a0a96086f81a24 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 420 5.4E-120 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMBLS11_11140 bb64e91fc517b8d1e3a0a96086f81a24 431 PIRSF PIRSF006066 3 431 1.9E-151 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AMBLS11_11140 bb64e91fc517b8d1e3a0a96086f81a24 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 426 8.4E-131 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AMBLS11_04910 df4b3e0134920067f50950fa6a8c48d2 349 Pfam PF08666 SAF domain 293 347 5.0E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMBLS11_04910 df4b3e0134920067f50950fa6a8c48d2 349 Gene3D G3DSA:3.90.1210.10 281 349 5.2E-19 T 14-10-2018 AMBLS11_04910 df4b3e0134920067f50950fa6a8c48d2 349 SMART SM00858 292 349 2.9E-5 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMBLS11_04910 df4b3e0134920067f50950fa6a8c48d2 349 SUPERFAMILY SSF51269 287 349 2.67E-17 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 AMBLS11_04910 df4b3e0134920067f50950fa6a8c48d2 349 SUPERFAMILY SSF51569 3 304 3.17E-90 T 14-10-2018 AMBLS11_04910 df4b3e0134920067f50950fa6a8c48d2 349 Pfam PF03102 NeuB family 37 277 8.1E-90 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 AMBLS11_04910 df4b3e0134920067f50950fa6a8c48d2 349 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 17 344 8.1E-147 T 14-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 AMBLS11_04910 df4b3e0134920067f50950fa6a8c48d2 349 Gene3D G3DSA:3.20.20.70 3 277 5.1E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 Gene3D G3DSA:3.30.50.30 3 53 1.1E-25 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 SUPERFAMILY SSF57716 14 49 7.27E-12 T 14-10-2018 AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 Pfam PF06689 ClpX C4-type zinc finger 14 51 2.1E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 SMART SM01086 318 413 8.0E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 416 53.611 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 Gene3D G3DSA:3.40.50.300 63 316 8.6E-110 T 14-10-2018 AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 SUPERFAMILY SSF52540 63 404 1.55E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 395 2.2E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 SMART SM00994 13 52 1.8E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 413 1.1E-211 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 311 7.0E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 SMART SM00382 112 273 7.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12735 db90adf23b0ff0d082f3eaf81a6450a5 424 Gene3D G3DSA:1.10.8.60 317 424 2.5E-41 T 14-10-2018 AMBLS11_13505 690766d7bc82d21171ea60e25de2bc05 1084 Gene3D G3DSA:2.130.10.10 473 717 2.8E-33 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_13505 690766d7bc82d21171ea60e25de2bc05 1084 Gene3D G3DSA:2.130.10.10 32 197 2.8E-36 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_13505 690766d7bc82d21171ea60e25de2bc05 1084 Pfam PF15902 Sortilin, neurotensin receptor 3, 129 255 9.0E-11 T 14-10-2018 IPR031778 Sortilin, N-terminal AMBLS11_13505 690766d7bc82d21171ea60e25de2bc05 1084 Pfam PF15902 Sortilin, neurotensin receptor 3, 289 393 3.0E-10 T 14-10-2018 IPR031778 Sortilin, N-terminal AMBLS11_13505 690766d7bc82d21171ea60e25de2bc05 1084 Gene3D G3DSA:2.130.10.10 198 312 7.6E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_13505 690766d7bc82d21171ea60e25de2bc05 1084 Gene3D G3DSA:2.130.10.10 313 439 6.6E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_13505 690766d7bc82d21171ea60e25de2bc05 1084 SUPERFAMILY SSF50939 36 417 3.92E-62 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AMBLS11_13505 690766d7bc82d21171ea60e25de2bc05 1084 SUPERFAMILY SSF50939 452 746 2.55E-40 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 6.4E-19 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 SUPERFAMILY SSF46785 1 60 7.96E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 Gene3D G3DSA:1.10.10.10 2 53 9.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.4E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.4E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.4E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 Gene3D G3DSA:3.30.70.920 54 137 1.1E-23 T 14-10-2018 AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 SUPERFAMILY SSF54909 63 143 3.4E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 SMART SM00344 1 110 2.9E-38 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMBLS11_16550 79883e6847a98b6b0f6055a068108345 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 1.7E-14 T 14-10-2018 AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 Gene3D G3DSA:3.40.50.720 2 246 3.6E-70 T 14-10-2018 AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 Pfam PF00106 short chain dehydrogenase 14 210 2.3E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09005 99c4af6fec469222fc26358c47dbb440 247 SUPERFAMILY SSF51735 11 242 1.35E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 Pfam PF03466 LysR substrate binding domain 91 292 1.8E-40 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 SUPERFAMILY SSF53850 92 322 8.31E-44 T 14-10-2018 AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 Gene3D G3DSA:3.40.190.10 92 303 1.1E-99 T 14-10-2018 AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 4.0E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 Gene3D G3DSA:1.10.10.10 1 86 4.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 Gene3D G3DSA:3.40.190.10 167 267 1.1E-99 T 14-10-2018 AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_09235 462293fabd8af3582184577a1fbdc81a 324 SUPERFAMILY SSF46785 1 86 5.28E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 Gene3D G3DSA:3.55.50.30 161 275 2.5E-41 T 14-10-2018 AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 Gene3D G3DSA:2.60.40.3470 48 160 1.6E-13 T 14-10-2018 AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 341 351 6.0E-19 T 14-10-2018 IPR001775 GspD/PilQ family AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 574 588 6.0E-19 T 14-10-2018 IPR001775 GspD/PilQ family AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 424 448 6.0E-19 T 14-10-2018 IPR001775 GspD/PilQ family AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 551 569 6.0E-19 T 14-10-2018 IPR001775 GspD/PilQ family AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 Gene3D G3DSA:3.30.1370.120 276 338 2.5E-10 T 14-10-2018 IPR038591 NolW-like superfamily AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 532 565 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 178 586 1.7E-153 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 Pfam PF03958 Bacterial type II/III secretion system short domain 278 341 1.2E-13 T 14-10-2018 IPR005644 NolW-like AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 SMART SM00965 203 251 3.0E-8 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AMBLS11_02015 2d287d0914b599476ab3751db7188ec0 590 Pfam PF00263 Bacterial type II and III secretion system protein 428 586 7.6E-47 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMBLS11_02630 9a8bb82f60b208a9510234182f15ea9d 165 PRINTS PR00070 Dihydrofolate reductase signature 10 20 7.9E-16 T 14-10-2018 AMBLS11_02630 9a8bb82f60b208a9510234182f15ea9d 165 PRINTS PR00070 Dihydrofolate reductase signature 24 32 7.9E-16 T 14-10-2018 AMBLS11_02630 9a8bb82f60b208a9510234182f15ea9d 165 PRINTS PR00070 Dihydrofolate reductase signature 37 48 7.9E-16 T 14-10-2018 AMBLS11_02630 9a8bb82f60b208a9510234182f15ea9d 165 PRINTS PR00070 Dihydrofolate reductase signature 95 109 7.9E-16 T 14-10-2018 AMBLS11_02630 9a8bb82f60b208a9510234182f15ea9d 165 SUPERFAMILY SSF53597 1 164 6.81E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMBLS11_02630 9a8bb82f60b208a9510234182f15ea9d 165 Pfam PF00186 Dihydrofolate reductase 1 164 6.3E-60 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AMBLS11_02630 9a8bb82f60b208a9510234182f15ea9d 165 Gene3D G3DSA:3.40.430.10 1 165 7.1E-59 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMBLS11_02630 9a8bb82f60b208a9510234182f15ea9d 165 PIRSF PIRSF000194 1 165 9.2E-62 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 AMBLS11_18895 8ca5c2cb15378db08362d46a27e4d778 399 Gene3D G3DSA:1.10.3210.10 3 319 7.4E-71 T 14-10-2018 AMBLS11_18895 8ca5c2cb15378db08362d46a27e4d778 399 SMART SM00471 152 287 6.2E-10 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_18895 8ca5c2cb15378db08362d46a27e4d778 399 SUPERFAMILY SSF109604 149 317 6.28E-36 T 14-10-2018 AMBLS11_18895 8ca5c2cb15378db08362d46a27e4d778 399 Pfam PF11871 Domain of unknown function (DUF3391) 2 121 3.0E-15 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 AMBLS11_18895 8ca5c2cb15378db08362d46a27e4d778 399 TIGRFAM TIGR00277 HDIG: HDIG domain 156 246 3.2E-9 T 14-10-2018 IPR006675 HDIG domain AMBLS11_18895 8ca5c2cb15378db08362d46a27e4d778 399 Pfam PF01966 HD domain 157 277 2.5E-18 T 14-10-2018 IPR006674 HD domain AMBLS11_10825 212ab3aab0327c899bfedd7c1337ad88 462 SMART SM00849 21 222 3.8E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_10825 212ab3aab0327c899bfedd7c1337ad88 462 Gene3D G3DSA:3.60.15.10 13 457 3.6E-144 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_10825 212ab3aab0327c899bfedd7c1337ad88 462 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 382 430 5.8E-6 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMBLS11_10825 212ab3aab0327c899bfedd7c1337ad88 462 SUPERFAMILY SSF56281 11 441 3.05E-72 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_10825 212ab3aab0327c899bfedd7c1337ad88 462 Gene3D G3DSA:3.40.50.10710 225 374 3.6E-144 T 14-10-2018 AMBLS11_10825 212ab3aab0327c899bfedd7c1337ad88 462 Pfam PF00753 Metallo-beta-lactamase superfamily 26 181 9.3E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_04055 4768e8f5aac341e08dbaca7436c4a039 364 SUPERFAMILY SSF50182 178 243 2.68E-16 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_04055 4768e8f5aac341e08dbaca7436c4a039 364 SUPERFAMILY SSF82689 252 349 1.96E-20 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMBLS11_04055 4768e8f5aac341e08dbaca7436c4a039 364 Pfam PF00924 Mechanosensitive ion channel 136 338 1.3E-45 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_04055 4768e8f5aac341e08dbaca7436c4a039 364 Gene3D G3DSA:3.30.70.100 247 343 5.5E-19 T 14-10-2018 AMBLS11_04055 4768e8f5aac341e08dbaca7436c4a039 364 SUPERFAMILY SSF82861 97 176 6.93E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMBLS11_04055 4768e8f5aac341e08dbaca7436c4a039 364 Gene3D G3DSA:2.30.30.60 193 243 3.7E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_17920 ff94ae59fff9f0becdf06df1dbccac16 298 Gene3D G3DSA:1.10.357.140 16 185 4.5E-17 T 14-10-2018 AMBLS11_17920 ff94ae59fff9f0becdf06df1dbccac16 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 287 17.079 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AMBLS11_17920 ff94ae59fff9f0becdf06df1dbccac16 298 Pfam PF01040 UbiA prenyltransferase family 22 266 3.5E-54 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMBLS11_17920 ff94ae59fff9f0becdf06df1dbccac16 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 285 7.7E-83 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AMBLS11_17920 ff94ae59fff9f0becdf06df1dbccac16 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 59 81 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site AMBLS11_13445 a4a01aa8db5f24ca64949c38ccee9e57 661 Pfam PF01295 Adenylate cyclase, class-I 248 586 5.0E-56 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AMBLS11_13445 a4a01aa8db5f24ca64949c38ccee9e57 661 Pfam PF12633 Adenylate cyclase NT domain 19 219 1.4E-52 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 Pfam PF13181 Tetratricopeptide repeat 105 134 0.064 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 SMART SM00028 103 136 0.046 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 SMART SM00028 141 174 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 SMART SM00028 353 386 380.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 SMART SM00028 389 422 77.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 SUPERFAMILY SSF81901 183 425 3.92E-10 T 14-10-2018 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 Gene3D G3DSA:1.25.40.10 33 172 9.3E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 Gene3D G3DSA:1.25.40.10 315 447 2.0E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 Gene3D G3DSA:1.25.40.10 181 314 1.9E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 SUPERFAMILY SSF48452 101 205 5.69E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_03260 8aa9c3b8b86d59ff86ad15203fd6b6ac 449 Pfam PF13432 Tetratricopeptide repeat 358 416 8.4E-4 T 14-10-2018 AMBLS11_03360 8faa1416a54a25b7f4cbce05d73ac5e2 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 327 35.14 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 AMBLS11_03360 8faa1416a54a25b7f4cbce05d73ac5e2 328 SUPERFAMILY SSF53659 5 326 3.05E-111 T 14-10-2018 AMBLS11_03360 8faa1416a54a25b7f4cbce05d73ac5e2 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 319 7.1E-106 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AMBLS11_03360 8faa1416a54a25b7f4cbce05d73ac5e2 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 3.2E-125 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AMBLS11_03360 8faa1416a54a25b7f4cbce05d73ac5e2 328 Gene3D G3DSA:3.40.718.10 1 328 7.6E-125 T 14-10-2018 AMBLS11_09715 4568757c8a6a1050edcc44ccf9edbf67 243 PIRSF PIRSF006232 1 237 8.5E-52 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AMBLS11_09715 4568757c8a6a1050edcc44ccf9edbf67 243 Gene3D G3DSA:2.60.120.10 7 242 9.6E-84 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_09715 4568757c8a6a1050edcc44ccf9edbf67 243 SUPERFAMILY SSF51182 1 241 9.9E-66 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_09715 4568757c8a6a1050edcc44ccf9edbf67 243 Pfam PF02678 Pirin 9 119 4.7E-34 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AMBLS11_09715 4568757c8a6a1050edcc44ccf9edbf67 243 Gene3D G3DSA:2.60.120.10 11 135 9.6E-84 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_08440 a5210f6a3baccfed2d4e7e7c13f2db2b 223 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 34 188 6.3E-69 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMBLS11_08440 a5210f6a3baccfed2d4e7e7c13f2db2b 223 PIRSF PIRSF016262 9 223 6.2E-58 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMBLS11_08440 a5210f6a3baccfed2d4e7e7c13f2db2b 223 Pfam PF03099 Biotin/lipoate A/B protein ligase family 69 166 1.7E-5 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMBLS11_08440 a5210f6a3baccfed2d4e7e7c13f2db2b 223 SUPERFAMILY SSF55681 11 212 1.49E-66 T 14-10-2018 AMBLS11_08440 a5210f6a3baccfed2d4e7e7c13f2db2b 223 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 78 93 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMBLS11_08440 a5210f6a3baccfed2d4e7e7c13f2db2b 223 Gene3D G3DSA:3.30.930.10 7 211 2.6E-59 T 14-10-2018 AMBLS11_08440 a5210f6a3baccfed2d4e7e7c13f2db2b 223 Hamap MF_00013 Octanoyltransferase [lipB]. 12 213 36.322 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMBLS11_08440 a5210f6a3baccfed2d4e7e7c13f2db2b 223 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 82 135 1.0E-15 T 14-10-2018 AMBLS11_09595 e31903cbf33895d8a46f366271457161 276 SMART SM00450 151 270 4.1E-15 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09595 e31903cbf33895d8a46f366271457161 276 SMART SM00450 18 129 1.9E-6 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09595 e31903cbf33895d8a46f366271457161 276 Gene3D G3DSA:3.40.250.10 152 276 4.7E-39 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_09595 e31903cbf33895d8a46f366271457161 276 SUPERFAMILY SSF52821 3 132 7.46E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_09595 e31903cbf33895d8a46f366271457161 276 Pfam PF00581 Rhodanese-like domain 155 266 3.7E-10 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09595 e31903cbf33895d8a46f366271457161 276 Pfam PF00581 Rhodanese-like domain 59 125 1.5E-6 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09595 e31903cbf33895d8a46f366271457161 276 Gene3D G3DSA:3.40.250.10 3 145 1.2E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_09595 e31903cbf33895d8a46f366271457161 276 ProSitePatterns PS00683 Rhodanese C-terminal signature. 254 264 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMBLS11_09595 e31903cbf33895d8a46f366271457161 276 SUPERFAMILY SSF52821 161 275 1.44E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_10810 564998f38b2592d9220d3d148d37c134 217 Pfam PF08761 dUTPase 7 171 8.1E-28 T 14-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 AMBLS11_10810 564998f38b2592d9220d3d148d37c134 217 Gene3D G3DSA:1.10.4010.10 1 217 1.8E-69 T 14-10-2018 AMBLS11_10810 564998f38b2592d9220d3d148d37c134 217 SUPERFAMILY SSF101386 1 216 9.81E-63 T 14-10-2018 AMBLS11_04445 4e70a2be991a4c2c066bad71dc380ed2 297 Gene3D G3DSA:3.90.550.10 1 297 4.9E-88 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04445 4e70a2be991a4c2c066bad71dc380ed2 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 273 7.3E-110 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AMBLS11_04445 4e70a2be991a4c2c066bad71dc380ed2 297 SUPERFAMILY SSF53448 5 285 4.73E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04445 4e70a2be991a4c2c066bad71dc380ed2 297 Pfam PF00483 Nucleotidyl transferase 6 277 1.1E-28 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMBLS11_11035 9585c1e5207fb923ca50c76913d1febb 230 Gene3D G3DSA:3.40.50.1360 2 230 3.7E-69 T 14-10-2018 AMBLS11_11035 9585c1e5207fb923ca50c76913d1febb 230 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 227 4.6E-57 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AMBLS11_11035 9585c1e5207fb923ca50c76913d1febb 230 SUPERFAMILY SSF100950 6 227 3.07E-54 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_11035 9585c1e5207fb923ca50c76913d1febb 230 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 224 2.5E-56 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AMBLS11_10775 ef6205919132449f0eef8a2bb60cc599 126 SUPERFAMILY SSF54593 1 122 6.85E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_10775 ef6205919132449f0eef8a2bb60cc599 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 107 1.3E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMBLS11_10775 ef6205919132449f0eef8a2bb60cc599 126 Gene3D G3DSA:3.10.180.10 1 109 6.3E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_17115 eeb627a9e8202c77d66223282576fd4f 127 SUPERFAMILY SSF54593 1 126 9.13E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_17115 eeb627a9e8202c77d66223282576fd4f 127 Gene3D G3DSA:3.10.180.10 7 126 2.3E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_17115 eeb627a9e8202c77d66223282576fd4f 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 4.2E-21 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMBLS11_02200 9ef1a094fc1b66c40b002664ecbf3d23 291 Pfam PF00892 EamA-like transporter family 13 137 1.4E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_02200 9ef1a094fc1b66c40b002664ecbf3d23 291 Pfam PF00892 EamA-like transporter family 148 274 6.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_02200 9ef1a094fc1b66c40b002664ecbf3d23 291 SUPERFAMILY SSF103481 40 137 3.79E-11 T 14-10-2018 AMBLS11_02200 9ef1a094fc1b66c40b002664ecbf3d23 291 SUPERFAMILY SSF103481 185 278 3.92E-12 T 14-10-2018 AMBLS11_15765 8d2b5e78126ba625f3dce38e68fcb141 268 SUPERFAMILY SSF53335 25 201 5.97E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_15765 8d2b5e78126ba625f3dce38e68fcb141 268 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMBLS11_15765 8d2b5e78126ba625f3dce38e68fcb141 268 Gene3D G3DSA:3.40.50.150 1 263 2.5E-56 T 14-10-2018 AMBLS11_15765 8d2b5e78126ba625f3dce38e68fcb141 268 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 1 268 51.013 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 AMBLS11_15765 8d2b5e78126ba625f3dce38e68fcb141 268 Pfam PF01170 Putative RNA methylase family UPF0020 48 130 2.6E-5 T 14-10-2018 IPR000241 Putative RNA methylase domain AMBLS11_03255 9f887f9350ec9379d08cd997613e340d 202 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 123 198 1.7E-15 T 14-10-2018 IPR006260 TonB/TolA, C-terminal AMBLS11_03255 9f887f9350ec9379d08cd997613e340d 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 138 156 1.5E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_03255 9f887f9350ec9379d08cd997613e340d 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 59 69 1.5E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_03255 9f887f9350ec9379d08cd997613e340d 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 117 138 1.5E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_03255 9f887f9350ec9379d08cd997613e340d 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 174 1.5E-12 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_03255 9f887f9350ec9379d08cd997613e340d 202 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 122 199 3.8E-19 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMBLS11_03255 9f887f9350ec9379d08cd997613e340d 202 Gene3D G3DSA:3.30.1150.10 107 201 1.4E-23 T 14-10-2018 AMBLS11_03255 9f887f9350ec9379d08cd997613e340d 202 SUPERFAMILY SSF74653 113 194 5.62E-25 T 14-10-2018 AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 SUPERFAMILY SSF100950 183 434 6.45E-68 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 Gene3D G3DSA:3.30.750.70 181 284 2.1E-41 T 14-10-2018 AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 Gene3D G3DSA:3.40.1080.20 285 433 5.2E-62 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 267 419 5.8E-65 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 Pfam PF00583 Acetyltransferase (GNAT) family 509 590 3.8E-8 T 14-10-2018 IPR000182 GNAT domain AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 13 180 4.9E-19 T 14-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 Gene3D G3DSA:3.40.630.30 449 612 1.2E-26 T 14-10-2018 AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 Gene3D G3DSA:3.40.1080.10 5 179 2.6E-58 T 14-10-2018 AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 SUPERFAMILY SSF55729 402 594 7.75E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_00675 f4f9ab411fd70bc150d3ddf53ba5bd1d 613 SUPERFAMILY SSF100950 13 217 3.07E-36 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 SUPERFAMILY SSF63380 108 275 4.77E-34 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 Pfam PF00970 Oxidoreductase FAD-binding domain 205 269 8.6E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 SUPERFAMILY SSF52343 262 406 3.4E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 6 410 3.9E-224 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 Gene3D G3DSA:3.40.50.80 278 396 3.1E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 Gene3D G3DSA:2.40.30.10 129 267 5.9E-50 T 14-10-2018 AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 Gene3D G3DSA:3.10.20.30 37 128 1.7E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 SUPERFAMILY SSF54292 38 125 7.76E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 4 410 61.983 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 117 1.7E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 Pfam PF00175 Oxidoreductase NAD-binding domain 280 388 3.7E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMBLS11_15920 7566ac85d0205c276e56e41be8219284 410 PIRSF PIRSF000044 1 410 7.1E-217 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AMBLS11_10575 71271b95e036ddad08e847e92663adaa 209 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 14 207 19.151 T 14-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AMBLS11_10575 71271b95e036ddad08e847e92663adaa 209 Pfam PF01794 Ferric reductase like transmembrane component 54 167 3.8E-16 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 528 536 1.4E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 404 417 1.4E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 476 488 1.4E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 Gene3D G3DSA:2.40.50.590 3 132 5.4E-25 T 14-10-2018 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 Gene3D G3DSA:3.30.70.2250 22 89 5.4E-25 T 14-10-2018 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 Pfam PF03104 DNA polymerase family B, exonuclease domain 58 286 2.8E-17 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 Gene3D G3DSA:3.90.1600.10 337 427 1.9E-23 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 Gene3D G3DSA:3.90.1600.10 446 616 7.5E-45 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 SUPERFAMILY SSF56672 375 762 3.28E-110 T 14-10-2018 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 Gene3D G3DSA:3.30.420.10 138 336 2.6E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 SMART SM00486 135 542 1.1E-49 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 Pfam PF00136 DNA polymerase family B 386 724 8.6E-36 T 14-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 Gene3D G3DSA:1.10.132.60 623 767 1.1E-55 T 14-10-2018 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 ProSitePatterns PS00116 DNA polymerase family B signature. 530 538 - T 14-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_15500 f69a55380ae4de3769d16ef2c3eca9cb 767 SUPERFAMILY SSF53098 2 377 2.59E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_05200 73ce1f3df37e2af634e51be542573735 268 SMART SM00382 37 231 4.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_05200 73ce1f3df37e2af634e51be542573735 268 Pfam PF00005 ABC transporter 30 182 7.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_05200 73ce1f3df37e2af634e51be542573735 268 SUPERFAMILY SSF52540 4 252 3.97E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05200 73ce1f3df37e2af634e51be542573735 268 Gene3D G3DSA:3.40.50.300 2 268 2.2E-64 T 14-10-2018 AMBLS11_03800 1b5131728b1cee44b5650c9b20d96554 229 SUPERFAMILY SSF46894 125 221 3.68E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_03800 1b5131728b1cee44b5650c9b20d96554 229 SMART SM00862 146 221 1.5E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_03800 1b5131728b1cee44b5650c9b20d96554 229 Pfam PF00072 Response regulator receiver domain 3 112 3.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03800 1b5131728b1cee44b5650c9b20d96554 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 1.6E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_03800 1b5131728b1cee44b5650c9b20d96554 229 Gene3D G3DSA:3.40.50.2300 1 123 1.4E-32 T 14-10-2018 AMBLS11_03800 1b5131728b1cee44b5650c9b20d96554 229 Gene3D G3DSA:1.10.10.10 124 228 1.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03800 1b5131728b1cee44b5650c9b20d96554 229 SUPERFAMILY SSF52172 1 119 1.22E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_03800 1b5131728b1cee44b5650c9b20d96554 229 SMART SM00448 1 112 7.0E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_00325 74b0684ef5f865959752c65c6aefb72b 285 Gene3D G3DSA:1.10.357.140 20 164 2.4E-42 T 14-10-2018 AMBLS11_00325 74b0684ef5f865959752c65c6aefb72b 285 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 283 28.916 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AMBLS11_00325 74b0684ef5f865959752c65c6aefb72b 285 Pfam PF01040 UbiA prenyltransferase family 23 264 9.9E-65 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMBLS11_00325 74b0684ef5f865959752c65c6aefb72b 285 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 5 282 3.6E-102 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AMBLS11_00325 74b0684ef5f865959752c65c6aefb72b 285 Gene3D G3DSA:1.20.120.1780 165 285 4.8E-13 T 14-10-2018 AMBLS11_18410 43d184f9bb425624c269a48694e47870 344 SMART SM00558 126 279 1.1E-12 T 14-10-2018 IPR003347 JmjC domain AMBLS11_18410 43d184f9bb425624c269a48694e47870 344 Pfam PF13621 Cupin-like domain 26 266 1.9E-55 T 14-10-2018 AMBLS11_18410 43d184f9bb425624c269a48694e47870 344 SUPERFAMILY SSF51197 27 333 4.94E-50 T 14-10-2018 AMBLS11_18410 43d184f9bb425624c269a48694e47870 344 Gene3D G3DSA:2.60.120.1660 4 283 6.9E-49 T 14-10-2018 AMBLS11_06485 381519612bf3ed72000023cd931c1d07 346 Pfam PF01594 AI-2E family transporter 13 325 1.1E-61 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like AMBLS11_11860 f4c3e2fbed1cd6f09b4229b35c1a6f83 245 SUPERFAMILY SSF51366 1 242 1.61E-67 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMBLS11_11860 f4c3e2fbed1cd6f09b4229b35c1a6f83 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 3.3E-79 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AMBLS11_11860 f4c3e2fbed1cd6f09b4229b35c1a6f83 245 Pfam PF00977 Histidine biosynthesis protein 1 234 1.1E-77 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AMBLS11_11860 f4c3e2fbed1cd6f09b4229b35c1a6f83 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.218 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AMBLS11_11860 f4c3e2fbed1cd6f09b4229b35c1a6f83 245 Gene3D G3DSA:3.20.20.70 1 245 6.1E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_08310 c2f9f76a9cdbaa1f2f7045d82564a2da 168 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 54 1.7E-6 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMBLS11_08310 c2f9f76a9cdbaa1f2f7045d82564a2da 168 SUPERFAMILY SSF47741 72 158 3.79E-31 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMBLS11_08310 c2f9f76a9cdbaa1f2f7045d82564a2da 168 Pfam PF01799 [2Fe-2S] binding domain 72 144 1.4E-28 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMBLS11_08310 c2f9f76a9cdbaa1f2f7045d82564a2da 168 Gene3D G3DSA:1.10.150.120 74 166 1.4E-26 T 14-10-2018 AMBLS11_08310 c2f9f76a9cdbaa1f2f7045d82564a2da 168 SUPERFAMILY SSF54292 2 77 1.09E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMBLS11_08310 c2f9f76a9cdbaa1f2f7045d82564a2da 168 Gene3D G3DSA:3.10.20.30 1 73 5.1E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_08310 c2f9f76a9cdbaa1f2f7045d82564a2da 168 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMBLS11_01530 6baab2cff672fef5f9e1a283d6499eba 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 340 39.419 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMBLS11_01530 6baab2cff672fef5f9e1a283d6499eba 348 Pfam PF01339 CheB methylesterase 157 335 1.7E-56 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMBLS11_01530 6baab2cff672fef5f9e1a283d6499eba 348 Pfam PF00072 Response regulator receiver domain 5 107 6.9E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01530 6baab2cff672fef5f9e1a283d6499eba 348 SMART SM00448 3 122 1.6E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01530 6baab2cff672fef5f9e1a283d6499eba 348 PIRSF PIRSF000876 1 343 1.8E-129 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMBLS11_01530 6baab2cff672fef5f9e1a283d6499eba 348 SUPERFAMILY SSF52738 153 340 8.11E-68 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMBLS11_01530 6baab2cff672fef5f9e1a283d6499eba 348 SUPERFAMILY SSF52172 1 107 5.55E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_01530 6baab2cff672fef5f9e1a283d6499eba 348 Gene3D G3DSA:3.40.50.2300 2 132 3.9E-26 T 14-10-2018 AMBLS11_01530 6baab2cff672fef5f9e1a283d6499eba 348 Gene3D G3DSA:3.40.50.180 146 343 3.4E-72 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMBLS11_07305 9b1df3f4f501630ca6b850019f7a72c7 294 Gene3D G3DSA:3.90.1200.10 104 294 6.4E-60 T 14-10-2018 AMBLS11_07305 9b1df3f4f501630ca6b850019f7a72c7 294 SUPERFAMILY SSF56112 5 285 4.96E-38 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_07305 9b1df3f4f501630ca6b850019f7a72c7 294 Pfam PF03881 Fructosamine kinase 1 293 3.2E-93 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AMBLS11_07305 9b1df3f4f501630ca6b850019f7a72c7 294 PIRSF PIRSF006221 1 294 5.6E-86 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AMBLS11_07305 9b1df3f4f501630ca6b850019f7a72c7 294 Gene3D G3DSA:3.30.200.20 1 96 1.9E-16 T 14-10-2018 AMBLS11_03165 195cd86cb6ebb8e1f56e501961e16e22 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.715 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMBLS11_03165 195cd86cb6ebb8e1f56e501961e16e22 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 2.8E-74 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMBLS11_03165 195cd86cb6ebb8e1f56e501961e16e22 266 Pfam PF02673 Bacitracin resistance protein BacA 7 259 5.6E-83 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMBLS11_04795 b8591861b039796680856150f629246d 161 Pfam PF03646 FlaG protein 54 158 2.7E-24 T 14-10-2018 IPR005186 FlaG protein AMBLS11_04795 b8591861b039796680856150f629246d 161 Gene3D G3DSA:3.30.160.170 53 147 3.1E-16 T 14-10-2018 IPR035924 FlaG-like superfamily AMBLS11_04795 b8591861b039796680856150f629246d 161 SUPERFAMILY SSF160214 66 160 8.5E-23 T 14-10-2018 IPR035924 FlaG-like superfamily AMBLS11_14285 a2ba990bbb805310b45c01e06cc45dd5 175 Gene3D G3DSA:1.10.260.40 2 73 1.5E-17 T 14-10-2018 AMBLS11_14285 a2ba990bbb805310b45c01e06cc45dd5 175 Pfam PF01381 Helix-turn-helix 13 66 1.9E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_14285 a2ba990bbb805310b45c01e06cc45dd5 175 SUPERFAMILY SSF51182 77 169 1.64E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_14285 a2ba990bbb805310b45c01e06cc45dd5 175 SMART SM00530 12 67 3.9E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_14285 a2ba990bbb805310b45c01e06cc45dd5 175 SUPERFAMILY SSF47413 6 69 1.24E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_14285 a2ba990bbb805310b45c01e06cc45dd5 175 Gene3D G3DSA:2.60.120.10 80 175 1.3E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_07060 85aa326ea32a4134bf25c86eafa84a4d 129 SUPERFAMILY SSF55021 1 51 6.87E-12 T 14-10-2018 AMBLS11_07060 85aa326ea32a4134bf25c86eafa84a4d 129 Gene3D G3DSA:3.30.2130.10 1 129 1.1E-35 T 14-10-2018 AMBLS11_07060 85aa326ea32a4134bf25c86eafa84a4d 129 Pfam PF13840 ACT domain 58 119 1.2E-17 T 14-10-2018 IPR027795 CASTOR, ACT domain AMBLS11_07060 85aa326ea32a4134bf25c86eafa84a4d 129 PIRSF PIRSF008459 2 128 9.3E-37 T 14-10-2018 IPR016540 Uncharacterised conserved protein UCP008459 AMBLS11_07060 85aa326ea32a4134bf25c86eafa84a4d 129 SUPERFAMILY SSF55021 61 122 7.08E-17 T 14-10-2018 AMBLS11_00535 4ac6fe69323b43faa08705f848afbce5 90 SMART SM01409 8 61 4.3E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMBLS11_00535 4ac6fe69323b43faa08705f848afbce5 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.7E-26 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_00535 4ac6fe69323b43faa08705f848afbce5 90 SUPERFAMILY SSF63562 1 78 2.27E-25 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMBLS11_00535 4ac6fe69323b43faa08705f848afbce5 90 Gene3D G3DSA:3.90.940.10 1 90 3.1E-28 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMBLS11_00535 4ac6fe69323b43faa08705f848afbce5 90 Pfam PF01192 RNA polymerase Rpb6 10 60 2.6E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMBLS11_00535 4ac6fe69323b43faa08705f848afbce5 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.4 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMBLS11_09210 66ef1966a867f76a8d29e423de6e93b2 217 SMART SM00882 5 201 1.8E-75 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMBLS11_09210 66ef1966a867f76a8d29e423de6e93b2 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 2.4E-100 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AMBLS11_09210 66ef1966a867f76a8d29e423de6e93b2 217 Pfam PF01144 Coenzyme A transferase 5 200 1.2E-42 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMBLS11_09210 66ef1966a867f76a8d29e423de6e93b2 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 14-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AMBLS11_09210 66ef1966a867f76a8d29e423de6e93b2 217 SUPERFAMILY SSF100950 4 216 1.23E-74 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_09210 66ef1966a867f76a8d29e423de6e93b2 217 Gene3D G3DSA:3.40.1080.10 1 212 5.4E-100 T 14-10-2018 AMBLS11_17120 7307f934e2309f754ff0e5d06b00e212 272 SUPERFAMILY SSF82861 22 106 2.35E-16 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMBLS11_17120 7307f934e2309f754ff0e5d06b00e212 272 Gene3D G3DSA:2.30.30.60 123 171 2.8E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_17120 7307f934e2309f754ff0e5d06b00e212 272 Pfam PF05552 Conserved TM helix 13 58 3.5E-11 T 14-10-2018 IPR008910 Conserved TM helix AMBLS11_17120 7307f934e2309f754ff0e5d06b00e212 272 SUPERFAMILY SSF82689 174 271 1.31E-27 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMBLS11_17120 7307f934e2309f754ff0e5d06b00e212 272 Gene3D G3DSA:3.30.70.100 173 264 2.4E-23 T 14-10-2018 AMBLS11_17120 7307f934e2309f754ff0e5d06b00e212 272 Pfam PF00924 Mechanosensitive ion channel 67 260 5.3E-40 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_17120 7307f934e2309f754ff0e5d06b00e212 272 SUPERFAMILY SSF50182 108 171 4.25E-13 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_06600 8315262f1a427d245a29dff4441feafd 561 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 516 2.7E-23 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMBLS11_06600 8315262f1a427d245a29dff4441feafd 561 SUPERFAMILY SSF52540 1 220 4.33E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06600 8315262f1a427d245a29dff4441feafd 561 Gene3D G3DSA:3.40.50.300 1 265 2.5E-44 T 14-10-2018 AMBLS11_06600 8315262f1a427d245a29dff4441feafd 561 Gene3D G3DSA:3.40.50.300 270 557 4.9E-51 T 14-10-2018 AMBLS11_06600 8315262f1a427d245a29dff4441feafd 561 SUPERFAMILY SSF52540 4 507 1.47E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06600 8315262f1a427d245a29dff4441feafd 561 PIRSF PIRSF003128 1 561 3.4E-153 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMBLS11_06600 8315262f1a427d245a29dff4441feafd 561 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 556 1.8E-166 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMBLS11_10655 f36f52cd0af197ce9b47e30c38db8812 420 SUPERFAMILY SSF52540 20 201 1.2E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10655 f36f52cd0af197ce9b47e30c38db8812 420 ProSitePatterns PS00211 ABC transporters family signature. 112 126 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_10655 f36f52cd0af197ce9b47e30c38db8812 420 SMART SM00382 20 189 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_10655 f36f52cd0af197ce9b47e30c38db8812 420 Gene3D G3DSA:2.40.50.100 332 419 7.0E-6 T 14-10-2018 AMBLS11_10655 f36f52cd0af197ce9b47e30c38db8812 420 Gene3D G3DSA:3.40.50.300 8 210 5.8E-47 T 14-10-2018 AMBLS11_10655 f36f52cd0af197ce9b47e30c38db8812 420 Pfam PF00005 ABC transporter 20 138 5.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_03740 9218a97ebcb51dfb97e528bb73718f65 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 249 3.3E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_03740 9218a97ebcb51dfb97e528bb73718f65 254 Gene3D G3DSA:3.40.190.10 123 212 5.7E-16 T 14-10-2018 AMBLS11_03740 9218a97ebcb51dfb97e528bb73718f65 254 Gene3D G3DSA:3.40.190.10 42 249 5.7E-16 T 14-10-2018 AMBLS11_03740 9218a97ebcb51dfb97e528bb73718f65 254 SUPERFAMILY SSF53850 40 249 1.19E-25 T 14-10-2018 AMBLS11_08345 02fbca6c25d3cbc86e216fa114b09a0e 208 Pfam PF04356 Protein of unknown function (DUF489) 8 197 1.9E-76 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD AMBLS11_08345 02fbca6c25d3cbc86e216fa114b09a0e 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 34.55 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD AMBLS11_08345 02fbca6c25d3cbc86e216fa114b09a0e 208 SUPERFAMILY SSF101322 6 205 4.97E-72 T 14-10-2018 IPR035932 HflD-like superfamily AMBLS11_08345 02fbca6c25d3cbc86e216fa114b09a0e 208 Gene3D G3DSA:1.10.3890.10 4 208 4.8E-76 T 14-10-2018 IPR035932 HflD-like superfamily AMBLS11_08345 02fbca6c25d3cbc86e216fa114b09a0e 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 30 196 2.0E-45 T 14-10-2018 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 SUPERFAMILY SSF48173 190 473 6.41E-116 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 PRINTS PR00147 DNA photolyase signature 320 336 9.9E-22 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 PRINTS PR00147 DNA photolyase signature 340 358 9.9E-22 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 PRINTS PR00147 DNA photolyase signature 379 393 9.9E-22 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 PRINTS PR00147 DNA photolyase signature 138 154 9.9E-22 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 Gene3D G3DSA:3.40.50.620 7 201 3.4E-87 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 Gene3D G3DSA:1.10.579.10 289 474 2.6E-85 T 14-10-2018 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 320 332 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 Gene3D G3DSA:1.25.40.80 129 282 3.4E-87 T 14-10-2018 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 SUPERFAMILY SSF52425 5 171 1.7E-54 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 Pfam PF03441 FAD binding domain of DNA photolyase 271 470 3.5E-89 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AMBLS11_09435 99b9b4a404aa494a79e71474cecbafe4 474 Pfam PF00875 DNA photolyase 6 158 3.7E-43 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AMBLS11_06305 21199a7dafb4a7c2ba4014897386c62c 322 Gene3D G3DSA:1.20.58.1130 9 205 2.2E-86 T 14-10-2018 AMBLS11_06305 21199a7dafb4a7c2ba4014897386c62c 322 Gene3D G3DSA:1.20.1420.30 35 309 2.2E-86 T 14-10-2018 AMBLS11_06305 21199a7dafb4a7c2ba4014897386c62c 322 Pfam PF01699 Sodium/calcium exchanger protein 6 144 1.4E-22 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMBLS11_06305 21199a7dafb4a7c2ba4014897386c62c 322 Pfam PF01699 Sodium/calcium exchanger protein 174 317 1.6E-33 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMBLS11_06305 21199a7dafb4a7c2ba4014897386c62c 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 312 6.1E-71 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AMBLS11_05240 f158b71a3f5d205405a28e41936d2d59 148 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 5 148 1.8E-43 T 14-10-2018 IPR014320 Phage shock protein, PspC AMBLS11_05240 f158b71a3f5d205405a28e41936d2d59 148 Pfam PF04024 PspC domain 5 63 1.5E-19 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 Pfam PF00183 Hsp90 protein 223 637 2.3E-134 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 186 1.4E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 Gene3D G3DSA:3.30.230.80 241 408 3.3E-72 T 14-10-2018 AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 Gene3D G3DSA:3.40.50.11260 409 498 1.3E-34 T 14-10-2018 AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 636 32.915 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 Gene3D G3DSA:3.30.565.10 1 228 4.8E-79 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 PIRSF PIRSF002583 2 640 1.9E-224 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 SUPERFAMILY SSF54211 242 497 2.96E-101 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 SUPERFAMILY SSF55874 8 218 1.11E-69 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 PRINTS PR00775 90kDa heat shock protein signature 175 192 3.0E-63 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.0E-63 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.0E-63 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.0E-63 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.0E-63 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 PRINTS PR00775 90kDa heat shock protein signature 193 211 3.0E-63 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.0E-63 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 SUPERFAMILY SSF110942 524 636 1.24E-34 T 14-10-2018 IPR037196 HSP90, C-terminal domain AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 Gene3D G3DSA:1.20.120.790 504 637 1.4E-43 T 14-10-2018 IPR037196 HSP90, C-terminal domain AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 SMART SM00387 30 187 1.3E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_11915 9635cd4be46bcda7a2be67eafbe56d0d 640 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 AMBLS11_03605 0883642a3511ffacfcaa9ca6674cbca5 192 PIRSF PIRSF028513 6 192 1.7E-60 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AMBLS11_03605 0883642a3511ffacfcaa9ca6674cbca5 192 Gene3D G3DSA:2.60.450.10 65 192 3.8E-41 T 14-10-2018 AMBLS11_03605 0883642a3511ffacfcaa9ca6674cbca5 192 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 15 188 4.5E-46 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AMBLS11_03605 0883642a3511ffacfcaa9ca6674cbca5 192 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 16 188 6.6E-41 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AMBLS11_03605 0883642a3511ffacfcaa9ca6674cbca5 192 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 7 191 24.739 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AMBLS11_17070 9b6f2cdbfbcbcbdb05379608d3e957e1 207 Pfam PF03737 Aldolase/RraA 14 160 1.8E-39 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMBLS11_17070 9b6f2cdbfbcbcbdb05379608d3e957e1 207 Gene3D G3DSA:3.50.30.100 6 182 1.6E-49 T 14-10-2018 AMBLS11_17070 9b6f2cdbfbcbcbdb05379608d3e957e1 207 SUPERFAMILY SSF89562 11 168 1.07E-41 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AMBLS11_13085 e771a213c06ca442b6396bb0e9c93993 273 Gene3D G3DSA:3.40.630.30 45 254 1.2E-48 T 14-10-2018 AMBLS11_13085 e771a213c06ca442b6396bb0e9c93993 273 SUPERFAMILY SSF55729 41 242 4.71E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_13085 e771a213c06ca442b6396bb0e9c93993 273 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 38 271 9.4E-76 T 14-10-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted AMBLS11_13085 e771a213c06ca442b6396bb0e9c93993 273 Pfam PF13444 Acetyltransferase (GNAT) domain 61 161 8.3E-18 T 14-10-2018 AMBLS11_09655 dde50c02419912b06256a27141942862 684 SUPERFAMILY SSF53649 454 610 3.66E-6 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMBLS11_09655 dde50c02419912b06256a27141942862 684 Pfam PF08665 PglZ domain 447 604 2.9E-7 T 14-10-2018 IPR013973 PglZ domain AMBLS11_17085 136c99992277c57d4efaf4c4050013c2 132 Gene3D G3DSA:3.30.2130.10 1 132 3.0E-41 T 14-10-2018 AMBLS11_17085 136c99992277c57d4efaf4c4050013c2 132 SUPERFAMILY SSF55021 70 131 2.52E-19 T 14-10-2018 AMBLS11_17085 136c99992277c57d4efaf4c4050013c2 132 Pfam PF13840 ACT domain 72 128 7.8E-13 T 14-10-2018 IPR027795 CASTOR, ACT domain AMBLS11_17085 136c99992277c57d4efaf4c4050013c2 132 SUPERFAMILY SSF55021 3 68 2.56E-13 T 14-10-2018 AMBLS11_17085 136c99992277c57d4efaf4c4050013c2 132 Pfam PF10000 ACT domain 3 71 1.2E-17 T 14-10-2018 IPR018717 Domain of unknown function DUF2241 AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 SUPERFAMILY SSF50104 2 63 2.31E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 SUPERFAMILY SSF50249 130 187 1.23E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 Gene3D G3DSA:2.40.50.140 130 188 3.9E-28 T 14-10-2018 AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 SMART SM01185 69 123 2.5E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.739 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 SUPERFAMILY SSF50249 69 128 6.0E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 PIRSF PIRSF005901 2 188 5.2E-65 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 Gene3D G3DSA:2.40.50.140 66 129 2.4E-28 T 14-10-2018 AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 SMART SM00841 131 186 2.3E-33 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.5E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 Gene3D G3DSA:2.30.30.30 1 64 1.2E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 1.0E-24 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 1.0E-78 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AMBLS11_02885 668f35abd0b0fc4e050fdd43d6dc41f7 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 6.7E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMBLS11_04205 e4aca7aba9cf800cc711053435fb88fb 303 SMART SM00382 42 196 3.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04205 e4aca7aba9cf800cc711053435fb88fb 303 SUPERFAMILY SSF52540 5 255 3.84E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04205 e4aca7aba9cf800cc711053435fb88fb 303 Gene3D G3DSA:3.40.50.300 28 186 1.5E-15 T 14-10-2018 AMBLS11_04205 e4aca7aba9cf800cc711053435fb88fb 303 Pfam PF13401 AAA domain 42 172 3.0E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 520 544 1.2E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 401 423 1.2E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 SUPERFAMILY SSF51905 398 630 1.07E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 401 676 4.7E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 31 352 7.1E-77 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 Gene3D G3DSA:3.40.50.720 400 689 9.4E-119 T 14-10-2018 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 Gene3D G3DSA:3.20.20.70 27 393 6.5E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 Gene3D G3DSA:3.50.50.60 496 649 9.4E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 524 542 8.5E-16 T 14-10-2018 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 642 658 8.5E-16 T 14-10-2018 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 402 421 8.5E-16 T 14-10-2018 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 484 502 8.5E-16 T 14-10-2018 AMBLS11_14240 3390f3ffb3a169ca1f746b5c5b4dd811 696 SUPERFAMILY SSF51395 25 387 2.93E-108 T 14-10-2018 AMBLS11_02170 069f36ba1309d14fbba1d52dc44ad133 86 SUPERFAMILY SSF52833 1 84 3.55E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_02170 069f36ba1309d14fbba1d52dc44ad133 86 Gene3D G3DSA:3.40.30.10 1 84 3.1E-27 T 14-10-2018 AMBLS11_02170 069f36ba1309d14fbba1d52dc44ad133 86 PRINTS PR00160 Glutaredoxin signature 61 74 8.2E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup AMBLS11_02170 069f36ba1309d14fbba1d52dc44ad133 86 PRINTS PR00160 Glutaredoxin signature 4 22 8.2E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup AMBLS11_02170 069f36ba1309d14fbba1d52dc44ad133 86 PRINTS PR00160 Glutaredoxin signature 47 60 8.2E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup AMBLS11_02170 069f36ba1309d14fbba1d52dc44ad133 86 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 1.3E-35 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AMBLS11_02170 069f36ba1309d14fbba1d52dc44ad133 86 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AMBLS11_02170 069f36ba1309d14fbba1d52dc44ad133 86 Pfam PF00462 Glutaredoxin 4 64 3.5E-21 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMBLS11_01570 e95af4b859cf405090c6d940f75dd403 205 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 17 175 27.682 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMBLS11_01570 e95af4b859cf405090c6d940f75dd403 205 Gene3D G3DSA:3.30.1330.200 20 182 7.6E-49 T 14-10-2018 IPR038592 CheD-like superfamily AMBLS11_01570 e95af4b859cf405090c6d940f75dd403 205 SUPERFAMILY SSF64438 22 175 2.01E-47 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMBLS11_01570 e95af4b859cf405090c6d940f75dd403 205 Pfam PF03975 CheD chemotactic sensory transduction 64 171 2.2E-27 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMBLS11_00100 32013d96525459568da76047e1edc93f 439 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 18 436 4.6E-127 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 AMBLS11_00100 32013d96525459568da76047e1edc93f 439 SUPERFAMILY SSF48013 11 153 1.96E-26 T 14-10-2018 IPR035926 NusB-like superfamily AMBLS11_00100 32013d96525459568da76047e1edc93f 439 Pfam PF01029 NusB family 17 132 1.0E-16 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMBLS11_00100 32013d96525459568da76047e1edc93f 439 Gene3D G3DSA:3.30.70.1170 177 234 1.1E-11 T 14-10-2018 AMBLS11_00100 32013d96525459568da76047e1edc93f 439 SUPERFAMILY SSF53335 143 436 5.52E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_00100 32013d96525459568da76047e1edc93f 439 Gene3D G3DSA:1.10.940.10 6 143 3.5E-36 T 14-10-2018 IPR035926 NusB-like superfamily AMBLS11_00100 32013d96525459568da76047e1edc93f 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 372 388 6.5E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMBLS11_00100 32013d96525459568da76047e1edc93f 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 255 265 6.5E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMBLS11_00100 32013d96525459568da76047e1edc93f 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 322 334 6.5E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMBLS11_00100 32013d96525459568da76047e1edc93f 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 226 240 6.5E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMBLS11_00100 32013d96525459568da76047e1edc93f 439 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 419 436 6.5E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMBLS11_00100 32013d96525459568da76047e1edc93f 439 Pfam PF01189 16S rRNA methyltransferase RsmB/F 244 434 8.0E-68 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AMBLS11_00100 32013d96525459568da76047e1edc93f 439 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 321 332 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AMBLS11_00100 32013d96525459568da76047e1edc93f 439 Gene3D G3DSA:3.40.50.150 235 437 2.6E-67 T 14-10-2018 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 ProSitePatterns PS00902 Glutamate 5-kinase signature. 205 222 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 SUPERFAMILY SSF53633 7 253 4.71E-59 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 Pfam PF01472 PUA domain 275 348 6.8E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 SUPERFAMILY SSF88697 275 364 1.93E-21 T 14-10-2018 IPR015947 PUA-like superfamily AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 Pfam PF00696 Amino acid kinase family 8 233 6.8E-36 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 7.6E-37 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 7.6E-37 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 7.6E-37 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 7.6E-37 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 Gene3D G3DSA:3.40.1160.10 3 262 1.3E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 364 8.9E-120 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 SMART SM00359 275 357 2.3E-17 T 14-10-2018 IPR002478 PUA domain GO:0003723 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 261 32.606 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 PIRSF PIRSF000729 3 366 1.2E-123 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMBLS11_18745 cabefaa3486faa79a4c45aff31d6aa0d 366 Gene3D G3DSA:2.30.130.10 264 365 1.1E-31 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMBLS11_07025 56422a63684cda23bdc152ec94642890 805 SUPERFAMILY SSF82171 113 529 2.62E-10 T 14-10-2018 AMBLS11_07025 56422a63684cda23bdc152ec94642890 805 Pfam PF00326 Prolyl oligopeptidase family 643 798 1.0E-24 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_07025 56422a63684cda23bdc152ec94642890 805 SUPERFAMILY SSF53474 540 797 1.45E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07025 56422a63684cda23bdc152ec94642890 805 Gene3D G3DSA:3.40.50.1820 532 803 4.5E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07865 d575970d5d025557da5340867a3f436b 206 Gene3D G3DSA:3.90.950.10 2 199 1.3E-52 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMBLS11_07865 d575970d5d025557da5340867a3f436b 206 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 192 7.3E-47 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMBLS11_07865 d575970d5d025557da5340867a3f436b 206 SUPERFAMILY SSF52972 3 192 6.02E-50 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMBLS11_07865 d575970d5d025557da5340867a3f436b 206 PIRSF PIRSF006305 2 198 6.1E-41 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMBLS11_07865 d575970d5d025557da5340867a3f436b 206 Hamap MF_00528 Septum formation protein Maf [maf]. 3 198 24.603 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMBLS11_07865 d575970d5d025557da5340867a3f436b 206 Pfam PF02545 Maf-like protein 4 193 9.5E-43 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMBLS11_14500 2a9b99cee9a1a58aa5198833e43bf277 362 Gene3D G3DSA:3.40.50.2000 152 348 2.8E-49 T 14-10-2018 AMBLS11_14500 2a9b99cee9a1a58aa5198833e43bf277 362 SUPERFAMILY SSF53756 53 361 2.24E-55 T 14-10-2018 AMBLS11_14500 2a9b99cee9a1a58aa5198833e43bf277 362 Pfam PF00534 Glycosyl transferases group 1 177 339 7.0E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_08540 f707c971d5c1be8bb87e3f619498021d 274 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 15 269 8.4E-104 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AMBLS11_08540 f707c971d5c1be8bb87e3f619498021d 274 Pfam PF00809 Pterin binding enzyme 16 255 9.9E-88 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_08540 f707c971d5c1be8bb87e3f619498021d 274 SUPERFAMILY SSF51717 3 271 5.76E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_08540 f707c971d5c1be8bb87e3f619498021d 274 Gene3D G3DSA:3.20.20.20 3 274 1.4E-111 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_08540 f707c971d5c1be8bb87e3f619498021d 274 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 15 30 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMBLS11_14485 544188204aa73f5a526896e64e96bb1f 278 SUPERFAMILY SSF53790 6 224 7.46E-80 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMBLS11_14485 544188204aa73f5a526896e64e96bb1f 278 PIRSF PIRSF005917 1 278 2.0E-100 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMBLS11_14485 544188204aa73f5a526896e64e96bb1f 278 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 AMBLS11_14485 544188204aa73f5a526896e64e96bb1f 278 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 274 3.4E-86 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMBLS11_14485 544188204aa73f5a526896e64e96bb1f 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 204 7.7E-28 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMBLS11_14485 544188204aa73f5a526896e64e96bb1f 278 Gene3D G3DSA:3.40.1010.10 1 113 4.4E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMBLS11_14485 544188204aa73f5a526896e64e96bb1f 278 Gene3D G3DSA:3.30.950.10 114 233 1.9E-38 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMBLS11_14485 544188204aa73f5a526896e64e96bb1f 278 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 226 36.153 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMBLS11_09485 f19b0bf79143fe04f8b712f97418ceb7 542 PIRSF PIRSF006429 4 530 3.3E-160 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein AMBLS11_09485 f19b0bf79143fe04f8b712f97418ceb7 542 Pfam PF01645 Conserved region in glutamate synthase 153 470 2.4E-89 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMBLS11_09485 f19b0bf79143fe04f8b712f97418ceb7 542 PIRSF PIRSF500060 5 526 2.9E-212 T 14-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria AMBLS11_09485 f19b0bf79143fe04f8b712f97418ceb7 542 Gene3D G3DSA:3.20.20.70 145 497 3.3E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_09485 f19b0bf79143fe04f8b712f97418ceb7 542 SUPERFAMILY SSF51395 4 497 1.67E-132 T 14-10-2018 AMBLS11_18855 c21fc21c43220be457f09488333d3bcb 565 Pfam PF04820 Tryptophan halogenase 12 469 3.9E-122 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMBLS11_18855 c21fc21c43220be457f09488333d3bcb 565 Gene3D G3DSA:3.50.50.60 10 508 6.6E-176 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_18855 c21fc21c43220be457f09488333d3bcb 565 SUPERFAMILY SSF51905 11 439 3.48E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_08570 6122f5f90d38833656b454d2d327f150 151 Pfam PF01814 Hemerythrin HHE cation binding domain 3 118 3.9E-14 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMBLS11_08990 1aa14670c54f9ca21681aef95eb27edd 340 SUPERFAMILY SSF47413 4 62 3.1E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_08990 1aa14670c54f9ca21681aef95eb27edd 340 Pfam PF13377 Periplasmic binding protein-like domain 179 337 1.3E-36 T 14-10-2018 AMBLS11_08990 1aa14670c54f9ca21681aef95eb27edd 340 Gene3D G3DSA:3.40.50.2300 81 329 1.6E-60 T 14-10-2018 AMBLS11_08990 1aa14670c54f9ca21681aef95eb27edd 340 Gene3D G3DSA:3.40.50.2300 169 335 1.6E-60 T 14-10-2018 AMBLS11_08990 1aa14670c54f9ca21681aef95eb27edd 340 SMART SM00354 4 77 1.3E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_08990 1aa14670c54f9ca21681aef95eb27edd 340 SUPERFAMILY SSF53822 61 323 3.7E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_08990 1aa14670c54f9ca21681aef95eb27edd 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 49 6.9E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_08990 1aa14670c54f9ca21681aef95eb27edd 340 Gene3D G3DSA:1.10.260.40 1 62 4.9E-21 T 14-10-2018 AMBLS11_08225 882d2f7ada63538bc43be6e9d6a07c34 313 SUPERFAMILY SSF51735 1 304 1.56E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_08225 882d2f7ada63538bc43be6e9d6a07c34 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 181 2.3E-24 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMBLS11_08225 882d2f7ada63538bc43be6e9d6a07c34 313 Gene3D G3DSA:3.40.50.720 2 309 6.3E-41 T 14-10-2018 AMBLS11_01415 236a392b3958dfb006b7fa7852fc62d5 426 SUPERFAMILY SSF56954 5 415 2.88E-51 T 14-10-2018 AMBLS11_01415 236a392b3958dfb006b7fa7852fc62d5 426 Gene3D G3DSA:1.20.1600.10 27 419 1.6E-36 T 14-10-2018 AMBLS11_01415 236a392b3958dfb006b7fa7852fc62d5 426 Pfam PF02321 Outer membrane efflux protein 35 213 8.0E-10 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_01415 236a392b3958dfb006b7fa7852fc62d5 426 Pfam PF02321 Outer membrane efflux protein 252 414 3.1E-13 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_08595 11a72262640489781ec3f00d35568acf 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 270 9.0E-43 T 14-10-2018 AMBLS11_08595 11a72262640489781ec3f00d35568acf 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 242 2.7E-23 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AMBLS11_08595 11a72262640489781ec3f00d35568acf 276 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 14-10-2018 AMBLS11_08595 11a72262640489781ec3f00d35568acf 276 Gene3D G3DSA:3.40.50.1000 3 270 3.0E-47 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_08595 11a72262640489781ec3f00d35568acf 276 SUPERFAMILY SSF56784 3 274 2.36E-50 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_08595 11a72262640489781ec3f00d35568acf 276 Gene3D G3DSA:3.30.1240.10 82 201 3.0E-47 T 14-10-2018 AMBLS11_08685 10452470dbedcc097ca82f1a96abe032 155 Gene3D G3DSA:3.10.450.50 27 151 1.5E-7 T 14-10-2018 AMBLS11_08685 10452470dbedcc097ca82f1a96abe032 155 SUPERFAMILY SSF54427 50 153 2.24E-8 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_10635 bd7edb0d988399cb72c93e2978c2b761 330 Pfam PF13478 XdhC Rossmann domain 176 317 1.3E-21 T 14-10-2018 IPR027051 XdhC Rossmann domain AMBLS11_10635 bd7edb0d988399cb72c93e2978c2b761 330 Gene3D G3DSA:3.40.50.720 175 329 2.0E-28 T 14-10-2018 AMBLS11_10635 bd7edb0d988399cb72c93e2978c2b761 330 Pfam PF02625 XdhC and CoxI family 18 80 4.8E-14 T 14-10-2018 IPR003777 XdhC- CoxI AMBLS11_04515 083ed083db558e0cd9ca1be5ee2637ad 100 Pfam PF11743 Protein of unknown function (DUF3301) 7 97 4.0E-27 T 14-10-2018 IPR021732 Protein of unknown function DUF3301 AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 SUPERFAMILY SSF51735 1 145 7.74E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 PIRSF PIRSF000102 1 300 2.3E-63 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.6E-45 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 3.0E-131 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 Gene3D G3DSA:3.90.110.10 147 312 6.0E-53 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 Gene3D G3DSA:3.40.50.720 1 146 1.2E-63 T 14-10-2018 AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 SUPERFAMILY SSF56327 146 311 7.45E-42 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.2E-46 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AMBLS11_15970 f005766f48279599ff8ab73c42a8ec80 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 54.397 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMBLS11_04620 8014ec50196e88165d87802070c68ea3 190 SUPERFAMILY SSF53098 4 188 3.03E-69 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_04620 8014ec50196e88165d87802070c68ea3 190 Pfam PF01351 Ribonuclease HII 6 182 3.7E-40 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain AMBLS11_04620 8014ec50196e88165d87802070c68ea3 190 Gene3D G3DSA:3.30.420.10 1 190 2.2E-75 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_04620 8014ec50196e88165d87802070c68ea3 190 Hamap MF_00052_B Ribonuclease HII [rnhB]. 4 183 36.599 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 AMBLS11_17050 0400951493956dca44624597130b78ca 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.4E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal AMBLS11_17050 0400951493956dca44624597130b78ca 142 Gene3D G3DSA:1.10.10.2720 73 142 8.6E-30 T 14-10-2018 AMBLS11_17050 0400951493956dca44624597130b78ca 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.0E-26 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMBLS11_17050 0400951493956dca44624597130b78ca 142 SUPERFAMILY SSF54747 3 73 4.97E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMBLS11_17050 0400951493956dca44624597130b78ca 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 8.0E-15 T 14-10-2018 AMBLS11_17050 0400951493956dca44624597130b78ca 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 1.4E-66 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17050 0400951493956dca44624597130b78ca 142 SMART SM00649 9 141 1.5E-87 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMBLS11_17050 0400951493956dca44624597130b78ca 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_17050 0400951493956dca44624597130b78ca 142 Gene3D G3DSA:3.30.1550.10 2 72 2.9E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMBLS11_17050 0400951493956dca44624597130b78ca 142 SUPERFAMILY SSF46906 68 141 3.14E-27 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AMBLS11_17050 0400951493956dca44624597130b78ca 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.983 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMBLS11_04885 236ead57aa6ff0b4d1c470409d02d679 390 PIRSF PIRSF000390 1 388 5.1E-106 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMBLS11_04885 236ead57aa6ff0b4d1c470409d02d679 390 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 380 7.6E-110 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMBLS11_04885 236ead57aa6ff0b4d1c470409d02d679 390 SUPERFAMILY SSF53383 2 384 8.62E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_04885 236ead57aa6ff0b4d1c470409d02d679 390 Gene3D G3DSA:3.40.640.10 1 259 1.2E-92 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_04885 236ead57aa6ff0b4d1c470409d02d679 390 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 2 383 1.5E-165 T 14-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase AMBLS11_04885 236ead57aa6ff0b4d1c470409d02d679 390 Gene3D G3DSA:3.90.1150.10 260 387 1.1E-33 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_07360 f4699fee0d903a6c27b40f7cb862964f 254 SUPERFAMILY SSF48452 65 162 1.23E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_07360 f4699fee0d903a6c27b40f7cb862964f 254 Gene3D G3DSA:1.25.40.10 36 205 1.6E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 Gene3D G3DSA:2.30.42.10 237 324 4.2E-15 T 14-10-2018 AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 SMART SM00245 329 535 3.0E-59 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 241 322 6.6E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 538 671 2.0E-38 T 14-10-2018 IPR020992 Tail specific protease, C-terminal AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 SMART SM00228 248 325 1.8E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 202 555 2.6E-104 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 SUPERFAMILY SSF52096 170 539 7.12E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 SUPERFAMILY SSF50156 238 323 1.87E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 Pfam PF03572 Peptidase family S41 365 532 3.8E-51 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMBLS11_09335 04f84bcb62c885fc3c6a1ab4978ea542 680 Gene3D G3DSA:3.90.226.10 327 552 1.1E-56 T 14-10-2018 AMBLS11_10975 cdee82ecbc8821a6115657c591135619 294 Pfam PF11207 Protein of unknown function (DUF2989) 38 238 7.9E-61 T 14-10-2018 IPR021372 Protein of unknown function DUF2989 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 224 236 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 Pfam PF00813 FliP family 50 243 2.3E-80 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 176 191 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 50 247 1.0E-82 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 237 247 6.7E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 118 132 6.7E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 146 158 6.7E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 106 118 6.7E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 169 181 6.7E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 46 55 6.7E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 221 246 2.3E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 197 218 2.3E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 176 196 2.3E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 67 87 2.3E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 48 67 2.3E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMBLS11_05005 6868701ea61d1c3d2e065a715913e041 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 106 2.3E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMBLS11_13120 7790e95e2f05465a42e5440a676fc49e 326 SUPERFAMILY SSF88713 47 286 5.0E-28 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMBLS11_13120 7790e95e2f05465a42e5440a676fc49e 326 Pfam PF01522 Polysaccharide deacetylase 86 283 4.7E-24 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMBLS11_00950 c3ab0efb789846f5b2395118d7c79d21 858 SUPERFAMILY SSF51445 37 333 2.79E-36 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_00950 c3ab0efb789846f5b2395118d7c79d21 858 Gene3D G3DSA:3.20.20.80 38 363 2.9E-37 T 14-10-2018 AMBLS11_07250 a93b443aa4521075d08d7ed91c2577a7 422 PIRSF PIRSF000524 12 417 7.2E-104 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AMBLS11_07250 a93b443aa4521075d08d7ed91c2577a7 422 Gene3D G3DSA:3.90.1150.10 18 387 1.5E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_07250 a93b443aa4521075d08d7ed91c2577a7 422 Pfam PF00266 Aminotransferase class-V 44 220 1.6E-25 T 14-10-2018 IPR000192 Aminotransferase class V domain AMBLS11_07250 a93b443aa4521075d08d7ed91c2577a7 422 SUPERFAMILY SSF53383 7 392 8.16E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_07250 a93b443aa4521075d08d7ed91c2577a7 422 Gene3D G3DSA:3.40.640.10 29 290 1.5E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_14740 e2e78e67cbb2f8690851fdd37924a701 190 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 72 1.8E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_14740 e2e78e67cbb2f8690851fdd37924a701 190 SUPERFAMILY SSF47616 86 180 1.79E-7 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_14740 e2e78e67cbb2f8690851fdd37924a701 190 Gene3D G3DSA:1.20.1050.10 75 180 4.2E-27 T 14-10-2018 AMBLS11_14740 e2e78e67cbb2f8690851fdd37924a701 190 Gene3D G3DSA:3.40.30.10 3 74 4.2E-27 T 14-10-2018 AMBLS11_14740 e2e78e67cbb2f8690851fdd37924a701 190 SUPERFAMILY SSF52833 1 78 2.12E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_12145 35314e13743998e5d89b36ad52c79f17 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 210 2.6E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMBLS11_12145 35314e13743998e5d89b36ad52c79f17 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site AMBLS11_11925 025c5e53808422bf88c864fa264cfbf1 315 SUPERFAMILY SSF101898 37 287 4.18E-5 T 14-10-2018 AMBLS11_03750 97c2aa688ff8754a56274c8cf65b1524 392 Gene3D G3DSA:3.40.50.2300 150 282 2.2E-63 T 14-10-2018 AMBLS11_03750 97c2aa688ff8754a56274c8cf65b1524 392 Gene3D G3DSA:3.40.50.2300 31 355 2.2E-63 T 14-10-2018 AMBLS11_03750 97c2aa688ff8754a56274c8cf65b1524 392 SUPERFAMILY SSF53822 28 387 9.68E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_03750 97c2aa688ff8754a56274c8cf65b1524 392 Pfam PF13458 Periplasmic binding protein 31 373 1.8E-42 T 14-10-2018 IPR028081 Leucine-binding protein domain AMBLS11_15125 7cc17e0e39ca1b79904e872fb8a0dd2d 138 Pfam PF07876 Stress responsive A/B Barrel Domain 39 135 1.9E-17 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel AMBLS11_15125 7cc17e0e39ca1b79904e872fb8a0dd2d 138 SMART SM00886 39 137 4.7E-26 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel AMBLS11_15125 7cc17e0e39ca1b79904e872fb8a0dd2d 138 Gene3D G3DSA:3.30.70.100 36 138 7.0E-26 T 14-10-2018 AMBLS11_15125 7cc17e0e39ca1b79904e872fb8a0dd2d 138 SUPERFAMILY SSF54909 37 134 6.17E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 Gene3D G3DSA:1.10.230.10 222 320 1.5E-121 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 SUPERFAMILY SSF48256 9 365 3.66E-126 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 Gene3D G3DSA:1.10.580.10 30 353 1.5E-121 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 PIRSF PIRSF001369 1 374 1.7E-116 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 PRINTS PR00143 Citrate synthase signature 124 137 1.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 PRINTS PR00143 Citrate synthase signature 174 189 1.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 PRINTS PR00143 Citrate synthase signature 306 322 1.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 PRINTS PR00143 Citrate synthase signature 326 340 1.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 PRINTS PR00143 Citrate synthase signature 249 269 1.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 PRINTS PR00143 Citrate synthase signature 196 224 1.1E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 9 373 2.3E-157 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AMBLS11_14565 04bf3a73f7c5993c991c256fe0f87934 374 Pfam PF00285 Citrate synthase, C-terminal domain 9 355 2.1E-116 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMBLS11_12595 ebf4d903e2ced140c6d55c0b909752e6 130 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12595 ebf4d903e2ced140c6d55c0b909752e6 130 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 35 2.0E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12595 ebf4d903e2ced140c6d55c0b909752e6 130 Gene3D G3DSA:3.30.700.10 17 129 8.7E-6 T 14-10-2018 AMBLS11_12595 ebf4d903e2ced140c6d55c0b909752e6 130 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 4.4E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12595 ebf4d903e2ced140c6d55c0b909752e6 130 SUPERFAMILY SSF54523 17 119 1.8E-8 T 14-10-2018 AMBLS11_09600 d7896f0d3572f9397455f3641384520d 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 38.415 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 AMBLS11_09600 d7896f0d3572f9397455f3641384520d 165 SUPERFAMILY SSF52833 1 162 2.32E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_09600 d7896f0d3572f9397455f3641384520d 165 Gene3D G3DSA:3.40.30.10 1 165 3.3E-49 T 14-10-2018 AMBLS11_09600 d7896f0d3572f9397455f3641384520d 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 AMBLS11_09600 d7896f0d3572f9397455f3641384520d 165 Pfam PF08534 Redoxin 20 161 3.6E-29 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 372 7.7E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SMART SM00388 145 210 6.3E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SUPERFAMILY SSF52172 405 525 4.41E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Gene3D G3DSA:3.40.50.2300 574 692 6.2E-24 T 14-10-2018 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SUPERFAMILY SSF47384 136 210 3.92E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SUPERFAMILY SSF55874 199 372 3.14E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SMART SM00387 257 376 8.3E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Pfam PF00072 Response regulator receiver domain 7 109 6.5E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Pfam PF00072 Response regulator receiver domain 584 690 3.2E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Pfam PF00072 Response regulator receiver domain 406 518 1.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 209 3.8E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Gene3D G3DSA:1.10.287.130 138 211 7.6E-21 T 14-10-2018 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Gene3D G3DSA:3.40.50.2300 404 525 3.4E-32 T 14-10-2018 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SUPERFAMILY SSF52172 5 136 7.4E-22 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SMART SM00448 582 691 5.9E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SMART SM00448 5 120 2.2E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SMART SM00448 404 520 1.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 SUPERFAMILY SSF52172 582 691 9.25E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 329 5.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 315 5.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 373 5.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 354 5.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Gene3D G3DSA:3.30.565.10 212 375 4.2E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_10900 74cdabe07070d125303f2f58be1c3727 692 Gene3D G3DSA:3.40.50.2300 1 137 9.8E-21 T 14-10-2018 AMBLS11_15200 f1f5c655141229e50fec2952d029a018 310 Pfam PF03547 Membrane transport protein 166 299 1.9E-6 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AMBLS11_15200 f1f5c655141229e50fec2952d029a018 310 Gene3D G3DSA:1.20.1530.20 151 309 9.3E-9 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMBLS11_12635 5af0131b7dc38eb68652291f6018779a 286 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12635 5af0131b7dc38eb68652291f6018779a 286 Pfam PF16074 Type IV Pilus-assembly protein W 156 277 9.4E-19 T 14-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 AMBLS11_12635 5af0131b7dc38eb68652291f6018779a 286 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 31 4.7E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12635 5af0131b7dc38eb68652291f6018779a 286 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 3.2E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_06800 762813440e87dab2b4217a85e9925045 183 SUPERFAMILY SSF69118 1 182 1.15E-45 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMBLS11_06800 762813440e87dab2b4217a85e9925045 183 Gene3D G3DSA:1.20.1290.10 13 181 2.3E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMBLS11_00740 17f665231ab3e557c738dd1f531d4ab6 170 Gene3D G3DSA:3.10.129.10 5 170 2.3E-52 T 14-10-2018 AMBLS11_00740 17f665231ab3e557c738dd1f531d4ab6 170 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 37 168 5.8E-13 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMBLS11_00740 17f665231ab3e557c738dd1f531d4ab6 170 Pfam PF03061 Thioesterase superfamily 72 158 7.5E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMBLS11_00740 17f665231ab3e557c738dd1f531d4ab6 170 SUPERFAMILY SSF54637 20 168 6.05E-24 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_18435 33cab5e056bb2b52bbda330b5a7d13f8 342 SUPERFAMILY SSF75005 19 335 5.14E-58 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMBLS11_18435 33cab5e056bb2b52bbda330b5a7d13f8 342 Pfam PF04616 Glycosyl hydrolases family 43 84 329 3.9E-26 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMBLS11_18435 33cab5e056bb2b52bbda330b5a7d13f8 342 Gene3D G3DSA:2.115.10.20 3 336 2.7E-101 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 126 1.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 65 76 1.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 SUPERFAMILY SSF51735 2 236 3.38E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 235 2.9E-40 T 14-10-2018 AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.5E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.5E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.5E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 65 76 1.5E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 128 1.5E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 1.5E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04865 d03169f765367c28ca3c60ee4d48320b 237 Gene3D G3DSA:3.40.50.720 2 236 8.8E-58 T 14-10-2018 AMBLS11_07755 cbe85de7cb143388f102a431b687d0a3 156 Hamap MF_00042 Ribonuclease H [rnhA]. 3 151 36.688 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 AMBLS11_07755 cbe85de7cb143388f102a431b687d0a3 156 Gene3D G3DSA:3.30.420.10 2 153 1.0E-61 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_07755 cbe85de7cb143388f102a431b687d0a3 156 Pfam PF00075 RNase H 4 142 4.7E-53 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AMBLS11_07755 cbe85de7cb143388f102a431b687d0a3 156 SUPERFAMILY SSF53098 4 143 1.01E-59 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_01010 58fc414da80fb12273654c2bd0dbf9c8 158 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 5 150 1.1E-43 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AMBLS11_01010 58fc414da80fb12273654c2bd0dbf9c8 158 PIRSF PIRSF018472 1 158 9.0E-55 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AMBLS11_01010 58fc414da80fb12273654c2bd0dbf9c8 158 Pfam PF04093 rod shape-determining protein MreD 5 150 9.6E-32 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AMBLS11_17660 1989f64ebcec2523178217274dd2975d 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 156 1.6E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_17660 1989f64ebcec2523178217274dd2975d 165 Pfam PF08281 Sigma-70, region 4 102 153 6.9E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_17660 1989f64ebcec2523178217274dd2975d 165 SUPERFAMILY SSF88659 94 158 1.13E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_17660 1989f64ebcec2523178217274dd2975d 165 Pfam PF04542 Sigma-70 region 2 7 68 5.3E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_17660 1989f64ebcec2523178217274dd2975d 165 Gene3D G3DSA:1.20.140.160 1 156 1.7E-35 T 14-10-2018 AMBLS11_17660 1989f64ebcec2523178217274dd2975d 165 SUPERFAMILY SSF88946 7 80 6.67E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_07610 117b340a1107be90334d54416e828f6c 270 Pfam PF12697 Alpha/beta hydrolase family 10 256 5.7E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_07610 117b340a1107be90334d54416e828f6c 270 SUPERFAMILY SSF53474 10 260 1.86E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07610 117b340a1107be90334d54416e828f6c 270 Gene3D G3DSA:3.40.50.1820 1 267 9.4E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 SUPERFAMILY SSF53686 10 359 1.57E-97 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 Gene3D G3DSA:3.40.50.1100 56 155 1.3E-125 T 14-10-2018 AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 SUPERFAMILY SSF55021 334 421 2.75E-26 T 14-10-2018 AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 511 1.2E-225 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 511 1.4E-25 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 417 1.7E-25 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 33 314 6.6E-74 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 Gene3D G3DSA:3.40.50.1100 20 325 1.3E-125 T 14-10-2018 AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 Gene3D G3DSA:3.40.1020.10 336 513 2.1E-69 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMBLS11_18665 623c7f02f613dc0f0a71296de6cd969b 515 SUPERFAMILY SSF55021 418 511 8.01E-25 T 14-10-2018 AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 77 186 5.3E-22 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 191 85.188 T 14-10-2018 IPR017757 Transcriptional repressor BetI AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 SUPERFAMILY SSF48498 76 185 1.93E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.1E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 184 6.9E-64 T 14-10-2018 IPR017757 Transcriptional repressor BetI AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 Gene3D G3DSA:1.10.357.10 6 191 8.5E-34 T 14-10-2018 AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 SUPERFAMILY SSF46689 6 68 1.39E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_05150 b1f19eac5f2176427e101ef283106d62 191 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMBLS11_05795 9724fac558ad8ae18702c84c320a9468 198 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 38.308 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AMBLS11_05795 9724fac558ad8ae18702c84c320a9468 198 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 191 3.0E-82 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AMBLS11_05795 9724fac558ad8ae18702c84c320a9468 198 Pfam PF01583 Adenylylsulphate kinase 27 177 2.3E-74 T 14-10-2018 AMBLS11_05795 9724fac558ad8ae18702c84c320a9468 198 SUPERFAMILY SSF52540 24 195 4.46E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05795 9724fac558ad8ae18702c84c320a9468 198 Gene3D G3DSA:3.40.50.300 2 198 3.3E-81 T 14-10-2018 AMBLS11_14950 5921139b9dd6e9549cd873c0048cbad8 245 Pfam PF10099 Anti-sigma-K factor rskA 62 237 2.5E-21 T 14-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 AMBLS11_12585 431f46cadd4f3b634199382fd160c6d5 278 TIGRFAM TIGR00552 nadE: NAD+ synthetase 22 274 4.9E-68 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AMBLS11_12585 431f46cadd4f3b634199382fd160c6d5 278 SUPERFAMILY SSF52402 3 276 1.49E-80 T 14-10-2018 AMBLS11_12585 431f46cadd4f3b634199382fd160c6d5 278 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 274 45.674 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AMBLS11_12585 431f46cadd4f3b634199382fd160c6d5 278 Pfam PF02540 NAD synthase 22 268 3.6E-65 T 14-10-2018 IPR022310 NAD/GMP synthase AMBLS11_12585 431f46cadd4f3b634199382fd160c6d5 278 Gene3D G3DSA:3.40.50.620 1 276 9.8E-83 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_14045 970284b1058308d33d706e57841cdf6a 474 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 25 392 41.722 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_14045 970284b1058308d33d706e57841cdf6a 474 Pfam PF01098 Cell cycle protein 30 382 3.2E-110 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_14045 970284b1058308d33d706e57841cdf6a 474 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 341 365 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_14045 970284b1058308d33d706e57841cdf6a 474 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 28 382 2.5E-127 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 Gene3D G3DSA:1.10.1040.10 209 492 1.4E-114 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 2.0E-19 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 2.8E-27 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 7.6E-57 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 6.8E-117 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.449 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 Gene3D G3DSA:3.40.50.720 1 208 8.6E-83 T 14-10-2018 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 SUPERFAMILY SSF48179 348 487 1.36E-41 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 SUPERFAMILY SSF48179 210 367 1.09E-39 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_18690 2406ba5db23133b3a18ce380fb76caf7 492 SUPERFAMILY SSF51735 28 209 1.45E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_09220 883a5c3f95ceffddf3d28e64f1614a7d 294 SUPERFAMILY SSF46785 4 112 6.12E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_09220 883a5c3f95ceffddf3d28e64f1614a7d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_09220 883a5c3f95ceffddf3d28e64f1614a7d 294 Pfam PF03466 LysR substrate binding domain 92 292 1.0E-31 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_09220 883a5c3f95ceffddf3d28e64f1614a7d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.4E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_09220 883a5c3f95ceffddf3d28e64f1614a7d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.4E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_09220 883a5c3f95ceffddf3d28e64f1614a7d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.4E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_09220 883a5c3f95ceffddf3d28e64f1614a7d 294 Gene3D G3DSA:1.10.10.10 3 93 5.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_09220 883a5c3f95ceffddf3d28e64f1614a7d 294 Gene3D G3DSA:3.40.190.290 94 293 3.7E-35 T 14-10-2018 AMBLS11_09220 883a5c3f95ceffddf3d28e64f1614a7d 294 SUPERFAMILY SSF53850 92 293 3.88E-32 T 14-10-2018 AMBLS11_16185 5d9659dc1e10577730372da025545ad1 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 136 313 6.1E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_16185 5d9659dc1e10577730372da025545ad1 521 Gene3D G3DSA:1.10.287.950 51 365 1.2E-49 T 14-10-2018 AMBLS11_16185 5d9659dc1e10577730372da025545ad1 521 SMART SM00283 87 348 6.5E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_16185 5d9659dc1e10577730372da025545ad1 521 SUPERFAMILY SSF58104 93 349 1.57E-52 T 14-10-2018 AMBLS11_14005 6debc0ce7ca682d9454bca2d2ea66b30 292 Pfam PF01551 Peptidase family M23 190 285 6.2E-31 T 14-10-2018 IPR016047 Peptidase M23 AMBLS11_14005 6debc0ce7ca682d9454bca2d2ea66b30 292 Gene3D G3DSA:2.70.70.10 132 291 3.3E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_14005 6debc0ce7ca682d9454bca2d2ea66b30 292 SUPERFAMILY SSF51261 159 288 1.1E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 SUPERFAMILY SSF46689 14 97 2.82E-23 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 Gene3D G3DSA:1.10.10.60 1 97 2.8E-29 T 14-10-2018 AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 Pfam PF02954 Bacterial regulatory protein, Fis family 54 94 8.8E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 60 77 1.7E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 77 97 1.7E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 8 25 3.7E-16 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 41 56 3.7E-16 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 56 68 3.7E-16 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 25 41 3.7E-16 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMBLS11_18150 670d68b108d40b5017e90a6d49fa110d 97 PIRSF PIRSF002097 1 97 4.3E-39 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AMBLS11_16970 98651ab4941726a71b045156047f90ae 763 Pfam PF00593 TonB dependent receptor 276 762 7.7E-56 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_16970 98651ab4941726a71b045156047f90ae 763 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 163 7.4E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_16970 98651ab4941726a71b045156047f90ae 763 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 746 763 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site AMBLS11_16970 98651ab4941726a71b045156047f90ae 763 Gene3D G3DSA:2.170.130.10 23 168 3.2E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_16970 98651ab4941726a71b045156047f90ae 763 SUPERFAMILY SSF56935 33 763 1.01E-123 T 14-10-2018 AMBLS11_16970 98651ab4941726a71b045156047f90ae 763 Gene3D G3DSA:2.40.170.20 173 763 7.3E-179 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_07695 b9e79d3038518ae667caccc5ab0311c8 354 Gene3D G3DSA:3.60.20.30 220 354 6.1E-51 T 14-10-2018 AMBLS11_07695 b9e79d3038518ae667caccc5ab0311c8 354 SUPERFAMILY SSF56235 46 352 9.7E-94 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_07695 b9e79d3038518ae667caccc5ab0311c8 354 Pfam PF01112 Asparaginase 47 352 1.3E-114 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AMBLS11_11225 a6f1a5133e0a0467f3277fda58e22bdd 639 SUPERFAMILY SSF58104 330 637 9.42E-67 T 14-10-2018 AMBLS11_11225 a6f1a5133e0a0467f3277fda58e22bdd 639 SUPERFAMILY SSF103190 97 202 3.92E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMBLS11_11225 a6f1a5133e0a0467f3277fda58e22bdd 639 SMART SM00283 377 638 1.6E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_11225 a6f1a5133e0a0467f3277fda58e22bdd 639 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 443 605 3.6E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_11225 a6f1a5133e0a0467f3277fda58e22bdd 639 SMART SM00304 308 362 2.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_11225 a6f1a5133e0a0467f3277fda58e22bdd 639 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 533 1.1E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_11225 a6f1a5133e0a0467f3277fda58e22bdd 639 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 303 1.1E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_11225 a6f1a5133e0a0467f3277fda58e22bdd 639 Gene3D G3DSA:1.10.287.950 308 639 5.3E-66 T 14-10-2018 AMBLS11_11225 a6f1a5133e0a0467f3277fda58e22bdd 639 Pfam PF17201 Cache 3/Cache 2 fusion domain 30 246 3.0E-42 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain AMBLS11_15945 4d7520f2dbcbed58cba1a7156c5d8eb5 446 Pfam PF11973 NQRA C-terminal domain 261 309 1.3E-19 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AMBLS11_15945 4d7520f2dbcbed58cba1a7156c5d8eb5 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 1.5E-109 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AMBLS11_15945 4d7520f2dbcbed58cba1a7156c5d8eb5 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 8.7E-186 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AMBLS11_15945 4d7520f2dbcbed58cba1a7156c5d8eb5 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 45.095 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AMBLS11_01650 673cb0128cae3bee09b13f183140092e 384 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 148 236 3.8E-5 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMBLS11_01650 673cb0128cae3bee09b13f183140092e 384 Gene3D G3DSA:3.40.50.720 9 351 3.6E-116 T 14-10-2018 AMBLS11_01650 673cb0128cae3bee09b13f183140092e 384 SUPERFAMILY SSF51735 3 167 2.06E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_01650 673cb0128cae3bee09b13f183140092e 384 SUPERFAMILY SSF55347 142 316 5.23E-33 T 14-10-2018 AMBLS11_01650 673cb0128cae3bee09b13f183140092e 384 Gene3D G3DSA:3.30.360.10 141 375 3.6E-116 T 14-10-2018 AMBLS11_01650 673cb0128cae3bee09b13f183140092e 384 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 131 1.2E-15 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMBLS11_03700 b5281e4775d2ff269a2ef93e5eae53c9 292 SMART SM00460 177 247 2.8E-20 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_03700 b5281e4775d2ff269a2ef93e5eae53c9 292 Gene3D G3DSA:3.10.620.30 93 282 2.1E-44 T 14-10-2018 AMBLS11_03700 b5281e4775d2ff269a2ef93e5eae53c9 292 SUPERFAMILY SSF54001 7 287 2.4E-39 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMBLS11_03700 b5281e4775d2ff269a2ef93e5eae53c9 292 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 82 2.3E-19 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal AMBLS11_03700 b5281e4775d2ff269a2ef93e5eae53c9 292 Pfam PF01841 Transglutaminase-like superfamily 148 245 5.4E-19 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_02280 4f30f8a991d6a7048669f9fc834ccc30 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 9.0E-21 T 14-10-2018 AMBLS11_02280 4f30f8a991d6a7048669f9fc834ccc30 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 9.0E-21 T 14-10-2018 AMBLS11_02280 4f30f8a991d6a7048669f9fc834ccc30 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 9.0E-21 T 14-10-2018 AMBLS11_02280 4f30f8a991d6a7048669f9fc834ccc30 99 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.5E-26 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AMBLS11_02280 4f30f8a991d6a7048669f9fc834ccc30 99 Pfam PF02416 mttA/Hcf106 family 4 49 9.9E-8 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMBLS11_16505 0d6e1d0bed8c30b709df86b9f5163910 231 SUPERFAMILY SSF52343 102 229 2.62E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_16505 0d6e1d0bed8c30b709df86b9f5163910 231 Pfam PF00175 Oxidoreductase NAD-binding domain 107 210 3.9E-22 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMBLS11_16505 0d6e1d0bed8c30b709df86b9f5163910 231 SUPERFAMILY SSF63380 4 97 3.05E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_16505 0d6e1d0bed8c30b709df86b9f5163910 231 Gene3D G3DSA:2.40.30.10 2 98 1.2E-20 T 14-10-2018 AMBLS11_16505 0d6e1d0bed8c30b709df86b9f5163910 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 131 140 9.8E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_16505 0d6e1d0bed8c30b709df86b9f5163910 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 9.8E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_16505 0d6e1d0bed8c30b709df86b9f5163910 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 9.8E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_16505 0d6e1d0bed8c30b709df86b9f5163910 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 106 125 9.8E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_16505 0d6e1d0bed8c30b709df86b9f5163910 231 Gene3D G3DSA:3.40.50.80 101 231 4.1E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_04530 221286c3c31fba7447d5715fb7d3482a 282 Pfam PF00849 RNA pseudouridylate synthase 53 211 4.8E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_04530 221286c3c31fba7447d5715fb7d3482a 282 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 93 107 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_04530 221286c3c31fba7447d5715fb7d3482a 282 SUPERFAMILY SSF55120 41 277 1.36E-56 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_04530 221286c3c31fba7447d5715fb7d3482a 282 Gene3D G3DSA:3.30.2350.10 46 279 3.7E-56 T 14-10-2018 AMBLS11_00645 76c4e6893247661cfd9069006a70258d 118 Pfam PF00893 Small Multidrug Resistance protein 15 107 3.6E-23 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AMBLS11_00645 76c4e6893247661cfd9069006a70258d 118 SUPERFAMILY SSF103481 17 116 2.88E-17 T 14-10-2018 AMBLS11_00645 76c4e6893247661cfd9069006a70258d 118 Gene3D G3DSA:1.10.3730.20 14 118 1.2E-26 T 14-10-2018 AMBLS11_04765 79e70ba205894603c7cc5d9d0936a707 695 SUPERFAMILY SSF64518 111 447 1.96E-10 T 14-10-2018 AMBLS11_04765 79e70ba205894603c7cc5d9d0936a707 695 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 338 3.3E-51 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMBLS11_04765 79e70ba205894603c7cc5d9d0936a707 695 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 637 692 7.3E-10 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMBLS11_04765 79e70ba205894603c7cc5d9d0936a707 695 SUPERFAMILY SSF64518 428 692 5.49E-20 T 14-10-2018 AMBLS11_04765 79e70ba205894603c7cc5d9d0936a707 695 PRINTS PR01005 Flagellar hook-associated protein signature 430 447 5.2E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMBLS11_04765 79e70ba205894603c7cc5d9d0936a707 695 PRINTS PR01005 Flagellar hook-associated protein signature 228 246 5.2E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMBLS11_04765 79e70ba205894603c7cc5d9d0936a707 695 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 5.2E-5 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMBLS11_04765 79e70ba205894603c7cc5d9d0936a707 695 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMBLS11_04765 79e70ba205894603c7cc5d9d0936a707 695 Pfam PF00460 Flagella basal body rod protein 10 36 1.2E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMBLS11_03890 1395d94b76c4c2358d9e9f151c4b119d 176 Pfam PF08281 Sigma-70, region 4 119 171 1.5E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_03890 1395d94b76c4c2358d9e9f151c4b119d 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 175 3.3E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_03890 1395d94b76c4c2358d9e9f151c4b119d 176 Gene3D G3DSA:1.10.10.10 105 176 3.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03890 1395d94b76c4c2358d9e9f151c4b119d 176 Pfam PF04542 Sigma-70 region 2 24 90 1.8E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03890 1395d94b76c4c2358d9e9f151c4b119d 176 SUPERFAMILY SSF88946 5 101 4.08E-25 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_03890 1395d94b76c4c2358d9e9f151c4b119d 176 Gene3D G3DSA:1.10.1740.10 3 104 1.2E-28 T 14-10-2018 AMBLS11_03890 1395d94b76c4c2358d9e9f151c4b119d 176 SUPERFAMILY SSF88659 109 174 1.48E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_12720 f97a4d377f02414ab274abe0f2fa834b 630 SUPERFAMILY SSF109998 41 243 3.83E-36 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMBLS11_12720 f97a4d377f02414ab274abe0f2fa834b 630 Pfam PF13616 PPIC-type PPIASE domain 267 368 2.9E-30 T 14-10-2018 AMBLS11_12720 f97a4d377f02414ab274abe0f2fa834b 630 SUPERFAMILY SSF54534 266 369 2.35E-29 T 14-10-2018 AMBLS11_12720 f97a4d377f02414ab274abe0f2fa834b 630 Gene3D G3DSA:3.10.50.40 264 388 7.2E-37 T 14-10-2018 AMBLS11_12720 f97a4d377f02414ab274abe0f2fa834b 630 Gene3D G3DSA:1.10.4030.30 40 203 5.4E-19 T 14-10-2018 AMBLS11_12720 f97a4d377f02414ab274abe0f2fa834b 630 Pfam PF13624 SurA N-terminal domain 1 165 4.0E-48 T 14-10-2018 AMBLS11_14980 d74fd6756f0b197f6eb121db3b2d37e7 198 Gene3D G3DSA:3.40.50.360 2 198 6.3E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_14980 d74fd6756f0b197f6eb121db3b2d37e7 198 Pfam PF02525 Flavodoxin-like fold 8 195 9.4E-30 T 14-10-2018 IPR003680 Flavodoxin-like fold AMBLS11_14980 d74fd6756f0b197f6eb121db3b2d37e7 198 SUPERFAMILY SSF52218 8 198 1.87E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_07415 635452812ad87a473caac233818e16bf 327 Gene3D G3DSA:3.40.50.2000 140 267 1.6E-5 T 14-10-2018 AMBLS11_07415 635452812ad87a473caac233818e16bf 327 SUPERFAMILY SSF53756 79 241 2.45E-6 T 14-10-2018 AMBLS11_08380 a5a9871284af35277bbe9977683d6af9 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.1E-39 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMBLS11_08380 a5a9871284af35277bbe9977683d6af9 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.472 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMBLS11_08380 a5a9871284af35277bbe9977683d6af9 72 Gene3D G3DSA:2.40.50.140 1 72 7.2E-38 T 14-10-2018 AMBLS11_08380 a5a9871284af35277bbe9977683d6af9 72 SMART SM00316 4 72 7.8E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMBLS11_08380 a5a9871284af35277bbe9977683d6af9 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.0E-28 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AMBLS11_08380 a5a9871284af35277bbe9977683d6af9 72 SUPERFAMILY SSF50249 1 70 2.94E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_03290 d75413caef2798b245bc0cf1447d4739 404 Gene3D G3DSA:2.120.10.30 50 402 6.5E-71 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_03290 d75413caef2798b245bc0cf1447d4739 404 Pfam PF07995 Glucose / Sorbosone dehydrogenase 82 397 1.6E-80 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMBLS11_03290 d75413caef2798b245bc0cf1447d4739 404 SUPERFAMILY SSF50952 77 402 2.88E-24 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.2E-13 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.106 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 Gene3D G3DSA:3.40.50.300 94 382 2.5E-130 T 14-10-2018 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 Gene3D G3DSA:1.20.150.20 383 513 6.0E-47 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 9.3E-254 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 Gene3D G3DSA:2.40.30.20 1 93 3.3E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 SUPERFAMILY SSF52540 96 381 1.95E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.4E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.2E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 SUPERFAMILY SSF47917 383 511 1.07E-45 T 14-10-2018 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 SUPERFAMILY SSF50615 10 94 4.32E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_18940 b39183d771959d3eef584c6b4b96fad3 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMBLS11_15230 a5d6ff3d6c2df5b4e456a0176f988853 240 SMART SM00382 26 217 2.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_15230 a5d6ff3d6c2df5b4e456a0176f988853 240 Pfam PF00005 ABC transporter 18 160 3.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_15230 a5d6ff3d6c2df5b4e456a0176f988853 240 Gene3D G3DSA:3.40.50.300 1 239 1.4E-61 T 14-10-2018 AMBLS11_15230 a5d6ff3d6c2df5b4e456a0176f988853 240 SUPERFAMILY SSF52540 3 224 1.07E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_15230 a5d6ff3d6c2df5b4e456a0176f988853 240 TIGRFAM TIGR03864 PQQ_ABC_ATP: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system 3 234 1.3E-91 T 14-10-2018 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 SUPERFAMILY SSF52540 159 545 1.12E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 SUPERFAMILY SSF52540 546 852 5.58E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 1.2E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Gene3D G3DSA:3.40.50.300 348 544 4.1E-66 T 14-10-2018 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 SMART SM01086 766 855 2.2E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 SUPERFAMILY SSF81923 4 156 3.79E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Gene3D G3DSA:1.10.8.60 766 857 3.6E-27 T 14-10-2018 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 SMART SM00382 198 343 7.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 SMART SM00382 597 736 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.0E-56 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Gene3D G3DSA:3.40.50.300 550 764 2.6E-90 T 14-10-2018 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 1.4E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Gene3D G3DSA:1.10.1780.10 1 148 2.2E-31 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Gene3D G3DSA:3.40.50.300 158 347 1.7E-74 T 14-10-2018 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.5E-11 T 14-10-2018 IPR004176 Clp, N-terminal AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.0E-13 T 14-10-2018 IPR004176 Clp, N-terminal AMBLS11_12080 2968a266a41aba81be225710d775b4f3 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 AMBLS11_11385 f03fc4689bedf77443527f9d809ca949 301 SUPERFAMILY SSF46785 4 112 1.85E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_11385 f03fc4689bedf77443527f9d809ca949 301 Pfam PF03466 LysR substrate binding domain 88 293 5.0E-40 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_11385 f03fc4689bedf77443527f9d809ca949 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11385 f03fc4689bedf77443527f9d809ca949 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11385 f03fc4689bedf77443527f9d809ca949 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11385 f03fc4689bedf77443527f9d809ca949 301 Gene3D G3DSA:1.10.10.10 3 89 2.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11385 f03fc4689bedf77443527f9d809ca949 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 7.1E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11385 f03fc4689bedf77443527f9d809ca949 301 SUPERFAMILY SSF53850 90 296 3.57E-42 T 14-10-2018 AMBLS11_11385 f03fc4689bedf77443527f9d809ca949 301 Gene3D G3DSA:3.40.190.290 91 294 2.1E-61 T 14-10-2018 AMBLS11_16015 3ccb41da985765ad00e7e06d8f9753d7 385 Pfam PF14559 Tetratricopeptide repeat 313 381 5.2E-9 T 14-10-2018 AMBLS11_16015 3ccb41da985765ad00e7e06d8f9753d7 385 Pfam PF13432 Tetratricopeptide repeat 206 261 0.0011 T 14-10-2018 AMBLS11_16015 3ccb41da985765ad00e7e06d8f9753d7 385 SMART SM00028 234 267 0.0034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16015 3ccb41da985765ad00e7e06d8f9753d7 385 SMART SM00028 200 233 32.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16015 3ccb41da985765ad00e7e06d8f9753d7 385 SMART SM00028 302 335 0.091 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16015 3ccb41da985765ad00e7e06d8f9753d7 385 SMART SM00028 336 369 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16015 3ccb41da985765ad00e7e06d8f9753d7 385 Gene3D G3DSA:1.25.40.10 188 293 1.6E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16015 3ccb41da985765ad00e7e06d8f9753d7 385 Gene3D G3DSA:1.25.40.10 294 384 8.6E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16015 3ccb41da985765ad00e7e06d8f9753d7 385 SUPERFAMILY SSF48452 200 368 3.32E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 333 352 1.5E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 122 134 1.5E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 239 252 1.5E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 1.5E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 539 552 1.5E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 277 290 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 Gene3D G3DSA:2.40.37.10 13 561 1.4E-222 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 SUPERFAMILY SSF51419 67 346 2.99E-64 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 90 343 7.3E-44 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 635 4.4E-217 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 Gene3D G3DSA:3.20.20.10 67 348 1.4E-222 T 14-10-2018 IPR029066 PLP-binding barrel AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01180 Arginine decarboxylase signature 323 340 4.0E-62 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01180 Arginine decarboxylase signature 539 560 4.0E-62 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01180 Arginine decarboxylase signature 486 511 4.0E-62 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01180 Arginine decarboxylase signature 90 104 4.0E-62 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01180 Arginine decarboxylase signature 66 81 4.0E-62 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01180 Arginine decarboxylase signature 146 161 4.0E-62 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01180 Arginine decarboxylase signature 196 218 4.0E-62 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01180 Arginine decarboxylase signature 461 482 4.0E-62 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PRINTS PR01180 Arginine decarboxylase signature 172 193 4.0E-62 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 PIRSF PIRSF001336 1 636 9.1E-248 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 Gene3D G3DSA:1.20.58.930 366 457 1.4E-222 T 14-10-2018 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 SUPERFAMILY SSF50621 457 562 9.94E-8 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMBLS11_17820 1f0f2ad5d5886fa6479de787ed172d0d 636 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 98 116 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMBLS11_03085 6d76dd684563473a8c050a1616ab563e 181 Pfam PF00293 NUDIX domain 51 117 3.0E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMBLS11_03085 6d76dd684563473a8c050a1616ab563e 181 Gene3D G3DSA:3.90.79.10 36 163 2.4E-18 T 14-10-2018 AMBLS11_03085 6d76dd684563473a8c050a1616ab563e 181 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMBLS11_03085 6d76dd684563473a8c050a1616ab563e 181 SUPERFAMILY SSF55811 47 114 2.98E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_03675 9ea56adbcefff27759f8370cabf6297b 365 Pfam PF03969 AFG1-like ATPase 1 361 5.2E-146 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 AMBLS11_03675 9ea56adbcefff27759f8370cabf6297b 365 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 365 54.128 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AMBLS11_03675 9ea56adbcefff27759f8370cabf6297b 365 Gene3D G3DSA:3.40.50.300 5 191 1.3E-19 T 14-10-2018 AMBLS11_03675 9ea56adbcefff27759f8370cabf6297b 365 SUPERFAMILY SSF52540 60 228 6.35E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 Gene3D G3DSA:3.30.9.10 89 326 5.2E-137 T 14-10-2018 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 SUPERFAMILY SSF54373 232 325 1.06E-8 T 14-10-2018 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 Gene3D G3DSA:1.10.8.870 398 466 2.4E-23 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 Pfam PF01266 FAD dependent oxidoreductase 12 328 2.3E-53 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 387 490 9.2E-12 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 Gene3D G3DSA:3.50.50.60 12 372 5.2E-137 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 358 368 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 11 23 1.1E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 85 97 1.1E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 1.1E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 353 365 1.1E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 24 34 1.1E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 52 1.1E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 16 33 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMBLS11_00980 bd97adabac932a75e1a2035aaa0df06b 515 SUPERFAMILY SSF51905 9 377 6.15E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_14260 6de83c93217be7d89bad68710317a0d6 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 198 5.5E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMBLS11_14260 6de83c93217be7d89bad68710317a0d6 213 Gene3D G3DSA:1.20.1050.10 82 197 2.0E-47 T 14-10-2018 AMBLS11_14260 6de83c93217be7d89bad68710317a0d6 213 SUPERFAMILY SSF47616 80 205 7.66E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_14260 6de83c93217be7d89bad68710317a0d6 213 SUPERFAMILY SSF52833 1 84 6.9E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_14260 6de83c93217be7d89bad68710317a0d6 213 Gene3D G3DSA:3.40.30.10 4 200 2.0E-47 T 14-10-2018 AMBLS11_14260 6de83c93217be7d89bad68710317a0d6 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 4.4E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 354 9.0E-147 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 Gene3D G3DSA:3.30.1360.120 7 231 3.6E-89 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 Gene3D G3DSA:4.10.1250.10 232 276 5.3E-28 T 14-10-2018 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 SUPERFAMILY SSF101790 273 356 2.62E-25 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 Gene3D G3DSA:2.40.30.110 277 359 1.5E-32 T 14-10-2018 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 354 45.108 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 Gene3D G3DSA:3.30.70.1400 51 138 3.6E-89 T 14-10-2018 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 SUPERFAMILY SSF103025 4 277 2.83E-93 T 14-10-2018 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 349 6.6E-21 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 PIRSF PIRSF006487 1 358 7.6E-88 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMBLS11_13750 3eead14e9cfd201226bcc22564f8364d 359 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 1.5E-89 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMBLS11_07440 a032aaf9306fab5393349fe882dbc805 328 Pfam PF00685 Sulfotransferase domain 35 273 3.0E-13 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 AMBLS11_07440 a032aaf9306fab5393349fe882dbc805 328 Gene3D G3DSA:3.40.50.300 4 302 6.3E-18 T 14-10-2018 AMBLS11_07440 a032aaf9306fab5393349fe882dbc805 328 SUPERFAMILY SSF52540 33 299 5.31E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04345 958a2c1361c416e8f875033b67430a3c 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 3.1E-58 T 14-10-2018 AMBLS11_04345 958a2c1361c416e8f875033b67430a3c 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 3.1E-58 T 14-10-2018 AMBLS11_04345 958a2c1361c416e8f875033b67430a3c 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 3.1E-58 T 14-10-2018 AMBLS11_04345 958a2c1361c416e8f875033b67430a3c 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 3.1E-58 T 14-10-2018 AMBLS11_04345 958a2c1361c416e8f875033b67430a3c 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 133 156 3.1E-58 T 14-10-2018 AMBLS11_04345 958a2c1361c416e8f875033b67430a3c 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 3.1E-58 T 14-10-2018 AMBLS11_04345 958a2c1361c416e8f875033b67430a3c 221 Pfam PF03379 CcmB protein 7 218 8.9E-76 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04345 958a2c1361c416e8f875033b67430a3c 221 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 7 217 1.2E-76 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMBLS11_04345 958a2c1361c416e8f875033b67430a3c 221 PIRSF PIRSF002764 1 221 1.8E-74 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMBLS11_01340 9cec08c7e3798dffde24a39db66a2e2b 149 Pfam PF02769 AIR synthase related protein, C-terminal domain 23 125 1.8E-10 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMBLS11_01340 9cec08c7e3798dffde24a39db66a2e2b 149 SUPERFAMILY SSF56042 5 143 7.92E-24 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_01340 9cec08c7e3798dffde24a39db66a2e2b 149 Gene3D G3DSA:3.90.650.10 1 149 4.5E-34 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMBLS11_02355 da8df695edea6ef7123a6342c52715eb 177 SUPERFAMILY SSF110087 40 170 2.48E-42 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily AMBLS11_02355 da8df695edea6ef7123a6342c52715eb 177 Gene3D G3DSA:2.60.40.1890 53 171 2.3E-36 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily AMBLS11_02355 da8df695edea6ef7123a6342c52715eb 177 Pfam PF04314 Copper chaperone PCu(A)C 51 161 2.3E-33 T 14-10-2018 IPR007410 Copper chaperone PCuAC AMBLS11_07480 76e81ef36ec75938327f71127cd4fb8a 638 Pfam PF01757 Acyltransferase family 4 315 2.8E-31 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMBLS11_06460 b9af79943b0283c798bfb99709c662e8 218 Gene3D G3DSA:3.40.50.1110 34 216 5.8E-63 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMBLS11_06460 b9af79943b0283c798bfb99709c662e8 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 40 198 7.4E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMBLS11_06460 b9af79943b0283c798bfb99709c662e8 218 SUPERFAMILY SSF52266 37 213 1.15E-45 T 14-10-2018 AMBLS11_16745 4b6e4d80e77e7ccd6f2c215df53475d3 325 Gene3D G3DSA:3.40.50.1820 1 317 1.6E-81 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_16745 4b6e4d80e77e7ccd6f2c215df53475d3 325 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 8.2E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMBLS11_16745 4b6e4d80e77e7ccd6f2c215df53475d3 325 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 8.2E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMBLS11_16745 4b6e4d80e77e7ccd6f2c215df53475d3 325 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 8.2E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMBLS11_16745 4b6e4d80e77e7ccd6f2c215df53475d3 325 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 316 8.8E-99 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMBLS11_16745 4b6e4d80e77e7ccd6f2c215df53475d3 325 SUPERFAMILY SSF53474 3 300 5.36E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_16745 4b6e4d80e77e7ccd6f2c215df53475d3 325 Pfam PF00561 alpha/beta hydrolase fold 36 299 9.0E-28 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_16745 4b6e4d80e77e7ccd6f2c215df53475d3 325 PIRSF PIRSF006431 1 320 8.9E-108 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMBLS11_07920 cd57a4e937f050aafd9d5b6549aa9574 224 Hamap MF_00165 Thymidylate kinase [tmk]. 4 204 26.714 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMBLS11_07920 cd57a4e937f050aafd9d5b6549aa9574 224 Gene3D G3DSA:3.40.50.300 1 208 7.5E-63 T 14-10-2018 AMBLS11_07920 cd57a4e937f050aafd9d5b6549aa9574 224 Pfam PF02223 Thymidylate kinase 8 196 4.3E-51 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMBLS11_07920 cd57a4e937f050aafd9d5b6549aa9574 224 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMBLS11_07920 cd57a4e937f050aafd9d5b6549aa9574 224 SUPERFAMILY SSF52540 1 207 2.42E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_07920 cd57a4e937f050aafd9d5b6549aa9574 224 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 196 5.4E-59 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMBLS11_11090 ea81bcf81a7911298d4d86f49c4731cc 327 SUPERFAMILY SSF53448 4 257 4.08E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_11090 ea81bcf81a7911298d4d86f49c4731cc 327 Pfam PF02709 N-terminal domain of galactosyltransferase 164 226 5.0E-10 T 14-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 AMBLS11_11090 ea81bcf81a7911298d4d86f49c4731cc 327 Gene3D G3DSA:3.90.550.10 1 230 8.4E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_18735 8f7a8a546523a7df0f980053ee168a61 335 SUPERFAMILY SSF51735 121 305 1.15E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_18735 8f7a8a546523a7df0f980053ee168a61 335 Gene3D G3DSA:3.40.50.720 45 327 1.2E-100 T 14-10-2018 AMBLS11_18735 8f7a8a546523a7df0f980053ee168a61 335 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 42 321 7.0E-21 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMBLS11_18735 8f7a8a546523a7df0f980053ee168a61 335 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 241 257 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMBLS11_18735 8f7a8a546523a7df0f980053ee168a61 335 SUPERFAMILY SSF52283 31 141 4.89E-26 T 14-10-2018 AMBLS11_18735 8f7a8a546523a7df0f980053ee168a61 335 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 128 304 2.4E-50 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMBLS11_18735 8f7a8a546523a7df0f980053ee168a61 335 Gene3D G3DSA:3.40.50.720 117 303 1.2E-100 T 14-10-2018 AMBLS11_08260 1676e2e282a7ee0b1df60e85fd3f51b7 115 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 25.914 T 14-10-2018 IPR005346 RnfH protein AMBLS11_08260 1676e2e282a7ee0b1df60e85fd3f51b7 115 SUPERFAMILY SSF54285 5 80 5.89E-27 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMBLS11_08260 1676e2e282a7ee0b1df60e85fd3f51b7 115 Pfam PF03658 RnfH family Ubiquitin 6 88 2.3E-35 T 14-10-2018 IPR005346 RnfH protein AMBLS11_08260 1676e2e282a7ee0b1df60e85fd3f51b7 115 Gene3D G3DSA:3.10.20.280 1 90 3.6E-34 T 14-10-2018 IPR037021 RnfH superfamily AMBLS11_09115 8dd1ef42a1c834f09db876fb81a67414 227 SUPERFAMILY SSF141371 131 222 4.32E-9 T 14-10-2018 AMBLS11_09115 8dd1ef42a1c834f09db876fb81a67414 227 Pfam PF12945 Flagellar protein YcgR 23 112 1.7E-10 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AMBLS11_09115 8dd1ef42a1c834f09db876fb81a67414 227 SUPERFAMILY SSF141371 14 121 2.31E-23 T 14-10-2018 AMBLS11_09115 8dd1ef42a1c834f09db876fb81a67414 227 Pfam PF07238 PilZ domain 125 214 3.7E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 AMBLS11_09115 8dd1ef42a1c834f09db876fb81a67414 227 Gene3D G3DSA:2.30.110.10 8 121 5.9E-16 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMBLS11_09115 8dd1ef42a1c834f09db876fb81a67414 227 Gene3D G3DSA:2.40.10.220 129 224 3.7E-6 T 14-10-2018 AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 35 563 1.3E-75 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 PIRSF PIRSF004862 14 564 5.8E-130 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 Pfam PF01514 Secretory protein of YscJ/FliF family 47 234 2.1E-51 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 Gene3D G3DSA:3.30.300.30 136 235 2.2E-7 T 14-10-2018 AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 PRINTS PR01009 Flagellar M-ring protein signature 135 153 1.1E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 PRINTS PR01009 Flagellar M-ring protein signature 280 298 1.1E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 PRINTS PR01009 Flagellar M-ring protein signature 358 382 1.1E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 PRINTS PR01009 Flagellar M-ring protein signature 210 228 1.1E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 PRINTS PR01009 Flagellar M-ring protein signature 167 181 1.1E-23 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMBLS11_04955 3a959faefbaa0c960e66a48c8ff7643a 564 Pfam PF08345 Flagellar M-ring protein C-terminal 267 434 1.5E-43 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal AMBLS11_03380 c270c0d4e0cde5dfa070f05e4ee54005 308 SUPERFAMILY SSF56349 20 298 7.06E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_03380 c270c0d4e0cde5dfa070f05e4ee54005 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 101 1.6E-21 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMBLS11_03380 c270c0d4e0cde5dfa070f05e4ee54005 308 Gene3D G3DSA:1.10.150.130 15 111 1.5E-20 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_03380 c270c0d4e0cde5dfa070f05e4ee54005 308 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 15 308 57.933 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AMBLS11_03380 c270c0d4e0cde5dfa070f05e4ee54005 308 Pfam PF00589 Phage integrase family 125 294 3.0E-57 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_03380 c270c0d4e0cde5dfa070f05e4ee54005 308 Gene3D G3DSA:1.10.443.10 123 301 2.1E-72 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_03380 c270c0d4e0cde5dfa070f05e4ee54005 308 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 21 307 4.8E-116 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AMBLS11_03380 c270c0d4e0cde5dfa070f05e4ee54005 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 17 308 56.225 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AMBLS11_08420 e5e5ab89c7acd7acc751241f55984118 183 Pfam PF00881 Nitroreductase family 9 161 8.1E-21 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMBLS11_08420 e5e5ab89c7acd7acc751241f55984118 183 Gene3D G3DSA:3.40.109.10 1 181 2.1E-38 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMBLS11_08420 e5e5ab89c7acd7acc751241f55984118 183 SUPERFAMILY SSF55469 1 181 1.01E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMBLS11_08420 e5e5ab89c7acd7acc751241f55984118 183 PIRSF PIRSF000232 1 183 4.3E-58 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AMBLS11_10705 7e38005d3926ecd7cad2d1d3b62cdc8d 815 SUPERFAMILY SSF55486 290 493 4.05E-24 T 14-10-2018 AMBLS11_10705 7e38005d3926ecd7cad2d1d3b62cdc8d 815 Pfam PF16313 Met-zincin 416 730 3.3E-62 T 14-10-2018 IPR032534 Domain of unknown function DUF4953 AMBLS11_10705 7e38005d3926ecd7cad2d1d3b62cdc8d 815 Gene3D G3DSA:3.40.390.10 358 492 1.9E-7 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMBLS11_10705 7e38005d3926ecd7cad2d1d3b62cdc8d 815 Pfam PF17148 Domain of unknown function (DUF5117) 98 290 1.6E-35 T 14-10-2018 IPR033413 Domain of unknown function DUF5117 AMBLS11_01615 8d6ba7ec2034fd7620b571c6e879b1fc 297 SUPERFAMILY SSF103481 185 293 1.44E-8 T 14-10-2018 AMBLS11_01615 8d6ba7ec2034fd7620b571c6e879b1fc 297 Pfam PF00892 EamA-like transporter family 1 132 9.6E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_01615 8d6ba7ec2034fd7620b571c6e879b1fc 297 Pfam PF00892 EamA-like transporter family 148 290 4.6E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_01615 8d6ba7ec2034fd7620b571c6e879b1fc 297 SUPERFAMILY SSF103481 40 137 3.66E-14 T 14-10-2018 AMBLS11_12485 d29285369ca69f79fdb488bf9a59bbad 228 SMART SM00530 13 68 2.5E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_12485 d29285369ca69f79fdb488bf9a59bbad 228 SUPERFAMILY SSF47413 9 74 3.99E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_12485 d29285369ca69f79fdb488bf9a59bbad 228 Gene3D G3DSA:1.10.260.40 7 72 1.3E-13 T 14-10-2018 AMBLS11_12485 d29285369ca69f79fdb488bf9a59bbad 228 SUPERFAMILY SSF51306 124 223 1.4E-6 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMBLS11_12485 d29285369ca69f79fdb488bf9a59bbad 228 Pfam PF01381 Helix-turn-helix 20 68 1.7E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_11610 2b7af2c92b3931e549d74aa409d390f6 119 Pfam PF08888 HopJ type III effector protein 7 114 4.6E-45 T 14-10-2018 IPR014984 HopJ type III effector protein AMBLS11_11610 2b7af2c92b3931e549d74aa409d390f6 119 Gene3D G3DSA:3.20.160.10 1 117 4.1E-46 T 14-10-2018 IPR038604 Type III effector HopJ superfamily AMBLS11_09470 e6376df2c473c4f182137499094a44b1 118 Gene3D G3DSA:1.10.3830.10 3 118 6.8E-37 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AMBLS11_09470 e6376df2c473c4f182137499094a44b1 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 1.0E-32 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AMBLS11_10960 753397639ee65087dca85426ee835e26 552 Pfam PF01235 Sodium:alanine symporter family 56 551 6.8E-142 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_10960 753397639ee65087dca85426ee835e26 552 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_10960 753397639ee65087dca85426ee835e26 552 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 546 6.9E-179 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_10960 753397639ee65087dca85426ee835e26 552 PRINTS PR00175 Sodium/alanine symporter signature 93 115 2.8E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_10960 753397639ee65087dca85426ee835e26 552 PRINTS PR00175 Sodium/alanine symporter signature 456 478 2.8E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_10960 753397639ee65087dca85426ee835e26 552 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.8E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_10960 753397639ee65087dca85426ee835e26 552 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.8E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_10960 753397639ee65087dca85426ee835e26 552 PRINTS PR00175 Sodium/alanine symporter signature 307 325 2.8E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_10960 753397639ee65087dca85426ee835e26 552 PRINTS PR00175 Sodium/alanine symporter signature 515 535 2.8E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.379 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.4E-175 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 Gene3D G3DSA:3.30.1490.20 21 104 2.9E-93 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 SUPERFAMILY SSF56059 1 238 1.67E-80 T 14-10-2018 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 SUPERFAMILY SSF52210 240 385 5.76E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 Pfam PF08442 ATP-grasp domain 2 203 2.7E-81 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 Pfam PF00549 CoA-ligase 262 382 4.6E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 Gene3D G3DSA:3.40.50.261 240 388 8.8E-58 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 Gene3D G3DSA:3.30.470.20 1 234 2.9E-93 T 14-10-2018 AMBLS11_08920 f91ca71533e9158fd41e1ff687a8bc95 388 PIRSF PIRSF001554 1 388 1.5E-153 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMBLS11_01005 9f7130999ae9ec449bf7091586c0967f 300 Gene3D G3DSA:2.40.10.350 180 257 7.2E-33 T 14-10-2018 AMBLS11_01005 9f7130999ae9ec449bf7091586c0967f 300 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 2 276 2.6E-71 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMBLS11_01005 9f7130999ae9ec449bf7091586c0967f 300 PIRSF PIRSF038471 2 284 4.8E-77 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMBLS11_01005 9f7130999ae9ec449bf7091586c0967f 300 Gene3D G3DSA:2.40.10.340 121 266 7.2E-33 T 14-10-2018 AMBLS11_01005 9f7130999ae9ec449bf7091586c0967f 300 Pfam PF04085 rod shape-determining protein MreC 125 269 1.8E-34 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMBLS11_00480 21e6f4049a03d73723878a26ec9606fc 69 Gene3D G3DSA:3.10.20.30 4 69 7.0E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_00480 21e6f4049a03d73723878a26ec9606fc 69 Pfam PF02597 ThiS family 8 69 5.9E-10 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMBLS11_00480 21e6f4049a03d73723878a26ec9606fc 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 2.7E-16 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis AMBLS11_00480 21e6f4049a03d73723878a26ec9606fc 69 SUPERFAMILY SSF54285 4 69 1.47E-14 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMBLS11_06480 f58591958e7cfeb72756b9aeeb966841 122 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 7 106 5.6E-21 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMBLS11_06480 f58591958e7cfeb72756b9aeeb966841 122 TIGRFAM TIGR00526 folB_dom: FolB domain 7 119 3.9E-34 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMBLS11_06480 f58591958e7cfeb72756b9aeeb966841 122 Pfam PF02152 Dihydroneopterin aldolase 8 116 5.1E-28 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMBLS11_06480 f58591958e7cfeb72756b9aeeb966841 122 SMART SM00905 8 118 2.3E-33 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMBLS11_06480 f58591958e7cfeb72756b9aeeb966841 122 SUPERFAMILY SSF55620 5 116 7.23E-30 T 14-10-2018 AMBLS11_06480 f58591958e7cfeb72756b9aeeb966841 122 Gene3D G3DSA:3.30.1130.10 1 120 9.8E-42 T 14-10-2018 AMBLS11_15370 5428e8730ba4f542a8613179bfa5eb2e 225 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15370 5428e8730ba4f542a8613179bfa5eb2e 225 SUPERFAMILY SSF46894 148 213 2.93E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_15370 5428e8730ba4f542a8613179bfa5eb2e 225 Gene3D G3DSA:1.10.10.10 149 216 2.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15370 5428e8730ba4f542a8613179bfa5eb2e 225 SMART SM00421 156 213 6.4E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15370 5428e8730ba4f542a8613179bfa5eb2e 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15370 5428e8730ba4f542a8613179bfa5eb2e 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15370 5428e8730ba4f542a8613179bfa5eb2e 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_15370 5428e8730ba4f542a8613179bfa5eb2e 225 Gene3D G3DSA:3.40.50.2300 27 142 3.5E-19 T 14-10-2018 AMBLS11_15370 5428e8730ba4f542a8613179bfa5eb2e 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 8.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 SUPERFAMILY SSF50249 6 144 1.71E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 Pfam PF00152 tRNA synthetases class II (D, K and N) 151 507 5.1E-82 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 SUPERFAMILY SSF55681 151 508 4.21E-115 T 14-10-2018 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 251 268 3.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 246 3.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 188 198 3.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 3.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 PRINTS PR00982 Lysyl-tRNA synthetase signature 392 408 3.6E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 Pfam PF01336 OB-fold nucleic acid binding domain 63 135 1.4E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 510 1.1E-197 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 Gene3D G3DSA:3.30.930.10 147 522 1.4E-131 T 14-10-2018 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 510 43.324 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMBLS11_05530 66c9118904b5395f8e1cb390de0b0849 522 Gene3D G3DSA:2.40.50.140 2 143 6.0E-30 T 14-10-2018 AMBLS11_15110 5bf67c0500f543eecc3e431e3b05812c 439 Pfam PF08521 Two-component sensor kinase N-terminal 16 144 3.7E-5 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal AMBLS11_15110 5bf67c0500f543eecc3e431e3b05812c 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 287 3.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_15110 5bf67c0500f543eecc3e431e3b05812c 439 SMART SM00387 331 436 3.4E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15110 5bf67c0500f543eecc3e431e3b05812c 439 SMART SM00388 225 289 3.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_15110 5bf67c0500f543eecc3e431e3b05812c 439 SUPERFAMILY SSF55874 292 435 3.01E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15110 5bf67c0500f543eecc3e431e3b05812c 439 Gene3D G3DSA:3.30.565.10 288 434 1.6E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_15110 5bf67c0500f543eecc3e431e3b05812c 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 423 4.4E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_15110 5bf67c0500f543eecc3e431e3b05812c 439 Gene3D G3DSA:1.10.287.130 176 287 4.6E-18 T 14-10-2018 AMBLS11_15110 5bf67c0500f543eecc3e431e3b05812c 439 SUPERFAMILY SSF47384 208 287 8.63E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_17740 c087179d9b98d47963183b92001d66c6 294 Gene3D G3DSA:1.10.10.10 5 92 9.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_17740 c087179d9b98d47963183b92001d66c6 294 Pfam PF03466 LysR substrate binding domain 90 291 2.7E-34 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_17740 c087179d9b98d47963183b92001d66c6 294 SUPERFAMILY SSF53850 90 293 5.97E-34 T 14-10-2018 AMBLS11_17740 c087179d9b98d47963183b92001d66c6 294 SUPERFAMILY SSF46785 6 90 4.09E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_17740 c087179d9b98d47963183b92001d66c6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_17740 c087179d9b98d47963183b92001d66c6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_17740 c087179d9b98d47963183b92001d66c6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_17740 c087179d9b98d47963183b92001d66c6 294 Gene3D G3DSA:3.40.190.290 93 290 1.2E-35 T 14-10-2018 AMBLS11_17740 c087179d9b98d47963183b92001d66c6 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11055 035ee4d24503c3fbaed438028f7db89b 301 Pfam PF01048 Phosphorylase superfamily 50 295 2.4E-33 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMBLS11_11055 035ee4d24503c3fbaed438028f7db89b 301 SUPERFAMILY SSF53167 35 299 9.15E-46 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMBLS11_11055 035ee4d24503c3fbaed438028f7db89b 301 Gene3D G3DSA:3.40.50.1580 47 300 6.5E-75 T 14-10-2018 AMBLS11_02510 cf08ce3eaa88f45ea8eea12cdcdeed4c 151 Pfam PF00583 Acetyltransferase (GNAT) family 29 129 4.9E-11 T 14-10-2018 IPR000182 GNAT domain AMBLS11_02510 cf08ce3eaa88f45ea8eea12cdcdeed4c 151 Gene3D G3DSA:3.40.630.30 1 151 5.5E-38 T 14-10-2018 AMBLS11_02510 cf08ce3eaa88f45ea8eea12cdcdeed4c 151 SUPERFAMILY SSF55729 1 150 6.0E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_07910 fadd08e7d22de8ad798497b9b19be44c 283 SUPERFAMILY SSF56752 9 254 3.66E-55 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMBLS11_07910 fadd08e7d22de8ad798497b9b19be44c 283 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 8 260 3.2E-76 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AMBLS11_07910 fadd08e7d22de8ad798497b9b19be44c 283 Gene3D G3DSA:3.30.470.10 5 117 6.4E-21 T 14-10-2018 AMBLS11_07910 fadd08e7d22de8ad798497b9b19be44c 283 Gene3D G3DSA:3.20.10.10 127 267 1.5E-42 T 14-10-2018 AMBLS11_07910 fadd08e7d22de8ad798497b9b19be44c 283 Pfam PF01063 Amino-transferase class IV 22 253 1.9E-43 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 Gene3D G3DSA:3.40.190.10 163 261 2.9E-60 T 14-10-2018 AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 SUPERFAMILY SSF46785 2 85 1.82E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 Gene3D G3DSA:3.40.190.10 103 288 2.9E-60 T 14-10-2018 AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 Gene3D G3DSA:1.10.10.10 7 93 4.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 Pfam PF03466 LysR substrate binding domain 91 290 2.4E-35 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_06930 5790d27631bdb62934a10961c43ee5ed 300 SUPERFAMILY SSF53850 91 295 1.47E-34 T 14-10-2018 AMBLS11_09620 f8b096697ddc99aef205a78a05057e19 400 SUPERFAMILY SSF46785 36 107 6.92E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_09620 f8b096697ddc99aef205a78a05057e19 400 Gene3D G3DSA:1.10.10.10 15 74 1.1E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_16280 c2f86455f1bafa645cc0ef89184a95f9 664 Gene3D G3DSA:3.90.550.10 185 495 1.9E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16280 c2f86455f1bafa645cc0ef89184a95f9 664 SUPERFAMILY SSF53448 263 483 2.41E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16280 c2f86455f1bafa645cc0ef89184a95f9 664 Pfam PF00535 Glycosyl transferase family 2 265 394 2.7E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_15880 343c2c75dd033f9fbece99937251379e 143 SUPERFAMILY SSF52540 3 139 5.01E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_15880 343c2c75dd033f9fbece99937251379e 143 Gene3D G3DSA:3.40.50.300 1 139 6.2E-40 T 14-10-2018 AMBLS11_15880 343c2c75dd033f9fbece99937251379e 143 Pfam PF01202 Shikimate kinase 2 126 1.8E-6 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMBLS11_15880 343c2c75dd033f9fbece99937251379e 143 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 2 134 8.1E-38 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AMBLS11_15330 18249f8e76d447aaf0357f4733e55a09 499 Pfam PF00171 Aldehyde dehydrogenase family 15 478 1.0E-132 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMBLS11_15330 18249f8e76d447aaf0357f4733e55a09 499 Gene3D G3DSA:3.40.605.10 23 459 5.3E-142 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_15330 18249f8e76d447aaf0357f4733e55a09 499 SUPERFAMILY SSF53720 5 483 2.88E-140 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_15330 18249f8e76d447aaf0357f4733e55a09 499 Gene3D G3DSA:3.40.309.10 249 451 5.3E-142 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMBLS11_15330 18249f8e76d447aaf0357f4733e55a09 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 7.5E-188 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AMBLS11_09050 9f36ab0feb774b21c25c3567dd22ec92 161 Pfam PF00255 Glutathione peroxidase 4 110 1.5E-41 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_09050 9f36ab0feb774b21c25c3567dd22ec92 161 SUPERFAMILY SSF52833 5 158 8.38E-62 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_09050 9f36ab0feb774b21c25c3567dd22ec92 161 Gene3D G3DSA:3.40.30.10 2 161 7.8E-71 T 14-10-2018 AMBLS11_09050 9f36ab0feb774b21c25c3567dd22ec92 161 PIRSF PIRSF000303 1 161 1.0E-65 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_09050 9f36ab0feb774b21c25c3567dd22ec92 161 PRINTS PR01011 Glutathione peroxidase family signature 56 72 3.9E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_09050 9f36ab0feb774b21c25c3567dd22ec92 161 PRINTS PR01011 Glutathione peroxidase family signature 122 131 3.9E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_09050 9f36ab0feb774b21c25c3567dd22ec92 161 PRINTS PR01011 Glutathione peroxidase family signature 21 38 3.9E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_09050 9f36ab0feb774b21c25c3567dd22ec92 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AMBLS11_11450 c21d37c5f58fe81f82a27bd6e0217558 260 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 12 254 1.2E-102 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AMBLS11_11450 c21d37c5f58fe81f82a27bd6e0217558 260 Gene3D G3DSA:1.20.1260.10 109 260 4.6E-51 T 14-10-2018 IPR012347 Ferritin-like AMBLS11_11450 c21d37c5f58fe81f82a27bd6e0217558 260 Gene3D G3DSA:1.20.1260.10 9 75 1.0E-16 T 14-10-2018 IPR012347 Ferritin-like AMBLS11_11450 c21d37c5f58fe81f82a27bd6e0217558 260 PIRSF PIRSF020736 4 259 1.1E-87 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AMBLS11_11450 c21d37c5f58fe81f82a27bd6e0217558 260 SUPERFAMILY SSF47240 13 257 3.93E-70 T 14-10-2018 IPR009078 Ferritin-like superfamily AMBLS11_18825 51f609ea7e2b79fe9e5828442ad982b6 213 Pfam PF00156 Phosphoribosyl transferase domain 47 147 1.6E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMBLS11_18825 51f609ea7e2b79fe9e5828442ad982b6 213 Gene3D G3DSA:3.40.50.2020 1 213 1.1E-74 T 14-10-2018 AMBLS11_18825 51f609ea7e2b79fe9e5828442ad982b6 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.6E-63 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_18825 51f609ea7e2b79fe9e5828442ad982b6 213 SUPERFAMILY SSF53271 2 211 2.21E-47 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMBLS11_18825 51f609ea7e2b79fe9e5828442ad982b6 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 33.688 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_04065 114d9b9471e40df82bfcfcc4cef54180 191 Pfam PF13505 Outer membrane protein beta-barrel domain 9 174 1.1E-12 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel AMBLS11_04065 114d9b9471e40df82bfcfcc4cef54180 191 Gene3D G3DSA:2.40.160.20 21 191 4.1E-7 T 14-10-2018 AMBLS11_04065 114d9b9471e40df82bfcfcc4cef54180 191 SUPERFAMILY SSF56925 29 191 3.92E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMBLS11_13535 cc7fd75fce0abaa6e41657e39907c82b 480 Pfam PF00144 Beta-lactamase 38 358 2.9E-46 T 14-10-2018 IPR001466 Beta-lactamase-related AMBLS11_13535 cc7fd75fce0abaa6e41657e39907c82b 480 SUPERFAMILY SSF56601 36 365 8.45E-62 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMBLS11_13535 cc7fd75fce0abaa6e41657e39907c82b 480 Gene3D G3DSA:3.40.710.10 27 378 2.8E-66 T 14-10-2018 AMBLS11_07670 47fc002fd1b10f52c97e1a84d7ab09ed 411 Gene3D G3DSA:3.90.1150.10 11 394 1.1E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_07670 47fc002fd1b10f52c97e1a84d7ab09ed 411 Pfam PF00266 Aminotransferase class-V 153 323 7.7E-16 T 14-10-2018 IPR000192 Aminotransferase class V domain AMBLS11_07670 47fc002fd1b10f52c97e1a84d7ab09ed 411 SUPERFAMILY SSF53383 10 396 1.68E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_07670 47fc002fd1b10f52c97e1a84d7ab09ed 411 Gene3D G3DSA:3.40.640.10 42 299 1.1E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_07670 47fc002fd1b10f52c97e1a84d7ab09ed 411 TIGRFAM TIGR01814 kynureninase: kynureninase 8 394 2.7E-83 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AMBLS11_07670 47fc002fd1b10f52c97e1a84d7ab09ed 411 PIRSF PIRSF038800 1 402 3.0E-138 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AMBLS11_05340 434ba5b1a3c87005fabcb57f59b092a0 203 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 124 199 2.1E-18 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMBLS11_05340 434ba5b1a3c87005fabcb57f59b092a0 203 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 124 196 3.8E-18 T 14-10-2018 IPR006260 TonB/TolA, C-terminal AMBLS11_05340 434ba5b1a3c87005fabcb57f59b092a0 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 118 139 8.1E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_05340 434ba5b1a3c87005fabcb57f59b092a0 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 61 71 8.1E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_05340 434ba5b1a3c87005fabcb57f59b092a0 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 175 8.1E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_05340 434ba5b1a3c87005fabcb57f59b092a0 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 157 8.1E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_05340 434ba5b1a3c87005fabcb57f59b092a0 203 SUPERFAMILY SSF74653 114 193 1.12E-25 T 14-10-2018 AMBLS11_05340 434ba5b1a3c87005fabcb57f59b092a0 203 Gene3D G3DSA:3.30.1150.10 105 202 1.4E-28 T 14-10-2018 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 7.2E-122 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 607 7.5E-26 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 PIRSF PIRSF000727 1 818 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 SUPERFAMILY SSF55021 306 381 1.26E-20 T 14-10-2018 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 Pfam PF01842 ACT domain 324 380 6.3E-8 T 14-10-2018 IPR002912 ACT domain AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 Pfam PF00696 Amino acid kinase family 2 284 8.5E-42 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 SUPERFAMILY SSF55021 383 475 8.01E-23 T 14-10-2018 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 Gene3D G3DSA:3.40.1160.10 3 295 1.4E-79 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 SUPERFAMILY SSF55347 615 798 7.19E-51 T 14-10-2018 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 Gene3D G3DSA:3.40.50.720 466 812 7.5E-119 T 14-10-2018 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 Pfam PF00742 Homoserine dehydrogenase 615 811 4.2E-49 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 SUPERFAMILY SSF53633 1 298 1.86E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 SUPERFAMILY SSF51735 464 637 2.42E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 Gene3D G3DSA:1.20.120.1320 41 142 1.4E-79 T 14-10-2018 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 Gene3D G3DSA:3.30.2130.10 304 464 2.4E-48 T 14-10-2018 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 661 683 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMBLS11_14335 a91d626fe4e4a5f66c752f1a955afcfd 821 Gene3D G3DSA:3.30.360.10 626 796 7.5E-119 T 14-10-2018 AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 SMART SM00257 442 486 1.0E-15 T 14-10-2018 IPR018392 LysM domain AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 SMART SM00257 500 544 3.4E-12 T 14-10-2018 IPR018392 LysM domain AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 SMART SM00257 368 411 6.7E-14 T 14-10-2018 IPR018392 LysM domain AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 SUPERFAMILY SSF54106 441 486 1.24E-12 T 14-10-2018 AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 SUPERFAMILY SSF53955 136 285 3.94E-44 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 SUPERFAMILY SSF54106 499 544 1.11E-10 T 14-10-2018 AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 Gene3D G3DSA:1.10.530.10 132 287 5.1E-32 T 14-10-2018 AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 157 185 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 Pfam PF01464 Transglycosylase SLT domain 142 250 3.6E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 Pfam PF01476 LysM domain 443 486 5.6E-15 T 14-10-2018 IPR018392 LysM domain AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 Pfam PF01476 LysM domain 501 543 1.4E-12 T 14-10-2018 IPR018392 LysM domain AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 Pfam PF01476 LysM domain 369 411 1.3E-11 T 14-10-2018 IPR018392 LysM domain AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 Gene3D G3DSA:3.10.350.10 497 546 1.2E-15 T 14-10-2018 IPR036779 LysM domain superfamily AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 Gene3D G3DSA:3.10.350.10 429 496 1.1E-17 T 14-10-2018 IPR036779 LysM domain superfamily AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 Gene3D G3DSA:3.10.350.10 356 418 1.9E-14 T 14-10-2018 IPR036779 LysM domain superfamily AMBLS11_11345 c7d614a2196619a885cf7d7ceb1c9e17 554 SUPERFAMILY SSF54106 366 411 1.57E-10 T 14-10-2018 AMBLS11_14660 89c1ba87e5b6b251f33a32e9e62a2cbc 201 Gene3D G3DSA:3.40.630.30 22 176 4.7E-12 T 14-10-2018 AMBLS11_14660 89c1ba87e5b6b251f33a32e9e62a2cbc 201 Pfam PF00583 Acetyltransferase (GNAT) family 46 156 3.3E-7 T 14-10-2018 IPR000182 GNAT domain AMBLS11_14660 89c1ba87e5b6b251f33a32e9e62a2cbc 201 SUPERFAMILY SSF55729 14 169 3.31E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_18685 8234bb568287a87ba9fbde7d67561091 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.9E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_18685 8234bb568287a87ba9fbde7d67561091 290 SUPERFAMILY SSF53850 89 284 5.35E-34 T 14-10-2018 AMBLS11_18685 8234bb568287a87ba9fbde7d67561091 290 Gene3D G3DSA:3.40.190.10 165 261 3.7E-30 T 14-10-2018 AMBLS11_18685 8234bb568287a87ba9fbde7d67561091 290 Gene3D G3DSA:1.10.10.10 1 83 1.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_18685 8234bb568287a87ba9fbde7d67561091 290 SUPERFAMILY SSF46785 1 84 7.14E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_18685 8234bb568287a87ba9fbde7d67561091 290 Gene3D G3DSA:3.40.190.10 90 284 3.7E-30 T 14-10-2018 AMBLS11_18685 8234bb568287a87ba9fbde7d67561091 290 Pfam PF03466 LysR substrate binding domain 88 284 1.3E-37 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_02360 dbb02bf9d977f6707c8661cbfc2c7150 157 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMBLS11_02360 dbb02bf9d977f6707c8661cbfc2c7150 157 SUPERFAMILY SSF47240 4 156 3.88E-49 T 14-10-2018 IPR009078 Ferritin-like superfamily AMBLS11_02360 dbb02bf9d977f6707c8661cbfc2c7150 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 2.0E-12 T 14-10-2018 IPR002177 DNA-binding protein Dps AMBLS11_02360 dbb02bf9d977f6707c8661cbfc2c7150 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 2.0E-12 T 14-10-2018 IPR002177 DNA-binding protein Dps AMBLS11_02360 dbb02bf9d977f6707c8661cbfc2c7150 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 2.0E-12 T 14-10-2018 IPR002177 DNA-binding protein Dps AMBLS11_02360 dbb02bf9d977f6707c8661cbfc2c7150 157 Gene3D G3DSA:1.20.1260.10 1 157 1.1E-60 T 14-10-2018 IPR012347 Ferritin-like AMBLS11_02360 dbb02bf9d977f6707c8661cbfc2c7150 157 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMBLS11_02360 dbb02bf9d977f6707c8661cbfc2c7150 157 Pfam PF00210 Ferritin-like domain 18 155 1.1E-31 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMBLS11_02360 dbb02bf9d977f6707c8661cbfc2c7150 157 PIRSF PIRSF005900 1 157 8.0E-52 T 14-10-2018 IPR002177 DNA-binding protein Dps AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 Gene3D G3DSA:3.40.190.10 117 282 6.5E-45 T 14-10-2018 AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 SUPERFAMILY SSF46785 25 133 5.44E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 SUPERFAMILY SSF53850 110 305 7.14E-21 T 14-10-2018 AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 3.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 3.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 29 85 2.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 Pfam PF03466 LysR substrate binding domain 110 270 9.7E-22 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 Gene3D G3DSA:1.10.10.10 25 114 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_02500 9611443e1e7a2dd1e4864eb7c1836991 306 Gene3D G3DSA:3.40.190.10 184 277 6.5E-45 T 14-10-2018 AMBLS11_12590 a6cecd8212fd3520e7aa3367225f8a69 181 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 3.8E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12590 a6cecd8212fd3520e7aa3367225f8a69 181 SUPERFAMILY SSF54523 8 143 1.33E-14 T 14-10-2018 AMBLS11_12590 a6cecd8212fd3520e7aa3367225f8a69 181 Gene3D G3DSA:3.30.700.10 8 179 2.2E-10 T 14-10-2018 AMBLS11_12590 a6cecd8212fd3520e7aa3367225f8a69 181 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.1E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12590 a6cecd8212fd3520e7aa3367225f8a69 181 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12590 a6cecd8212fd3520e7aa3367225f8a69 181 Pfam PF12019 Type II transport protein GspH 44 144 4.7E-13 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 Gene3D G3DSA:3.30.980.10 552 687 4.9E-52 T 14-10-2018 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 Gene3D G3DSA:2.40.30.130 452 542 1.8E-12 T 14-10-2018 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 Gene3D G3DSA:3.30.930.10 2 243 6.4E-118 T 14-10-2018 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 Gene3D G3DSA:3.30.54.20 614 667 4.9E-52 T 14-10-2018 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.4E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 1.4E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 273 289 1.4E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 1.4E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 297 310 1.4E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 844 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 Pfam PF01411 tRNA synthetases class II (A) 8 544 3.0E-231 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 SUPERFAMILY SSF55186 542 701 4.97E-53 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 Gene3D G3DSA:3.10.310.40 754 862 1.7E-32 T 14-10-2018 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 SUPERFAMILY SSF101353 247 454 4.32E-61 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 SUPERFAMILY SSF50447 446 542 6.36E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 SMART SM00863 643 686 5.6E-24 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 865 201.249 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 643 686 1.1E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 SUPERFAMILY SSF55681 4 246 6.71E-111 T 14-10-2018 AMBLS11_05170 2a9e4c7917dd66d1186c484ab3008827 865 Pfam PF02272 DHHA1 domain 723 861 1.2E-30 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AMBLS11_17220 e47727af8431f89202533a8fd2df5ad0 202 SUPERFAMILY SSF52833 1 89 1.04E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_17220 e47727af8431f89202533a8fd2df5ad0 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 137 197 2.4E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMBLS11_17220 e47727af8431f89202533a8fd2df5ad0 202 SUPERFAMILY SSF47616 78 201 1.95E-25 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_17220 e47727af8431f89202533a8fd2df5ad0 202 Gene3D G3DSA:1.20.1050.10 82 197 7.5E-66 T 14-10-2018 AMBLS11_17220 e47727af8431f89202533a8fd2df5ad0 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 81 2.1E-18 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_17220 e47727af8431f89202533a8fd2df5ad0 202 Gene3D G3DSA:3.40.30.10 8 201 7.5E-66 T 14-10-2018 AMBLS11_05305 4ff0443959527617fed48fb00e207002 329 Gene3D G3DSA:2.60.120.330 106 304 1.8E-34 T 14-10-2018 IPR027443 Isopenicillin N synthase-like AMBLS11_05305 4ff0443959527617fed48fb00e207002 329 SUPERFAMILY SSF51197 169 294 2.75E-13 T 14-10-2018 AMBLS11_05305 4ff0443959527617fed48fb00e207002 329 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 162 293 8.1E-25 T 14-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AMBLS11_18625 7b17cddc16254581b93b085e62588070 297 Gene3D G3DSA:1.10.287.70 4 80 3.9E-17 T 14-10-2018 AMBLS11_18625 7b17cddc16254581b93b085e62588070 297 Gene3D G3DSA:1.20.120.80 82 297 1.8E-63 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18625 7b17cddc16254581b93b085e62588070 297 SUPERFAMILY SSF81452 8 297 9.63E-78 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18625 7b17cddc16254581b93b085e62588070 297 Pfam PF00510 Cytochrome c oxidase subunit III 13 296 1.5E-49 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_14550 3c0637d6188809a34ef646b7665d5e4a 754 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 170 2.7E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_14550 3c0637d6188809a34ef646b7665d5e4a 754 SUPERFAMILY SSF56935 38 733 8.7E-101 T 14-10-2018 AMBLS11_14550 3c0637d6188809a34ef646b7665d5e4a 754 Pfam PF00593 TonB dependent receptor 290 728 2.0E-24 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_14550 3c0637d6188809a34ef646b7665d5e4a 754 Gene3D G3DSA:2.40.170.20 53 754 8.3E-114 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_14700 90268d9937cf7140de994758001d4125 400 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 399 39.372 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AMBLS11_14700 90268d9937cf7140de994758001d4125 400 Gene3D G3DSA:3.30.420.40 154 359 4.4E-127 T 14-10-2018 AMBLS11_14700 90268d9937cf7140de994758001d4125 400 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 3 398 5.1E-136 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AMBLS11_14700 90268d9937cf7140de994758001d4125 400 Gene3D G3DSA:3.30.420.40 9 394 4.4E-127 T 14-10-2018 AMBLS11_14700 90268d9937cf7140de994758001d4125 400 SUPERFAMILY SSF53067 3 351 1.94E-21 T 14-10-2018 AMBLS11_16820 39c22487edc59da8980da269440a09d2 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 138 2.0E-9 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMBLS11_16820 39c22487edc59da8980da269440a09d2 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMBLS11_16820 39c22487edc59da8980da269440a09d2 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 2.0E-50 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMBLS11_16820 39c22487edc59da8980da269440a09d2 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 28.555 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMBLS11_16820 39c22487edc59da8980da269440a09d2 149 SUPERFAMILY SSF109635 8 108 1.16E-35 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily AMBLS11_16820 39c22487edc59da8980da269440a09d2 149 SUPERFAMILY SSF57716 109 147 2.42E-9 T 14-10-2018 AMBLS11_16820 39c22487edc59da8980da269440a09d2 149 Gene3D G3DSA:1.20.120.910 19 148 7.4E-35 T 14-10-2018 AMBLS11_15055 7dd6e4ee5111b5d27dab242e0106caf4 696 Gene3D G3DSA:1.10.486.10 410 555 8.0E-68 T 14-10-2018 AMBLS11_15055 7dd6e4ee5111b5d27dab242e0106caf4 696 Pfam PF13361 UvrD-like helicase C-terminal domain 305 627 6.0E-44 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMBLS11_15055 7dd6e4ee5111b5d27dab242e0106caf4 696 Gene3D G3DSA:1.10.10.160 132 217 1.3E-68 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMBLS11_15055 7dd6e4ee5111b5d27dab242e0106caf4 696 Pfam PF00580 UvrD/REP helicase N-terminal domain 26 298 2.4E-52 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMBLS11_15055 7dd6e4ee5111b5d27dab242e0106caf4 696 SUPERFAMILY SSF52540 6 636 5.01E-116 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_15055 7dd6e4ee5111b5d27dab242e0106caf4 696 Gene3D G3DSA:3.40.50.300 309 654 8.0E-68 T 14-10-2018 AMBLS11_15055 7dd6e4ee5111b5d27dab242e0106caf4 696 Gene3D G3DSA:3.40.50.300 26 298 1.3E-68 T 14-10-2018 AMBLS11_01890 1b90a64fd91970adac53317473ba6189 426 Gene3D G3DSA:3.40.640.10 69 317 1.3E-176 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_01890 1b90a64fd91970adac53317473ba6189 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.5E-194 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AMBLS11_01890 1b90a64fd91970adac53317473ba6189 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.388 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AMBLS11_01890 1b90a64fd91970adac53317473ba6189 426 Pfam PF00202 Aminotransferase class-III 32 397 6.5E-78 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_01890 1b90a64fd91970adac53317473ba6189 426 SUPERFAMILY SSF53383 2 424 9.96E-135 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_01890 1b90a64fd91970adac53317473ba6189 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMBLS11_01890 1b90a64fd91970adac53317473ba6189 426 Gene3D G3DSA:3.90.1150.10 7 419 1.3E-176 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_12850 b9bcd302787448d1fdce79f8808823e3 427 SUPERFAMILY SSF52954 329 424 2.29E-22 T 14-10-2018 AMBLS11_12850 b9bcd302787448d1fdce79f8808823e3 427 Pfam PF13393 Histidyl-tRNA synthetase 10 312 9.6E-49 T 14-10-2018 AMBLS11_12850 b9bcd302787448d1fdce79f8808823e3 427 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 408 4.7E-156 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AMBLS11_12850 b9bcd302787448d1fdce79f8808823e3 427 Pfam PF03129 Anticodon binding domain 330 422 2.2E-10 T 14-10-2018 IPR004154 Anticodon-binding AMBLS11_12850 b9bcd302787448d1fdce79f8808823e3 427 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 426 33.306 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AMBLS11_12850 b9bcd302787448d1fdce79f8808823e3 427 SUPERFAMILY SSF55681 5 318 3.58E-106 T 14-10-2018 AMBLS11_12850 b9bcd302787448d1fdce79f8808823e3 427 Gene3D G3DSA:3.30.930.10 2 322 1.1E-117 T 14-10-2018 AMBLS11_12850 b9bcd302787448d1fdce79f8808823e3 427 PIRSF PIRSF001549 2 424 7.1E-122 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AMBLS11_12850 b9bcd302787448d1fdce79f8808823e3 427 Gene3D G3DSA:3.40.50.800 328 424 5.5E-23 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily AMBLS11_03580 428ad0568b0b79995f2c609c7da098a8 147 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 6 143 4.2E-44 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AMBLS11_03580 428ad0568b0b79995f2c609c7da098a8 147 SUPERFAMILY SSF55804 1 146 1.96E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMBLS11_03580 428ad0568b0b79995f2c609c7da098a8 147 Gene3D G3DSA:3.40.930.10 1 147 2.5E-48 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMBLS11_03580 428ad0568b0b79995f2c609c7da098a8 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 146 8.8E-36 T 14-10-2018 IPR002178 PTS EIIA type-2 domain AMBLS11_03580 428ad0568b0b79995f2c609c7da098a8 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 81 24.666 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 77 3.0E-30 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 Gene3D G3DSA:2.40.50.140 2 84 1.1E-36 T 14-10-2018 AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 SUPERFAMILY SSF50249 7 84 2.53E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 6.5E-37 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 3.2E-13 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 3.2E-13 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 3.2E-13 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01765 57e1dfc95fc60a5a30d1819ef59463de 85 Pfam PF00366 Ribosomal protein S17 11 77 1.9E-33 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_03350 7351db374961791805193f1296aa1843 124 Gene3D G3DSA:2.60.40.1470 1 124 2.5E-45 T 14-10-2018 IPR036767 ApaG domain superfamily AMBLS11_03350 7351db374961791805193f1296aa1843 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 28.392 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG AMBLS11_03350 7351db374961791805193f1296aa1843 124 SUPERFAMILY SSF110069 5 124 5.89E-46 T 14-10-2018 IPR036767 ApaG domain superfamily AMBLS11_03350 7351db374961791805193f1296aa1843 124 Pfam PF04379 ApaG domain 21 101 2.3E-33 T 14-10-2018 IPR007474 ApaG domain AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 Pfam PF06827 Zinc finger found in FPG and IleRS 899 927 3.7E-8 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 Gene3D G3DSA:3.90.740.10 195 412 2.6E-240 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 SUPERFAMILY SSF50677 203 407 2.93E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 Gene3D G3DSA:1.10.730.20 643 930 3.3E-87 T 14-10-2018 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 SUPERFAMILY SSF47323 655 930 1.26E-71 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 Pfam PF08264 Anticodon-binding domain of tRNA 687 842 8.2E-26 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 4.8E-288 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 930 21.291 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 643 3.1E-213 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 405 420 2.7E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 530 543 2.7E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.7E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 564 573 2.7E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 2.7E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 SUPERFAMILY SSF52374 4 651 1.19E-139 T 14-10-2018 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_12660 0c9d7805c660436a031046b36de6ba3f 939 Gene3D G3DSA:3.40.50.620 25 632 2.6E-240 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_15515 e82f36b48b92bad75a811ad11ea114f4 154 Gene3D G3DSA:3.30.70.330 53 154 3.6E-23 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMBLS11_15515 e82f36b48b92bad75a811ad11ea114f4 154 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 74 143 3.5E-14 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AMBLS11_15515 e82f36b48b92bad75a811ad11ea114f4 154 SMART SM00360 73 145 3.0E-16 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AMBLS11_15515 e82f36b48b92bad75a811ad11ea114f4 154 SUPERFAMILY SSF54928 60 151 3.76E-22 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AMBLS11_13330 36672092abcea3a20e50725552561ba6 260 SMART SM00967 22 101 0.0021 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMBLS11_13330 36672092abcea3a20e50725552561ba6 260 SUPERFAMILY SSF75217 115 260 3.03E-28 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMBLS11_13330 36672092abcea3a20e50725552561ba6 260 Pfam PF00588 SpoU rRNA Methylase family 121 256 6.7E-27 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMBLS11_13330 36672092abcea3a20e50725552561ba6 260 Gene3D G3DSA:3.40.1280.10 108 260 1.5E-32 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMBLS11_13330 36672092abcea3a20e50725552561ba6 260 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 22 98 1.7E-6 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMBLS11_13330 36672092abcea3a20e50725552561ba6 260 SUPERFAMILY SSF55315 3 99 6.83E-13 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMBLS11_13330 36672092abcea3a20e50725552561ba6 260 Gene3D G3DSA:3.30.1330.30 1 99 2.7E-10 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 PIRSF PIRSF000166 2 310 3.5E-129 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 Pfam PF01218 Coproporphyrinogen III oxidase 18 310 5.1E-134 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 176 200 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 PRINTS PR00073 Coprogen oxidase signature 100 124 2.1E-86 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 PRINTS PR00073 Coprogen oxidase signature 41 57 2.1E-86 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 PRINTS PR00073 Coprogen oxidase signature 172 201 2.1E-86 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 PRINTS PR00073 Coprogen oxidase signature 272 298 2.1E-86 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 PRINTS PR00073 Coprogen oxidase signature 58 79 2.1E-86 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 PRINTS PR00073 Coprogen oxidase signature 135 157 2.1E-86 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 PRINTS PR00073 Coprogen oxidase signature 244 271 2.1E-86 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 Gene3D G3DSA:3.40.1500.10 7 310 2.7E-139 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 SUPERFAMILY SSF102886 15 308 2.35E-139 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_00140 ebb3510ffdf682f58da1b05490e96731 310 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 13 287 57.585 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMBLS11_07705 31bb9cc644d21ea9ae6e232e9be4c764 772 Gene3D G3DSA:2.120.10.30 426 770 1.7E-108 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_07705 31bb9cc644d21ea9ae6e232e9be4c764 772 Gene3D G3DSA:2.120.10.30 113 310 6.6E-11 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_07705 31bb9cc644d21ea9ae6e232e9be4c764 772 SUPERFAMILY SSF50956 432 757 8.76E-63 T 14-10-2018 AMBLS11_07705 31bb9cc644d21ea9ae6e232e9be4c764 772 SUPERFAMILY SSF50956 119 299 1.09E-16 T 14-10-2018 AMBLS11_07705 31bb9cc644d21ea9ae6e232e9be4c764 772 Pfam PF02333 Phytase 425 759 1.2E-65 T 14-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 AMBLS11_15475 604817391a69c03af9038e606eb473da 391 SUPERFAMILY SSF53383 45 382 1.63E-63 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_15475 604817391a69c03af9038e606eb473da 391 Gene3D G3DSA:3.40.640.10 65 287 4.8E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_15475 604817391a69c03af9038e606eb473da 391 Gene3D G3DSA:3.90.1150.10 49 367 4.8E-80 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_15475 604817391a69c03af9038e606eb473da 391 Pfam PF00155 Aminotransferase class I and II 51 376 3.0E-43 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_01495 f8218f09d9e6bd744b6f9c47d2f442be 394 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 174 311 9.1E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_01495 f8218f09d9e6bd744b6f9c47d2f442be 394 SMART SM00283 100 349 1.3E-11 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_01495 f8218f09d9e6bd744b6f9c47d2f442be 394 Gene3D G3DSA:1.10.287.950 71 373 1.1E-42 T 14-10-2018 AMBLS11_01495 f8218f09d9e6bd744b6f9c47d2f442be 394 SUPERFAMILY SSF58104 104 324 8.63E-41 T 14-10-2018 AMBLS11_06555 4be4e27d0c85e14a503a6ba70d495c68 287 Hamap MF_01805 Segregation and condensation protein A [scpA]. 52 283 21.012 T 14-10-2018 IPR003768 Segregation and condensation protein A AMBLS11_06555 4be4e27d0c85e14a503a6ba70d495c68 287 Pfam PF02616 Segregation and condensation protein ScpA 69 280 3.9E-29 T 14-10-2018 IPR003768 Segregation and condensation protein A AMBLS11_15795 83dfe0e0549832475d892f5fd9e5a583 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 307 1.8E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMBLS11_15795 83dfe0e0549832475d892f5fd9e5a583 346 SUPERFAMILY SSF53686 6 311 2.1E-79 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMBLS11_15795 83dfe0e0549832475d892f5fd9e5a583 346 Gene3D G3DSA:3.40.50.1100 53 149 1.2E-93 T 14-10-2018 AMBLS11_15795 83dfe0e0549832475d892f5fd9e5a583 346 Gene3D G3DSA:3.40.50.1100 10 311 1.2E-93 T 14-10-2018 AMBLS11_15245 a736fcb74d2447cc55c6a958ca613771 306 SUPERFAMILY SSF56281 1 306 5.5E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_15245 a736fcb74d2447cc55c6a958ca613771 306 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 305 1.8E-119 T 14-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B AMBLS11_15245 a736fcb74d2447cc55c6a958ca613771 306 Pfam PF12706 Beta-lactamase superfamily domain 50 273 6.0E-41 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_15245 a736fcb74d2447cc55c6a958ca613771 306 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 306 141.638 T 14-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B AMBLS11_15245 a736fcb74d2447cc55c6a958ca613771 306 Gene3D G3DSA:3.60.15.10 1 306 3.4E-85 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_04170 9ea0a967d3c0ca479320c15cee28b8dc 178 Pfam PF07603 Protein of unknown function (DUF1566) 50 173 3.5E-28 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 Gene3D G3DSA:1.10.8.60 304 368 9.3E-22 T 14-10-2018 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 SUPERFAMILY SSF46689 343 437 5.08E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 SMART SM00448 2 113 4.4E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 Pfam PF02954 Bacterial regulatory protein, Fis family 396 436 1.7E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 SMART SM00382 154 296 5.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 SUPERFAMILY SSF52172 2 178 1.42E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 Pfam PF00158 Sigma-54 interaction domain 134 299 1.4E-62 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 SUPERFAMILY SSF52540 134 366 6.39E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.6E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.6E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 158 171 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 Gene3D G3DSA:3.40.50.300 120 303 9.1E-59 T 14-10-2018 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 Gene3D G3DSA:1.10.10.60 369 439 1.3E-15 T 14-10-2018 AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 345 354 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMBLS11_10880 490ee24ea6a5abc3e6fbeda1493cec6c 443 Gene3D G3DSA:3.40.50.2300 3 119 2.8E-22 T 14-10-2018 AMBLS11_00205 b0e651d1c1ccd4a68a72fdf4b0458c75 111 PIRSF PIRSF028538 1 110 7.5E-42 T 14-10-2018 IPR014949 Protein of unknown function DUF1820 AMBLS11_00205 b0e651d1c1ccd4a68a72fdf4b0458c75 111 Pfam PF08850 Domain of unknown function (DUF1820) 7 103 1.8E-40 T 14-10-2018 IPR014949 Protein of unknown function DUF1820 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 PIRSF PIRSF006092 1 157 1.9E-44 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 SUPERFAMILY SSF46557 3 78 6.28E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 Gene3D G3DSA:1.10.287.180 1 76 4.6E-31 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 27.042 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 1.5E-21 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 155 2.5E-76 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.6E-25 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 SUPERFAMILY SSF54534 80 155 3.01E-19 T 14-10-2018 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 50.834 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMBLS11_18395 851200d982309d56e9552ee19b026528 161 Gene3D G3DSA:3.10.50.30 77 158 1.6E-29 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AMBLS11_05025 2a9c3ca703ed5bce1e7b96a64aeef27d 324 Pfam PF08291 Peptidase M15 181 259 8.8E-8 T 14-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 AMBLS11_05025 2a9c3ca703ed5bce1e7b96a64aeef27d 324 SUPERFAMILY SSF55166 176 317 5.89E-15 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMBLS11_05025 2a9c3ca703ed5bce1e7b96a64aeef27d 324 Gene3D G3DSA:3.30.1380.10 189 279 2.1E-8 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMBLS11_05135 2ff0cbce19de0372814ffe3072fb4031 217 SUPERFAMILY SSF53056 1 210 2.35E-65 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMBLS11_05135 2ff0cbce19de0372814ffe3072fb4031 217 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMBLS11_05135 2ff0cbce19de0372814ffe3072fb4031 217 Pfam PF00484 Carbonic anhydrase 35 191 3.0E-50 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMBLS11_05135 2ff0cbce19de0372814ffe3072fb4031 217 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMBLS11_05135 2ff0cbce19de0372814ffe3072fb4031 217 SMART SM00947 27 195 1.6E-65 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMBLS11_05135 2ff0cbce19de0372814ffe3072fb4031 217 Gene3D G3DSA:3.40.1050.10 1 204 6.7E-71 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMBLS11_14815 66731222d5ff44e57db98a30f60a6b1b 398 Pfam PF01566 Natural resistance-associated macrophage protein 20 371 2.9E-81 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMBLS11_12015 eac052defb3bf991788e81a78d4910e3 283 Gene3D G3DSA:3.20.20.150 3 278 5.5E-85 T 14-10-2018 AMBLS11_12015 eac052defb3bf991788e81a78d4910e3 283 Pfam PF05114 Protein of unknown function (DUF692) 6 267 3.9E-100 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 AMBLS11_12015 eac052defb3bf991788e81a78d4910e3 283 SUPERFAMILY SSF51658 27 205 2.29E-7 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMBLS11_12015 eac052defb3bf991788e81a78d4910e3 283 Hamap MF_00697 UPF0276 protein . 7 275 43.635 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 AMBLS11_02410 cf7e14da9a0dbe7520d95d804d592de4 139 SUPERFAMILY SSF54593 5 134 7.47E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_02410 cf7e14da9a0dbe7520d95d804d592de4 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 8.2E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMBLS11_02410 cf7e14da9a0dbe7520d95d804d592de4 139 Gene3D G3DSA:3.10.180.10 1 135 8.5E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_08265 159bb3f322cbf600114a24320fe6d766 158 SMART SM00347 24 124 2.6E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_08265 159bb3f322cbf600114a24320fe6d766 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_08265 159bb3f322cbf600114a24320fe6d766 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_08265 159bb3f322cbf600114a24320fe6d766 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_08265 159bb3f322cbf600114a24320fe6d766 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_08265 159bb3f322cbf600114a24320fe6d766 158 Pfam PF01047 MarR family 31 89 4.1E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_08265 159bb3f322cbf600114a24320fe6d766 158 Gene3D G3DSA:1.10.10.10 1 142 1.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_08265 159bb3f322cbf600114a24320fe6d766 158 SUPERFAMILY SSF46785 4 141 4.1E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 SUPERFAMILY SSF53067 254 490 6.18E-79 T 14-10-2018 AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 Hamap MF_00186 Glycerol kinase [glpK]. 2 494 53.246 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 Gene3D G3DSA:3.30.420.40 253 492 1.5E-86 T 14-10-2018 AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 448 7.7E-57 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 251 8.2E-75 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 PIRSF PIRSF000538 2 493 8.5E-169 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 Gene3D G3DSA:3.30.420.40 1 252 5.1E-104 T 14-10-2018 AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 SUPERFAMILY SSF53067 4 254 1.17E-91 T 14-10-2018 AMBLS11_00970 fa422ace5006c4b9f2244c4aee150fa4 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 490 6.5E-218 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMBLS11_02085 78a56aed26716e30a6daba9b36903838 436 SUPERFAMILY SSF55729 291 415 1.05E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_02085 78a56aed26716e30a6daba9b36903838 436 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 434 3.4E-175 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AMBLS11_02085 78a56aed26716e30a6daba9b36903838 436 SUPERFAMILY SSF53633 5 288 9.95E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_02085 78a56aed26716e30a6daba9b36903838 436 Pfam PF00696 Amino acid kinase family 25 233 6.5E-30 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMBLS11_02085 78a56aed26716e30a6daba9b36903838 436 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 436 199.264 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AMBLS11_02085 78a56aed26716e30a6daba9b36903838 436 PIRSF PIRSF000423 1 436 6.8E-180 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AMBLS11_02085 78a56aed26716e30a6daba9b36903838 436 Pfam PF00583 Acetyltransferase (GNAT) family 320 396 9.0E-9 T 14-10-2018 IPR000182 GNAT domain AMBLS11_02085 78a56aed26716e30a6daba9b36903838 436 Gene3D G3DSA:3.40.630.30 288 436 3.4E-37 T 14-10-2018 AMBLS11_02085 78a56aed26716e30a6daba9b36903838 436 Gene3D G3DSA:3.40.1160.10 9 287 1.1E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_14305 b1a3cb0f1e1e1195762ad9c38bc8697a 319 Hamap MF_00492 Transaldolase [tal]. 2 317 51.829 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_14305 b1a3cb0f1e1e1195762ad9c38bc8697a 319 TIGRFAM TIGR00874 talAB: transaldolase 3 317 1.0E-156 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_14305 b1a3cb0f1e1e1195762ad9c38bc8697a 319 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_14305 b1a3cb0f1e1e1195762ad9c38bc8697a 319 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 3.0E-105 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_14305 b1a3cb0f1e1e1195762ad9c38bc8697a 319 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMBLS11_14305 b1a3cb0f1e1e1195762ad9c38bc8697a 319 SUPERFAMILY SSF51569 1 317 6.87E-119 T 14-10-2018 AMBLS11_14305 b1a3cb0f1e1e1195762ad9c38bc8697a 319 Gene3D G3DSA:3.20.20.70 2 317 2.0E-143 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_07050 f23f2809861cddfe407d870c20636a1a 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 112 2.9E-30 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR AMBLS11_07050 f23f2809861cddfe407d870c20636a1a 115 Gene3D G3DSA:3.40.30.10 2 115 5.9E-40 T 14-10-2018 AMBLS11_07050 f23f2809861cddfe407d870c20636a1a 115 SUPERFAMILY SSF52833 4 114 4.81E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_07050 f23f2809861cddfe407d870c20636a1a 115 Pfam PF03960 ArsC family 6 113 7.7E-17 T 14-10-2018 IPR006660 Arsenate reductase-like AMBLS11_04430 bd470ec02df206a68404a0f836373b8b 353 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 10 350 2.8E-108 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AMBLS11_04430 bd470ec02df206a68404a0f836373b8b 353 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 25.392 T 14-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 AMBLS11_04430 bd470ec02df206a68404a0f836373b8b 353 Pfam PF00953 Glycosyl transferase family 4 75 233 2.1E-30 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AMBLS11_04430 bd470ec02df206a68404a0f836373b8b 353 ProSitePatterns PS01348 MraY family signature 2. 150 161 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_08500 49444f70203aff4a40478f700714bca4 205 Gene3D G3DSA:3.30.530.20 43 180 2.6E-11 T 14-10-2018 IPR023393 START-like domain superfamily AMBLS11_08500 49444f70203aff4a40478f700714bca4 205 SUPERFAMILY SSF55961 42 138 6.04E-9 T 14-10-2018 AMBLS11_01745 fb7d967f2be3b491279516aa6c238f90 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 4.5E-39 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMBLS11_01745 fb7d967f2be3b491279516aa6c238f90 110 Gene3D G3DSA:3.90.470.10 1 110 8.1E-46 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_01745 fb7d967f2be3b491279516aa6c238f90 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_01745 fb7d967f2be3b491279516aa6c238f90 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.9 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_01745 fb7d967f2be3b491279516aa6c238f90 110 SUPERFAMILY SSF54843 1 109 1.57E-43 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_01745 fb7d967f2be3b491279516aa6c238f90 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-48 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_04105 b404a20aba89545d0bdb1815bd252358 176 Gene3D G3DSA:1.20.1260.10 83 176 5.2E-10 T 14-10-2018 IPR012347 Ferritin-like AMBLS11_04105 b404a20aba89545d0bdb1815bd252358 176 Pfam PF03713 Domain of unknown function (DUF305) 92 153 1.3E-9 T 14-10-2018 IPR005183 Domain of unknown function DUF305 AMBLS11_09230 698db6e5632936374f7d5bd0b806c616 234 PRINTS PR00344 Bacterial sensor protein C-terminal signature 221 234 3.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_09230 698db6e5632936374f7d5bd0b806c616 234 PRINTS PR00344 Bacterial sensor protein C-terminal signature 160 174 3.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_09230 698db6e5632936374f7d5bd0b806c616 234 PRINTS PR00344 Bacterial sensor protein C-terminal signature 191 209 3.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_09230 698db6e5632936374f7d5bd0b806c616 234 Gene3D G3DSA:3.30.565.10 77 234 4.7E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_09230 698db6e5632936374f7d5bd0b806c616 234 Gene3D G3DSA:1.10.287.130 17 76 4.7E-20 T 14-10-2018 AMBLS11_09230 698db6e5632936374f7d5bd0b806c616 234 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 125 232 1.1E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_09230 698db6e5632936374f7d5bd0b806c616 234 SUPERFAMILY SSF47384 14 78 1.43E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_09230 698db6e5632936374f7d5bd0b806c616 234 SUPERFAMILY SSF55874 69 234 4.19E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_09140 a64b03a8f1fac3573aa5d960140ce166 280 PIRSF PIRSF028200 1 280 2.5E-66 T 14-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 AMBLS11_09010 6be8c6c7f6474b4a3ec7c92a35758e57 865 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 850 2.5E-240 T 14-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family AMBLS11_09010 6be8c6c7f6474b4a3ec7c92a35758e57 865 SUPERFAMILY SSF53474 460 785 5.24E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_09010 6be8c6c7f6474b4a3ec7c92a35758e57 865 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 274 3.4E-32 T 14-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain AMBLS11_09010 6be8c6c7f6474b4a3ec7c92a35758e57 865 Gene3D G3DSA:3.40.50.1820 473 653 7.0E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 SUPERFAMILY SSF53732 379 856 5.49E-148 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 SUPERFAMILY SSF74778 2 159 2.35E-66 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 PIRSF PIRSF036687 1 859 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 382 6.0E-94 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 SUPERFAMILY SSF52016 164 372 2.35E-68 T 14-10-2018 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.4E-65 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 Gene3D G3DSA:3.30.499.10 683 864 2.5E-64 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 Pfam PF00330 Aconitase family (aconitate hydratase) 471 818 4.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 Gene3D G3DSA:3.40.1060.10 385 681 8.1E-150 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 Gene3D G3DSA:3.20.19.10 162 361 1.1E-72 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 Gene3D G3DSA:1.25.40.310 1 160 1.0E-68 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AMBLS11_03325 8a2854b485cd94ae793a55108be8d618 870 Gene3D G3DSA:3.30.499.10 402 529 8.1E-150 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMBLS11_14890 b1bdc50bd7dfa7dee2a8d507dd069115 69 Gene3D G3DSA:1.10.1220.10 1 50 1.9E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMBLS11_14890 b1bdc50bd7dfa7dee2a8d507dd069115 69 SUPERFAMILY SSF47598 4 48 2.67E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMBLS11_10355 2b279aa12b2fe85d95cd3de42e4f11a5 200 Gene3D G3DSA:3.40.50.360 1 199 4.5E-57 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_10355 2b279aa12b2fe85d95cd3de42e4f11a5 200 SUPERFAMILY SSF52218 1 197 1.55E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_10355 2b279aa12b2fe85d95cd3de42e4f11a5 200 Pfam PF02525 Flavodoxin-like fold 2 195 2.0E-44 T 14-10-2018 IPR003680 Flavodoxin-like fold AMBLS11_10355 2b279aa12b2fe85d95cd3de42e4f11a5 200 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 198 28.337 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AMBLS11_09440 f5c151c453eef1ee2dce97ba7b28e266 512 Gene3D G3DSA:3.40.50.620 6 229 1.6E-122 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_09440 f5c151c453eef1ee2dce97ba7b28e266 512 Gene3D G3DSA:1.10.10.1710 443 512 1.9E-26 T 14-10-2018 AMBLS11_09440 f5c151c453eef1ee2dce97ba7b28e266 512 Gene3D G3DSA:1.10.579.10 322 442 2.1E-52 T 14-10-2018 AMBLS11_09440 f5c151c453eef1ee2dce97ba7b28e266 512 SUPERFAMILY SSF48173 229 490 3.66E-59 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMBLS11_09440 f5c151c453eef1ee2dce97ba7b28e266 512 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 227 1.7E-81 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AMBLS11_09440 f5c151c453eef1ee2dce97ba7b28e266 512 Gene3D G3DSA:1.25.40.80 132 318 1.6E-122 T 14-10-2018 AMBLS11_11875 b5f928ee65b6ccc27eae9436ac5c6f74 966 SUPERFAMILY SSF51126 557 877 8.07E-12 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_11875 b5f928ee65b6ccc27eae9436ac5c6f74 966 Gene3D G3DSA:2.160.20.10 553 920 7.8E-9 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Pfam PF08447 PAS fold 510 581 3.8E-8 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 SUPERFAMILY SSF55785 493 599 2.42E-11 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 605 761 2.1E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 479 1.4E-8 T 14-10-2018 IPR000014 PAS domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 239 358 5.2E-9 T 14-10-2018 IPR000014 PAS domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Pfam PF13188 PAS domain 239 275 2.9E-5 T 14-10-2018 IPR000014 PAS domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 SUPERFAMILY SSF55073 612 763 3.69E-38 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 607 761 1.2E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 SUPERFAMILY SSF55785 238 350 1.92E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 SMART SM00267 596 761 1.8E-43 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 SMART SM00091 239 307 0.0025 T 14-10-2018 IPR000014 PAS domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 SMART SM00091 486 554 6.1 T 14-10-2018 IPR000014 PAS domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 SMART SM00091 359 426 1.3 T 14-10-2018 IPR000014 PAS domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 SUPERFAMILY SSF55785 364 477 3.32E-11 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Pfam PF03707 Bacterial signalling protein N terminal repeat 51 92 9.8E-15 T 14-10-2018 IPR005330 MHYT domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Pfam PF03707 Bacterial signalling protein N terminal repeat 177 234 8.1E-7 T 14-10-2018 IPR005330 MHYT domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Pfam PF03707 Bacterial signalling protein N terminal repeat 111 155 2.8E-12 T 14-10-2018 IPR005330 MHYT domain AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Pfam PF08448 PAS fold 365 473 2.6E-10 T 14-10-2018 IPR013656 PAS fold-4 AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Gene3D G3DSA:3.30.450.20 354 483 5.4E-16 T 14-10-2018 AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Gene3D G3DSA:3.30.450.20 235 353 8.6E-13 T 14-10-2018 AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Gene3D G3DSA:3.30.450.20 484 592 2.0E-16 T 14-10-2018 AMBLS11_08100 caa58ba36d472c4aeb6ecafc5f10f15e 763 Gene3D G3DSA:3.30.70.270 600 763 3.0E-45 T 14-10-2018 AMBLS11_02050 bdb5ba23a8e949761c2a555d708b6fd4 328 Pfam PF14321 Domain of unknown function (DUF4382) 50 189 1.9E-25 T 14-10-2018 IPR025491 Domain of unknown function DUF4382 AMBLS11_05080 06612b607acf8a31a194e3e89fbc142d 268 PIRSF PIRSF020479 3 267 9.9E-82 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like AMBLS11_05080 06612b607acf8a31a194e3e89fbc142d 268 SMART SM00260 112 254 2.0E-5 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_05080 06612b607acf8a31a194e3e89fbc142d 268 Pfam PF01584 CheW-like domain 123 256 1.9E-15 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_05080 06612b607acf8a31a194e3e89fbc142d 268 Gene3D G3DSA:2.30.30.40 126 248 2.0E-6 T 14-10-2018 AMBLS11_05080 06612b607acf8a31a194e3e89fbc142d 268 SUPERFAMILY SSF50341 122 257 3.27E-17 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMBLS11_05080 06612b607acf8a31a194e3e89fbc142d 268 Gene3D G3DSA:2.40.50.180 140 253 2.0E-6 T 14-10-2018 AMBLS11_12650 e1f1abda0dea93eec2955c6ad450366f 155 Gene3D G3DSA:2.40.10.330 75 131 3.7E-41 T 14-10-2018 AMBLS11_12650 e1f1abda0dea93eec2955c6ad450366f 155 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 10 143 6.4E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMBLS11_12650 e1f1abda0dea93eec2955c6ad450366f 155 Gene3D G3DSA:3.10.50.40 16 144 3.7E-41 T 14-10-2018 AMBLS11_12650 e1f1abda0dea93eec2955c6ad450366f 155 SUPERFAMILY SSF54534 9 146 1.67E-35 T 14-10-2018 AMBLS11_16965 2a577efb72b311d569309b20c973397b 258 Pfam PF11932 Protein of unknown function (DUF3450) 12 250 1.4E-26 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AMBLS11_03235 0c19c5ee7c01a887efec1108c5a021a2 252 PIRSF PIRSF028069 1 252 1.9E-86 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AMBLS11_03235 0c19c5ee7c01a887efec1108c5a021a2 252 Pfam PF11932 Protein of unknown function (DUF3450) 8 248 6.1E-96 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AMBLS11_12710 31467df5f3da2f2fdad66bb3e03e680e 595 SUPERFAMILY SSF69593 91 286 1.24E-15 T 14-10-2018 AMBLS11_12710 31467df5f3da2f2fdad66bb3e03e680e 595 SMART SM00563 104 221 2.3E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_12710 31467df5f3da2f2fdad66bb3e03e680e 595 Pfam PF01553 Acyltransferase 93 218 1.2E-11 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_12710 31467df5f3da2f2fdad66bb3e03e680e 595 Pfam PF13444 Acetyltransferase (GNAT) domain 347 447 9.4E-23 T 14-10-2018 AMBLS11_12710 31467df5f3da2f2fdad66bb3e03e680e 595 SUPERFAMILY SSF55729 329 485 3.6E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_16670 dc6d31254fe8af8ecf801e9d5b28c091 157 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 14 150 2.6E-61 T 14-10-2018 IPR021679 Toxin endonuclease, YhaV GO:0004540|GO:0110001 AMBLS11_18310 da595a8653aba095e8513404941eb07f 187 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMBLS11_18310 da595a8653aba095e8513404941eb07f 187 SUPERFAMILY SSF55811 5 185 8.53E-41 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_18310 da595a8653aba095e8513404941eb07f 187 Pfam PF00293 NUDIX domain 50 162 2.0E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMBLS11_18310 da595a8653aba095e8513404941eb07f 187 Gene3D G3DSA:3.90.79.10 11 187 3.1E-51 T 14-10-2018 AMBLS11_09560 47cf75334c0264b02f454e8368686ad5 317 Pfam PF01171 PP-loop family 50 213 1.7E-15 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AMBLS11_09560 47cf75334c0264b02f454e8368686ad5 317 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 19 280 57.63 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 AMBLS11_09560 47cf75334c0264b02f454e8368686ad5 317 SUPERFAMILY SSF52402 26 244 1.9E-55 T 14-10-2018 AMBLS11_09560 47cf75334c0264b02f454e8368686ad5 317 PIRSF PIRSF004976 6 279 5.6E-76 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AMBLS11_09560 47cf75334c0264b02f454e8368686ad5 317 Gene3D G3DSA:3.40.50.620 9 280 2.6E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_04150 ac6fb4ee7d9272984c764bae58d10c53 236 Pfam PF04172 LrgB-like family 20 232 1.5E-67 T 14-10-2018 IPR007300 CidB/LrgB family AMBLS11_17815 47f1162aba2702c18397ebe1b528a134 382 Pfam PF00144 Beta-lactamase 39 360 6.3E-44 T 14-10-2018 IPR001466 Beta-lactamase-related AMBLS11_17815 47f1162aba2702c18397ebe1b528a134 382 SUPERFAMILY SSF56601 36 376 6.32E-63 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMBLS11_17815 47f1162aba2702c18397ebe1b528a134 382 Gene3D G3DSA:3.40.710.10 31 372 4.2E-62 T 14-10-2018 AMBLS11_18360 f5c0e6e8341b6a283486ce892acf17e8 68 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 5 62 1.3E-25 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AMBLS11_18360 f5c0e6e8341b6a283486ce892acf17e8 68 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 61 7.3E-19 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AMBLS11_10105 4be53b90439128cc1bb12ddf0f5dbde5 321 SUPERFAMILY SSF53686 4 308 1.06E-97 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMBLS11_10105 4be53b90439128cc1bb12ddf0f5dbde5 321 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMBLS11_10105 4be53b90439128cc1bb12ddf0f5dbde5 321 Gene3D G3DSA:3.40.50.1100 42 144 2.4E-124 T 14-10-2018 AMBLS11_10105 4be53b90439128cc1bb12ddf0f5dbde5 321 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 296 2.0E-72 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMBLS11_10105 4be53b90439128cc1bb12ddf0f5dbde5 321 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 310 1.8E-139 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AMBLS11_10105 4be53b90439128cc1bb12ddf0f5dbde5 321 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 310 1.8E-132 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AMBLS11_10105 4be53b90439128cc1bb12ddf0f5dbde5 321 Gene3D G3DSA:3.40.50.1100 11 305 2.4E-124 T 14-10-2018 AMBLS11_03625 dbc58a8d951f17a4035ccface7dbe134 266 Pfam PF00005 ABC transporter 21 169 1.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_03625 dbc58a8d951f17a4035ccface7dbe134 266 Gene3D G3DSA:3.40.50.300 1 249 4.0E-63 T 14-10-2018 AMBLS11_03625 dbc58a8d951f17a4035ccface7dbe134 266 SMART SM00382 29 224 4.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_03625 dbc58a8d951f17a4035ccface7dbe134 266 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_03625 dbc58a8d951f17a4035ccface7dbe134 266 SUPERFAMILY SSF52540 4 234 4.24E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10180 634f152d057ce4851fe58eab930d9c5d 125 Pfam PF02371 Transposase IS116/IS110/IS902 family 1 40 8.8E-10 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMBLS11_15735 48bef600a02c134dd58b17a0b8516646 807 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 540 782 7.4E-39 T 14-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 AMBLS11_15735 48bef600a02c134dd58b17a0b8516646 807 Gene3D G3DSA:1.25.40.10 129 406 3.7E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_15735 48bef600a02c134dd58b17a0b8516646 807 SUPERFAMILY SSF48452 160 369 2.44E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_15675 1c214755a36eddd7b3d88d2245836b95 316 Gene3D G3DSA:3.40.50.720 45 314 4.1E-42 T 14-10-2018 AMBLS11_15675 1c214755a36eddd7b3d88d2245836b95 316 SUPERFAMILY SSF51735 70 310 1.92E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15675 1c214755a36eddd7b3d88d2245836b95 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 132 233 4.1E-6 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMBLS11_06130 ba91339cb5191ce5e215910e6639e21b 132 PIRSF PIRSF003230 1 132 8.8E-46 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMBLS11_06130 ba91339cb5191ce5e215910e6639e21b 132 SUPERFAMILY SSF54637 2 125 4.67E-38 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_06130 ba91339cb5191ce5e215910e6639e21b 132 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 2 125 2.7E-49 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AMBLS11_06130 ba91339cb5191ce5e215910e6639e21b 132 Gene3D G3DSA:3.10.129.10 1 131 1.0E-40 T 14-10-2018 AMBLS11_06130 ba91339cb5191ce5e215910e6639e21b 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 120 1.3E-37 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMBLS11_06130 ba91339cb5191ce5e215910e6639e21b 132 Pfam PF03061 Thioesterase superfamily 16 99 9.6E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMBLS11_04840 7c57334b276022d8f909c50a9fa10e54 320 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 118 4.9E-14 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMBLS11_04840 7c57334b276022d8f909c50a9fa10e54 320 Gene3D G3DSA:3.40.50.720 1 116 5.2E-20 T 14-10-2018 AMBLS11_04840 7c57334b276022d8f909c50a9fa10e54 320 SUPERFAMILY SSF55347 123 299 1.54E-20 T 14-10-2018 AMBLS11_04840 7c57334b276022d8f909c50a9fa10e54 320 SUPERFAMILY SSF51735 1 166 3.69E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04840 7c57334b276022d8f909c50a9fa10e54 320 Gene3D G3DSA:3.30.360.10 120 320 3.9E-28 T 14-10-2018 AMBLS11_05820 36b3c85f49cfd65ab5fd777cb5162c23 185 Gene3D G3DSA:1.10.10.10 112 176 3.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05820 36b3c85f49cfd65ab5fd777cb5162c23 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 173 3.2E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_05820 36b3c85f49cfd65ab5fd777cb5162c23 185 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 48 79 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_05820 36b3c85f49cfd65ab5fd777cb5162c23 185 SUPERFAMILY SSF88946 21 111 1.96E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05820 36b3c85f49cfd65ab5fd777cb5162c23 185 Pfam PF04542 Sigma-70 region 2 26 92 3.9E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_05820 36b3c85f49cfd65ab5fd777cb5162c23 185 Pfam PF08281 Sigma-70, region 4 117 169 1.1E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_05820 36b3c85f49cfd65ab5fd777cb5162c23 185 SUPERFAMILY SSF88659 113 174 1.68E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_05820 36b3c85f49cfd65ab5fd777cb5162c23 185 Gene3D G3DSA:1.10.1740.10 4 88 2.8E-18 T 14-10-2018 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 389 6.3E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 SUPERFAMILY SSF53901 6 268 1.1E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.1E-46 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 Gene3D G3DSA:3.40.47.10 126 387 3.2E-143 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 Gene3D G3DSA:3.40.47.10 8 274 3.2E-143 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 Pfam PF00108 Thiolase, N-terminal domain 6 260 4.8E-87 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 SUPERFAMILY SSF53901 270 390 7.21E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07660 6c4aba88162213d98bbbc9572b5fd6cf 391 PIRSF PIRSF000429 1 391 4.3E-115 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMBLS11_19025 52e6d0415296249ddde79dd954916b9a 119 Gene3D G3DSA:3.30.230.10 2 118 4.9E-38 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_19025 52e6d0415296249ddde79dd954916b9a 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AMBLS11_19025 52e6d0415296249ddde79dd954916b9a 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 38 107 7.0E-22 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMBLS11_19025 52e6d0415296249ddde79dd954916b9a 119 Pfam PF00825 Ribonuclease P 6 112 1.9E-28 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMBLS11_19025 52e6d0415296249ddde79dd954916b9a 119 SUPERFAMILY SSF54211 6 114 3.79E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_19025 52e6d0415296249ddde79dd954916b9a 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 16.67 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMBLS11_19025 52e6d0415296249ddde79dd954916b9a 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 7.4E-27 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 Gene3D G3DSA:3.10.50.30 76 158 5.9E-32 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 Gene3D G3DSA:1.10.287.180 1 75 8.2E-31 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 SUPERFAMILY SSF54534 82 157 7.72E-25 T 14-10-2018 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.6E-30 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 SUPERFAMILY SSF46557 3 78 7.46E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.5E-29 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.667 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 PIRSF PIRSF006092 1 158 5.5E-54 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMBLS11_06715 ac36ef2b7cf8d49dc13de435ae099e59 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.1E-59 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AMBLS11_00810 a6c42a08bbbaf64c3aadfdbea474e17e 170 Pfam PF01569 PAP2 superfamily 59 166 1.0E-22 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMBLS11_00810 a6c42a08bbbaf64c3aadfdbea474e17e 170 Gene3D G3DSA:1.20.144.10 56 166 9.9E-21 T 14-10-2018 AMBLS11_00810 a6c42a08bbbaf64c3aadfdbea474e17e 170 SUPERFAMILY SSF48317 4 168 1.57E-41 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMBLS11_00810 a6c42a08bbbaf64c3aadfdbea474e17e 170 SMART SM00014 57 166 9.4E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMBLS11_12085 0d7f7156ef9f5c382756ce253c790447 251 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 32 248 6.5E-68 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AMBLS11_12085 0d7f7156ef9f5c382756ce253c790447 251 Gene3D G3DSA:3.60.140.10 6 251 4.5E-79 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AMBLS11_12085 0d7f7156ef9f5c382756ce253c790447 251 SUPERFAMILY SSF64438 15 249 1.37E-75 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMBLS11_12085 0d7f7156ef9f5c382756ce253c790447 251 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 43 249 4.1E-55 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AMBLS11_10875 c93fe1b43e1372d2d0f8de6a1df2bdab 201 PIRSF PIRSF033239 2 200 1.9E-47 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AMBLS11_10875 c93fe1b43e1372d2d0f8de6a1df2bdab 201 Pfam PF06055 Exopolysaccharide synthesis, ExoD 14 191 2.9E-43 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AMBLS11_14170 a1c137b48922a3fd32a03b47501f9a19 600 Gene3D G3DSA:1.20.5.320 24 67 5.6E-7 T 14-10-2018 AMBLS11_14170 a1c137b48922a3fd32a03b47501f9a19 600 SUPERFAMILY SSF63825 73 307 1.96E-10 T 14-10-2018 AMBLS11_14170 a1c137b48922a3fd32a03b47501f9a19 600 Gene3D G3DSA:2.130.10.10 68 322 1.2E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_11880 48e71d7cdd3aaf03f13506c16ce0087b 281 Gene3D G3DSA:1.20.1080.10 29 280 3.2E-29 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMBLS11_11880 48e71d7cdd3aaf03f13506c16ce0087b 281 Pfam PF01226 Formate/nitrite transporter 39 272 6.6E-33 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_12235 5de928f3906a55059cf7636bcf736269 327 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 122 292 7.7E-28 T 14-10-2018 AMBLS11_12235 5de928f3906a55059cf7636bcf736269 327 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 109 324 3.1E-79 T 14-10-2018 AMBLS11_12235 5de928f3906a55059cf7636bcf736269 327 Pfam PF12710 haloacid dehalogenase-like hydrolase 124 290 1.3E-15 T 14-10-2018 AMBLS11_12235 5de928f3906a55059cf7636bcf736269 327 SUPERFAMILY SSF56784 122 325 1.76E-47 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_12235 5de928f3906a55059cf7636bcf736269 327 Gene3D G3DSA:3.40.50.1000 34 327 2.5E-74 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_13790 f266430585e2010c51a8c9dd1cbbdf52 504 Pfam PF04820 Tryptophan halogenase 7 484 5.0E-121 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMBLS11_13790 f266430585e2010c51a8c9dd1cbbdf52 504 PIRSF PIRSF011396 1 503 1.0E-138 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AMBLS11_13790 f266430585e2010c51a8c9dd1cbbdf52 504 Gene3D G3DSA:3.50.50.60 1 503 2.2E-162 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_13790 f266430585e2010c51a8c9dd1cbbdf52 504 SUPERFAMILY SSF51905 7 442 6.64E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_04750 f10e6412d07567e87594106cce3c21f1 226 Pfam PF02107 Flagellar L-ring protein 45 225 3.4E-62 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMBLS11_04750 f10e6412d07567e87594106cce3c21f1 226 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 223 27.229 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMBLS11_04750 f10e6412d07567e87594106cce3c21f1 226 PRINTS PR01008 Flagellar L-ring protein signature 139 154 6.1E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMBLS11_04750 f10e6412d07567e87594106cce3c21f1 226 PRINTS PR01008 Flagellar L-ring protein signature 186 200 6.1E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMBLS11_04750 f10e6412d07567e87594106cce3c21f1 226 PRINTS PR01008 Flagellar L-ring protein signature 66 78 6.1E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMBLS11_04750 f10e6412d07567e87594106cce3c21f1 226 PRINTS PR01008 Flagellar L-ring protein signature 202 216 6.1E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMBLS11_04750 f10e6412d07567e87594106cce3c21f1 226 PRINTS PR01008 Flagellar L-ring protein signature 165 181 6.1E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMBLS11_00355 7242f84b69ac0469cb5a945015942129 82 Pfam PF11173 Protein of unknown function (DUF2960) 1 79 7.1E-36 T 14-10-2018 IPR021343 Protein of unknown function DUF2960 AMBLS11_04435 627728aabb046133935d1163bf182359 295 Gene3D G3DSA:3.90.550.10 3 262 4.8E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04435 627728aabb046133935d1163bf182359 295 Pfam PF00535 Glycosyl transferase family 2 21 155 1.4E-12 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_04435 627728aabb046133935d1163bf182359 295 SUPERFAMILY SSF53448 21 294 4.5E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07585 775d785cd85f5a593238f9e4d9200177 130 Pfam PF02657 Fe-S metabolism associated domain 13 129 1.4E-28 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AMBLS11_07585 775d785cd85f5a593238f9e4d9200177 130 SUPERFAMILY SSF82649 10 129 5.75E-24 T 14-10-2018 AMBLS11_07585 775d785cd85f5a593238f9e4d9200177 130 Gene3D G3DSA:3.90.1010.10 1 130 6.0E-28 T 14-10-2018 AMBLS11_09375 a1f7191b627ec4b71dc37a1fbb0e41ce 772 Gene3D G3DSA:1.20.1640.10 204 392 5.8E-7 T 14-10-2018 AMBLS11_09375 a1f7191b627ec4b71dc37a1fbb0e41ce 772 Gene3D G3DSA:1.20.1640.10 587 770 1.1E-12 T 14-10-2018 AMBLS11_09375 a1f7191b627ec4b71dc37a1fbb0e41ce 772 SUPERFAMILY SSF82866 565 765 7.59E-32 T 14-10-2018 AMBLS11_09375 a1f7191b627ec4b71dc37a1fbb0e41ce 772 SUPERFAMILY SSF82866 181 377 1.06E-26 T 14-10-2018 AMBLS11_09375 a1f7191b627ec4b71dc37a1fbb0e41ce 772 Pfam PF03176 MMPL family 143 411 4.8E-11 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMBLS11_09375 a1f7191b627ec4b71dc37a1fbb0e41ce 772 Pfam PF03176 MMPL family 467 762 1.0E-16 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMBLS11_08640 173f9fee9a7939f606092fe4b1d6ca8e 97 SUPERFAMILY SSF158757 1 77 6.41E-36 T 14-10-2018 IPR036810 SMc04008-like superfamily AMBLS11_08640 173f9fee9a7939f606092fe4b1d6ca8e 97 Gene3D G3DSA:1.10.3340.10 1 97 8.7E-45 T 14-10-2018 IPR036810 SMc04008-like superfamily AMBLS11_08640 173f9fee9a7939f606092fe4b1d6ca8e 97 Pfam PF06844 Protein of unknown function (DUF1244) 27 92 3.7E-35 T 14-10-2018 IPR023163 SMc04008-like domain AMBLS11_03115 d3c3027fb192ef92c4fc9c82a26afc57 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 5.6E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_03115 d3c3027fb192ef92c4fc9c82a26afc57 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 305 334 5.6E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_03115 d3c3027fb192ef92c4fc9c82a26afc57 539 Gene3D G3DSA:1.10.287.950 208 539 6.1E-73 T 14-10-2018 AMBLS11_03115 d3c3027fb192ef92c4fc9c82a26afc57 539 SMART SM00304 208 262 1.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_03115 d3c3027fb192ef92c4fc9c82a26afc57 539 SUPERFAMILY SSF58104 230 539 1.7E-81 T 14-10-2018 AMBLS11_03115 d3c3027fb192ef92c4fc9c82a26afc57 539 SMART SM00283 277 538 1.8E-81 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_03115 d3c3027fb192ef92c4fc9c82a26afc57 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 504 2.1E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_00170 33fd1749137b3d910fde3e8b569e43bd 176 PIRSF PIRSF029681 1 176 1.7E-43 T 14-10-2018 IPR018550 Lipid A 3-O-deacylase-related AMBLS11_00170 33fd1749137b3d910fde3e8b569e43bd 176 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 40 175 3.2E-30 T 14-10-2018 IPR018550 Lipid A 3-O-deacylase-related AMBLS11_00170 33fd1749137b3d910fde3e8b569e43bd 176 Gene3D G3DSA:2.40.160.20 35 175 1.3E-35 T 14-10-2018 AMBLS11_08285 3f1453307019f61449d6b88fff6aa7bc 154 SUPERFAMILY SSF54427 91 151 2.44E-5 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_08285 3f1453307019f61449d6b88fff6aa7bc 154 Gene3D G3DSA:3.10.450.50 2 154 7.5E-15 T 14-10-2018 AMBLS11_08285 3f1453307019f61449d6b88fff6aa7bc 154 PIRSF PIRSF028288 1 154 4.9E-47 T 14-10-2018 IPR016878 Uncharacterised conserved protein UCP028288 AMBLS11_00460 3a29dec222bf4d6468d10609356ab6df 376 Pfam PF05128 Domain of unknown function (DUF697) 249 375 4.3E-22 T 14-10-2018 IPR021147 Protein of unknown function DUF697 AMBLS11_11430 3bb60bb619a540bcdde8d02fcc32b1e1 312 Pfam PF03466 LysR substrate binding domain 90 293 9.0E-38 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_11430 3bb60bb619a540bcdde8d02fcc32b1e1 312 Gene3D G3DSA:1.10.10.10 1 87 3.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11430 3bb60bb619a540bcdde8d02fcc32b1e1 312 Gene3D G3DSA:3.40.190.290 90 291 1.9E-50 T 14-10-2018 AMBLS11_11430 3bb60bb619a540bcdde8d02fcc32b1e1 312 SUPERFAMILY SSF53850 89 296 4.52E-39 T 14-10-2018 AMBLS11_11430 3bb60bb619a540bcdde8d02fcc32b1e1 312 SUPERFAMILY SSF46785 4 111 2.07E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_11430 3bb60bb619a540bcdde8d02fcc32b1e1 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.9E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_15680 49197ba10f7bfed9cbe516f4c5445b2f 473 Pfam PF00209 Sodium:neurotransmitter symporter family 5 124 3.7E-24 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_15680 49197ba10f7bfed9cbe516f4c5445b2f 473 Pfam PF00209 Sodium:neurotransmitter symporter family 145 463 6.5E-24 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_15680 49197ba10f7bfed9cbe516f4c5445b2f 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 1.6E-5 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_15680 49197ba10f7bfed9cbe516f4c5445b2f 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 1.6E-5 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_15680 49197ba10f7bfed9cbe516f4c5445b2f 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.6E-5 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_15680 49197ba10f7bfed9cbe516f4c5445b2f 473 SUPERFAMILY SSF161070 5 463 5.49E-111 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AMBLS11_11125 ce81fa3f7558902014dd07daa3281379 281 Gene3D G3DSA:2.60.120.10 15 266 3.8E-114 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_11125 ce81fa3f7558902014dd07daa3281379 281 Gene3D G3DSA:2.60.120.520 34 147 3.8E-114 T 14-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AMBLS11_11125 ce81fa3f7558902014dd07daa3281379 281 Pfam PF04962 KduI/IolB family 42 269 4.2E-31 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AMBLS11_11125 ce81fa3f7558902014dd07daa3281379 281 PIRSF PIRSF006625 5 281 2.8E-124 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AMBLS11_11125 ce81fa3f7558902014dd07daa3281379 281 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 5 281 52.124 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AMBLS11_11125 ce81fa3f7558902014dd07daa3281379 281 SUPERFAMILY SSF51182 6 265 3.32E-98 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_03010 4e5f04727889b126d4366ea67de67b47 331 SUPERFAMILY SSF161098 115 314 1.3E-23 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_03010 4e5f04727889b126d4366ea67de67b47 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 139 322 8.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMBLS11_03010 4e5f04727889b126d4366ea67de67b47 331 Gene3D G3DSA:1.10.3720.10 114 321 1.4E-22 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_06375 ec708308291781984334e70530122219 447 Gene3D G3DSA:3.20.20.70 175 446 4.0E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_06375 ec708308291781984334e70530122219 447 SUPERFAMILY SSF51569 3 445 1.03E-200 T 14-10-2018 AMBLS11_06375 ec708308291781984334e70530122219 447 Pfam PF01474 Class-II DAHP synthetase family 4 441 1.8E-206 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMBLS11_06375 ec708308291781984334e70530122219 447 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 446 1.4E-215 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMBLS11_07605 bcf329d4fc3285f70d76d4a0e65120ce 440 Gene3D G3DSA:1.20.1250.20 221 429 1.7E-19 T 14-10-2018 AMBLS11_07605 bcf329d4fc3285f70d76d4a0e65120ce 440 SUPERFAMILY SSF103473 11 426 5.89E-68 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_07605 bcf329d4fc3285f70d76d4a0e65120ce 440 Pfam PF07690 Major Facilitator Superfamily 29 379 6.5E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_07605 bcf329d4fc3285f70d76d4a0e65120ce 440 Gene3D G3DSA:1.20.1250.20 15 218 7.5E-43 T 14-10-2018 AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 Pfam PF13360 PQQ-like domain 481 549 2.0E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 Pfam PF13360 PQQ-like domain 81 242 1.4E-18 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 SUPERFAMILY SSF50998 45 590 2.62E-158 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 SMART SM00564 192 229 0.0076 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 SMART SM00564 97 129 4.7E-5 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 SMART SM00564 146 178 9.2E-5 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 SMART SM00564 456 498 0.22 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 SMART SM00564 507 539 13.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 SMART SM00564 275 323 23.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 35 567 3.6E-236 T 14-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 AMBLS11_15210 5ae58ca43f016316a3c21d938e8010d1 604 Gene3D G3DSA:2.140.10.10 35 597 2.1E-208 T 14-10-2018 AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 Gene3D G3DSA:3.40.50.2300 1 121 3.1E-7 T 14-10-2018 AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 SUPERFAMILY SSF52172 127 258 1.99E-14 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 SUPERFAMILY SSF52172 4 120 2.28E-8 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 408 5.1E-35 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 SUPERFAMILY SSF55073 262 411 1.33E-37 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 Pfam PF00072 Response regulator receiver domain 128 231 7.9E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 Gene3D G3DSA:3.40.50.2300 122 250 1.5E-11 T 14-10-2018 AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 SMART SM00267 246 412 9.8E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 411 7.0E-40 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 Gene3D G3DSA:3.30.70.270 251 414 8.3E-46 T 14-10-2018 AMBLS11_00755 ae2ef20e6879aad72c16b0d73b2948b2 425 SMART SM00448 126 240 3.8E-4 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_05325 79b734e3af65b01759811df21434aa4f 452 PIRSF PIRSF037714 1 452 2.5E-177 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AMBLS11_05325 79b734e3af65b01759811df21434aa4f 452 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 435 6.2E-28 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMBLS11_16375 966803805693c8b94dda8f8341799c0d 59 SUPERFAMILY SSF55129 1 58 4.97E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMBLS11_16375 966803805693c8b94dda8f8341799c0d 59 Gene3D G3DSA:3.30.1390.20 1 58 1.7E-25 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMBLS11_16375 966803805693c8b94dda8f8341799c0d 59 PIRSF PIRSF002211 1 59 2.8E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16375 966803805693c8b94dda8f8341799c0d 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 20.502 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16375 966803805693c8b94dda8f8341799c0d 59 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 8.2E-20 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMBLS11_16375 966803805693c8b94dda8f8341799c0d 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site AMBLS11_16375 966803805693c8b94dda8f8341799c0d 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.0E-25 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 SMART SM00926 6 60 2.1E-14 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 Gene3D G3DSA:2.40.40.20 609 748 3.4E-30 T 14-10-2018 AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 Gene3D G3DSA:3.40.228.10 153 351 9.1E-98 T 14-10-2018 AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 Pfam PF01568 Molydopterin dinucleotide binding domain 622 740 1.7E-23 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 SUPERFAMILY SSF50692 621 747 2.49E-32 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 SUPERFAMILY SSF53706 8 502 4.97E-120 T 14-10-2018 AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 Pfam PF00384 Molybdopterin oxidoreductase 63 498 1.1E-38 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 Gene3D G3DSA:3.40.50.740 88 500 9.1E-98 T 14-10-2018 AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 Gene3D G3DSA:2.20.25.90 2 65 4.0E-16 T 14-10-2018 AMBLS11_16615 81afb165a42dc21d9940c7127b4e8c1c 748 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 10 54 3.5E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMBLS11_14055 af68694d40d0ff4e211451cbd614dd7c 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.258 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_14055 af68694d40d0ff4e211451cbd614dd7c 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.4E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_14055 af68694d40d0ff4e211451cbd614dd7c 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_14055 af68694d40d0ff4e211451cbd614dd7c 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 1.9E-145 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_14055 af68694d40d0ff4e211451cbd614dd7c 360 Pfam PF00953 Glycosyl transferase family 4 99 283 8.7E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AMBLS11_14055 af68694d40d0ff4e211451cbd614dd7c 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_05210 d5cbb1c6bb93d0cc222d1741cbc18d48 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 256 6.0E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMBLS11_05210 d5cbb1c6bb93d0cc222d1741cbc18d48 257 SUPERFAMILY SSF161098 50 238 7.72E-24 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_05210 d5cbb1c6bb93d0cc222d1741cbc18d48 257 Gene3D G3DSA:1.10.3720.10 46 254 6.6E-19 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_01460 3d7cb62191c43dd601953e58f0e97695 243 Gene3D G3DSA:3.40.30.10 10 78 3.5E-9 T 14-10-2018 AMBLS11_01460 3d7cb62191c43dd601953e58f0e97695 243 PRINTS PR00160 Glutaredoxin signature 9 27 6.4E-5 T 14-10-2018 IPR014025 Glutaredoxin subgroup AMBLS11_01460 3d7cb62191c43dd601953e58f0e97695 243 PRINTS PR00160 Glutaredoxin signature 50 63 6.4E-5 T 14-10-2018 IPR014025 Glutaredoxin subgroup AMBLS11_01460 3d7cb62191c43dd601953e58f0e97695 243 PRINTS PR00160 Glutaredoxin signature 64 77 6.4E-5 T 14-10-2018 IPR014025 Glutaredoxin subgroup AMBLS11_01460 3d7cb62191c43dd601953e58f0e97695 243 SUPERFAMILY SSF52833 4 81 1.36E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_00630 e31290d2f62713c79a46acfe1ff614e1 514 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 509 3.4E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00630 e31290d2f62713c79a46acfe1ff614e1 514 SMART SM00267 339 511 1.7E-35 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00630 e31290d2f62713c79a46acfe1ff614e1 514 Gene3D G3DSA:3.30.70.270 348 512 4.1E-43 T 14-10-2018 AMBLS11_00630 e31290d2f62713c79a46acfe1ff614e1 514 Pfam PF07695 7TM diverse intracellular signalling 134 334 1.2E-14 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AMBLS11_00630 e31290d2f62713c79a46acfe1ff614e1 514 SUPERFAMILY SSF55073 358 507 1.1E-37 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_00630 e31290d2f62713c79a46acfe1ff614e1 514 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 507 4.2E-36 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_04195 df0f02ed314337981137b99858da3b40 344 SMART SM00320 123 166 120.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_04195 df0f02ed314337981137b99858da3b40 344 SMART SM00320 250 291 490.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_04195 df0f02ed314337981137b99858da3b40 344 SMART SM00320 294 336 71.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_04195 df0f02ed314337981137b99858da3b40 344 SMART SM00320 168 206 8.3 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_04195 df0f02ed314337981137b99858da3b40 344 SMART SM00320 37 76 9.6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMBLS11_04195 df0f02ed314337981137b99858da3b40 344 Gene3D G3DSA:2.130.10.10 26 267 2.6E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_04195 df0f02ed314337981137b99858da3b40 344 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 193 207 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMBLS11_04195 df0f02ed314337981137b99858da3b40 344 Gene3D G3DSA:2.130.10.10 269 343 1.4E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_04195 df0f02ed314337981137b99858da3b40 344 SUPERFAMILY SSF50998 35 338 1.18E-27 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMBLS11_11905 29a7c73579928d0116c2ea62397c5521 131 Gene3D G3DSA:1.20.120.550 3 130 2.3E-28 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMBLS11_11905 29a7c73579928d0116c2ea62397c5521 131 SUPERFAMILY SSF161084 3 128 1.96E-29 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMBLS11_11905 29a7c73579928d0116c2ea62397c5521 131 Pfam PF01124 MAPEG family 6 124 3.7E-27 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMBLS11_18465 af0d4165a39896f09d4cf6228b11a7e8 326 Gene3D G3DSA:3.20.20.100 1 316 2.1E-75 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_18465 af0d4165a39896f09d4cf6228b11a7e8 326 SUPERFAMILY SSF51430 1 318 2.88E-73 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_18465 af0d4165a39896f09d4cf6228b11a7e8 326 Pfam PF00248 Aldo/keto reductase family 15 313 2.9E-61 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.9E-35 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.9E-35 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.9E-35 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.9E-35 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.9E-35 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00097 Anthranilate synthase component II signature 168 181 5.9E-35 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 Gene3D G3DSA:3.40.50.880 1 192 5.1E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 Pfam PF00117 Glutamine amidotransferase class-I 3 189 5.7E-51 T 14-10-2018 IPR017926 Glutamine amidotransferase AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 190 5.3E-76 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 SUPERFAMILY SSF52317 2 190 2.47E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.0E-5 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.0E-5 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.3E-13 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 1.3E-13 T 14-10-2018 AMBLS11_01965 8bb6381c8c9f1e757489b199ea0e9fa7 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.3E-13 T 14-10-2018 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 619 636 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 SUPERFAMILY SSF51230 589 661 1.03E-18 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.9E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 SUPERFAMILY SSF51246 331 449 6.28E-41 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 SUPERFAMILY SSF56059 83 347 7.95E-68 T 14-10-2018 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 SUPERFAMILY SSF52440 1 113 1.15E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 Gene3D G3DSA:2.40.50.100 598 663 5.7E-19 T 14-10-2018 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 6.6E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 Pfam PF00364 Biotin-requiring enzyme 597 660 3.5E-13 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 Gene3D G3DSA:3.30.470.130 1 451 7.6E-198 T 14-10-2018 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 SMART SM00878 336 443 4.2E-56 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 2.2E-73 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_07635 8c5cd17be5649dfb730afc90a9dcf734 670 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_01100 e47c51244a1477bf3994d447e7b07079 90 SUPERFAMILY SSF111148 1 89 3.01E-40 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AMBLS11_01100 e47c51244a1477bf3994d447e7b07079 90 Gene3D G3DSA:1.10.3880.10 1 90 2.0E-39 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AMBLS11_01100 e47c51244a1477bf3994d447e7b07079 90 PIRSF PIRSF029827 1 90 1.2E-43 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AMBLS11_01100 e47c51244a1477bf3994d447e7b07079 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.6E-43 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AMBLS11_01100 e47c51244a1477bf3994d447e7b07079 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-32 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AMBLS11_01100 e47c51244a1477bf3994d447e7b07079 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.549 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AMBLS11_03735 f890aadb781d77b299b6282f10718929 320 Pfam PF00892 EamA-like transporter family 168 299 5.4E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_03735 f890aadb781d77b299b6282f10718929 320 Pfam PF00892 EamA-like transporter family 16 149 1.3E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_03735 f890aadb781d77b299b6282f10718929 320 SUPERFAMILY SSF103481 54 152 1.44E-5 T 14-10-2018 AMBLS11_03735 f890aadb781d77b299b6282f10718929 320 SUPERFAMILY SSF103481 205 300 8.63E-12 T 14-10-2018 AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 SUPERFAMILY SSF46785 1 93 8.5E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 Gene3D G3DSA:3.40.190.10 72 271 3.4E-68 T 14-10-2018 AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 45 5.0E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 12 22 4.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 1 12 4.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 Gene3D G3DSA:3.40.190.10 145 250 3.4E-68 T 14-10-2018 AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 SUPERFAMILY SSF53850 71 271 9.77E-36 T 14-10-2018 AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 Gene3D G3DSA:1.10.10.10 1 71 1.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05125 267d8aef950ba34a022e6ccf49b95ee2 277 Pfam PF03466 LysR substrate binding domain 70 275 2.1E-34 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_08050 182232c2b36c128a58846b853071926f 901 Pfam PF00593 TonB dependent receptor 360 898 5.2E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_08050 182232c2b36c128a58846b853071926f 901 Gene3D G3DSA:2.170.130.10 38 181 1.6E-28 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_08050 182232c2b36c128a58846b853071926f 901 SUPERFAMILY SSF56935 45 901 3.43E-90 T 14-10-2018 AMBLS11_08050 182232c2b36c128a58846b853071926f 901 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 177 5.7E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_18900 c9af56989b50bcb7742fa041a18f8c68 112 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 7 85 3.9E-14 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMBLS11_18900 c9af56989b50bcb7742fa041a18f8c68 112 Gene3D G3DSA:1.10.10.10 4 107 6.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_18900 c9af56989b50bcb7742fa041a18f8c68 112 SUPERFAMILY SSF46767 6 86 3.4E-13 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMBLS11_11485 9cff20dfaff08e87644193b79bd38b56 263 Pfam PF01416 tRNA pseudouridine synthase 9 103 4.3E-8 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_11485 9cff20dfaff08e87644193b79bd38b56 263 Pfam PF01416 tRNA pseudouridine synthase 143 245 3.6E-28 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_11485 9cff20dfaff08e87644193b79bd38b56 263 PIRSF PIRSF001430 1 253 5.0E-76 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_11485 9cff20dfaff08e87644193b79bd38b56 263 Gene3D G3DSA:3.30.70.660 106 243 3.6E-47 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AMBLS11_11485 9cff20dfaff08e87644193b79bd38b56 263 Gene3D G3DSA:3.30.70.580 1 105 5.9E-38 T 14-10-2018 AMBLS11_11485 9cff20dfaff08e87644193b79bd38b56 263 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 1.9E-70 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_11485 9cff20dfaff08e87644193b79bd38b56 263 SUPERFAMILY SSF55120 2 256 5.9E-87 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_11485 9cff20dfaff08e87644193b79bd38b56 263 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 34.556 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 Gene3D G3DSA:1.10.1040.50 504 707 3.4E-72 T 14-10-2018 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 SUPERFAMILY SSF52096 10 308 6.13E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 210 8.7E-43 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 SUPERFAMILY SSF51735 316 498 9.66E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 11 712 0.0 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 624 708 8.2E-6 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 501 594 2.8E-24 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 SUPERFAMILY SSF48179 619 712 2.47E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 498 523 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 Gene3D G3DSA:3.40.50.720 310 503 2.0E-63 T 14-10-2018 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 319 498 1.6E-57 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 SUPERFAMILY SSF48179 501 600 1.28E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_05865 fe65518d0cb46eed0a3d23d9333e835b 713 Gene3D G3DSA:3.90.226.10 8 309 1.8E-97 T 14-10-2018 AMBLS11_16300 97da1d679b4ddb67aa6042869b76a4de 243 Gene3D G3DSA:2.160.10.10 42 238 6.7E-50 T 14-10-2018 AMBLS11_16300 97da1d679b4ddb67aa6042869b76a4de 243 SUPERFAMILY SSF51161 57 212 3.74E-34 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_16300 97da1d679b4ddb67aa6042869b76a4de 243 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 143 171 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMBLS11_16300 97da1d679b4ddb67aa6042869b76a4de 243 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 76 96 0.0021 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_16300 97da1d679b4ddb67aa6042869b76a4de 243 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 169 3.5E-9 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 SUPERFAMILY SSF51246 331 444 1.2E-43 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 9.3E-238 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.6E-85 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 SMART SM00878 336 441 4.4E-63 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 Gene3D G3DSA:3.30.1490.20 131 203 8.5E-156 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.7E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 Gene3D G3DSA:3.30.470.20 87 432 8.5E-156 T 14-10-2018 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 SUPERFAMILY SSF56059 83 345 1.03E-70 T 14-10-2018 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 SUPERFAMILY SSF52440 1 113 1.29E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 Gene3D G3DSA:3.40.50.20 1 85 1.8E-34 T 14-10-2018 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.4E-37 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMBLS11_18080 e601bc0c9c6e4620de268ade07aeac74 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMBLS11_07485 36e48c50ba3b8ad25b7891fab43d11dc 277 SUPERFAMILY SSF53335 68 241 1.18E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_07485 36e48c50ba3b8ad25b7891fab43d11dc 277 Pfam PF08241 Methyltransferase domain 91 183 3.2E-12 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMBLS11_07485 36e48c50ba3b8ad25b7891fab43d11dc 277 Gene3D G3DSA:3.40.50.150 59 261 6.7E-24 T 14-10-2018 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 Pfam PF01433 Peptidase family M1 domain 249 477 1.1E-67 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 Gene3D G3DSA:1.10.390.60 243 482 2.2E-76 T 14-10-2018 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 Pfam PF11838 ERAP1-like C-terminal domain 547 853 4.3E-27 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 174 189 1.8E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 298 308 1.8E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 333 348 1.8E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 221 236 1.8E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 352 364 1.8E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 SUPERFAMILY SSF55486 245 488 7.77E-69 T 14-10-2018 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 Gene3D G3DSA:2.60.40.1910 483 561 2.3E-8 T 14-10-2018 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 Gene3D G3DSA:1.25.50.20 566 880 2.0E-18 T 14-10-2018 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 Gene3D G3DSA:2.60.40.1730 39 239 2.2E-46 T 14-10-2018 AMBLS11_11220 174d465855ae989c08c7517035ccd86d 881 SUPERFAMILY SSF63737 46 238 2.75E-42 T 14-10-2018 AMBLS11_14670 1dd9a5a6c0cb64a84bc031e77241d86c 117 SUPERFAMILY SSF54909 1 116 1.34E-50 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMBLS11_14670 1dd9a5a6c0cb64a84bc031e77241d86c 117 PIRSF PIRSF007028 1 117 1.2E-46 T 14-10-2018 IPR009874 Protein of unknown function DUF1428 AMBLS11_14670 1dd9a5a6c0cb64a84bc031e77241d86c 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 7.4E-43 T 14-10-2018 IPR009874 Protein of unknown function DUF1428 AMBLS11_14670 1dd9a5a6c0cb64a84bc031e77241d86c 117 Gene3D G3DSA:3.30.70.100 1 116 3.8E-44 T 14-10-2018 AMBLS11_06310 c2c73700f4ffe162fcd1d365f82ef8c7 495 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 25 165 3.6E-32 T 14-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain AMBLS11_06310 c2c73700f4ffe162fcd1d365f82ef8c7 495 Pfam PF08443 RimK-like ATP-grasp domain 297 467 1.6E-10 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AMBLS11_06310 c2c73700f4ffe162fcd1d365f82ef8c7 495 Gene3D G3DSA:3.30.1490.20 306 372 1.3E-9 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_06310 c2c73700f4ffe162fcd1d365f82ef8c7 495 Gene3D G3DSA:3.40.50.20 218 304 3.2E-5 T 14-10-2018 AMBLS11_06310 c2c73700f4ffe162fcd1d365f82ef8c7 495 Gene3D G3DSA:3.30.470.20 373 489 5.4E-21 T 14-10-2018 AMBLS11_06310 c2c73700f4ffe162fcd1d365f82ef8c7 495 SUPERFAMILY SSF56059 281 489 5.58E-41 T 14-10-2018 AMBLS11_13625 d2ec2a0fe4ec52d9e3523013ffdd7d96 390 Pfam PF07690 Major Facilitator Superfamily 14 347 2.5E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_13625 d2ec2a0fe4ec52d9e3523013ffdd7d96 390 SUPERFAMILY SSF103473 13 384 2.22E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_13625 d2ec2a0fe4ec52d9e3523013ffdd7d96 390 Gene3D G3DSA:1.20.1250.20 11 199 1.5E-15 T 14-10-2018 AMBLS11_13625 d2ec2a0fe4ec52d9e3523013ffdd7d96 390 Gene3D G3DSA:1.20.1250.20 206 388 8.7E-13 T 14-10-2018 AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 Gene3D G3DSA:1.20.200.10 134 401 2.7E-92 T 14-10-2018 AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 Pfam PF00206 Lyase 12 337 1.8E-89 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 SUPERFAMILY SSF48557 2 451 3.61E-132 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 Pfam PF10415 Fumarase C C-terminus 403 455 9.1E-19 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 Gene3D G3DSA:1.10.40.30 403 457 7.2E-19 T 14-10-2018 AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 457 72.173 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 Gene3D G3DSA:1.10.275.10 5 133 4.6E-52 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 3.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 3.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 3.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 3.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.3E-6 T 14-10-2018 AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.3E-6 T 14-10-2018 AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.3E-6 T 14-10-2018 AMBLS11_14770 7399ea9c458b0a1d215661e9f66b5075 457 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMBLS11_00165 054da9cd77a64deb60967e4f70eb245b 303 Gene3D G3DSA:3.40.50.12580 98 269 3.6E-7 T 14-10-2018 AMBLS11_00165 054da9cd77a64deb60967e4f70eb245b 303 SUPERFAMILY SSF53756 12 274 7.85E-31 T 14-10-2018 AMBLS11_00165 054da9cd77a64deb60967e4f70eb245b 303 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 133 271 7.2E-10 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMBLS11_02185 426319fad9a7b3fda58ae43c60ec52e4 302 SUPERFAMILY SSF88713 27 237 1.04E-65 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMBLS11_02185 426319fad9a7b3fda58ae43c60ec52e4 302 Gene3D G3DSA:3.20.20.370 18 253 5.2E-75 T 14-10-2018 AMBLS11_02185 426319fad9a7b3fda58ae43c60ec52e4 302 Pfam PF04748 Divergent polysaccharide deacetylase 30 238 5.0E-72 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase AMBLS11_07150 685804242d9bdec875ab620ba32e1327 108 ProSitePatterns PS00769 Transthyretin signature 2. 91 103 - T 14-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMBLS11_07150 685804242d9bdec875ab620ba32e1327 108 Gene3D G3DSA:2.60.40.180 1 108 2.7E-33 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMBLS11_07150 685804242d9bdec875ab620ba32e1327 108 PRINTS PR00189 Transthyretin signature 3 23 9.0E-5 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMBLS11_07150 685804242d9bdec875ab620ba32e1327 108 PRINTS PR00189 Transthyretin signature 86 108 9.0E-5 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMBLS11_07150 685804242d9bdec875ab620ba32e1327 108 SUPERFAMILY SSF49472 1 108 4.19E-35 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMBLS11_07150 685804242d9bdec875ab620ba32e1327 108 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 108 3.9E-32 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AMBLS11_07150 685804242d9bdec875ab620ba32e1327 108 Pfam PF00576 HIUase/Transthyretin family 4 107 1.5E-30 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMBLS11_03355 7c4b067b82c28610c04b9d80411f930d 275 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 265 8.1E-90 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMBLS11_03355 7c4b067b82c28610c04b9d80411f930d 275 Gene3D G3DSA:1.10.8.100 203 269 3.7E-23 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AMBLS11_03355 7c4b067b82c28610c04b9d80411f930d 275 SMART SM00650 24 200 4.9E-85 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AMBLS11_03355 7c4b067b82c28610c04b9d80411f930d 275 SUPERFAMILY SSF53335 7 266 8.44E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_03355 7c4b067b82c28610c04b9d80411f930d 275 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 265 1.3E-77 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMBLS11_03355 7c4b067b82c28610c04b9d80411f930d 275 Gene3D G3DSA:3.40.50.150 2 201 1.9E-64 T 14-10-2018 AMBLS11_03355 7c4b067b82c28610c04b9d80411f930d 275 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 40 67 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AMBLS11_03355 7c4b067b82c28610c04b9d80411f930d 275 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 8 267 56.447 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMBLS11_07645 151ce655da82ea73a7f61eed9cd87b81 535 Pfam PF01039 Carboxyl transferase domain 48 526 6.4E-153 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMBLS11_07645 151ce655da82ea73a7f61eed9cd87b81 535 SUPERFAMILY SSF52096 23 270 1.29E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_07645 151ce655da82ea73a7f61eed9cd87b81 535 Gene3D G3DSA:3.90.226.10 1 271 3.8E-95 T 14-10-2018 AMBLS11_07645 151ce655da82ea73a7f61eed9cd87b81 535 SUPERFAMILY SSF52096 237 517 5.63E-90 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_07645 151ce655da82ea73a7f61eed9cd87b81 535 Gene3D G3DSA:3.90.226.10 274 535 1.5E-104 T 14-10-2018 AMBLS11_05195 517c19e11ac1ef7ba2e17fd4f1f2c849 376 PIRSF PIRSF015658 1 376 1.0E-175 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AMBLS11_05195 517c19e11ac1ef7ba2e17fd4f1f2c849 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 6.5E-169 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AMBLS11_05195 517c19e11ac1ef7ba2e17fd4f1f2c849 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 2.8E-158 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AMBLS11_09320 1762748e65cad3ca66b7b4b03c56b113 151 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site AMBLS11_09320 1762748e65cad3ca66b7b4b03c56b113 151 SUPERFAMILY SSF55781 2 146 5.23E-43 T 14-10-2018 AMBLS11_09320 1762748e65cad3ca66b7b4b03c56b113 151 Gene3D G3DSA:3.30.450.40 1 151 1.0E-65 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_09320 1762748e65cad3ca66b7b4b03c56b113 151 Pfam PF13185 GAF domain 32 145 1.3E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMBLS11_15050 fedf6736067436965b3be9c185661f7d 312 Gene3D G3DSA:1.10.10.10 6 92 3.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15050 fedf6736067436965b3be9c185661f7d 312 SUPERFAMILY SSF46785 10 90 6.67E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_15050 fedf6736067436965b3be9c185661f7d 312 Gene3D G3DSA:3.40.190.10 166 269 2.0E-56 T 14-10-2018 AMBLS11_15050 fedf6736067436965b3be9c185661f7d 312 Gene3D G3DSA:3.40.190.10 94 296 2.0E-56 T 14-10-2018 AMBLS11_15050 fedf6736067436965b3be9c185661f7d 312 Pfam PF03466 LysR substrate binding domain 91 298 2.3E-35 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_15050 fedf6736067436965b3be9c185661f7d 312 SUPERFAMILY SSF53850 91 299 3.44E-34 T 14-10-2018 AMBLS11_15050 fedf6736067436965b3be9c185661f7d 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 6.6E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_13400 05d95f94448c07f5c999431ff185abe2 126 SUPERFAMILY SSF54593 2 125 1.65E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_13400 05d95f94448c07f5c999431ff185abe2 126 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 112 4.2E-7 T 14-10-2018 AMBLS11_13400 05d95f94448c07f5c999431ff185abe2 126 Gene3D G3DSA:3.10.180.10 5 125 7.1E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_02310 ed89570f8fa19847f2681da1bee3a29a 503 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 10 503 52.804 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AMBLS11_02310 ed89570f8fa19847f2681da1bee3a29a 503 SUPERFAMILY SSF53067 140 310 2.33E-42 T 14-10-2018 AMBLS11_02310 ed89570f8fa19847f2681da1bee3a29a 503 SUPERFAMILY SSF53067 15 134 3.49E-35 T 14-10-2018 AMBLS11_02310 ed89570f8fa19847f2681da1bee3a29a 503 Pfam PF02541 Ppx/GppA phosphatase family 29 310 2.2E-78 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AMBLS11_02310 ed89570f8fa19847f2681da1bee3a29a 503 Gene3D G3DSA:1.10.3210.10 312 503 1.1E-49 T 14-10-2018 AMBLS11_02310 ed89570f8fa19847f2681da1bee3a29a 503 PIRSF PIRSF001267 6 503 5.6E-170 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AMBLS11_02310 ed89570f8fa19847f2681da1bee3a29a 503 Gene3D G3DSA:3.30.420.150 120 297 5.3E-79 T 14-10-2018 AMBLS11_02310 ed89570f8fa19847f2681da1bee3a29a 503 SUPERFAMILY SSF109604 315 500 1.88E-42 T 14-10-2018 AMBLS11_02310 ed89570f8fa19847f2681da1bee3a29a 503 Gene3D G3DSA:3.30.420.40 17 305 5.3E-79 T 14-10-2018 AMBLS11_13810 3fe77fc91051edac4a906ee4ca86c008 310 Gene3D G3DSA:3.10.310.30 258 307 2.1E-5 T 14-10-2018 AMBLS11_13810 3fe77fc91051edac4a906ee4ca86c008 310 PIRSF PIRSF028235 1 310 2.8E-160 T 14-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 AMBLS11_13810 3fe77fc91051edac4a906ee4ca86c008 310 SUPERFAMILY SSF64182 4 306 1.83E-8 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily AMBLS11_15195 6ebbf5920f61503589bd84f00e82108d 584 SUPERFAMILY SSF55073 424 579 1.88E-46 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_15195 6ebbf5920f61503589bd84f00e82108d 584 Pfam PF00990 Diguanylate cyclase, GGDEF domain 419 573 1.0E-44 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15195 6ebbf5920f61503589bd84f00e82108d 584 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 416 576 1.7E-51 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15195 6ebbf5920f61503589bd84f00e82108d 584 Pfam PF07696 7TMR-DISM extracellular 2 40 186 5.5E-14 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AMBLS11_15195 6ebbf5920f61503589bd84f00e82108d 584 Pfam PF07695 7TM diverse intracellular signalling 200 402 1.2E-34 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AMBLS11_15195 6ebbf5920f61503589bd84f00e82108d 584 Gene3D G3DSA:3.30.70.270 404 579 1.1E-53 T 14-10-2018 AMBLS11_15195 6ebbf5920f61503589bd84f00e82108d 584 SMART SM00267 408 577 6.0E-54 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06545 25eb504d90b9c039ce2dbf032c82e497 258 Gene3D G3DSA:1.10.150.650 71 142 4.3E-66 T 14-10-2018 AMBLS11_06545 25eb504d90b9c039ce2dbf032c82e497 258 Gene3D G3DSA:3.20.20.140 2 223 4.3E-66 T 14-10-2018 AMBLS11_06545 25eb504d90b9c039ce2dbf032c82e497 258 SUPERFAMILY SSF89550 3 250 1.29E-34 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMBLS11_01180 eed9ba37912c6116053012c14226009c 97 Gene3D G3DSA:1.20.5.780 15 97 7.7E-20 T 14-10-2018 AMBLS11_01180 eed9ba37912c6116053012c14226009c 97 Pfam PF08681 Protein of unknown function (DUF1778) 20 96 2.2E-20 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 AMBLS11_01180 eed9ba37912c6116053012c14226009c 97 SUPERFAMILY SSF47598 17 95 1.33E-17 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMBLS11_01485 eed9ba37912c6116053012c14226009c 97 Gene3D G3DSA:1.20.5.780 15 97 7.7E-20 T 14-10-2018 AMBLS11_01485 eed9ba37912c6116053012c14226009c 97 Pfam PF08681 Protein of unknown function (DUF1778) 20 96 2.2E-20 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 AMBLS11_01485 eed9ba37912c6116053012c14226009c 97 SUPERFAMILY SSF47598 17 95 1.33E-17 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMBLS11_18245 3048604a59345c6ea26eaf3d763f7b64 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 8 139 2.1E-49 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AMBLS11_18245 3048604a59345c6ea26eaf3d763f7b64 145 Gene3D G3DSA:3.30.700.10 23 138 7.8E-35 T 14-10-2018 AMBLS11_18245 3048604a59345c6ea26eaf3d763f7b64 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 2.4E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18245 3048604a59345c6ea26eaf3d763f7b64 145 Pfam PF08334 Type II secretion system (T2SS), protein G 32 138 1.8E-35 T 14-10-2018 IPR013545 Type II secretion system protein G AMBLS11_18245 3048604a59345c6ea26eaf3d763f7b64 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 5.7E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18245 3048604a59345c6ea26eaf3d763f7b64 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 1.9E-17 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMBLS11_18245 3048604a59345c6ea26eaf3d763f7b64 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 1.9E-17 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMBLS11_18245 3048604a59345c6ea26eaf3d763f7b64 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_18245 3048604a59345c6ea26eaf3d763f7b64 145 SUPERFAMILY SSF54523 35 140 5.76E-37 T 14-10-2018 AMBLS11_16910 67f3dcc07744bb8adbe3c58e2c0b96ff 277 Pfam PF10670 Domain of unknown function (DUF4198) 23 254 3.4E-62 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 AMBLS11_02340 2c2ab9193fba66e965a7636f0ed00b88 424 Pfam PF06965 Na+/H+ antiporter 1 23 398 2.7E-149 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMBLS11_02340 2c2ab9193fba66e965a7636f0ed00b88 424 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 21 406 22.741 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMBLS11_02340 2c2ab9193fba66e965a7636f0ed00b88 424 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 24 398 3.2E-139 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMBLS11_02340 2c2ab9193fba66e965a7636f0ed00b88 424 Gene3D G3DSA:1.20.1530.10 19 405 4.3E-149 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily AMBLS11_13885 18eee1860fadb35cd4f3766902425ed3 267 Pfam PF04338 Protein of unknown function, DUF481 53 266 4.5E-48 T 14-10-2018 IPR007433 Protein of unknown function DUF481 AMBLS11_07885 86847fdbf0df57ff0ad0d3ea49d43e13 321 Gene3D G3DSA:3.40.47.10 2 321 8.4E-120 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07885 86847fdbf0df57ff0ad0d3ea49d43e13 321 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 321 66.04 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMBLS11_07885 86847fdbf0df57ff0ad0d3ea49d43e13 321 SUPERFAMILY SSF53901 4 321 2.96E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07885 86847fdbf0df57ff0ad0d3ea49d43e13 321 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 185 3.6E-28 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMBLS11_07885 86847fdbf0df57ff0ad0d3ea49d43e13 321 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 321 3.1E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMBLS11_07885 86847fdbf0df57ff0ad0d3ea49d43e13 321 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 321 8.2E-134 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMBLS11_06215 928296ba4c2b274a45309be5d4885f98 147 SUPERFAMILY SSF53850 28 143 1.29E-8 T 14-10-2018 AMBLS11_06215 928296ba4c2b274a45309be5d4885f98 147 Gene3D G3DSA:3.40.190.10 29 145 1.2E-6 T 14-10-2018 AMBLS11_03910 05c2148ea34fed5872d722ac7574b89e 224 Pfam PF03006 Haemolysin-III related 23 216 2.3E-35 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AMBLS11_03910 05c2148ea34fed5872d722ac7574b89e 224 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 26 222 5.2E-62 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AMBLS11_06015 7b7f61c5a89004dc84ef3a611dea7cfc 260 Gene3D G3DSA:3.40.1010.10 1 123 3.6E-13 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMBLS11_06015 7b7f61c5a89004dc84ef3a611dea7cfc 260 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 213 1.5E-15 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMBLS11_06015 7b7f61c5a89004dc84ef3a611dea7cfc 260 SUPERFAMILY SSF53790 4 245 1.03E-21 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMBLS11_16360 2c3a0a36079b61d18da71be49df351f4 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-9 T 14-10-2018 AMBLS11_16360 2c3a0a36079b61d18da71be49df351f4 38 SUPERFAMILY SSF57840 1 38 3.4E-17 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16360 2c3a0a36079b61d18da71be49df351f4 38 Pfam PF00444 Ribosomal protein L36 1 38 2.5E-20 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16360 2c3a0a36079b61d18da71be49df351f4 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16360 2c3a0a36079b61d18da71be49df351f4 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.304 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16360 2c3a0a36079b61d18da71be49df351f4 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 2.3E-22 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02105 8e743f98ddb5c32da542d430ef59b49b 281 Pfam PF00696 Amino acid kinase family 6 235 2.1E-39 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMBLS11_02105 8e743f98ddb5c32da542d430ef59b49b 281 SUPERFAMILY SSF53633 5 254 1.13E-54 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_02105 8e743f98ddb5c32da542d430ef59b49b 281 Gene3D G3DSA:3.40.1160.10 2 253 1.1E-61 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_02105 8e743f98ddb5c32da542d430ef59b49b 281 TIGRFAM TIGR00761 argB: acetylglutamate kinase 6 233 3.4E-57 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMBLS11_02105 8e743f98ddb5c32da542d430ef59b49b 281 PIRSF PIRSF000728 1 255 2.7E-63 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMBLS11_02105 8e743f98ddb5c32da542d430ef59b49b 281 Hamap MF_00082 Acetylglutamate kinase [argB]. 3 251 40.285 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMBLS11_07825 b1e56b4996288306206a397911fcd069 200 Pfam PF12804 MobA-like NTP transferase domain 10 158 1.0E-27 T 14-10-2018 IPR025877 MobA-like NTP transferase AMBLS11_07825 b1e56b4996288306206a397911fcd069 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 199 19.221 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AMBLS11_07825 b1e56b4996288306206a397911fcd069 200 SUPERFAMILY SSF53448 9 196 1.33E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07825 b1e56b4996288306206a397911fcd069 200 Gene3D G3DSA:3.90.550.10 1 199 7.0E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_18695 1aa67661df94285f6a1af6804fb542f4 415 Gene3D G3DSA:1.20.1720.10 25 405 6.2E-76 T 14-10-2018 AMBLS11_18695 1aa67661df94285f6a1af6804fb542f4 415 Pfam PF07690 Major Facilitator Superfamily 32 370 5.7E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_18695 1aa67661df94285f6a1af6804fb542f4 415 SUPERFAMILY SSF103473 25 403 5.1E-43 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_10525 aa114b76aee0b6492d31eb52cff8b236 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 313 1.2E-25 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_10525 aa114b76aee0b6492d31eb52cff8b236 397 Gene3D G3DSA:2.40.420.20 325 392 7.1E-70 T 14-10-2018 AMBLS11_10525 aa114b76aee0b6492d31eb52cff8b236 397 Gene3D G3DSA:2.40.50.100 111 241 7.1E-70 T 14-10-2018 AMBLS11_10525 aa114b76aee0b6492d31eb52cff8b236 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 87 394 3.5E-68 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_10525 aa114b76aee0b6492d31eb52cff8b236 397 Gene3D G3DSA:1.10.287.470 146 205 7.1E-70 T 14-10-2018 AMBLS11_10525 aa114b76aee0b6492d31eb52cff8b236 397 Gene3D G3DSA:2.40.30.170 98 324 7.1E-70 T 14-10-2018 AMBLS11_10525 aa114b76aee0b6492d31eb52cff8b236 397 SUPERFAMILY SSF111369 100 320 2.75E-37 T 14-10-2018 AMBLS11_16100 57466f4582ceebebe41f254e8d715f60 350 Pfam PF00248 Aldo/keto reductase family 16 340 5.3E-61 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMBLS11_16100 57466f4582ceebebe41f254e8d715f60 350 SUPERFAMILY SSF51430 1 347 5.24E-90 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_16100 57466f4582ceebebe41f254e8d715f60 350 Gene3D G3DSA:3.20.20.100 1 348 2.8E-106 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_14040 7f6758660199d13a6698add3d0cf7236 380 Gene3D G3DSA:3.40.50.2000 191 360 1.4E-43 T 14-10-2018 AMBLS11_14040 7f6758660199d13a6698add3d0cf7236 380 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 376 34.925 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_14040 7f6758660199d13a6698add3d0cf7236 380 Gene3D G3DSA:3.40.50.2000 1 188 3.2E-64 T 14-10-2018 AMBLS11_14040 7f6758660199d13a6698add3d0cf7236 380 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 206 351 5.7E-37 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMBLS11_14040 7f6758660199d13a6698add3d0cf7236 380 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 370 5.8E-99 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_14040 7f6758660199d13a6698add3d0cf7236 380 SUPERFAMILY SSF53756 3 376 1.06E-110 T 14-10-2018 AMBLS11_14040 7f6758660199d13a6698add3d0cf7236 380 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 1.2E-44 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 Pfam PF14559 Tetratricopeptide repeat 348 394 3.2E-6 T 14-10-2018 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 Gene3D G3DSA:1.25.40.10 59 331 1.7E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 Gene3D G3DSA:1.25.40.10 338 456 1.6E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 SMART SM00028 158 191 0.26 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 SMART SM00028 124 157 55.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 SMART SM00028 406 439 240.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 SMART SM00028 372 405 19.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 SMART SM00028 338 371 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 SMART SM00028 226 259 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 SUPERFAMILY SSF48452 95 256 2.66E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 Pfam PF13429 Tetratricopeptide repeat 156 249 2.1E-8 T 14-10-2018 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 SUPERFAMILY SSF48452 338 451 5.06E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_16940 ba4f31f3c3b2f87c88c752dc72517313 457 Pfam PF13432 Tetratricopeptide repeat 410 441 0.0018 T 14-10-2018 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.6E-45 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 Gene3D G3DSA:3.90.1170.10 1 136 7.2E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.69 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 SUPERFAMILY SSF54686 3 133 6.15E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 1.6E-56 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.7E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.7E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.7E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_01755 b1db89655b78654be10ee67c3a30b728 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.7E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 SUPERFAMILY SSF52518 316 504 4.19E-56 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 4.2E-286 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 Pfam PF02780 Transketolase, C-terminal domain 508 616 4.2E-23 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 6.1E-121 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 SUPERFAMILY SSF52518 7 381 1.58E-79 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 SUPERFAMILY SSF52922 491 623 2.62E-28 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 Gene3D G3DSA:3.40.50.970 317 490 1.7E-65 T 14-10-2018 AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 9.3E-38 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 625 45.247 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 Gene3D G3DSA:3.40.50.920 495 625 2.0E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_12160 34eba164cdff9657771efede4c8a4d27 626 SMART SM00861 319 483 1.1E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMBLS11_10650 caf4218035bd53a6860bfa995525fc28 447 Gene3D G3DSA:3.80.30.20 1 353 1.3E-111 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMBLS11_10650 caf4218035bd53a6860bfa995525fc28 447 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 3 447 5.6E-156 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AMBLS11_10650 caf4218035bd53a6860bfa995525fc28 447 Gene3D G3DSA:1.10.10.920 354 447 1.0E-26 T 14-10-2018 AMBLS11_10650 caf4218035bd53a6860bfa995525fc28 447 SMART SM00729 42 262 2.6E-43 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMBLS11_10650 caf4218035bd53a6860bfa995525fc28 447 PIRSF PIRSF000167 1 444 1.7E-151 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AMBLS11_10650 caf4218035bd53a6860bfa995525fc28 447 Pfam PF04055 Radical SAM superfamily 47 216 8.0E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_10650 caf4218035bd53a6860bfa995525fc28 447 SUPERFAMILY SSF102114 3 434 8.04E-115 T 14-10-2018 AMBLS11_10855 7fea0904cb51d3717c998c8c764df96a 249 Pfam PF05239 PRC-barrel domain 149 214 3.9E-5 T 14-10-2018 IPR027275 PRC-barrel domain AMBLS11_10855 7fea0904cb51d3717c998c8c764df96a 249 SUPERFAMILY SSF50346 2 114 1.41E-22 T 14-10-2018 IPR011033 PRC-barrel-like superfamily AMBLS11_10855 7fea0904cb51d3717c998c8c764df96a 249 SUPERFAMILY SSF50346 138 234 1.14E-16 T 14-10-2018 IPR011033 PRC-barrel-like superfamily AMBLS11_10855 7fea0904cb51d3717c998c8c764df96a 249 Gene3D G3DSA:3.90.50.10 5 113 5.0E-15 T 14-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 AMBLS11_10855 7fea0904cb51d3717c998c8c764df96a 249 Gene3D G3DSA:2.30.30.240 132 224 6.0E-11 T 14-10-2018 AMBLS11_07985 f579b3b175dce23687a3111d35801d5e 393 PIRSF PIRSF000429 1 393 1.5E-116 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMBLS11_07985 f579b3b175dce23687a3111d35801d5e 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMBLS11_07985 f579b3b175dce23687a3111d35801d5e 393 SUPERFAMILY SSF53901 1 266 1.69E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07985 f579b3b175dce23687a3111d35801d5e 393 Gene3D G3DSA:3.40.47.10 141 387 8.6E-136 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07985 f579b3b175dce23687a3111d35801d5e 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 2.6E-126 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMBLS11_07985 f579b3b175dce23687a3111d35801d5e 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 3.9E-43 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMBLS11_07985 f579b3b175dce23687a3111d35801d5e 393 Gene3D G3DSA:3.40.47.10 4 280 8.6E-136 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_07985 f579b3b175dce23687a3111d35801d5e 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 3.0E-64 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMBLS11_07985 f579b3b175dce23687a3111d35801d5e 393 SUPERFAMILY SSF53901 272 392 1.01E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMBLS11_16650 e1000949f5e42130d024248b9f2c7471 103 ProSitePatterns PS00622 LuxR-type HTH domain signature. 52 79 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16650 e1000949f5e42130d024248b9f2c7471 103 SUPERFAMILY SSF46894 31 94 4.76E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_16650 e1000949f5e42130d024248b9f2c7471 103 SMART SM00421 35 92 1.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16650 e1000949f5e42130d024248b9f2c7471 103 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 38 52 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16650 e1000949f5e42130d024248b9f2c7471 103 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 68 80 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16650 e1000949f5e42130d024248b9f2c7471 103 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 52 68 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_16650 e1000949f5e42130d024248b9f2c7471 103 Gene3D G3DSA:1.10.10.10 30 101 1.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_16650 e1000949f5e42130d024248b9f2c7471 103 Pfam PF00196 Bacterial regulatory proteins, luxR family 37 90 4.3E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14090 ed2a4ef6d83f323840ddeb9b8061a2c6 274 SUPERFAMILY SSF56935 180 274 3.26E-7 T 14-10-2018 AMBLS11_03945 73aed702ce388ad8e6488503c8f085d3 343 Pfam PF06580 Histidine kinase 153 230 1.1E-22 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMBLS11_03945 73aed702ce388ad8e6488503c8f085d3 343 Gene3D G3DSA:3.30.565.10 207 343 2.4E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03945 73aed702ce388ad8e6488503c8f085d3 343 SUPERFAMILY SSF55874 215 320 2.04E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03945 73aed702ce388ad8e6488503c8f085d3 343 Pfam PF14501 GHKL domain 251 342 1.4E-7 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain AMBLS11_09585 d5a0281e04ec911297d3eba2268e5615 208 PIRSF PIRSF006324 1 208 1.5E-44 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMBLS11_09585 d5a0281e04ec911297d3eba2268e5615 208 Pfam PF01810 LysE type translocator 16 207 3.5E-28 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMBLS11_11315 3ba9d62cc446535602cea01fab64a25a 197 Gene3D G3DSA:2.70.40.10 1 162 3.7E-52 T 14-10-2018 IPR036157 dUTPase-like superfamily AMBLS11_11315 3ba9d62cc446535602cea01fab64a25a 197 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.4E-67 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AMBLS11_11315 3ba9d62cc446535602cea01fab64a25a 197 SUPERFAMILY SSF51283 1 191 2.97E-59 T 14-10-2018 IPR036157 dUTPase-like superfamily AMBLS11_11315 3ba9d62cc446535602cea01fab64a25a 197 Pfam PF00692 dUTPase 75 185 1.7E-9 T 14-10-2018 IPR029054 dUTPase-like AMBLS11_11315 3ba9d62cc446535602cea01fab64a25a 197 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 34.223 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SMART SM00028 112 145 50.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SMART SM00028 72 105 96.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SMART SM00028 152 185 1.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SMART SM00028 272 305 52.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SMART SM00028 232 265 280.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SUPERFAMILY SSF55073 495 665 1.49E-35 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 486 664 5.9E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 Gene3D G3DSA:3.30.70.270 475 666 3.7E-48 T 14-10-2018 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 Pfam PF13424 Tetratricopeptide repeat 111 183 2.9E-9 T 14-10-2018 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 Pfam PF00990 Diguanylate cyclase, GGDEF domain 491 662 8.2E-37 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SUPERFAMILY SSF48452 54 155 1.43E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SUPERFAMILY SSF48452 237 339 1.22E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 Gene3D G3DSA:1.25.40.10 45 239 1.5E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SUPERFAMILY SSF48452 127 267 2.02E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 Gene3D G3DSA:1.25.40.10 240 383 5.6E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_14145 171a4f6bc69a9f38525088f422655a06 710 SMART SM00267 479 667 6.9E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_14320 600916d2cf5a1ab4a875d15ef3c97fb5 223 Gene3D G3DSA:3.40.470.10 3 223 4.6E-105 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_14320 600916d2cf5a1ab4a875d15ef3c97fb5 223 Pfam PF03167 Uracil DNA glycosylase superfamily 54 210 5.6E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_14320 600916d2cf5a1ab4a875d15ef3c97fb5 223 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 5 222 40.828 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_14320 600916d2cf5a1ab4a875d15ef3c97fb5 223 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 215 3.0E-88 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_14320 600916d2cf5a1ab4a875d15ef3c97fb5 223 SUPERFAMILY SSF52141 7 222 6.54E-96 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_14320 600916d2cf5a1ab4a875d15ef3c97fb5 223 SMART SM00986 50 211 2.7E-42 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_14320 600916d2cf5a1ab4a875d15ef3c97fb5 223 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_14320 600916d2cf5a1ab4a875d15ef3c97fb5 223 SMART SM00987 50 211 2.7E-42 T 14-10-2018 AMBLS11_15255 339c36980f13ee7b1c1522fcb6c8feda 129 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 46 126 1.2E-30 T 14-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AMBLS11_15255 339c36980f13ee7b1c1522fcb6c8feda 129 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 61 125 1.1E-15 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D AMBLS11_15255 339c36980f13ee7b1c1522fcb6c8feda 129 Gene3D G3DSA:1.10.10.1150 38 127 8.0E-22 T 14-10-2018 AMBLS11_18845 931070d8d54c11f0c41a7ca0d28d12af 500 Gene3D G3DSA:2.40.160.10 74 500 6.3E-24 T 14-10-2018 IPR023614 Porin domain superfamily AMBLS11_18845 931070d8d54c11f0c41a7ca0d28d12af 500 Pfam PF03573 outer membrane porin, OprD family 168 376 3.6E-10 T 14-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 323 44.777 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 Gene3D G3DSA:3.30.540.10 3 185 4.3E-60 T 14-10-2018 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 PIRSF PIRSF000904 2 325 1.1E-114 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 Gene3D G3DSA:3.40.190.80 186 323 5.5E-52 T 14-10-2018 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 263 275 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 169 192 2.9E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 195 222 2.9E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 297 322 2.9E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 2.9E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 138 161 2.9E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 2.9E-61 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 184 7.1E-53 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 PIRSF PIRSF500210 2 325 5.6E-118 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AMBLS11_00835 9b3bf4e378e6a1a43d0c83593d2c61d4 325 SUPERFAMILY SSF56655 3 320 1.16E-109 T 14-10-2018 AMBLS11_06945 44491113bb1ebd32cbf1cd58f0996e41 365 Gene3D G3DSA:3.30.70.2810 3 81 2.7E-22 T 14-10-2018 AMBLS11_06945 44491113bb1ebd32cbf1cd58f0996e41 365 Gene3D G3DSA:3.30.2300.20 82 180 2.4E-32 T 14-10-2018 AMBLS11_06945 44491113bb1ebd32cbf1cd58f0996e41 365 Gene3D G3DSA:3.40.50.150 181 361 3.1E-49 T 14-10-2018 AMBLS11_06945 44491113bb1ebd32cbf1cd58f0996e41 365 PIRSF PIRSF028774 3 365 6.2E-131 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AMBLS11_06945 44491113bb1ebd32cbf1cd58f0996e41 365 Pfam PF01728 FtsJ-like methyltransferase 191 250 3.2E-5 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMBLS11_06945 44491113bb1ebd32cbf1cd58f0996e41 365 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 3 360 75.79 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AMBLS11_06945 44491113bb1ebd32cbf1cd58f0996e41 365 SUPERFAMILY SSF53335 189 287 2.36E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 Pfam PF08482 ATP-dependent helicase C-terminal 748 879 1.7E-45 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 SUPERFAMILY SSF52540 27 350 6.67E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 Pfam PF04408 Helicase associated domain (HA2) 399 493 4.1E-7 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 Pfam PF00270 DEAD/DEAH box helicase 25 167 1.9E-6 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 SMART SM00487 3 196 5.4E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 PIRSF PIRSF005496 7 892 6.1E-230 T 14-10-2018 AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 Gene3D G3DSA:3.40.50.300 3 184 4.5E-46 T 14-10-2018 AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 Gene3D G3DSA:3.40.50.300 190 358 1.3E-51 T 14-10-2018 AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 SMART SM00490 240 339 2.0E-13 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_01825 e6b268ffb9799b40510396b3dd3b8fa7 892 Pfam PF00271 Helicase conserved C-terminal domain 218 338 6.1E-13 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_07160 45d5544ed9ef759db77f7492290e631f 314 SUPERFAMILY SSF51735 101 200 8.75E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_07160 45d5544ed9ef759db77f7492290e631f 314 Gene3D G3DSA:3.40.50.720 115 262 2.0E-36 T 14-10-2018 AMBLS11_07160 45d5544ed9ef759db77f7492290e631f 314 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 29 259 1.1E-82 T 14-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC AMBLS11_07160 45d5544ed9ef759db77f7492290e631f 314 Pfam PF02625 XdhC and CoxI family 23 85 5.3E-19 T 14-10-2018 IPR003777 XdhC- CoxI AMBLS11_07160 45d5544ed9ef759db77f7492290e631f 314 Pfam PF13478 XdhC Rossmann domain 117 258 1.5E-33 T 14-10-2018 IPR027051 XdhC Rossmann domain AMBLS11_12785 5341da7fed3fb38f07bea333e263024e 273 SUPERFAMILY SSF52768 13 259 6.71E-76 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily AMBLS11_12785 5341da7fed3fb38f07bea333e263024e 273 Pfam PF00850 Histone deacetylase domain 13 256 8.5E-49 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_12785 5341da7fed3fb38f07bea333e263024e 273 PRINTS PR01270 Histone deacetylase superfamily signature 90 113 1.1E-14 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_12785 5341da7fed3fb38f07bea333e263024e 273 PRINTS PR01270 Histone deacetylase superfamily signature 124 139 1.1E-14 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_12785 5341da7fed3fb38f07bea333e263024e 273 PRINTS PR01270 Histone deacetylase superfamily signature 198 208 1.1E-14 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_12785 5341da7fed3fb38f07bea333e263024e 273 Gene3D G3DSA:3.40.800.20 5 267 2.1E-60 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMBLS11_11235 75849a6320d007ab48f122d4b765dbc1 134 Gene3D G3DSA:3.40.190.10 17 133 1.9E-10 T 14-10-2018 AMBLS11_11235 75849a6320d007ab48f122d4b765dbc1 134 SUPERFAMILY SSF53850 16 131 7.06E-16 T 14-10-2018 AMBLS11_17715 51d3751a9025c92287cabdcf94ee6523 188 Pfam PF04264 YceI-like domain 22 184 5.1E-41 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMBLS11_17715 51d3751a9025c92287cabdcf94ee6523 188 SUPERFAMILY SSF101874 19 188 8.76E-56 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMBLS11_17715 51d3751a9025c92287cabdcf94ee6523 188 SMART SM00867 21 186 1.7E-70 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMBLS11_17715 51d3751a9025c92287cabdcf94ee6523 188 Gene3D G3DSA:2.40.128.110 20 188 1.7E-54 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMBLS11_18420 2c9a8cb52d77827c87b44e56c5858d56 1012 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 40 1012 5.1E-181 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_18420 2c9a8cb52d77827c87b44e56c5858d56 1012 Gene3D G3DSA:2.170.130.10 28 180 8.9E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_18420 2c9a8cb52d77827c87b44e56c5858d56 1012 SUPERFAMILY SSF56935 28 1012 1.21E-83 T 14-10-2018 AMBLS11_18420 2c9a8cb52d77827c87b44e56c5858d56 1012 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 170 3.3E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_18420 2c9a8cb52d77827c87b44e56c5858d56 1012 Pfam PF00593 TonB dependent receptor 451 1011 2.6E-24 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_15495 2c367e70810701f8fac25fd5304bffb2 352 Gene3D G3DSA:3.60.15.10 23 285 6.2E-59 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_15495 2c367e70810701f8fac25fd5304bffb2 352 Gene3D G3DSA:1.10.10.10 287 336 6.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15495 2c367e70810701f8fac25fd5304bffb2 352 Pfam PF00753 Metallo-beta-lactamase superfamily 42 258 1.7E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_15495 2c367e70810701f8fac25fd5304bffb2 352 SMART SM00849 43 258 3.2E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_15495 2c367e70810701f8fac25fd5304bffb2 352 SUPERFAMILY SSF56281 14 342 5.63E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_01365 d48da2ffa636516823185e669415d954 217 Gene3D G3DSA:1.20.120.1630 7 208 3.0E-24 T 14-10-2018 AMBLS11_01365 d48da2ffa636516823185e669415d954 217 Pfam PF04191 Phospholipid methyltransferase 121 192 2.7E-7 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AMBLS11_07145 0e9e82f991aa93d9f3c19c057322b2fe 430 SUPERFAMILY SSF51556 65 368 7.21E-91 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_07145 0e9e82f991aa93d9f3c19c057322b2fe 430 SUPERFAMILY SSF51338 21 80 2.59E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_07145 0e9e82f991aa93d9f3c19c057322b2fe 430 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 23 421 8.5E-163 T 14-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 AMBLS11_07145 0e9e82f991aa93d9f3c19c057322b2fe 430 Gene3D G3DSA:2.30.40.10 5 419 2.4E-164 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_07145 0e9e82f991aa93d9f3c19c057322b2fe 430 Gene3D G3DSA:3.20.20.140 66 383 2.4E-164 T 14-10-2018 AMBLS11_07145 0e9e82f991aa93d9f3c19c057322b2fe 430 Pfam PF01979 Amidohydrolase family 63 421 1.2E-58 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMBLS11_03600 f3a60e6958fccbd482787b7f3c70c8a0 184 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 24 166 4.4E-42 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AMBLS11_03600 f3a60e6958fccbd482787b7f3c70c8a0 184 Gene3D G3DSA:2.60.450.10 23 163 8.3E-38 T 14-10-2018 AMBLS11_03600 f3a60e6958fccbd482787b7f3c70c8a0 184 Pfam PF03968 OstA-like protein 34 143 2.2E-23 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AMBLS11_03600 f3a60e6958fccbd482787b7f3c70c8a0 184 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 166 21.874 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AMBLS11_02955 84c4efff36b0f56992c0899bfe5a1901 521 Pfam PF00916 Sulfate permease family 13 376 1.9E-54 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMBLS11_02955 84c4efff36b0f56992c0899bfe5a1901 521 Gene3D G3DSA:3.30.750.24 409 501 6.8E-29 T 14-10-2018 IPR036513 STAS domain superfamily AMBLS11_02955 84c4efff36b0f56992c0899bfe5a1901 521 Pfam PF01740 STAS domain 418 505 1.2E-10 T 14-10-2018 IPR002645 STAS domain AMBLS11_02955 84c4efff36b0f56992c0899bfe5a1901 521 SUPERFAMILY SSF52091 416 500 3.73E-14 T 14-10-2018 IPR036513 STAS domain superfamily AMBLS11_02405 323236ea1d2750254c21556c24fa2003 468 SUPERFAMILY SSF53720 22 455 8.51E-117 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_02405 323236ea1d2750254c21556c24fa2003 468 Gene3D G3DSA:3.40.605.10 26 440 1.7E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_02405 323236ea1d2750254c21556c24fa2003 468 Pfam PF00171 Aldehyde dehydrogenase family 25 440 1.5E-81 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMBLS11_02405 323236ea1d2750254c21556c24fa2003 468 PIRSF PIRSF036492 6 468 7.6E-191 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AMBLS11_02405 323236ea1d2750254c21556c24fa2003 468 Gene3D G3DSA:3.40.309.10 225 420 1.7E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMBLS11_02405 323236ea1d2750254c21556c24fa2003 468 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 221 228 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMBLS11_10045 383723c2e60aacc3d1362093bbb25d27 243 Pfam PF13649 Methyltransferase domain 60 158 2.4E-12 T 14-10-2018 AMBLS11_10045 383723c2e60aacc3d1362093bbb25d27 243 SUPERFAMILY SSF53335 19 242 4.97E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_10045 383723c2e60aacc3d1362093bbb25d27 243 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 38.878 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AMBLS11_10045 383723c2e60aacc3d1362093bbb25d27 243 PIRSF PIRSF006325 1 243 2.4E-98 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AMBLS11_10045 383723c2e60aacc3d1362093bbb25d27 243 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 242 1.6E-95 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AMBLS11_10045 383723c2e60aacc3d1362093bbb25d27 243 Gene3D G3DSA:3.40.50.150 18 243 9.8E-57 T 14-10-2018 AMBLS11_13770 e4a555491529d6269da7b33694f70dc1 301 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 265 2.3E-22 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AMBLS11_13770 e4a555491529d6269da7b33694f70dc1 301 Gene3D G3DSA:3.30.420.40 121 268 1.5E-64 T 14-10-2018 AMBLS11_13770 e4a555491529d6269da7b33694f70dc1 301 Gene3D G3DSA:3.30.420.40 6 120 1.5E-64 T 14-10-2018 AMBLS11_13770 e4a555491529d6269da7b33694f70dc1 301 SUPERFAMILY SSF53067 6 117 3.96E-21 T 14-10-2018 AMBLS11_13770 e4a555491529d6269da7b33694f70dc1 301 SUPERFAMILY SSF53067 120 290 2.75E-30 T 14-10-2018 AMBLS11_18275 714cbc5d1c63b7a1f54affe7f5988d8b 159 Pfam PF04612 Type II secretion system (T2SS), protein M 1 157 1.1E-44 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AMBLS11_18275 714cbc5d1c63b7a1f54affe7f5988d8b 159 Gene3D G3DSA:3.30.1360.100 82 159 5.7E-24 T 14-10-2018 AMBLS11_18275 714cbc5d1c63b7a1f54affe7f5988d8b 159 PIRSF PIRSF006291 1 159 3.4E-49 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AMBLS11_18275 714cbc5d1c63b7a1f54affe7f5988d8b 159 SUPERFAMILY SSF103054 82 157 1.02E-21 T 14-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily AMBLS11_10550 9df9e704936c5efd18a6b020ad5c061e 406 Gene3D G3DSA:3.40.640.10 53 294 3.3E-141 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_10550 9df9e704936c5efd18a6b020ad5c061e 406 Gene3D G3DSA:3.90.1150.10 22 398 3.3E-141 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_10550 9df9e704936c5efd18a6b020ad5c061e 406 SUPERFAMILY SSF53383 7 401 2.63E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_10550 9df9e704936c5efd18a6b020ad5c061e 406 Pfam PF00155 Aminotransferase class I and II 36 381 5.4E-55 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_02420 ae5a8fe677da30fb1034d5025009bbe2 156 Pfam PF01936 NYN domain 4 150 2.3E-37 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type AMBLS11_02420 ae5a8fe677da30fb1034d5025009bbe2 156 Gene3D G3DSA:3.40.50.1010 1 156 3.5E-49 T 14-10-2018 AMBLS11_07780 1acdbf35f8f4140509ae0546194976b6 408 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 407 2.5E-119 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AMBLS11_07780 1acdbf35f8f4140509ae0546194976b6 408 Pfam PF12704 MacB-like periplasmic core domain 28 230 7.6E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMBLS11_07780 1acdbf35f8f4140509ae0546194976b6 408 Pfam PF02687 FtsX-like permease family 297 403 9.8E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMBLS11_07565 0252a8dafdc35b21a3eba19c4dde8e1d 213 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 6 200 3.6E-14 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 AMBLS11_07565 0252a8dafdc35b21a3eba19c4dde8e1d 213 Gene3D G3DSA:1.10.1760.20 3 200 2.4E-6 T 14-10-2018 AMBLS11_18125 29b3f35246b9395cb3384f5906dea88e 97 Gene3D G3DSA:4.10.490.10 32 95 7.6E-17 T 14-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 AMBLS11_18125 29b3f35246b9395cb3384f5906dea88e 97 SUPERFAMILY SSF57652 34 95 4.32E-19 T 14-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 AMBLS11_18125 29b3f35246b9395cb3384f5906dea88e 97 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 26 1.0E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMBLS11_18125 29b3f35246b9395cb3384f5906dea88e 97 Pfam PF01355 High potential iron-sulfur protein 38 93 3.0E-15 T 14-10-2018 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 AMBLS11_18190 10967b611265b44153fcafb77de12b8b 240 SUPERFAMILY SSF52172 5 128 3.42E-42 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_18190 10967b611265b44153fcafb77de12b8b 240 Pfam PF00072 Response regulator receiver domain 8 117 2.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_18190 10967b611265b44153fcafb77de12b8b 240 SMART SM00862 157 233 2.4E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_18190 10967b611265b44153fcafb77de12b8b 240 Gene3D G3DSA:1.10.10.10 131 240 3.1E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_18190 10967b611265b44153fcafb77de12b8b 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 2.0E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_18190 10967b611265b44153fcafb77de12b8b 240 SUPERFAMILY SSF46894 139 235 1.02E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_18190 10967b611265b44153fcafb77de12b8b 240 Gene3D G3DSA:3.40.50.2300 1 127 4.9E-40 T 14-10-2018 AMBLS11_18190 10967b611265b44153fcafb77de12b8b 240 SMART SM00448 6 117 2.5E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_01250 e3e341514c58be1224373877a31654a8 304 Pfam PF05425 Copper resistance protein D 197 296 4.3E-15 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 AMBLS11_07840 a9a79d2fc4cba6c6feaeb527c82990a2 154 SUPERFAMILY SSF55729 1 148 8.41E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_07840 a9a79d2fc4cba6c6feaeb527c82990a2 154 Pfam PF13673 Acetyltransferase (GNAT) domain 37 148 1.1E-17 T 14-10-2018 IPR000182 GNAT domain AMBLS11_07840 a9a79d2fc4cba6c6feaeb527c82990a2 154 Gene3D G3DSA:3.40.630.30 1 149 2.5E-44 T 14-10-2018 AMBLS11_10700 3f3270eb31589625afd0ce43e29b1a9e 310 SUPERFAMILY SSF53850 114 259 3.58E-14 T 14-10-2018 AMBLS11_10700 3f3270eb31589625afd0ce43e29b1a9e 310 Gene3D G3DSA:3.40.190.10 140 261 4.9E-5 T 14-10-2018 AMBLS11_06965 bd0533e826d7bd9c378555f9b7817482 282 Gene3D G3DSA:1.20.1080.10 1 249 1.9E-66 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMBLS11_06965 bd0533e826d7bd9c378555f9b7817482 282 Pfam PF01226 Formate/nitrite transporter 9 257 2.6E-64 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_01550 701812624adcfe31951332e92e306203 167 SMART SM00260 13 150 7.9E-41 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_01550 701812624adcfe31951332e92e306203 167 SUPERFAMILY SSF50341 15 153 6.41E-38 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMBLS11_01550 701812624adcfe31951332e92e306203 167 Gene3D G3DSA:2.30.30.40 20 144 4.7E-39 T 14-10-2018 AMBLS11_01550 701812624adcfe31951332e92e306203 167 Pfam PF01584 CheW-like domain 17 152 1.3E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_01550 701812624adcfe31951332e92e306203 167 Gene3D G3DSA:2.40.50.180 36 145 4.7E-39 T 14-10-2018 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 SUPERFAMILY SSF55781 18 161 4.32E-15 T 14-10-2018 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 SUPERFAMILY SSF55874 260 402 4.58E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 399 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 344 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 358 2.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 Gene3D G3DSA:1.10.287.130 167 246 8.5E-11 T 14-10-2018 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 400 2.6E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 SMART SM00388 175 248 1.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 SUPERFAMILY SSF47384 164 244 2.55E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 Gene3D G3DSA:3.30.450.40 8 166 1.1E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 177 243 7.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 Gene3D G3DSA:3.30.565.10 254 407 9.0E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_17440 d49711ead84bb06ed09fb07ce885ca76 413 SMART SM00387 293 402 5.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_11380 b1f5b1a041b22a3b4085675246467d54 589 Gene3D G3DSA:3.30.479.30 71 190 4.9E-24 T 14-10-2018 AMBLS11_11380 b1f5b1a041b22a3b4085675246467d54 589 Pfam PF15975 Flotillin 418 540 9.1E-33 T 14-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 AMBLS11_11380 b1f5b1a041b22a3b4085675246467d54 589 Pfam PF01145 SPFH domain / Band 7 family 44 217 8.0E-18 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_11380 b1f5b1a041b22a3b4085675246467d54 589 SUPERFAMILY SSF117892 62 203 5.23E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily AMBLS11_11380 b1f5b1a041b22a3b4085675246467d54 589 SMART SM00244 31 200 9.2E-4 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_12105 10a03d67c4a7b21b044321e0799ce918 203 Pfam PF08281 Sigma-70, region 4 143 195 6.9E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_12105 10a03d67c4a7b21b044321e0799ce918 203 Gene3D G3DSA:1.10.1740.10 24 106 2.5E-22 T 14-10-2018 AMBLS11_12105 10a03d67c4a7b21b044321e0799ce918 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 199 6.5E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_12105 10a03d67c4a7b21b044321e0799ce918 203 SUPERFAMILY SSF88659 139 200 1.74E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_12105 10a03d67c4a7b21b044321e0799ce918 203 Gene3D G3DSA:1.10.10.10 135 203 4.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_12105 10a03d67c4a7b21b044321e0799ce918 203 Pfam PF04542 Sigma-70 region 2 43 109 7.8E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_12105 10a03d67c4a7b21b044321e0799ce918 203 SUPERFAMILY SSF88946 27 122 1.18E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 SUPERFAMILY SSF52374 5 675 7.97E-147 T 14-10-2018 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 866 23.804 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 172 1.9E-27 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 578 4.8E-9 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 625 661 4.6E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Gene3D G3DSA:3.40.50.620 34 572 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 SUPERFAMILY SSF50677 227 421 3.77E-52 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 866 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Gene3D G3DSA:1.10.730.10 9 798 0.0 T 14-10-2018 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Gene3D G3DSA:3.10.20.590 806 866 5.0E-24 T 14-10-2018 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Pfam PF08264 Anticodon-binding domain of tRNA 707 829 4.6E-19 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 SUPERFAMILY SSF47323 669 866 1.87E-38 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 223 410 8.5E-77 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 1.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 563 573 1.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 1.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 491 509 1.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 1.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 530 552 1.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 1.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Gene3D G3DSA:3.90.740.10 228 420 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMBLS11_08495 5ad2bc55dc1f36a01ce6e923e94356b7 867 Gene3D G3DSA:3.10.330.110 573 635 0.0 T 14-10-2018 AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 3.6E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 60 75 3.6E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 Gene3D G3DSA:3.40.50.300 4 184 5.4E-50 T 14-10-2018 AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 SUPERFAMILY SSF54814 182 297 9.94E-44 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 Gene3D G3DSA:3.30.300.20 186 302 2.0E-43 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 Hamap MF_00367 GTPase Era [era]. 6 297 36.014 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 1.6E-103 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 SUPERFAMILY SSF52540 11 206 5.96E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.0E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 Pfam PF07650 KH domain 209 285 4.3E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_12255 1d958e2fb7e6a9afe5078b79eeff3a16 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 170 3.9E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 SMART SM01274 17 150 3.4E-72 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 SUPERFAMILY SSF53223 9 160 1.51E-51 T 14-10-2018 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 PIRSF PIRSF000106 41 411 7.2E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 Gene3D G3DSA:3.40.50.10380 1 159 6.2E-67 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 Pfam PF03949 Malic enzyme, NAD binding domain 164 356 9.1E-26 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 Pfam PF00390 Malic enzyme, N-terminal domain 29 149 3.3E-25 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 SMART SM00919 162 398 3.0E-139 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 Gene3D G3DSA:3.40.50.720 160 411 7.1E-84 T 14-10-2018 AMBLS11_16715 f3464dc7310e3111bd2acdddadd92070 411 SUPERFAMILY SSF51735 162 406 9.34E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15895 e455e022d96173b2326e4c132431fab7 82 Gene3D G3DSA:2.30.30.320 2 81 4.3E-28 T 14-10-2018 IPR037135 DUF1653-like domain superfamily AMBLS11_15895 e455e022d96173b2326e4c132431fab7 82 Pfam PF07866 Protein of unknown function (DUF1653) 11 70 9.5E-28 T 14-10-2018 IPR023387 DUF1653-like domain AMBLS11_10450 b95e606984f8a5bdeab2f52095e46085 308 Gene3D G3DSA:3.40.50.1220 183 308 1.9E-58 T 14-10-2018 AMBLS11_10450 b95e606984f8a5bdeab2f52095e46085 308 SUPERFAMILY SSF52467 188 306 2.2E-48 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMBLS11_10450 b95e606984f8a5bdeab2f52095e46085 308 SUPERFAMILY SSF52402 2 183 1.4E-58 T 14-10-2018 AMBLS11_10450 b95e606984f8a5bdeab2f52095e46085 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AMBLS11_10450 b95e606984f8a5bdeab2f52095e46085 308 Pfam PF01012 Electron transfer flavoprotein domain 3 168 7.3E-39 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMBLS11_10450 b95e606984f8a5bdeab2f52095e46085 308 PIRSF PIRSF000089 1 308 7.2E-108 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AMBLS11_10450 b95e606984f8a5bdeab2f52095e46085 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 1.6E-36 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AMBLS11_10450 b95e606984f8a5bdeab2f52095e46085 308 SMART SM00893 3 181 3.1E-53 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMBLS11_10450 b95e606984f8a5bdeab2f52095e46085 308 Gene3D G3DSA:3.40.50.620 2 182 1.3E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_14075 3ca7b6e2145bdbbffe4099fc89b7cd91 111 Pfam PF04999 Cell division protein FtsL 18 109 1.1E-29 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AMBLS11_14075 3ca7b6e2145bdbbffe4099fc89b7cd91 111 Hamap MF_00910 Cell division protein FtsL [ftsL]. 25 108 15.817 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AMBLS11_14075 3ca7b6e2145bdbbffe4099fc89b7cd91 111 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 26 108 2.1E-19 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AMBLS11_10725 ed87884a464a73237b8ca9532fd46359 391 Gene3D G3DSA:3.40.50.720 8 173 2.0E-37 T 14-10-2018 AMBLS11_10725 ed87884a464a73237b8ca9532fd46359 391 SUPERFAMILY SSF51735 9 162 9.03E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_10725 ed87884a464a73237b8ca9532fd46359 391 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 9 137 2.8E-16 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 Gene3D G3DSA:3.40.50.720 188 326 9.3E-153 T 14-10-2018 AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 Pfam PF00107 Zinc-binding dehydrogenase 211 330 7.6E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 SUPERFAMILY SSF51735 174 348 5.97E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 SUPERFAMILY SSF50129 13 199 6.78E-73 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 SMART SM00829 24 381 0.0018 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 SUPERFAMILY SSF50129 332 382 3.15E-11 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 42 168 9.1E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 75 89 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 Gene3D G3DSA:3.90.180.10 20 378 9.3E-153 T 14-10-2018 AMBLS11_14350 2d0404771c04c8ede3f10d10efd10a05 385 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 16 383 2.6E-226 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AMBLS11_07510 5cf9507c5dd42412f65a4a7761e7ec00 156 SUPERFAMILY SSF55826 2 153 1.7E-40 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMBLS11_07510 5cf9507c5dd42412f65a4a7761e7ec00 156 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 6.4E-52 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMBLS11_07510 5cf9507c5dd42412f65a4a7761e7ec00 156 Pfam PF04073 Aminoacyl-tRNA editing domain 32 144 5.4E-22 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMBLS11_07510 5cf9507c5dd42412f65a4a7761e7ec00 156 PIRSF PIRSF006181 1 156 3.3E-51 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMBLS11_07510 5cf9507c5dd42412f65a4a7761e7ec00 156 Gene3D G3DSA:3.90.960.10 1 155 1.3E-52 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMBLS11_01585 bb6063064fe8b68a4bd0eab3372ae854 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 192 2.5E-16 T 14-10-2018 AMBLS11_01585 bb6063064fe8b68a4bd0eab3372ae854 224 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 4 198 6.6E-52 T 14-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 AMBLS11_01585 bb6063064fe8b68a4bd0eab3372ae854 224 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 6 185 7.8E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_01585 bb6063064fe8b68a4bd0eab3372ae854 224 Gene3D G3DSA:3.40.50.1000 6 217 1.4E-67 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_01585 bb6063064fe8b68a4bd0eab3372ae854 224 Gene3D G3DSA:1.10.150.240 17 91 1.4E-67 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMBLS11_01585 bb6063064fe8b68a4bd0eab3372ae854 224 SUPERFAMILY SSF56784 3 217 5.33E-41 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_06335 b0744ae153a01a104863be8f58cb0cf0 374 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 321 1.5E-20 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMBLS11_06335 b0744ae153a01a104863be8f58cb0cf0 374 Pfam PF04055 Radical SAM superfamily 61 214 1.8E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_06335 b0744ae153a01a104863be8f58cb0cf0 374 SMART SM00876 231 323 2.3E-46 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMBLS11_06335 b0744ae153a01a104863be8f58cb0cf0 374 TIGRFAM TIGR00433 bioB: biotin synthase 26 321 1.2E-125 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMBLS11_06335 b0744ae153a01a104863be8f58cb0cf0 374 Gene3D G3DSA:3.20.20.70 15 326 1.1E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_06335 b0744ae153a01a104863be8f58cb0cf0 374 SUPERFAMILY SSF102114 16 321 1.57E-92 T 14-10-2018 AMBLS11_06335 b0744ae153a01a104863be8f58cb0cf0 374 PIRSF PIRSF001619 1 330 3.5E-138 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMBLS11_06335 b0744ae153a01a104863be8f58cb0cf0 374 Hamap MF_01694 Biotin synthase [bioB]. 16 324 42.504 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMBLS11_06335 b0744ae153a01a104863be8f58cb0cf0 374 SMART SM00729 54 266 1.9E-37 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 SUPERFAMILY SSF50715 340 548 8.89E-74 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 Gene3D G3DSA:2.40.240.10 348 466 1.1E-77 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 Gene3D G3DSA:1.10.1160.10 261 339 5.1E-35 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 2.0E-271 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 SUPERFAMILY SSF52374 28 346 3.21E-97 T 14-10-2018 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 Gene3D G3DSA:2.40.240.10 340 547 1.1E-77 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.6E-117 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 Gene3D G3DSA:3.90.800.10 101 209 1.0E-102 T 14-10-2018 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 Gene3D G3DSA:3.40.50.620 28 247 1.0E-102 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 530 1.6E-58 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 3.5E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 3.5E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 3.5E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 3.5E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_08995 7d497adabb08dabe202f4b74be867052 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 51.739 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AMBLS11_01730 3384878b26518a8d70f2a65252b5d94e 99 SUPERFAMILY SSF54189 3 92 1.22E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_01730 3384878b26518a8d70f2a65252b5d94e 99 Pfam PF00276 Ribosomal protein L23 8 94 5.0E-33 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMBLS11_01730 3384878b26518a8d70f2a65252b5d94e 99 Gene3D G3DSA:3.30.70.330 1 99 1.6E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMBLS11_01730 3384878b26518a8d70f2a65252b5d94e 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.883 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMBLS11_15165 5a7d2ec50d42a7d0f6328c2bb7650577 185 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 1.7E-35 T 14-10-2018 IPR010835 Protein of unknown function DUF1439 AMBLS11_15165 5a7d2ec50d42a7d0f6328c2bb7650577 185 Gene3D G3DSA:3.15.10.40 13 182 2.2E-37 T 14-10-2018 AMBLS11_18305 aee01f7abcbeb1298fbd01d28f40945e 237 Gene3D G3DSA:3.40.50.1000 8 205 1.8E-22 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_18305 aee01f7abcbeb1298fbd01d28f40945e 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 191 5.2E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_18305 aee01f7abcbeb1298fbd01d28f40945e 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 193 3.8E-11 T 14-10-2018 AMBLS11_18305 aee01f7abcbeb1298fbd01d28f40945e 237 SUPERFAMILY SSF56784 5 217 1.94E-40 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_18305 aee01f7abcbeb1298fbd01d28f40945e 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 3.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_18305 aee01f7abcbeb1298fbd01d28f40945e 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 3.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_18305 aee01f7abcbeb1298fbd01d28f40945e 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 3.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_18305 aee01f7abcbeb1298fbd01d28f40945e 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 3.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_05475 c8b58303e23471f0a1aff9bdee9a2f96 404 Gene3D G3DSA:3.60.10.10 29 403 3.6E-20 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_05475 c8b58303e23471f0a1aff9bdee9a2f96 404 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 33 391 8.2E-24 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMBLS11_05475 c8b58303e23471f0a1aff9bdee9a2f96 404 SUPERFAMILY SSF56219 30 398 1.44E-21 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_08035 c80f7f477a801eec8e539ba5ff96e06a 149 SUPERFAMILY SSF54637 6 146 9.82E-33 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_08035 c80f7f477a801eec8e539ba5ff96e06a 149 Gene3D G3DSA:3.10.129.10 3 146 4.6E-36 T 14-10-2018 AMBLS11_08035 c80f7f477a801eec8e539ba5ff96e06a 149 Pfam PF01575 MaoC like domain 9 122 2.3E-26 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMBLS11_03545 14b5dca5740268c3e28fb3767288a02f 157 Gene3D G3DSA:2.30.30.220 1 127 2.6E-48 T 14-10-2018 IPR036760 SspB-like superfamily AMBLS11_03545 14b5dca5740268c3e28fb3767288a02f 157 Pfam PF04386 Stringent starvation protein B 7 157 2.2E-37 T 14-10-2018 IPR007481 Stringent starvation protein B AMBLS11_03545 14b5dca5740268c3e28fb3767288a02f 157 PIRSF PIRSF005276 1 157 3.0E-52 T 14-10-2018 IPR007481 Stringent starvation protein B AMBLS11_03545 14b5dca5740268c3e28fb3767288a02f 157 SUPERFAMILY SSF101738 1 113 9.16E-43 T 14-10-2018 IPR036760 SspB-like superfamily AMBLS11_02460 aef0e84aa962110764f8a52e8a2bcbc2 238 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 188 2.6E-33 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 Gene3D G3DSA:3.40.50.300 1 213 1.5E-78 T 14-10-2018 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 PRINTS PR00094 Adenylate kinase signature 173 187 3.1E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.1E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.1E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.1E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 PRINTS PR00094 Adenylate kinase signature 156 171 3.1E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 7.9E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 Pfam PF00406 Adenylate kinase 5 185 1.9E-58 T 14-10-2018 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 SUPERFAMILY SSF52540 1 209 6.43E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 211 5.0E-75 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMBLS11_11910 a701da2b782cb8f20c359cf08d558b65 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 50.997 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 8 603 4.2E-242 T 14-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 Gene3D G3DSA:2.60.40.420 172 366 3.1E-40 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 Pfam PF07732 Multicopper oxidase 66 166 5.8E-37 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 Gene3D G3DSA:2.60.40.420 42 164 1.8E-36 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 SUPERFAMILY SSF49503 171 382 2.89E-54 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 Pfam PF00394 Multicopper oxidase 174 345 6.7E-31 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 SUPERFAMILY SSF49503 449 603 3.32E-36 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 SUPERFAMILY SSF49503 62 194 1.81E-35 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 Pfam PF07731 Multicopper oxidase 488 603 1.2E-25 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMBLS11_01455 ec2963b4cb701cccbe75c18ccd65b6be 604 ProSitePatterns PS00080 Multicopper oxidases signature 2. 586 597 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMBLS11_15450 fb4318cdf1b58ab2c60ed94e5a85aa51 738 SUPERFAMILY SSF56024 8 252 6.91E-27 T 14-10-2018 AMBLS11_15450 fb4318cdf1b58ab2c60ed94e5a85aa51 738 SUPERFAMILY SSF56024 260 432 1.03E-20 T 14-10-2018 AMBLS11_15450 fb4318cdf1b58ab2c60ed94e5a85aa51 738 Pfam PF09335 SNARE associated Golgi protein 558 674 7.4E-19 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMBLS11_15450 fb4318cdf1b58ab2c60ed94e5a85aa51 738 Gene3D G3DSA:3.30.870.10 11 230 1.4E-24 T 14-10-2018 AMBLS11_15450 fb4318cdf1b58ab2c60ed94e5a85aa51 738 Pfam PF00614 Phospholipase D Active site motif 132 155 5.5E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMBLS11_15450 fb4318cdf1b58ab2c60ed94e5a85aa51 738 Gene3D G3DSA:3.30.870.10 256 417 1.5E-18 T 14-10-2018 AMBLS11_15450 fb4318cdf1b58ab2c60ed94e5a85aa51 738 Pfam PF13091 PLD-like domain 267 399 1.3E-12 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMBLS11_15450 fb4318cdf1b58ab2c60ed94e5a85aa51 738 SMART SM00155 132 159 0.0071 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMBLS11_15450 fb4318cdf1b58ab2c60ed94e5a85aa51 738 SMART SM00155 358 385 8.1E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 2.4E-14 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 180 200 2.4E-14 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 290 301 2.4E-14 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 SMART SM00839 149 352 2.4E-71 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 SUPERFAMILY SSF51735 150 348 2.34E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 PIRSF PIRSF000188 1 352 3.1E-139 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 Gene3D G3DSA:3.40.50.720 134 341 1.4E-134 T 14-10-2018 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 Gene3D G3DSA:3.40.50.10860 11 348 1.4E-134 T 14-10-2018 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 221 341 3.6E-12 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 154 203 6.7E-5 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 SUPERFAMILY SSF53223 4 140 8.0E-41 T 14-10-2018 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_05270 2e278cfbc1376e9c296cd8ed1bec9a3c 352 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 132 4.2E-26 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMBLS11_17465 912d7a8b6eae5c2df37e9681022d0228 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 505 1.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_17465 912d7a8b6eae5c2df37e9681022d0228 506 SUPERFAMILY SSF55874 356 505 2.49E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_17465 912d7a8b6eae5c2df37e9681022d0228 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 1.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17465 912d7a8b6eae5c2df37e9681022d0228 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 1.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17465 912d7a8b6eae5c2df37e9681022d0228 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 1.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17465 912d7a8b6eae5c2df37e9681022d0228 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 464 1.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_17465 912d7a8b6eae5c2df37e9681022d0228 506 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 356 5.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_17465 912d7a8b6eae5c2df37e9681022d0228 506 Gene3D G3DSA:3.30.565.10 359 506 3.2E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_17465 912d7a8b6eae5c2df37e9681022d0228 506 SMART SM00387 399 506 2.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_17785 cb61461f26d41bc997db453e9a1b4e9f 346 Gene3D G3DSA:3.30.360.10 124 329 1.5E-111 T 14-10-2018 AMBLS11_17785 cb61461f26d41bc997db453e9a1b4e9f 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 1.5E-21 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMBLS11_17785 cb61461f26d41bc997db453e9a1b4e9f 346 SUPERFAMILY SSF55347 127 274 2.13E-26 T 14-10-2018 AMBLS11_17785 cb61461f26d41bc997db453e9a1b4e9f 346 Gene3D G3DSA:3.40.50.720 3 316 1.5E-111 T 14-10-2018 AMBLS11_17785 cb61461f26d41bc997db453e9a1b4e9f 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 131 233 1.7E-15 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMBLS11_17785 cb61461f26d41bc997db453e9a1b4e9f 346 SUPERFAMILY SSF51735 5 165 4.37E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15985 ac4c620848f64cb5d88c4c36e7e34d06 1008 SUPERFAMILY SSF56935 114 972 3.37E-59 T 14-10-2018 AMBLS11_15985 ac4c620848f64cb5d88c4c36e7e34d06 1008 Gene3D G3DSA:2.170.130.10 115 240 1.8E-6 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_15985 ac4c620848f64cb5d88c4c36e7e34d06 1008 Gene3D G3DSA:2.60.40.1120 33 114 5.5E-5 T 14-10-2018 AMBLS11_15985 ac4c620848f64cb5d88c4c36e7e34d06 1008 Pfam PF00593 TonB dependent receptor 443 970 2.6E-4 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_15985 ac4c620848f64cb5d88c4c36e7e34d06 1008 SUPERFAMILY SSF49464 33 126 3.02E-8 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AMBLS11_15985 ac4c620848f64cb5d88c4c36e7e34d06 1008 Gene3D G3DSA:2.40.170.20 282 649 4.3E-17 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_15985 ac4c620848f64cb5d88c4c36e7e34d06 1008 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 109 9.1E-14 T 14-10-2018 AMBLS11_11770 0180f6591636857b187ef761b976c742 352 SUPERFAMILY SSF55961 144 350 2.35E-36 T 14-10-2018 AMBLS11_11770 0180f6591636857b187ef761b976c742 352 Gene3D G3DSA:2.102.10.10 27 137 9.9E-32 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMBLS11_11770 0180f6591636857b187ef761b976c742 352 Pfam PF00355 Rieske [2Fe-2S] domain 48 111 7.3E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMBLS11_11770 0180f6591636857b187ef761b976c742 352 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 159 350 6.5E-27 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 AMBLS11_11770 0180f6591636857b187ef761b976c742 352 SUPERFAMILY SSF50022 8 131 9.43E-24 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMBLS11_11770 0180f6591636857b187ef761b976c742 352 Gene3D G3DSA:3.90.380.10 11 348 9.9E-32 T 14-10-2018 AMBLS11_07420 37a098242c83fbead123949703391bb8 326 SUPERFAMILY SSF53448 24 249 1.45E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07420 37a098242c83fbead123949703391bb8 326 Pfam PF00535 Glycosyl transferase family 2 32 182 8.0E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_07420 37a098242c83fbead123949703391bb8 326 Gene3D G3DSA:3.90.550.10 14 243 5.7E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04450 d47ac62392f8db60afbbba2dce2112c8 104 Pfam PF12836 Helix-hairpin-helix motif 39 101 5.5E-22 T 14-10-2018 AMBLS11_04450 d47ac62392f8db60afbbba2dce2112c8 104 SUPERFAMILY SSF47781 30 101 1.89E-26 T 14-10-2018 IPR010994 RuvA domain 2-like AMBLS11_04450 d47ac62392f8db60afbbba2dce2112c8 104 Gene3D G3DSA:1.10.150.280 31 103 1.4E-23 T 14-10-2018 AMBLS11_04450 d47ac62392f8db60afbbba2dce2112c8 104 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 101 3.7E-20 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AMBLS11_04450 d47ac62392f8db60afbbba2dce2112c8 104 SMART SM00278 81 100 3.7 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_04450 d47ac62392f8db60afbbba2dce2112c8 104 SMART SM00278 51 70 0.49 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMBLS11_10035 f8be80f2e2feb6d444a37f2eee50a62c 237 Gene3D G3DSA:3.40.33.10 45 185 6.0E-15 T 14-10-2018 IPR035940 CAP superfamily AMBLS11_11605 31f310c552b9b6218e7817d9294d59b4 399 Pfam PF13975 gag-polyprotein putative aspartyl protease 292 381 5.7E-17 T 14-10-2018 AMBLS11_11605 31f310c552b9b6218e7817d9294d59b4 399 SUPERFAMILY SSF50630 283 386 2.38E-11 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_11605 31f310c552b9b6218e7817d9294d59b4 399 Gene3D G3DSA:2.40.70.10 269 397 1.4E-22 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_11605 31f310c552b9b6218e7817d9294d59b4 399 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 297 308 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 Gene3D G3DSA:1.10.287.130 161 271 7.0E-19 T 14-10-2018 AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 SMART SM00387 317 427 2.0E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 421 2.2E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 Gene3D G3DSA:3.30.565.10 272 424 1.8E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 SUPERFAMILY SSF47384 193 271 3.14E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 SUPERFAMILY SSF55874 262 423 1.44E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 269 4.9E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 3.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03500 847dbc8fc90e8d4f6e7dffed0c7ad98d 429 SMART SM00388 210 273 3.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_05730 a86141c09d4a48790690acd8a44274ed 425 PIRSF PIRSF006603 1 423 1.9E-104 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_05730 a86141c09d4a48790690acd8a44274ed 425 TIGRFAM TIGR00797 matE: MATE efflux family protein 2 385 5.8E-56 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_05730 a86141c09d4a48790690acd8a44274ed 425 Pfam PF01554 MatE 2 153 2.2E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_05730 a86141c09d4a48790690acd8a44274ed 425 Pfam PF01554 MatE 218 377 2.6E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMBLS11_00440 1ba457c0287c66569c9e4414b2af1fb5 406 SUPERFAMILY SSF47203 250 405 2.58E-44 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMBLS11_00440 1ba457c0287c66569c9e4414b2af1fb5 406 SUPERFAMILY SSF56645 2 264 5.5E-62 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMBLS11_00440 1ba457c0287c66569c9e4414b2af1fb5 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 239 4.9E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMBLS11_00440 1ba457c0287c66569c9e4414b2af1fb5 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 1.3E-32 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMBLS11_00440 1ba457c0287c66569c9e4414b2af1fb5 406 Gene3D G3DSA:1.20.140.10 252 405 3.9E-39 T 14-10-2018 AMBLS11_00440 1ba457c0287c66569c9e4414b2af1fb5 406 Gene3D G3DSA:1.10.540.10 1 136 1.1E-48 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMBLS11_00440 1ba457c0287c66569c9e4414b2af1fb5 406 Gene3D G3DSA:2.40.110.10 137 251 7.2E-38 T 14-10-2018 AMBLS11_00440 1ba457c0287c66569c9e4414b2af1fb5 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 134 1.3E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMBLS11_06210 99a68b69faac63241334853e8689ea8d 532 Gene3D G3DSA:3.30.70.270 359 516 6.1E-46 T 14-10-2018 AMBLS11_06210 99a68b69faac63241334853e8689ea8d 532 SMART SM00267 350 516 9.0E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06210 99a68b69faac63241334853e8689ea8d 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 358 512 1.8E-38 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06210 99a68b69faac63241334853e8689ea8d 532 Gene3D G3DSA:3.30.450.20 219 358 3.8E-12 T 14-10-2018 AMBLS11_06210 99a68b69faac63241334853e8689ea8d 532 SUPERFAMILY SSF55785 221 348 1.74E-10 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_06210 99a68b69faac63241334853e8689ea8d 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 512 1.6E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06210 99a68b69faac63241334853e8689ea8d 532 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 356 7.2E-8 T 14-10-2018 IPR000014 PAS domain AMBLS11_06210 99a68b69faac63241334853e8689ea8d 532 SUPERFAMILY SSF55073 366 511 1.1E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_08325 e8437e370581b4baab95ba83d6197d02 152 Gene3D G3DSA:3.40.630.30 2 138 5.9E-25 T 14-10-2018 AMBLS11_08325 e8437e370581b4baab95ba83d6197d02 152 Pfam PF13673 Acetyltransferase (GNAT) domain 39 136 2.1E-8 T 14-10-2018 IPR000182 GNAT domain AMBLS11_08325 e8437e370581b4baab95ba83d6197d02 152 SUPERFAMILY SSF55729 3 142 2.66E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 5.0E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 SUPERFAMILY SSF50249 3 123 1.63E-50 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.7E-69 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 Gene3D G3DSA:2.40.50.140 1 124 2.1E-62 T 14-10-2018 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.9E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.9E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.9E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.9E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.9E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.9E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.02 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 PIRSF PIRSF002133 1 124 7.5E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_17020 3d27b2ecb5ea02ba6eaa1b4933358519 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_08150 f287b44051a754368c3e9664b7bfc212 720 Gene3D G3DSA:2.170.130.10 44 176 3.5E-24 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_08150 f287b44051a754368c3e9664b7bfc212 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 720 4.3E-78 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMBLS11_08150 f287b44051a754368c3e9664b7bfc212 720 SUPERFAMILY SSF56935 37 720 2.16E-115 T 14-10-2018 AMBLS11_08150 f287b44051a754368c3e9664b7bfc212 720 Pfam PF00593 TonB dependent receptor 256 719 1.7E-51 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_08150 f287b44051a754368c3e9664b7bfc212 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 167 1.3E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_08150 f287b44051a754368c3e9664b7bfc212 720 Gene3D G3DSA:2.40.170.20 177 720 4.1E-113 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_14860 214f32c9270c34293bccc4e269fd606e 379 Pfam PF13487 HD domain 261 321 2.7E-14 T 14-10-2018 AMBLS11_14860 214f32c9270c34293bccc4e269fd606e 379 Gene3D G3DSA:1.10.3210.10 189 375 1.4E-42 T 14-10-2018 AMBLS11_14860 214f32c9270c34293bccc4e269fd606e 379 Pfam PF01627 Hpt domain 13 104 6.6E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_14860 214f32c9270c34293bccc4e269fd606e 379 SMART SM00073 10 107 3.2E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_14860 214f32c9270c34293bccc4e269fd606e 379 SUPERFAMILY SSF109604 196 368 4.4E-19 T 14-10-2018 AMBLS11_14860 214f32c9270c34293bccc4e269fd606e 379 Gene3D G3DSA:1.20.120.160 7 150 5.8E-24 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_14860 214f32c9270c34293bccc4e269fd606e 379 SUPERFAMILY SSF47226 12 122 1.2E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_13500 ec242bc812768119e10291a13c859798 677 SUPERFAMILY SSF56935 82 675 2.52E-60 T 14-10-2018 AMBLS11_13500 ec242bc812768119e10291a13c859798 677 Gene3D G3DSA:2.170.130.10 73 175 6.6E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_13500 ec242bc812768119e10291a13c859798 677 Pfam PF07715 TonB-dependent Receptor Plug Domain 83 163 2.2E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_13500 ec242bc812768119e10291a13c859798 677 Pfam PF00593 TonB dependent receptor 219 659 2.2E-22 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_13500 ec242bc812768119e10291a13c859798 677 Gene3D G3DSA:2.40.170.20 176 675 8.4E-46 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_12925 42293b5a0c693b66d37b959b7c7ca03d 161 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 6.6E-66 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AMBLS11_12925 42293b5a0c693b66d37b959b7c7ca03d 161 Gene3D G3DSA:1.10.10.10 1 144 2.0E-55 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_12925 42293b5a0c693b66d37b959b7c7ca03d 161 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.8E-46 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type AMBLS11_12925 42293b5a0c693b66d37b959b7c7ca03d 161 SUPERFAMILY SSF46785 2 133 7.88E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_12925 42293b5a0c693b66d37b959b7c7ca03d 161 Pfam PF02082 Transcriptional regulator 1 83 2.0E-27 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type AMBLS11_04465 892e7f20c9d894049f9d26782ee3d3a2 124 Pfam PF11399 Protein of unknown function (DUF3192) 22 119 1.5E-41 T 14-10-2018 IPR021534 Protein of unknown function DUF3192 AMBLS11_13660 f69bde81711676d62709fdfe3d38026b 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 222 1.9E-23 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMBLS11_13660 f69bde81711676d62709fdfe3d38026b 281 SUPERFAMILY SSF53790 9 250 1.57E-25 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMBLS11_13660 f69bde81711676d62709fdfe3d38026b 281 Gene3D G3DSA:3.40.1010.10 2 132 5.3E-17 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 SUPERFAMILY SSF53067 9 152 4.05E-38 T 14-10-2018 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 Gene3D G3DSA:3.30.420.40 158 321 1.4E-129 T 14-10-2018 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 SUPERFAMILY SSF53067 153 339 2.95E-49 T 14-10-2018 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 Gene3D G3DSA:3.90.640.10 190 263 1.4E-129 T 14-10-2018 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 Pfam PF06723 MreB/Mbl protein 11 337 1.1E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 Gene3D G3DSA:3.30.420.40 14 331 1.4E-129 T 14-10-2018 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.7E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.7E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.7E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.7E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.7E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMBLS11_01000 8287bc82cce6b863bdd49e24d6d1a58f 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 4.6E-166 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMBLS11_09490 a4a351fb9c8261bf54bcb094dd0de010 523 SUPERFAMILY SSF51735 387 512 2.91E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_09490 a4a351fb9c8261bf54bcb094dd0de010 523 Gene3D G3DSA:3.40.50.720 381 521 5.4E-28 T 14-10-2018 AMBLS11_09490 a4a351fb9c8261bf54bcb094dd0de010 523 Gene3D G3DSA:1.20.1530.20 3 364 9.3E-48 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMBLS11_09490 a4a351fb9c8261bf54bcb094dd0de010 523 Pfam PF00999 Sodium/hydrogen exchanger family 6 347 2.2E-40 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMBLS11_09490 a4a351fb9c8261bf54bcb094dd0de010 523 Pfam PF02254 TrkA-N domain 387 502 3.1E-19 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMBLS11_17015 cdb6adbbbe6280e7e047a5f319ff01a5 156 Gene3D G3DSA:1.10.455.10 2 155 1.6E-63 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AMBLS11_17015 cdb6adbbbe6280e7e047a5f319ff01a5 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 7.9E-70 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMBLS11_17015 cdb6adbbbe6280e7e047a5f319ff01a5 156 PIRSF PIRSF002122 3 156 5.4E-61 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMBLS11_17015 cdb6adbbbe6280e7e047a5f319ff01a5 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.0E-65 T 14-10-2018 IPR023798 Ribosomal protein S7 domain AMBLS11_17015 cdb6adbbbe6280e7e047a5f319ff01a5 156 SUPERFAMILY SSF47973 6 149 1.31E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AMBLS11_17015 cdb6adbbbe6280e7e047a5f319ff01a5 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_17015 cdb6adbbbe6280e7e047a5f319ff01a5 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.814 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMBLS11_16720 e9dc349794aa49f7beb6ba95dfb29bf3 96 SUPERFAMILY SSF47598 3 87 4.45E-44 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMBLS11_16720 e9dc349794aa49f7beb6ba95dfb29bf3 96 Pfam PF01340 Met Apo-repressor, MetJ 3 85 2.0E-47 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AMBLS11_16720 e9dc349794aa49f7beb6ba95dfb29bf3 96 Gene3D G3DSA:1.10.140.10 1 90 1.9E-43 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily AMBLS11_16720 e9dc349794aa49f7beb6ba95dfb29bf3 96 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 3 85 3.0E-37 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AMBLS11_02520 a08f4eddc28c3ab13371774b1f14de57 144 SUPERFAMILY SSF74653 44 103 3.73E-11 T 14-10-2018 AMBLS11_02520 a08f4eddc28c3ab13371774b1f14de57 144 Gene3D G3DSA:3.30.1150.10 25 123 5.2E-12 T 14-10-2018 AMBLS11_02520 a08f4eddc28c3ab13371774b1f14de57 144 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 48 109 9.4E-11 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMBLS11_01690 b80b974159bfd3e941f339483391d361 333 SUPERFAMILY SSF56752 2 328 9.55E-82 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMBLS11_01690 b80b974159bfd3e941f339483391d361 333 Gene3D G3DSA:3.30.470.10 4 327 1.6E-95 T 14-10-2018 AMBLS11_01690 b80b974159bfd3e941f339483391d361 333 PIRSF PIRSF006468 2 333 5.1E-100 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AMBLS11_01690 b80b974159bfd3e941f339483391d361 333 Pfam PF01063 Amino-transferase class IV 48 285 7.3E-29 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMBLS11_01690 b80b974159bfd3e941f339483391d361 333 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 22 331 7.8E-101 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AMBLS11_01690 b80b974159bfd3e941f339483391d361 333 Gene3D G3DSA:3.20.10.10 150 314 1.6E-95 T 14-10-2018 AMBLS11_06275 de2fc32da9dd823295de2b0e440329ee 200 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 42 194 1.9E-27 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AMBLS11_06275 de2fc32da9dd823295de2b0e440329ee 200 SUPERFAMILY SSF159594 40 198 2.62E-18 T 14-10-2018 AMBLS11_04880 ed7a025fc99012cfcef5ff8753d47061 375 Gene3D G3DSA:3.90.25.10 195 353 1.7E-163 T 14-10-2018 AMBLS11_04880 ed7a025fc99012cfcef5ff8753d47061 375 SUPERFAMILY SSF51735 5 352 7.19E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04880 ed7a025fc99012cfcef5ff8753d47061 375 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 348 1.7E-157 T 14-10-2018 IPR016040 NAD(P)-binding domain AMBLS11_04880 ed7a025fc99012cfcef5ff8753d47061 375 Gene3D G3DSA:3.40.50.720 7 339 1.7E-163 T 14-10-2018 AMBLS11_04880 ed7a025fc99012cfcef5ff8753d47061 375 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 5 354 1.8E-174 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 AMBLS11_04880 ed7a025fc99012cfcef5ff8753d47061 375 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 5 358 54.887 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 AMBLS11_17095 b8a079356033e03fc2250eb496777589 440 Gene3D G3DSA:3.40.190.10 210 386 5.3E-13 T 14-10-2018 AMBLS11_17095 b8a079356033e03fc2250eb496777589 440 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 210 387 9.2E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_17095 b8a079356033e03fc2250eb496777589 440 Gene3D G3DSA:3.40.190.10 282 376 5.3E-13 T 14-10-2018 AMBLS11_17095 b8a079356033e03fc2250eb496777589 440 SUPERFAMILY SSF53850 207 415 1.19E-18 T 14-10-2018 AMBLS11_14505 f4d5368fd7397c08326de6c517a64be0 198 Pfam PF13580 SIS domain 9 144 2.7E-34 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMBLS11_14505 f4d5368fd7397c08326de6c517a64be0 198 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 32 187 3.9E-63 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AMBLS11_14505 f4d5368fd7397c08326de6c517a64be0 198 SUPERFAMILY SSF53697 1 189 1.67E-56 T 14-10-2018 AMBLS11_14505 f4d5368fd7397c08326de6c517a64be0 198 Gene3D G3DSA:3.40.50.10490 1 195 3.4E-76 T 14-10-2018 AMBLS11_14505 f4d5368fd7397c08326de6c517a64be0 198 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 36.847 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AMBLS11_07815 cb1026d2ffe6199d6145d23a8f10560f 271 SUPERFAMILY SSF55486 33 137 4.74E-5 T 14-10-2018 AMBLS11_07815 cb1026d2ffe6199d6145d23a8f10560f 271 SUPERFAMILY SSF55486 94 231 1.06E-20 T 14-10-2018 AMBLS11_07815 cb1026d2ffe6199d6145d23a8f10560f 271 Pfam PF01457 Leishmanolysin 104 233 1.9E-5 T 14-10-2018 IPR001577 Peptidase M8, leishmanolysin GO:0004222|GO:0006508|GO:0007155|GO:0016020 AMBLS11_08955 b4dd34aafce22621366bcd40f6ca561d 169 Gene3D G3DSA:3.40.1280.10 9 151 6.1E-18 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMBLS11_08955 b4dd34aafce22621366bcd40f6ca561d 169 Pfam PF00588 SpoU rRNA Methylase family 8 141 1.3E-17 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMBLS11_08955 b4dd34aafce22621366bcd40f6ca561d 169 SUPERFAMILY SSF75217 4 145 9.94E-27 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 75 7.7E-6 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 466 5.5E-166 T 14-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 Gene3D G3DSA:3.30.390.50 365 468 1.4E-22 T 14-10-2018 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 Pfam PF01799 [2Fe-2S] binding domain 86 156 3.2E-31 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 194 357 3.8E-48 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 SUPERFAMILY SSF54292 2 89 2.75E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 366 466 1.0E-22 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 Gene3D G3DSA:3.10.20.30 1 88 2.3E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 Gene3D G3DSA:3.30.465.10 194 358 1.6E-51 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 SMART SM01092 365 467 5.6E-22 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 SUPERFAMILY SSF47741 94 188 2.75E-35 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 Gene3D G3DSA:1.10.150.120 89 192 5.3E-34 T 14-10-2018 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 PIRSF PIRSF036557 1 480 3.6E-166 T 14-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 SUPERFAMILY SSF56176 193 357 1.45E-48 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMBLS11_07170 605cc3617f88261575b28e0079fb4d8d 481 SUPERFAMILY SSF55447 362 468 3.01E-24 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMBLS11_13470 26bf5632bfcb76ad00a57b2b72b00f7e 182 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AMBLS11_13470 26bf5632bfcb76ad00a57b2b72b00f7e 182 SUPERFAMILY SSF54593 22 168 1.88E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_13470 26bf5632bfcb76ad00a57b2b72b00f7e 182 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 166 1.3E-20 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMBLS11_13470 26bf5632bfcb76ad00a57b2b72b00f7e 182 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 9 174 5.5E-50 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AMBLS11_13470 26bf5632bfcb76ad00a57b2b72b00f7e 182 Gene3D G3DSA:3.10.180.10 2 174 6.0E-61 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_03425 479745fb9244cf3c1c400ec28e6113cc 316 Gene3D G3DSA:1.10.287.1080 164 314 4.6E-47 T 14-10-2018 AMBLS11_03425 479745fb9244cf3c1c400ec28e6113cc 316 SUPERFAMILY SSF101386 12 109 1.13E-24 T 14-10-2018 AMBLS11_03425 479745fb9244cf3c1c400ec28e6113cc 316 Gene3D G3DSA:1.10.287.1080 7 150 3.7E-46 T 14-10-2018 AMBLS11_03425 479745fb9244cf3c1c400ec28e6113cc 316 SUPERFAMILY SSF101386 170 289 4.49E-22 T 14-10-2018 AMBLS11_03425 479745fb9244cf3c1c400ec28e6113cc 316 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 35 108 1.6E-28 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMBLS11_03425 479745fb9244cf3c1c400ec28e6113cc 316 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 204 281 1.1E-5 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMBLS11_03425 479745fb9244cf3c1c400ec28e6113cc 316 TIGRFAM TIGR00444 mazG: MazG family protein 18 310 4.3E-89 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG AMBLS11_13285 26c770e9f14a11c0d363df44235b6604 192 PIRSF PIRSF035805 1 190 2.3E-56 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMBLS11_13285 26c770e9f14a11c0d363df44235b6604 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.418 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMBLS11_13285 26c770e9f14a11c0d363df44235b6604 192 Gene3D G3DSA:3.30.60.20 144 189 6.6E-11 T 14-10-2018 AMBLS11_13285 26c770e9f14a11c0d363df44235b6604 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMBLS11_13285 26c770e9f14a11c0d363df44235b6604 192 SUPERFAMILY SSF52540 1 141 6.38E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13285 26c770e9f14a11c0d363df44235b6604 192 SUPERFAMILY SSF57716 142 191 2.61E-17 T 14-10-2018 AMBLS11_13285 26c770e9f14a11c0d363df44235b6604 192 Gene3D G3DSA:3.40.50.300 1 141 6.1E-26 T 14-10-2018 AMBLS11_13285 26c770e9f14a11c0d363df44235b6604 192 Pfam PF00265 Thymidine kinase 2 186 2.8E-58 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMBLS11_00685 bc87aa3e7cf645adb8b6174c30c4f382 246 SUPERFAMILY SSF52833 3 77 2.34E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_00685 bc87aa3e7cf645adb8b6174c30c4f382 246 Gene3D G3DSA:3.40.30.10 10 78 7.2E-12 T 14-10-2018 AMBLS11_00685 bc87aa3e7cf645adb8b6174c30c4f382 246 Pfam PF00462 Glutaredoxin 14 67 1.7E-6 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMBLS11_17565 9ccb6b20d64475967b18b62422201c13 201 Pfam PF11845 Protein of unknown function (DUF3365) 19 198 1.4E-26 T 14-10-2018 IPR021796 Protein of unknown function DUF3365 AMBLS11_08510 52661a5bdaf3992d5e87f7b684dd0d2f 294 Pfam PF06271 RDD family 193 285 2.8E-16 T 14-10-2018 IPR010432 RDD AMBLS11_09985 a40fceb973f57f152b7cace2cd5f0241 117 SUPERFAMILY SSF52833 5 117 6.72E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_09985 a40fceb973f57f152b7cace2cd5f0241 117 Pfam PF03960 ArsC family 11 116 5.5E-17 T 14-10-2018 IPR006660 Arsenate reductase-like AMBLS11_09985 a40fceb973f57f152b7cace2cd5f0241 117 Gene3D G3DSA:3.40.30.10 1 117 2.1E-47 T 14-10-2018 AMBLS11_09985 a40fceb973f57f152b7cace2cd5f0241 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 2.8E-46 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AMBLS11_07240 e032c6ea5b0dfdd4ba9a596b552884fe 121 Pfam PF05899 Protein of unknown function (DUF861) 52 91 2.9E-5 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AMBLS11_07240 e032c6ea5b0dfdd4ba9a596b552884fe 121 SUPERFAMILY SSF51182 19 105 2.61E-8 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_07240 e032c6ea5b0dfdd4ba9a596b552884fe 121 Gene3D G3DSA:2.60.120.10 30 102 1.5E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_07475 183ed55ffdb448d12d81514c8ca30662 611 SUPERFAMILY SSF52266 413 607 3.66E-5 T 14-10-2018 AMBLS11_07475 183ed55ffdb448d12d81514c8ca30662 611 Pfam PF01757 Acyltransferase family 7 309 2.6E-22 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMBLS11_13355 663e7aad36fb37857212aff10421d3c3 218 Gene3D G3DSA:3.90.226.10 2 218 1.8E-58 T 14-10-2018 AMBLS11_13355 663e7aad36fb37857212aff10421d3c3 218 SUPERFAMILY SSF52096 5 212 3.45E-42 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_13355 663e7aad36fb37857212aff10421d3c3 218 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 211 1.4E-37 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 2.7E-66 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 1.5E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 1.5E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 1.5E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.5E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 1.5E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 47.911 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 Gene3D G3DSA:3.30.420.10 1 158 1.2E-51 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 SUPERFAMILY SSF53098 1 154 1.02E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_06115 e01afe7f5da7c5847bca11f9e983481d 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 3.2E-60 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMBLS11_08755 46cd7e46426ce06893f94537ebbf8b1c 200 SUPERFAMILY SSF88946 22 110 9.42E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_08755 46cd7e46426ce06893f94537ebbf8b1c 200 SUPERFAMILY SSF88659 137 198 2.62E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMBLS11_08755 46cd7e46426ce06893f94537ebbf8b1c 200 Gene3D G3DSA:1.10.10.10 136 200 2.2E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_08755 46cd7e46426ce06893f94537ebbf8b1c 200 Pfam PF04542 Sigma-70 region 2 53 106 7.6E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMBLS11_08755 46cd7e46426ce06893f94537ebbf8b1c 200 Pfam PF08281 Sigma-70, region 4 143 190 4.9E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMBLS11_08755 46cd7e46426ce06893f94537ebbf8b1c 200 Gene3D G3DSA:1.10.1740.10 20 103 1.2E-17 T 14-10-2018 AMBLS11_08755 46cd7e46426ce06893f94537ebbf8b1c 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 197 2.5E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.889 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 5.9E-58 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.5E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.5E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.5E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.5E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.5E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 SUPERFAMILY SSF54919 1 140 1.96E-60 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 Gene3D G3DSA:3.30.70.141 1 143 2.5E-59 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_12880 fc4729d4247d830ebd2baf87ed4d8a98 143 SMART SM00562 3 140 1.3E-88 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMBLS11_17470 e724579efd599e7a743c9193b4b22c2d 360 Gene3D G3DSA:1.10.287.950 58 262 9.5E-44 T 14-10-2018 AMBLS11_17470 e724579efd599e7a743c9193b4b22c2d 360 SUPERFAMILY SSF58104 51 266 1.83E-45 T 14-10-2018 AMBLS11_17470 e724579efd599e7a743c9193b4b22c2d 360 Pfam PF13682 Chemoreceptor zinc-binding domain 260 326 6.4E-13 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain AMBLS11_17470 e724579efd599e7a743c9193b4b22c2d 360 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 117 250 2.9E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_17470 e724579efd599e7a743c9193b4b22c2d 360 SMART SM00283 35 266 4.4E-17 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_17470 e724579efd599e7a743c9193b4b22c2d 360 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 141 168 5.7E-17 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_17470 e724579efd599e7a743c9193b4b22c2d 360 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 170 199 5.7E-17 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_18265 a6cadb2e1f6687584cb998848c1cfd70 348 Gene3D G3DSA:1.10.40.60 241 306 4.1E-80 T 14-10-2018 IPR038072 GspK, central domain superfamily AMBLS11_18265 a6cadb2e1f6687584cb998848c1cfd70 348 SUPERFAMILY SSF54523 48 346 8.63E-28 T 14-10-2018 AMBLS11_18265 a6cadb2e1f6687584cb998848c1cfd70 348 SUPERFAMILY SSF158544 113 236 3.92E-27 T 14-10-2018 IPR038072 GspK, central domain superfamily AMBLS11_18265 a6cadb2e1f6687584cb998848c1cfd70 348 SUPERFAMILY SSF158544 240 306 4.18E-16 T 14-10-2018 IPR038072 GspK, central domain superfamily AMBLS11_18265 a6cadb2e1f6687584cb998848c1cfd70 348 PIRSF PIRSF002786 12 347 1.4E-67 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AMBLS11_18265 a6cadb2e1f6687584cb998848c1cfd70 348 Gene3D G3DSA:1.10.40.60 111 240 4.1E-80 T 14-10-2018 IPR038072 GspK, central domain superfamily AMBLS11_18265 a6cadb2e1f6687584cb998848c1cfd70 348 Gene3D G3DSA:3.30.1300.30 54 329 4.1E-80 T 14-10-2018 AMBLS11_18265 a6cadb2e1f6687584cb998848c1cfd70 348 Pfam PF03934 Type II secretion system (T2SS), protein K 42 335 3.3E-82 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AMBLS11_15705 0f33252d418a2a500f06da8c25853651 609 SUPERFAMILY SSF56300 103 502 9.48E-10 T 14-10-2018 AMBLS11_17245 25dad0de4ab361c7254a9d3a67425926 477 SUPERFAMILY SSF53720 7 472 7.2E-138 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_17245 25dad0de4ab361c7254a9d3a67425926 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMBLS11_17245 25dad0de4ab361c7254a9d3a67425926 477 Pfam PF00171 Aldehyde dehydrogenase family 19 468 1.4E-144 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMBLS11_17245 25dad0de4ab361c7254a9d3a67425926 477 Gene3D G3DSA:3.40.309.10 252 440 1.2E-157 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMBLS11_17245 25dad0de4ab361c7254a9d3a67425926 477 Gene3D G3DSA:3.40.605.10 27 461 1.2E-157 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_14715 8faa495bef9c3a9281aadeac1cdaf441 439 Gene3D G3DSA:2.40.160.180 35 433 5.5E-103 T 14-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily AMBLS11_14715 8faa495bef9c3a9281aadeac1cdaf441 439 Pfam PF04966 Carbohydrate-selective porin, OprB family 63 432 4.4E-77 T 14-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 AMBLS11_11865 a1bc2f0f8a1a06765e49578c327df195 270 Gene3D G3DSA:3.20.20.70 1 266 5.6E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_11865 a1bc2f0f8a1a06765e49578c327df195 270 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 42.747 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AMBLS11_11865 a1bc2f0f8a1a06765e49578c327df195 270 SUPERFAMILY SSF51366 1 256 1.26E-68 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMBLS11_11865 a1bc2f0f8a1a06765e49578c327df195 270 Pfam PF00977 Histidine biosynthesis protein 5 239 2.4E-75 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AMBLS11_11865 a1bc2f0f8a1a06765e49578c327df195 270 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 9.4E-107 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AMBLS11_05800 a4fd49f897f68fa2f5d45ddde2150e19 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 6.0E-60 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMBLS11_05800 a4fd49f897f68fa2f5d45ddde2150e19 304 PIRSF PIRSF002936 2 304 4.4E-153 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMBLS11_05800 a4fd49f897f68fa2f5d45ddde2150e19 304 SUPERFAMILY SSF52402 8 211 1.75E-69 T 14-10-2018 AMBLS11_05800 a4fd49f897f68fa2f5d45ddde2150e19 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 6.8E-156 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMBLS11_05800 a4fd49f897f68fa2f5d45ddde2150e19 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 56.623 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMBLS11_05800 a4fd49f897f68fa2f5d45ddde2150e19 304 Gene3D G3DSA:3.40.50.620 9 213 6.7E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_14080 8cbf31d75cf050706e9264438263a035 313 Gene3D G3DSA:1.10.150.170 115 217 3.5E-107 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AMBLS11_14080 8cbf31d75cf050706e9264438263a035 313 Gene3D G3DSA:3.40.50.150 12 312 3.5E-107 T 14-10-2018 AMBLS11_14080 8cbf31d75cf050706e9264438263a035 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 313 38.648 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMBLS11_14080 8cbf31d75cf050706e9264438263a035 313 SUPERFAMILY SSF53335 9 313 1.51E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_14080 8cbf31d75cf050706e9264438263a035 313 SUPERFAMILY SSF81799 117 216 1.31E-34 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AMBLS11_14080 8cbf31d75cf050706e9264438263a035 313 Pfam PF01795 MraW methylase family 6 312 4.8E-117 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMBLS11_14080 8cbf31d75cf050706e9264438263a035 313 PIRSF PIRSF004486 3 313 2.5E-106 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMBLS11_14080 8cbf31d75cf050706e9264438263a035 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 312 6.4E-125 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMBLS11_14645 d1dce977836501564da90dd57ce2ed1d 307 SUPERFAMILY SSF53807 62 303 3.57E-45 T 14-10-2018 AMBLS11_14645 d1dce977836501564da90dd57ce2ed1d 307 Gene3D G3DSA:3.40.50.1980 180 305 2.2E-19 T 14-10-2018 AMBLS11_14645 d1dce977836501564da90dd57ce2ed1d 307 Pfam PF01497 Periplasmic binding protein 63 256 9.6E-19 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMBLS11_14645 d1dce977836501564da90dd57ce2ed1d 307 Gene3D G3DSA:3.40.50.1980 59 177 5.1E-31 T 14-10-2018 AMBLS11_00800 8f9da40b8c6929cc61083cc7ee38f76b 78 Pfam PF13627 Prokaryotic lipoprotein-attachment site 19 40 5.5E-7 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site AMBLS11_04610 de6d8ca67783d356529f27fea45c5d8a 256 SUPERFAMILY SSF51161 2 256 1.36E-79 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_04610 de6d8ca67783d356529f27fea45c5d8a 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 2.4E-102 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AMBLS11_04610 de6d8ca67783d356529f27fea45c5d8a 256 PIRSF PIRSF000456 1 256 7.7E-104 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AMBLS11_04610 de6d8ca67783d356529f27fea45c5d8a 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 2.8E-28 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 AMBLS11_04610 de6d8ca67783d356529f27fea45c5d8a 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 46 8.0E-11 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_04610 de6d8ca67783d356529f27fea45c5d8a 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 1.9E-6 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_04610 de6d8ca67783d356529f27fea45c5d8a 256 Gene3D G3DSA:2.160.10.10 1 186 7.4E-54 T 14-10-2018 AMBLS11_04610 de6d8ca67783d356529f27fea45c5d8a 256 Gene3D G3DSA:1.20.1180.10 191 256 1.1E-25 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 AMBLS11_04610 de6d8ca67783d356529f27fea45c5d8a 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 43.386 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AMBLS11_10560 8f0e28f91f428242082f1e28e4b95785 453 Pfam PF01966 HD domain 69 151 1.1E-8 T 14-10-2018 IPR006674 HD domain AMBLS11_10560 8f0e28f91f428242082f1e28e4b95785 453 Pfam PF13286 Phosphohydrolase-associated domain 347 437 1.5E-26 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain AMBLS11_10560 8f0e28f91f428242082f1e28e4b95785 453 Gene3D G3DSA:1.10.3210.10 7 441 1.0E-97 T 14-10-2018 AMBLS11_10560 8f0e28f91f428242082f1e28e4b95785 453 SUPERFAMILY SSF109604 30 443 3.3E-79 T 14-10-2018 AMBLS11_10560 8f0e28f91f428242082f1e28e4b95785 453 SMART SM00471 65 270 3.4E-8 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_10560 8f0e28f91f428242082f1e28e4b95785 453 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 441 1.1E-115 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AMBLS11_10560 8f0e28f91f428242082f1e28e4b95785 453 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 6 440 33.683 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 AMBLS11_14445 b9de3db2d3983aae8299f760159eba22 270 Pfam PF04116 Fatty acid hydroxylase superfamily 79 212 7.4E-30 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AMBLS11_08415 f196e6e112387e98250f1dd2cdb103fd 204 Pfam PF07681 DoxX 20 104 3.3E-20 T 14-10-2018 IPR032808 DoxX family AMBLS11_17445 65432b2073f721ba4cb76e2cb652abe1 95 Gene3D G3DSA:1.10.10.710 21 89 5.2E-12 T 14-10-2018 IPR038627 YebG-like superfamily AMBLS11_17445 65432b2073f721ba4cb76e2cb652abe1 95 Pfam PF07130 YebG protein 1 74 2.3E-28 T 14-10-2018 IPR009813 Uncharacterised protein family YebG AMBLS11_03180 15971f716c458197cadf1e2c49eba1d2 278 Gene3D G3DSA:1.10.3210.10 1 278 1.9E-57 T 14-10-2018 AMBLS11_03180 15971f716c458197cadf1e2c49eba1d2 278 SUPERFAMILY SSF109604 11 261 5.1E-49 T 14-10-2018 AMBLS11_03180 15971f716c458197cadf1e2c49eba1d2 278 Pfam PF08668 HDOD domain 22 211 2.4E-35 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMBLS11_11900 2a49cd90e148817d3a4d64e30333ed70 864 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 171 1.7E-23 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_11900 2a49cd90e148817d3a4d64e30333ed70 864 Gene3D G3DSA:2.170.130.10 33 175 1.9E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_11900 2a49cd90e148817d3a4d64e30333ed70 864 Pfam PF00593 TonB dependent receptor 337 863 3.6E-51 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_11900 2a49cd90e148817d3a4d64e30333ed70 864 SUPERFAMILY SSF56935 30 864 3.36E-109 T 14-10-2018 AMBLS11_11900 2a49cd90e148817d3a4d64e30333ed70 864 Gene3D G3DSA:2.40.170.20 294 864 9.2E-65 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_05945 4e3e833c61ec1e39298bf3f2a1f46207 352 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 342 1.7E-61 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_05945 4e3e833c61ec1e39298bf3f2a1f46207 352 Gene3D G3DSA:2.40.420.20 274 341 2.3E-63 T 14-10-2018 AMBLS11_05945 4e3e833c61ec1e39298bf3f2a1f46207 352 SUPERFAMILY SSF111369 51 268 9.55E-36 T 14-10-2018 AMBLS11_05945 4e3e833c61ec1e39298bf3f2a1f46207 352 Gene3D G3DSA:2.40.30.170 51 273 2.3E-63 T 14-10-2018 AMBLS11_05945 4e3e833c61ec1e39298bf3f2a1f46207 352 Gene3D G3DSA:2.40.50.100 63 191 2.3E-63 T 14-10-2018 AMBLS11_05945 4e3e833c61ec1e39298bf3f2a1f46207 352 Gene3D G3DSA:1.10.287.470 98 157 2.3E-63 T 14-10-2018 AMBLS11_05945 4e3e833c61ec1e39298bf3f2a1f46207 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 262 3.3E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_00845 9c7d0972a5ef4a3d900e91458401db95 176 Gene3D G3DSA:3.90.80.10 1 175 6.2E-72 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMBLS11_00845 9c7d0972a5ef4a3d900e91458401db95 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMBLS11_00845 9c7d0972a5ef4a3d900e91458401db95 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.823 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMBLS11_00845 9c7d0972a5ef4a3d900e91458401db95 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.2E-54 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMBLS11_00845 9c7d0972a5ef4a3d900e91458401db95 176 SUPERFAMILY SSF50324 4 173 1.11E-66 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMBLS11_06635 c5d2d236235eea84720b84ba5a0fc635 484 Gene3D G3DSA:3.40.50.1820 126 463 2.4E-107 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_06635 c5d2d236235eea84720b84ba5a0fc635 484 PIRSF PIRSF000443 76 484 1.0E-102 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AMBLS11_06635 c5d2d236235eea84720b84ba5a0fc635 484 Pfam PF00561 alpha/beta hydrolase fold 218 426 3.7E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_06635 c5d2d236235eea84720b84ba5a0fc635 484 Gene3D G3DSA:1.10.1740.110 290 397 2.4E-107 T 14-10-2018 AMBLS11_06635 c5d2d236235eea84720b84ba5a0fc635 484 SUPERFAMILY SSF53474 110 477 1.0E-70 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_06635 c5d2d236235eea84720b84ba5a0fc635 484 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 108 477 21.283 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 SUPERFAMILY SSF51735 8 236 5.38E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 Pfam PF00106 short chain dehydrogenase 12 204 1.1E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 4.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 4.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 4.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 4.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 4.8E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 Gene3D G3DSA:3.40.50.720 6 250 6.6E-66 T 14-10-2018 AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_09150 644e7fe072060877e1bb40c2cff54595 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 196 2.3E-6 T 14-10-2018 AMBLS11_05580 08beadd80bdfd491c3ffeee34190952f 216 Pfam PF01713 Smr domain 133 207 2.0E-17 T 14-10-2018 IPR002625 Smr domain AMBLS11_05580 08beadd80bdfd491c3ffeee34190952f 216 SMART SM00463 130 208 4.7E-13 T 14-10-2018 IPR002625 Smr domain AMBLS11_05580 08beadd80bdfd491c3ffeee34190952f 216 Gene3D G3DSA:3.30.1370.110 85 210 1.3E-26 T 14-10-2018 AMBLS11_05580 08beadd80bdfd491c3ffeee34190952f 216 SUPERFAMILY SSF160443 130 205 4.45E-10 T 14-10-2018 IPR036063 Smr domain superfamily AMBLS11_04390 af772a9601ca3028171b7677c82977de 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 336 4.1E-142 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AMBLS11_04390 af772a9601ca3028171b7677c82977de 340 Gene3D G3DSA:3.90.25.10 195 330 1.3E-146 T 14-10-2018 AMBLS11_04390 af772a9601ca3028171b7677c82977de 340 SUPERFAMILY SSF51735 1 336 1.53E-100 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04390 af772a9601ca3028171b7677c82977de 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 326 9.3E-62 T 14-10-2018 IPR016040 NAD(P)-binding domain AMBLS11_04390 af772a9601ca3028171b7677c82977de 340 Gene3D G3DSA:3.40.50.720 4 275 1.3E-146 T 14-10-2018 AMBLS11_08855 1c1e38f7b1f1e806259503a2731f7618 258 Gene3D G3DSA:3.40.50.720 2 258 8.6E-101 T 14-10-2018 AMBLS11_08855 1c1e38f7b1f1e806259503a2731f7618 258 Pfam PF00899 ThiF family 15 256 1.3E-37 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMBLS11_08855 1c1e38f7b1f1e806259503a2731f7618 258 SUPERFAMILY SSF69572 4 257 1.83E-64 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMBLS11_10580 011ddadb7fd4afe11827fc95388f8e96 132 Pfam PF09335 SNARE associated Golgi protein 19 130 1.1E-12 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 Gene3D G3DSA:1.20.59.20 245 327 1.9E-14 T 14-10-2018 AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 SUPERFAMILY SSF82829 246 326 1.14E-15 T 14-10-2018 AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 31 213 2.4E-53 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 Pfam PF01171 PP-loop family 31 210 4.1E-53 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 SUPERFAMILY SSF56037 339 419 3.14E-9 T 14-10-2018 AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 Pfam PF09179 TilS substrate binding domain 262 324 3.5E-14 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 13 320 22.838 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 SUPERFAMILY SSF52402 30 240 3.46E-57 T 14-10-2018 AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 Gene3D G3DSA:3.40.50.620 23 242 7.8E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_04635 9919db45623792f99dc6eca7be04eace 441 Pfam PF11734 TilS substrate C-terminal domain 367 418 6.3E-9 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 Gene3D G3DSA:1.20.1580.10 692 830 1.1E-142 T 14-10-2018 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 Gene3D G3DSA:1.10.8.280 287 403 2.1E-246 T 14-10-2018 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 Pfam PF00005 ABC transporter 623 860 1.0E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 Gene3D G3DSA:3.40.50.300 617 936 1.1E-142 T 14-10-2018 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.858 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 Gene3D G3DSA:1.20.1580.10 90 492 2.1E-246 T 14-10-2018 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 Gene3D G3DSA:3.40.50.300 6 595 2.1E-246 T 14-10-2018 AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 SUPERFAMILY SSF52540 621 911 2.22E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 SUPERFAMILY SSF52540 3 569 8.98E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00890 8fc0fbbda114c7677ddab95a2086d5ef 943 Gene3D G3DSA:3.30.190.20 130 239 2.1E-246 T 14-10-2018 AMBLS11_07745 c024976fbdeeac3481d83443d71f31d6 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 170 340 8.8E-27 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AMBLS11_07745 c024976fbdeeac3481d83443d71f31d6 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 395 69.265 T 14-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 AMBLS11_07745 c024976fbdeeac3481d83443d71f31d6 397 SUPERFAMILY SSF53335 79 391 5.57E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_07745 c024976fbdeeac3481d83443d71f31d6 397 Gene3D G3DSA:2.30.130.10 1 72 2.1E-29 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMBLS11_07745 c024976fbdeeac3481d83443d71f31d6 397 Gene3D G3DSA:3.30.750.80 73 180 7.1E-35 T 14-10-2018 AMBLS11_07745 c024976fbdeeac3481d83443d71f31d6 397 SMART SM00359 3 88 8.7E-12 T 14-10-2018 IPR002478 PUA domain GO:0003723 AMBLS11_07745 c024976fbdeeac3481d83443d71f31d6 397 SUPERFAMILY SSF88697 4 72 1.21E-16 T 14-10-2018 IPR015947 PUA-like superfamily AMBLS11_07745 c024976fbdeeac3481d83443d71f31d6 397 Gene3D G3DSA:3.40.50.150 181 395 6.6E-68 T 14-10-2018 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 9.9E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 9.9E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 9.9E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 9.9E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 SUPERFAMILY SSF53671 2 317 3.14E-87 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 9.2E-47 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 314 4.2E-23 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 7 315 3.1E-93 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 5.9E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 5.9E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 5.9E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 5.9E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 5.9E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 Gene3D G3DSA:3.40.50.1370 8 312 8.0E-103 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMBLS11_01895 b61f1623ea2d3200ee94ae3236ce605d 337 Gene3D G3DSA:3.40.50.1370 136 303 8.0E-103 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMBLS11_04685 33e0ea0a04511477feaf89e239d9f35c 393 Gene3D G3DSA:3.40.50.10610 124 307 8.1E-45 T 14-10-2018 AMBLS11_04685 33e0ea0a04511477feaf89e239d9f35c 393 Pfam PF16539 Flagellar assembly protein T, middle domain 125 272 7.5E-35 T 14-10-2018 IPR032386 Flagellar assembly protein T, middle domain AMBLS11_04685 33e0ea0a04511477feaf89e239d9f35c 393 Gene3D G3DSA:3.30.1660.40 33 123 4.8E-29 T 14-10-2018 IPR038180 FlgT, N-terminal domain superfamily AMBLS11_04685 33e0ea0a04511477feaf89e239d9f35c 393 Gene3D G3DSA:2.40.10.410 308 393 2.0E-10 T 14-10-2018 IPR038165 FlgT, C-terminal domain superfamily AMBLS11_04685 33e0ea0a04511477feaf89e239d9f35c 393 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 34 120 5.0E-26 T 14-10-2018 IPR032370 Flagellar assembly protein T, N-terminal AMBLS11_04685 33e0ea0a04511477feaf89e239d9f35c 393 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 316 392 7.9E-12 T 14-10-2018 IPR032388 Flagellar assembly protein T, C-terminal AMBLS11_15695 07dbb5c43564f499c93710770ad3c88a 181 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 163 37.925 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMBLS11_15695 07dbb5c43564f499c93710770ad3c88a 181 Gene3D G3DSA:3.30.1060.10 1 168 3.2E-72 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMBLS11_15695 07dbb5c43564f499c93710770ad3c88a 181 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 158 1.2E-62 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMBLS11_15695 07dbb5c43564f499c93710770ad3c88a 181 SUPERFAMILY SSF55068 2 169 7.46E-75 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMBLS11_15695 07dbb5c43564f499c93710770ad3c88a 181 Pfam PF01625 Peptide methionine sulfoxide reductase 7 159 1.7E-66 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMBLS11_00400 65860d7428d4e1191987ad34d9d80fb2 1045 Pfam PF00271 Helicase conserved C-terminal domain 820 865 7.2E-8 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_00400 65860d7428d4e1191987ad34d9d80fb2 1045 Gene3D G3DSA:3.40.50.300 783 894 6.6E-11 T 14-10-2018 AMBLS11_00400 65860d7428d4e1191987ad34d9d80fb2 1045 SMART SM00490 783 866 0.0014 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_00400 65860d7428d4e1191987ad34d9d80fb2 1045 SUPERFAMILY SSF52540 418 880 5.24E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14895 2d13ea34ffd5ad3c8d12a700317b17c5 282 SUPERFAMILY SSF117892 88 217 8.11E-13 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily AMBLS11_14895 2d13ea34ffd5ad3c8d12a700317b17c5 282 Pfam PF01145 SPFH domain / Band 7 family 53 225 5.7E-24 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_14895 2d13ea34ffd5ad3c8d12a700317b17c5 282 Gene3D G3DSA:3.30.479.30 83 217 1.4E-8 T 14-10-2018 AMBLS11_14895 2d13ea34ffd5ad3c8d12a700317b17c5 282 SMART SM00244 49 215 3.4E-11 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_15550 c975578f97a24f1b531b072d43a4373f 188 SMART SM00986 27 179 5.8E-23 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_15550 c975578f97a24f1b531b072d43a4373f 188 SMART SM00987 27 179 5.8E-23 T 14-10-2018 AMBLS11_15550 c975578f97a24f1b531b072d43a4373f 188 Gene3D G3DSA:3.40.470.10 3 188 1.3E-57 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_15550 c975578f97a24f1b531b072d43a4373f 188 SUPERFAMILY SSF52141 6 185 6.21E-46 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_15550 c975578f97a24f1b531b072d43a4373f 188 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 5.5E-23 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 Gene3D G3DSA:3.30.565.10 558 721 6.6E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 Pfam PF00512 His Kinase A (phospho-acceptor) domain 500 562 4.9E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 SUPERFAMILY SSF49344 78 253 7.85E-9 T 14-10-2018 AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 613 720 1.3E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 TIGRFAM TIGR03785 marine_sort_HK: proteobacterial dedicated sortase system histidine kinase 7 719 6.8E-279 T 14-10-2018 IPR022510 Sortase system, histidine kinase AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 SMART SM00388 498 563 3.4E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 SUPERFAMILY SSF55874 553 721 3.41E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 SMART SM00387 607 721 2.1E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 Gene3D G3DSA:1.10.287.130 440 556 7.9E-17 T 14-10-2018 AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 SUPERFAMILY SSF47384 482 561 8.04E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_16880 7503bf47478284bc3290568b54967bec 722 Gene3D G3DSA:2.60.40.1190 83 270 1.5E-10 T 14-10-2018 AMBLS11_05295 74f011cda78d053dd8039b59338834d7 354 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 236 337 6.7E-14 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMBLS11_05295 74f011cda78d053dd8039b59338834d7 354 Gene3D G3DSA:2.60.120.620 150 337 9.5E-45 T 14-10-2018 AMBLS11_05295 74f011cda78d053dd8039b59338834d7 354 SMART SM00702 154 337 1.3E-31 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMBLS11_15510 a9af5080b09a3dc11d8badd283f9f8f8 579 SUPERFAMILY SSF56801 28 569 1.18E-153 T 14-10-2018 AMBLS11_15510 a9af5080b09a3dc11d8badd283f9f8f8 579 ProSitePatterns PS00455 Putative AMP-binding domain signature. 222 233 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMBLS11_15510 a9af5080b09a3dc11d8badd283f9f8f8 579 Gene3D G3DSA:3.40.50.12780 24 465 1.5E-119 T 14-10-2018 AMBLS11_15510 a9af5080b09a3dc11d8badd283f9f8f8 579 Gene3D G3DSA:3.30.300.30 466 570 6.3E-31 T 14-10-2018 AMBLS11_15510 a9af5080b09a3dc11d8badd283f9f8f8 579 Pfam PF13193 AMP-binding enzyme C-terminal domain 481 556 5.1E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMBLS11_15510 a9af5080b09a3dc11d8badd283f9f8f8 579 Pfam PF00501 AMP-binding enzyme 36 472 2.3E-109 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMBLS11_07235 a5c87747a66367eebe086b9364a34d39 492 SUPERFAMILY SSF51556 41 440 3.36E-63 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_07235 a5c87747a66367eebe086b9364a34d39 492 Pfam PF00962 Adenosine/AMP deaminase 178 430 7.6E-35 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AMBLS11_13160 1757deaae48c4d75c7f8138e94489bf0 313 SUPERFAMILY SSF52540 4 221 1.76E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13160 1757deaae48c4d75c7f8138e94489bf0 313 Gene3D G3DSA:3.40.50.300 1 262 1.5E-10 T 14-10-2018 AMBLS11_14215 a7e3fab088d4f3974a2f21568e658faf 347 Gene3D G3DSA:3.30.450.90 1 100 1.6E-34 T 14-10-2018 AMBLS11_14215 a7e3fab088d4f3974a2f21568e658faf 347 SUPERFAMILY SSF52540 5 334 4.64E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14215 a7e3fab088d4f3974a2f21568e658faf 347 Gene3D G3DSA:3.40.50.300 101 347 1.0E-105 T 14-10-2018 AMBLS11_14215 a7e3fab088d4f3974a2f21568e658faf 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 1.4E-153 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AMBLS11_14215 a7e3fab088d4f3974a2f21568e658faf 347 Pfam PF00437 Type II/IV secretion system protein 12 269 2.0E-50 T 14-10-2018 IPR001482 Type II/IV secretion system protein AMBLS11_14215 a7e3fab088d4f3974a2f21568e658faf 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 Pfam PF00347 Ribosomal protein L6 13 82 2.8E-16 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 Pfam PF00347 Ribosomal protein L6 91 164 1.0E-21 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 6.7E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 6.7E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 6.7E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 Gene3D G3DSA:3.90.930.12 83 177 1.5E-41 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.202 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 PIRSF PIRSF002162 1 177 1.1E-42 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 Gene3D G3DSA:3.90.930.12 1 82 5.3E-26 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.2E-74 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 SUPERFAMILY SSF56053 83 177 6.94E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_16390 7ef358962ffb0608e5026cd0eaa6b902 177 SUPERFAMILY SSF56053 1 82 1.76E-20 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_09040 33543d004eee4115c991257af10c1002 247 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 247 35.855 T 14-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AMBLS11_09040 33543d004eee4115c991257af10c1002 247 Gene3D G3DSA:3.40.50.150 9 247 2.6E-49 T 14-10-2018 AMBLS11_09040 33543d004eee4115c991257af10c1002 247 Pfam PF08242 Methyltransferase domain 47 137 2.1E-11 T 14-10-2018 IPR013217 Methyltransferase type 12 AMBLS11_09040 33543d004eee4115c991257af10c1002 247 SUPERFAMILY SSF53335 3 246 1.75E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_17230 100b5d43f9dacb9a02482e5a2747ed28 306 Gene3D G3DSA:3.40.50.1820 19 306 1.3E-81 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_17230 100b5d43f9dacb9a02482e5a2747ed28 306 SUPERFAMILY SSF53474 22 286 1.64E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_17230 100b5d43f9dacb9a02482e5a2747ed28 306 Pfam PF00561 alpha/beta hydrolase fold 27 134 7.5E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_06250 7b17b1569f4c843c09b2cc7b835388b5 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 146 1.3E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_06250 7b17b1569f4c843c09b2cc7b835388b5 697 Gene3D G3DSA:2.170.130.10 33 156 3.8E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_06250 7b17b1569f4c843c09b2cc7b835388b5 697 SUPERFAMILY SSF56935 17 693 1.88E-114 T 14-10-2018 AMBLS11_06250 7b17b1569f4c843c09b2cc7b835388b5 697 Pfam PF00593 TonB dependent receptor 213 692 7.8E-50 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_06250 7b17b1569f4c843c09b2cc7b835388b5 697 Gene3D G3DSA:2.40.170.20 157 697 4.9E-98 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_06250 7b17b1569f4c843c09b2cc7b835388b5 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 692 3.0E-84 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMBLS11_15095 c2d4978b8164a9834a06a5dfc949ba11 248 Gene3D G3DSA:3.40.30.10 106 248 3.2E-39 T 14-10-2018 AMBLS11_15095 c2d4978b8164a9834a06a5dfc949ba11 248 Gene3D G3DSA:3.10.450.70 22 91 2.3E-24 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AMBLS11_15095 c2d4978b8164a9834a06a5dfc949ba11 248 Pfam PF13098 Thioredoxin-like domain 115 230 3.0E-16 T 14-10-2018 IPR012336 Thioredoxin-like fold AMBLS11_15095 c2d4978b8164a9834a06a5dfc949ba11 248 SUPERFAMILY SSF52833 98 247 2.25E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_15095 c2d4978b8164a9834a06a5dfc949ba11 248 SUPERFAMILY SSF54423 21 79 2.49E-12 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 Gene3D G3DSA:3.30.830.10 47 273 1.6E-68 T 14-10-2018 AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 Pfam PF00675 Insulinase (Peptidase family M16) 63 181 1.1E-18 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 Pfam PF00675 Insulinase (Peptidase family M16) 544 668 2.5E-14 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 Gene3D G3DSA:3.30.830.10 530 737 1.5E-42 T 14-10-2018 AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 Pfam PF05193 Peptidase M16 inactive domain 692 868 5.9E-26 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 Pfam PF05193 Peptidase M16 inactive domain 220 397 6.5E-26 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 SUPERFAMILY SSF63411 279 469 5.74E-35 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 Gene3D G3DSA:3.30.830.10 276 475 8.9E-37 T 14-10-2018 AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 SUPERFAMILY SSF63411 523 728 1.39E-45 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 SUPERFAMILY SSF63411 51 259 3.67E-56 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 SUPERFAMILY SSF63411 748 948 7.33E-37 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_05550 f4f719e0987992a00f1ff5f4d5ab0e5b 965 Gene3D G3DSA:3.30.830.10 746 941 2.0E-32 T 14-10-2018 AMBLS11_01770 b1b981470588b8c6e9c766a1d39ae623 369 Pfam PF00534 Glycosyl transferases group 1 176 335 5.2E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_01770 b1b981470588b8c6e9c766a1d39ae623 369 Gene3D G3DSA:3.40.50.2000 37 356 7.3E-57 T 14-10-2018 AMBLS11_01770 b1b981470588b8c6e9c766a1d39ae623 369 Gene3D G3DSA:3.40.50.2000 160 343 7.3E-57 T 14-10-2018 AMBLS11_01770 b1b981470588b8c6e9c766a1d39ae623 369 Pfam PF13439 Glycosyltransferase Family 4 16 162 1.1E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMBLS11_01770 b1b981470588b8c6e9c766a1d39ae623 369 SUPERFAMILY SSF53756 4 358 9.42E-64 T 14-10-2018 AMBLS11_04180 def9f4ff2c44b78cbe0c63011f219b68 379 Gene3D G3DSA:3.80.30.20 1 294 2.5E-97 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMBLS11_04180 def9f4ff2c44b78cbe0c63011f219b68 379 SMART SM00729 5 221 1.8E-48 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMBLS11_04180 def9f4ff2c44b78cbe0c63011f219b68 379 Pfam PF06969 HemN C-terminal domain 304 368 7.4E-15 T 14-10-2018 IPR010723 HemN, C-terminal AMBLS11_04180 def9f4ff2c44b78cbe0c63011f219b68 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 370 3.9E-129 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 AMBLS11_04180 def9f4ff2c44b78cbe0c63011f219b68 379 SUPERFAMILY SSF102114 2 378 2.49E-111 T 14-10-2018 AMBLS11_04180 def9f4ff2c44b78cbe0c63011f219b68 379 Pfam PF04055 Radical SAM superfamily 10 176 4.8E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_00895 6330a5181765a34fd8936c10bb206b34 445 PRINTS PR01035 Tetracycline resistance protein signature 18 34 5.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMBLS11_00895 6330a5181765a34fd8936c10bb206b34 445 PRINTS PR01035 Tetracycline resistance protein signature 99 120 5.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMBLS11_00895 6330a5181765a34fd8936c10bb206b34 445 PRINTS PR01035 Tetracycline resistance protein signature 270 291 5.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMBLS11_00895 6330a5181765a34fd8936c10bb206b34 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMBLS11_00895 6330a5181765a34fd8936c10bb206b34 445 SUPERFAMILY SSF103473 7 383 1.83E-57 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_00895 6330a5181765a34fd8936c10bb206b34 445 Pfam PF07690 Major Facilitator Superfamily 13 347 1.0E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_00895 6330a5181765a34fd8936c10bb206b34 445 Gene3D G3DSA:1.20.1250.20 3 386 2.1E-72 T 14-10-2018 AMBLS11_04805 46c58beea7206275de1673fc68b3e381 142 Pfam PF02561 Flagellar protein FliS 7 123 1.0E-36 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMBLS11_04805 46c58beea7206275de1673fc68b3e381 142 SUPERFAMILY SSF101116 7 129 7.98E-39 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 AMBLS11_04805 46c58beea7206275de1673fc68b3e381 142 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 123 1.9E-27 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMBLS11_04805 46c58beea7206275de1673fc68b3e381 142 Gene3D G3DSA:1.20.120.340 2 129 7.4E-39 T 14-10-2018 AMBLS11_04805 46c58beea7206275de1673fc68b3e381 142 PIRSF PIRSF039090 1 134 4.8E-50 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMBLS11_13005 ad1fee48e9498781e22f658777c8b263 351 Pfam PF07885 Ion channel 48 102 1.0E-11 T 14-10-2018 IPR013099 Potassium channel domain AMBLS11_13005 ad1fee48e9498781e22f658777c8b263 351 SUPERFAMILY SSF81324 20 133 1.83E-18 T 14-10-2018 AMBLS11_13005 ad1fee48e9498781e22f658777c8b263 351 SUPERFAMILY SSF51735 121 244 1.28E-7 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_13005 ad1fee48e9498781e22f658777c8b263 351 Gene3D G3DSA:3.40.50.720 111 236 6.1E-10 T 14-10-2018 AMBLS11_13005 ad1fee48e9498781e22f658777c8b263 351 Gene3D G3DSA:1.10.287.70 2 103 4.7E-14 T 14-10-2018 AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 SUPERFAMILY SSF51735 141 305 9.25E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.656 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 Gene3D G3DSA:3.40.50.720 153 286 9.8E-122 T 14-10-2018 AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 SUPERFAMILY SSF50129 1 173 3.96E-54 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.3E-29 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 Gene3D G3DSA:3.90.180.10 20 328 9.8E-122 T 14-10-2018 AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 SMART SM00829 12 338 7.6E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 4 340 4.0E-176 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AMBLS11_00300 b0526aac292f1012e8a1bc7aa8d76e00 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.7E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_16865 2a4cd0e4321bfd8a4c0be849dae977bc 271 Pfam PF01061 ABC-2 type transporter 24 233 3.4E-41 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMBLS11_16865 2a4cd0e4321bfd8a4c0be849dae977bc 271 PRINTS PR00164 ABC-2 type transport system membrane protein signature 154 178 2.8E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_16865 2a4cd0e4321bfd8a4c0be849dae977bc 271 PRINTS PR00164 ABC-2 type transport system membrane protein signature 117 142 2.8E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_16865 2a4cd0e4321bfd8a4c0be849dae977bc 271 PRINTS PR00164 ABC-2 type transport system membrane protein signature 73 95 2.8E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_16865 2a4cd0e4321bfd8a4c0be849dae977bc 271 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 2.8E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_16865 2a4cd0e4321bfd8a4c0be849dae977bc 271 PIRSF PIRSF006648 1 267 1.4E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_04050 5c40392ca0f1816fc4026927b6ed5d50 1142 SUPERFAMILY SSF55486 470 710 1.17E-21 T 14-10-2018 AMBLS11_04050 5c40392ca0f1816fc4026927b6ed5d50 1142 Pfam PF02128 Fungalysin metallopeptidase (M36) 504 714 8.9E-11 T 14-10-2018 IPR001842 Peptidase M36, fungalysin GO:0004222|GO:0005615|GO:0008270 AMBLS11_04050 5c40392ca0f1816fc4026927b6ed5d50 1142 Gene3D G3DSA:1.10.390.10 529 730 2.0E-10 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AMBLS11_17315 8e3297b0dfca2bf1b641108e2382d19d 160 SUPERFAMILY SSF52540 26 136 5.0E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17315 8e3297b0dfca2bf1b641108e2382d19d 160 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 134 1.9E-38 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMBLS11_17315 8e3297b0dfca2bf1b641108e2382d19d 160 Gene3D G3DSA:3.40.50.300 5 159 3.2E-44 T 14-10-2018 AMBLS11_17315 8e3297b0dfca2bf1b641108e2382d19d 160 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 20 145 1.1E-44 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 215 467 7.3E-63 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 30 187 2.3E-35 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 Gene3D G3DSA:3.40.50.720 4 280 4.5E-98 T 14-10-2018 AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 SUPERFAMILY SSF51735 8 280 2.44E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 SUPERFAMILY SSF48179 282 482 7.48E-41 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 PRINTS PR00084 Mannitol dehydrogenase signature 247 262 1.9E-14 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 PRINTS PR00084 Mannitol dehydrogenase signature 178 191 1.9E-14 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 PRINTS PR00084 Mannitol dehydrogenase signature 31 41 1.9E-14 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 PRINTS PR00084 Mannitol dehydrogenase signature 217 230 1.9E-14 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMBLS11_11160 e8019234f628cc3762b0807a7f644d21 513 Gene3D G3DSA:1.10.1040.10 281 490 8.2E-50 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMBLS11_09765 7340ed528b86068a945c915a8687f832 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 129 1.8E-37 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AMBLS11_09765 7340ed528b86068a945c915a8687f832 129 SUPERFAMILY SSF75169 1 129 2.52E-27 T 14-10-2018 IPR027396 DsrEFH-like AMBLS11_09765 7340ed528b86068a945c915a8687f832 129 Gene3D G3DSA:3.40.1260.10 1 129 1.5E-39 T 14-10-2018 IPR027396 DsrEFH-like AMBLS11_09765 7340ed528b86068a945c915a8687f832 129 Pfam PF02635 DsrE/DsrF-like family 4 129 1.8E-15 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AMBLS11_15950 a5f9d1ee0876c23d5058e2235ad59076 392 Gene3D G3DSA:3.40.50.720 1 392 1.5E-173 T 14-10-2018 AMBLS11_15950 a5f9d1ee0876c23d5058e2235ad59076 392 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 4.0E-38 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_15950 a5f9d1ee0876c23d5058e2235ad59076 392 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 7.3E-25 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_15950 a5f9d1ee0876c23d5058e2235ad59076 392 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 54.142 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_15950 a5f9d1ee0876c23d5058e2235ad59076 392 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 2.6E-112 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_05290 87bdfd86690fca3104f8cff63a706358 934 Pfam PF00593 TonB dependent receptor 386 932 1.9E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_05290 87bdfd86690fca3104f8cff63a706358 934 Gene3D G3DSA:2.170.130.10 37 170 1.2E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_05290 87bdfd86690fca3104f8cff63a706358 934 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 165 9.0E-29 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_05290 87bdfd86690fca3104f8cff63a706358 934 SUPERFAMILY SSF56935 42 934 3.66E-106 T 14-10-2018 AMBLS11_07900 c684533b0850c5d4bed2773a4ea14df0 79 Gene3D G3DSA:1.10.1200.10 1 75 4.3E-30 T 14-10-2018 IPR036736 ACP-like superfamily AMBLS11_07900 c684533b0850c5d4bed2773a4ea14df0 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.1E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMBLS11_07900 c684533b0850c5d4bed2773a4ea14df0 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMBLS11_07900 c684533b0850c5d4bed2773a4ea14df0 79 SUPERFAMILY SSF47336 2 76 7.46E-24 T 14-10-2018 IPR036736 ACP-like superfamily AMBLS11_07900 c684533b0850c5d4bed2773a4ea14df0 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 23.101 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMBLS11_07900 c684533b0850c5d4bed2773a4ea14df0 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 3.4E-37 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.947 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 6.7E-69 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 Gene3D G3DSA:3.40.50.10860 8 276 1.6E-109 T 14-10-2018 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 SUPERFAMILY SSF51735 123 281 5.85E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 Gene3D G3DSA:3.40.50.720 6 259 1.6E-109 T 14-10-2018 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.2E-84 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.7E-40 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMBLS11_12750 d36fa179690a8db6e484cdac601b1f08 284 SUPERFAMILY SSF53223 3 122 2.01E-40 T 14-10-2018 AMBLS11_04575 2ee44d9c840d078618022dd52dddfab7 260 Pfam PF01255 Putative undecaprenyl diphosphate synthase 29 249 1.1E-82 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMBLS11_04575 2ee44d9c840d078618022dd52dddfab7 260 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 23 249 1.8E-100 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMBLS11_04575 2ee44d9c840d078618022dd52dddfab7 260 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 22 250 40.569 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMBLS11_04575 2ee44d9c840d078618022dd52dddfab7 260 Gene3D G3DSA:3.40.1180.10 6 250 6.0E-94 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMBLS11_04575 2ee44d9c840d078618022dd52dddfab7 260 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 195 212 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AMBLS11_04575 2ee44d9c840d078618022dd52dddfab7 260 SUPERFAMILY SSF64005 22 245 7.06E-88 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMBLS11_05850 3ecc1a34f30c4cb804384e6172ca405d 326 Pfam PF01882 Protein of unknown function DUF58 57 141 2.8E-21 T 14-10-2018 IPR002881 Domain of unknown function DUF58 AMBLS11_13270 3902c031b608e27031056ef98e2c1011 238 SUPERFAMILY SSF53850 51 228 1.18E-10 T 14-10-2018 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 Gene3D G3DSA:3.40.50.300 1 207 1.4E-62 T 14-10-2018 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 137 147 2.0E-27 T 14-10-2018 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 4 21 2.0E-27 T 14-10-2018 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 151 162 2.0E-27 T 14-10-2018 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 36 47 2.0E-27 T 14-10-2018 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 81 96 2.0E-27 T 14-10-2018 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 PRINTS PR00988 Uridine kinase signature 173 186 2.0E-27 T 14-10-2018 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 TIGRFAM TIGR00235 udk: uridine kinase 3 205 3.1E-73 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 193 3.0E-40 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AMBLS11_16000 b3f29ad70ee71d3779f3866e64a68439 207 SUPERFAMILY SSF52540 3 199 1.59E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06500 62d53513e760c20703f7a4a8d94bf002 89 Pfam PF13670 Peptidase propeptide and YPEB domain 9 83 5.4E-8 T 14-10-2018 IPR025711 PepSY domain AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 Gene3D G3DSA:3.20.20.70 1 315 9.0E-69 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 Pfam PF00701 Dihydrodipicolinate synthetase family 2 159 3.5E-21 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 Pfam PF00701 Dihydrodipicolinate synthetase family 210 311 5.1E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 6.4E-5 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 6.4E-5 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 6.4E-5 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 PIRSF PIRSF001365 183 315 9.1E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 PIRSF PIRSF001365 1 170 3.8E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 SUPERFAMILY SSF51569 2 312 1.56E-54 T 14-10-2018 AMBLS11_00855 c2402e1b3ae8d057308bb05ca806aa4a 315 SMART SM01130 1 313 3.0E-54 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMBLS11_07925 367204881161e9a26e87da1673f27143 295 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 193 3.2E-54 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_07925 367204881161e9a26e87da1673f27143 295 Pfam PF13177 DNA polymerase III, delta subunit 13 158 4.7E-45 T 14-10-2018 AMBLS11_07925 367204881161e9a26e87da1673f27143 295 Gene3D G3DSA:3.40.50.300 1 162 5.9E-50 T 14-10-2018 AMBLS11_07925 367204881161e9a26e87da1673f27143 295 SUPERFAMILY SSF52540 4 190 2.6E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06340 c9303936589e1757f8e1cf84e130eab9 453 Pfam PF00155 Aminotransferase class I and II 39 420 7.1E-51 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_06340 c9303936589e1757f8e1cf84e130eab9 453 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 260 269 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMBLS11_06340 c9303936589e1757f8e1cf84e130eab9 453 Gene3D G3DSA:3.40.640.10 50 313 1.6E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_06340 c9303936589e1757f8e1cf84e130eab9 453 SUPERFAMILY SSF53383 3 421 1.86E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_06340 c9303936589e1757f8e1cf84e130eab9 453 Gene3D G3DSA:3.90.1150.10 34 417 1.6E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_12525 c74598fa24f8c04fe84b1504b1d62318 451 SUPERFAMILY SSF56349 103 404 1.24E-28 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_12525 c74598fa24f8c04fe84b1504b1d62318 451 Gene3D G3DSA:3.30.160.390 7 94 2.8E-12 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMBLS11_12525 c74598fa24f8c04fe84b1504b1d62318 451 Gene3D G3DSA:1.10.443.10 209 394 4.7E-8 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_12525 c74598fa24f8c04fe84b1504b1d62318 451 Gene3D G3DSA:1.10.150.130 95 200 2.0E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_12525 c74598fa24f8c04fe84b1504b1d62318 451 Pfam PF13356 Arm DNA-binding domain 16 93 5.7E-13 T 14-10-2018 IPR025166 Integrase, DNA-binding domain AMBLS11_09070 fcc3b4090e095f55ccfd27e4de2612c9 376 SUPERFAMILY SSF52096 19 348 2.87E-60 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_09070 fcc3b4090e095f55ccfd27e4de2612c9 376 Gene3D G3DSA:3.90.226.10 7 376 5.6E-129 T 14-10-2018 AMBLS11_09070 fcc3b4090e095f55ccfd27e4de2612c9 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 22 362 1.1E-117 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AMBLS11_04590 2001a650ceb08405b3312cad9f4ca01d 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 449 5.8E-137 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AMBLS11_04590 2001a650ceb08405b3312cad9f4ca01d 450 SMART SM00228 115 186 0.012 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_04590 2001a650ceb08405b3312cad9f4ca01d 450 SMART SM00228 190 279 7.1E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_04590 2001a650ceb08405b3312cad9f4ca01d 450 Gene3D G3DSA:2.30.42.10 221 307 2.1E-20 T 14-10-2018 AMBLS11_04590 2001a650ceb08405b3312cad9f4ca01d 450 Pfam PF13180 PDZ domain 220 287 9.8E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMBLS11_04590 2001a650ceb08405b3312cad9f4ca01d 450 SUPERFAMILY SSF50156 88 180 1.3E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMBLS11_04590 2001a650ceb08405b3312cad9f4ca01d 450 SUPERFAMILY SSF50156 208 292 6.18E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMBLS11_04590 2001a650ceb08405b3312cad9f4ca01d 450 Pfam PF02163 Peptidase family M50 10 436 3.9E-84 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AMBLS11_04590 2001a650ceb08405b3312cad9f4ca01d 450 Gene3D G3DSA:2.30.42.10 126 219 3.8E-28 T 14-10-2018 AMBLS11_10630 0a078b2a95e0463f6e49e55a6acd260f 878 SUPERFAMILY SSF56935 61 878 7.83E-101 T 14-10-2018 AMBLS11_10630 0a078b2a95e0463f6e49e55a6acd260f 878 Pfam PF00593 TonB dependent receptor 309 875 4.0E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_10630 0a078b2a95e0463f6e49e55a6acd260f 878 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 186 3.9E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_10630 0a078b2a95e0463f6e49e55a6acd260f 878 Gene3D G3DSA:2.40.170.20 70 549 1.6E-68 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_10630 0a078b2a95e0463f6e49e55a6acd260f 878 Gene3D G3DSA:2.40.170.20 572 878 1.4E-51 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_13235 bcd9d8672b59c1efb620b8832fc95f1a 311 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 298 4.9E-63 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMBLS11_13235 bcd9d8672b59c1efb620b8832fc95f1a 311 PIRSF PIRSF026649 6 307 2.1E-73 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMBLS11_13235 bcd9d8672b59c1efb620b8832fc95f1a 311 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 7 308 41.129 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AMBLS11_13235 bcd9d8672b59c1efb620b8832fc95f1a 311 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 308 2.2E-96 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AMBLS11_12930 350c2d97c2219036123730bcbf83ea72 193 Pfam PF06411 HdeA/HdeB family 7 96 2.7E-6 T 14-10-2018 IPR010486 HNS-dependent expression A/B AMBLS11_12930 350c2d97c2219036123730bcbf83ea72 193 SUPERFAMILY SSF47090 132 191 4.71E-7 T 14-10-2018 IPR036365 PGBD-like superfamily AMBLS11_18270 d538c5f634e553fc33b97ffb0106e8cf 399 Pfam PF05134 Type II secretion system (T2SS), protein L 4 237 9.3E-57 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AMBLS11_18270 d538c5f634e553fc33b97ffb0106e8cf 399 SUPERFAMILY SSF53067 145 236 1.68E-19 T 14-10-2018 AMBLS11_18270 d538c5f634e553fc33b97ffb0106e8cf 399 Gene3D G3DSA:3.30.420.370 141 213 1.7E-79 T 14-10-2018 AMBLS11_18270 d538c5f634e553fc33b97ffb0106e8cf 399 PIRSF PIRSF015761 21 399 4.8E-27 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AMBLS11_18270 d538c5f634e553fc33b97ffb0106e8cf 399 SUPERFAMILY SSF53067 1 143 2.33E-38 T 14-10-2018 AMBLS11_18270 d538c5f634e553fc33b97ffb0106e8cf 399 Pfam PF12693 GspL periplasmic domain 246 397 5.9E-27 T 14-10-2018 IPR025691 GspL periplasmic domain AMBLS11_18270 d538c5f634e553fc33b97ffb0106e8cf 399 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 4 397 1.6E-77 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AMBLS11_18270 d538c5f634e553fc33b97ffb0106e8cf 399 Gene3D G3DSA:3.30.420.380 2 235 1.7E-79 T 14-10-2018 AMBLS11_18270 d538c5f634e553fc33b97ffb0106e8cf 399 Gene3D G3DSA:3.30.1360.100 313 399 3.3E-23 T 14-10-2018 AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 4.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 4.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 73 88 4.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 SUPERFAMILY SSF53474 32 300 1.05E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 Pfam PF00561 alpha/beta hydrolase fold 48 284 4.3E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 Gene3D G3DSA:3.40.50.1820 1 300 1.8E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 PRINTS PR00412 Epoxide hydrolase signature 73 88 6.5E-15 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 PRINTS PR00412 Epoxide hydrolase signature 119 132 6.5E-15 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 PRINTS PR00412 Epoxide hydrolase signature 275 297 6.5E-15 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMBLS11_07975 17685ee1a06775160f89371b9ce5b343 304 PRINTS PR00412 Epoxide hydrolase signature 53 71 6.5E-15 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 471 2.8E-132 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 746 0.0 T 14-10-2018 AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 Gene3D G3DSA:3.30.1360.40 242 335 3.0E-176 T 14-10-2018 AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 SMART SM00434 15 465 1.7E-226 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 Gene3D G3DSA:1.10.268.10 373 458 3.0E-176 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 Gene3D G3DSA:2.120.10.90 504 754 5.1E-9 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 SUPERFAMILY SSF101904 501 749 1.44E-48 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 Gene3D G3DSA:3.90.199.10 36 487 3.0E-176 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 SUPERFAMILY SSF56719 35 487 2.62E-153 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMBLS11_01925 0d5bbc7797d00ee8da609bcc4492e4c5 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.317 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMBLS11_10785 0fdfc0ac5f8981672fa1de722729ba83 475 Pfam PF00155 Aminotransferase class I and II 144 466 1.8E-34 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_10785 0fdfc0ac5f8981672fa1de722729ba83 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.4E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_10785 0fdfc0ac5f8981672fa1de722729ba83 475 Gene3D G3DSA:3.90.1150.10 108 469 2.2E-94 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_10785 0fdfc0ac5f8981672fa1de722729ba83 475 Gene3D G3DSA:3.40.640.10 146 365 2.2E-94 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_10785 0fdfc0ac5f8981672fa1de722729ba83 475 SMART SM00345 7 66 1.1E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_10785 0fdfc0ac5f8981672fa1de722729ba83 475 Gene3D G3DSA:1.10.10.10 1 68 5.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_10785 0fdfc0ac5f8981672fa1de722729ba83 475 SUPERFAMILY SSF53383 104 470 9.11E-86 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_10785 0fdfc0ac5f8981672fa1de722729ba83 475 SUPERFAMILY SSF46785 1 68 8.53E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_15890 5338cd2c7567d3485fec13988bc88f22 296 Pfam PF00753 Metallo-beta-lactamase superfamily 56 230 5.4E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_15890 5338cd2c7567d3485fec13988bc88f22 296 Gene3D G3DSA:3.60.15.10 39 256 1.8E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_15890 5338cd2c7567d3485fec13988bc88f22 296 SUPERFAMILY SSF56281 10 283 2.3E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_15890 5338cd2c7567d3485fec13988bc88f22 296 SMART SM00849 56 230 7.8E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_03935 a8bf8bb866a3fe70a2840247e7ec5fb4 199 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 78 107 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AMBLS11_03935 a8bf8bb866a3fe70a2840247e7ec5fb4 199 SUPERFAMILY SSF54980 136 188 4.82E-8 T 14-10-2018 IPR035647 EF-G domain III/V-like AMBLS11_03935 a8bf8bb866a3fe70a2840247e7ec5fb4 199 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 189 1.4E-54 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal AMBLS11_03935 a8bf8bb866a3fe70a2840247e7ec5fb4 199 Pfam PF01205 Uncharacterized protein family UPF0029 16 123 1.2E-31 T 14-10-2018 IPR001498 Impact, N-terminal AMBLS11_03935 a8bf8bb866a3fe70a2840247e7ec5fb4 199 Gene3D G3DSA:3.30.230.30 1 132 9.1E-51 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily AMBLS11_03935 a8bf8bb866a3fe70a2840247e7ec5fb4 199 SUPERFAMILY SSF54211 2 129 6.45E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_03935 a8bf8bb866a3fe70a2840247e7ec5fb4 199 Pfam PF09186 Domain of unknown function (DUF1949) 139 188 5.9E-7 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AMBLS11_13325 9af170c7796536739753cc9cc454ddb6 334 SUPERFAMILY SSF52540 9 241 2.11E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13325 9af170c7796536739753cc9cc454ddb6 334 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 2.9E-101 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis AMBLS11_13325 9af170c7796536739753cc9cc454ddb6 334 Gene3D G3DSA:3.40.50.300 3 171 2.2E-41 T 14-10-2018 AMBLS11_13325 9af170c7796536739753cc9cc454ddb6 334 Gene3D G3DSA:1.10.1580.10 174 266 1.4E-22 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily AMBLS11_13325 9af170c7796536739753cc9cc454ddb6 334 Pfam PF01926 50S ribosome-binding GTPase 117 175 5.4E-13 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMBLS11_13325 9af170c7796536739753cc9cc454ddb6 334 PIRSF PIRSF006230 278 334 1500.0 T 14-10-2018 IPR016478 GTPase, MTG1 AMBLS11_13325 9af170c7796536739753cc9cc454ddb6 334 PIRSF PIRSF006230 1 277 7.5E-99 T 14-10-2018 IPR016478 GTPase, MTG1 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 Gene3D G3DSA:3.40.50.720 8 200 2.4E-59 T 14-10-2018 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 9 175 1.1E-32 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 SMART SM00984 307 394 5.7E-14 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 9 383 9.0E-102 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 SUPERFAMILY SSF51735 9 201 1.46E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 Gene3D G3DSA:3.40.50.720 229 395 1.5E-67 T 14-10-2018 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 288 2.5E-27 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 Gene3D G3DSA:1.20.5.100 201 228 2.0E-20 T 14-10-2018 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 SUPERFAMILY SSF48179 198 294 1.22E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 PIRSF PIRSF500134 8 349 4.3E-120 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 PIRSF PIRSF500134 345 395 1.5 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 SUPERFAMILY SSF52413 290 394 1.02E-26 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 PIRSF PIRSF000124 8 395 3.1E-137 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMBLS11_16230 dba4bf4889271b275d06ee1aaa2c05b8 395 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 308 381 2.4E-8 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMBLS11_13720 406dd76f715c80e602281dd7da61a8f6 543 SUPERFAMILY SSF53474 361 424 1.04E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_01685 6367760f92e20b149866ab4d30b54d7d 382 Gene3D G3DSA:1.20.1090.10 183 382 3.1E-66 T 14-10-2018 AMBLS11_01685 6367760f92e20b149866ab4d30b54d7d 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 1.7E-113 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMBLS11_01685 6367760f92e20b149866ab4d30b54d7d 382 SUPERFAMILY SSF56796 5 379 8.64E-119 T 14-10-2018 AMBLS11_01685 6367760f92e20b149866ab4d30b54d7d 382 Gene3D G3DSA:3.40.50.1970 1 182 4.3E-52 T 14-10-2018 AMBLS11_08120 48184f727ffe288fb6fd42f1c3bd64c9 223 SMART SM00702 34 210 2.2E-17 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMBLS11_08120 48184f727ffe288fb6fd42f1c3bd64c9 223 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 119 210 5.8E-21 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMBLS11_08120 48184f727ffe288fb6fd42f1c3bd64c9 223 Gene3D G3DSA:2.60.120.620 18 214 1.3E-47 T 14-10-2018 AMBLS11_08985 66522f28b2735ee04b1c0b3684ed1c74 565 Pfam PF00128 Alpha amylase, catalytic domain 96 417 3.4E-45 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_08985 66522f28b2735ee04b1c0b3684ed1c74 565 SUPERFAMILY SSF51011 473 545 8.4E-5 T 14-10-2018 AMBLS11_08985 66522f28b2735ee04b1c0b3684ed1c74 565 SUPERFAMILY SSF51445 44 463 3.71E-70 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_08985 66522f28b2735ee04b1c0b3684ed1c74 565 SMART SM00642 52 454 1.9E-30 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_08985 66522f28b2735ee04b1c0b3684ed1c74 565 Gene3D G3DSA:3.20.20.80 35 456 6.2E-88 T 14-10-2018 AMBLS11_11935 0d92baada7776f87ee70251dd83e6a02 427 SMART SM00382 23 425 2.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_11935 0d92baada7776f87ee70251dd83e6a02 427 Pfam PF13175 AAA ATPase domain 18 410 1.2E-19 T 14-10-2018 AMBLS11_11935 0d92baada7776f87ee70251dd83e6a02 427 Gene3D G3DSA:3.40.50.300 2 421 4.7E-35 T 14-10-2018 AMBLS11_11935 0d92baada7776f87ee70251dd83e6a02 427 SUPERFAMILY SSF52540 3 418 5.58E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00700 0225a902dbfb9a376d179e20edf76af3 292 SUPERFAMILY SSF56059 99 282 5.47E-16 T 14-10-2018 AMBLS11_00700 0225a902dbfb9a376d179e20edf76af3 292 Gene3D G3DSA:3.40.50.20 40 82 4.9E-14 T 14-10-2018 AMBLS11_00700 0225a902dbfb9a376d179e20edf76af3 292 Gene3D G3DSA:3.30.470.20 83 231 4.9E-14 T 14-10-2018 AMBLS11_00700 0225a902dbfb9a376d179e20edf76af3 292 Gene3D G3DSA:3.30.1490.20 108 175 4.9E-14 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_00700 0225a902dbfb9a376d179e20edf76af3 292 Pfam PF08443 RimK-like ATP-grasp domain 155 259 1.1E-6 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AMBLS11_05430 76888ad20ab66a09a33d29373a9eb184 151 SMART SM00347 28 129 5.5E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_05430 76888ad20ab66a09a33d29373a9eb184 151 Pfam PF01047 MarR family 35 93 9.0E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_05430 76888ad20ab66a09a33d29373a9eb184 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMBLS11_05430 76888ad20ab66a09a33d29373a9eb184 151 SUPERFAMILY SSF46785 8 144 2.92E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_05430 76888ad20ab66a09a33d29373a9eb184 151 Gene3D G3DSA:1.10.10.10 10 149 2.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05430 76888ad20ab66a09a33d29373a9eb184 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_05430 76888ad20ab66a09a33d29373a9eb184 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_05430 76888ad20ab66a09a33d29373a9eb184 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 2.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_05430 76888ad20ab66a09a33d29373a9eb184 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_06505 d990b07f6897dbd00111cebc312c2972 154 SUPERFAMILY SSF50475 5 128 4.17E-22 T 14-10-2018 AMBLS11_06505 d990b07f6897dbd00111cebc312c2972 154 Gene3D G3DSA:2.30.110.10 2 139 5.7E-33 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMBLS11_06505 d990b07f6897dbd00111cebc312c2972 154 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 6 139 3.4E-28 T 14-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain AMBLS11_14440 c7eacf2195861470ac9ec60746fafda7 317 Gene3D G3DSA:3.40.50.1100 14 306 2.4E-53 T 14-10-2018 AMBLS11_14440 c7eacf2195861470ac9ec60746fafda7 317 PIRSF PIRSF006278 2 316 5.8E-58 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AMBLS11_14440 c7eacf2195861470ac9ec60746fafda7 317 Gene3D G3DSA:3.40.50.1100 47 147 2.4E-53 T 14-10-2018 AMBLS11_14440 c7eacf2195861470ac9ec60746fafda7 317 SUPERFAMILY SSF53686 10 310 1.58E-46 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMBLS11_14440 c7eacf2195861470ac9ec60746fafda7 317 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 14 303 1.5E-19 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 SUPERFAMILY SSF55073 534 719 2.2E-39 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 SUPERFAMILY SSF55785 390 516 1.26E-13 T 14-10-2018 IPR035965 PAS domain superfamily AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 Pfam PF00990 Diguanylate cyclase, GGDEF domain 572 713 7.5E-31 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 Gene3D G3DSA:3.30.70.270 518 717 8.7E-48 T 14-10-2018 AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 401 524 1.4E-9 T 14-10-2018 IPR000014 PAS domain AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 SMART SM00267 518 717 2.3E-41 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 Pfam PF00563 EAL domain 736 976 3.8E-59 T 14-10-2018 IPR001633 EAL domain AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 SUPERFAMILY SSF141868 735 987 3.4E-69 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 Gene3D G3DSA:3.20.20.450 718 983 5.2E-79 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 582 716 2.6E-33 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 Gene3D G3DSA:3.30.450.20 395 516 4.3E-13 T 14-10-2018 AMBLS11_15790 fc6e17dd4df7ffc22bea882ea56c8763 992 SMART SM00052 729 981 4.9E-66 T 14-10-2018 IPR001633 EAL domain AMBLS11_04900 ce96378e8b2a59bae22fcb02a82f2dd1 316 Gene3D G3DSA:3.30.1490.20 104 186 6.9E-36 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMBLS11_04900 ce96378e8b2a59bae22fcb02a82f2dd1 316 Pfam PF02655 ATP-grasp domain 142 268 4.9E-7 T 14-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 AMBLS11_04900 ce96378e8b2a59bae22fcb02a82f2dd1 316 Gene3D G3DSA:3.40.50.20 3 103 6.9E-36 T 14-10-2018 AMBLS11_04900 ce96378e8b2a59bae22fcb02a82f2dd1 316 SUPERFAMILY SSF56059 144 294 5.11E-9 T 14-10-2018 AMBLS11_04900 ce96378e8b2a59bae22fcb02a82f2dd1 316 Gene3D G3DSA:3.30.470.20 187 281 6.9E-36 T 14-10-2018 AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 1.6E-64 T 14-10-2018 AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 Gene3D G3DSA:3.40.50.720 1 252 3.9E-79 T 14-10-2018 AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 SUPERFAMILY SSF51735 9 252 7.68E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10400 43d4da2a0ba9676d6a7bacf59cade14c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 Pfam PF00154 recA bacterial DNA recombination protein 7 268 1.5E-145 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 PRINTS PR00142 RecA protein signature 297 314 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 PRINTS PR00142 RecA protein signature 127 156 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 PRINTS PR00142 RecA protein signature 210 238 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 PRINTS PR00142 RecA protein signature 243 272 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 PRINTS PR00142 RecA protein signature 165 194 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 PRINTS PR00142 RecA protein signature 93 122 8.2E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 Gene3D G3DSA:3.40.50.300 26 267 1.7E-82 T 14-10-2018 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.0E-175 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 SUPERFAMILY SSF52540 3 267 2.27E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 SMART SM00382 57 228 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 SUPERFAMILY SSF54752 268 324 1.57E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 ProSitePatterns PS00321 recA signature. 213 221 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 Gene3D G3DSA:3.30.250.10 268 343 3.5E-28 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AMBLS11_04275 1faf087eae8e9d5082d004895b79a1a6 348 Hamap MF_00268 Protein RecA [recA]. 5 329 51.803 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_01465 bf39840191afb8e4c37552663dce8382 176 Pfam PF03713 Domain of unknown function (DUF305) 92 153 3.2E-9 T 14-10-2018 IPR005183 Domain of unknown function DUF305 AMBLS11_01465 bf39840191afb8e4c37552663dce8382 176 Gene3D G3DSA:1.20.1260.10 83 172 1.5E-9 T 14-10-2018 IPR012347 Ferritin-like AMBLS11_09175 8e74abff515514d387da131b328294c7 546 SMART SM00028 451 484 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_09175 8e74abff515514d387da131b328294c7 546 SMART SM00028 231 264 2.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_09175 8e74abff515514d387da131b328294c7 546 SMART SM00028 197 230 0.51 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_09175 8e74abff515514d387da131b328294c7 546 SUPERFAMILY SSF52172 4 142 5.98E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_09175 8e74abff515514d387da131b328294c7 546 SUPERFAMILY SSF48452 172 497 5.22E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09175 8e74abff515514d387da131b328294c7 546 Gene3D G3DSA:3.40.50.2300 4 132 2.5E-21 T 14-10-2018 AMBLS11_09175 8e74abff515514d387da131b328294c7 546 Pfam PF00072 Response regulator receiver domain 8 123 6.5E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_09175 8e74abff515514d387da131b328294c7 546 SMART SM00448 6 123 7.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_09175 8e74abff515514d387da131b328294c7 546 Gene3D G3DSA:1.25.40.10 133 350 2.1E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09175 8e74abff515514d387da131b328294c7 546 Pfam PF13432 Tetratricopeptide repeat 202 263 4.0E-6 T 14-10-2018 AMBLS11_10505 06a1329a3e5fe6856d9d9444b1bf598b 259 Gene3D G3DSA:2.40.100.10 119 257 7.1E-46 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_10505 06a1329a3e5fe6856d9d9444b1bf598b 259 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 54 224 4.3E-48 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AMBLS11_10505 06a1329a3e5fe6856d9d9444b1bf598b 259 SMART SM00796 8 235 3.4E-49 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AMBLS11_10505 06a1329a3e5fe6856d9d9444b1bf598b 259 SUPERFAMILY SSF160467 9 125 8.5E-10 T 14-10-2018 AMBLS11_10505 06a1329a3e5fe6856d9d9444b1bf598b 259 Gene3D G3DSA:3.30.1360.40 9 105 1.5E-9 T 14-10-2018 AMBLS11_10505 06a1329a3e5fe6856d9d9444b1bf598b 259 SUPERFAMILY SSF50891 120 251 9.1E-36 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMBLS11_08930 3c7fbfe9dd6d3e088736b3172ff664b0 938 Pfam PF14905 Outer membrane protein beta-barrel family 558 732 3.4E-7 T 14-10-2018 AMBLS11_08930 3c7fbfe9dd6d3e088736b3172ff664b0 938 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 40 938 2.9E-157 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_08930 3c7fbfe9dd6d3e088736b3172ff664b0 938 Gene3D G3DSA:2.170.130.10 45 166 2.4E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_08930 3c7fbfe9dd6d3e088736b3172ff664b0 938 SUPERFAMILY SSF56935 25 938 1.21E-75 T 14-10-2018 AMBLS11_08930 3c7fbfe9dd6d3e088736b3172ff664b0 938 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 162 1.3E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_17800 a3121953835079de9632ec208e3efcd9 294 SUPERFAMILY SSF103481 185 280 5.49E-14 T 14-10-2018 AMBLS11_17800 a3121953835079de9632ec208e3efcd9 294 Pfam PF00892 EamA-like transporter family 6 136 1.0E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_17800 a3121953835079de9632ec208e3efcd9 294 Pfam PF00892 EamA-like transporter family 149 280 9.2E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_17800 a3121953835079de9632ec208e3efcd9 294 SUPERFAMILY SSF103481 38 138 6.41E-17 T 14-10-2018 AMBLS11_09240 00060f952dd865ec624b6ab43fe8db7b 457 Pfam PF03315 Serine dehydratase beta chain 3 156 1.5E-55 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AMBLS11_09240 00060f952dd865ec624b6ab43fe8db7b 457 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 454 5.3E-214 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AMBLS11_09240 00060f952dd865ec624b6ab43fe8db7b 457 Gene3D G3DSA:3.30.1330.90 10 160 2.6E-51 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMBLS11_09240 00060f952dd865ec624b6ab43fe8db7b 457 SUPERFAMILY SSF143548 16 158 1.73E-42 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMBLS11_09240 00060f952dd865ec624b6ab43fe8db7b 457 Pfam PF03313 Serine dehydratase alpha chain 189 451 5.0E-102 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AMBLS11_14750 e33f5f5838fdd8a0c209b5e6760ea05b 277 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 27 246 1.8E-76 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related AMBLS11_14750 e33f5f5838fdd8a0c209b5e6760ea05b 277 PIRSF PIRSF028756 5 273 1.8E-72 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AMBLS11_14750 e33f5f5838fdd8a0c209b5e6760ea05b 277 SUPERFAMILY SSF52540 57 247 2.99E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14750 e33f5f5838fdd8a0c209b5e6760ea05b 277 Gene3D G3DSA:3.40.50.300 11 266 3.2E-91 T 14-10-2018 AMBLS11_06145 0ab85ffa2866ed3e8bdbbbe392536688 288 SUPERFAMILY SSF74653 202 287 3.14E-20 T 14-10-2018 AMBLS11_06145 0ab85ffa2866ed3e8bdbbbe392536688 288 Pfam PF06519 TolA C-terminal 193 286 8.6E-32 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AMBLS11_06145 0ab85ffa2866ed3e8bdbbbe392536688 288 Gene3D G3DSA:3.30.1150.10 191 287 1.7E-29 T 14-10-2018 AMBLS11_06145 0ab85ffa2866ed3e8bdbbbe392536688 288 TIGRFAM TIGR02794 tolA_full: protein TolA 86 287 2.5E-37 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AMBLS11_02115 b3d1754108824c8a83a14e95170de9cb 136 Pfam PF02142 MGS-like domain 17 109 1.2E-15 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMBLS11_02115 b3d1754108824c8a83a14e95170de9cb 136 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 4 123 32.764 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMBLS11_02115 b3d1754108824c8a83a14e95170de9cb 136 ProSitePatterns PS01335 Methylglyoxal synthase active site. 57 65 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMBLS11_02115 b3d1754108824c8a83a14e95170de9cb 136 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 5 124 1.7E-54 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMBLS11_02115 b3d1754108824c8a83a14e95170de9cb 136 SUPERFAMILY SSF52335 3 130 3.43E-51 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMBLS11_02115 b3d1754108824c8a83a14e95170de9cb 136 Gene3D G3DSA:3.40.50.1380 1 136 1.2E-58 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMBLS11_02115 b3d1754108824c8a83a14e95170de9cb 136 SMART SM00851 17 110 1.9E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMBLS11_02115 b3d1754108824c8a83a14e95170de9cb 136 PIRSF PIRSF006614 1 135 2.5E-59 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 SMART SM01134 72 233 4.7E-64 T 14-10-2018 AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.0E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.0E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 Gene3D G3DSA:3.30.750.70 69 131 2.9E-8 T 14-10-2018 AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 SUPERFAMILY SSF46785 3 73 7.36E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.6E-19 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 SMART SM00420 6 58 1.1E-20 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 Gene3D G3DSA:1.10.10.10 1 55 5.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 SUPERFAMILY SSF100950 73 233 3.35E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMBLS11_00975 81412205befe0b7f9edf8990aeb9ed1e 252 Pfam PF00455 DeoR C terminal sensor domain 74 232 5.1E-49 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain AMBLS11_05720 d11d4681024459dc10de9c4d9dc035ba 193 Pfam PF04060 Putative Fe-S cluster 47 78 1.7E-14 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 AMBLS11_05720 d11d4681024459dc10de9c4d9dc035ba 193 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 183 8.1E-88 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AMBLS11_05720 d11d4681024459dc10de9c4d9dc035ba 193 SUPERFAMILY SSF54862 41 177 2.16E-31 T 14-10-2018 AMBLS11_05720 d11d4681024459dc10de9c4d9dc035ba 193 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMBLS11_05720 d11d4681024459dc10de9c4d9dc035ba 193 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 7 170 25.729 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AMBLS11_05720 d11d4681024459dc10de9c4d9dc035ba 193 Gene3D G3DSA:3.30.70.20 86 180 6.5E-22 T 14-10-2018 AMBLS11_05720 d11d4681024459dc10de9c4d9dc035ba 193 PIRSF PIRSF005784 6 191 4.6E-89 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AMBLS11_05720 d11d4681024459dc10de9c4d9dc035ba 193 Pfam PF14697 4Fe-4S dicluster domain 111 165 1.9E-18 T 14-10-2018 AMBLS11_05720 d11d4681024459dc10de9c4d9dc035ba 193 Gene3D G3DSA:1.10.15.40 41 85 1.4E-7 T 14-10-2018 AMBLS11_03730 01ac1075049deaf67538483b25387a66 798 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 164 8.7E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_03730 01ac1075049deaf67538483b25387a66 798 SUPERFAMILY SSF56935 32 797 4.4E-94 T 14-10-2018 AMBLS11_03730 01ac1075049deaf67538483b25387a66 798 Pfam PF00593 TonB dependent receptor 309 795 1.3E-30 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_03730 01ac1075049deaf67538483b25387a66 798 Gene3D G3DSA:2.40.170.20 45 798 4.9E-110 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_09530 fb7060b90f590698bf977981c9de8841 159 Pfam PF05751 FixH 7 147 9.4E-41 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH AMBLS11_13930 5b3ee3d394845c3af11f29ff4b1073cf 891 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 890 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMBLS11_13930 5b3ee3d394845c3af11f29ff4b1073cf 891 Gene3D G3DSA:3.40.50.970 56 470 8.5E-132 T 14-10-2018 AMBLS11_13930 5b3ee3d394845c3af11f29ff4b1073cf 891 Gene3D G3DSA:3.40.50.970 471 705 9.7E-108 T 14-10-2018 AMBLS11_13930 5b3ee3d394845c3af11f29ff4b1073cf 891 SUPERFAMILY SSF52518 57 467 3.93E-141 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_13930 5b3ee3d394845c3af11f29ff4b1073cf 891 SUPERFAMILY SSF52922 704 890 9.73E-52 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_13930 5b3ee3d394845c3af11f29ff4b1073cf 891 PIRSF PIRSF000156 1 891 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMBLS11_13930 5b3ee3d394845c3af11f29ff4b1073cf 891 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 293 1.0E-9 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMBLS11_13930 5b3ee3d394845c3af11f29ff4b1073cf 891 Gene3D G3DSA:3.40.50.920 708 891 2.0E-67 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMBLS11_13930 5b3ee3d394845c3af11f29ff4b1073cf 891 SUPERFAMILY SSF52518 472 700 3.89E-98 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMBLS11_18830 fcc38fb3e9c3c5105c305fd0b3a09ded 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.9E-113 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AMBLS11_18830 fcc38fb3e9c3c5105c305fd0b3a09ded 237 Gene3D G3DSA:3.30.230.70 13 237 7.1E-62 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_18830 fcc38fb3e9c3c5105c305fd0b3a09ded 237 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.179 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AMBLS11_18830 fcc38fb3e9c3c5105c305fd0b3a09ded 237 SUPERFAMILY SSF54211 1 181 1.11E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_18830 fcc38fb3e9c3c5105c305fd0b3a09ded 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 5.8E-24 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_18830 fcc38fb3e9c3c5105c305fd0b3a09ded 237 Pfam PF03725 3' exoribonuclease family, domain 2 157 223 3.5E-9 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_18830 fcc38fb3e9c3c5105c305fd0b3a09ded 237 SUPERFAMILY SSF55666 153 236 4.06E-24 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMBLS11_18830 fcc38fb3e9c3c5105c305fd0b3a09ded 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site AMBLS11_08620 b59d62082acdecdaad496e8ac803d61f 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 39.403 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMBLS11_08620 b59d62082acdecdaad496e8ac803d61f 415 PIRSF PIRSF000151 1 415 3.6E-165 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMBLS11_08620 b59d62082acdecdaad496e8ac803d61f 415 Pfam PF00171 Aldehyde dehydrogenase family 6 282 1.2E-18 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMBLS11_08620 b59d62082acdecdaad496e8ac803d61f 415 SUPERFAMILY SSF53720 4 414 5.89E-113 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_08620 b59d62082acdecdaad496e8ac803d61f 415 Gene3D G3DSA:3.40.309.10 224 372 6.7E-152 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMBLS11_08620 b59d62082acdecdaad496e8ac803d61f 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMBLS11_08620 b59d62082acdecdaad496e8ac803d61f 415 Gene3D G3DSA:3.40.605.10 10 411 6.7E-152 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_08620 b59d62082acdecdaad496e8ac803d61f 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 1.1E-134 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMBLS11_08825 f10bbed60d01fef7161d9fe0f3cc3252 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 242 9.4E-99 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AMBLS11_08825 f10bbed60d01fef7161d9fe0f3cc3252 248 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 42.029 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AMBLS11_08825 f10bbed60d01fef7161d9fe0f3cc3252 248 Pfam PF02348 Cytidylyltransferase 5 222 3.5E-62 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AMBLS11_08825 f10bbed60d01fef7161d9fe0f3cc3252 248 SUPERFAMILY SSF53448 3 244 7.89E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_08825 f10bbed60d01fef7161d9fe0f3cc3252 248 Gene3D G3DSA:3.90.550.10 1 248 2.6E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_17745 1bb9681911c0c60053f6792d760fd4aa 452 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 452 3.2E-112 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMBLS11_17745 1bb9681911c0c60053f6792d760fd4aa 452 Gene3D G3DSA:2.40.160.60 26 452 6.1E-124 T 14-10-2018 AMBLS11_17745 1bb9681911c0c60053f6792d760fd4aa 452 SUPERFAMILY SSF56935 26 452 2.88E-90 T 14-10-2018 AMBLS11_09515 63f97215f8ae080694da83406fa0a203 201 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 199 6.9E-84 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMBLS11_09515 63f97215f8ae080694da83406fa0a203 201 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 182 5.9E-83 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMBLS11_09515 63f97215f8ae080694da83406fa0a203 201 Gene3D G3DSA:1.10.760.10 42 201 1.9E-75 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_09515 63f97215f8ae080694da83406fa0a203 201 SUPERFAMILY SSF46626 18 197 2.09E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_10755 1d54a7c4b2292bbec4b7bf8abc72e71c 946 SUPERFAMILY SSF56935 38 945 5.04E-92 T 14-10-2018 AMBLS11_10755 1d54a7c4b2292bbec4b7bf8abc72e71c 946 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 164 3.6E-20 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_10755 1d54a7c4b2292bbec4b7bf8abc72e71c 946 Pfam PF00593 TonB dependent receptor 382 945 1.4E-42 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_10755 1d54a7c4b2292bbec4b7bf8abc72e71c 946 Gene3D G3DSA:2.170.130.10 32 168 3.5E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_09330 d7b9c5f77fed45dafbf81489efa25341 222 SMART SM00945 5 119 6.9E-56 T 14-10-2018 IPR016103 ProQ/FinO domain AMBLS11_09330 d7b9c5f77fed45dafbf81489efa25341 222 Pfam PF17516 ProQ C-terminal domain 167 215 8.8E-23 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal AMBLS11_09330 d7b9c5f77fed45dafbf81489efa25341 222 Gene3D G3DSA:1.10.1710.10 2 120 1.3E-21 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily AMBLS11_09330 d7b9c5f77fed45dafbf81489efa25341 222 Pfam PF04352 ProQ/FINO family 8 115 3.6E-41 T 14-10-2018 IPR016103 ProQ/FinO domain AMBLS11_09330 d7b9c5f77fed45dafbf81489efa25341 222 Hamap MF_00749 RNA chaperone ProQ [proQ]. 2 217 27.0 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AMBLS11_09330 d7b9c5f77fed45dafbf81489efa25341 222 SUPERFAMILY SSF48657 4 117 2.22E-35 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily AMBLS11_12415 6e21b62dc84c5c5cd9a7ff891cdab608 507 Pfam PF06074 Protein of unknown function (DUF935) 37 500 2.0E-83 T 14-10-2018 IPR009279 Protein of unknown function DUF935 AMBLS11_03965 93f268a503e77365b53534c197dfe91e 515 Gene3D G3DSA:3.30.160.720 329 392 2.5E-14 T 14-10-2018 AMBLS11_03965 93f268a503e77365b53534c197dfe91e 515 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 293 425 2.9E-21 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AMBLS11_03965 93f268a503e77365b53534c197dfe91e 515 Pfam PF00149 Calcineurin-like phosphoesterase 1 242 2.4E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMBLS11_03965 93f268a503e77365b53534c197dfe91e 515 SUPERFAMILY SSF56300 1 320 3.46E-54 T 14-10-2018 AMBLS11_03965 93f268a503e77365b53534c197dfe91e 515 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 270 1.2E-68 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AMBLS11_03965 93f268a503e77365b53534c197dfe91e 515 Gene3D G3DSA:3.60.21.10 1 293 1.0E-84 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMBLS11_08865 789ff7323698b16c25a940bc0ca807a2 287 Gene3D G3DSA:2.60.120.10 22 281 1.3E-100 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_08865 789ff7323698b16c25a940bc0ca807a2 287 SUPERFAMILY SSF51182 10 283 1.71E-84 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_08865 789ff7323698b16c25a940bc0ca807a2 287 Pfam PF05726 Pirin C-terminal cupin domain 181 284 3.3E-26 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AMBLS11_08865 789ff7323698b16c25a940bc0ca807a2 287 PIRSF PIRSF006232 7 287 1.5E-96 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AMBLS11_08865 789ff7323698b16c25a940bc0ca807a2 287 Pfam PF02678 Pirin 27 126 1.7E-36 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AMBLS11_08865 789ff7323698b16c25a940bc0ca807a2 287 Gene3D G3DSA:2.60.120.10 148 255 1.3E-100 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_15305 7b2f68ab54fb4241390951de4ad40309 505 Gene3D G3DSA:3.40.309.10 270 500 5.8E-71 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMBLS11_15305 7b2f68ab54fb4241390951de4ad40309 505 Pfam PF00171 Aldehyde dehydrogenase family 27 492 1.1E-164 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMBLS11_15305 7b2f68ab54fb4241390951de4ad40309 505 Gene3D G3DSA:3.40.605.10 13 269 6.2E-96 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_15305 7b2f68ab54fb4241390951de4ad40309 505 SUPERFAMILY SSF53720 15 496 7.07E-164 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_15305 7b2f68ab54fb4241390951de4ad40309 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMBLS11_15305 7b2f68ab54fb4241390951de4ad40309 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMBLS11_05740 4d08429a9b099849004ed0fa58e3e80b 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.9E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05740 4d08429a9b099849004ed0fa58e3e80b 308 SUPERFAMILY SSF53850 107 302 7.06E-13 T 14-10-2018 AMBLS11_05740 4d08429a9b099849004ed0fa58e3e80b 308 Pfam PF03466 LysR substrate binding domain 116 296 4.6E-8 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_05740 4d08429a9b099849004ed0fa58e3e80b 308 Gene3D G3DSA:1.10.10.10 9 99 1.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05740 4d08429a9b099849004ed0fa58e3e80b 308 Gene3D G3DSA:3.40.190.290 102 304 9.1E-8 T 14-10-2018 AMBLS11_05740 4d08429a9b099849004ed0fa58e3e80b 308 SUPERFAMILY SSF46785 9 94 2.72E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_13630 11ecbfc074711cdb01cef088db9e453c 310 SUPERFAMILY SSF55729 160 292 1.89E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_13630 11ecbfc074711cdb01cef088db9e453c 310 SUPERFAMILY SSF46785 11 131 4.05E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_13630 11ecbfc074711cdb01cef088db9e453c 310 Gene3D G3DSA:1.10.10.10 8 136 5.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_13630 11ecbfc074711cdb01cef088db9e453c 310 Pfam PF12802 MarR family 38 94 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_13630 11ecbfc074711cdb01cef088db9e453c 310 Pfam PF00583 Acetyltransferase (GNAT) family 195 288 2.1E-14 T 14-10-2018 IPR000182 GNAT domain AMBLS11_13630 11ecbfc074711cdb01cef088db9e453c 310 Gene3D G3DSA:3.40.630.30 158 307 2.1E-27 T 14-10-2018 AMBLS11_11270 74b9efe8022d517ca76ffc36b83866d4 509 Pfam PF13487 HD domain 382 446 5.3E-18 T 14-10-2018 AMBLS11_11270 74b9efe8022d517ca76ffc36b83866d4 509 SMART SM00471 327 464 1.8E-7 T 14-10-2018 IPR003607 HD/PDEase domain AMBLS11_11270 74b9efe8022d517ca76ffc36b83866d4 509 SUPERFAMILY SSF52172 18 153 1.85E-10 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_11270 74b9efe8022d517ca76ffc36b83866d4 509 Gene3D G3DSA:3.40.50.2300 8 161 1.1E-12 T 14-10-2018 AMBLS11_11270 74b9efe8022d517ca76ffc36b83866d4 509 Pfam PF11849 Domain of unknown function (DUF3369) 141 308 4.4E-39 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 AMBLS11_11270 74b9efe8022d517ca76ffc36b83866d4 509 Gene3D G3DSA:1.10.3210.10 305 507 2.9E-70 T 14-10-2018 AMBLS11_11270 74b9efe8022d517ca76ffc36b83866d4 509 SUPERFAMILY SSF109604 320 495 5.97E-38 T 14-10-2018 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 SUPERFAMILY SSF55681 8 290 2.88E-137 T 14-10-2018 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 6.4E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 6.4E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 6.4E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 6.4E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 6.4E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 251 267 6.4E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 Gene3D G3DSA:1.20.58.180 215 295 7.3E-36 T 14-10-2018 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 299 5.5E-172 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 Gene3D G3DSA:3.30.930.10 1 214 3.9E-111 T 14-10-2018 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 290 2.1E-152 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00035 d5c55534201d745ed5f0e974a09957a7 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 291 61.4 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMBLS11_00595 d4e4f0a05f332e04094a90d7ff9c1e42 72 Pfam PF11127 Protein of unknown function (DUF2892) 4 70 6.3E-12 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 AMBLS11_14510 8abfd84e47d8862457d1d294dd9b1806 191 SMART SM00749 51 115 67.0 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AMBLS11_14510 8abfd84e47d8862457d1d294dd9b1806 191 SMART SM00749 129 191 0.033 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AMBLS11_14510 8abfd84e47d8862457d1d294dd9b1806 191 Pfam PF04972 BON domain 124 190 2.4E-12 T 14-10-2018 IPR007055 BON domain AMBLS11_14510 8abfd84e47d8862457d1d294dd9b1806 191 Pfam PF04972 BON domain 63 114 2.2E-12 T 14-10-2018 IPR007055 BON domain AMBLS11_05835 9156d5ce12d98cf6f1e2ec158160dee1 680 Pfam PF13519 von Willebrand factor type A domain 99 205 2.9E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A AMBLS11_05835 9156d5ce12d98cf6f1e2ec158160dee1 680 SMART SM00028 445 478 1.8E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMBLS11_05835 9156d5ce12d98cf6f1e2ec158160dee1 680 Gene3D G3DSA:3.40.50.410 95 291 1.6E-28 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMBLS11_05835 9156d5ce12d98cf6f1e2ec158160dee1 680 SUPERFAMILY SSF48452 399 497 1.04E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_05835 9156d5ce12d98cf6f1e2ec158160dee1 680 Pfam PF07719 Tetratricopeptide repeat 445 477 7.3E-7 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 AMBLS11_05835 9156d5ce12d98cf6f1e2ec158160dee1 680 SUPERFAMILY SSF53300 99 274 1.56E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMBLS11_05835 9156d5ce12d98cf6f1e2ec158160dee1 680 Gene3D G3DSA:1.25.40.10 394 506 3.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_02570 616326ca063ef9dee727da74ab8446c0 87 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 6 81 7.1E-26 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AMBLS11_02570 616326ca063ef9dee727da74ab8446c0 87 Gene3D G3DSA:3.10.450.530 1 83 1.2E-15 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 Gene3D G3DSA:1.10.287.470 103 265 9.6E-18 T 14-10-2018 AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 Gene3D G3DSA:2.40.50.100 78 301 9.6E-18 T 14-10-2018 AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 Gene3D G3DSA:2.40.30.170 302 373 9.6E-18 T 14-10-2018 AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 SUPERFAMILY SSF56954 126 229 3.4E-5 T 14-10-2018 AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 400 417 2.2E-17 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 334 2.2E-17 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 400 2.2E-17 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 277 298 2.2E-17 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 2.2E-17 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMBLS11_16640 4489baaf8122b6612fd01a558113329a 417 Pfam PF13437 HlyD family secretion protein 265 363 1.1E-13 T 14-10-2018 AMBLS11_13480 5f325fedab933b42744a79c4c306f9c7 168 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 55 2.3E-8 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMBLS11_13480 5f325fedab933b42744a79c4c306f9c7 168 SUPERFAMILY SSF47741 86 165 5.76E-26 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMBLS11_13480 5f325fedab933b42744a79c4c306f9c7 168 Gene3D G3DSA:1.10.150.120 79 167 1.1E-29 T 14-10-2018 AMBLS11_13480 5f325fedab933b42744a79c4c306f9c7 168 Pfam PF01799 [2Fe-2S] binding domain 72 159 3.0E-28 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMBLS11_13480 5f325fedab933b42744a79c4c306f9c7 168 SUPERFAMILY SSF54292 2 77 4.33E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMBLS11_13480 5f325fedab933b42744a79c4c306f9c7 168 Gene3D G3DSA:3.10.20.30 1 75 4.4E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_13480 5f325fedab933b42744a79c4c306f9c7 168 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMBLS11_06070 5d0dccf41741138b6e8389ba35f374d3 690 SMART SM00052 430 675 3.2E-90 T 14-10-2018 IPR001633 EAL domain AMBLS11_06070 5d0dccf41741138b6e8389ba35f374d3 690 SMART SM00267 248 420 1.6E-57 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06070 5d0dccf41741138b6e8389ba35f374d3 690 SUPERFAMILY SSF55073 264 422 2.35E-46 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_06070 5d0dccf41741138b6e8389ba35f374d3 690 SUPERFAMILY SSF141868 437 679 3.79E-80 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_06070 5d0dccf41741138b6e8389ba35f374d3 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 418 1.8E-38 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06070 5d0dccf41741138b6e8389ba35f374d3 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 415 1.7E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_06070 5d0dccf41741138b6e8389ba35f374d3 690 Pfam PF00563 EAL domain 438 670 4.8E-65 T 14-10-2018 IPR001633 EAL domain AMBLS11_06070 5d0dccf41741138b6e8389ba35f374d3 690 Gene3D G3DSA:3.30.70.270 254 432 1.5E-54 T 14-10-2018 AMBLS11_06070 5d0dccf41741138b6e8389ba35f374d3 690 Gene3D G3DSA:3.20.20.450 433 680 2.7E-84 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_02140 e870cb4d00ef66393edd0ca7bfbfe5a9 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.682 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AMBLS11_02140 e870cb4d00ef66393edd0ca7bfbfe5a9 154 PIRSF PIRSF029256 1 154 2.5E-66 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AMBLS11_02140 e870cb4d00ef66393edd0ca7bfbfe5a9 154 Gene3D G3DSA:3.40.1280.10 1 154 8.0E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMBLS11_02140 e870cb4d00ef66393edd0ca7bfbfe5a9 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 2.1E-63 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AMBLS11_02140 e870cb4d00ef66393edd0ca7bfbfe5a9 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.2E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMBLS11_02140 e870cb4d00ef66393edd0ca7bfbfe5a9 154 SUPERFAMILY SSF75217 2 152 2.35E-44 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 Gene3D G3DSA:3.30.300.10 406 525 2.9E-50 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 SUPERFAMILY SSF52317 8 237 1.97E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 2.1E-39 T 14-10-2018 IPR017926 Glutamine amidotransferase AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 3.1E-82 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 7.3E-155 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 Gene3D G3DSA:3.40.50.880 9 206 6.8E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 SUPERFAMILY SSF52402 197 420 9.92E-60 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 Pfam PF00958 GMP synthase C terminal domain 433 524 4.2E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.583 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.6E-7 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.6E-7 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.6E-7 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 2.9E-5 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 2.9E-5 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 2.9E-5 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 SUPERFAMILY SSF54810 405 525 2.22E-50 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 Pfam PF02540 NAD synthase 216 260 8.1E-7 T 14-10-2018 IPR022310 NAD/GMP synthase AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.2E-6 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.2E-6 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.2E-6 T 14-10-2018 AMBLS11_12805 d1ec1ebb9723e1227036f6ecd1ed795b 525 Gene3D G3DSA:3.40.50.620 209 405 8.8E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Gene3D G3DSA:3.30.930.10 488 692 6.9E-57 T 14-10-2018 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.5E-19 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Gene3D G3DSA:3.30.56.10 7 179 2.4E-75 T 14-10-2018 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Gene3D G3DSA:2.40.50.140 39 154 2.4E-75 T 14-10-2018 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 SMART SM00873 212 385 8.4E-94 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 SUPERFAMILY SSF50249 35 197 1.23E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 SUPERFAMILY SSF46955 404 475 3.57E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Pfam PF01588 Putative tRNA binding domain 46 145 2.3E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 2.0E-24 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Pfam PF03483 B3/4 domain 212 385 2.1E-67 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 SMART SM00874 403 471 4.5E-30 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Gene3D G3DSA:3.30.56.10 401 475 1.5E-27 T 14-10-2018 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 SMART SM00896 701 794 3.5E-36 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 SUPERFAMILY SSF56037 196 394 2.12E-73 T 14-10-2018 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.7E-272 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 SUPERFAMILY SSF54991 697 794 3.14E-27 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.422 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 SUPERFAMILY SSF55681 467 690 2.63E-49 T 14-10-2018 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Gene3D G3DSA:3.50.40.10 197 395 1.1E-77 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AMBLS11_07495 b15ba4161e1f07dcd0aac9eb0b6b105d 795 Gene3D G3DSA:3.30.70.380 702 795 5.3E-27 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AMBLS11_08335 ea75ff667e0b654c5dac16841314df31 275 SUPERFAMILY SSF55073 48 203 1.52E-26 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_08335 ea75ff667e0b654c5dac16841314df31 275 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 49 207 2.7E-23 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMBLS11_08335 ea75ff667e0b654c5dac16841314df31 275 SMART SM00044 15 215 1.4E-4 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMBLS11_08335 ea75ff667e0b654c5dac16841314df31 275 Gene3D G3DSA:3.30.70.1230 38 219 5.1E-26 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 Gene3D G3DSA:3.90.120.10 278 366 4.6E-96 T 14-10-2018 AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 205 219 5.5E-13 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 250 263 5.5E-13 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 97 113 5.5E-13 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 SUPERFAMILY SSF53335 96 402 4.47E-82 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 Pfam PF00145 C-5 cytosine-specific DNA methylase 96 401 6.5E-86 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 98 400 2.9E-89 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 Gene3D G3DSA:3.40.50.150 97 394 4.6E-96 T 14-10-2018 AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 157 169 - T 14-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 AMBLS11_00370 702a9411d513f1d5e255a0c727f2da01 405 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 382 400 - T 14-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AMBLS11_11590 860d92da33954ccb9876fb6fb4f1f6f0 246 Pfam PF04315 Elongation factor P hydroxylase 58 211 1.2E-72 T 14-10-2018 IPR007411 Elongation factor P hydroxylase AMBLS11_10545 7c321d9687ac88b79e78b24362bebd6a 264 Pfam PF09955 Predicted integral membrane protein (DUF2189) 78 191 4.7E-25 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 AMBLS11_11185 e3216a5d96b4227bf7fdb8c16b67365a 401 Pfam PF07470 Glycosyl Hydrolase Family 88 39 396 3.3E-97 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 AMBLS11_11185 e3216a5d96b4227bf7fdb8c16b67365a 401 Gene3D G3DSA:1.50.10.10 36 400 1.0E-136 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMBLS11_11185 e3216a5d96b4227bf7fdb8c16b67365a 401 SUPERFAMILY SSF48208 56 396 6.26E-69 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMBLS11_14175 96d7f3c5bf1d182d8dc26101c31b206d 265 Pfam PF01435 Peptidase family M48 65 246 1.4E-39 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMBLS11_14175 96d7f3c5bf1d182d8dc26101c31b206d 265 Gene3D G3DSA:3.30.2010.10 53 144 2.5E-6 T 14-10-2018 AMBLS11_16875 16acfe8e50383e7e32515a9fec8ab478 229 Pfam PF00072 Response regulator receiver domain 5 116 8.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16875 16acfe8e50383e7e32515a9fec8ab478 229 Gene3D G3DSA:1.10.10.10 128 229 2.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_16875 16acfe8e50383e7e32515a9fec8ab478 229 SMART SM00862 154 227 1.9E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_16875 16acfe8e50383e7e32515a9fec8ab478 229 TIGRFAM TIGR03787 marine_sort_RR: proteobacterial dedicated sortase system response regulator 3 228 4.3E-120 T 14-10-2018 IPR022305 Sortase system response regulator AMBLS11_16875 16acfe8e50383e7e32515a9fec8ab478 229 SMART SM00448 3 116 1.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_16875 16acfe8e50383e7e32515a9fec8ab478 229 Gene3D G3DSA:3.40.50.2300 1 124 2.5E-27 T 14-10-2018 AMBLS11_16875 16acfe8e50383e7e32515a9fec8ab478 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 226 6.1E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_16875 16acfe8e50383e7e32515a9fec8ab478 229 SUPERFAMILY SSF46894 136 227 5.67E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_16875 16acfe8e50383e7e32515a9fec8ab478 229 SUPERFAMILY SSF52172 2 134 1.39E-29 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_02825 fe80ceca3cfdabf74c8be186b8aae413 465 Pfam PF02321 Outer membrane efflux protein 244 442 1.7E-34 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_02825 fe80ceca3cfdabf74c8be186b8aae413 465 Pfam PF02321 Outer membrane efflux protein 24 219 6.5E-30 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_02825 fe80ceca3cfdabf74c8be186b8aae413 465 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 454 9.6E-117 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AMBLS11_02825 fe80ceca3cfdabf74c8be186b8aae413 465 SUPERFAMILY SSF56954 1 444 4.71E-96 T 14-10-2018 AMBLS11_02825 fe80ceca3cfdabf74c8be186b8aae413 465 Gene3D G3DSA:1.20.1600.10 21 464 8.1E-129 T 14-10-2018 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.3E-12 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.3E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.3E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.3E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.3E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.3E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.3E-37 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.2E-177 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 6.1E-122 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 SUPERFAMILY SSF48168 10 221 3.4E-73 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 Gene3D G3DSA:3.20.70.20 78 741 1.1E-157 T 14-10-2018 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 SUPERFAMILY SSF51998 222 741 6.71E-169 T 14-10-2018 AMBLS11_09905 07cb49bf2d1c949f4fcf4dbf1f4942fb 773 Pfam PF03477 ATP cone domain 6 92 5.9E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AMBLS11_13455 09923ce99ca87cfba19ea18947b1d5bd 413 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 308 371 1.0E-15 T 14-10-2018 IPR006260 TonB/TolA, C-terminal AMBLS11_13455 09923ce99ca87cfba19ea18947b1d5bd 413 Pfam PF05569 BlaR1 peptidase M56 84 256 3.7E-33 T 14-10-2018 IPR008756 Peptidase M56 AMBLS11_13455 09923ce99ca87cfba19ea18947b1d5bd 413 PRINTS PR01374 Gram-negative bacterial tonB protein signature 323 341 1.6E-9 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_13455 09923ce99ca87cfba19ea18947b1d5bd 413 PRINTS PR01374 Gram-negative bacterial tonB protein signature 342 359 1.6E-9 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_13455 09923ce99ca87cfba19ea18947b1d5bd 413 PRINTS PR01374 Gram-negative bacterial tonB protein signature 302 323 1.6E-9 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AMBLS11_13455 09923ce99ca87cfba19ea18947b1d5bd 413 SUPERFAMILY SSF74653 300 376 4.32E-22 T 14-10-2018 AMBLS11_13455 09923ce99ca87cfba19ea18947b1d5bd 413 Gene3D G3DSA:3.30.1150.10 285 385 6.7E-23 T 14-10-2018 AMBLS11_13455 09923ce99ca87cfba19ea18947b1d5bd 413 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 307 383 3.1E-18 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMBLS11_16790 dbb551fa06fc9e07cf6f8ddd92aecd30 227 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMBLS11_16790 dbb551fa06fc9e07cf6f8ddd92aecd30 227 PIRSF PIRSF004553 44 227 2.0E-51 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AMBLS11_16790 dbb551fa06fc9e07cf6f8ddd92aecd30 227 Gene3D G3DSA:3.40.50.150 32 227 3.7E-57 T 14-10-2018 AMBLS11_16790 dbb551fa06fc9e07cf6f8ddd92aecd30 227 Pfam PF03602 Conserved hypothetical protein 95 45 223 3.6E-56 T 14-10-2018 AMBLS11_16790 dbb551fa06fc9e07cf6f8ddd92aecd30 227 SUPERFAMILY SSF53335 45 221 1.53E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_16790 dbb551fa06fc9e07cf6f8ddd92aecd30 227 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 41 224 2.2E-57 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AMBLS11_17040 11ec2c09a25857d2c5da725713520a82 172 SUPERFAMILY SSF160369 6 171 8.24E-47 T 14-10-2018 AMBLS11_17040 11ec2c09a25857d2c5da725713520a82 172 Pfam PF00466 Ribosomal protein L10 6 99 3.0E-23 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AMBLS11_17040 11ec2c09a25857d2c5da725713520a82 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 24.423 T 14-10-2018 IPR022973 Ribosomal protein L10 AMBLS11_17040 11ec2c09a25857d2c5da725713520a82 172 Gene3D G3DSA:3.30.70.1730 6 134 7.4E-28 T 14-10-2018 AMBLS11_07545 0319499a463aed0fac6a77fe26ae1412 436 Pfam PF12704 MacB-like periplasmic core domain 32 264 3.2E-17 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMBLS11_07545 0319499a463aed0fac6a77fe26ae1412 436 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 436 6.2E-113 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AMBLS11_07545 0319499a463aed0fac6a77fe26ae1412 436 Pfam PF02687 FtsX-like permease family 329 429 1.4E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 282 302 7.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 549 578 7.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 499 7.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 501 530 7.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 Gene3D G3DSA:3.30.450.20 164 281 9.8E-22 T 14-10-2018 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 Pfam PF02743 Cache domain 44 267 4.2E-17 T 14-10-2018 IPR033479 Double Cache domain 1 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 Gene3D G3DSA:1.10.287.950 305 636 7.9E-71 T 14-10-2018 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 SUPERFAMILY SSF58104 327 636 4.05E-74 T 14-10-2018 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 SMART SM00283 374 635 2.7E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 Pfam PF00672 HAMP domain 306 355 2.2E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 601 1.1E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_01795 aeac890b840348bdfa6c6da632241c20 636 SMART SM00304 305 359 6.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_13090 a251dc36d8dfd85fb7f07cf54fe16b9a 298 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 273 298 3.0E-6 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain AMBLS11_13090 a251dc36d8dfd85fb7f07cf54fe16b9a 298 Pfam PF07589 PEP-CTERM motif 273 297 5.0E-5 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain AMBLS11_01915 d18ec2203b0a0fa4accf865726da4a8f 231 Pfam PF11201 Protein of unknown function (DUF2982) 73 223 1.0E-58 T 14-10-2018 IPR021367 Protein of unknown function DUF2982 AMBLS11_06220 cbea0c3067a3c338bcac0e5a63255ad3 414 SUPERFAMILY SSF56935 25 388 1.34E-14 T 14-10-2018 AMBLS11_09185 564033e4ea657a0c71e519412435728a 331 Gene3D G3DSA:3.30.70.100 1 96 2.3E-34 T 14-10-2018 AMBLS11_09185 564033e4ea657a0c71e519412435728a 331 SUPERFAMILY SSF52821 94 241 1.37E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_09185 564033e4ea657a0c71e519412435728a 331 Gene3D G3DSA:3.40.250.10 97 250 6.9E-52 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_09185 564033e4ea657a0c71e519412435728a 331 SMART SM00450 113 214 2.6E-20 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09185 564033e4ea657a0c71e519412435728a 331 Pfam PF00581 Rhodanese-like domain 115 210 1.1E-7 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_09185 564033e4ea657a0c71e519412435728a 331 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.911 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 AMBLS11_04920 36429dfdc18dcd7f3c71e810eb63f5e6 234 Pfam PF02348 Cytidylyltransferase 3 180 7.4E-34 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AMBLS11_04920 36429dfdc18dcd7f3c71e810eb63f5e6 234 Gene3D G3DSA:3.90.550.10 2 227 5.0E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04920 36429dfdc18dcd7f3c71e810eb63f5e6 234 SUPERFAMILY SSF53448 3 226 4.73E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04920 36429dfdc18dcd7f3c71e810eb63f5e6 234 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 226 1.1E-90 T 14-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 AMBLS11_14180 47b7d4e884e0f0acbc43b1747fa5823d 280 Pfam PF00924 Mechanosensitive ion channel 69 265 1.7E-55 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_14180 47b7d4e884e0f0acbc43b1747fa5823d 280 SUPERFAMILY SSF82861 25 109 1.29E-17 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMBLS11_14180 47b7d4e884e0f0acbc43b1747fa5823d 280 Gene3D G3DSA:3.30.70.100 177 270 2.7E-28 T 14-10-2018 AMBLS11_14180 47b7d4e884e0f0acbc43b1747fa5823d 280 SUPERFAMILY SSF50182 110 176 7.19E-17 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_14180 47b7d4e884e0f0acbc43b1747fa5823d 280 Gene3D G3DSA:2.30.30.60 126 175 1.7E-20 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_14180 47b7d4e884e0f0acbc43b1747fa5823d 280 SUPERFAMILY SSF82689 178 276 3.01E-34 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMBLS11_00770 8b9bce4cd222b0468f5e235bdfb46743 502 SUPERFAMILY SSF55073 351 500 3.14E-38 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_00770 8b9bce4cd222b0468f5e235bdfb46743 502 Gene3D G3DSA:3.30.70.270 332 501 3.3E-46 T 14-10-2018 AMBLS11_00770 8b9bce4cd222b0468f5e235bdfb46743 502 SMART SM00267 335 502 1.9E-40 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00770 8b9bce4cd222b0468f5e235bdfb46743 502 Pfam PF05231 MASE1 47 314 1.1E-10 T 14-10-2018 IPR007895 MASE1 AMBLS11_00770 8b9bce4cd222b0468f5e235bdfb46743 502 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 497 1.9E-36 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_00770 8b9bce4cd222b0468f5e235bdfb46743 502 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 500 6.7E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_17510 540c2f3622ae9da59fa434886270230c 224 Gene3D G3DSA:3.40.50.10610 24 189 1.4E-61 T 14-10-2018 AMBLS11_17510 540c2f3622ae9da59fa434886270230c 224 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 9 210 2.4E-86 T 14-10-2018 IPR008517 Protein of unknown function DUF799 AMBLS11_01945 d58b3c1e009b8f5ef684cc639acf2f69 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 488 8.5E-251 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AMBLS11_01945 d58b3c1e009b8f5ef684cc639acf2f69 489 Pfam PF00171 Aldehyde dehydrogenase family 11 462 1.8E-123 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMBLS11_01945 d58b3c1e009b8f5ef684cc639acf2f69 489 Gene3D G3DSA:3.40.309.10 249 440 3.7E-143 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMBLS11_01945 d58b3c1e009b8f5ef684cc639acf2f69 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 3 489 57.659 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AMBLS11_01945 d58b3c1e009b8f5ef684cc639acf2f69 489 Gene3D G3DSA:3.40.605.10 9 452 3.7E-143 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMBLS11_01945 d58b3c1e009b8f5ef684cc639acf2f69 489 SUPERFAMILY SSF53720 3 458 1.1E-125 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMBLS11_01945 d58b3c1e009b8f5ef684cc639acf2f69 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMBLS11_01945 d58b3c1e009b8f5ef684cc639acf2f69 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMBLS11_00060 bc465a109791213d5dd1bdf65085f135 207 Gene3D G3DSA:1.10.760.10 21 108 1.3E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_00060 bc465a109791213d5dd1bdf65085f135 207 PRINTS PR00605 Class IC cytochrome C signature 81 103 3.5E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMBLS11_00060 bc465a109791213d5dd1bdf65085f135 207 PRINTS PR00605 Class IC cytochrome C signature 32 43 3.5E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMBLS11_00060 bc465a109791213d5dd1bdf65085f135 207 Pfam PF00034 Cytochrome c 29 106 9.4E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_00060 bc465a109791213d5dd1bdf65085f135 207 Pfam PF00034 Cytochrome c 120 205 2.9E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_00060 bc465a109791213d5dd1bdf65085f135 207 Gene3D G3DSA:1.10.760.10 111 207 1.3E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_00060 bc465a109791213d5dd1bdf65085f135 207 SUPERFAMILY SSF46626 5 109 1.45E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_00060 bc465a109791213d5dd1bdf65085f135 207 PIRSF PIRSF000005 1 207 7.1E-65 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AMBLS11_00060 bc465a109791213d5dd1bdf65085f135 207 SUPERFAMILY SSF46626 117 205 4.36E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_17410 1c489ae156d54dfe34fec9444e943663 363 SUPERFAMILY SSF56281 96 323 5.42E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_17410 1c489ae156d54dfe34fec9444e943663 363 Gene3D G3DSA:3.60.15.10 74 363 6.9E-65 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_17410 1c489ae156d54dfe34fec9444e943663 363 SMART SM00849 101 308 0.003 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_17410 1c489ae156d54dfe34fec9444e943663 363 Pfam PF12706 Beta-lactamase superfamily domain 115 318 1.5E-31 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_07015 ae60299c6463840d3154a63c96cf8496 136 SUPERFAMILY SSF54197 7 134 1.72E-34 T 14-10-2018 IPR036265 HIT-like superfamily AMBLS11_07015 ae60299c6463840d3154a63c96cf8496 136 Gene3D G3DSA:3.30.428.10 1 135 3.2E-40 T 14-10-2018 IPR036265 HIT-like superfamily AMBLS11_07015 ae60299c6463840d3154a63c96cf8496 136 PIRSF PIRSF000714 1 136 7.3E-51 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type AMBLS11_07015 ae60299c6463840d3154a63c96cf8496 136 Pfam PF01230 HIT domain 9 97 4.1E-14 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMBLS11_13390 c589931f2ee1174b95be2c4aaba990de 307 PIRSF PIRSF029038 1 307 2.0E-119 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AMBLS11_13390 c589931f2ee1174b95be2c4aaba990de 307 Pfam PF05971 Protein of unknown function (DUF890) 3 307 1.4E-104 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AMBLS11_13390 c589931f2ee1174b95be2c4aaba990de 307 SUPERFAMILY SSF53335 24 307 2.87E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_13390 c589931f2ee1174b95be2c4aaba990de 307 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 1 307 44.256 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AMBLS11_01195 adcdcf09b1d613c61558124c77a061a8 278 SUPERFAMILY SSF53328 1 179 6.41E-27 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_01195 adcdcf09b1d613c61558124c77a061a8 278 Gene3D G3DSA:3.40.50.12230 1 268 1.6E-36 T 14-10-2018 AMBLS11_01195 adcdcf09b1d613c61558124c77a061a8 278 Pfam PF00551 Formyl transferase 64 156 1.4E-13 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMBLS11_17185 7ccbaafbfca140cc59e37570e0953e61 338 SMART SM00849 2 168 0.0052 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_17185 7ccbaafbfca140cc59e37570e0953e61 338 Pfam PF12706 Beta-lactamase superfamily domain 17 141 8.4E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMBLS11_17185 7ccbaafbfca140cc59e37570e0953e61 338 SUPERFAMILY SSF56281 11 323 5.37E-64 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_17185 7ccbaafbfca140cc59e37570e0953e61 338 Gene3D G3DSA:3.60.15.10 16 170 6.2E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_17185 7ccbaafbfca140cc59e37570e0953e61 338 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 6 333 5.1E-144 T 14-10-2018 IPR026360 Putative exonuclease, DNA ligase-associated AMBLS11_09965 a154bb7d98fbf3e3560bb2b267540c0f 154 PIRSF PIRSF000239 1 142 1.0E-18 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_09965 a154bb7d98fbf3e3560bb2b267540c0f 154 Gene3D G3DSA:3.40.30.10 3 154 5.8E-48 T 14-10-2018 AMBLS11_09965 a154bb7d98fbf3e3560bb2b267540c0f 154 Pfam PF00578 AhpC/TSA family 7 134 2.3E-39 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_09965 a154bb7d98fbf3e3560bb2b267540c0f 154 SUPERFAMILY SSF52833 4 153 2.47E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_09015 48127b0cfafaacae7be83b94e5d8269d 841 Gene3D G3DSA:1.10.439.10 57 225 2.3E-51 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 AMBLS11_09015 48127b0cfafaacae7be83b94e5d8269d 841 Gene3D G3DSA:1.10.1400.10 552 763 5.6E-177 T 14-10-2018 AMBLS11_09015 48127b0cfafaacae7be83b94e5d8269d 841 SUPERFAMILY SSF56235 58 838 1.18E-150 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_09015 48127b0cfafaacae7be83b94e5d8269d 841 Pfam PF01804 Penicillin amidase 64 829 1.7E-127 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AMBLS11_09015 48127b0cfafaacae7be83b94e5d8269d 841 Gene3D G3DSA:2.30.120.10 335 411 5.6E-177 T 14-10-2018 AMBLS11_09015 48127b0cfafaacae7be83b94e5d8269d 841 Gene3D G3DSA:3.60.20.10 259 828 5.6E-177 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMBLS11_04095 35b575fa154ee35ec359908bc02a2373 500 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 41 494 7.3E-91 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMBLS11_04095 35b575fa154ee35ec359908bc02a2373 500 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 446 462 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AMBLS11_04095 35b575fa154ee35ec359908bc02a2373 500 Pfam PF00939 Sodium:sulfate symporter transmembrane region 33 498 1.0E-88 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMBLS11_04980 638c81a11662e9ddb1f4a9a4f57ba909 772 PRINTS PR01007 Flagellar hook-length control protein signature 392 409 4.6E-7 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AMBLS11_04980 638c81a11662e9ddb1f4a9a4f57ba909 772 PRINTS PR01007 Flagellar hook-length control protein signature 655 673 4.6E-7 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AMBLS11_04980 638c81a11662e9ddb1f4a9a4f57ba909 772 PRINTS PR01007 Flagellar hook-length control protein signature 688 711 4.6E-7 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AMBLS11_04980 638c81a11662e9ddb1f4a9a4f57ba909 772 Gene3D G3DSA:3.30.750.140 623 732 2.8E-32 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily AMBLS11_04980 638c81a11662e9ddb1f4a9a4f57ba909 772 Pfam PF02120 Flagellar hook-length control protein FliK 640 722 2.9E-23 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AMBLS11_05710 7786ec6d58b76d11e3c12b7e8bebe24e 362 Pfam PF03116 NQR2, RnfD, RnfE family 5 351 3.5E-103 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AMBLS11_05710 7786ec6d58b76d11e3c12b7e8bebe24e 362 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 352 2.3E-127 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AMBLS11_05710 7786ec6d58b76d11e3c12b7e8bebe24e 362 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 353 26.629 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AMBLS11_09640 5535abd20b85ab9ada4af65c72001cb4 58 SUPERFAMILY SSF46955 2 53 1.83E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_09640 5535abd20b85ab9ada4af65c72001cb4 58 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 8.5E-24 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AMBLS11_09870 3209b798847706adecb657713d6d405c 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.4E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.4E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.4E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.7E-30 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 Gene3D G3DSA:4.10.520.10 40 91 5.5E-27 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 Gene3D G3DSA:4.10.520.10 2 39 4.4E-10 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.893 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 SMART SM00411 1 91 4.8E-42 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 SUPERFAMILY SSF47729 1 91 2.65E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 2.5E-47 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AMBLS11_09870 3209b798847706adecb657713d6d405c 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMBLS11_15700 433c58bc29be3b071017d93d53d12e84 373 SUPERFAMILY SSF50956 50 318 1.06E-11 T 14-10-2018 AMBLS11_16350 7f86084f41014dcdbe3aa99cdff43b52 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 1.4E-54 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16350 7f86084f41014dcdbe3aa99cdff43b52 130 SUPERFAMILY SSF53137 18 130 3.6E-47 T 14-10-2018 AMBLS11_16350 7f86084f41014dcdbe3aa99cdff43b52 130 Pfam PF00411 Ribosomal protein S11 20 129 2.2E-50 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMBLS11_16350 7f86084f41014dcdbe3aa99cdff43b52 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.74 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMBLS11_16350 7f86084f41014dcdbe3aa99cdff43b52 130 PIRSF PIRSF002131 1 130 7.8E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMBLS11_16350 7f86084f41014dcdbe3aa99cdff43b52 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site AMBLS11_16350 7f86084f41014dcdbe3aa99cdff43b52 130 Gene3D G3DSA:3.30.420.80 1 130 4.5E-56 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_09635 b2c25054218d25bb675d2be52f036282 156 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 104 109 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AMBLS11_09635 b2c25054218d25bb675d2be52f036282 156 SUPERFAMILY SSF102712 80 130 4.84E-5 T 14-10-2018 AMBLS11_09635 b2c25054218d25bb675d2be52f036282 156 Pfam PF04002 RadC-like JAB domain 35 153 1.6E-42 T 14-10-2018 IPR025657 RadC-like JAB domain AMBLS11_09635 b2c25054218d25bb675d2be52f036282 156 Gene3D G3DSA:3.40.140.10 32 154 9.1E-42 T 14-10-2018 AMBLS11_09635 b2c25054218d25bb675d2be52f036282 156 TIGRFAM TIGR00608 radc: DNA repair protein RadC 20 154 4.2E-41 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 AMBLS11_16565 7d52d93da1bdcb16e8d49912f6a30a24 542 Pfam PF03109 ABC1 family 114 229 9.3E-33 T 14-10-2018 IPR004147 UbiB domain AMBLS11_16565 7d52d93da1bdcb16e8d49912f6a30a24 542 SUPERFAMILY SSF56112 91 435 7.78E-50 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_16565 7d52d93da1bdcb16e8d49912f6a30a24 542 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 538 52.396 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AMBLS11_16565 7d52d93da1bdcb16e8d49912f6a30a24 542 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 443 2.8E-173 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AMBLS11_06680 f193108df5380dad5c46324d7610f540 161 Gene3D G3DSA:1.20.120.10 25 161 1.2E-33 T 14-10-2018 AMBLS11_06680 f193108df5380dad5c46324d7610f540 161 SUPERFAMILY SSF47175 36 159 4.27E-33 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMBLS11_06680 f193108df5380dad5c46324d7610f540 161 PIRSF PIRSF000027 16 161 9.8E-34 T 14-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 AMBLS11_06680 f193108df5380dad5c46324d7610f540 161 PRINTS PR00608 Class II cytochrome C signature 125 148 3.3E-7 T 14-10-2018 IPR015984 Cytochrome c prime, subgroup AMBLS11_06680 f193108df5380dad5c46324d7610f540 161 PRINTS PR00608 Class II cytochrome C signature 148 159 3.3E-7 T 14-10-2018 IPR015984 Cytochrome c prime, subgroup AMBLS11_06680 f193108df5380dad5c46324d7610f540 161 Pfam PF01322 Cytochrome C' 39 159 1.1E-31 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 AMBLS11_07715 26df4cdbd2a875e624387f03154912f8 303 SMART SM00267 133 289 2.6E-7 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07715 26df4cdbd2a875e624387f03154912f8 303 SUPERFAMILY SSF55073 157 271 6.59E-21 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07715 26df4cdbd2a875e624387f03154912f8 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 278 9.5E-23 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07715 26df4cdbd2a875e624387f03154912f8 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 270 4.6E-21 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07715 26df4cdbd2a875e624387f03154912f8 303 Gene3D G3DSA:3.30.70.270 137 302 7.0E-25 T 14-10-2018 AMBLS11_07045 556cd1fc7b73ed75071f4e48cfe3a23d 378 SUPERFAMILY SSF55031 181 291 8.67E-29 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMBLS11_07045 556cd1fc7b73ed75071f4e48cfe3a23d 378 Gene3D G3DSA:3.30.70.360 181 294 1.6E-124 T 14-10-2018 AMBLS11_07045 556cd1fc7b73ed75071f4e48cfe3a23d 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.212 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMBLS11_07045 556cd1fc7b73ed75071f4e48cfe3a23d 378 SUPERFAMILY SSF53187 4 376 1.07E-62 T 14-10-2018 AMBLS11_07045 556cd1fc7b73ed75071f4e48cfe3a23d 378 Gene3D G3DSA:3.40.630.10 10 364 1.6E-124 T 14-10-2018 AMBLS11_07045 556cd1fc7b73ed75071f4e48cfe3a23d 378 Pfam PF07687 Peptidase dimerisation domain 177 284 3.1E-22 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMBLS11_07045 556cd1fc7b73ed75071f4e48cfe3a23d 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 5.0E-44 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMBLS11_07045 556cd1fc7b73ed75071f4e48cfe3a23d 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 1.1E-166 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMBLS11_02690 eab7af076c2d62c94129e0c3980bcb50 234 Gene3D G3DSA:2.30.30.40 74 126 1.0E-8 T 14-10-2018 AMBLS11_02690 eab7af076c2d62c94129e0c3980bcb50 234 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 67 185 1.0E-37 T 14-10-2018 IPR016476 SH3 domain protein AMBLS11_02690 eab7af076c2d62c94129e0c3980bcb50 234 SMART SM00287 63 129 4.8E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type AMBLS11_02690 eab7af076c2d62c94129e0c3980bcb50 234 PIRSF PIRSF006158 35 234 2.0E-51 T 14-10-2018 IPR016476 SH3 domain protein AMBLS11_02690 eab7af076c2d62c94129e0c3980bcb50 234 Pfam PF08239 Bacterial SH3 domain 76 126 4.5E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type AMBLS11_01830 278e36cf4335aa07c0ea65e018d9b659 426 Gene3D G3DSA:1.10.101.10 356 418 4.9E-11 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMBLS11_01830 278e36cf4335aa07c0ea65e018d9b659 426 Pfam PF01471 Putative peptidoglycan binding domain 359 414 2.3E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like AMBLS11_01830 278e36cf4335aa07c0ea65e018d9b659 426 SUPERFAMILY SSF53955 33 344 2.25E-99 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMBLS11_01830 278e36cf4335aa07c0ea65e018d9b659 426 Gene3D G3DSA:1.10.530.10 90 338 2.4E-88 T 14-10-2018 AMBLS11_01830 278e36cf4335aa07c0ea65e018d9b659 426 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 47 343 3.2E-113 T 14-10-2018 IPR011970 Lytic murein transglycosylase AMBLS11_01830 278e36cf4335aa07c0ea65e018d9b659 426 SUPERFAMILY SSF47090 355 417 3.4E-14 T 14-10-2018 IPR036365 PGBD-like superfamily AMBLS11_01830 278e36cf4335aa07c0ea65e018d9b659 426 Pfam PF13406 Transglycosylase SLT domain 47 339 2.6E-107 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 AMBLS11_01830 278e36cf4335aa07c0ea65e018d9b659 426 Gene3D G3DSA:1.10.8.350 57 223 2.4E-88 T 14-10-2018 AMBLS11_00445 e99274cf8f990b24145b479de1bf8093 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 8.8E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_00445 e99274cf8f990b24145b479de1bf8093 307 Pfam PF03466 LysR substrate binding domain 100 297 1.0E-13 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_00445 e99274cf8f990b24145b479de1bf8093 307 Gene3D G3DSA:1.10.10.10 3 92 2.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_00445 e99274cf8f990b24145b479de1bf8093 307 Gene3D G3DSA:3.40.190.10 94 296 3.9E-44 T 14-10-2018 AMBLS11_00445 e99274cf8f990b24145b479de1bf8093 307 Gene3D G3DSA:3.40.190.10 175 271 3.9E-44 T 14-10-2018 AMBLS11_00445 e99274cf8f990b24145b479de1bf8093 307 SUPERFAMILY SSF53850 94 297 5.79E-30 T 14-10-2018 AMBLS11_00445 e99274cf8f990b24145b479de1bf8093 307 SUPERFAMILY SSF46785 9 90 2.4E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_10380 d2e08fb5cbbe91f1b32abbbed117026c 396 SUPERFAMILY SSF53383 3 393 1.44E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_10380 d2e08fb5cbbe91f1b32abbbed117026c 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.9E-30 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMBLS11_10380 d2e08fb5cbbe91f1b32abbbed117026c 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.9E-30 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMBLS11_10380 d2e08fb5cbbe91f1b32abbbed117026c 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.9E-30 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMBLS11_10380 d2e08fb5cbbe91f1b32abbbed117026c 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.9E-30 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMBLS11_10380 d2e08fb5cbbe91f1b32abbbed117026c 396 Gene3D G3DSA:3.40.640.10 60 300 9.3E-151 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_10380 d2e08fb5cbbe91f1b32abbbed117026c 396 Pfam PF00155 Aminotransferase class I and II 27 392 2.0E-72 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_10380 d2e08fb5cbbe91f1b32abbbed117026c 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AMBLS11_10380 d2e08fb5cbbe91f1b32abbbed117026c 396 Gene3D G3DSA:3.90.1150.10 6 392 9.3E-151 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_11470 8cf84fd7397e9e1c70dcde8c26b6059a 207 Pfam PF05036 Sporulation related domain 129 193 5.1E-12 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMBLS11_11470 8cf84fd7397e9e1c70dcde8c26b6059a 207 SUPERFAMILY SSF110997 127 199 4.18E-14 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMBLS11_11470 8cf84fd7397e9e1c70dcde8c26b6059a 207 Gene3D G3DSA:3.30.70.1070 123 199 3.7E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMBLS11_09130 9e0fec8b6e2d536fe011e1c744d36872 275 Pfam PF04397 LytTr DNA-binding domain 178 273 1.1E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_09130 9e0fec8b6e2d536fe011e1c744d36872 275 Pfam PF00072 Response regulator receiver domain 9 118 3.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_09130 9e0fec8b6e2d536fe011e1c744d36872 275 SUPERFAMILY SSF52172 8 138 1.99E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_09130 9e0fec8b6e2d536fe011e1c744d36872 275 Gene3D G3DSA:3.40.50.2300 1 139 2.7E-35 T 14-10-2018 AMBLS11_09130 9e0fec8b6e2d536fe011e1c744d36872 275 Gene3D G3DSA:2.40.50.40 168 237 4.1E-13 T 14-10-2018 AMBLS11_09130 9e0fec8b6e2d536fe011e1c744d36872 275 SMART SM00448 6 118 2.4E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_09130 9e0fec8b6e2d536fe011e1c744d36872 275 SMART SM00850 177 274 6.2E-32 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMBLS11_13610 bf5e8dad523c13d872381f3ea39e08f3 152 Gene3D G3DSA:2.40.70.10 22 149 1.7E-18 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_13610 bf5e8dad523c13d872381f3ea39e08f3 152 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 54 65 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMBLS11_13610 bf5e8dad523c13d872381f3ea39e08f3 152 SUPERFAMILY SSF50630 34 135 6.18E-8 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_13610 bf5e8dad523c13d872381f3ea39e08f3 152 Pfam PF13650 Aspartyl protease 44 130 4.2E-10 T 14-10-2018 AMBLS11_16250 c4ad4ac9ceeb5be5dddfe04783f95ce2 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 179 5.0E-70 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMBLS11_16250 c4ad4ac9ceeb5be5dddfe04783f95ce2 181 Gene3D G3DSA:2.60.120.10 1 180 3.0E-74 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_16250 c4ad4ac9ceeb5be5dddfe04783f95ce2 181 SUPERFAMILY SSF51182 1 178 2.72E-77 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_16250 c4ad4ac9ceeb5be5dddfe04783f95ce2 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 1.6E-82 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMBLS11_16250 c4ad4ac9ceeb5be5dddfe04783f95ce2 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 2.6E-73 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMBLS11_06770 0feb3cade6138ad09f33e66877c0a17f 360 SUPERFAMILY SSF52540 116 292 5.13E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06770 0feb3cade6138ad09f33e66877c0a17f 360 Gene3D G3DSA:3.40.50.300 114 320 5.5E-75 T 14-10-2018 AMBLS11_06770 0feb3cade6138ad09f33e66877c0a17f 360 Pfam PF02562 PhoH-like protein 117 320 1.0E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 AMBLS11_01855 a7e5faf75c66f750b8c16758c2f0dd24 546 Pfam PF02018 Carbohydrate binding domain 23 136 7.1E-6 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 AMBLS11_01855 a7e5faf75c66f750b8c16758c2f0dd24 546 Pfam PF04231 Endonuclease I 303 538 1.3E-102 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 AMBLS11_01855 a7e5faf75c66f750b8c16758c2f0dd24 546 SUPERFAMILY SSF54060 299 538 1.65E-45 T 14-10-2018 AMBLS11_01855 a7e5faf75c66f750b8c16758c2f0dd24 546 Gene3D G3DSA:2.60.120.260 23 167 5.3E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_01855 a7e5faf75c66f750b8c16758c2f0dd24 546 SUPERFAMILY SSF49785 24 162 1.05E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_11510 af2ff34667f02d560bd7ca58996ce073 229 SUPERFAMILY SSF46785 150 228 3.24E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_11510 af2ff34667f02d560bd7ca58996ce073 229 SUPERFAMILY SSF51206 7 141 4.58E-33 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMBLS11_11510 af2ff34667f02d560bd7ca58996ce073 229 Pfam PF13545 Crp-like helix-turn-helix domain 153 222 1.2E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMBLS11_11510 af2ff34667f02d560bd7ca58996ce073 229 SMART SM00419 170 218 9.2E-9 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMBLS11_11510 af2ff34667f02d560bd7ca58996ce073 229 Gene3D G3DSA:2.60.120.10 5 142 1.8E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_11510 af2ff34667f02d560bd7ca58996ce073 229 Pfam PF00027 Cyclic nucleotide-binding domain 32 119 1.0E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMBLS11_11510 af2ff34667f02d560bd7ca58996ce073 229 Gene3D G3DSA:1.10.10.10 149 225 3.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11510 af2ff34667f02d560bd7ca58996ce073 229 SMART SM00100 13 134 3.2E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMBLS11_18980 5838f90c38c818ad64fadc770cbf6684 211 PIRSF PIRSF003078 4 211 5.0E-63 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMBLS11_18980 5838f90c38c818ad64fadc770cbf6684 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 210 2.3E-57 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMBLS11_18980 5838f90c38c818ad64fadc770cbf6684 211 Gene3D G3DSA:3.40.50.150 9 211 9.9E-71 T 14-10-2018 AMBLS11_18980 5838f90c38c818ad64fadc770cbf6684 211 Pfam PF02527 rRNA small subunit methyltransferase G 26 206 2.8E-62 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMBLS11_18980 5838f90c38c818ad64fadc770cbf6684 211 SUPERFAMILY SSF53335 10 210 4.53E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_18980 5838f90c38c818ad64fadc770cbf6684 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 19 207 28.043 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMBLS11_04800 3b9d3ee28f08f6574041971d1d7b1179 476 Pfam PF07196 Flagellin hook IN motif 134 191 3.5E-10 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AMBLS11_04800 3b9d3ee28f08f6574041971d1d7b1179 476 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 230 467 8.7E-42 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 AMBLS11_04800 3b9d3ee28f08f6574041971d1d7b1179 476 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 110 4.4E-19 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AMBLS11_00180 563d0709482a43b9fccd2358363f4c82 1029 SUPERFAMILY SSF89550 10 67 5.89E-6 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMBLS11_00180 563d0709482a43b9fccd2358363f4c82 1029 Gene3D G3DSA:3.20.20.140 1 247 2.1E-35 T 14-10-2018 AMBLS11_00180 563d0709482a43b9fccd2358363f4c82 1029 Pfam PF02811 PHP domain 8 101 2.5E-8 T 14-10-2018 IPR004013 PHP domain GO:0003824 AMBLS11_00180 563d0709482a43b9fccd2358363f4c82 1029 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 973 1.1E-156 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00180 563d0709482a43b9fccd2358363f4c82 1029 Pfam PF01336 OB-fold nucleic acid binding domain 938 1010 1.2E-6 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMBLS11_00180 563d0709482a43b9fccd2358363f4c82 1029 Pfam PF14579 Helix-hairpin-helix motif 770 855 9.5E-16 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00180 563d0709482a43b9fccd2358363f4c82 1029 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 695 1.0E-143 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00180 563d0709482a43b9fccd2358363f4c82 1029 SMART SM00481 4 65 0.0014 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMBLS11_00180 563d0709482a43b9fccd2358363f4c82 1029 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1029 12.817 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_00765 7fc7499ff77e48a2d4c9cb6a5e13d7eb 268 Pfam PF06426 Serine acetyltransferase, N-terminal 11 113 2.4E-34 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMBLS11_00765 7fc7499ff77e48a2d4c9cb6a5e13d7eb 268 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 194 228 3.5E-9 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_00765 7fc7499ff77e48a2d4c9cb6a5e13d7eb 268 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 84 243 5.5E-70 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMBLS11_00765 7fc7499ff77e48a2d4c9cb6a5e13d7eb 268 SUPERFAMILY SSF51161 10 247 1.15E-61 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_00765 7fc7499ff77e48a2d4c9cb6a5e13d7eb 268 PIRSF PIRSF000441 76 267 6.0E-60 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMBLS11_00765 7fc7499ff77e48a2d4c9cb6a5e13d7eb 268 SMART SM00971 10 114 6.4E-52 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMBLS11_00765 7fc7499ff77e48a2d4c9cb6a5e13d7eb 268 Gene3D G3DSA:2.160.10.10 144 265 5.7E-36 T 14-10-2018 AMBLS11_00765 7fc7499ff77e48a2d4c9cb6a5e13d7eb 268 Gene3D G3DSA:1.10.3130.10 2 143 1.3E-48 T 14-10-2018 AMBLS11_00765 7fc7499ff77e48a2d4c9cb6a5e13d7eb 268 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 203 231 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMBLS11_16130 c3dc2c48170b3af2067238111bfee0ac 229 SUPERFAMILY SSF55874 111 228 8.38E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16130 c3dc2c48170b3af2067238111bfee0ac 229 Pfam PF07730 Histidine kinase 43 100 6.7E-9 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMBLS11_16130 c3dc2c48170b3af2067238111bfee0ac 229 SMART SM00387 139 229 2.7E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16130 c3dc2c48170b3af2067238111bfee0ac 229 Gene3D G3DSA:3.30.565.10 99 229 1.0E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_16130 c3dc2c48170b3af2067238111bfee0ac 229 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 142 228 1.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_16130 c3dc2c48170b3af2067238111bfee0ac 229 PRINTS PR00344 Bacterial sensor protein C-terminal signature 191 209 3.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16130 c3dc2c48170b3af2067238111bfee0ac 229 PRINTS PR00344 Bacterial sensor protein C-terminal signature 215 228 3.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_16130 c3dc2c48170b3af2067238111bfee0ac 229 PRINTS PR00344 Bacterial sensor protein C-terminal signature 175 189 3.6E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_18320 d521005481910561c322acfad455fd7c 194 SUPERFAMILY SSF101874 22 193 1.7E-24 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMBLS11_18320 d521005481910561c322acfad455fd7c 194 SMART SM00867 25 193 5.2E-20 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMBLS11_18320 d521005481910561c322acfad455fd7c 194 Pfam PF04264 YceI-like domain 26 192 8.4E-15 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMBLS11_18320 d521005481910561c322acfad455fd7c 194 PIRSF PIRSF029811 1 194 1.1E-58 T 14-10-2018 IPR027016 Uncharacterised protein with YceI domain AMBLS11_18320 d521005481910561c322acfad455fd7c 194 Gene3D G3DSA:2.40.128.110 22 194 8.1E-52 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMBLS11_06390 2f06ad3671f7604ff7fdc4cd86da7eea 218 SUPERFAMILY SSF51735 3 133 1.58E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_06390 2f06ad3671f7604ff7fdc4cd86da7eea 218 Pfam PF02254 TrkA-N domain 6 119 1.5E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMBLS11_06390 2f06ad3671f7604ff7fdc4cd86da7eea 218 SUPERFAMILY SSF116726 131 213 1.09E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_06390 2f06ad3671f7604ff7fdc4cd86da7eea 218 Gene3D G3DSA:3.30.70.1450 138 213 2.1E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_06390 2f06ad3671f7604ff7fdc4cd86da7eea 218 Gene3D G3DSA:3.40.50.720 1 137 4.3E-31 T 14-10-2018 AMBLS11_07110 90fdc399a17765f521b18bf86ee53c64 641 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 302 2.2E-73 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AMBLS11_07110 90fdc399a17765f521b18bf86ee53c64 641 Pfam PF00999 Sodium/hydrogen exchanger family 10 389 5.1E-59 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMBLS11_07110 90fdc399a17765f521b18bf86ee53c64 641 Gene3D G3DSA:1.20.1530.20 2 398 1.1E-75 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMBLS11_07110 90fdc399a17765f521b18bf86ee53c64 641 Gene3D G3DSA:3.40.50.720 419 577 1.1E-35 T 14-10-2018 AMBLS11_07110 90fdc399a17765f521b18bf86ee53c64 641 SUPERFAMILY SSF51735 418 561 2.04E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_07110 90fdc399a17765f521b18bf86ee53c64 641 Pfam PF02254 TrkA-N domain 421 535 1.5E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMBLS11_01075 930d208ddd554b2e0e0955f788fe3037 474 Pfam PF08323 Starch synthase catalytic domain 2 232 7.6E-64 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AMBLS11_01075 930d208ddd554b2e0e0955f788fe3037 474 Pfam PF00534 Glycosyl transferases group 1 284 434 4.5E-14 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_01075 930d208ddd554b2e0e0955f788fe3037 474 Hamap MF_00484 Glycogen synthase [glgA]. 1 472 39.766 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AMBLS11_01075 930d208ddd554b2e0e0955f788fe3037 474 Gene3D G3DSA:3.40.50.2000 248 454 2.5E-163 T 14-10-2018 AMBLS11_01075 930d208ddd554b2e0e0955f788fe3037 474 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 2 471 1.4E-156 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AMBLS11_01075 930d208ddd554b2e0e0955f788fe3037 474 SUPERFAMILY SSF53756 4 474 1.01E-112 T 14-10-2018 AMBLS11_01075 930d208ddd554b2e0e0955f788fe3037 474 Gene3D G3DSA:3.40.50.2000 3 469 2.5E-163 T 14-10-2018 AMBLS11_15955 4cdf74bf961009f2fd604ef3a9e9723c 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 4 107 1.8E-25 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AMBLS11_15955 4cdf74bf961009f2fd604ef3a9e9723c 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 115 202 2.8E-28 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMBLS11_15955 4cdf74bf961009f2fd604ef3a9e9723c 206 Gene3D G3DSA:1.10.287.460 3 66 4.9E-20 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AMBLS11_15955 4cdf74bf961009f2fd604ef3a9e9723c 206 Gene3D G3DSA:3.10.50.40 67 205 3.0E-53 T 14-10-2018 AMBLS11_15955 4cdf74bf961009f2fd604ef3a9e9723c 206 SUPERFAMILY SSF54534 6 204 4.91E-57 T 14-10-2018 AMBLS11_17880 3ff43c55ad5ef962134966df497aa874 775 Gene3D G3DSA:2.170.130.10 38 165 7.2E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_17880 3ff43c55ad5ef962134966df497aa874 775 Pfam PF00593 TonB dependent receptor 260 774 3.7E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_17880 3ff43c55ad5ef962134966df497aa874 775 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 150 3.7E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_17880 3ff43c55ad5ef962134966df497aa874 775 Gene3D G3DSA:2.40.170.20 170 775 6.1E-99 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_17880 3ff43c55ad5ef962134966df497aa874 775 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 32 775 2.2E-102 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AMBLS11_17880 3ff43c55ad5ef962134966df497aa874 775 SUPERFAMILY SSF56935 39 775 9.16E-84 T 14-10-2018 AMBLS11_08290 1a18c88c1dedf54f1b7ef30c04c07d37 303 SUPERFAMILY SSF48452 149 280 2.09E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_08290 1a18c88c1dedf54f1b7ef30c04c07d37 303 Gene3D G3DSA:1.25.40.10 30 282 1.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_14325 923d47a02cc27fd5bffb700d213a3705 427 Pfam PF14821 Threonine synthase N terminus 8 78 4.4E-11 T 14-10-2018 IPR029144 Threonine synthase, N-terminal AMBLS11_14325 923d47a02cc27fd5bffb700d213a3705 427 Gene3D G3DSA:3.90.1380.10 1 79 2.4E-24 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily AMBLS11_14325 923d47a02cc27fd5bffb700d213a3705 427 Gene3D G3DSA:3.40.50.1100 83 392 3.2E-134 T 14-10-2018 AMBLS11_14325 923d47a02cc27fd5bffb700d213a3705 427 SUPERFAMILY SSF53686 3 426 9.04E-125 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMBLS11_14325 923d47a02cc27fd5bffb700d213a3705 427 Gene3D G3DSA:3.40.50.1100 101 399 3.2E-134 T 14-10-2018 AMBLS11_14325 923d47a02cc27fd5bffb700d213a3705 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 367 1.1E-25 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMBLS11_14325 923d47a02cc27fd5bffb700d213a3705 427 TIGRFAM TIGR00260 thrC: threonine synthase 55 391 5.7E-110 T 14-10-2018 IPR004450 Threonine synthase-like AMBLS11_14325 923d47a02cc27fd5bffb700d213a3705 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMBLS11_07370 73f94f5b8319d5144a704d5210aea02d 469 Pfam PF04932 O-Antigen ligase 249 392 2.8E-17 T 14-10-2018 IPR007016 O-antigen ligase-related AMBLS11_13305 cb16279db639a476c102cdd79c9e6e74 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 3.1E-85 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AMBLS11_13305 cb16279db639a476c102cdd79c9e6e74 209 Gene3D G3DSA:3.40.50.2020 1 209 2.6E-72 T 14-10-2018 AMBLS11_13305 cb16279db639a476c102cdd79c9e6e74 209 SUPERFAMILY SSF53271 3 207 5.38E-65 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMBLS11_13305 cb16279db639a476c102cdd79c9e6e74 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 209 42.987 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AMBLS11_13305 cb16279db639a476c102cdd79c9e6e74 209 Pfam PF14681 Uracil phosphoribosyltransferase 7 208 3.3E-67 T 14-10-2018 AMBLS11_00280 9ef4ed01c4530b79c3228a0a68734687 157 SUPERFAMILY SSF53850 39 145 3.8E-16 T 14-10-2018 AMBLS11_00280 9ef4ed01c4530b79c3228a0a68734687 157 Gene3D G3DSA:3.40.190.10 39 155 4.9E-13 T 14-10-2018 AMBLS11_00395 3ac73b9de790702a3032e6dfc687f11f 599 Pfam PF09369 Domain of unknown function (DUF1998) 460 557 5.7E-7 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 64 5.0E-37 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 PIRSF PIRSF002599 1 71 5.3E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 PRINTS PR00050 Cold shock protein signature 4 19 6.8E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 PRINTS PR00050 Cold shock protein signature 40 58 6.8E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 PRINTS PR00050 Cold shock protein signature 25 34 6.8E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 SUPERFAMILY SSF50249 1 64 1.78E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 Pfam PF00313 'Cold-shock' DNA-binding domain 4 64 7.1E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 SMART SM00357 3 67 1.9E-25 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMBLS11_08365 05752f288623a716c08e43bfce3e1660 72 Gene3D G3DSA:2.40.50.140 2 65 2.4E-28 T 14-10-2018 AMBLS11_17130 9b3af3c4c80c9d967990bd695011bf3b 649 Pfam PF16657 Maltogenic Amylase, C-terminal domain 571 645 8.9E-7 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal AMBLS11_17130 9b3af3c4c80c9d967990bd695011bf3b 649 Pfam PF00128 Alpha amylase, catalytic domain 112 317 1.8E-36 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_17130 9b3af3c4c80c9d967990bd695011bf3b 649 SMART SM00642 97 528 1.7E-21 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_17130 9b3af3c4c80c9d967990bd695011bf3b 649 Gene3D G3DSA:3.20.20.80 99 562 5.2E-195 T 14-10-2018 AMBLS11_17130 9b3af3c4c80c9d967990bd695011bf3b 649 Gene3D G3DSA:3.90.400.10 186 261 5.2E-195 T 14-10-2018 AMBLS11_17130 9b3af3c4c80c9d967990bd695011bf3b 649 Gene3D G3DSA:1.10.1740.10 10 96 4.0E-20 T 14-10-2018 AMBLS11_17130 9b3af3c4c80c9d967990bd695011bf3b 649 Gene3D G3DSA:2.60.40.1180 573 648 4.6E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_17130 9b3af3c4c80c9d967990bd695011bf3b 649 SUPERFAMILY SSF51445 23 567 4.61E-110 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_17130 9b3af3c4c80c9d967990bd695011bf3b 649 SUPERFAMILY SSF51011 573 646 2.38E-9 T 14-10-2018 AMBLS11_15930 d3137931571e15182d9a38ceec22be57 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 195 1.1E-58 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMBLS11_15930 d3137931571e15182d9a38ceec22be57 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 35.764 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AMBLS11_15930 d3137931571e15182d9a38ceec22be57 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 2.9E-99 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AMBLS11_15930 d3137931571e15182d9a38ceec22be57 210 PIRSF PIRSF006102 3 210 9.6E-68 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMBLS11_05315 f135b5a2d5cf50d51ee9e1e0b8331fee 184 Gene3D G3DSA:2.60.120.620 3 182 1.7E-14 T 14-10-2018 AMBLS11_05315 f135b5a2d5cf50d51ee9e1e0b8331fee 184 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 95 177 1.5E-8 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMBLS11_16860 c5603eb8e905f3adf778f88f3a435165 225 Pfam PF02390 Putative methyltransferase 60 217 3.6E-11 T 14-10-2018 AMBLS11_16860 c5603eb8e905f3adf778f88f3a435165 225 SUPERFAMILY SSF53335 28 121 2.69E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_16860 c5603eb8e905f3adf778f88f3a435165 225 Gene3D G3DSA:3.40.50.150 21 221 6.0E-28 T 14-10-2018 AMBLS11_03790 eed1f5050f8ac6e072c197ae8aa4413f 139 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 88 99 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AMBLS11_03790 eed1f5050f8ac6e072c197ae8aa4413f 139 Gene3D G3DSA:1.10.3830.10 20 139 3.7E-32 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AMBLS11_03790 eed1f5050f8ac6e072c197ae8aa4413f 139 Pfam PF01219 Prokaryotic diacylglycerol kinase 34 135 4.5E-26 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AMBLS11_04285 2642859c2904701f4d161c163f83532c 273 SMART SM00382 46 229 7.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_04285 2642859c2904701f4d161c163f83532c 273 Gene3D G3DSA:3.40.50.300 10 246 8.4E-64 T 14-10-2018 AMBLS11_04285 2642859c2904701f4d161c163f83532c 273 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_04285 2642859c2904701f4d161c163f83532c 273 Pfam PF00005 ABC transporter 38 180 2.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_04285 2642859c2904701f4d161c163f83532c 273 SUPERFAMILY SSF52540 33 237 5.33E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_07230 71493236f977d9ecbaf2504164b6ae67 525 Pfam PF00860 Permease family 22 408 4.4E-79 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMBLS11_07230 71493236f977d9ecbaf2504164b6ae67 525 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 437 3.3E-100 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMBLS11_07230 71493236f977d9ecbaf2504164b6ae67 525 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 356 376 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AMBLS11_05205 24f79965d7145801701baf53802ffd1b 331 Pfam PF00005 ABC transporter 23 187 1.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_05205 24f79965d7145801701baf53802ffd1b 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 6.8E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMBLS11_05205 24f79965d7145801701baf53802ffd1b 331 SUPERFAMILY SSF52540 2 259 3.15E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05205 24f79965d7145801701baf53802ffd1b 331 Gene3D G3DSA:3.40.50.300 2 330 3.5E-66 T 14-10-2018 AMBLS11_05205 24f79965d7145801701baf53802ffd1b 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 306 1.4E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMBLS11_05205 24f79965d7145801701baf53802ffd1b 331 SMART SM00382 32 239 3.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_01775 7df267c17ab5876357ceec802d63ed8e 436 SUPERFAMILY SSF53756 75 421 1.99E-10 T 14-10-2018 AMBLS11_01775 7df267c17ab5876357ceec802d63ed8e 436 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 53 228 5.9E-54 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AMBLS11_01775 7df267c17ab5876357ceec802d63ed8e 436 Gene3D G3DSA:3.40.50.2000 241 419 2.7E-59 T 14-10-2018 AMBLS11_01775 7df267c17ab5876357ceec802d63ed8e 436 Gene3D G3DSA:3.40.50.11720 49 226 1.6E-37 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AMBLS11_12870 4abfae12fc718f6821071783500b2825 372 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 351 73.421 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AMBLS11_12870 4abfae12fc718f6821071783500b2825 372 Gene3D G3DSA:1.10.150.530 3 64 1.7E-26 T 14-10-2018 AMBLS11_12870 4abfae12fc718f6821071783500b2825 372 Gene3D G3DSA:3.20.20.70 65 336 1.3E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_12870 4abfae12fc718f6821071783500b2825 372 Pfam PF04055 Radical SAM superfamily 107 276 6.2E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_12870 4abfae12fc718f6821071783500b2825 372 PIRSF PIRSF006004 2 365 5.8E-143 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 AMBLS11_12870 4abfae12fc718f6821071783500b2825 372 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 355 9.3E-156 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AMBLS11_12870 4abfae12fc718f6821071783500b2825 372 SUPERFAMILY SSF102114 103 311 4.84E-14 T 14-10-2018 AMBLS11_04485 c80a3fd45d57cd46ad93dbb3f4858327 180 Gene3D G3DSA:3.40.1580.20 1 180 1.8E-65 T 14-10-2018 IPR038228 Syd superfamily AMBLS11_04485 c80a3fd45d57cd46ad93dbb3f4858327 180 Hamap MF_01104 Protein Syd [syd]. 3 180 31.666 T 14-10-2018 IPR009948 Syd GO:0009898 AMBLS11_04485 c80a3fd45d57cd46ad93dbb3f4858327 180 Pfam PF07348 Syd protein (SUKH-2) 7 178 2.9E-61 T 14-10-2018 IPR009948 Syd GO:0009898 AMBLS11_11985 eb9ee3bbaab1aadff70bdd6fbe463f18 128 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 18 116 4.0E-11 T 14-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AMBLS11_11985 eb9ee3bbaab1aadff70bdd6fbe463f18 128 Pfam PF03203 MerC mercury resistance protein 6 116 6.5E-11 T 14-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AMBLS11_12100 c61ac335307cfff656b089d0769e39d9 247 Gene3D G3DSA:2.60.120.10 135 226 1.2E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_12100 c61ac335307cfff656b089d0769e39d9 247 Gene3D G3DSA:1.10.10.1320 1 134 4.4E-12 T 14-10-2018 AMBLS11_12100 c61ac335307cfff656b089d0769e39d9 247 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 5 243 7.5E-45 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative AMBLS11_12100 c61ac335307cfff656b089d0769e39d9 247 Pfam PF12973 ChrR Cupin-like domain 141 221 4.0E-12 T 14-10-2018 IPR025979 ChrR-like cupin domain AMBLS11_12100 c61ac335307cfff656b089d0769e39d9 247 SUPERFAMILY SSF51182 142 231 3.26E-13 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_01940 bdc91c5ec782be4ab443ecf666a29a59 268 Pfam PF07063 Domain of unknown function (DUF1338) 7 122 7.7E-24 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 AMBLS11_01940 bdc91c5ec782be4ab443ecf666a29a59 268 Pfam PF07063 Domain of unknown function (DUF1338) 137 265 1.1E-25 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 AMBLS11_01940 bdc91c5ec782be4ab443ecf666a29a59 268 Gene3D G3DSA:3.10.180.50 2 243 7.1E-93 T 14-10-2018 AMBLS11_01940 bdc91c5ec782be4ab443ecf666a29a59 268 SMART SM01150 5 266 5.3E-111 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 AMBLS11_12665 06d2ff38175f9244d62eb3aa856a2a31 306 Gene3D G3DSA:2.40.30.30 188 306 1.6E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AMBLS11_12665 06d2ff38175f9244d62eb3aa856a2a31 306 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 8.0E-100 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMBLS11_12665 06d2ff38175f9244d62eb3aa856a2a31 306 Pfam PF06574 FAD synthetase 12 167 9.1E-58 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMBLS11_12665 06d2ff38175f9244d62eb3aa856a2a31 306 SUPERFAMILY SSF52374 15 175 3.66E-35 T 14-10-2018 AMBLS11_12665 06d2ff38175f9244d62eb3aa856a2a31 306 Gene3D G3DSA:3.40.50.620 1 186 2.9E-61 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_12665 06d2ff38175f9244d62eb3aa856a2a31 306 SMART SM00904 183 306 3.0E-61 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AMBLS11_12665 06d2ff38175f9244d62eb3aa856a2a31 306 PIRSF PIRSF004491 2 306 5.8E-105 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMBLS11_12665 06d2ff38175f9244d62eb3aa856a2a31 306 SUPERFAMILY SSF82114 174 305 4.8E-44 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AMBLS11_12665 06d2ff38175f9244d62eb3aa856a2a31 306 Pfam PF01687 Riboflavin kinase 184 303 6.5E-36 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AMBLS11_13155 36a4d7ad304a904778fca1d02261c18b 309 SUPERFAMILY SSF53448 4 231 2.89E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_13155 36a4d7ad304a904778fca1d02261c18b 309 Gene3D G3DSA:3.90.550.10 1 219 7.5E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_13155 36a4d7ad304a904778fca1d02261c18b 309 Pfam PF00535 Glycosyl transferase family 2 6 171 3.3E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_16080 dbeafdf3190847cece13d295c6d81679 329 SUPERFAMILY SSF53850 93 264 2.35E-9 T 14-10-2018 AMBLS11_16080 dbeafdf3190847cece13d295c6d81679 329 Gene3D G3DSA:3.40.190.10 134 230 5.0E-6 T 14-10-2018 AMBLS11_16080 dbeafdf3190847cece13d295c6d81679 329 Gene3D G3DSA:3.40.190.10 91 264 5.0E-6 T 14-10-2018 AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 Gene3D G3DSA:3.40.50.720 1 254 2.1E-88 T 14-10-2018 AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.0E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.0E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.0E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 253 3.1E-69 T 14-10-2018 AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10405 2d59d7cdabd4ba226ba0c311b30a8510 255 SUPERFAMILY SSF51735 8 254 8.49E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_18785 ea8e6ebcd3bdd2571c76111d882fccd7 197 Pfam PF06938 Protein of unknown function (DUF1285) 36 187 4.4E-47 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 AMBLS11_18785 ea8e6ebcd3bdd2571c76111d882fccd7 197 Gene3D G3DSA:3.10.540.10 2 86 9.1E-34 T 14-10-2018 AMBLS11_18785 ea8e6ebcd3bdd2571c76111d882fccd7 197 PIRSF PIRSF029557 2 197 1.2E-55 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 AMBLS11_18785 ea8e6ebcd3bdd2571c76111d882fccd7 197 Gene3D G3DSA:2.30.270.10 87 163 1.9E-10 T 14-10-2018 IPR023361 DUF1285, beta-roll domain superfamily AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 SMART SM00173 1 160 9.0E-8 T 14-10-2018 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 SMART SM00174 6 161 0.0084 T 14-10-2018 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 PRINTS PR00449 Transforming protein P21 ras signature 27 43 5.3E-23 T 14-10-2018 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 PRINTS PR00449 Transforming protein P21 ras signature 106 119 5.3E-23 T 14-10-2018 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 PRINTS PR00449 Transforming protein P21 ras signature 140 161 5.3E-23 T 14-10-2018 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 PRINTS PR00449 Transforming protein P21 ras signature 4 25 5.3E-23 T 14-10-2018 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 PRINTS PR00449 Transforming protein P21 ras signature 45 67 5.3E-23 T 14-10-2018 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 SMART SM00175 5 159 5.9E-11 T 14-10-2018 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 SUPERFAMILY SSF52540 4 159 5.72E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 Pfam PF00071 Ras family 5 159 1.5E-29 T 14-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 Gene3D G3DSA:3.40.50.300 2 160 7.2E-43 T 14-10-2018 AMBLS11_15635 c4d01bf6d21544dee62a6d55f98d1b4b 161 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 1.7E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 1.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.8E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 9.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 9.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 9.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 261 6.7E-56 T 14-10-2018 AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 Gene3D G3DSA:3.40.50.720 3 263 2.9E-71 T 14-10-2018 AMBLS11_03065 67caba269ab227a86988fc10fcae5017 263 SUPERFAMILY SSF51735 21 262 8.24E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_08490 c3dc774804716a3153315aac19cfcdce 177 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 167 25.131 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AMBLS11_08490 c3dc774804716a3153315aac19cfcdce 177 Gene3D G3DSA:3.30.160.150 17 171 6.1E-48 T 14-10-2018 AMBLS11_08490 c3dc774804716a3153315aac19cfcdce 177 Pfam PF04390 Lipopolysaccharide-assembly 36 162 6.7E-12 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AMBLS11_10670 d32f2b4ff59c4250665075cbad81189e 157 Gene3D G3DSA:3.90.1170.40 3 153 1.4E-40 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMBLS11_10670 d32f2b4ff59c4250665075cbad81189e 157 SUPERFAMILY SSF54690 5 153 2.48E-43 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMBLS11_10670 d32f2b4ff59c4250665075cbad81189e 157 Pfam PF02391 MoaE protein 17 123 3.9E-28 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMBLS11_10340 d080d79a030aa2eea960dfd78cfdc804 194 Gene3D G3DSA:1.20.1540.10 9 194 9.4E-13 T 14-10-2018 IPR035952 Rhomboid-like superfamily AMBLS11_10340 d080d79a030aa2eea960dfd78cfdc804 194 Pfam PF01694 Rhomboid family 43 188 2.6E-8 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMBLS11_10340 d080d79a030aa2eea960dfd78cfdc804 194 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 33 184 1.6E-53 T 14-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria AMBLS11_10340 d080d79a030aa2eea960dfd78cfdc804 194 SUPERFAMILY SSF144091 21 191 6.28E-25 T 14-10-2018 AMBLS11_09755 5ea24b8b03035024c92b11653ccbcc6e 163 Gene3D G3DSA:3.10.450.50 27 156 3.8E-5 T 14-10-2018 AMBLS11_09755 5ea24b8b03035024c92b11653ccbcc6e 163 SUPERFAMILY SSF54427 57 152 1.38E-5 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_10420 0c2d995fafd67936afd978a7fee76438 748 Gene3D G3DSA:2.40.170.20 42 748 4.3E-137 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_10420 0c2d995fafd67936afd978a7fee76438 748 Pfam PF00593 TonB dependent receptor 266 746 7.4E-40 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_10420 0c2d995fafd67936afd978a7fee76438 748 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 160 1.6E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_10420 0c2d995fafd67936afd978a7fee76438 748 SUPERFAMILY SSF56935 27 747 3.46E-113 T 14-10-2018 AMBLS11_16150 1def4549fd15a4ac1d01f1ae1a95446c 205 SUPERFAMILY SSF48403 54 201 1.78E-36 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMBLS11_16150 1def4549fd15a4ac1d01f1ae1a95446c 205 SMART SM00248 113 142 0.095 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMBLS11_16150 1def4549fd15a4ac1d01f1ae1a95446c 205 SMART SM00248 146 175 0.11 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMBLS11_16150 1def4549fd15a4ac1d01f1ae1a95446c 205 SMART SM00248 46 75 4500.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMBLS11_16150 1def4549fd15a4ac1d01f1ae1a95446c 205 SMART SM00248 79 109 0.02 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMBLS11_16150 1def4549fd15a4ac1d01f1ae1a95446c 205 Gene3D G3DSA:1.25.40.20 17 205 4.3E-43 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMBLS11_16150 1def4549fd15a4ac1d01f1ae1a95446c 205 Pfam PF12796 Ankyrin repeats (3 copies) 54 142 2.6E-13 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain AMBLS11_16150 1def4549fd15a4ac1d01f1ae1a95446c 205 Pfam PF13637 Ankyrin repeats (many copies) 149 199 2.8E-5 T 14-10-2018 AMBLS11_00965 c5e3cc7ef94e89636ed57c0621706d9a 885 Pfam PF00593 TonB dependent receptor 407 883 9.6E-36 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_00965 c5e3cc7ef94e89636ed57c0621706d9a 885 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 884 3.2E-183 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_00965 c5e3cc7ef94e89636ed57c0621706d9a 885 Gene3D G3DSA:2.170.130.10 43 166 2.7E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_00965 c5e3cc7ef94e89636ed57c0621706d9a 885 SUPERFAMILY SSF56935 36 883 7.33E-87 T 14-10-2018 AMBLS11_00965 c5e3cc7ef94e89636ed57c0621706d9a 885 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 154 1.3E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_05840 74d91c636f81322713621434bec12382 358 Gene3D G3DSA:3.40.50.410 87 288 2.9E-56 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMBLS11_05840 74d91c636f81322713621434bec12382 358 Pfam PF00092 von Willebrand factor type A domain 90 282 2.7E-27 T 14-10-2018 IPR002035 von Willebrand factor, type A AMBLS11_05840 74d91c636f81322713621434bec12382 358 SMART SM00327 87 256 4.3E-19 T 14-10-2018 IPR002035 von Willebrand factor, type A AMBLS11_05840 74d91c636f81322713621434bec12382 358 SUPERFAMILY SSF53300 84 265 4.6E-40 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMBLS11_17210 de9c057dd28a98651668ca4ec8c203a1 659 SUPERFAMILY SSF53474 401 658 4.9E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_17210 de9c057dd28a98651668ca4ec8c203a1 659 SUPERFAMILY SSF82171 32 393 6.67E-11 T 14-10-2018 AMBLS11_17210 de9c057dd28a98651668ca4ec8c203a1 659 Pfam PF00326 Prolyl oligopeptidase family 449 658 2.3E-49 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_17210 de9c057dd28a98651668ca4ec8c203a1 659 Gene3D G3DSA:3.40.50.1820 388 659 2.5E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_01115 3c1d3a2bfaf36352640e37514dff6fcf 934 Pfam PF13289 SIR2-like domain 105 237 1.0E-22 T 14-10-2018 IPR039444 SIR2-like domain AMBLS11_01115 3c1d3a2bfaf36352640e37514dff6fcf 934 SUPERFAMILY SSF52467 15 221 1.53E-10 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMBLS11_09075 3b05afbd124748aa42dc11747f595475 224 SUPERFAMILY SSF53335 36 193 2.71E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_09075 3b05afbd124748aa42dc11747f595475 224 Pfam PF13847 Methyltransferase domain 37 151 1.3E-7 T 14-10-2018 IPR025714 Methyltransferase domain AMBLS11_09075 3b05afbd124748aa42dc11747f595475 224 Gene3D G3DSA:3.40.50.150 2 223 9.2E-36 T 14-10-2018 AMBLS11_06655 2718bcf800263274f8f9df6b54aa23c1 296 SUPERFAMILY SSF50630 30 127 2.32E-8 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_06655 2718bcf800263274f8f9df6b54aa23c1 296 Gene3D G3DSA:2.40.70.10 17 149 9.8E-14 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_06655 2718bcf800263274f8f9df6b54aa23c1 296 Gene3D G3DSA:2.40.70.10 164 295 9.2E-15 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_06655 2718bcf800263274f8f9df6b54aa23c1 296 Pfam PF13650 Aspartyl protease 169 274 2.6E-9 T 14-10-2018 AMBLS11_02205 851df60c8329e44447f65d14d6c30974 315 Pfam PF02666 Phosphatidylserine decarboxylase 63 280 4.7E-60 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AMBLS11_02205 851df60c8329e44447f65d14d6c30974 315 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 285 44.377 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AMBLS11_02205 851df60c8329e44447f65d14d6c30974 315 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 284 6.2E-79 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AMBLS11_01600 805b9efc5c148c56f1f27b8e264afddd 412 SUPERFAMILY SSF103473 3 401 4.19E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_01600 805b9efc5c148c56f1f27b8e264afddd 412 Pfam PF07690 Major Facilitator Superfamily 10 301 3.9E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_01600 805b9efc5c148c56f1f27b8e264afddd 412 Gene3D G3DSA:1.20.1250.20 3 196 5.4E-16 T 14-10-2018 AMBLS11_01600 805b9efc5c148c56f1f27b8e264afddd 412 Gene3D G3DSA:1.20.1250.20 202 404 1.1E-29 T 14-10-2018 AMBLS11_13135 7c33ade9d10bdf6fd65f7a145d05db0c 479 Pfam PF13440 Polysaccharide biosynthesis protein 33 320 5.2E-58 T 14-10-2018 AMBLS11_13135 7c33ade9d10bdf6fd65f7a145d05db0c 479 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 322 460 1.5E-13 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMBLS11_04615 ad822b2b48da96d3c318699c04a76bfa 382 SUPERFAMILY SSF53756 6 316 1.53E-33 T 14-10-2018 AMBLS11_04615 ad822b2b48da96d3c318699c04a76bfa 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 378 1.7E-115 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AMBLS11_04615 ad822b2b48da96d3c318699c04a76bfa 382 Pfam PF02684 Lipid-A-disaccharide synthetase 8 376 1.1E-111 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AMBLS11_04615 ad822b2b48da96d3c318699c04a76bfa 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 381 37.618 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AMBLS11_11725 5a864a3fddc3c9151fd98c77a48ce128 550 SUPERFAMILY SSF56801 21 550 1.57E-149 T 14-10-2018 AMBLS11_11725 5a864a3fddc3c9151fd98c77a48ce128 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 542 4.6E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMBLS11_11725 5a864a3fddc3c9151fd98c77a48ce128 550 Gene3D G3DSA:3.30.300.310 456 550 3.2E-30 T 14-10-2018 AMBLS11_11725 5a864a3fddc3c9151fd98c77a48ce128 550 Gene3D G3DSA:3.40.50.12780 12 455 1.6E-119 T 14-10-2018 AMBLS11_11725 5a864a3fddc3c9151fd98c77a48ce128 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMBLS11_11725 5a864a3fddc3c9151fd98c77a48ce128 550 Pfam PF00501 AMP-binding enzyme 29 459 4.3E-112 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 SUPERFAMILY SSF55347 292 455 5.66E-52 T 14-10-2018 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 Gene3D G3DSA:3.30.360.10 291 456 1.1E-114 T 14-10-2018 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 4.3E-22 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 1.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 1.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 1.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 1.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 Gene3D G3DSA:3.40.50.720 133 467 1.1E-114 T 14-10-2018 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 1.6E-46 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 SUPERFAMILY SSF51735 132 308 3.05E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_10970 c8bb6214005db52d52d21abdf20f30b8 481 SMART SM00846 131 292 6.4E-54 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_11030 e84e96a76395912ab38dc087219496b9 608 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_11030 e84e96a76395912ab38dc087219496b9 608 SUPERFAMILY SSF143975 1 418 5.49E-146 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_11030 e84e96a76395912ab38dc087219496b9 608 SUPERFAMILY SSF52016 419 603 1.96E-57 T 14-10-2018 AMBLS11_11030 e84e96a76395912ab38dc087219496b9 608 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 1 602 58.229 T 14-10-2018 AMBLS11_11030 e84e96a76395912ab38dc087219496b9 608 Gene3D G3DSA:3.50.30.80 419 569 2.6E-50 T 14-10-2018 AMBLS11_11030 e84e96a76395912ab38dc087219496b9 608 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 0.0 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AMBLS11_11030 e84e96a76395912ab38dc087219496b9 608 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_11030 e84e96a76395912ab38dc087219496b9 608 Pfam PF00920 Dehydratase family 65 598 1.6E-157 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMBLS11_04240 c5fc40b4380c0efca2f0dc4b0b995ee8 365 Gene3D G3DSA:3.40.718.10 1 364 4.6E-155 T 14-10-2018 AMBLS11_04240 c5fc40b4380c0efca2f0dc4b0b995ee8 365 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 361 49.744 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AMBLS11_04240 c5fc40b4380c0efca2f0dc4b0b995ee8 365 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 357 1.7E-130 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMBLS11_04240 c5fc40b4380c0efca2f0dc4b0b995ee8 365 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 357 3.5E-155 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AMBLS11_04240 c5fc40b4380c0efca2f0dc4b0b995ee8 365 SUPERFAMILY SSF53659 3 361 1.73E-121 T 14-10-2018 AMBLS11_04240 c5fc40b4380c0efca2f0dc4b0b995ee8 365 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMBLS11_04240 c5fc40b4380c0efca2f0dc4b0b995ee8 365 SMART SM01329 5 357 2.8E-198 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMBLS11_05110 dbc52cfd0ca6f1e418e28fed875334e1 196 SUPERFAMILY SSF53335 8 182 3.16E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_05110 dbc52cfd0ca6f1e418e28fed875334e1 196 Pfam PF06080 Protein of unknown function (DUF938) 5 195 5.2E-54 T 14-10-2018 IPR010342 Protein of unknown function DUF938 AMBLS11_05110 dbc52cfd0ca6f1e418e28fed875334e1 196 Gene3D G3DSA:3.40.50.150 2 194 1.0E-11 T 14-10-2018 AMBLS11_08605 66c30ec1af5ebc671408a65ca8131b30 369 Gene3D G3DSA:3.90.15.10 141 261 1.5E-68 T 14-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AMBLS11_08605 66c30ec1af5ebc671408a65ca8131b30 369 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 109 332 5.7E-23 T 14-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AMBLS11_08605 66c30ec1af5ebc671408a65ca8131b30 369 SUPERFAMILY SSF55869 50 110 3.14E-17 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal AMBLS11_08605 66c30ec1af5ebc671408a65ca8131b30 369 Gene3D G3DSA:3.30.66.10 31 117 9.9E-26 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal AMBLS11_08605 66c30ec1af5ebc671408a65ca8131b30 369 SUPERFAMILY SSF56349 106 346 6.18E-51 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_08605 66c30ec1af5ebc671408a65ca8131b30 369 Gene3D G3DSA:1.10.132.120 118 343 1.5E-68 T 14-10-2018 AMBLS11_00580 9df7854448d3bc3bdcbabfb896082820 506 SUPERFAMILY SSF161098 263 489 3.92E-35 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_00580 9df7854448d3bc3bdcbabfb896082820 506 Gene3D G3DSA:1.10.3720.10 257 497 2.7E-33 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_00580 9df7854448d3bc3bdcbabfb896082820 506 Gene3D G3DSA:1.10.3720.10 7 248 7.5E-44 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_00580 9df7854448d3bc3bdcbabfb896082820 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 488 4.9E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMBLS11_00580 9df7854448d3bc3bdcbabfb896082820 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 238 3.5E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMBLS11_00580 9df7854448d3bc3bdcbabfb896082820 506 SUPERFAMILY SSF161098 4 243 8.78E-39 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_02695 8c1ee29632a20801bf4bd63b3e19c0ef 525 SUPERFAMILY SSF55154 25 247 1.96E-39 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 AMBLS11_02695 8c1ee29632a20801bf4bd63b3e19c0ef 525 SMART SM01118 25 231 2.8E-26 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AMBLS11_02695 8c1ee29632a20801bf4bd63b3e19c0ef 525 Gene3D G3DSA:2.40.320.10 22 227 6.9E-28 T 14-10-2018 AMBLS11_02695 8c1ee29632a20801bf4bd63b3e19c0ef 525 Pfam PF01928 CYTH domain 25 225 8.7E-24 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AMBLS11_17830 84167f4aac0cdf98eb7a23c74da56e19 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 9 457 1.6E-179 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMBLS11_17830 84167f4aac0cdf98eb7a23c74da56e19 462 PIRSF PIRSF000204 4 461 3.8E-173 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMBLS11_17830 84167f4aac0cdf98eb7a23c74da56e19 462 Gene3D G3DSA:3.40.50.1220 278 460 1.4E-80 T 14-10-2018 AMBLS11_17830 84167f4aac0cdf98eb7a23c74da56e19 462 SUPERFAMILY SSF52467 286 460 6.8E-68 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMBLS11_06515 86c41a39bdb44c4681d949b945d28ab9 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMBLS11_06515 86c41a39bdb44c4681d949b945d28ab9 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 3.2E-96 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMBLS11_06515 86c41a39bdb44c4681d949b945d28ab9 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.5E-89 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMBLS11_06515 86c41a39bdb44c4681d949b945d28ab9 269 SUPERFAMILY SSF51366 1 266 8.48E-88 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMBLS11_06515 86c41a39bdb44c4681d949b945d28ab9 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 36.621 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMBLS11_06515 86c41a39bdb44c4681d949b945d28ab9 269 Gene3D G3DSA:3.20.20.70 1 268 5.6E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_04440 8b63b03ca73810aa062bd3cc59456660 298 SUPERFAMILY SSF53448 3 247 6.19E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04440 8b63b03ca73810aa062bd3cc59456660 298 Gene3D G3DSA:3.90.550.10 2 205 1.4E-16 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04440 8b63b03ca73810aa062bd3cc59456660 298 Pfam PF00535 Glycosyl transferase family 2 5 126 2.1E-10 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_10485 0b585563d68e9b66674d256747e0638d 668 Pfam PF00672 HAMP domain 339 388 2.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_10485 0b585563d68e9b66674d256747e0638d 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 632 2.7E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_10485 0b585563d68e9b66674d256747e0638d 668 SMART SM00304 339 391 1.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_10485 0b585563d68e9b66674d256747e0638d 668 Gene3D G3DSA:1.10.287.950 338 668 4.9E-65 T 14-10-2018 AMBLS11_10485 0b585563d68e9b66674d256747e0638d 668 SMART SM00283 406 667 6.2E-56 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_10485 0b585563d68e9b66674d256747e0638d 668 SUPERFAMILY SSF58104 359 668 3.4E-67 T 14-10-2018 AMBLS11_12895 a4659e76dbc8aa172931c45b6a8fd701 118 SUPERFAMILY SSF89360 12 105 1.63E-18 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMBLS11_12895 a4659e76dbc8aa172931c45b6a8fd701 118 Gene3D G3DSA:2.60.300.12 12 118 1.1E-25 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMBLS11_12895 a4659e76dbc8aa172931c45b6a8fd701 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 13 113 1.6E-15 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AMBLS11_12895 a4659e76dbc8aa172931c45b6a8fd701 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 117 5.2E-24 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AMBLS11_10025 bd5e4a0517416e0bac4fc4799e056ce4 244 Pfam PF11306 Protein of unknown function (DUF3108) 17 231 5.6E-17 T 14-10-2018 IPR021457 Protein of unknown function DUF3108 AMBLS11_16020 c2138fbc7477508adf81e64c80974c32 168 Pfam PF02469 Fasciclin domain 39 161 1.1E-37 T 14-10-2018 IPR000782 FAS1 domain AMBLS11_16020 c2138fbc7477508adf81e64c80974c32 168 SMART SM00554 63 162 2.5E-32 T 14-10-2018 IPR000782 FAS1 domain AMBLS11_16020 c2138fbc7477508adf81e64c80974c32 168 Gene3D G3DSA:2.30.180.10 11 162 2.5E-49 T 14-10-2018 IPR036378 FAS1 domain superfamily AMBLS11_16020 c2138fbc7477508adf81e64c80974c32 168 SUPERFAMILY SSF82153 28 163 1.57E-43 T 14-10-2018 IPR036378 FAS1 domain superfamily AMBLS11_02895 3b0822e078d602d5f29fdf0d8822beb5 820 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 221 7.0E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_02895 3b0822e078d602d5f29fdf0d8822beb5 820 Pfam PF13620 Carboxypeptidase regulatory-like domain 23 81 1.1E-9 T 14-10-2018 AMBLS11_02895 3b0822e078d602d5f29fdf0d8822beb5 820 Gene3D G3DSA:2.170.130.10 108 231 7.8E-28 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_02895 3b0822e078d602d5f29fdf0d8822beb5 820 SUPERFAMILY SSF56935 103 818 3.52E-96 T 14-10-2018 AMBLS11_02895 3b0822e078d602d5f29fdf0d8822beb5 820 Gene3D G3DSA:2.60.40.1120 23 100 1.5E-9 T 14-10-2018 AMBLS11_02895 3b0822e078d602d5f29fdf0d8822beb5 820 Pfam PF00593 TonB dependent receptor 379 817 8.9E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_02895 3b0822e078d602d5f29fdf0d8822beb5 820 SUPERFAMILY SSF49464 23 110 1.49E-12 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AMBLS11_17540 f565431595226fb00e5281d63e9c777b 529 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_17540 f565431595226fb00e5281d63e9c777b 529 SMART SM00382 339 517 7.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_17540 f565431595226fb00e5281d63e9c777b 529 SUPERFAMILY SSF52540 333 512 1.22E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_17540 f565431595226fb00e5281d63e9c777b 529 Gene3D G3DSA:3.40.50.300 308 524 1.0E-36 T 14-10-2018 AMBLS11_17540 f565431595226fb00e5281d63e9c777b 529 Pfam PF00005 ABC transporter 333 468 2.4E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_18705 5f1bfff397be18a45008d1c95b6fc12e 612 Gene3D G3DSA:3.10.20.310 127 214 6.2E-16 T 14-10-2018 AMBLS11_18705 5f1bfff397be18a45008d1c95b6fc12e 612 Gene3D G3DSA:2.40.160.50 292 612 2.2E-86 T 14-10-2018 AMBLS11_18705 5f1bfff397be18a45008d1c95b6fc12e 612 Gene3D G3DSA:3.10.20.310 215 291 2.0E-15 T 14-10-2018 AMBLS11_18705 5f1bfff397be18a45008d1c95b6fc12e 612 Pfam PF17243 POTRA domain TamA domain 1 54 123 3.7E-12 T 14-10-2018 IPR035243 TamA, POTRA domain 1 AMBLS11_18705 5f1bfff397be18a45008d1c95b6fc12e 612 Pfam PF01103 Surface antigen 303 596 5.6E-35 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AMBLS11_18705 5f1bfff397be18a45008d1c95b6fc12e 612 Gene3D G3DSA:3.10.20.310 51 126 4.5E-6 T 14-10-2018 AMBLS11_12540 d24aaf82a17b0e604fdde643607648ec 193 PIRSF PIRSF016938 1 180 5.8E-23 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 AMBLS11_12540 d24aaf82a17b0e604fdde643607648ec 193 SUPERFAMILY SSF89069 4 68 6.54E-19 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AMBLS11_12540 d24aaf82a17b0e604fdde643607648ec 193 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 125 174 2.8E-6 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AMBLS11_12540 d24aaf82a17b0e604fdde643607648ec 193 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 4 77 7.0E-26 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AMBLS11_12540 d24aaf82a17b0e604fdde643607648ec 193 Gene3D G3DSA:1.10.10.880 3 68 4.6E-22 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AMBLS11_18340 77373b19baa752e36401e3f42ad93f49 77 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 2.0E-16 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 AMBLS11_18340 77373b19baa752e36401e3f42ad93f49 77 SUPERFAMILY SSF118001 1 71 1.2E-25 T 14-10-2018 IPR036685 YehU-like superfamily AMBLS11_18340 77373b19baa752e36401e3f42ad93f49 77 PIRSF PIRSF006169 1 76 8.4E-31 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 AMBLS11_18340 77373b19baa752e36401e3f42ad93f49 77 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 3.7E-30 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 AMBLS11_18340 77373b19baa752e36401e3f42ad93f49 77 Gene3D G3DSA:1.10.10.610 1 76 7.5E-25 T 14-10-2018 IPR036685 YehU-like superfamily AMBLS11_16410 5f5946a4a76b2e2791e22146ef123c89 104 Gene3D G3DSA:2.30.30.30 2 104 3.4E-41 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMBLS11_16410 5f5946a4a76b2e2791e22146ef123c89 104 SMART SM00739 4 31 1.3E-4 T 14-10-2018 IPR005824 KOW AMBLS11_16410 5f5946a4a76b2e2791e22146ef123c89 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 2.7E-41 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16410 5f5946a4a76b2e2791e22146ef123c89 104 Pfam PF00467 KOW motif 8 38 2.1E-7 T 14-10-2018 IPR005824 KOW AMBLS11_16410 5f5946a4a76b2e2791e22146ef123c89 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 102 5.5E-26 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16410 5f5946a4a76b2e2791e22146ef123c89 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16410 5f5946a4a76b2e2791e22146ef123c89 104 SUPERFAMILY SSF50104 4 102 1.12E-36 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMBLS11_16410 5f5946a4a76b2e2791e22146ef123c89 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 21.888 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 SUPERFAMILY SSF53448 2 249 4.17E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 Gene3D G3DSA:3.90.550.10 2 224 6.7E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 Gene3D G3DSA:2.160.10.10 225 452 9.4E-68 T 14-10-2018 AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 392 425 1.7E-9 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 1.0E-194 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 296 2.1E-4 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 315 347 1.4E-4 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 Pfam PF12804 MobA-like NTP transferase domain 5 126 3.1E-21 T 14-10-2018 IPR025877 MobA-like NTP transferase AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 SUPERFAMILY SSF51161 213 451 2.61E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMBLS11_17790 7b66a9cbe3bc0675523a868d598d5174 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.566 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AMBLS11_14695 e7efcd98bfac8bce4fe155009a4bc60b 441 Pfam PF01551 Peptidase family M23 306 400 7.2E-28 T 14-10-2018 IPR016047 Peptidase M23 AMBLS11_14695 e7efcd98bfac8bce4fe155009a4bc60b 441 Gene3D G3DSA:3.10.450.350 184 420 1.1E-78 T 14-10-2018 AMBLS11_14695 e7efcd98bfac8bce4fe155009a4bc60b 441 Pfam PF04225 Opacity-associated protein A LysM-like domain 80 155 3.3E-10 T 14-10-2018 IPR007340 Opacity-associated protein A AMBLS11_14695 e7efcd98bfac8bce4fe155009a4bc60b 441 Gene3D G3DSA:2.70.70.10 277 406 1.1E-78 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_14695 e7efcd98bfac8bce4fe155009a4bc60b 441 SUPERFAMILY SSF51261 165 401 5.23E-66 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_14695 e7efcd98bfac8bce4fe155009a4bc60b 441 Gene3D G3DSA:3.10.450.350 70 161 4.7E-15 T 14-10-2018 AMBLS11_14695 e7efcd98bfac8bce4fe155009a4bc60b 441 Pfam PF08525 Opacity-associated protein A N-terminal motif 13 40 6.2E-7 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal AMBLS11_00040 9fbe72d1ad6fbc927ffab28e8feca711 202 Gene3D G3DSA:1.10.340.30 13 197 1.0E-80 T 14-10-2018 AMBLS11_00040 9fbe72d1ad6fbc927ffab28e8feca711 202 SUPERFAMILY SSF48150 14 196 5.96E-77 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMBLS11_00040 9fbe72d1ad6fbc927ffab28e8feca711 202 Pfam PF03352 Methyladenine glycosylase 18 192 2.6E-76 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AMBLS11_00040 9fbe72d1ad6fbc927ffab28e8feca711 202 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 15 193 2.6E-74 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AMBLS11_07540 f52d5fc70c660d386cbd4979afb4ef39 200 Pfam PF07238 PilZ domain 93 179 7.5E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 AMBLS11_02915 6ae2e08ace141250dfa611b9b2f841c0 178 SUPERFAMILY SSF55729 7 164 1.83E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_02915 6ae2e08ace141250dfa611b9b2f841c0 178 Gene3D G3DSA:3.40.630.30 1 169 1.8E-29 T 14-10-2018 AMBLS11_02915 6ae2e08ace141250dfa611b9b2f841c0 178 Pfam PF13302 Acetyltransferase (GNAT) domain 12 150 5.9E-19 T 14-10-2018 IPR000182 GNAT domain AMBLS11_08780 3f0bb2d412231f141462ecc4378291fe 245 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 2 243 27.592 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AMBLS11_08780 3f0bb2d412231f141462ecc4378291fe 245 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 225 4.0E-36 T 14-10-2018 AMBLS11_03205 5003ef187e6233b79c05600b65e7907e 229 SUPERFAMILY SSF52172 2 128 1.15E-42 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_03205 5003ef187e6233b79c05600b65e7907e 229 SUPERFAMILY SSF46894 127 226 1.08E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_03205 5003ef187e6233b79c05600b65e7907e 229 SMART SM00448 3 116 1.0E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03205 5003ef187e6233b79c05600b65e7907e 229 Gene3D G3DSA:3.40.50.2300 1 127 4.8E-38 T 14-10-2018 AMBLS11_03205 5003ef187e6233b79c05600b65e7907e 229 Pfam PF00072 Response regulator receiver domain 5 117 9.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_03205 5003ef187e6233b79c05600b65e7907e 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 3.2E-111 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AMBLS11_03205 5003ef187e6233b79c05600b65e7907e 229 SMART SM00862 150 225 3.4E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_03205 5003ef187e6233b79c05600b65e7907e 229 Gene3D G3DSA:1.10.10.10 128 229 2.1E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03205 5003ef187e6233b79c05600b65e7907e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 4.7E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_14665 13988e2b8c04c0c212dea53da2f30cc2 452 Pfam PF01266 FAD dependent oxidoreductase 42 409 3.5E-44 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMBLS11_14665 13988e2b8c04c0c212dea53da2f30cc2 452 SUPERFAMILY SSF51905 14 412 2.04E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_14665 13988e2b8c04c0c212dea53da2f30cc2 452 Gene3D G3DSA:3.30.9.10 135 360 1.1E-57 T 14-10-2018 AMBLS11_14665 13988e2b8c04c0c212dea53da2f30cc2 452 Gene3D G3DSA:3.50.50.60 43 408 1.1E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_12350 a80407075c754f83f3abd8fd771dcd4a 119 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 39 114 2.0E-6 T 14-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 AMBLS11_04540 eeb9ad4ea30bab4b5b98ba446840b204 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 0.0015 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_04540 eeb9ad4ea30bab4b5b98ba446840b204 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMBLS11_04540 eeb9ad4ea30bab4b5b98ba446840b204 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 1.2E-144 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AMBLS11_04540 eeb9ad4ea30bab4b5b98ba446840b204 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.481 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AMBLS11_04540 eeb9ad4ea30bab4b5b98ba446840b204 274 Gene3D G3DSA:1.10.166.10 1 70 2.1E-28 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 AMBLS11_04540 eeb9ad4ea30bab4b5b98ba446840b204 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.5E-13 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_04540 eeb9ad4ea30bab4b5b98ba446840b204 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 1.8E-24 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AMBLS11_04540 eeb9ad4ea30bab4b5b98ba446840b204 274 SUPERFAMILY SSF51161 2 256 1.04E-75 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_04540 eeb9ad4ea30bab4b5b98ba446840b204 274 Gene3D G3DSA:2.160.10.10 87 257 7.0E-55 T 14-10-2018 AMBLS11_17845 f86dead91425732359f41bdd868a69e7 968 Pfam PF00593 TonB dependent receptor 502 965 1.6E-30 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_17845 f86dead91425732359f41bdd868a69e7 968 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 36 968 2.4E-202 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_17845 f86dead91425732359f41bdd868a69e7 968 SUPERFAMILY SSF56935 23 968 1.57E-91 T 14-10-2018 AMBLS11_17845 f86dead91425732359f41bdd868a69e7 968 Gene3D G3DSA:2.170.130.10 38 161 1.2E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_17845 f86dead91425732359f41bdd868a69e7 968 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 156 1.7E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_09950 154b1885906316229dc289b1d83f84b8 367 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 2 361 37.467 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC AMBLS11_09950 154b1885906316229dc289b1d83f84b8 367 Pfam PF06804 NlpB/DapX lipoprotein 33 360 3.0E-97 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein AMBLS11_09950 154b1885906316229dc289b1d83f84b8 367 Gene3D G3DSA:3.30.310.170 242 366 2.1E-35 T 14-10-2018 AMBLS11_02165 3ca48bb049cd4dc357840eb1d6f5d1a0 169 Gene3D G3DSA:3.10.420.10 14 165 2.8E-59 T 14-10-2018 IPR035958 SecB-like superfamily AMBLS11_02165 3ca48bb049cd4dc357840eb1d6f5d1a0 169 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 19 155 2.3E-60 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMBLS11_02165 3ca48bb049cd4dc357840eb1d6f5d1a0 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 109 131 4.6E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMBLS11_02165 3ca48bb049cd4dc357840eb1d6f5d1a0 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 85 105 4.6E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMBLS11_02165 3ca48bb049cd4dc357840eb1d6f5d1a0 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 135 153 4.6E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMBLS11_02165 3ca48bb049cd4dc357840eb1d6f5d1a0 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 25 42 4.6E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMBLS11_02165 3ca48bb049cd4dc357840eb1d6f5d1a0 169 Pfam PF02556 Preprotein translocase subunit SecB 17 155 1.6E-57 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMBLS11_02165 3ca48bb049cd4dc357840eb1d6f5d1a0 169 Hamap MF_00821 Protein-export protein SecB [secB]. 1 157 33.78 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMBLS11_02165 3ca48bb049cd4dc357840eb1d6f5d1a0 169 SUPERFAMILY SSF54611 13 152 1.0E-53 T 14-10-2018 IPR035958 SecB-like superfamily AMBLS11_11980 947eef8e1500b23cba3ab49a91d66310 429 Pfam PF12167 Arm DNA-binding domain 20 78 4.6E-7 T 14-10-2018 IPR022000 Min27-like integrase, DNA-binding domain AMBLS11_11980 947eef8e1500b23cba3ab49a91d66310 429 SUPERFAMILY SSF56349 97 413 4.12E-46 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_11980 947eef8e1500b23cba3ab49a91d66310 429 Pfam PF00589 Phage integrase family 220 406 4.7E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_11980 947eef8e1500b23cba3ab49a91d66310 429 Gene3D G3DSA:1.10.150.130 95 208 7.0E-10 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMBLS11_11980 947eef8e1500b23cba3ab49a91d66310 429 Pfam PF13102 Phage integrase SAM-like domain 101 196 2.5E-6 T 14-10-2018 IPR025269 Phage integrase SAM-like domain AMBLS11_11980 947eef8e1500b23cba3ab49a91d66310 429 Gene3D G3DSA:1.10.443.10 226 423 3.8E-36 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_08010 7d10bf9ebfa1420452cf87e4d038cea9 223 SUPERFAMILY SSF56784 6 212 2.76E-48 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_08010 7d10bf9ebfa1420452cf87e4d038cea9 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 69 186 2.9E-19 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_08010 7d10bf9ebfa1420452cf87e4d038cea9 223 Gene3D G3DSA:3.40.50.1000 9 195 1.1E-54 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_08010 7d10bf9ebfa1420452cf87e4d038cea9 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 184 7.2E-27 T 14-10-2018 AMBLS11_08010 7d10bf9ebfa1420452cf87e4d038cea9 223 Gene3D G3DSA:1.10.150.240 21 87 1.1E-54 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMBLS11_14825 b9498818663e4dc4f00e3c2257566e77 125 Pfam PF00072 Response regulator receiver domain 4 116 5.1E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14825 b9498818663e4dc4f00e3c2257566e77 125 SMART SM00448 2 117 1.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14825 b9498818663e4dc4f00e3c2257566e77 125 SUPERFAMILY SSF52172 3 121 2.28E-23 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14825 b9498818663e4dc4f00e3c2257566e77 125 Gene3D G3DSA:3.40.50.2300 2 124 1.4E-21 T 14-10-2018 AMBLS11_18285 dd8758732d3cadb0bbc15dc8e97f8352 477 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 473 1.6E-66 T 14-10-2018 IPR010352 Protein of unknown function DUF945 AMBLS11_15485 b0b3baa7d4729ffa7fca1f6282863446 194 Pfam PF13690 Chemotaxis phosphatase CheX 69 139 1.8E-6 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain AMBLS11_15485 b0b3baa7d4729ffa7fca1f6282863446 194 Pfam PF04509 CheC-like family 10 45 2.3E-9 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 AMBLS11_15485 b0b3baa7d4729ffa7fca1f6282863446 194 SUPERFAMILY SSF103039 7 190 1.7E-36 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_15485 b0b3baa7d4729ffa7fca1f6282863446 194 Gene3D G3DSA:3.40.1550.10 5 190 9.7E-39 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_16765 1d388c97cd54700b55a1e248127dd39e 408 Pfam PF08668 HDOD domain 204 320 1.9E-14 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMBLS11_16765 1d388c97cd54700b55a1e248127dd39e 408 Gene3D G3DSA:1.10.3210.10 195 338 3.2E-23 T 14-10-2018 AMBLS11_16765 1d388c97cd54700b55a1e248127dd39e 408 PIRSF PIRSF003180 1 404 5.1E-133 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AMBLS11_16765 1d388c97cd54700b55a1e248127dd39e 408 SUPERFAMILY SSF109604 181 400 1.66E-41 T 14-10-2018 AMBLS11_16765 1d388c97cd54700b55a1e248127dd39e 408 SUPERFAMILY SSF141868 4 192 4.71E-29 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_16765 1d388c97cd54700b55a1e248127dd39e 408 Pfam PF00563 EAL domain 77 190 8.0E-14 T 14-10-2018 IPR001633 EAL domain AMBLS11_16765 1d388c97cd54700b55a1e248127dd39e 408 SMART SM00052 5 195 2.7E-4 T 14-10-2018 IPR001633 EAL domain AMBLS11_16765 1d388c97cd54700b55a1e248127dd39e 408 Gene3D G3DSA:3.20.20.450 3 194 1.7E-18 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_12130 7c6c610ee55ce1356704001c8402d31a 247 Pfam PF07103 Protein of unknown function (DUF1365) 6 242 6.1E-65 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 AMBLS11_08055 08937146ad03be05b92a3dddc17b53e8 100 SUPERFAMILY SSF55248 1 99 3.01E-32 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMBLS11_08055 08937146ad03be05b92a3dddc17b53e8 100 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 100 22.802 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMBLS11_08055 08937146ad03be05b92a3dddc17b53e8 100 Gene3D G3DSA:3.30.1360.20 1 100 1.3E-33 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMBLS11_08055 08937146ad03be05b92a3dddc17b53e8 100 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 98 1.2E-30 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMBLS11_02680 51d492bbb27d1dff446b45c696a70a9e 540 SMART SM00304 209 263 7.8E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_02680 51d492bbb27d1dff446b45c696a70a9e 540 Gene3D G3DSA:3.30.450.20 34 185 1.4E-52 T 14-10-2018 AMBLS11_02680 51d492bbb27d1dff446b45c696a70a9e 540 SMART SM01049 35 126 4.2E-30 T 14-10-2018 IPR033480 Single Cache domain 2 AMBLS11_02680 51d492bbb27d1dff446b45c696a70a9e 540 SUPERFAMILY SSF58104 231 540 1.44E-69 T 14-10-2018 AMBLS11_02680 51d492bbb27d1dff446b45c696a70a9e 540 Pfam PF00672 HAMP domain 210 257 5.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_02680 51d492bbb27d1dff446b45c696a70a9e 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 503 1.2E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_02680 51d492bbb27d1dff446b45c696a70a9e 540 Pfam PF08269 Cache domain 45 181 1.1E-38 T 14-10-2018 IPR004010 Double Cache domain 2 AMBLS11_02680 51d492bbb27d1dff446b45c696a70a9e 540 SMART SM00283 278 539 4.0E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_02680 51d492bbb27d1dff446b45c696a70a9e 540 Gene3D G3DSA:1.10.287.950 209 540 4.3E-72 T 14-10-2018 AMBLS11_06695 ffd8dcbcfa818cf215e8d96e031eca51 227 Gene3D G3DSA:1.20.950.20 1 169 1.1E-17 T 14-10-2018 AMBLS11_06695 ffd8dcbcfa818cf215e8d96e031eca51 227 SUPERFAMILY SSF81342 2 189 1.57E-36 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMBLS11_06695 ffd8dcbcfa818cf215e8d96e031eca51 227 Pfam PF01292 Prokaryotic cytochrome b561 7 181 6.2E-27 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMBLS11_10070 2e95b99d44411e89d3fb944020600023 584 PIRSF PIRSF003059 7 580 7.8E-175 T 14-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related AMBLS11_10070 2e95b99d44411e89d3fb944020600023 584 Gene3D G3DSA:3.20.20.80 63 468 1.3E-156 T 14-10-2018 AMBLS11_10070 2e95b99d44411e89d3fb944020600023 584 Pfam PF00128 Alpha amylase, catalytic domain 93 348 7.6E-18 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_10070 2e95b99d44411e89d3fb944020600023 584 SMART SM00642 60 491 8.0E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_10070 2e95b99d44411e89d3fb944020600023 584 Gene3D G3DSA:2.60.40.1180 507 579 1.6E-8 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMBLS11_10070 2e95b99d44411e89d3fb944020600023 584 Gene3D G3DSA:3.90.400.10 145 218 1.3E-156 T 14-10-2018 AMBLS11_10070 2e95b99d44411e89d3fb944020600023 584 SUPERFAMILY SSF51445 56 542 1.52E-95 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 Gene3D G3DSA:3.40.50.720 2 249 6.3E-48 T 14-10-2018 AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 SUPERFAMILY SSF51735 4 246 1.92E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 Pfam PF00106 short chain dehydrogenase 6 198 5.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_12680 bcbd9bc7ab3d0723f9a6dff115d0262b 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 Gene3D G3DSA:3.40.190.10 93 157 2.5E-9 T 14-10-2018 AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.9E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 Pfam PF03466 LysR substrate binding domain 93 236 1.4E-8 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 SUPERFAMILY SSF53850 87 259 5.79E-13 T 14-10-2018 AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 Gene3D G3DSA:3.40.190.10 158 243 2.5E-9 T 14-10-2018 AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 SUPERFAMILY SSF46785 1 83 1.87E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_10840 23f6e97a28a553b8b6f51714f4b564bc 276 Gene3D G3DSA:1.10.10.10 1 90 2.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_11530 cf67e324311f9d33b2694ecb8510d98d 521 SUPERFAMILY SSF56801 12 520 1.7E-108 T 14-10-2018 AMBLS11_11530 cf67e324311f9d33b2694ecb8510d98d 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 509 1.5E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMBLS11_11530 cf67e324311f9d33b2694ecb8510d98d 521 Gene3D G3DSA:3.30.300.310 421 521 4.0E-26 T 14-10-2018 AMBLS11_11530 cf67e324311f9d33b2694ecb8510d98d 521 Pfam PF00501 AMP-binding enzyme 14 425 1.8E-65 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMBLS11_10065 40903d84876876f33337d25743c9b592 407 Gene3D G3DSA:3.90.550.10 11 324 2.0E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_10065 40903d84876876f33337d25743c9b592 407 SUPERFAMILY SSF53448 38 404 5.34E-94 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_18605 e25bcfc20dd6f6389898d5dc1e8ff644 405 Pfam PF02628 Cytochrome oxidase assembly protein 3 337 2.9E-84 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AMBLS11_13490 4574bd58c7c406cd29a857ff978368b7 748 SUPERFAMILY SSF56003 174 746 1.44E-136 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMBLS11_13490 4574bd58c7c406cd29a857ff978368b7 748 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 131 2.4E-18 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMBLS11_13490 4574bd58c7c406cd29a857ff978368b7 748 Gene3D G3DSA:3.30.365.10 187 279 3.1E-42 T 14-10-2018 AMBLS11_13490 4574bd58c7c406cd29a857ff978368b7 748 Gene3D G3DSA:3.30.365.10 176 385 3.1E-42 T 14-10-2018 AMBLS11_13490 4574bd58c7c406cd29a857ff978368b7 748 SUPERFAMILY SSF54665 5 147 1.7E-28 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMBLS11_13490 4574bd58c7c406cd29a857ff978368b7 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 176 684 3.4E-100 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMBLS11_13490 4574bd58c7c406cd29a857ff978368b7 748 Gene3D G3DSA:3.30.365.20 404 748 7.0E-85 T 14-10-2018 AMBLS11_13490 4574bd58c7c406cd29a857ff978368b7 748 Gene3D G3DSA:3.90.1170.50 1 134 2.0E-26 T 14-10-2018 AMBLS11_13490 4574bd58c7c406cd29a857ff978368b7 748 SMART SM01008 23 136 3.1E-19 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMBLS11_01960 365c6ab0cb717ed47bc08c254a37e54c 388 Gene3D G3DSA:1.10.3210.10 88 376 2.7E-30 T 14-10-2018 AMBLS11_01960 365c6ab0cb717ed47bc08c254a37e54c 388 SUPERFAMILY SSF109604 105 294 8.47E-20 T 14-10-2018 AMBLS11_01960 365c6ab0cb717ed47bc08c254a37e54c 388 Pfam PF08668 HDOD domain 105 266 1.1E-12 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMBLS11_10660 55a9e489a742a6062acd2f20df2771b0 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 4.4E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMBLS11_10660 55a9e489a742a6062acd2f20df2771b0 231 SUPERFAMILY SSF161098 6 221 2.75E-43 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_10660 55a9e489a742a6062acd2f20df2771b0 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 16 221 1.2E-65 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AMBLS11_10660 55a9e489a742a6062acd2f20df2771b0 231 Gene3D G3DSA:1.10.3720.10 1 226 1.2E-48 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_12800 a7a5a6a84e9c7951e5ac987ac7a219a2 297 Pfam PF13469 Sulfotransferase family 118 255 2.5E-13 T 14-10-2018 AMBLS11_12800 a7a5a6a84e9c7951e5ac987ac7a219a2 297 Gene3D G3DSA:3.40.50.300 6 280 6.2E-24 T 14-10-2018 AMBLS11_12800 a7a5a6a84e9c7951e5ac987ac7a219a2 297 SUPERFAMILY SSF52540 12 265 3.84E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09250 4d41e20888b1e0c7f51f4416976c6f57 479 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 130 469 1.1E-105 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AMBLS11_09250 4d41e20888b1e0c7f51f4416976c6f57 479 Pfam PF04715 Anthranilate synthase component I, N terminal region 36 174 4.6E-18 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_09250 4d41e20888b1e0c7f51f4416976c6f57 479 SUPERFAMILY SSF56322 37 475 2.62E-127 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMBLS11_09250 4d41e20888b1e0c7f51f4416976c6f57 479 PRINTS PR00095 Anthranilate synthase component I signature 408 422 3.8E-12 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_09250 4d41e20888b1e0c7f51f4416976c6f57 479 PRINTS PR00095 Anthranilate synthase component I signature 423 437 3.8E-12 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_09250 4d41e20888b1e0c7f51f4416976c6f57 479 PRINTS PR00095 Anthranilate synthase component I signature 314 327 3.8E-12 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_09250 4d41e20888b1e0c7f51f4416976c6f57 479 PRINTS PR00095 Anthranilate synthase component I signature 328 341 3.8E-12 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMBLS11_09250 4d41e20888b1e0c7f51f4416976c6f57 479 Pfam PF00425 chorismate binding enzyme 213 466 3.5E-93 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMBLS11_09250 4d41e20888b1e0c7f51f4416976c6f57 479 Gene3D G3DSA:3.60.120.10 20 476 1.8E-152 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMBLS11_13000 8b1aa0a23c317e0e196769b3955298fd 226 Pfam PF04012 PspA/IM30 family 2 222 6.5E-37 T 14-10-2018 IPR007157 PspA/IM30 AMBLS11_06920 ad3a7af5d13baa7c52d505dc90335925 284 Gene3D G3DSA:3.20.20.70 2 282 2.0E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_06920 ad3a7af5d13baa7c52d505dc90335925 284 SUPERFAMILY SSF51569 5 277 1.1E-100 T 14-10-2018 AMBLS11_06920 ad3a7af5d13baa7c52d505dc90335925 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 20 274 2.8E-114 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMBLS11_06920 ad3a7af5d13baa7c52d505dc90335925 284 Pfam PF00793 DAHP synthetase I family 17 273 1.3E-65 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMBLS11_06920 ad3a7af5d13baa7c52d505dc90335925 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 15 276 49.225 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMBLS11_12430 78a930af03ba7a5e6fe866ce588fa4a1 517 Gene3D G3DSA:3.40.50.150 190 302 4.9E-6 T 14-10-2018 AMBLS11_12430 78a930af03ba7a5e6fe866ce588fa4a1 517 SUPERFAMILY SSF110849 14 101 6.54E-6 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AMBLS11_12430 78a930af03ba7a5e6fe866ce588fa4a1 517 Gene3D G3DSA:3.40.50.150 309 499 1.1E-14 T 14-10-2018 AMBLS11_12430 78a930af03ba7a5e6fe866ce588fa4a1 517 SUPERFAMILY SSF53335 223 410 2.89E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_17200 c6f7e2b8b0f3f66285a625e507ac0630 322 SUPERFAMILY SSF53613 1 321 2.81E-76 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_17200 c6f7e2b8b0f3f66285a625e507ac0630 322 Pfam PF00294 pfkB family carbohydrate kinase 2 316 2.3E-59 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMBLS11_17200 c6f7e2b8b0f3f66285a625e507ac0630 322 Gene3D G3DSA:3.40.1190.20 1 322 2.8E-92 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_17200 c6f7e2b8b0f3f66285a625e507ac0630 322 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMBLS11_17200 c6f7e2b8b0f3f66285a625e507ac0630 322 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMBLS11_03240 8b744a7f15f6a3f64d77796f79c5bb98 454 Pfam PF01618 MotA/TolQ/ExbB proton channel family 320 440 4.4E-30 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMBLS11_03240 8b744a7f15f6a3f64d77796f79c5bb98 454 PIRSF PIRSF037714 1 454 1.7E-168 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AMBLS11_04420 e2acd2d8723a1414402f42a51a57827a 610 Pfam PF02563 Polysaccharide biosynthesis/export protein 131 204 1.2E-12 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMBLS11_04420 e2acd2d8723a1414402f42a51a57827a 610 Gene3D G3DSA:3.10.560.10 502 580 1.3E-10 T 14-10-2018 AMBLS11_04420 e2acd2d8723a1414402f42a51a57827a 610 Gene3D G3DSA:3.30.1950.10 137 208 1.1E-14 T 14-10-2018 AMBLS11_04420 e2acd2d8723a1414402f42a51a57827a 610 Gene3D G3DSA:3.10.560.10 132 293 1.1E-14 T 14-10-2018 AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 Pfam PF03466 LysR substrate binding domain 99 292 4.3E-41 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 Gene3D G3DSA:1.10.10.10 4 91 2.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 SUPERFAMILY SSF46785 7 117 7.32E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 SUPERFAMILY SSF53850 101 291 3.04E-37 T 14-10-2018 AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 Gene3D G3DSA:3.40.190.10 168 269 2.7E-53 T 14-10-2018 AMBLS11_05130 fa224a14d2fa5d9415a03049d7ffbc14 322 Gene3D G3DSA:3.40.190.10 100 298 2.7E-53 T 14-10-2018 AMBLS11_18130 e49ac7bab154ca5ac88781bb97845ac9 539 Gene3D G3DSA:3.90.1300.10 8 516 1.9E-155 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMBLS11_18130 e49ac7bab154ca5ac88781bb97845ac9 539 SUPERFAMILY SSF75304 30 516 3.01E-114 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMBLS11_18130 e49ac7bab154ca5ac88781bb97845ac9 539 Pfam PF01425 Amidase 51 500 9.6E-96 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMBLS11_18445 d6f8ccb690de18b24f21265648a58bbb 958 Gene3D G3DSA:1.20.58.2150 480 656 1.7E-63 T 14-10-2018 AMBLS11_18445 d6f8ccb690de18b24f21265648a58bbb 958 Pfam PF15979 Glycosyl hydrolase family 115 189 522 2.4E-152 T 14-10-2018 IPR031924 Glycosyl hydrolase family 115 AMBLS11_18445 d6f8ccb690de18b24f21265648a58bbb 958 Gene3D G3DSA:3.20.20.520 193 478 1.0E-133 T 14-10-2018 AMBLS11_18445 d6f8ccb690de18b24f21265648a58bbb 958 SUPERFAMILY SSF55545 54 172 4.19E-10 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMBLS11_18445 d6f8ccb690de18b24f21265648a58bbb 958 Gene3D G3DSA:2.60.120.1620 776 956 3.9E-50 T 14-10-2018 AMBLS11_18445 d6f8ccb690de18b24f21265648a58bbb 958 Gene3D G3DSA:3.30.379.10 26 192 2.5E-55 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMBLS11_03655 fe7b6e5bcbb18834eec8de7ff212aade 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 44.369 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_03655 fe7b6e5bcbb18834eec8de7ff212aade 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 417 1.0E-178 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMBLS11_03655 fe7b6e5bcbb18834eec8de7ff212aade 420 Gene3D G3DSA:3.65.10.10 21 230 2.6E-167 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMBLS11_03655 fe7b6e5bcbb18834eec8de7ff212aade 420 Gene3D G3DSA:3.65.10.10 9 415 2.6E-167 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMBLS11_03655 fe7b6e5bcbb18834eec8de7ff212aade 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 408 7.4E-117 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AMBLS11_03655 fe7b6e5bcbb18834eec8de7ff212aade 420 SUPERFAMILY SSF55205 2 419 4.41E-142 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMBLS11_12600 f7c861cadeebdcb437dbee472adf0fb1 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 1.0E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_12600 f7c861cadeebdcb437dbee472adf0fb1 184 SUPERFAMILY SSF54523 22 141 6.83E-13 T 14-10-2018 AMBLS11_12600 f7c861cadeebdcb437dbee472adf0fb1 184 Gene3D G3DSA:3.30.700.10 22 168 2.4E-11 T 14-10-2018 AMBLS11_12600 f7c861cadeebdcb437dbee472adf0fb1 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMBLS11_14915 3312ea428c12b7f4a9cc8fea3f2e23d9 140 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 9.7E-33 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AMBLS11_14915 3312ea428c12b7f4a9cc8fea3f2e23d9 140 SUPERFAMILY SSF102400 1 137 1.14E-35 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AMBLS11_14915 3312ea428c12b7f4a9cc8fea3f2e23d9 140 Gene3D G3DSA:3.40.50.10110 1 139 7.7E-40 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AMBLS11_14125 77d85aae587e254500d95d7e7f375707 361 SUPERFAMILY SSF53474 91 308 9.99E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_14125 77d85aae587e254500d95d7e7f375707 361 Gene3D G3DSA:3.40.50.1820 80 317 4.1E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_14125 77d85aae587e254500d95d7e7f375707 361 Pfam PF12146 Serine aminopeptidase, S33 93 224 1.9E-9 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 AMBLS11_07575 d451ab79d7eabb117dca14bdebf213d3 245 SUPERFAMILY SSF48613 2 228 2.75E-16 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMBLS11_02295 83a3cf7463f067bc1d297b8a84d1fb69 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMBLS11_02295 83a3cf7463f067bc1d297b8a84d1fb69 258 PIRSF PIRSF005902 1 258 6.9E-73 T 14-10-2018 IPR001130 TatD family GO:0016788 AMBLS11_02295 83a3cf7463f067bc1d297b8a84d1fb69 258 SUPERFAMILY SSF51556 3 257 8.51E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_02295 83a3cf7463f067bc1d297b8a84d1fb69 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMBLS11_02295 83a3cf7463f067bc1d297b8a84d1fb69 258 Pfam PF01026 TatD related DNase 4 256 2.5E-67 T 14-10-2018 IPR001130 TatD family GO:0016788 AMBLS11_02295 83a3cf7463f067bc1d297b8a84d1fb69 258 Gene3D G3DSA:3.20.20.140 2 258 1.4E-88 T 14-10-2018 AMBLS11_12370 161fdb145162bb507bc671c9ea0f6bbc 171 PIRSF PIRSF002070 2 158 3.1E-39 T 14-10-2018 AMBLS11_12370 161fdb145162bb507bc671c9ea0f6bbc 171 Hamap MF_00984 Single-stranded DNA-binding protein. 6 113 38.383 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMBLS11_12370 161fdb145162bb507bc671c9ea0f6bbc 171 SUPERFAMILY SSF50249 5 157 7.2E-61 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_12370 161fdb145162bb507bc671c9ea0f6bbc 171 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 157 6.9E-61 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMBLS11_12370 161fdb145162bb507bc671c9ea0f6bbc 171 Gene3D G3DSA:2.40.50.140 2 128 6.8E-50 T 14-10-2018 AMBLS11_12370 161fdb145162bb507bc671c9ea0f6bbc 171 Pfam PF00436 Single-strand binding protein family 6 109 3.8E-44 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AMBLS11_08525 3adf29460f0c3796fb70a5425694edc3 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 5.3E-35 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AMBLS11_08525 3adf29460f0c3796fb70a5425694edc3 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 4.0E-35 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AMBLS11_08525 3adf29460f0c3796fb70a5425694edc3 97 Gene3D G3DSA:3.30.110.60 1 97 1.3E-34 T 14-10-2018 IPR035920 YhbY-like superfamily AMBLS11_08525 3adf29460f0c3796fb70a5425694edc3 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.6E-21 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AMBLS11_08525 3adf29460f0c3796fb70a5425694edc3 97 SUPERFAMILY SSF75471 1 95 4.19E-30 T 14-10-2018 IPR035920 YhbY-like superfamily AMBLS11_08525 3adf29460f0c3796fb70a5425694edc3 97 SMART SM01103 3 86 3.1E-42 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AMBLS11_00775 652f48028d37b52da86da068d2ff16cb 246 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 214 4.0E-14 T 14-10-2018 AMBLS11_00775 652f48028d37b52da86da068d2ff16cb 246 SUPERFAMILY SSF56784 11 245 3.25E-31 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_00775 652f48028d37b52da86da068d2ff16cb 246 Gene3D G3DSA:3.40.50.1000 12 239 4.8E-50 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_00775 652f48028d37b52da86da068d2ff16cb 246 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 135 209 1.0E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_00775 652f48028d37b52da86da068d2ff16cb 246 Gene3D G3DSA:1.20.120.1600 24 118 4.8E-50 T 14-10-2018 AMBLS11_03705 95c7376efe29972c59a06bbaf541d8d7 860 SUPERFAMILY SSF56059 57 210 4.24E-10 T 14-10-2018 AMBLS11_03705 95c7376efe29972c59a06bbaf541d8d7 860 Pfam PF14403 Circularly permuted ATP-grasp type 2 74 345 6.8E-75 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 AMBLS11_03705 95c7376efe29972c59a06bbaf541d8d7 860 Gene3D G3DSA:3.40.50.11290 209 307 2.3E-32 T 14-10-2018 AMBLS11_03705 95c7376efe29972c59a06bbaf541d8d7 860 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 484 810 3.4E-50 T 14-10-2018 IPR007296 Domain of unknown function DUF403 AMBLS11_09735 a1c2f67445a67ae01a461a53667ffd97 149 Pfam PF07681 DoxX 19 105 2.0E-21 T 14-10-2018 IPR032808 DoxX family AMBLS11_05140 5e2f6e35185ccbd301a6032d526e8ce0 545 Pfam PF00916 Sulfate permease family 9 365 1.8E-81 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMBLS11_05140 5e2f6e35185ccbd301a6032d526e8ce0 545 Gene3D G3DSA:3.30.750.24 407 535 1.3E-19 T 14-10-2018 IPR036513 STAS domain superfamily AMBLS11_05140 5e2f6e35185ccbd301a6032d526e8ce0 545 SUPERFAMILY SSF52091 421 526 1.49E-13 T 14-10-2018 IPR036513 STAS domain superfamily AMBLS11_05140 5e2f6e35185ccbd301a6032d526e8ce0 545 Pfam PF01740 STAS domain 424 521 1.2E-9 T 14-10-2018 IPR002645 STAS domain AMBLS11_16955 32df40b06ba82e2c56e4575eb1d44330 128 Pfam PF01618 MotA/TolQ/ExbB proton channel family 38 125 1.8E-15 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMBLS11_08775 75dbc970b74c2b64303b0a69577b2e51 549 Gene3D G3DSA:1.25.40.10 71 309 3.9E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_08775 75dbc970b74c2b64303b0a69577b2e51 549 SUPERFAMILY SSF81901 169 264 2.75E-6 T 14-10-2018 AMBLS11_02480 b55c780fe4446abfd539656f74adf69e 265 Gene3D G3DSA:3.40.190.10 107 207 4.4E-26 T 14-10-2018 AMBLS11_02480 b55c780fe4446abfd539656f74adf69e 265 SUPERFAMILY SSF53850 24 243 6.59E-37 T 14-10-2018 AMBLS11_02480 b55c780fe4446abfd539656f74adf69e 265 SMART SM00062 25 256 0.001 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_02480 b55c780fe4446abfd539656f74adf69e 265 Gene3D G3DSA:3.40.190.10 31 243 4.4E-26 T 14-10-2018 AMBLS11_02480 b55c780fe4446abfd539656f74adf69e 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 244 1.5E-21 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_04690 3b0c515e43b88e51bac0cae814fb28dd 161 Pfam PF02169 LPP20 lipoprotein 42 138 8.8E-12 T 14-10-2018 IPR024952 Lipoprotein LPP20-like AMBLS11_04690 3b0c515e43b88e51bac0cae814fb28dd 161 PIRSF PIRSF028687 9 161 4.1E-45 T 14-10-2018 IPR007293 Flagellar protein FlgP AMBLS11_06890 36144c8b2131eba79a9279370413b9c2 208 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 208 20.043 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AMBLS11_06890 36144c8b2131eba79a9279370413b9c2 208 SUPERFAMILY SSF89392 17 207 5.49E-32 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMBLS11_06890 36144c8b2131eba79a9279370413b9c2 208 Gene3D G3DSA:2.50.20.10 23 208 1.4E-42 T 14-10-2018 AMBLS11_06890 36144c8b2131eba79a9279370413b9c2 208 Pfam PF03550 Outer membrane lipoprotein LolB 43 206 9.8E-35 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AMBLS11_06890 36144c8b2131eba79a9279370413b9c2 208 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 3 207 1.8E-30 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AMBLS11_15120 a467639e8b58810b56bfce3d99e68990 110 Gene3D G3DSA:3.30.429.10 1 110 4.9E-36 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily AMBLS11_15120 a467639e8b58810b56bfce3d99e68990 110 SUPERFAMILY SSF55331 1 110 2.0E-30 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily AMBLS11_15120 a467639e8b58810b56bfce3d99e68990 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 1.7E-33 T 14-10-2018 IPR015017 Protein of unknown function DUF1904 AMBLS11_05620 d5496bd582e11dfe340f8927be20e8d6 116 PIRSF PIRSF005894 3 113 4.8E-51 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AMBLS11_05620 d5496bd582e11dfe340f8927be20e8d6 116 Gene3D G3DSA:3.40.30.10 7 113 6.5E-31 T 14-10-2018 AMBLS11_05620 d5496bd582e11dfe340f8927be20e8d6 116 Pfam PF00462 Glutaredoxin 22 86 1.5E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMBLS11_05620 d5496bd582e11dfe340f8927be20e8d6 116 SUPERFAMILY SSF52833 8 109 4.35E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_05620 d5496bd582e11dfe340f8927be20e8d6 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 106 9.2E-46 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related AMBLS11_17480 e32f4248d03bff6f920cc1540cf0a4fa 330 SUPERFAMILY SSF161111 35 227 1.44E-46 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMBLS11_17480 e32f4248d03bff6f920cc1540cf0a4fa 330 SUPERFAMILY SSF160240 233 305 1.31E-6 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMBLS11_17480 e32f4248d03bff6f920cc1540cf0a4fa 330 Gene3D G3DSA:1.20.1510.10 36 225 1.7E-36 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMBLS11_17480 e32f4248d03bff6f920cc1540cf0a4fa 330 Pfam PF01545 Cation efflux family 40 223 7.3E-39 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMBLS11_17480 e32f4248d03bff6f920cc1540cf0a4fa 330 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 37 305 3.9E-55 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMBLS11_18450 c55ebf305b70ad11130b7d27b819f48f 644 Gene3D G3DSA:2.60.120.260 240 389 5.3E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_18450 c55ebf305b70ad11130b7d27b819f48f 644 Gene3D G3DSA:3.40.50.1110 393 547 3.6E-18 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMBLS11_18450 c55ebf305b70ad11130b7d27b819f48f 644 Gene3D G3DSA:3.40.50.1110 106 239 9.7E-6 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMBLS11_18450 c55ebf305b70ad11130b7d27b819f48f 644 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 417 536 5.4E-16 T 14-10-2018 IPR005181 Sialate O-acetylesterase domain AMBLS11_18450 c55ebf305b70ad11130b7d27b819f48f 644 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 107 238 1.5E-7 T 14-10-2018 IPR005181 Sialate O-acetylesterase domain AMBLS11_18450 c55ebf305b70ad11130b7d27b819f48f 644 SUPERFAMILY SSF49785 252 381 4.78E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_18450 c55ebf305b70ad11130b7d27b819f48f 644 SUPERFAMILY SSF52266 106 596 1.56E-70 T 14-10-2018 AMBLS11_08970 f7599fe96c9d81f87ebf1058a8668c30 650 Pfam PF00128 Alpha amylase, catalytic domain 334 490 1.9E-12 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_08970 f7599fe96c9d81f87ebf1058a8668c30 650 Pfam PF00128 Alpha amylase, catalytic domain 108 213 9.3E-10 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_08970 f7599fe96c9d81f87ebf1058a8668c30 650 Gene3D G3DSA:3.20.20.80 35 211 2.6E-25 T 14-10-2018 AMBLS11_08970 f7599fe96c9d81f87ebf1058a8668c30 650 Gene3D G3DSA:3.20.20.80 306 545 3.1E-39 T 14-10-2018 AMBLS11_08970 f7599fe96c9d81f87ebf1058a8668c30 650 SMART SM00642 73 543 1.8E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMBLS11_08970 f7599fe96c9d81f87ebf1058a8668c30 650 SUPERFAMILY SSF51445 66 549 9.46E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_12790 5342f8e87fd49d7850a9f70cfc6d6a45 529 SUPERFAMILY SSF58104 224 525 6.02E-57 T 14-10-2018 AMBLS11_12790 5342f8e87fd49d7850a9f70cfc6d6a45 529 Gene3D G3DSA:1.10.287.950 238 529 3.9E-55 T 14-10-2018 AMBLS11_12790 5342f8e87fd49d7850a9f70cfc6d6a45 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 493 1.9E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_12790 5342f8e87fd49d7850a9f70cfc6d6a45 529 SMART SM00283 268 528 1.6E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_18140 77f3044d22e32a2e209530768452fa0f 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 2.1E-96 T 14-10-2018 AMBLS11_18140 77f3044d22e32a2e209530768452fa0f 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 32.175 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMBLS11_18140 77f3044d22e32a2e209530768452fa0f 292 PIRSF PIRSF000401 1 292 5.9E-91 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMBLS11_18140 77f3044d22e32a2e209530768452fa0f 292 Gene3D G3DSA:3.40.50.150 101 292 5.8E-56 T 14-10-2018 AMBLS11_18140 77f3044d22e32a2e209530768452fa0f 292 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 1.3E-98 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMBLS11_18140 77f3044d22e32a2e209530768452fa0f 292 SUPERFAMILY SSF53335 65 270 9.76E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_05845 46ff35c2881f4fa2eb1165bca14bf413 211 Pfam PF14316 Domain of unknown function (DUF4381) 34 175 2.8E-36 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 AMBLS11_16835 8cba9db971754f1a37bdeb3acac8b820 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 136 2.6E-43 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMBLS11_16835 8cba9db971754f1a37bdeb3acac8b820 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 91 102 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMBLS11_16835 8cba9db971754f1a37bdeb3acac8b820 165 SUPERFAMILY SSF55083 5 158 9.16E-52 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMBLS11_16835 8cba9db971754f1a37bdeb3acac8b820 165 Gene3D G3DSA:3.30.70.560 5 161 1.9E-56 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMBLS11_16835 8cba9db971754f1a37bdeb3acac8b820 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 136 1.2E-37 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMBLS11_04400 e2356718b208f671ac4d4e47c732d87e 506 Pfam PF00854 POT family 87 459 1.6E-59 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AMBLS11_04400 e2356718b208f671ac4d4e47c732d87e 506 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 491 4.1E-113 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AMBLS11_04400 e2356718b208f671ac4d4e47c732d87e 506 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 148 160 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AMBLS11_04400 e2356718b208f671ac4d4e47c732d87e 506 SUPERFAMILY SSF103473 322 495 9.68E-11 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_04400 e2356718b208f671ac4d4e47c732d87e 506 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 75 99 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AMBLS11_04400 e2356718b208f671ac4d4e47c732d87e 506 SUPERFAMILY SSF103473 11 302 1.83E-24 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_04400 e2356718b208f671ac4d4e47c732d87e 506 Gene3D G3DSA:1.20.1250.20 1 496 5.3E-128 T 14-10-2018 AMBLS11_17770 5e980c3c4c5249d7d6a9d5c032a4a441 328 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 325 8.4E-125 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AMBLS11_17770 5e980c3c4c5249d7d6a9d5c032a4a441 328 SUPERFAMILY SSF51679 4 325 1.44E-82 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMBLS11_17770 5e980c3c4c5249d7d6a9d5c032a4a441 328 Pfam PF00296 Luciferase-like monooxygenase 23 302 1.9E-34 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMBLS11_17770 5e980c3c4c5249d7d6a9d5c032a4a441 328 Gene3D G3DSA:3.20.20.30 1 328 3.0E-90 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMBLS11_02250 08cb91f4abdd802f3b530b86e3d1cd0a 153 Gene3D G3DSA:3.10.129.10 10 152 1.7E-38 T 14-10-2018 AMBLS11_02250 08cb91f4abdd802f3b530b86e3d1cd0a 153 SUPERFAMILY SSF54637 8 149 2.78E-22 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_02250 08cb91f4abdd802f3b530b86e3d1cd0a 153 Pfam PF14539 Domain of unknown function (DUF4442) 19 149 5.3E-51 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 AMBLS11_15465 dabc8e94b5484463560e74d7849cc57b 882 SUPERFAMILY SSF56935 40 875 2.11E-96 T 14-10-2018 AMBLS11_15465 dabc8e94b5484463560e74d7849cc57b 882 Pfam PF00593 TonB dependent receptor 360 875 7.8E-33 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_15465 dabc8e94b5484463560e74d7849cc57b 882 Gene3D G3DSA:2.170.130.10 37 178 8.7E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_15465 dabc8e94b5484463560e74d7849cc57b 882 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 174 1.1E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_00710 8371c3b8aa036bb06123b4d14aa116e9 204 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 6 200 41.85 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMBLS11_00710 8371c3b8aa036bb06123b4d14aa116e9 204 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 10 197 1.9E-75 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMBLS11_00710 8371c3b8aa036bb06123b4d14aa116e9 204 Pfam PF00925 GTP cyclohydrolase II 12 173 6.5E-64 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMBLS11_00710 8371c3b8aa036bb06123b4d14aa116e9 204 Gene3D G3DSA:3.40.50.10990 7 177 3.8E-69 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMBLS11_00710 8371c3b8aa036bb06123b4d14aa116e9 204 SUPERFAMILY SSF142695 9 175 6.54E-61 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMBLS11_05400 973c31d9276155a4876e7d2f9acfa691 399 Pfam PF07690 Major Facilitator Superfamily 9 319 2.2E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_05400 973c31d9276155a4876e7d2f9acfa691 399 Gene3D G3DSA:1.20.1250.20 3 377 1.5E-54 T 14-10-2018 AMBLS11_05400 973c31d9276155a4876e7d2f9acfa691 399 SUPERFAMILY SSF103473 3 379 3.01E-65 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_05400 973c31d9276155a4876e7d2f9acfa691 399 PRINTS PR01035 Tetracycline resistance protein signature 10 26 3.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMBLS11_05400 973c31d9276155a4876e7d2f9acfa691 399 PRINTS PR01035 Tetracycline resistance protein signature 40 59 3.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMBLS11_05400 973c31d9276155a4876e7d2f9acfa691 399 PRINTS PR01035 Tetracycline resistance protein signature 158 178 3.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMBLS11_05400 973c31d9276155a4876e7d2f9acfa691 399 PRINTS PR01035 Tetracycline resistance protein signature 98 119 3.3E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMBLS11_04310 7d9c541ae39a57dff82b9abfd7d015d2 286 Pfam PF06629 MltA-interacting protein MipA 41 286 3.1E-39 T 14-10-2018 IPR010583 MltA-interacting MipA AMBLS11_11370 5fc9e1f6c50909f158afc7e6d2999948 241 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 116.089 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AMBLS11_11370 5fc9e1f6c50909f158afc7e6d2999948 241 Gene3D G3DSA:3.60.21.10 4 237 5.4E-15 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMBLS11_11370 5fc9e1f6c50909f158afc7e6d2999948 241 Pfam PF00149 Calcineurin-like phosphoesterase 5 199 1.7E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMBLS11_11370 5fc9e1f6c50909f158afc7e6d2999948 241 SUPERFAMILY SSF56300 5 220 1.65E-28 T 14-10-2018 AMBLS11_11370 5fc9e1f6c50909f158afc7e6d2999948 241 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 232 5.0E-95 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 Gene3D G3DSA:3.30.70.420 113 228 3.7E-110 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 SUPERFAMILY SSF55035 114 228 1.83E-36 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 48 69 6.9E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 168 186 6.9E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 311 332 6.9E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 259 285 6.9E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 79 99 6.9E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 209 234 6.9E-37 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 18 386 2.0E-119 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 Gene3D G3DSA:3.90.770.10 59 372 3.7E-110 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_03435 b0db2ce0bcfb9f5ad482b3d76c0b906c 388 SUPERFAMILY SSF56542 11 375 2.75E-70 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMBLS11_07190 4f86b59882e4e5bc65e8d6f31cdbca16 443 Pfam PF00860 Permease family 21 399 4.1E-49 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMBLS11_07190 4f86b59882e4e5bc65e8d6f31cdbca16 443 PIRSF PIRSF005353 1 443 2.0E-176 T 14-10-2018 IPR026033 Purine permease PbuG-like AMBLS11_06230 0a5d70436cee1ae2009eef6e54f71083 139 SMART SM00116 84 132 1.0E-7 T 14-10-2018 IPR000644 CBS domain AMBLS11_06230 0a5d70436cee1ae2009eef6e54f71083 139 SMART SM00116 10 57 2.4E-8 T 14-10-2018 IPR000644 CBS domain AMBLS11_06230 0a5d70436cee1ae2009eef6e54f71083 139 SUPERFAMILY SSF54631 1 133 8.9E-31 T 14-10-2018 AMBLS11_06230 0a5d70436cee1ae2009eef6e54f71083 139 Gene3D G3DSA:3.10.580.10 1 138 4.2E-33 T 14-10-2018 AMBLS11_06230 0a5d70436cee1ae2009eef6e54f71083 139 Pfam PF00571 CBS domain 78 131 3.0E-14 T 14-10-2018 IPR000644 CBS domain AMBLS11_06230 0a5d70436cee1ae2009eef6e54f71083 139 Pfam PF00571 CBS domain 6 56 5.4E-11 T 14-10-2018 IPR000644 CBS domain AMBLS11_09385 84447b43f3f45f2ee6b4dd311b174ae8 335 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 334 2.8E-135 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AMBLS11_09385 84447b43f3f45f2ee6b4dd311b174ae8 335 Pfam PF01180 Dihydroorotate dehydrogenase 46 334 5.7E-93 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMBLS11_09385 84447b43f3f45f2ee6b4dd311b174ae8 335 PIRSF PIRSF000164 14 335 5.4E-100 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AMBLS11_09385 84447b43f3f45f2ee6b4dd311b174ae8 335 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 291 311 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AMBLS11_09385 84447b43f3f45f2ee6b4dd311b174ae8 335 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AMBLS11_09385 84447b43f3f45f2ee6b4dd311b174ae8 335 SUPERFAMILY SSF51395 3 334 8.79E-104 T 14-10-2018 AMBLS11_09385 84447b43f3f45f2ee6b4dd311b174ae8 335 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 48.821 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AMBLS11_09385 84447b43f3f45f2ee6b4dd311b174ae8 335 Gene3D G3DSA:3.20.20.70 1 335 8.6E-136 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 Pfam PF00270 DEAD/DEAH box helicase 32 197 6.8E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 SUPERFAMILY SSF52540 148 355 9.86E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 557 44.83 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 Gene3D G3DSA:3.40.50.300 216 439 4.5E-50 T 14-10-2018 AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 SMART SM00487 26 224 3.3E-63 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 Gene3D G3DSA:3.30.70.330 485 557 2.9E-13 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 Gene3D G3DSA:3.40.50.300 7 213 3.2E-77 T 14-10-2018 AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 SUPERFAMILY SSF52540 5 210 8.75E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 Pfam PF00271 Helicase conserved C-terminal domain 233 341 1.5E-28 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 Pfam PF03880 DbpA RNA binding domain 485 555 2.4E-23 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AMBLS11_02805 48f8c78af29ea2460d7ca10bcbf3f197 608 SMART SM00490 260 341 2.1E-33 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_14100 331162fff9799295743fbb4b745f1852 416 SUPERFAMILY SSF51556 33 404 1.45E-97 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_14100 331162fff9799295743fbb4b745f1852 416 Gene3D G3DSA:3.20.20.140 31 416 2.6E-123 T 14-10-2018 AMBLS11_14100 331162fff9799295743fbb4b745f1852 416 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 40 396 1.1E-97 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AMBLS11_10310 0592798c9f899e7ad96638b001025f25 284 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 93 261 3.6E-27 T 14-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal AMBLS11_10310 0592798c9f899e7ad96638b001025f25 284 SUPERFAMILY SSF53474 23 262 8.38E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_10310 0592798c9f899e7ad96638b001025f25 284 Gene3D G3DSA:3.40.50.1820 24 281 3.5E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_04815 7f5a542d04421a5436a5ace5b349d992 343 SUPERFAMILY SSF53448 4 224 1.38E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04815 7f5a542d04421a5436a5ace5b349d992 343 Gene3D G3DSA:3.90.550.10 2 255 1.6E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04815 7f5a542d04421a5436a5ace5b349d992 343 Pfam PF00535 Glycosyl transferase family 2 7 142 8.6E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_07400 73acb9f1d9df79c1993a83195ee5552a 365 Pfam PF13579 Glycosyl transferase 4-like domain 16 175 1.5E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMBLS11_07400 73acb9f1d9df79c1993a83195ee5552a 365 Gene3D G3DSA:3.40.50.2000 1 185 3.4E-23 T 14-10-2018 AMBLS11_07400 73acb9f1d9df79c1993a83195ee5552a 365 SUPERFAMILY SSF53756 1 362 3.95E-60 T 14-10-2018 AMBLS11_07400 73acb9f1d9df79c1993a83195ee5552a 365 Gene3D G3DSA:3.40.50.2000 186 321 4.6E-32 T 14-10-2018 AMBLS11_07400 73acb9f1d9df79c1993a83195ee5552a 365 Pfam PF00534 Glycosyl transferases group 1 197 308 4.0E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_13055 7bee12436a1ea580b0d51ab05d5f61cc 531 PIRSF PIRSF001362 296 414 2.3E-13 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMBLS11_13055 7bee12436a1ea580b0d51ab05d5f61cc 531 PIRSF PIRSF001362 420 530 8.3E-7 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMBLS11_13055 7bee12436a1ea580b0d51ab05d5f61cc 531 PIRSF PIRSF001362 1 278 7.8E-30 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMBLS11_13055 7bee12436a1ea580b0d51ab05d5f61cc 531 Gene3D G3DSA:3.20.20.60 411 530 2.3E-20 T 14-10-2018 AMBLS11_13055 7bee12436a1ea580b0d51ab05d5f61cc 531 SUPERFAMILY SSF51621 11 513 1.35E-125 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMBLS11_13055 7bee12436a1ea580b0d51ab05d5f61cc 531 Pfam PF00463 Isocitrate lyase family 316 389 2.4E-10 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMBLS11_13055 7bee12436a1ea580b0d51ab05d5f61cc 531 Pfam PF00463 Isocitrate lyase family 97 268 1.6E-20 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMBLS11_13055 7bee12436a1ea580b0d51ab05d5f61cc 531 Pfam PF00463 Isocitrate lyase family 431 529 1.6E-11 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMBLS11_05855 ee9cba63ecc76bec89832f46d28459bf 318 PIRSF PIRSF002849 1 318 5.0E-126 T 14-10-2018 AMBLS11_05855 ee9cba63ecc76bec89832f46d28459bf 318 Gene3D G3DSA:3.40.50.300 1 202 1.5E-48 T 14-10-2018 AMBLS11_05855 ee9cba63ecc76bec89832f46d28459bf 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 2.9E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMBLS11_05855 ee9cba63ecc76bec89832f46d28459bf 318 Gene3D G3DSA:1.10.8.300 203 315 1.6E-34 T 14-10-2018 AMBLS11_05855 ee9cba63ecc76bec89832f46d28459bf 318 SUPERFAMILY SSF52540 6 290 4.81E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_06180 428801944e45e105bf63478e14cacb55 391 Gene3D G3DSA:3.40.1090.10 17 98 6.9E-10 T 14-10-2018 AMBLS11_06180 428801944e45e105bf63478e14cacb55 391 Gene3D G3DSA:3.40.1090.10 112 270 1.1E-6 T 14-10-2018 AMBLS11_06180 428801944e45e105bf63478e14cacb55 391 Pfam PF01734 Patatin-like phospholipase 30 210 6.4E-13 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMBLS11_06180 428801944e45e105bf63478e14cacb55 391 SUPERFAMILY SSF52151 25 238 1.33E-34 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMBLS11_06590 d9bc2b49ec6a8c7e037923db0ecb03e9 217 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 216 35.651 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AMBLS11_06590 d9bc2b49ec6a8c7e037923db0ecb03e9 217 Gene3D G3DSA:3.40.50.150 1 213 6.0E-53 T 14-10-2018 AMBLS11_06590 d9bc2b49ec6a8c7e037923db0ecb03e9 217 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 194 2.3E-55 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AMBLS11_06590 d9bc2b49ec6a8c7e037923db0ecb03e9 217 PIRSF PIRSF023956 1 217 7.7E-70 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AMBLS11_06590 d9bc2b49ec6a8c7e037923db0ecb03e9 217 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 207 4.4E-72 T 14-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AMBLS11_06590 d9bc2b49ec6a8c7e037923db0ecb03e9 217 SUPERFAMILY SSF53335 1 194 5.51E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_06765 6ee795b21a807bc963376bf3614552bc 158 Gene3D G3DSA:3.40.390.30 2 158 7.8E-53 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AMBLS11_06765 6ee795b21a807bc963376bf3614552bc 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 118 128 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AMBLS11_06765 6ee795b21a807bc963376bf3614552bc 158 SUPERFAMILY SSF55486 24 154 1.56E-48 T 14-10-2018 AMBLS11_06765 6ee795b21a807bc963376bf3614552bc 158 Pfam PF02130 Uncharacterized protein family UPF0054 29 147 8.4E-39 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMBLS11_06765 6ee795b21a807bc963376bf3614552bc 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 152 23.765 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMBLS11_06765 6ee795b21a807bc963376bf3614552bc 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 44 148 3.9E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMBLS11_17955 e76655ee86cbd812c311658fde8c1fa7 440 PRINTS PR00807 Pollen allergen Amb family signature 30 47 1.9E-7 T 14-10-2018 IPR018082 AmbAllergen KEGG: 00040+4.2.2.2 AMBLS11_17955 e76655ee86cbd812c311658fde8c1fa7 440 PRINTS PR00807 Pollen allergen Amb family signature 53 78 1.9E-7 T 14-10-2018 IPR018082 AmbAllergen KEGG: 00040+4.2.2.2 AMBLS11_17955 e76655ee86cbd812c311658fde8c1fa7 440 Gene3D G3DSA:2.160.20.10 19 333 2.7E-73 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_17955 e76655ee86cbd812c311658fde8c1fa7 440 SUPERFAMILY SSF51126 15 283 4.54E-49 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_17955 e76655ee86cbd812c311658fde8c1fa7 440 Pfam PF00544 Pectate lyase 98 157 1.8E-5 T 14-10-2018 IPR002022 Pectate lyase AMBLS11_05680 065a7bfb515c8290044dc6b207bd4da7 70 PRINTS PR00050 Cold shock protein signature 28 37 4.9E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_05680 065a7bfb515c8290044dc6b207bd4da7 70 PRINTS PR00050 Cold shock protein signature 43 61 4.9E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_05680 065a7bfb515c8290044dc6b207bd4da7 70 PRINTS PR00050 Cold shock protein signature 7 22 4.9E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_05680 065a7bfb515c8290044dc6b207bd4da7 70 Gene3D G3DSA:2.40.50.140 2 68 6.4E-31 T 14-10-2018 AMBLS11_05680 065a7bfb515c8290044dc6b207bd4da7 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 1.7E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMBLS11_05680 065a7bfb515c8290044dc6b207bd4da7 70 PIRSF PIRSF002599 1 70 2.0E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMBLS11_05680 065a7bfb515c8290044dc6b207bd4da7 70 SUPERFAMILY SSF50249 4 69 4.93E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_05680 065a7bfb515c8290044dc6b207bd4da7 70 SMART SM00357 6 70 2.5E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMBLS11_05680 065a7bfb515c8290044dc6b207bd4da7 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 14-10-2018 IPR019844 Cold-shock conserved site AMBLS11_15915 35c7b67d99d6e5a6ada0bddfecb30d13 341 Gene3D G3DSA:3.10.520.20 21 341 5.3E-112 T 14-10-2018 AMBLS11_15915 35c7b67d99d6e5a6ada0bddfecb30d13 341 PIRSF PIRSF006268 3 337 2.6E-94 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AMBLS11_15915 35c7b67d99d6e5a6ada0bddfecb30d13 341 Pfam PF02424 ApbE family 38 315 2.4E-86 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AMBLS11_15915 35c7b67d99d6e5a6ada0bddfecb30d13 341 SUPERFAMILY SSF143631 30 337 2.33E-99 T 14-10-2018 IPR003374 ApbE-like superfamily AMBLS11_18525 916925c415eb539267f25cd00b201ac4 592 SUPERFAMILY SSF54001 43 240 1.33E-25 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMBLS11_18525 916925c415eb539267f25cd00b201ac4 592 Gene3D G3DSA:3.90.70.10 4 240 5.3E-51 T 14-10-2018 AMBLS11_18525 916925c415eb539267f25cd00b201ac4 592 SUPERFAMILY SSF53474 403 482 6.12E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_18525 916925c415eb539267f25cd00b201ac4 592 Pfam PF00112 Papain family cysteine protease 43 220 5.5E-6 T 14-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 Pfam PF00072 Response regulator receiver domain 4 116 2.6E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 4.5E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 Gene3D G3DSA:3.40.50.12740 2 210 1.5E-46 T 14-10-2018 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 SUPERFAMILY SSF52172 1 132 1.57E-24 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 6.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 6.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 6.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 SMART SM00448 2 116 1.4E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 SUPERFAMILY SSF46894 141 208 7.48E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_10040 cd09c907e1266fec8c670de2c7e5fa45 211 SMART SM00421 148 205 2.4E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14315 cbf4c41e96956ae187d4ee2aaefbfdbc 58 Pfam PF12065 Protein of unknown function (DUF3545) 2 56 2.4E-23 T 14-10-2018 IPR021932 Protein of unknown function DUF3545 AMBLS11_00080 9b5b8af7e60cac20308589bc888e13be 483 PIRSF PIRSF006247 1 483 1.1E-179 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AMBLS11_00080 9b5b8af7e60cac20308589bc888e13be 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 5.1E-112 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AMBLS11_00080 9b5b8af7e60cac20308589bc888e13be 483 Pfam PF02386 Cation transport protein 39 477 9.0E-88 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AMBLS11_08960 ed5a8b83e3c2fb7d70d71607609eb9fa 301 Gene3D G3DSA:3.40.630.30 51 256 2.0E-41 T 14-10-2018 AMBLS11_08960 ed5a8b83e3c2fb7d70d71607609eb9fa 301 Pfam PF13444 Acetyltransferase (GNAT) domain 65 162 1.6E-13 T 14-10-2018 AMBLS11_08960 ed5a8b83e3c2fb7d70d71607609eb9fa 301 SUPERFAMILY SSF55729 46 250 1.22E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_08960 ed5a8b83e3c2fb7d70d71607609eb9fa 301 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 43 271 6.1E-55 T 14-10-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted AMBLS11_04380 080d91e6089cc7ce9fcca26dcc504c52 429 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 6 111 3.9E-14 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AMBLS11_04380 080d91e6089cc7ce9fcca26dcc504c52 429 SUPERFAMILY SSF48452 162 270 4.27E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_04380 080d91e6089cc7ce9fcca26dcc504c52 429 Gene3D G3DSA:1.25.40.10 38 335 8.3E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_11670 b423714adaec80131285705be363d007 119 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 38 83 8.8E-7 T 14-10-2018 IPR008769 Poly granule associated AMBLS11_11670 b423714adaec80131285705be363d007 119 Gene3D G3DSA:1.20.120.20 1 119 1.6E-5 T 14-10-2018 AMBLS11_09975 d6a9b0b717d60b0562a05fc6666ea989 487 Gene3D G3DSA:3.30.2010.10 75 154 3.9E-8 T 14-10-2018 AMBLS11_09975 d6a9b0b717d60b0562a05fc6666ea989 487 Gene3D G3DSA:1.25.40.10 352 439 5.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09975 d6a9b0b717d60b0562a05fc6666ea989 487 SUPERFAMILY SSF48452 291 461 3.16E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09975 d6a9b0b717d60b0562a05fc6666ea989 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 487 40.97 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AMBLS11_09975 d6a9b0b717d60b0562a05fc6666ea989 487 Gene3D G3DSA:1.25.40.10 244 351 6.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09975 d6a9b0b717d60b0562a05fc6666ea989 487 Pfam PF01435 Peptidase family M48 75 261 1.1E-31 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMBLS11_07600 84432730a5301295212f623e7dd01f3b 271 SUPERFAMILY SSF54637 2 116 4.13E-24 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_07600 84432730a5301295212f623e7dd01f3b 271 Pfam PF13622 Thioesterase-like superfamily 28 268 1.8E-46 T 14-10-2018 AMBLS11_07600 84432730a5301295212f623e7dd01f3b 271 Gene3D G3DSA:3.10.129.90 10 270 7.5E-71 T 14-10-2018 AMBLS11_07600 84432730a5301295212f623e7dd01f3b 271 SUPERFAMILY SSF54637 132 269 1.36E-23 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_17045 452e8d098ba94854afb317e9c539f6f6 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_17045 452e8d098ba94854afb317e9c539f6f6 231 PIRSF PIRSF002155 1 227 2.3E-80 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_17045 452e8d098ba94854afb317e9c539f6f6 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.396 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMBLS11_17045 452e8d098ba94854afb317e9c539f6f6 231 Gene3D G3DSA:3.30.190.20 21 225 3.6E-82 T 14-10-2018 AMBLS11_17045 452e8d098ba94854afb317e9c539f6f6 231 Gene3D G3DSA:3.40.50.790 68 159 3.6E-82 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMBLS11_17045 452e8d098ba94854afb317e9c539f6f6 231 SUPERFAMILY SSF56808 6 225 4.19E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like AMBLS11_17045 452e8d098ba94854afb317e9c539f6f6 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.5E-106 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMBLS11_17045 452e8d098ba94854afb317e9c539f6f6 231 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 2.4E-55 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMBLS11_11280 839944fd1aa61cb75cdfe68ac5e35e12 185 SUPERFAMILY SSF53474 10 163 3.45E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_11280 839944fd1aa61cb75cdfe68ac5e35e12 185 Gene3D G3DSA:3.40.50.1820 4 180 6.8E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_11280 839944fd1aa61cb75cdfe68ac5e35e12 185 Pfam PF00561 alpha/beta hydrolase fold 29 114 1.4E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_03725 5cfd596c506cf9be43d51692a4a0b8dd 487 Pfam PF02080 TrkA-C domain 415 473 8.3E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMBLS11_03725 5cfd596c506cf9be43d51692a4a0b8dd 487 Gene3D G3DSA:1.20.1530.20 4 389 3.4E-17 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMBLS11_03725 5cfd596c506cf9be43d51692a4a0b8dd 487 Gene3D G3DSA:3.30.70.1450 391 483 1.9E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_03725 5cfd596c506cf9be43d51692a4a0b8dd 487 Pfam PF00999 Sodium/hydrogen exchanger family 10 385 1.3E-47 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMBLS11_03725 5cfd596c506cf9be43d51692a4a0b8dd 487 SUPERFAMILY SSF116726 408 480 7.46E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMBLS11_08215 ea4d3d995cd6906fcf38470d4cdfc043 244 Pfam PF01925 Sulfite exporter TauE/SafE 6 232 1.1E-20 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMBLS11_15980 00467bb4180006d8de91c0e83977cd69 227 Pfam PF01965 DJ-1/PfpI family 27 217 7.5E-17 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMBLS11_15980 00467bb4180006d8de91c0e83977cd69 227 SUPERFAMILY SSF52317 1 226 6.28E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_15980 00467bb4180006d8de91c0e83977cd69 227 Gene3D G3DSA:3.40.50.880 1 227 1.8E-78 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_00940 f4a00b9ca6d595c982eafca871e4ad9e 194 Gene3D G3DSA:2.40.50.140 2 122 1.7E-49 T 14-10-2018 AMBLS11_00940 f4a00b9ca6d595c982eafca871e4ad9e 194 Pfam PF00436 Single-strand binding protein family 6 109 1.3E-44 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AMBLS11_00940 f4a00b9ca6d595c982eafca871e4ad9e 194 Hamap MF_00984 Single-stranded DNA-binding protein. 6 113 39.061 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMBLS11_00940 f4a00b9ca6d595c982eafca871e4ad9e 194 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 4 194 7.9E-61 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMBLS11_00940 f4a00b9ca6d595c982eafca871e4ad9e 194 SUPERFAMILY SSF50249 5 194 1.37E-57 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_10495 f75b5d1ad2227e83c3e09d56f0075d6e 288 ProSitePatterns PS00770 Aminotransferases class-IV signature. 186 215 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AMBLS11_10495 f75b5d1ad2227e83c3e09d56f0075d6e 288 Pfam PF01063 Amino-transferase class IV 30 260 1.2E-45 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMBLS11_10495 f75b5d1ad2227e83c3e09d56f0075d6e 288 Gene3D G3DSA:3.20.10.10 127 287 1.1E-50 T 14-10-2018 AMBLS11_10495 f75b5d1ad2227e83c3e09d56f0075d6e 288 Gene3D G3DSA:3.30.470.10 1 121 1.8E-30 T 14-10-2018 AMBLS11_10495 f75b5d1ad2227e83c3e09d56f0075d6e 288 SUPERFAMILY SSF56752 3 284 1.05E-68 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMBLS11_16070 41654c4246c94926ea41109a40a64f19 343 PIRSF PIRSF039012 4 323 1.9E-87 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AMBLS11_16070 41654c4246c94926ea41109a40a64f19 343 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 46 315 9.6E-58 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AMBLS11_16070 41654c4246c94926ea41109a40a64f19 343 Gene3D G3DSA:3.40.630.10 16 318 6.8E-89 T 14-10-2018 AMBLS11_16070 41654c4246c94926ea41109a40a64f19 343 SUPERFAMILY SSF53187 21 316 9.92E-73 T 14-10-2018 AMBLS11_08800 13826e4f628cb2f47146ac2e4eab58a7 175 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 163 3.4E-48 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 AMBLS11_12200 6455760737dd7f5256e6787379375e28 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.2E-70 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMBLS11_12200 6455760737dd7f5256e6787379375e28 149 Pfam PF03477 ATP cone domain 50 136 1.5E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AMBLS11_12200 6455760737dd7f5256e6787379375e28 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 87.137 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMBLS11_16380 926c26ffd6cf1f5a836435192fc10100 166 Gene3D G3DSA:3.30.160.20 1 73 1.4E-32 T 14-10-2018 AMBLS11_16380 926c26ffd6cf1f5a836435192fc10100 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMBLS11_16380 926c26ffd6cf1f5a836435192fc10100 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 35.131 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMBLS11_16380 926c26ffd6cf1f5a836435192fc10100 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 74 2.2E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMBLS11_16380 926c26ffd6cf1f5a836435192fc10100 166 Gene3D G3DSA:3.30.230.10 74 166 9.6E-38 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_16380 926c26ffd6cf1f5a836435192fc10100 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.7E-69 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMBLS11_16380 926c26ffd6cf1f5a836435192fc10100 166 SUPERFAMILY SSF54768 8 76 4.29E-24 T 14-10-2018 AMBLS11_16380 926c26ffd6cf1f5a836435192fc10100 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.2E-30 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AMBLS11_16380 926c26ffd6cf1f5a836435192fc10100 166 SUPERFAMILY SSF54211 79 158 1.77E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_00150 2edcc56bf6fd4b4e552f92fe4781aef4 143 Pfam PF01152 Bacterial-like globin 23 140 3.1E-31 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 AMBLS11_00150 2edcc56bf6fd4b4e552f92fe4781aef4 143 SUPERFAMILY SSF46458 21 141 1.12E-32 T 14-10-2018 IPR009050 Globin-like superfamily AMBLS11_00150 2edcc56bf6fd4b4e552f92fe4781aef4 143 Gene3D G3DSA:1.10.490.10 16 143 4.7E-41 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMBLS11_01820 352a3d02ac3b790964c90a66b483588b 217 SUPERFAMILY SSF55144 60 200 6.45E-33 T 14-10-2018 IPR009097 Cyclic phosphodiesterase AMBLS11_01820 352a3d02ac3b790964c90a66b483588b 217 Gene3D G3DSA:3.90.1140.10 1 201 4.8E-35 T 14-10-2018 AMBLS11_01820 352a3d02ac3b790964c90a66b483588b 217 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 200 19.847 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AMBLS11_01820 352a3d02ac3b790964c90a66b483588b 217 Pfam PF02834 LigT like Phosphoesterase 62 110 1.0E-7 T 14-10-2018 IPR014051 Phosphoesterase, HXTX AMBLS11_01820 352a3d02ac3b790964c90a66b483588b 217 Pfam PF02834 LigT like Phosphoesterase 118 192 2.1E-6 T 14-10-2018 IPR014051 Phosphoesterase, HXTX AMBLS11_01820 352a3d02ac3b790964c90a66b483588b 217 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 62 200 5.1E-30 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AMBLS11_16415 4616bdef8df151b103f6b2a605059bba 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.011 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMBLS11_16415 4616bdef8df151b103f6b2a605059bba 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.8E-59 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMBLS11_16415 4616bdef8df151b103f6b2a605059bba 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.4E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMBLS11_16415 4616bdef8df151b103f6b2a605059bba 122 Gene3D G3DSA:2.40.150.20 1 122 1.6E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_16415 4616bdef8df151b103f6b2a605059bba 122 SUPERFAMILY SSF50193 1 122 5.36E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AMBLS11_16415 4616bdef8df151b103f6b2a605059bba 122 SMART SM01374 1 122 8.4E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMBLS11_08185 3f9c16efbbb0309ed054885e7853b862 153 Gene3D G3DSA:3.10.590.10 1 153 1.2E-62 T 14-10-2018 AMBLS11_08185 3f9c16efbbb0309ed054885e7853b862 153 Pfam PF01878 EVE domain 2 150 7.1E-55 T 14-10-2018 IPR002740 EVE domain AMBLS11_08185 3f9c16efbbb0309ed054885e7853b862 153 SUPERFAMILY SSF88697 1 151 1.49E-60 T 14-10-2018 IPR015947 PUA-like superfamily AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 9.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 9.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 9.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 Gene3D G3DSA:3.40.50.12740 8 206 7.0E-50 T 14-10-2018 AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 SMART SM00448 7 121 2.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 SUPERFAMILY SSF52172 7 134 3.27E-27 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 Pfam PF00072 Response regulator receiver domain 9 121 1.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 SMART SM00421 143 200 6.4E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 3.7E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMBLS11_14535 fca87a2c7c91d464a31c2ee5a057d18b 206 SUPERFAMILY SSF46894 132 206 2.52E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 Pfam PF13377 Periplasmic binding protein-like domain 173 338 5.3E-33 T 14-10-2018 AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 SMART SM00354 2 72 3.7E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 Gene3D G3DSA:3.40.50.2300 165 294 2.3E-63 T 14-10-2018 AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 SUPERFAMILY SSF47413 3 58 1.75E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 Gene3D G3DSA:1.10.260.40 2 56 5.1E-22 T 14-10-2018 AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 Gene3D G3DSA:3.40.50.2300 57 310 2.3E-63 T 14-10-2018 AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 SUPERFAMILY SSF53822 63 339 1.14E-63 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 4.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 4.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_13785 41ec94aba2293c7b6b347d0b2f11d481 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.9E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMBLS11_13710 77b8b45599ca64becb3227a7c95f143e 390 Pfam PF00756 Putative esterase 35 211 1.5E-25 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMBLS11_13710 77b8b45599ca64becb3227a7c95f143e 390 SUPERFAMILY SSF53474 25 260 5.7E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_13710 77b8b45599ca64becb3227a7c95f143e 390 Gene3D G3DSA:3.40.50.1820 25 331 8.6E-79 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_13710 77b8b45599ca64becb3227a7c95f143e 390 SUPERFAMILY SSF48452 295 363 3.8E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09300 28dae06445e95968a69eb7866905e48e 286 SUPERFAMILY SSF54637 114 283 1.3E-52 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_09300 28dae06445e95968a69eb7866905e48e 286 Pfam PF13622 Thioesterase-like superfamily 24 281 1.6E-61 T 14-10-2018 AMBLS11_09300 28dae06445e95968a69eb7866905e48e 286 Gene3D G3DSA:3.10.129.90 3 284 6.6E-100 T 14-10-2018 AMBLS11_09300 28dae06445e95968a69eb7866905e48e 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 10 282 5.6E-89 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 AMBLS11_09300 28dae06445e95968a69eb7866905e48e 286 SUPERFAMILY SSF54637 4 112 3.2E-40 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_13150 829a3d177978881c11f81d993c65c7b0 527 Gene3D G3DSA:2.160.20.10 142 524 4.4E-14 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_13150 829a3d177978881c11f81d993c65c7b0 527 SUPERFAMILY SSF51126 158 447 1.23E-17 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_18575 a82db2cf1cf251cf90707fd901726aa3 238 Pfam PF13489 Methyltransferase domain 69 174 3.2E-10 T 14-10-2018 AMBLS11_18575 a82db2cf1cf251cf90707fd901726aa3 238 SUPERFAMILY SSF53335 71 220 4.45E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_18575 a82db2cf1cf251cf90707fd901726aa3 238 Gene3D G3DSA:3.40.50.150 57 237 3.2E-20 T 14-10-2018 AMBLS11_13100 cc76d8ea61b3d41bf721c6f5a0110234 298 Pfam PF00899 ThiF family 9 265 7.8E-39 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMBLS11_13100 cc76d8ea61b3d41bf721c6f5a0110234 298 SUPERFAMILY SSF69572 4 279 1.7E-48 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMBLS11_16520 6b5ee2af5a46aa1870a00e3f35481f01 341 SUPERFAMILY SSF53850 51 250 4.96E-13 T 14-10-2018 AMBLS11_16520 6b5ee2af5a46aa1870a00e3f35481f01 341 Gene3D G3DSA:3.40.190.10 118 214 2.6E-8 T 14-10-2018 AMBLS11_16520 6b5ee2af5a46aa1870a00e3f35481f01 341 Gene3D G3DSA:3.40.190.10 61 250 2.6E-8 T 14-10-2018 AMBLS11_16520 6b5ee2af5a46aa1870a00e3f35481f01 341 SMART SM00062 30 260 0.0094 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_18060 dd7f3ab2a4ad04b674feeb94cd97c850 635 Gene3D G3DSA:2.60.40.1250 52 185 4.1E-41 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AMBLS11_18060 dd7f3ab2a4ad04b674feeb94cd97c850 635 SUPERFAMILY SSF74863 56 170 3.01E-39 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AMBLS11_18060 dd7f3ab2a4ad04b674feeb94cd97c850 635 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 223 423 5.2E-18 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMBLS11_18060 dd7f3ab2a4ad04b674feeb94cd97c850 635 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 28 620 34.435 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AMBLS11_18060 dd7f3ab2a4ad04b674feeb94cd97c850 635 Pfam PF11412 Disulphide bond corrector protein DsbC 58 167 3.4E-30 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMBLS11_18060 dd7f3ab2a4ad04b674feeb94cd97c850 635 Gene3D G3DSA:3.40.30.10 499 621 1.3E-28 T 14-10-2018 AMBLS11_18060 dd7f3ab2a4ad04b674feeb94cd97c850 635 ProSitePatterns PS00194 Thioredoxin family active site. 528 546 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMBLS11_18060 dd7f3ab2a4ad04b674feeb94cd97c850 635 Pfam PF13899 Thioredoxin-like 511 593 8.6E-13 T 14-10-2018 AMBLS11_18060 dd7f3ab2a4ad04b674feeb94cd97c850 635 SUPERFAMILY SSF52833 502 617 5.12E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 Gene3D G3DSA:3.20.20.100 1 267 1.3E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 PRINTS PR00069 Aldo-keto reductase signature 26 50 3.9E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 PRINTS PR00069 Aldo-keto reductase signature 187 211 3.9E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 PRINTS PR00069 Aldo-keto reductase signature 150 179 3.9E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 PRINTS PR00069 Aldo-keto reductase signature 82 100 3.9E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 PRINTS PR00069 Aldo-keto reductase signature 115 132 3.9E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 SUPERFAMILY SSF51430 3 262 2.1E-80 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 PIRSF PIRSF000097 1 267 6.4E-65 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 Pfam PF00248 Aldo/keto reductase family 7 251 1.9E-49 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 30 47 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMBLS11_06570 3038c0e194097d91a7dec34356c7ceec 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMBLS11_09575 6312e7f9df34da650e5edb5ee6edff2e 263 Gene3D G3DSA:1.10.530.10 118 259 3.8E-12 T 14-10-2018 AMBLS11_09575 6312e7f9df34da650e5edb5ee6edff2e 263 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 126 257 1.6E-14 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AMBLS11_10950 7d5dbc963399cbb7d8b7cb2cabe411d8 97 Pfam PF07023 Protein of unknown function (DUF1315) 5 84 5.4E-28 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 AMBLS11_17910 80cbe23c53a51ea6db8240189ecfd01a 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AMBLS11_17910 80cbe23c53a51ea6db8240189ecfd01a 93 Gene3D G3DSA:3.10.50.40 2 92 8.1E-37 T 14-10-2018 AMBLS11_17910 80cbe23c53a51ea6db8240189ecfd01a 93 Pfam PF13616 PPIC-type PPIASE domain 13 89 3.4E-22 T 14-10-2018 AMBLS11_17910 80cbe23c53a51ea6db8240189ecfd01a 93 SUPERFAMILY SSF54534 5 87 3.73E-28 T 14-10-2018 AMBLS11_14780 0a67828b106b988c96ee0b1910bca7ff 149 SUPERFAMILY SSF49503 22 146 7.83E-44 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_14780 0a67828b106b988c96ee0b1910bca7ff 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 25 146 3.0E-40 T 14-10-2018 AMBLS11_14780 0a67828b106b988c96ee0b1910bca7ff 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 22 146 7.4E-27 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AMBLS11_14780 0a67828b106b988c96ee0b1910bca7ff 149 Gene3D G3DSA:2.60.40.420 21 147 1.1E-41 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_14780 0a67828b106b988c96ee0b1910bca7ff 149 TIGRFAM TIGR02695 azurin: azurin 23 147 8.3E-59 T 14-10-2018 IPR014068 Azurin AMBLS11_09145 63e8a6b49c908cb0a339b53f3d766c8a 254 SUPERFAMILY SSF53850 47 251 1.01E-37 T 14-10-2018 AMBLS11_09145 63e8a6b49c908cb0a339b53f3d766c8a 254 Pfam PF03466 LysR substrate binding domain 47 251 3.3E-34 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_09145 63e8a6b49c908cb0a339b53f3d766c8a 254 Gene3D G3DSA:3.40.190.290 50 251 1.1E-52 T 14-10-2018 AMBLS11_16540 f1d3aec6c962fc81b29c30c49fe24ae0 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 12 325 8.5E-79 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMBLS11_14405 1154534549f13be1b538c7184bbef63a 132 Gene3D G3DSA:3.40.50.2300 3 127 3.2E-28 T 14-10-2018 AMBLS11_14405 1154534549f13be1b538c7184bbef63a 132 SMART SM00448 3 115 9.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_14405 1154534549f13be1b538c7184bbef63a 132 SUPERFAMILY SSF52172 3 118 1.41E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_14405 1154534549f13be1b538c7184bbef63a 132 Pfam PF00072 Response regulator receiver domain 5 115 5.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_18325 505f6ef19c54fba6d08d3e490b6e3d1b 664 Pfam PF13632 Glycosyl transferase family group 2 228 419 4.8E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_18325 505f6ef19c54fba6d08d3e490b6e3d1b 664 Gene3D G3DSA:3.90.550.10 121 357 2.1E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_18325 505f6ef19c54fba6d08d3e490b6e3d1b 664 SUPERFAMILY SSF53448 129 407 2.63E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_09630 9fa65d559605d536dfabcf872f7c2a18 186 Gene3D G3DSA:1.10.443.10 8 184 5.8E-29 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMBLS11_09630 9fa65d559605d536dfabcf872f7c2a18 186 SUPERFAMILY SSF56349 25 182 7.65E-32 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMBLS11_09630 9fa65d559605d536dfabcf872f7c2a18 186 Pfam PF00589 Phage integrase family 25 170 2.2E-19 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMBLS11_15785 85292a0362717cba7bf3c2903d00e44d 124 Pfam PF08000 Bacterial PH domain 3 120 7.5E-44 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain AMBLS11_15785 85292a0362717cba7bf3c2903d00e44d 124 Gene3D G3DSA:2.30.29.50 1 123 4.0E-46 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily AMBLS11_15785 85292a0362717cba7bf3c2903d00e44d 124 SUPERFAMILY SSF50729 7 118 1.84E-38 T 14-10-2018 AMBLS11_10570 9e5d0838e767f23e760665a90cbc11bc 335 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 335 53.825 T 14-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AMBLS11_10570 9e5d0838e767f23e760665a90cbc11bc 335 Pfam PF00174 Oxidoreductase molybdopterin binding domain 109 269 3.6E-30 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AMBLS11_10570 9e5d0838e767f23e760665a90cbc11bc 335 Gene3D G3DSA:3.90.420.10 66 335 2.2E-114 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMBLS11_10570 9e5d0838e767f23e760665a90cbc11bc 335 SUPERFAMILY SSF56524 78 326 2.49E-90 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMBLS11_11150 bd899b24622c137f52102eef1c299c8b 496 Gene3D G3DSA:3.90.1210.30 6 86 3.0E-24 T 14-10-2018 AMBLS11_11150 bd899b24622c137f52102eef1c299c8b 496 Pfam PF08666 SAF domain 14 81 3.1E-13 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMBLS11_11150 bd899b24622c137f52102eef1c299c8b 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 111 495 9.7E-159 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AMBLS11_11150 bd899b24622c137f52102eef1c299c8b 496 SMART SM00858 14 83 3.8E-11 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMBLS11_09770 e587626a48dbdb54eaa76bbbaf2b0786 122 SUPERFAMILY SSF75169 1 122 6.22E-26 T 14-10-2018 IPR027396 DsrEFH-like AMBLS11_09770 e587626a48dbdb54eaa76bbbaf2b0786 122 Pfam PF02635 DsrE/DsrF-like family 4 122 5.9E-15 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AMBLS11_09770 e587626a48dbdb54eaa76bbbaf2b0786 122 Gene3D G3DSA:3.40.1260.10 1 122 1.9E-34 T 14-10-2018 IPR027396 DsrEFH-like AMBLS11_17280 f14d1c772ff01ee9ad9a8d7cf2ddcc8c 383 SMART SM00244 71 231 6.4E-40 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_17280 f14d1c772ff01ee9ad9a8d7cf2ddcc8c 383 Pfam PF12221 Bacterial membrane protein N terminal 1 43 4.2E-11 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal AMBLS11_17280 f14d1c772ff01ee9ad9a8d7cf2ddcc8c 383 SUPERFAMILY SSF117892 104 236 2.48E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily AMBLS11_17280 f14d1c772ff01ee9ad9a8d7cf2ddcc8c 383 PRINTS PR00721 Stomatin signature 78 100 3.9E-5 T 14-10-2018 IPR001972 Stomatin family GO:0016020 AMBLS11_17280 f14d1c772ff01ee9ad9a8d7cf2ddcc8c 383 PRINTS PR00721 Stomatin signature 125 146 3.9E-5 T 14-10-2018 IPR001972 Stomatin family GO:0016020 AMBLS11_17280 f14d1c772ff01ee9ad9a8d7cf2ddcc8c 383 PRINTS PR00721 Stomatin signature 207 225 3.9E-5 T 14-10-2018 IPR001972 Stomatin family GO:0016020 AMBLS11_17280 f14d1c772ff01ee9ad9a8d7cf2ddcc8c 383 Pfam PF01145 SPFH domain / Band 7 family 75 246 5.5E-26 T 14-10-2018 IPR001107 Band 7 domain AMBLS11_17280 f14d1c772ff01ee9ad9a8d7cf2ddcc8c 383 TIGRFAM TIGR01933 hflK: HflK protein 73 333 4.1E-110 T 14-10-2018 IPR010201 HflK GO:0016021 AMBLS11_17280 f14d1c772ff01ee9ad9a8d7cf2ddcc8c 383 Gene3D G3DSA:3.30.479.30 100 233 1.2E-18 T 14-10-2018 AMBLS11_14525 d5ec11be8e3835be48ed3c3158409cef 109 Pfam PF00893 Small Multidrug Resistance protein 1 93 5.2E-23 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AMBLS11_14525 d5ec11be8e3835be48ed3c3158409cef 109 Gene3D G3DSA:1.10.3730.20 1 107 2.2E-27 T 14-10-2018 AMBLS11_14525 d5ec11be8e3835be48ed3c3158409cef 109 SUPERFAMILY SSF103481 6 104 1.44E-16 T 14-10-2018 AMBLS11_01265 a18ce0680e3450758bcf12a13a3496ad 232 Pfam PF07786 Protein of unknown function (DUF1624) 4 216 5.4E-52 T 14-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 AMBLS11_09805 2b96d6d0d1fc9ab7039455a48b08101d 394 Gene3D G3DSA:2.120.10.30 26 308 1.6E-5 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_09805 2b96d6d0d1fc9ab7039455a48b08101d 394 SUPERFAMILY SSF82171 42 304 6.28E-13 T 14-10-2018 AMBLS11_15710 ab7bb065822b7e9748e5b83125836afd 178 PIRSF PIRSF038996 5 178 4.7E-58 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AMBLS11_15710 ab7bb065822b7e9748e5b83125836afd 178 TIGRFAM TIGR01752 flav_long: flavodoxin 8 177 2.0E-64 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AMBLS11_15710 ab7bb065822b7e9748e5b83125836afd 178 Gene3D G3DSA:3.40.50.360 6 178 2.5E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_15710 ab7bb065822b7e9748e5b83125836afd 178 SUPERFAMILY SSF52218 8 173 8.54E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_15710 ab7bb065822b7e9748e5b83125836afd 178 Pfam PF00258 Flavodoxin 10 169 6.2E-26 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMBLS11_15710 ab7bb065822b7e9748e5b83125836afd 178 ProSitePatterns PS00201 Flavodoxin signature. 10 26 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AMBLS11_13605 eba1eddac9a4d068ff72180b4b290445 136 Gene3D G3DSA:1.20.120.20 17 133 2.2E-5 T 14-10-2018 AMBLS11_13605 eba1eddac9a4d068ff72180b4b290445 136 SUPERFAMILY SSF58113 22 131 3.66E-5 T 14-10-2018 AMBLS11_05160 8d7acaf8d09e921ea9da0721f519c7bf 441 SUPERFAMILY SSF55729 214 379 9.0E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_05160 8d7acaf8d09e921ea9da0721f519c7bf 441 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 13 413 1.5E-131 T 14-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition AMBLS11_05040 d1426e185956fad718374d4241e4cc22 469 Gene3D G3DSA:1.20.120.1380 231 441 2.2E-58 T 14-10-2018 AMBLS11_05040 d1426e185956fad718374d4241e4cc22 469 Gene3D G3DSA:3.40.50.300 253 438 2.2E-58 T 14-10-2018 AMBLS11_05040 d1426e185956fad718374d4241e4cc22 469 SUPERFAMILY SSF52540 259 447 1.39E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_05040 d1426e185956fad718374d4241e4cc22 469 SMART SM00382 256 394 4.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_05040 d1426e185956fad718374d4241e4cc22 469 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 345 7.3E-81 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AMBLS11_05040 d1426e185956fad718374d4241e4cc22 469 Pfam PF00448 SRP54-type protein, GTPase domain 260 447 1.3E-42 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_05040 d1426e185956fad718374d4241e4cc22 469 SMART SM00962 257 450 3.1E-58 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMBLS11_18630 38064aaae14ab8f5c5f1040bec5f0004 195 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 171 3.2E-49 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18630 38064aaae14ab8f5c5f1040bec5f0004 195 SUPERFAMILY SSF110111 52 174 1.2E-42 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18630 38064aaae14ab8f5c5f1040bec5f0004 195 PIRSF PIRSF005413 1 186 1.2E-64 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_18630 38064aaae14ab8f5c5f1040bec5f0004 195 Gene3D G3DSA:2.60.370.10 52 184 5.1E-42 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_02365 c8cbafabbd728b4d6be42246dfca9150 393 Gene3D G3DSA:2.120.10.30 46 393 1.9E-116 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_02365 c8cbafabbd728b4d6be42246dfca9150 393 SUPERFAMILY SSF50952 49 391 7.45E-49 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMBLS11_02365 c8cbafabbd728b4d6be42246dfca9150 393 Pfam PF07995 Glucose / Sorbosone dehydrogenase 62 389 5.5E-128 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMBLS11_17155 dbbd1918924ab22446579a8f68bcd3e4 297 Pfam PF00795 Carbon-nitrogen hydrolase 7 275 6.5E-59 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMBLS11_17155 dbbd1918924ab22446579a8f68bcd3e4 297 Gene3D G3DSA:3.60.110.10 1 296 4.6E-94 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMBLS11_17155 dbbd1918924ab22446579a8f68bcd3e4 297 SUPERFAMILY SSF56317 5 294 3.27E-85 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMBLS11_07265 b027639369ddd165baa5d646072ce723 409 Gene3D G3DSA:3.90.1300.10 16 409 2.5E-94 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMBLS11_07265 b027639369ddd165baa5d646072ce723 409 ProSitePatterns PS00571 Amidases signature. 125 156 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AMBLS11_07265 b027639369ddd165baa5d646072ce723 409 Pfam PF01425 Amidase 287 400 1.4E-10 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMBLS11_07265 b027639369ddd165baa5d646072ce723 409 Pfam PF01425 Amidase 36 209 1.1E-51 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMBLS11_07265 b027639369ddd165baa5d646072ce723 409 SUPERFAMILY SSF75304 33 406 6.15E-87 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMBLS11_09480 ca11e3e0b10598efb3c7c181445ea7ce 157 SUPERFAMILY SSF46626 1 131 3.3E-12 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_09480 ca11e3e0b10598efb3c7c181445ea7ce 157 Gene3D G3DSA:1.10.760.10 1 137 9.5E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_09480 ca11e3e0b10598efb3c7c181445ea7ce 157 Pfam PF00034 Cytochrome c 34 131 3.0E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_00910 bdf39653f3531b8c57c6007789d9bd34 287 SUPERFAMILY SSF53474 17 284 5.11E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_00910 bdf39653f3531b8c57c6007789d9bd34 287 Gene3D G3DSA:3.40.50.1820 54 287 1.1E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07115 379b058a12799321be856dbd5ba6b3a3 214 Pfam PF02525 Flavodoxin-like fold 16 184 1.5E-42 T 14-10-2018 IPR003680 Flavodoxin-like fold AMBLS11_07115 379b058a12799321be856dbd5ba6b3a3 214 Gene3D G3DSA:3.40.50.360 12 192 5.6E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_07115 379b058a12799321be856dbd5ba6b3a3 214 SUPERFAMILY SSF52218 16 191 1.68E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_01665 ecc70911ab3463e5b83e0bdc476795dd 309 SUPERFAMILY SSF51658 58 296 8.15E-55 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMBLS11_01665 ecc70911ab3463e5b83e0bdc476795dd 309 Gene3D G3DSA:3.20.20.150 56 303 2.7E-46 T 14-10-2018 AMBLS11_01665 ecc70911ab3463e5b83e0bdc476795dd 309 Pfam PF01261 Xylose isomerase-like TIM barrel 125 255 6.4E-18 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMBLS11_18490 a984c6c9963b83640563394ec647368b 312 SUPERFAMILY SSF74650 3 309 1.07E-73 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMBLS11_18490 a984c6c9963b83640563394ec647368b 312 Pfam PF01263 Aldose 1-epimerase 3 301 4.7E-55 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMBLS11_18490 a984c6c9963b83640563394ec647368b 312 Gene3D G3DSA:2.70.98.10 1 311 8.1E-75 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMBLS11_07180 ef3ba1ef29a2ac52e23e61afa970d596 309 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 300 5.0E-158 T 14-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 AMBLS11_07180 ef3ba1ef29a2ac52e23e61afa970d596 309 Pfam PF01522 Polysaccharide deacetylase 76 164 1.5E-15 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMBLS11_07180 ef3ba1ef29a2ac52e23e61afa970d596 309 SUPERFAMILY SSF88713 6 300 5.19E-93 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMBLS11_07180 ef3ba1ef29a2ac52e23e61afa970d596 309 Gene3D G3DSA:3.20.20.370 1 306 1.1E-104 T 14-10-2018 AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 249 5.1E-53 T 14-10-2018 AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 SUPERFAMILY SSF51735 3 249 2.25E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.0E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11390 398ecbe91eae0e682613b6eb9920c299 251 Gene3D G3DSA:3.40.50.720 1 250 2.8E-69 T 14-10-2018 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 SUPERFAMILY SSF53474 460 700 1.1E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 SUPERFAMILY SSF50993 43 449 4.71E-88 T 14-10-2018 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 Gene3D G3DSA:3.40.50.1820 64 717 2.3E-247 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 633 648 4.2E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 517 541 4.2E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 545 564 4.2E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 651 673 4.2E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 575 595 4.2E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 491 509 4.2E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 46 446 2.6E-98 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 Pfam PF00326 Prolyl oligopeptidase family 508 721 3.5E-67 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_11675 4d022ca09c74d4cd1126a4e5e8637c5c 725 Gene3D G3DSA:2.130.10.120 115 448 2.3E-247 T 14-10-2018 AMBLS11_06415 5a73b207c0e6f0900da02365d8030ba0 322 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 2 322 35.504 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_06415 5a73b207c0e6f0900da02365d8030ba0 322 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_06415 5a73b207c0e6f0900da02365d8030ba0 322 SMART SM00729 11 216 3.2E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMBLS11_06415 5a73b207c0e6f0900da02365d8030ba0 322 Pfam PF06463 Molybdenum Cofactor Synthesis C 181 305 6.9E-33 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_06415 5a73b207c0e6f0900da02365d8030ba0 322 Gene3D G3DSA:3.20.20.70 1 322 2.2E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_06415 5a73b207c0e6f0900da02365d8030ba0 322 Pfam PF13353 4Fe-4S single cluster domain 18 120 2.2E-8 T 14-10-2018 AMBLS11_06415 5a73b207c0e6f0900da02365d8030ba0 322 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 322 1.2E-98 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMBLS11_06415 5a73b207c0e6f0900da02365d8030ba0 322 Pfam PF04055 Radical SAM superfamily 16 175 7.2E-25 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMBLS11_06415 5a73b207c0e6f0900da02365d8030ba0 322 SUPERFAMILY SSF102114 4 275 1.83E-68 T 14-10-2018 AMBLS11_08530 bdcf87ba54032d75036d810a43153b14 209 SUPERFAMILY SSF53335 4 208 9.31E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_08530 bdcf87ba54032d75036d810a43153b14 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 2.3E-56 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMBLS11_08530 bdcf87ba54032d75036d810a43153b14 209 Gene3D G3DSA:3.40.50.150 30 209 4.7E-62 T 14-10-2018 AMBLS11_08530 bdcf87ba54032d75036d810a43153b14 209 PIRSF PIRSF005461 1 209 7.7E-81 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AMBLS11_08530 bdcf87ba54032d75036d810a43153b14 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 29.377 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AMBLS11_17345 98271666f0f4f415f31c575bc6a578a5 154 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 144 1.4E-48 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AMBLS11_17345 98271666f0f4f415f31c575bc6a578a5 154 Gene3D G3DSA:1.20.120.1370 1 151 1.2E-46 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily AMBLS11_17345 98271666f0f4f415f31c575bc6a578a5 154 PIRSF PIRSF016548 1 153 5.2E-47 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AMBLS11_15815 8fda5d6587f8ac9b86202dce09a91d07 171 SUPERFAMILY SSF54593 10 161 4.83E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_15815 8fda5d6587f8ac9b86202dce09a91d07 171 Gene3D G3DSA:3.10.180.10 4 159 3.1E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_15815 8fda5d6587f8ac9b86202dce09a91d07 171 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 9 170 1.5E-103 T 14-10-2018 IPR019883 Lactoylglutathione lyase AMBLS11_15815 8fda5d6587f8ac9b86202dce09a91d07 171 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 156 9.5E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 Gene3D G3DSA:3.40.50.620 80 222 6.0E-100 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 244 4.0E-44 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 SUPERFAMILY SSF52374 4 291 3.43E-76 T 14-10-2018 AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 Gene3D G3DSA:3.40.50.620 6 282 6.0E-100 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 198 2.6E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 2.6E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 2.6E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 174 184 2.6E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 2.6E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMBLS11_16825 693c508b430ace32ce788ec2bf88abcb 307 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 5 262 2.5E-99 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AMBLS11_16045 9aa3a7862bd1f9c9edd1c7d1a5a506d2 568 Pfam PF00474 Sodium:solute symporter family 375 490 1.3E-14 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_16045 9aa3a7862bd1f9c9edd1c7d1a5a506d2 568 Pfam PF00474 Sodium:solute symporter family 33 303 9.0E-35 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_16045 9aa3a7862bd1f9c9edd1c7d1a5a506d2 568 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 559 2.5E-263 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily AMBLS11_16045 9aa3a7862bd1f9c9edd1c7d1a5a506d2 568 Gene3D G3DSA:1.20.1730.10 8 339 5.5E-38 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMBLS11_16045 9aa3a7862bd1f9c9edd1c7d1a5a506d2 568 Gene3D G3DSA:1.20.1730.10 351 561 4.0E-26 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMBLS11_17495 42d29f4bc99f94bc86e2f3d0aef11385 495 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 464 4.2E-127 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AMBLS11_17495 42d29f4bc99f94bc86e2f3d0aef11385 495 Pfam PF03553 Na+/H+ antiporter family 162 463 1.2E-49 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AMBLS11_00605 208d308e1ee2300aa095618e12d04278 66 Pfam PF06305 Lipopolysaccharide assembly protein A domain 21 60 6.3E-9 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AMBLS11_10895 ed2501e7ba0d112b08307720ff48de9f 150 SMART SM00448 9 134 2.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10895 ed2501e7ba0d112b08307720ff48de9f 150 Pfam PF00072 Response regulator receiver domain 11 133 1.1E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_10895 ed2501e7ba0d112b08307720ff48de9f 150 SUPERFAMILY SSF52172 6 145 1.71E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_10895 ed2501e7ba0d112b08307720ff48de9f 150 Gene3D G3DSA:3.40.50.2300 1 150 9.6E-37 T 14-10-2018 AMBLS11_09290 f244bb06a5c49aae6695eeee03f8da52 292 SUPERFAMILY SSF53335 9 282 2.79E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_09290 f244bb06a5c49aae6695eeee03f8da52 292 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 1.1E-57 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMBLS11_09290 f244bb06a5c49aae6695eeee03f8da52 292 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 274 38.081 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMBLS11_09290 f244bb06a5c49aae6695eeee03f8da52 292 Gene3D G3DSA:3.40.50.150 1 290 4.6E-95 T 14-10-2018 AMBLS11_12630 2a5ccde501137c6671d0243bf98d97e8 187 Pfam PF14341 PilX N-terminal 6 53 4.9E-7 T 14-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain AMBLS11_03400 61c61c60d0614b31d2b5643d7d93069b 237 Pfam PF02565 Recombination protein O C terminal 84 230 2.0E-12 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMBLS11_03400 61c61c60d0614b31d2b5643d7d93069b 237 SUPERFAMILY SSF50249 3 76 1.03E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMBLS11_03400 61c61c60d0614b31d2b5643d7d93069b 237 Gene3D G3DSA:2.40.50.140 3 77 3.5E-31 T 14-10-2018 AMBLS11_03400 61c61c60d0614b31d2b5643d7d93069b 237 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 149 1.5E-28 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMBLS11_03400 61c61c60d0614b31d2b5643d7d93069b 237 Hamap MF_00201 DNA repair protein RecO [recO]. 2 235 18.727 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMBLS11_03400 61c61c60d0614b31d2b5643d7d93069b 237 Pfam PF11967 Recombination protein O N terminal 1 77 2.0E-24 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AMBLS11_03400 61c61c60d0614b31d2b5643d7d93069b 237 SUPERFAMILY SSF57863 86 173 4.45E-7 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger AMBLS11_03400 61c61c60d0614b31d2b5643d7d93069b 237 Gene3D G3DSA:1.20.1440.120 80 236 9.5E-39 T 14-10-2018 AMBLS11_15530 1a6117aee95ebc698458486a77727c6f 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_15530 1a6117aee95ebc698458486a77727c6f 198 Gene3D G3DSA:1.10.10.60 1 51 1.2E-22 T 14-10-2018 AMBLS11_15530 1a6117aee95ebc698458486a77727c6f 198 SUPERFAMILY SSF46689 10 68 2.88E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_15530 1a6117aee95ebc698458486a77727c6f 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMBLS11_15530 1a6117aee95ebc698458486a77727c6f 198 Gene3D G3DSA:1.10.357.10 52 198 4.0E-35 T 14-10-2018 AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 Gene3D G3DSA:3.40.190.10 95 290 2.2E-46 T 14-10-2018 AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 SUPERFAMILY SSF53850 93 296 3.48E-37 T 14-10-2018 AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 Gene3D G3DSA:3.40.190.10 170 267 2.2E-46 T 14-10-2018 AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 Gene3D G3DSA:1.10.10.10 1 86 1.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 SUPERFAMILY SSF46785 4 82 9.04E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 Pfam PF03466 LysR substrate binding domain 97 281 2.1E-22 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_12700 974ac4f03f43db916644e7de2b901311 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 6.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_17870 002767f9fec0259eca65b9b4c3a2fdb2 299 Gene3D G3DSA:1.10.238.10 160 221 3.1E-7 T 14-10-2018 AMBLS11_17870 002767f9fec0259eca65b9b4c3a2fdb2 299 Pfam PF13202 EF hand 262 276 0.086 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 AMBLS11_17870 002767f9fec0259eca65b9b4c3a2fdb2 299 Gene3D G3DSA:1.10.238.10 226 282 3.6E-5 T 14-10-2018 AMBLS11_17870 002767f9fec0259eca65b9b4c3a2fdb2 299 ProSitePatterns PS00018 EF-hand calcium-binding domain. 58 70 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMBLS11_17870 002767f9fec0259eca65b9b4c3a2fdb2 299 Gene3D G3DSA:1.10.238.10 31 136 1.7E-8 T 14-10-2018 AMBLS11_17870 002767f9fec0259eca65b9b4c3a2fdb2 299 SUPERFAMILY SSF47473 33 133 2.21E-12 T 14-10-2018 IPR011992 EF-hand domain pair AMBLS11_17870 002767f9fec0259eca65b9b4c3a2fdb2 299 ProSitePatterns PS00018 EF-hand calcium-binding domain. 244 256 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMBLS11_17870 002767f9fec0259eca65b9b4c3a2fdb2 299 SUPERFAMILY SSF47473 174 279 2.62E-13 T 14-10-2018 IPR011992 EF-hand domain pair AMBLS11_15505 918514027cc424d72487748fd817de28 192 Gene3D G3DSA:1.10.238.10 8 105 2.0E-9 T 14-10-2018 AMBLS11_15505 918514027cc424d72487748fd817de28 192 ProSitePatterns PS00018 EF-hand calcium-binding domain. 145 157 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMBLS11_15505 918514027cc424d72487748fd817de28 192 Pfam PF13202 EF hand 140 158 4.5E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 AMBLS11_15505 918514027cc424d72487748fd817de28 192 Gene3D G3DSA:1.10.238.10 125 190 1.1E-9 T 14-10-2018 AMBLS11_15505 918514027cc424d72487748fd817de28 192 SUPERFAMILY SSF47473 29 190 1.77E-15 T 14-10-2018 IPR011992 EF-hand domain pair AMBLS11_17060 60c15f0a0195f2a19ea161ee076be85e 125 Gene3D G3DSA:1.20.5.1030 64 121 3.7E-16 T 14-10-2018 IPR038379 SecE superfamily AMBLS11_17060 60c15f0a0195f2a19ea161ee076be85e 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 64 119 12.879 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_17060 60c15f0a0195f2a19ea161ee076be85e 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 121 2.0E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMBLS11_17060 60c15f0a0195f2a19ea161ee076be85e 125 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_17060 60c15f0a0195f2a19ea161ee076be85e 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 120 6.8E-20 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMBLS11_17060 60c15f0a0195f2a19ea161ee076be85e 125 PRINTS PR01650 Bacterial translocase SecE signature 107 123 2.3E-32 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMBLS11_17060 60c15f0a0195f2a19ea161ee076be85e 125 PRINTS PR01650 Bacterial translocase SecE signature 42 63 2.3E-32 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMBLS11_17060 60c15f0a0195f2a19ea161ee076be85e 125 PRINTS PR01650 Bacterial translocase SecE signature 63 83 2.3E-32 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMBLS11_17060 60c15f0a0195f2a19ea161ee076be85e 125 PRINTS PR01650 Bacterial translocase SecE signature 87 107 2.3E-32 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMBLS11_02940 d3c33371f610f86f362019b429bd22f5 227 Pfam PF06042 Nucleotidyltransferase 33 221 8.1E-52 T 14-10-2018 IPR009267 Putative nucleotidyltransferase AMBLS11_17750 7f36a35803c5fc7bf213fb2d17794fc0 332 SUPERFAMILY SSF51735 124 298 2.33E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_17750 7f36a35803c5fc7bf213fb2d17794fc0 332 Gene3D G3DSA:3.90.180.10 22 329 3.7E-119 T 14-10-2018 AMBLS11_17750 7f36a35803c5fc7bf213fb2d17794fc0 332 SMART SM00829 19 330 1.7E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_17750 7f36a35803c5fc7bf213fb2d17794fc0 332 SUPERFAMILY SSF50129 1 143 1.43E-35 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_17750 7f36a35803c5fc7bf213fb2d17794fc0 332 Pfam PF00107 Zinc-binding dehydrogenase 159 290 2.1E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMBLS11_17750 7f36a35803c5fc7bf213fb2d17794fc0 332 Pfam PF16884 N-terminal domain of oxidoreductase 5 114 3.8E-35 T 14-10-2018 AMBLS11_17750 7f36a35803c5fc7bf213fb2d17794fc0 332 Gene3D G3DSA:3.40.50.720 126 301 3.7E-119 T 14-10-2018 AMBLS11_14595 df8f096f353bed8d5d08abf009fc2048 184 Pfam PF03703 Bacterial PH domain 100 175 1.3E-15 T 14-10-2018 IPR005182 Domain of unknown function DUF304 AMBLS11_15360 e652af13905d910f2d3f43b35441e38f 377 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMBLS11_15360 e652af13905d910f2d3f43b35441e38f 377 Pfam PF01070 FMN-dependent dehydrogenase 13 375 5.9E-124 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AMBLS11_15360 e652af13905d910f2d3f43b35441e38f 377 PIRSF PIRSF000138 2 377 6.2E-120 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMBLS11_15360 e652af13905d910f2d3f43b35441e38f 377 Gene3D G3DSA:3.20.20.70 2 377 2.7E-123 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_15360 e652af13905d910f2d3f43b35441e38f 377 SUPERFAMILY SSF51395 5 371 4.09E-95 T 14-10-2018 AMBLS11_05955 5ee24e5a82ed684bc0e3a69851e5c520 224 Pfam PF13743 Thioredoxin 8 206 4.7E-17 T 14-10-2018 AMBLS11_05955 5ee24e5a82ed684bc0e3a69851e5c520 224 Gene3D G3DSA:3.40.30.10 9 190 8.5E-49 T 14-10-2018 AMBLS11_05955 5ee24e5a82ed684bc0e3a69851e5c520 224 Gene3D G3DSA:1.10.472.60 45 178 8.5E-49 T 14-10-2018 AMBLS11_05955 5ee24e5a82ed684bc0e3a69851e5c520 224 SUPERFAMILY SSF52833 5 189 5.03E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_13080 65c375a343a0161d435eea831d70427a 282 SUPERFAMILY SSF50494 48 273 1.63E-28 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMBLS11_13080 65c375a343a0161d435eea831d70427a 282 Pfam PF13365 Trypsin-like peptidase domain 78 239 3.6E-20 T 14-10-2018 AMBLS11_13080 65c375a343a0161d435eea831d70427a 282 Gene3D G3DSA:2.40.10.10 47 144 1.6E-10 T 14-10-2018 AMBLS11_13080 65c375a343a0161d435eea831d70427a 282 Gene3D G3DSA:2.40.10.10 148 280 2.2E-17 T 14-10-2018 AMBLS11_13165 91323e86553a094a6fae902127c2c332 306 Pfam PF00535 Glycosyl transferase family 2 7 160 1.7E-35 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_13165 91323e86553a094a6fae902127c2c332 306 SUPERFAMILY SSF53448 6 216 6.09E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_13165 91323e86553a094a6fae902127c2c332 306 Gene3D G3DSA:3.90.550.10 2 253 2.1E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07450 5fa4dc72a12058230f76ffab1b3f428f 789 SUPERFAMILY SSF51126 237 564 2.6E-20 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_07450 5fa4dc72a12058230f76ffab1b3f428f 789 Gene3D G3DSA:2.160.20.10 183 593 1.0E-7 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_07450 5fa4dc72a12058230f76ffab1b3f428f 789 SMART SM00710 305 327 150.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_07450 5fa4dc72a12058230f76ffab1b3f428f 789 SMART SM00710 282 304 710.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_07450 5fa4dc72a12058230f76ffab1b3f428f 789 SMART SM00710 544 565 5900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_07450 5fa4dc72a12058230f76ffab1b3f428f 789 SMART SM00710 453 474 2300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMBLS11_08295 fb84e4b29ea283f1a1be5d8e955b9b98 270 Pfam PF03618 Kinase/pyrophosphorylase 5 260 1.8E-75 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AMBLS11_08295 fb84e4b29ea283f1a1be5d8e955b9b98 270 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 269 76.422 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AMBLS11_16200 696ccee4d2663e3456fcb13ea91d3a5f 476 Pfam PF02321 Outer membrane efflux protein 290 465 2.3E-17 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMBLS11_16200 696ccee4d2663e3456fcb13ea91d3a5f 476 Gene3D G3DSA:1.20.1600.10 29 469 1.8E-45 T 14-10-2018 AMBLS11_16200 696ccee4d2663e3456fcb13ea91d3a5f 476 SUPERFAMILY SSF56954 5 468 2.75E-37 T 14-10-2018 AMBLS11_02705 c45f50bb0a595c299206be68c8d7275b 225 Pfam PF02976 DNA mismatch repair enzyme MutH 56 154 3.0E-30 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AMBLS11_02705 c45f50bb0a595c299206be68c8d7275b 225 SUPERFAMILY SSF52980 6 223 1.77E-68 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMBLS11_02705 c45f50bb0a595c299206be68c8d7275b 225 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 225 129.344 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AMBLS11_02705 c45f50bb0a595c299206be68c8d7275b 225 SMART SM00927 56 154 9.4E-51 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AMBLS11_02705 c45f50bb0a595c299206be68c8d7275b 225 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 9 220 9.6E-87 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AMBLS11_02705 c45f50bb0a595c299206be68c8d7275b 225 Gene3D G3DSA:3.40.600.10 2 223 9.8E-51 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 Pfam PF16448 LapD/MoxY periplasmic domain 23 147 9.6E-40 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 SUPERFAMILY SSF141868 410 642 1.31E-49 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 Gene3D G3DSA:3.30.1040.50 103 151 3.2E-11 T 14-10-2018 AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 389 8.5E-13 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 Gene3D G3DSA:3.20.20.450 404 645 1.1E-52 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 389 7.0E-21 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 SUPERFAMILY SSF55073 243 390 4.63E-18 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 Pfam PF00563 EAL domain 410 640 1.2E-50 T 14-10-2018 IPR001633 EAL domain AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 Gene3D G3DSA:3.30.70.270 222 395 6.8E-27 T 14-10-2018 AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 SMART SM00052 404 645 1.6E-28 T 14-10-2018 IPR001633 EAL domain AMBLS11_07380 c4e736a61654d999f0f92ea9504b30b4 645 SMART SM00267 227 396 1.1E-13 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_09720 dd2b77a3b45e88b8c58628022ca5a2df 487 Pfam PF00155 Aminotransferase class I and II 89 482 5.3E-30 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_09720 dd2b77a3b45e88b8c58628022ca5a2df 487 Gene3D G3DSA:3.90.1150.10 65 483 2.2E-68 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_09720 dd2b77a3b45e88b8c58628022ca5a2df 487 Gene3D G3DSA:3.40.640.10 93 361 2.2E-68 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_09720 dd2b77a3b45e88b8c58628022ca5a2df 487 SUPERFAMILY SSF53383 60 484 1.69E-57 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_13890 943f442224f3b01692c841e6c7ca92ac 274 Pfam PF08668 HDOD domain 15 201 9.6E-41 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMBLS11_13890 943f442224f3b01692c841e6c7ca92ac 274 SUPERFAMILY SSF109604 13 269 4.71E-45 T 14-10-2018 AMBLS11_13890 943f442224f3b01692c841e6c7ca92ac 274 Gene3D G3DSA:1.10.3210.10 1 273 1.3E-47 T 14-10-2018 AMBLS11_18385 ce45b313d3af63f74fd19f2a21bdf087 261 Gene3D G3DSA:3.10.50.40 150 254 1.4E-42 T 14-10-2018 AMBLS11_18385 ce45b313d3af63f74fd19f2a21bdf087 261 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 38 155 1.9E-29 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AMBLS11_18385 ce45b313d3af63f74fd19f2a21bdf087 261 SUPERFAMILY SSF54534 45 251 1.32E-59 T 14-10-2018 AMBLS11_18385 ce45b313d3af63f74fd19f2a21bdf087 261 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 249 1.7E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMBLS11_18385 ce45b313d3af63f74fd19f2a21bdf087 261 Gene3D G3DSA:1.10.287.460 29 148 1.8E-26 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AMBLS11_13970 b09852d367e77265b5f3e45d6f95b808 296 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 220 1.2E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMBLS11_13970 b09852d367e77265b5f3e45d6f95b808 296 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 221 232 1.2E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMBLS11_13970 b09852d367e77265b5f3e45d6f95b808 296 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 153 170 1.2E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMBLS11_13970 b09852d367e77265b5f3e45d6f95b808 296 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 233 248 1.2E-26 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMBLS11_13970 b09852d367e77265b5f3e45d6f95b808 296 Pfam PF01478 Type IV leader peptidase family 146 253 3.3E-25 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMBLS11_13970 b09852d367e77265b5f3e45d6f95b808 296 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 22 134 3.1E-33 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 129 140 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 Pfam PF00311 Phosphoenolpyruvate carboxylase 124 873 7.0E-271 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 529 541 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 240 255 1.4E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 128 141 1.4E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 569 598 1.4E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 701 727 1.4E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 378 398 1.4E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 527 547 1.4E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 181 197 1.4E-66 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 873 17.51 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 SUPERFAMILY SSF51621 11 873 5.18E-302 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMBLS11_15960 e56d1a2b7d27ba08621e969e60fb8fab 873 Gene3D G3DSA:1.20.1440.90 297 381 6.1E-23 T 14-10-2018 AMBLS11_02450 a9756839266576887d2bc52fcc09e5a7 331 Gene3D G3DSA:3.40.50.10490 32 250 3.1E-76 T 14-10-2018 AMBLS11_02450 a9756839266576887d2bc52fcc09e5a7 331 SUPERFAMILY SSF53697 37 281 4.67E-70 T 14-10-2018 AMBLS11_02450 a9756839266576887d2bc52fcc09e5a7 331 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 34 327 41.462 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AMBLS11_02450 a9756839266576887d2bc52fcc09e5a7 331 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 217 234 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AMBLS11_02450 a9756839266576887d2bc52fcc09e5a7 331 Pfam PF13580 SIS domain 68 196 6.8E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMBLS11_02450 a9756839266576887d2bc52fcc09e5a7 331 Gene3D G3DSA:1.10.8.1080 251 329 1.2E-27 T 14-10-2018 AMBLS11_02450 a9756839266576887d2bc52fcc09e5a7 331 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 39 327 2.7E-121 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AMBLS11_02750 418fe6b55f78171090220fad36cd0a43 434 Gene3D G3DSA:1.20.1250.20 6 204 2.2E-10 T 14-10-2018 AMBLS11_02750 418fe6b55f78171090220fad36cd0a43 434 Gene3D G3DSA:1.20.1250.20 225 432 2.5E-9 T 14-10-2018 AMBLS11_02750 418fe6b55f78171090220fad36cd0a43 434 Pfam PF07690 Major Facilitator Superfamily 16 276 9.5E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_02750 418fe6b55f78171090220fad36cd0a43 434 SUPERFAMILY SSF103473 11 431 6.93E-30 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_12055 d40c06ea7e371563ce7dccbe712022b0 276 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 252 274 2.3E-4 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain AMBLS11_10100 f8a3e5ef603578e8f31f8b169d128d5f 278 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 177 7.7E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_10100 f8a3e5ef603578e8f31f8b169d128d5f 278 SUPERFAMILY SSF52540 10 271 2.52E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10100 f8a3e5ef603578e8f31f8b169d128d5f 278 Gene3D G3DSA:3.40.50.300 6 208 4.6E-27 T 14-10-2018 AMBLS11_10100 f8a3e5ef603578e8f31f8b169d128d5f 278 SMART SM00382 25 183 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_18405 12185538affe2ee9767ebaa7bd23dc67 493 Gene3D G3DSA:3.50.50.60 2 492 5.5E-182 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_18405 12185538affe2ee9767ebaa7bd23dc67 493 Pfam PF04820 Tryptophan halogenase 7 456 1.3E-183 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMBLS11_18405 12185538affe2ee9767ebaa7bd23dc67 493 PIRSF PIRSF011396 1 493 2.8E-196 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AMBLS11_18405 12185538affe2ee9767ebaa7bd23dc67 493 SUPERFAMILY SSF51905 6 418 4.26E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_07225 d11e7a075a325b145c3985f870548f06 811 SUPERFAMILY SSF56935 27 811 2.89E-74 T 14-10-2018 AMBLS11_07225 d11e7a075a325b145c3985f870548f06 811 Gene3D G3DSA:2.170.130.10 17 170 3.4E-15 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_07225 d11e7a075a325b145c3985f870548f06 811 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 163 1.7E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_07225 d11e7a075a325b145c3985f870548f06 811 ProSitePatterns PS00018 EF-hand calcium-binding domain. 292 304 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMBLS11_07465 59f69715440360f9253512bb3b25f529 376 Gene3D G3DSA:3.40.50.2000 5 184 1.2E-10 T 14-10-2018 AMBLS11_07465 59f69715440360f9253512bb3b25f529 376 SUPERFAMILY SSF53756 5 373 5.23E-51 T 14-10-2018 AMBLS11_07465 59f69715440360f9253512bb3b25f529 376 Pfam PF13439 Glycosyltransferase Family 4 16 177 8.0E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMBLS11_07465 59f69715440360f9253512bb3b25f529 376 Pfam PF00534 Glycosyl transferases group 1 189 340 8.0E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_07465 59f69715440360f9253512bb3b25f529 376 Gene3D G3DSA:3.40.50.2000 193 363 1.7E-31 T 14-10-2018 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 326 446 2.7E-26 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 184 2.6E-34 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 496 543 2.1E-7 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 Gene3D G3DSA:3.40.120.10 226 323 2.9E-42 T 14-10-2018 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 SUPERFAMILY SSF53738 214 320 3.77E-9 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 SUPERFAMILY SSF55957 439 549 1.7E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 Gene3D G3DSA:3.40.120.10 12 223 1.5E-71 T 14-10-2018 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 SUPERFAMILY SSF53738 310 453 7.06E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 550 6.6E-266 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 215 319 5.8E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 Gene3D G3DSA:3.40.120.10 324 447 1.4E-30 T 14-10-2018 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 SUPERFAMILY SSF53738 25 240 1.67E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 145 154 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMBLS11_06995 4254a764f5a2085817d0d0af4170e9a3 550 Gene3D G3DSA:3.30.310.50 449 550 5.4E-33 T 14-10-2018 AMBLS11_02135 dbe35d5bfdaada3ecdb684cd8117d1ad 325 SUPERFAMILY SSF53474 25 321 5.31E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_02135 dbe35d5bfdaada3ecdb684cd8117d1ad 325 Gene3D G3DSA:3.40.50.1820 24 323 8.0E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_02135 dbe35d5bfdaada3ecdb684cd8117d1ad 325 Pfam PF12146 Serine aminopeptidase, S33 49 305 5.3E-57 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 AMBLS11_10980 d731389a6ef97fae0b398c778e9db9c4 142 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 12 139 2.0E-53 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMBLS11_10980 d731389a6ef97fae0b398c778e9db9c4 142 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 12 135 35.786 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMBLS11_10980 d731389a6ef97fae0b398c778e9db9c4 142 SUPERFAMILY SSF51316 11 138 2.16E-57 T 14-10-2018 IPR011057 Mss4-like superfamily AMBLS11_10980 d731389a6ef97fae0b398c778e9db9c4 142 Gene3D G3DSA:2.170.150.20 1 138 4.9E-60 T 14-10-2018 AMBLS11_10980 d731389a6ef97fae0b398c778e9db9c4 142 Pfam PF01641 SelR domain 15 133 1.1E-51 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMBLS11_07080 ebfd29c7f94410b80f02773e10b05a42 142 SMART SM00347 24 130 3.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_07080 ebfd29c7f94410b80f02773e10b05a42 142 Gene3D G3DSA:1.10.10.10 1 141 8.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_07080 ebfd29c7f94410b80f02773e10b05a42 142 SUPERFAMILY SSF46785 3 140 1.16E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_07080 ebfd29c7f94410b80f02773e10b05a42 142 Pfam PF12802 MarR family 30 94 6.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMBLS11_16850 d2539decef640f94fda397e6cf84787d 544 SUPERFAMILY SSF53383 18 523 2.55E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_16850 d2539decef640f94fda397e6cf84787d 544 Gene3D G3DSA:3.90.1150.170 45 518 1.5E-96 T 14-10-2018 AMBLS11_16850 d2539decef640f94fda397e6cf84787d 544 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 60 436 8.4E-47 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AMBLS11_16850 d2539decef640f94fda397e6cf84787d 544 Gene3D G3DSA:3.40.640.10 118 382 1.5E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_16850 d2539decef640f94fda397e6cf84787d 544 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 4 521 9.2E-259 T 14-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AMBLS11_12290 e12b9666a53fce189fd2a2b2a14ffe61 2328 Gene3D G3DSA:1.20.5.320 590 637 1.5E-5 T 14-10-2018 AMBLS11_12290 e12b9666a53fce189fd2a2b2a14ffe61 2328 Gene3D G3DSA:1.20.5.320 744 792 3.3E-9 T 14-10-2018 AMBLS11_12290 e12b9666a53fce189fd2a2b2a14ffe61 2328 Pfam PF13884 Chaperone of endosialidase 2240 2289 6.6E-8 T 14-10-2018 IPR030392 Intramolecular chaperone auto-processing domain AMBLS11_05385 367ea3e088578fd547450c5c4f076f11 165 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 19 139 4.8E-32 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AMBLS11_05385 367ea3e088578fd547450c5c4f076f11 165 SUPERFAMILY SSF55729 12 134 1.05E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_05385 367ea3e088578fd547450c5c4f076f11 165 Pfam PF00583 Acetyltransferase (GNAT) family 28 123 6.0E-18 T 14-10-2018 IPR000182 GNAT domain AMBLS11_05385 367ea3e088578fd547450c5c4f076f11 165 Gene3D G3DSA:3.40.630.30 12 161 2.0E-34 T 14-10-2018 AMBLS11_10590 0222ed6a2ae28a2883d5dd89e694dffc 213 SUPERFAMILY SSF54427 129 181 1.88E-9 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_10590 0222ed6a2ae28a2883d5dd89e694dffc 213 SUPERFAMILY SSF103642 189 209 4.25E-6 T 14-10-2018 AMBLS11_10590 0222ed6a2ae28a2883d5dd89e694dffc 213 Gene3D G3DSA:3.10.450.50 1 102 1.3E-21 T 14-10-2018 AMBLS11_10590 0222ed6a2ae28a2883d5dd89e694dffc 213 Gene3D G3DSA:3.10.450.50 103 211 3.8E-22 T 14-10-2018 AMBLS11_10590 0222ed6a2ae28a2883d5dd89e694dffc 213 SUPERFAMILY SSF54427 23 84 9.79E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_10590 0222ed6a2ae28a2883d5dd89e694dffc 213 Pfam PF02810 SEC-C motif 192 209 9.6E-8 T 14-10-2018 IPR004027 SEC-C motif AMBLS11_07425 470a1e7e4570d632d16566e90a876044 484 Pfam PF13440 Polysaccharide biosynthesis protein 32 321 1.2E-57 T 14-10-2018 AMBLS11_07425 470a1e7e4570d632d16566e90a876044 484 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 324 461 6.6E-9 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMBLS11_16900 0f98a9fa8493e41dd1f496ac6ffc016f 562 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 389 509 8.7E-33 T 14-10-2018 IPR025299 CstA, C-terminal domain AMBLS11_16900 0f98a9fa8493e41dd1f496ac6ffc016f 562 Pfam PF02554 Carbon starvation protein CstA 1 361 5.9E-116 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AMBLS11_11560 bcda314cb70296d14036a52ceef3c1c8 435 Pfam PF02667 Short chain fatty acid transporter 1 434 1.1E-151 T 14-10-2018 IPR006160 Short chain fatty acid transporter AtoE AMBLS11_06510 b40a15a5a0fc9d25fccc365c0ecf70f8 99 Pfam PF03795 YCII-related domain 1 94 3.3E-28 T 14-10-2018 IPR005545 YCII-related AMBLS11_06510 b40a15a5a0fc9d25fccc365c0ecf70f8 99 SUPERFAMILY SSF54909 1 97 1.43E-31 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMBLS11_06510 b40a15a5a0fc9d25fccc365c0ecf70f8 99 Gene3D G3DSA:3.30.70.1060 1 98 1.0E-36 T 14-10-2018 AMBLS11_16870 a8cc201f8cd2ab17813f72c08ce1bbd5 310 SUPERFAMILY SSF52540 4 231 1.41E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_16870 a8cc201f8cd2ab17813f72c08ce1bbd5 310 Gene3D G3DSA:3.40.50.300 1 235 2.3E-66 T 14-10-2018 AMBLS11_16870 a8cc201f8cd2ab17813f72c08ce1bbd5 310 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_16870 a8cc201f8cd2ab17813f72c08ce1bbd5 310 SMART SM00382 29 211 1.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_16870 a8cc201f8cd2ab17813f72c08ce1bbd5 310 Pfam PF00005 ABC transporter 20 164 4.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_05960 a08b1cc15d25b4e53eb0a4a3153a97d7 83 SUPERFAMILY SSF54565 1 79 3.79E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05960 a08b1cc15d25b4e53eb0a4a3153a97d7 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.4E-28 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05960 a08b1cc15d25b4e53eb0a4a3153a97d7 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.558 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05960 a08b1cc15d25b4e53eb0a4a3153a97d7 83 Gene3D G3DSA:3.30.1320.10 1 82 1.4E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_05960 a08b1cc15d25b4e53eb0a4a3153a97d7 83 Pfam PF00886 Ribosomal protein S16 8 68 5.8E-24 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_13640 a2988cc50391fb522120622b9618de18 373 Gene3D G3DSA:3.90.180.10 6 371 1.8E-151 T 14-10-2018 AMBLS11_13640 a2988cc50391fb522120622b9618de18 373 Gene3D G3DSA:3.40.50.720 150 337 1.8E-151 T 14-10-2018 AMBLS11_13640 a2988cc50391fb522120622b9618de18 373 Pfam PF00107 Zinc-binding dehydrogenase 181 262 2.3E-9 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMBLS11_13640 a2988cc50391fb522120622b9618de18 373 SUPERFAMILY SSF50129 16 182 1.69E-22 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_13640 a2988cc50391fb522120622b9618de18 373 SUPERFAMILY SSF51735 144 263 4.58E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_10865 9d2b6936922a3d624b3b7962810dbad3 116 Pfam PF00581 Rhodanese-like domain 26 103 6.0E-8 T 14-10-2018 IPR001763 Rhodanese-like domain AMBLS11_10865 9d2b6936922a3d624b3b7962810dbad3 116 Gene3D G3DSA:3.40.250.10 2 104 2.2E-19 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_10865 9d2b6936922a3d624b3b7962810dbad3 116 SUPERFAMILY SSF52821 15 103 1.44E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMBLS11_03870 9966bc9053daa94b805d871990332c32 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 221 2.6E-60 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMBLS11_03870 9966bc9053daa94b805d871990332c32 238 PIRSF PIRSF003107 7 227 4.7E-60 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMBLS11_03870 9966bc9053daa94b805d871990332c32 238 Gene3D G3DSA:1.20.58.220 1 118 5.6E-36 T 14-10-2018 IPR038078 PhoU-like domain superfamily AMBLS11_03870 9966bc9053daa94b805d871990332c32 238 Gene3D G3DSA:1.20.58.220 123 236 1.5E-25 T 14-10-2018 IPR038078 PhoU-like domain superfamily AMBLS11_03870 9966bc9053daa94b805d871990332c32 238 Pfam PF01895 PhoU domain 131 213 4.5E-14 T 14-10-2018 IPR026022 PhoU domain AMBLS11_03870 9966bc9053daa94b805d871990332c32 238 Pfam PF01895 PhoU domain 26 112 3.4E-18 T 14-10-2018 IPR026022 PhoU domain AMBLS11_03870 9966bc9053daa94b805d871990332c32 238 SUPERFAMILY SSF109755 13 233 1.26E-62 T 14-10-2018 AMBLS11_09880 3508d0d14da847e9926a797662750051 223 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 35.083 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMBLS11_09880 3508d0d14da847e9926a797662750051 223 Gene3D G3DSA:3.40.50.300 2 223 1.9E-84 T 14-10-2018 AMBLS11_09880 3508d0d14da847e9926a797662750051 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 217 1.1E-81 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMBLS11_09880 3508d0d14da847e9926a797662750051 223 Pfam PF02224 Cytidylate kinase 7 219 7.8E-77 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMBLS11_09880 3508d0d14da847e9926a797662750051 223 SUPERFAMILY SSF52540 5 222 4.99E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13620 3438ca73240130ddfeaa8eb73b319251 224 Gene3D G3DSA:3.40.109.10 9 223 9.8E-54 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMBLS11_13620 3438ca73240130ddfeaa8eb73b319251 224 Pfam PF00881 Nitroreductase family 32 200 1.1E-22 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMBLS11_13620 3438ca73240130ddfeaa8eb73b319251 224 SUPERFAMILY SSF55469 18 223 8.25E-43 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMBLS11_03880 9e573d65783936a43c21cc26a7902105 325 SUPERFAMILY SSF52402 4 143 5.94E-19 T 14-10-2018 AMBLS11_03880 9e573d65783936a43c21cc26a7902105 325 Gene3D G3DSA:3.40.50.12370 1 325 1.7E-84 T 14-10-2018 AMBLS11_03880 9e573d65783936a43c21cc26a7902105 325 SUPERFAMILY SSF52402 150 321 3.6E-19 T 14-10-2018 AMBLS11_03880 9e573d65783936a43c21cc26a7902105 325 Pfam PF00582 Universal stress protein family 4 142 3.9E-13 T 14-10-2018 IPR006016 UspA AMBLS11_03880 9e573d65783936a43c21cc26a7902105 325 Pfam PF00582 Universal stress protein family 178 314 7.5E-13 T 14-10-2018 IPR006016 UspA AMBLS11_11155 c165b56f0bbffce2309cc2fb105211fd 471 Pfam PF02614 Glucuronate isomerase 19 466 8.8E-76 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AMBLS11_11155 c165b56f0bbffce2309cc2fb105211fd 471 Gene3D G3DSA:1.10.2020.10 51 151 1.3E-134 T 14-10-2018 AMBLS11_11155 c165b56f0bbffce2309cc2fb105211fd 471 Hamap MF_00675 Uronate isomerase [uxaC]. 3 470 39.256 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AMBLS11_11155 c165b56f0bbffce2309cc2fb105211fd 471 Gene3D G3DSA:3.20.20.140 20 457 1.3E-134 T 14-10-2018 AMBLS11_11155 c165b56f0bbffce2309cc2fb105211fd 471 SUPERFAMILY SSF51556 5 469 8.5E-154 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 Gene3D G3DSA:3.40.50.300 491 841 1.5E-124 T 14-10-2018 AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 Gene3D G3DSA:1.20.1580.10 95 365 5.4E-167 T 14-10-2018 AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 Gene3D G3DSA:3.40.50.300 10 466 5.4E-167 T 14-10-2018 AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 ProSitePatterns PS00211 ABC transporters family signature. 735 749 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 Gene3D G3DSA:1.20.1580.10 619 776 1.5E-124 T 14-10-2018 AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 ProSitePatterns PS00211 ABC transporters family signature. 365 379 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 SUPERFAMILY SSF52540 8 457 4.37E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 Pfam PF00005 ABC transporter 501 765 7.2E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 SUPERFAMILY SSF52540 495 818 1.07E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14340 d2cd0ae6ee132ebb3b6c616263660e89 846 Gene3D G3DSA:1.10.8.280 153 277 5.4E-167 T 14-10-2018 AMBLS11_03250 b0cdd329aae2379dd428a35271841711 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 3.3E-33 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMBLS11_03250 b0cdd329aae2379dd428a35271841711 135 Gene3D G3DSA:3.30.420.270 62 130 7.8E-10 T 14-10-2018 AMBLS11_12795 d3a128615ebf029f03ac7837969ed59f 259 Gene3D G3DSA:3.40.50.300 18 259 2.1E-77 T 14-10-2018 AMBLS11_12795 d3a128615ebf029f03ac7837969ed59f 259 SUPERFAMILY SSF52540 17 257 9.49E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_12795 d3a128615ebf029f03ac7837969ed59f 259 Pfam PF00685 Sulfotransferase domain 24 215 1.3E-21 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 AMBLS11_03970 7a152b577386c7bc96929304e91e7023 1245 SUPERFAMILY SSF52540 1 310 2.57E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_03970 7a152b577386c7bc96929304e91e7023 1245 SUPERFAMILY SSF52540 1 1231 1.24E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_03970 7a152b577386c7bc96929304e91e7023 1245 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1135 1199 6.9E-15 T 14-10-2018 AMBLS11_03970 7a152b577386c7bc96929304e91e7023 1245 Gene3D G3DSA:3.40.50.300 968 1236 4.6E-27 T 14-10-2018 AMBLS11_03970 7a152b577386c7bc96929304e91e7023 1245 Gene3D G3DSA:3.40.50.300 1 306 2.0E-46 T 14-10-2018 AMBLS11_03970 7a152b577386c7bc96929304e91e7023 1245 Pfam PF13476 AAA domain 6 231 1.6E-27 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain AMBLS11_11700 bef388d07f5817bcf8082ad47e37c7e6 164 PIRSF PIRSF006173 1 160 2.6E-52 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AMBLS11_11700 bef388d07f5817bcf8082ad47e37c7e6 164 Pfam PF03692 Putative zinc- or iron-chelating domain 23 103 5.9E-8 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AMBLS11_16735 0c6e235703ecd87a172f922fb8ab6a55 212 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 5.4E-91 T 14-10-2018 IPR021342 Protein of unknown function DUF2959 AMBLS11_13675 efac2d361f5e047e62d64de57a413e8b 149 Pfam PF11215 Protein of unknown function (DUF3010) 1 135 3.7E-55 T 14-10-2018 IPR021378 Protein of unknown function DUF3010 AMBLS11_04720 ca031386bffbab04ac1c98e83cb9b71f 144 PIRSF PIRSF002889 1 142 3.2E-36 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AMBLS11_04720 ca031386bffbab04ac1c98e83cb9b71f 144 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 139 2.8E-33 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AMBLS11_04720 ca031386bffbab04ac1c98e83cb9b71f 144 Pfam PF00460 Flagella basal body rod protein 12 39 1.0E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMBLS11_17290 e23e81335f255eb914402f5a1f2288c2 82 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 3.5E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMBLS11_17290 e23e81335f255eb914402f5a1f2288c2 82 Gene3D G3DSA:2.30.30.100 1 81 8.6E-34 T 14-10-2018 AMBLS11_17290 e23e81335f255eb914402f5a1f2288c2 82 Pfam PF17209 Hfq protein 7 68 2.3E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMBLS11_17290 e23e81335f255eb914402f5a1f2288c2 82 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.752 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMBLS11_17290 e23e81335f255eb914402f5a1f2288c2 82 SUPERFAMILY SSF50182 7 69 1.85E-24 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_13105 32c7d3b816c698db42df80f5089c79af 170 Gene3D G3DSA:2.160.10.10 74 170 3.9E-20 T 14-10-2018 AMBLS11_13105 32c7d3b816c698db42df80f5089c79af 170 PIRSF PIRSF000441 1 170 3.5E-43 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMBLS11_13105 32c7d3b816c698db42df80f5089c79af 170 SUPERFAMILY SSF51161 29 169 3.47E-29 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_14025 1111ecdb25389a4a0c2dbe405bd246c0 256 Gene3D G3DSA:3.40.50.11690 124 251 7.3E-41 T 14-10-2018 AMBLS11_14025 1111ecdb25389a4a0c2dbe405bd246c0 256 Pfam PF03799 Cell division protein FtsQ 127 237 1.9E-23 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB AMBLS11_14025 1111ecdb25389a4a0c2dbe405bd246c0 256 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 24 245 20.487 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 AMBLS11_14025 1111ecdb25389a4a0c2dbe405bd246c0 256 Gene3D G3DSA:3.10.20.310 53 123 6.3E-20 T 14-10-2018 AMBLS11_14025 1111ecdb25389a4a0c2dbe405bd246c0 256 Pfam PF08478 POTRA domain, FtsQ-type 55 123 4.1E-14 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type AMBLS11_09415 d97132befe35fcba90576a236d2e387c 172 Gene3D G3DSA:3.10.129.10 2 172 7.5E-68 T 14-10-2018 AMBLS11_09415 d97132befe35fcba90576a236d2e387c 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 53.009 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_09415 d97132befe35fcba90576a236d2e387c 172 SUPERFAMILY SSF54637 4 169 4.07E-59 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_09415 d97132befe35fcba90576a236d2e387c 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 6.3E-95 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_09415 d97132befe35fcba90576a236d2e387c 172 Pfam PF07977 FabA-like domain 29 158 2.9E-53 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMBLS11_01930 0540cb12a3ca8629fa9bf6cce8630f33 178 SUPERFAMILY SSF111126 1 164 1.41E-36 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily AMBLS11_01930 0540cb12a3ca8629fa9bf6cce8630f33 178 Pfam PF07700 Haem-NO-binding 3 159 2.0E-35 T 14-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AMBLS11_01930 0540cb12a3ca8629fa9bf6cce8630f33 178 Gene3D G3DSA:3.90.1520.10 1 177 8.7E-50 T 14-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AMBLS11_17500 b5376c809c163a109d662dab4b7f6509 224 Pfam PF03783 Curli production assembly/transport component CsgG 45 223 6.1E-27 T 14-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 AMBLS11_17500 b5376c809c163a109d662dab4b7f6509 224 SUPERFAMILY SSF52964 66 148 1.31E-6 T 14-10-2018 AMBLS11_18365 dcc6b4c1d7563b68e8da14fa99ccc37c 370 Pfam PF05359 Domain of Unknown Function (DUF748) 136 273 1.7E-16 T 14-10-2018 IPR008023 Protein of unknown function DUF748 AMBLS11_18675 91033d0a8fbfd2d60c3822d26c1c3289 205 Pfam PF03458 UPF0126 domain 93 163 3.5E-18 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 AMBLS11_18675 91033d0a8fbfd2d60c3822d26c1c3289 205 Pfam PF03458 UPF0126 domain 7 79 1.8E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 AMBLS11_00500 785035b3833365f376906367680d5c99 391 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 7 385 3.7E-71 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AMBLS11_00500 785035b3833365f376906367680d5c99 391 Pfam PF07219 HemY protein N-terminus 29 132 7.1E-23 T 14-10-2018 IPR010817 HemY, N-terminal AMBLS11_00500 785035b3833365f376906367680d5c99 391 SUPERFAMILY SSF48452 92 356 2.24E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_00500 785035b3833365f376906367680d5c99 391 Gene3D G3DSA:1.25.40.10 152 391 8.0E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_15655 e67f5d2c0a9f2c41275803e102352c23 297 SUPERFAMILY SSF69593 55 292 7.98E-28 T 14-10-2018 AMBLS11_15655 e67f5d2c0a9f2c41275803e102352c23 297 Pfam PF01553 Acyltransferase 79 226 4.8E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_15655 e67f5d2c0a9f2c41275803e102352c23 297 SMART SM00563 89 231 8.1E-12 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMBLS11_15035 3d45fb728e092691878962244acd88a6 284 SMART SM00460 174 239 2.2E-16 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_15035 3d45fb728e092691878962244acd88a6 284 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 82 2.7E-20 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal AMBLS11_15035 3d45fb728e092691878962244acd88a6 284 Gene3D G3DSA:3.10.620.30 106 268 4.2E-30 T 14-10-2018 AMBLS11_15035 3d45fb728e092691878962244acd88a6 284 Pfam PF01841 Transglutaminase-like superfamily 151 237 1.3E-17 T 14-10-2018 IPR002931 Transglutaminase-like AMBLS11_15035 3d45fb728e092691878962244acd88a6 284 SUPERFAMILY SSF54001 84 264 1.75E-38 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMBLS11_04845 18a8df7b56184e61395df640f8734d0b 229 Pfam PF02348 Cytidylyltransferase 7 141 8.8E-24 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AMBLS11_04845 18a8df7b56184e61395df640f8734d0b 229 Gene3D G3DSA:3.90.550.10 3 229 2.9E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04845 18a8df7b56184e61395df640f8734d0b 229 SUPERFAMILY SSF53448 3 228 7.17E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_04525 d4c40a7e5342621c689894fe7d93ea17 161 Pfam PF04287 tRNA pseudouridine synthase C 60 154 1.5E-20 T 14-10-2018 IPR023376 YqcC-like domain AMBLS11_04525 d4c40a7e5342621c689894fe7d93ea17 161 SUPERFAMILY SSF158452 55 159 2.48E-22 T 14-10-2018 IPR036814 YqcC-like superfamily AMBLS11_04525 d4c40a7e5342621c689894fe7d93ea17 161 Gene3D G3DSA:1.20.1440.40 53 157 4.9E-22 T 14-10-2018 IPR036814 YqcC-like superfamily AMBLS11_06315 3ccaea64aa0377e681beadd384391a33 420 Pfam PF11814 Peptidase_C39 like family 219 419 3.8E-83 T 14-10-2018 IPR021770 Protein of unknown function DUF3335 AMBLS11_06315 3ccaea64aa0377e681beadd384391a33 420 SUPERFAMILY SSF55729 47 208 1.72E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_06315 3ccaea64aa0377e681beadd384391a33 420 Pfam PF00583 Acetyltransferase (GNAT) family 63 185 4.9E-13 T 14-10-2018 IPR000182 GNAT domain AMBLS11_06315 3ccaea64aa0377e681beadd384391a33 420 Gene3D G3DSA:3.40.630.30 47 213 9.7E-30 T 14-10-2018 AMBLS11_17175 55ad386467a7b1f550706bcabe16d3f5 312 SUPERFAMILY SSF53850 101 272 2.5E-14 T 14-10-2018 AMBLS11_17175 55ad386467a7b1f550706bcabe16d3f5 312 Gene3D G3DSA:3.40.190.10 173 231 2.9E-6 T 14-10-2018 AMBLS11_17175 55ad386467a7b1f550706bcabe16d3f5 312 Gene3D G3DSA:3.40.190.10 232 269 2.9E-6 T 14-10-2018 AMBLS11_02515 9b12ed0dcab0a0327060e80c407c120c 142 Gene3D G3DSA:3.40.630.30 2 138 2.8E-17 T 14-10-2018 AMBLS11_02515 9b12ed0dcab0a0327060e80c407c120c 142 Pfam PF00583 Acetyltransferase (GNAT) family 24 124 6.5E-10 T 14-10-2018 IPR000182 GNAT domain AMBLS11_02515 9b12ed0dcab0a0327060e80c407c120c 142 SUPERFAMILY SSF55729 10 139 7.62E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_07640 13865c4821d1fbe07ad885a1fbb44d37 266 Gene3D G3DSA:3.90.226.10 2 203 1.9E-61 T 14-10-2018 AMBLS11_07640 13865c4821d1fbe07ad885a1fbb44d37 266 SUPERFAMILY SSF52096 2 260 1.35E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_07640 13865c4821d1fbe07ad885a1fbb44d37 266 Gene3D G3DSA:1.10.12.10 204 266 7.7E-23 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMBLS11_07640 13865c4821d1fbe07ad885a1fbb44d37 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 1.1E-51 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMBLS11_14585 a3dfa35c8a1a141c3c9e6874572ba782 525 Gene3D G3DSA:1.20.1730.10 22 523 4.2E-101 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMBLS11_14585 a3dfa35c8a1a141c3c9e6874572ba782 525 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 32 432 4.5E-63 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_14585 a3dfa35c8a1a141c3c9e6874572ba782 525 Pfam PF00474 Sodium:solute symporter family 32 431 1.1E-37 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMBLS11_06195 8f0c3931a33595ca3bf94ac90156137e 119 SUPERFAMILY SSF54593 5 115 5.5E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_06195 8f0c3931a33595ca3bf94ac90156137e 119 Gene3D G3DSA:3.10.180.10 2 118 9.1E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_15925 2dfd827c4aa4f5883ee8e74b25969f65 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 2.2E-55 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMBLS11_15925 2dfd827c4aa4f5883ee8e74b25969f65 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 28.61 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AMBLS11_15925 2dfd827c4aa4f5883ee8e74b25969f65 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 201 4.0E-98 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AMBLS11_15925 2dfd827c4aa4f5883ee8e74b25969f65 202 PIRSF PIRSF006102 1 202 1.9E-60 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMBLS11_00825 5f7152235374f8c041d9281260c4da64 210 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 34.248 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AMBLS11_00825 5f7152235374f8c041d9281260c4da64 210 Gene3D G3DSA:3.40.50.1950 1 208 3.1E-78 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMBLS11_00825 5f7152235374f8c041d9281260c4da64 210 Pfam PF02441 Flavoprotein 5 181 5.5E-24 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AMBLS11_00825 5f7152235374f8c041d9281260c4da64 210 SUPERFAMILY SSF52507 5 201 1.44E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMBLS11_00825 5f7152235374f8c041d9281260c4da64 210 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 200 3.3E-57 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AMBLS11_14135 bad4b20cd1e8c3f9a70757e4126b5326 231 SUPERFAMILY SSF52540 1 212 9.5E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_14135 bad4b20cd1e8c3f9a70757e4126b5326 231 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 181 2.0E-12 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMBLS11_14135 bad4b20cd1e8c3f9a70757e4126b5326 231 PIRSF PIRSF009320 1 219 9.3E-38 T 14-10-2018 AMBLS11_14135 bad4b20cd1e8c3f9a70757e4126b5326 231 Gene3D G3DSA:3.40.50.300 1 212 1.2E-45 T 14-10-2018 AMBLS11_00135 74d0a5741c58bb04408f19763c22eb75 201 Gene3D G3DSA:3.90.870.10 15 200 3.5E-57 T 14-10-2018 AMBLS11_00135 74d0a5741c58bb04408f19763c22eb75 201 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 16 196 9.6E-38 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMBLS11_00135 74d0a5741c58bb04408f19763c22eb75 201 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 19 200 38.274 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AMBLS11_00135 74d0a5741c58bb04408f19763c22eb75 201 SUPERFAMILY SSF55821 20 197 3.05E-49 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMBLS11_00135 74d0a5741c58bb04408f19763c22eb75 201 Pfam PF01300 Telomere recombination 28 200 3.4E-40 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMBLS11_07770 d027ea657d18333cabfd1c61ec091900 516 SMART SM00052 267 508 3.2E-61 T 14-10-2018 IPR001633 EAL domain AMBLS11_07770 d027ea657d18333cabfd1c61ec091900 516 Pfam PF00563 EAL domain 274 503 2.0E-49 T 14-10-2018 IPR001633 EAL domain AMBLS11_07770 d027ea657d18333cabfd1c61ec091900 516 Pfam PF12792 CSS motif domain associated with EAL 42 195 2.1E-22 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AMBLS11_07770 d027ea657d18333cabfd1c61ec091900 516 Gene3D G3DSA:3.20.20.450 265 516 2.5E-65 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_07770 d027ea657d18333cabfd1c61ec091900 516 SUPERFAMILY SSF141868 273 514 1.96E-62 T 14-10-2018 IPR035919 EAL domain superfamily AMBLS11_00275 ce3647ecff1eebec23a8d5e0c990d8f2 243 SUPERFAMILY SSF56112 50 240 1.31E-14 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_00275 ce3647ecff1eebec23a8d5e0c990d8f2 243 Gene3D G3DSA:1.10.510.10 150 243 4.2E-15 T 14-10-2018 AMBLS11_00275 ce3647ecff1eebec23a8d5e0c990d8f2 243 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 35 238 2.1E-50 T 14-10-2018 AMBLS11_00275 ce3647ecff1eebec23a8d5e0c990d8f2 243 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 4 240 33.108 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 SUPERFAMILY SSF54211 568 760 1.1E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 Gene3D G3DSA:3.40.50.300 237 456 2.5E-55 T 14-10-2018 AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 Gene3D G3DSA:3.40.50.300 9 172 4.3E-26 T 14-10-2018 AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 Pfam PF13654 AAA domain 36 543 4.3E-170 T 14-10-2018 AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 Gene3D G3DSA:3.30.230.10 546 781 2.5E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 653 759 1.0E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 SUPERFAMILY SSF52540 37 541 9.56E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 650 669 2.2E-11 T 14-10-2018 AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 710 728 2.2E-11 T 14-10-2018 AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 569 585 2.2E-11 T 14-10-2018 AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 65 84 2.2E-11 T 14-10-2018 AMBLS11_08505 d2ec4797578dbcf3c5480c3789eb218d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 680 699 2.2E-11 T 14-10-2018 AMBLS11_04975 4b0a00f2f3995e877d06ce0972c5afd0 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 141 4.0E-24 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AMBLS11_04975 4b0a00f2f3995e877d06ce0972c5afd0 148 Pfam PF02050 Flagellar FliJ protein 19 140 1.1E-27 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 Pfam PF00970 Oxidoreductase FAD-binding domain 22 111 2.4E-11 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 SUPERFAMILY SSF63380 3 114 2.32E-19 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 Gene3D G3DSA:3.10.20.30 234 327 4.5E-11 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 SUPERFAMILY SSF52343 102 229 7.86E-23 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 SUPERFAMILY SSF54292 228 327 1.02E-14 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 Gene3D G3DSA:3.40.50.80 112 233 1.3E-20 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 Gene3D G3DSA:2.40.30.10 9 108 1.5E-14 T 14-10-2018 AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 106 115 8.2E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 121 140 8.2E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 8.2E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMBLS11_05510 914948402e3700cf35bb0590f8668bd4 327 Pfam PF00175 Oxidoreductase NAD-binding domain 122 215 8.8E-10 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMBLS11_09085 579cfb291d74a3dcdc6c807407d2223a 508 Pfam PF11893 Domain of unknown function (DUF3413) 8 256 1.6E-80 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal AMBLS11_09085 579cfb291d74a3dcdc6c807407d2223a 508 SUPERFAMILY SSF53649 411 456 4.8E-6 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMBLS11_18545 fa61bda275efa8562999df3d47d07eaf 237 SUPERFAMILY SSF53271 50 223 1.38E-16 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMBLS11_18545 fa61bda275efa8562999df3d47d07eaf 237 Gene3D G3DSA:3.40.50.2020 101 231 9.7E-8 T 14-10-2018 AMBLS11_03340 278c0221a3861cfe55d5307a6bc2f70d 674 SMART SM00304 345 397 1.5E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMBLS11_03340 278c0221a3861cfe55d5307a6bc2f70d 674 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 125 1.2E-8 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMBLS11_03340 278c0221a3861cfe55d5307a6bc2f70d 674 Gene3D G3DSA:1.10.287.950 344 674 4.4E-73 T 14-10-2018 AMBLS11_03340 278c0221a3861cfe55d5307a6bc2f70d 674 SMART SM00283 412 673 9.6E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_03340 278c0221a3861cfe55d5307a6bc2f70d 674 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 482 637 3.0E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMBLS11_03340 278c0221a3861cfe55d5307a6bc2f70d 674 SUPERFAMILY SSF58104 365 674 7.32E-73 T 14-10-2018 AMBLS11_15105 1b29b8bc02dd5ba7e332764ff552d7ee 221 Gene3D G3DSA:1.10.10.10 123 221 9.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_15105 1b29b8bc02dd5ba7e332764ff552d7ee 221 SMART SM00448 1 112 8.1E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15105 1b29b8bc02dd5ba7e332764ff552d7ee 221 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-34 T 14-10-2018 AMBLS11_15105 1b29b8bc02dd5ba7e332764ff552d7ee 221 SUPERFAMILY SSF52172 1 175 1.85E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_15105 1b29b8bc02dd5ba7e332764ff552d7ee 221 Pfam PF00072 Response regulator receiver domain 3 112 4.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_15105 1b29b8bc02dd5ba7e332764ff552d7ee 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 5.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_15105 1b29b8bc02dd5ba7e332764ff552d7ee 221 SMART SM00862 145 216 5.0E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMBLS11_15585 b6fb42e22a5c8bba8b01d52617982b51 330 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 10 330 4.4E-149 T 14-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 AMBLS11_15585 b6fb42e22a5c8bba8b01d52617982b51 330 PIRSF PIRSF029693 2 330 7.5E-145 T 14-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 AMBLS11_05645 9a62b33ee1f8c058ba693aa885ae0cad 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 3 51 6.6E-15 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AMBLS11_05645 9a62b33ee1f8c058ba693aa885ae0cad 64 Gene3D G3DSA:1.10.10.1100 1 57 6.1E-21 T 14-10-2018 AMBLS11_07720 dca6f0b5a6f16d56bc8c37c267431a63 397 Pfam PF12833 Helix-turn-helix domain 320 396 1.4E-10 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_07720 dca6f0b5a6f16d56bc8c37c267431a63 397 Gene3D G3DSA:1.10.10.60 297 397 6.7E-13 T 14-10-2018 AMBLS11_07720 dca6f0b5a6f16d56bc8c37c267431a63 397 SMART SM00342 314 396 3.6E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_07720 dca6f0b5a6f16d56bc8c37c267431a63 397 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 71 255 7.6E-10 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AMBLS11_14985 83ccd43d4894ce912e429adfe2863fec 120 Gene3D G3DSA:2.60.120.10 29 120 1.6E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMBLS11_14985 83ccd43d4894ce912e429adfe2863fec 120 SUPERFAMILY SSF51182 33 117 4.58E-7 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMBLS11_11775 fcecf3285c9247e15ea84a28239327a2 242 SUPERFAMILY SSF48317 9 217 2.09E-37 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMBLS11_11775 fcecf3285c9247e15ea84a28239327a2 242 Pfam PF01569 PAP2 superfamily 102 214 1.5E-23 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMBLS11_11775 fcecf3285c9247e15ea84a28239327a2 242 Gene3D G3DSA:1.20.144.10 46 134 1.6E-6 T 14-10-2018 AMBLS11_11775 fcecf3285c9247e15ea84a28239327a2 242 Gene3D G3DSA:1.20.144.10 135 241 7.3E-24 T 14-10-2018 AMBLS11_11775 fcecf3285c9247e15ea84a28239327a2 242 SMART SM00014 100 214 6.6E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMBLS11_14400 4be1a14f9fc2ef075ba4cfc8db0151c9 166 SUPERFAMILY SSF48295 34 115 1.57E-14 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_17605 e2ad8ae1dc647120c2e28d9e81359eb9 265 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 28 265 1.5E-33 T 14-10-2018 IPR005519 Acid phosphatase, class B-like AMBLS11_17605 e2ad8ae1dc647120c2e28d9e81359eb9 265 SUPERFAMILY SSF56784 78 265 1.54E-21 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_17605 e2ad8ae1dc647120c2e28d9e81359eb9 265 Gene3D G3DSA:3.40.50.1000 29 265 5.8E-49 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_08370 c6ee9ccb60a1f8878ba33f3602ae3334 106 Gene3D G3DSA:3.30.1390.10 1 106 2.1E-45 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMBLS11_08370 c6ee9ccb60a1f8878ba33f3602ae3334 106 SUPERFAMILY SSF54736 21 105 1.73E-34 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMBLS11_08370 c6ee9ccb60a1f8878ba33f3602ae3334 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 10 101 28.769 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMBLS11_08370 c6ee9ccb60a1f8878ba33f3602ae3334 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 9.5E-36 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AMBLS11_15420 4cbde8e27166f0698fe41b35517a7e53 483 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMBLS11_15420 4cbde8e27166f0698fe41b35517a7e53 483 Pfam PF00270 DEAD/DEAH box helicase 26 193 1.7E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMBLS11_15420 4cbde8e27166f0698fe41b35517a7e53 483 SUPERFAMILY SSF52540 72 358 9.7E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_15420 4cbde8e27166f0698fe41b35517a7e53 483 Gene3D G3DSA:3.40.50.300 1 209 2.7E-76 T 14-10-2018 AMBLS11_15420 4cbde8e27166f0698fe41b35517a7e53 483 Pfam PF00271 Helicase conserved C-terminal domain 230 338 1.4E-27 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_15420 4cbde8e27166f0698fe41b35517a7e53 483 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 461 48.724 T 14-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AMBLS11_15420 4cbde8e27166f0698fe41b35517a7e53 483 SMART SM00487 20 221 4.9E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_15420 4cbde8e27166f0698fe41b35517a7e53 483 Gene3D G3DSA:3.40.50.300 213 409 4.3E-49 T 14-10-2018 AMBLS11_15420 4cbde8e27166f0698fe41b35517a7e53 483 SMART SM00490 257 338 3.2E-32 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_07830 2208021d2e7f3dfd04d2c4eb97fd3a30 257 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 255 25.579 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMBLS11_07830 2208021d2e7f3dfd04d2c4eb97fd3a30 257 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 245 6.2E-45 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMBLS11_07830 2208021d2e7f3dfd04d2c4eb97fd3a30 257 PIRSF PIRSF015626 1 257 5.3E-66 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMBLS11_07830 2208021d2e7f3dfd04d2c4eb97fd3a30 257 Pfam PF02634 FdhD/NarQ family 24 256 5.3E-63 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMBLS11_07830 2208021d2e7f3dfd04d2c4eb97fd3a30 257 Gene3D G3DSA:3.40.140.10 114 257 1.8E-40 T 14-10-2018 AMBLS11_07830 2208021d2e7f3dfd04d2c4eb97fd3a30 257 SUPERFAMILY SSF53927 10 256 4.51E-66 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMBLS11_07830 2208021d2e7f3dfd04d2c4eb97fd3a30 257 Gene3D G3DSA:3.10.20.10 26 112 2.6E-6 T 14-10-2018 AMBLS11_05935 be6499e6a3c98a497e1a9d6a78d37524 418 SUPERFAMILY SSF53474 88 286 3.6E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_05935 be6499e6a3c98a497e1a9d6a78d37524 418 Pfam PF12146 Serine aminopeptidase, S33 89 288 1.0E-12 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 AMBLS11_05935 be6499e6a3c98a497e1a9d6a78d37524 418 Gene3D G3DSA:3.40.50.1820 81 296 1.1E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_18600 a4b6eff9e428f36db88bcd74bf765d96 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site AMBLS11_18600 a4b6eff9e428f36db88bcd74bf765d96 305 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 300 19.615 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AMBLS11_18600 a4b6eff9e428f36db88bcd74bf765d96 305 Pfam PF01040 UbiA prenyltransferase family 35 283 2.9E-61 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMBLS11_18600 a4b6eff9e428f36db88bcd74bf765d96 305 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 21 299 2.1E-100 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AMBLS11_18600 a4b6eff9e428f36db88bcd74bf765d96 305 Gene3D G3DSA:1.10.357.140 26 184 3.2E-20 T 14-10-2018 AMBLS11_12780 d0c10d4831c30db4db7ec64a07ec2530 339 PRINTS PR01486 Bacterial phospholipase A1 protein signature 195 209 1.4E-25 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMBLS11_12780 d0c10d4831c30db4db7ec64a07ec2530 339 PRINTS PR01486 Bacterial phospholipase A1 protein signature 165 184 1.4E-25 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMBLS11_12780 d0c10d4831c30db4db7ec64a07ec2530 339 PRINTS PR01486 Bacterial phospholipase A1 protein signature 121 138 1.4E-25 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMBLS11_12780 d0c10d4831c30db4db7ec64a07ec2530 339 PRINTS PR01486 Bacterial phospholipase A1 protein signature 210 228 1.4E-25 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMBLS11_12780 d0c10d4831c30db4db7ec64a07ec2530 339 PRINTS PR01486 Bacterial phospholipase A1 protein signature 309 329 1.4E-25 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMBLS11_12780 d0c10d4831c30db4db7ec64a07ec2530 339 Pfam PF02253 Phospholipase A1 75 336 3.4E-88 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMBLS11_12780 d0c10d4831c30db4db7ec64a07ec2530 339 Gene3D G3DSA:2.40.230.10 76 338 1.4E-81 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMBLS11_12780 d0c10d4831c30db4db7ec64a07ec2530 339 SUPERFAMILY SSF56931 78 336 8.24E-85 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMBLS11_15440 3c5de06d161ce961b0338edfc26a22e6 198 Pfam PF13505 Outer membrane protein beta-barrel domain 18 198 8.9E-25 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel AMBLS11_15440 3c5de06d161ce961b0338edfc26a22e6 198 Gene3D G3DSA:2.40.160.20 23 198 2.1E-32 T 14-10-2018 AMBLS11_15440 3c5de06d161ce961b0338edfc26a22e6 198 SUPERFAMILY SSF56925 34 198 2.88E-32 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMBLS11_05470 a82035861d422652f9ee3b0d970a28c4 349 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 309 2.6E-48 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMBLS11_05470 a82035861d422652f9ee3b0d970a28c4 349 Gene3D G3DSA:3.40.50.1100 21 321 1.9E-72 T 14-10-2018 AMBLS11_05470 a82035861d422652f9ee3b0d970a28c4 349 SUPERFAMILY SSF53686 17 332 1.2E-69 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMBLS11_05470 a82035861d422652f9ee3b0d970a28c4 349 Gene3D G3DSA:3.40.50.1100 48 154 1.9E-72 T 14-10-2018 AMBLS11_11445 1d3ea12a9495189ab7e177e6176cb0f6 198 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 184 7.2E-28 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AMBLS11_07460 f4a9a692b877e0a51439eaed4d783567 374 Gene3D G3DSA:3.40.50.2000 192 335 1.3E-27 T 14-10-2018 AMBLS11_07460 f4a9a692b877e0a51439eaed4d783567 374 Pfam PF13439 Glycosyltransferase Family 4 16 178 2.2E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMBLS11_07460 f4a9a692b877e0a51439eaed4d783567 374 Gene3D G3DSA:3.40.50.2000 2 191 6.1E-17 T 14-10-2018 AMBLS11_07460 f4a9a692b877e0a51439eaed4d783567 374 SUPERFAMILY SSF53756 4 371 6.28E-53 T 14-10-2018 AMBLS11_07460 f4a9a692b877e0a51439eaed4d783567 374 Pfam PF00534 Glycosyl transferases group 1 202 312 7.6E-21 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_12030 6f436a06ef27003f976f19f07737c920 112 Pfam PF08985 DP-EP family 12 110 3.6E-13 T 14-10-2018 IPR015078 DP-EP family AMBLS11_12030 6f436a06ef27003f976f19f07737c920 112 SUPERFAMILY SSF49503 6 111 4.5E-9 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_14735 29f074c60ac4da50cc74c68278c6a8bd 330 SUPERFAMILY SSF51735 115 296 9.9E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_14735 29f074c60ac4da50cc74c68278c6a8bd 330 Gene3D G3DSA:3.40.50.720 113 299 3.0E-94 T 14-10-2018 AMBLS11_14735 29f074c60ac4da50cc74c68278c6a8bd 330 Gene3D G3DSA:3.40.50.720 59 322 3.0E-94 T 14-10-2018 AMBLS11_14735 29f074c60ac4da50cc74c68278c6a8bd 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 295 1.9E-48 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMBLS11_04145 6002134178e42913784d780e460d496c 133 Pfam PF03788 LrgA family 19 110 3.5E-19 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 AMBLS11_06595 0420cfa41334400177971099b9859ce3 118 Gene3D G3DSA:3.30.1450.10 30 115 2.3E-24 T 14-10-2018 IPR037873 BamE-like AMBLS11_06595 0420cfa41334400177971099b9859ce3 118 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 110 27.504 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE AMBLS11_06595 0420cfa41334400177971099b9859ce3 118 Pfam PF04355 SmpA / OmlA family 31 102 5.0E-25 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AMBLS11_13385 edb769a1cd95c8d365428b6fc5dc7a14 240 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 10 238 5.9E-54 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AMBLS11_13385 edb769a1cd95c8d365428b6fc5dc7a14 240 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 30 238 2.2E-20 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AMBLS11_07455 37177fca6f024bdfe5f076dcb61822d7 365 Gene3D G3DSA:3.40.50.2000 2 191 1.5E-11 T 14-10-2018 AMBLS11_07455 37177fca6f024bdfe5f076dcb61822d7 365 Pfam PF13439 Glycosyltransferase Family 4 18 184 3.3E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMBLS11_07455 37177fca6f024bdfe5f076dcb61822d7 365 Pfam PF13692 Glycosyl transferases group 1 200 335 6.7E-27 T 14-10-2018 AMBLS11_07455 37177fca6f024bdfe5f076dcb61822d7 365 Gene3D G3DSA:3.40.50.2000 192 338 2.3E-32 T 14-10-2018 AMBLS11_07455 37177fca6f024bdfe5f076dcb61822d7 365 SUPERFAMILY SSF53756 13 364 5.71E-55 T 14-10-2018 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.0E-37 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 SUPERFAMILY SSF64518 1 280 9.68E-91 T 14-10-2018 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 Pfam PF00700 Bacterial flagellin C-terminal helical region 196 280 1.5E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 Gene3D G3DSA:1.10.8.410 234 280 6.4E-22 T 14-10-2018 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 Gene3D G3DSA:1.20.1330.10 189 233 1.7E-16 T 14-10-2018 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 Gene3D G3DSA:1.20.1330.10 45 176 9.1E-74 T 14-10-2018 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 Gene3D G3DSA:1.20.58.1830 5 33 9.1E-74 T 14-10-2018 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 PRINTS PR00207 Flagellin signature 37 54 7.3E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 PRINTS PR00207 Flagellin signature 111 134 7.3E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_04780 92eeb8b356c7f652ff6efb0b5f47d9cd 281 PRINTS PR00207 Flagellin signature 76 95 7.3E-23 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMBLS11_14265 ed2cd7062ab404ba8e0b6cf4ee70e9a8 180 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 168 179 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMBLS11_14265 ed2cd7062ab404ba8e0b6cf4ee70e9a8 180 SUPERFAMILY SSF49329 38 179 7.98E-50 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMBLS11_14265 ed2cd7062ab404ba8e0b6cf4ee70e9a8 180 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 43 179 9.5E-35 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMBLS11_14265 ed2cd7062ab404ba8e0b6cf4ee70e9a8 180 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 72 82 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMBLS11_14265 ed2cd7062ab404ba8e0b6cf4ee70e9a8 180 Gene3D G3DSA:2.60.40.200 29 180 3.9E-51 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMBLS11_03370 e468ac02c946e8151a42c3ee90049ff1 750 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 728 19.779 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AMBLS11_03370 e468ac02c946e8151a42c3ee90049ff1 750 Pfam PF03968 OstA-like protein 59 187 3.3E-11 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AMBLS11_03370 e468ac02c946e8151a42c3ee90049ff1 750 Pfam PF04453 Organic solvent tolerance protein 299 659 1.2E-92 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AMBLS11_08965 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF01548 Transposase 7 146 2.1E-11 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_08965 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 7.1E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMBLS11_09000 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF01548 Transposase 7 146 2.1E-11 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_09000 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 7.1E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMBLS11_04280 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF01548 Transposase 7 146 2.1E-11 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_04280 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 7.1E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMBLS11_03685 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF01548 Transposase 7 146 2.1E-11 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_03685 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 7.1E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMBLS11_18645 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF01548 Transposase 7 146 2.1E-11 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_18645 8047b6fc866fb462a377921765bcdc7c 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 7.1E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMBLS11_08115 2d85a86ae8617f121add41377b70efde 518 Gene3D G3DSA:3.60.110.10 229 513 1.8E-58 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMBLS11_08115 2d85a86ae8617f121add41377b70efde 518 SUPERFAMILY SSF56317 230 497 7.98E-61 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMBLS11_08115 2d85a86ae8617f121add41377b70efde 518 Gene3D G3DSA:3.40.630.30 8 223 1.1E-52 T 14-10-2018 AMBLS11_08115 2d85a86ae8617f121add41377b70efde 518 SUPERFAMILY SSF55729 17 151 1.72E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_08115 2d85a86ae8617f121add41377b70efde 518 Pfam PF00583 Acetyltransferase (GNAT) family 56 151 1.9E-7 T 14-10-2018 IPR000182 GNAT domain AMBLS11_08115 2d85a86ae8617f121add41377b70efde 518 Pfam PF00795 Carbon-nitrogen hydrolase 234 491 8.5E-36 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMBLS11_17705 abba3409cb7c6eb1f09a9627a76bd9d7 187 SMART SM00116 41 89 0.37 T 14-10-2018 IPR000644 CBS domain AMBLS11_17705 abba3409cb7c6eb1f09a9627a76bd9d7 187 SMART SM00116 123 167 3.4 T 14-10-2018 IPR000644 CBS domain AMBLS11_17705 abba3409cb7c6eb1f09a9627a76bd9d7 187 Gene3D G3DSA:3.10.580.10 20 173 7.9E-19 T 14-10-2018 AMBLS11_17705 abba3409cb7c6eb1f09a9627a76bd9d7 187 SUPERFAMILY SSF54631 42 166 9.59E-17 T 14-10-2018 AMBLS11_17705 abba3409cb7c6eb1f09a9627a76bd9d7 187 Pfam PF00571 CBS domain 126 166 5.9E-6 T 14-10-2018 IPR000644 CBS domain AMBLS11_17705 abba3409cb7c6eb1f09a9627a76bd9d7 187 Pfam PF00571 CBS domain 42 84 2.9E-5 T 14-10-2018 IPR000644 CBS domain AMBLS11_00410 ff4a373aadd26764e16d23b813927d18 217 Gene3D G3DSA:3.40.50.150 19 200 3.3E-29 T 14-10-2018 AMBLS11_00410 ff4a373aadd26764e16d23b813927d18 217 Pfam PF13649 Methyltransferase domain 61 154 2.3E-12 T 14-10-2018 AMBLS11_00410 ff4a373aadd26764e16d23b813927d18 217 SUPERFAMILY SSF53335 21 198 3.16E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_15300 03547cddbd030a44d7ef34addac47769 698 SMART SM00900 74 169 3.0E-6 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMBLS11_15300 03547cddbd030a44d7ef34addac47769 698 PIRSF PIRSF036354 1 698 7.4E-167 T 14-10-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 AMBLS11_15300 03547cddbd030a44d7ef34addac47769 698 Pfam PF12801 4Fe-4S binding domain 482 528 7.4E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMBLS11_15300 03547cddbd030a44d7ef34addac47769 698 Pfam PF12801 4Fe-4S binding domain 585 620 0.0015 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMBLS11_15300 03547cddbd030a44d7ef34addac47769 698 SUPERFAMILY SSF54862 496 668 1.6E-8 T 14-10-2018 AMBLS11_02565 9b6f716a1e00453f4962ceebfc5b5f72 81 SUPERFAMILY SSF47598 32 72 2.0E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMBLS11_13010 a3723fe8416aab34cb307835652692d2 214 Pfam PF10679 Protein of unknown function (DUF2491) 1 211 2.7E-80 T 14-10-2018 IPR019621 Protein of unknown function DUF2491 AMBLS11_10760 076042b5d24945d2f571945fd40a1deb 294 Pfam PF00892 EamA-like transporter family 146 276 2.9E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_10760 076042b5d24945d2f571945fd40a1deb 294 SUPERFAMILY SSF103481 42 130 3.14E-5 T 14-10-2018 AMBLS11_10760 076042b5d24945d2f571945fd40a1deb 294 SUPERFAMILY SSF103481 182 276 3.53E-10 T 14-10-2018 AMBLS11_07210 702cc09bd380c9a66797c27b85d7fea4 306 SMART SM00267 130 305 2.7E-44 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07210 702cc09bd380c9a66797c27b85d7fea4 306 Gene3D G3DSA:3.40.50.2300 2 133 1.6E-36 T 14-10-2018 AMBLS11_07210 702cc09bd380c9a66797c27b85d7fea4 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 303 1.5E-42 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07210 702cc09bd380c9a66797c27b85d7fea4 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 304 9.3E-45 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_07210 702cc09bd380c9a66797c27b85d7fea4 306 SUPERFAMILY SSF52172 11 142 1.71E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_07210 702cc09bd380c9a66797c27b85d7fea4 306 SMART SM00448 12 124 2.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_07210 702cc09bd380c9a66797c27b85d7fea4 306 Pfam PF00072 Response regulator receiver domain 14 125 6.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_07210 702cc09bd380c9a66797c27b85d7fea4 306 SUPERFAMILY SSF55073 146 303 1.77E-38 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_07210 702cc09bd380c9a66797c27b85d7fea4 306 Gene3D G3DSA:3.30.70.270 134 305 4.5E-47 T 14-10-2018 AMBLS11_12555 d92b391e1a17c60a7e9e7295ca24c896 290 SUPERFAMILY SSF54637 181 285 2.39E-22 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_12555 d92b391e1a17c60a7e9e7295ca24c896 290 Pfam PF01575 MaoC like domain 180 262 8.5E-20 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMBLS11_12555 d92b391e1a17c60a7e9e7295ca24c896 290 PRINTS PR01483 Fatty acid synthase signature 180 202 3.4E-6 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AMBLS11_12555 d92b391e1a17c60a7e9e7295ca24c896 290 PRINTS PR01483 Fatty acid synthase signature 202 223 3.4E-6 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AMBLS11_12555 d92b391e1a17c60a7e9e7295ca24c896 290 Gene3D G3DSA:3.10.129.10 26 286 1.4E-56 T 14-10-2018 AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 42.335 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 251 1.8E-99 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 Pfam PF00557 Metallopeptidase family M24 12 243 5.7E-57 T 14-10-2018 IPR000994 Peptidase M24 AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 SUPERFAMILY SSF55920 4 255 3.53E-94 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 2.0E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 2.0E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 2.0E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 2.0E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMBLS11_04550 560aa481d42ac289746d401fa2cc23eb 264 Gene3D G3DSA:3.90.230.10 2 261 1.3E-116 T 14-10-2018 AMBLS11_00465 f12bbe937e3adbf7ddd65ae2012378e3 408 Pfam PF12821 Threonine/Serine exporter, ThrE 275 400 1.1E-12 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE AMBLS11_00465 f12bbe937e3adbf7ddd65ae2012378e3 408 Pfam PF06738 Putative threonine/serine exporter 11 252 1.8E-62 T 14-10-2018 IPR010619 Putative threonine/serine exporter AMBLS11_10350 9aa2073c97538db0e5a56de95438aef4 184 Gene3D G3DSA:3.40.30.10 21 184 1.7E-46 T 14-10-2018 AMBLS11_10350 9aa2073c97538db0e5a56de95438aef4 184 PRINTS PR01011 Glutathione peroxidase family signature 48 65 9.3E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_10350 9aa2073c97538db0e5a56de95438aef4 184 PRINTS PR01011 Glutathione peroxidase family signature 143 152 9.3E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_10350 9aa2073c97538db0e5a56de95438aef4 184 PRINTS PR01011 Glutathione peroxidase family signature 83 99 9.3E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_10350 9aa2073c97538db0e5a56de95438aef4 184 Pfam PF00255 Glutathione peroxidase 32 136 7.2E-27 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_10350 9aa2073c97538db0e5a56de95438aef4 184 PIRSF PIRSF000303 1 184 3.3E-54 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMBLS11_10350 9aa2073c97538db0e5a56de95438aef4 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AMBLS11_10350 9aa2073c97538db0e5a56de95438aef4 184 SUPERFAMILY SSF52833 36 182 8.69E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_03795 31b5492d6b1a445305bc6dcf5afa5111 535 Gene3D G3DSA:3.40.720.10 212 535 2.6E-84 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMBLS11_03795 31b5492d6b1a445305bc6dcf5afa5111 535 SUPERFAMILY SSF53649 236 521 9.16E-20 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMBLS11_03795 31b5492d6b1a445305bc6dcf5afa5111 535 Pfam PF00884 Sulfatase 234 515 3.6E-44 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMBLS11_03795 31b5492d6b1a445305bc6dcf5afa5111 535 Pfam PF08019 Domain of unknown function (DUF1705) 59 208 2.2E-32 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 Gene3D G3DSA:3.40.1410.10 74 202 4.7E-29 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 55 3.7E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 SUPERFAMILY SSF46785 2 59 7.44E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 SMART SM00345 1 55 4.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 SMART SM00866 76 214 4.1E-20 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 Pfam PF07702 UTRA domain 76 196 5.5E-29 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 SUPERFAMILY SSF64288 43 195 4.55E-36 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 Gene3D G3DSA:1.10.10.10 1 59 2.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 15 29 2.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_03995 a6bab35421b9db4dccd3b3e3940e7c6c 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 45 2.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMBLS11_00345 d48946e63adc3b8d530459d2a9d91f87 135 SUPERFAMILY SSF46626 55 132 3.84E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_00345 d48946e63adc3b8d530459d2a9d91f87 135 PRINTS PR00607 Class IE cytochrome C signature 106 118 1.8E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AMBLS11_00345 d48946e63adc3b8d530459d2a9d91f87 135 PRINTS PR00607 Class IE cytochrome C signature 121 132 1.8E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AMBLS11_00345 d48946e63adc3b8d530459d2a9d91f87 135 PRINTS PR00607 Class IE cytochrome C signature 66 77 1.8E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AMBLS11_00345 d48946e63adc3b8d530459d2a9d91f87 135 PRINTS PR00607 Class IE cytochrome C signature 77 87 1.8E-16 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AMBLS11_00345 d48946e63adc3b8d530459d2a9d91f87 135 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 131 2.1E-16 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_00345 d48946e63adc3b8d530459d2a9d91f87 135 Gene3D G3DSA:1.10.760.10 53 133 9.3E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_08245 fbd87f68362911f6084aa6ccadecd9d8 407 Gene3D G3DSA:3.20.20.70 5 354 1.7E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_08245 fbd87f68362911f6084aa6ccadecd9d8 407 SUPERFAMILY SSF51395 4 350 1.16E-100 T 14-10-2018 AMBLS11_08245 fbd87f68362911f6084aa6ccadecd9d8 407 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 342 1.8E-53 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMBLS11_17755 1bc752845634365ba667d9a91fb62820 358 Gene3D G3DSA:3.30.70.270 173 351 7.5E-49 T 14-10-2018 AMBLS11_17755 1bc752845634365ba667d9a91fb62820 358 SMART SM00267 176 352 2.9E-50 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_17755 1bc752845634365ba667d9a91fb62820 358 SUPERFAMILY SSF55073 192 351 1.26E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_17755 1bc752845634365ba667d9a91fb62820 358 Pfam PF00990 Diguanylate cyclase, GGDEF domain 188 347 1.2E-41 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_17755 1bc752845634365ba667d9a91fb62820 358 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 351 6.4E-41 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_12155 0301b7c2f412cf9612c19cc147699293 296 SUPERFAMILY SSF48576 1 275 2.16E-80 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMBLS11_12155 0301b7c2f412cf9612c19cc147699293 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMBLS11_12155 0301b7c2f412cf9612c19cc147699293 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMBLS11_12155 0301b7c2f412cf9612c19cc147699293 296 Pfam PF00348 Polyprenyl synthetase 31 268 1.5E-53 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMBLS11_12155 0301b7c2f412cf9612c19cc147699293 296 Gene3D G3DSA:1.10.600.10 2 296 4.7E-88 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMBLS11_17435 2c61c7edad369e362ba7d39707c03a9c 133 SUPERFAMILY SSF54995 1 104 6.54E-37 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17435 2c61c7edad369e362ba7d39707c03a9c 133 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.102 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMBLS11_17435 2c61c7edad369e362ba7d39707c03a9c 133 Pfam PF01250 Ribosomal protein S6 3 91 3.3E-26 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_17435 2c61c7edad369e362ba7d39707c03a9c 133 Gene3D G3DSA:3.30.70.60 1 92 1.3E-31 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMBLS11_17435 2c61c7edad369e362ba7d39707c03a9c 133 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 4.0E-34 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_10675 d7c5856049ae0574f1e8ceba17470ae6 82 SUPERFAMILY SSF54285 1 80 1.18E-18 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMBLS11_10675 d7c5856049ae0574f1e8ceba17470ae6 82 Gene3D G3DSA:3.10.20.30 2 82 6.7E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_10675 d7c5856049ae0574f1e8ceba17470ae6 82 Pfam PF02597 ThiS family 5 82 1.9E-17 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMBLS11_15720 9f85b1b6172e66b5e9b0ff8643e0867d 136 Gene3D G3DSA:3.30.420.270 62 130 1.3E-8 T 14-10-2018 AMBLS11_15720 9f85b1b6172e66b5e9b0ff8643e0867d 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 134 8.9E-32 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 Gene3D G3DSA:3.40.10.10 2 67 1.7E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 Gene3D G3DSA:1.10.340.30 302 415 4.3E-20 T 14-10-2018 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 SMART SM00342 91 175 4.5E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 SUPERFAMILY SSF55945 187 281 1.08E-23 T 14-10-2018 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 Gene3D G3DSA:3.30.310.20 187 301 5.8E-25 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 SUPERFAMILY SSF46689 129 177 7.17E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 SUPERFAMILY SSF48150 292 455 2.94E-24 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 Pfam PF12833 Helix-turn-helix domain 98 176 3.0E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 Pfam PF06029 AlkA N-terminal domain 187 301 2.7E-30 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 129 171 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 Gene3D G3DSA:1.10.10.60 82 180 9.4E-18 T 14-10-2018 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 Pfam PF02805 Metal binding domain of Ada 4 65 1.4E-30 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 SUPERFAMILY SSF57884 3 78 1.96E-32 T 14-10-2018 IPR035451 Ada-like domain superfamily AMBLS11_17810 8e166074c4c14ec44358fa209a386ac4 459 SMART SM01009 186 301 1.5E-31 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AMBLS11_14270 8ebbf67cc7cfaa8fbabc56bc72122782 144 SUPERFAMILY SSF82784 3 141 1.44E-34 T 14-10-2018 IPR036102 OsmC/Ohr superfamily AMBLS11_14270 8ebbf67cc7cfaa8fbabc56bc72122782 144 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 5.4E-56 T 14-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AMBLS11_14270 8ebbf67cc7cfaa8fbabc56bc72122782 144 Gene3D G3DSA:3.30.300.20 1 142 1.5E-39 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMBLS11_14270 8ebbf67cc7cfaa8fbabc56bc72122782 144 Pfam PF02566 OsmC-like protein 42 139 3.3E-20 T 14-10-2018 IPR003718 OsmC/Ohr family AMBLS11_13405 4ffc69d324005af91ee3772eeaf6a0c5 447 SUPERFAMILY SSF55920 208 400 4.45E-13 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMBLS11_13405 4ffc69d324005af91ee3772eeaf6a0c5 447 Gene3D G3DSA:3.90.230.10 190 433 3.8E-12 T 14-10-2018 AMBLS11_13405 4ffc69d324005af91ee3772eeaf6a0c5 447 Pfam PF00557 Metallopeptidase family M24 216 400 1.3E-9 T 14-10-2018 IPR000994 Peptidase M24 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 SUPERFAMILY SSF102735 1 131 5.49E-42 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 Gene3D G3DSA:3.10.50.40 150 246 2.5E-103 T 14-10-2018 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 TIGRFAM TIGR00115 tig: trigger factor 11 414 3.3E-147 T 14-10-2018 IPR005215 Trigger factor GO:0015031 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 Hamap MF_00303 Trigger factor [tig]. 1 420 22.227 T 14-10-2018 IPR005215 Trigger factor GO:0015031 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 PIRSF PIRSF003095 1 434 2.4E-132 T 14-10-2018 IPR005215 Trigger factor GO:0015031 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 Gene3D G3DSA:1.10.3120.10 116 419 2.5E-103 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 Gene3D G3DSA:3.30.70.1050 1 115 9.4E-42 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 155 230 2.1E-14 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 6.4E-43 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 SUPERFAMILY SSF109998 248 431 4.02E-48 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 SUPERFAMILY SSF54534 88 241 9.43E-39 T 14-10-2018 AMBLS11_12745 caa7c76cadebfa5198c3b34174791afc 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 415 7.8E-39 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMBLS11_01510 279b69ac6b75d3cce2b6d5016a4fc29d 167 Pfam PF01584 CheW-like domain 17 153 5.1E-36 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_01510 279b69ac6b75d3cce2b6d5016a4fc29d 167 Gene3D G3DSA:2.40.50.180 36 145 4.2E-39 T 14-10-2018 AMBLS11_01510 279b69ac6b75d3cce2b6d5016a4fc29d 167 Gene3D G3DSA:2.30.30.40 20 144 4.2E-39 T 14-10-2018 AMBLS11_01510 279b69ac6b75d3cce2b6d5016a4fc29d 167 SMART SM00260 13 150 6.5E-38 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMBLS11_01510 279b69ac6b75d3cce2b6d5016a4fc29d 167 SUPERFAMILY SSF50341 15 154 7.46E-39 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMBLS11_04965 87054b3e44b716afc9dc2666ea0a6c71 260 PRINTS PR01003 Flagellar assembly protein FliH signature 103 121 1.9E-10 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMBLS11_04965 87054b3e44b716afc9dc2666ea0a6c71 260 PRINTS PR01003 Flagellar assembly protein FliH signature 212 228 1.9E-10 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMBLS11_04965 87054b3e44b716afc9dc2666ea0a6c71 260 PRINTS PR01003 Flagellar assembly protein FliH signature 80 102 1.9E-10 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMBLS11_04965 87054b3e44b716afc9dc2666ea0a6c71 260 PRINTS PR01003 Flagellar assembly protein FliH signature 142 159 1.9E-10 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AMBLS11_04965 87054b3e44b716afc9dc2666ea0a6c71 260 Pfam PF02108 Flagellar assembly protein FliH 121 246 1.1E-32 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AMBLS11_16960 5ef0c5c59c7162224f545d3b6ec0c860 458 Pfam PF01618 MotA/TolQ/ExbB proton channel family 320 428 6.0E-26 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMBLS11_07940 2fa27918c9b08bd8309ab911dc76c77c 210 SUPERFAMILY SSF51735 2 199 8.79E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_07940 2fa27918c9b08bd8309ab911dc76c77c 210 Pfam PF13460 NAD(P)H-binding 8 188 1.8E-42 T 14-10-2018 IPR016040 NAD(P)-binding domain AMBLS11_07940 2fa27918c9b08bd8309ab911dc76c77c 210 Gene3D G3DSA:3.40.50.720 1 210 7.5E-52 T 14-10-2018 AMBLS11_18375 44328bbae0989c79bcda81a225656d59 82 Pfam PF04102 SlyX 19 82 3.4E-23 T 14-10-2018 IPR007236 SlyX AMBLS11_18375 44328bbae0989c79bcda81a225656d59 82 Hamap MF_00715 Protein SlyX [slyX]. 15 82 15.824 T 14-10-2018 IPR007236 SlyX AMBLS11_05390 4d60fbadc506feb1adb5e055e5ac6fe9 311 SUPERFAMILY SSF103481 47 151 1.02E-13 T 14-10-2018 AMBLS11_05390 4d60fbadc506feb1adb5e055e5ac6fe9 311 Pfam PF00892 EamA-like transporter family 160 291 7.6E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_05390 4d60fbadc506feb1adb5e055e5ac6fe9 311 Pfam PF00892 EamA-like transporter family 13 148 4.1E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_05390 4d60fbadc506feb1adb5e055e5ac6fe9 311 SUPERFAMILY SSF103481 191 296 1.7E-10 T 14-10-2018 AMBLS11_18740 725e29663f973f4badf92118dfbbc936 145 Pfam PF13279 Thioesterase-like superfamily 20 134 1.4E-12 T 14-10-2018 AMBLS11_18740 725e29663f973f4badf92118dfbbc936 145 SUPERFAMILY SSF54637 7 140 6.78E-37 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_18740 725e29663f973f4badf92118dfbbc936 145 Gene3D G3DSA:3.10.129.10 2 142 7.9E-43 T 14-10-2018 AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 Gene3D G3DSA:3.30.565.10 406 561 1.0E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 502 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 537 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 557 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 516 6.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 SUPERFAMILY SSF47384 307 359 3.73E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 SUPERFAMILY SSF55874 410 557 4.06E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 SMART SM00387 448 560 1.4E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 452 558 2.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMBLS11_03200 967abbef06c22572af6009736ab75ab0 561 Gene3D G3DSA:1.10.287.130 298 400 3.9E-19 T 14-10-2018 AMBLS11_15275 d03a170f0e83162e9b6e95e74bc466d3 409 SUPERFAMILY SSF56935 29 409 5.8E-19 T 14-10-2018 AMBLS11_06065 bddab710347642a16b0ca1ce920c4565 146 Pfam PF05099 Tellurite resistance protein TerB 10 139 1.6E-34 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AMBLS11_06065 bddab710347642a16b0ca1ce920c4565 146 SUPERFAMILY SSF158682 14 140 1.44E-22 T 14-10-2018 IPR029024 TerB-like AMBLS11_06065 bddab710347642a16b0ca1ce920c4565 146 Gene3D G3DSA:1.10.3680.10 1 136 3.8E-17 T 14-10-2018 IPR029024 TerB-like AMBLS11_04565 4ccb6a3a754ec19d26b878cbff8064ea 245 SUPERFAMILY SSF53633 8 240 6.81E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_04565 4ccb6a3a754ec19d26b878cbff8064ea 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 3.9E-102 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AMBLS11_04565 4ccb6a3a754ec19d26b878cbff8064ea 245 Gene3D G3DSA:3.40.1160.10 4 244 1.8E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMBLS11_04565 4ccb6a3a754ec19d26b878cbff8064ea 245 Pfam PF00696 Amino acid kinase family 11 219 2.9E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMBLS11_04565 4ccb6a3a754ec19d26b878cbff8064ea 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.86 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AMBLS11_04565 4ccb6a3a754ec19d26b878cbff8064ea 245 PIRSF PIRSF005650 4 245 2.7E-89 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AMBLS11_12645 da20ad8d7264d3492582f76c3dd33e41 314 Gene3D G3DSA:3.40.1010.20 97 196 5.0E-111 T 14-10-2018 AMBLS11_12645 da20ad8d7264d3492582f76c3dd33e41 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 1.8E-98 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMBLS11_12645 da20ad8d7264d3492582f76c3dd33e41 314 Gene3D G3DSA:3.40.50.11270 12 96 5.0E-111 T 14-10-2018 AMBLS11_12645 da20ad8d7264d3492582f76c3dd33e41 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 37.135 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMBLS11_12645 da20ad8d7264d3492582f76c3dd33e41 314 Gene3D G3DSA:3.40.1010.20 6 282 5.0E-111 T 14-10-2018 AMBLS11_12645 da20ad8d7264d3492582f76c3dd33e41 314 Pfam PF02401 LytB protein 3 283 4.3E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMBLS11_17080 2cc1fed736a4c62c7a33af5607b9824a 225 Pfam PF07947 YhhN family 28 212 4.6E-34 T 14-10-2018 IPR012506 YhhN-like GO:0016021 AMBLS11_12045 e15289c5becfad334287603dad822c64 265 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMBLS11_12045 e15289c5becfad334287603dad822c64 265 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 19 179 5.7E-37 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AMBLS11_12045 e15289c5becfad334287603dad822c64 265 Gene3D G3DSA:1.20.120.1760 7 141 1.3E-16 T 14-10-2018 AMBLS11_12045 e15289c5becfad334287603dad822c64 265 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 75 1.3E-15 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMBLS11_16465 d5fa7c1b94dab0c158e3822975b08e1e 82 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 6.1E-10 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AMBLS11_16465 d5fa7c1b94dab0c158e3822975b08e1e 82 SUPERFAMILY SSF47598 4 45 1.63E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMBLS11_01900 3bfad8cdb0a2fa62c362b0025ddf457a 215 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 153 201 1.3E-5 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type AMBLS11_01900 3bfad8cdb0a2fa62c362b0025ddf457a 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 3.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_01900 3bfad8cdb0a2fa62c362b0025ddf457a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_01900 3bfad8cdb0a2fa62c362b0025ddf457a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_01900 3bfad8cdb0a2fa62c362b0025ddf457a 215 SUPERFAMILY SSF46689 8 86 2.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_01900 3bfad8cdb0a2fa62c362b0025ddf457a 215 Gene3D G3DSA:1.10.357.10 1 205 7.1E-45 T 14-10-2018 AMBLS11_18065 3662464234bf359341463d38ce9839e4 275 Pfam PF01551 Peptidase family M23 155 252 8.4E-23 T 14-10-2018 IPR016047 Peptidase M23 AMBLS11_18065 3662464234bf359341463d38ce9839e4 275 Gene3D G3DSA:2.70.70.10 130 273 1.7E-39 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_18065 3662464234bf359341463d38ce9839e4 275 SUPERFAMILY SSF51261 56 254 3.45E-32 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_03130 c123e7dd17dfe9c9aa4de22d3084421c 148 Gene3D G3DSA:1.10.10.410 91 147 2.1E-19 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMBLS11_03130 c123e7dd17dfe9c9aa4de22d3084421c 148 SUPERFAMILY SSF89095 1 147 2.98E-41 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AMBLS11_03130 c123e7dd17dfe9c9aa4de22d3084421c 148 Pfam PF09424 Yqey-like protein 5 146 5.9E-52 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 AMBLS11_03130 c123e7dd17dfe9c9aa4de22d3084421c 148 Gene3D G3DSA:1.10.1510.10 1 90 3.4E-25 T 14-10-2018 AMBLS11_13140 4e7300e55d31aa64d1e1abf4841879be 282 SUPERFAMILY SSF52540 8 268 1.9E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_13140 4e7300e55d31aa64d1e1abf4841879be 282 Gene3D G3DSA:3.40.50.300 2 274 4.2E-46 T 14-10-2018 AMBLS11_13140 4e7300e55d31aa64d1e1abf4841879be 282 Pfam PF00685 Sulfotransferase domain 11 186 1.9E-14 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 AMBLS11_07200 6301a7f321805f45e2c2e232ebaf3eab 120 SUPERFAMILY SSF47226 5 119 5.23E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_07200 6301a7f321805f45e2c2e232ebaf3eab 120 Gene3D G3DSA:1.20.120.160 5 120 6.8E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMBLS11_07200 6301a7f321805f45e2c2e232ebaf3eab 120 Pfam PF01627 Hpt domain 35 111 2.4E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMBLS11_03640 38a8bbb159b1fa4a16dac8135db2c20c 221 Gene3D G3DSA:3.10.450.710 25 205 7.8E-47 T 14-10-2018 AMBLS11_03640 38a8bbb159b1fa4a16dac8135db2c20c 221 Pfam PF05494 MlaC protein 34 199 1.3E-50 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AMBLS11_03640 38a8bbb159b1fa4a16dac8135db2c20c 221 PIRSF PIRSF004649 1 212 5.2E-64 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AMBLS11_06075 9ebef2f29477d6eeb91a3e3fee40e713 92 SUPERFAMILY SSF47473 29 80 3.07E-8 T 14-10-2018 IPR011992 EF-hand domain pair AMBLS11_06075 9ebef2f29477d6eeb91a3e3fee40e713 92 Pfam PF13202 EF hand 59 77 0.0015 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 AMBLS11_06075 9ebef2f29477d6eeb91a3e3fee40e713 92 Pfam PF13202 EF hand 33 49 0.0031 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 AMBLS11_06075 9ebef2f29477d6eeb91a3e3fee40e713 92 Gene3D G3DSA:1.10.238.10 21 82 7.3E-9 T 14-10-2018 AMBLS11_06020 75dff032093cd33053908fa959b8f435 170 SUPERFAMILY SSF55729 2 147 4.1E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_06020 75dff032093cd33053908fa959b8f435 170 Pfam PF13302 Acetyltransferase (GNAT) domain 20 145 2.2E-18 T 14-10-2018 IPR000182 GNAT domain AMBLS11_06020 75dff032093cd33053908fa959b8f435 170 Gene3D G3DSA:3.40.630.30 1 158 5.4E-24 T 14-10-2018 AMBLS11_03220 014412627b413df5c9a57a01df6fc41b 263 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 157 260 1.5E-16 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMBLS11_03220 014412627b413df5c9a57a01df6fc41b 263 SMART SM00702 80 260 5.6E-35 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMBLS11_03220 014412627b413df5c9a57a01df6fc41b 263 Gene3D G3DSA:2.60.120.620 67 261 5.2E-52 T 14-10-2018 AMBLS11_06820 aeb123c81278da6c3b45a009f40eb149 185 Pfam PF03061 Thioesterase superfamily 25 98 1.8E-18 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMBLS11_06820 aeb123c81278da6c3b45a009f40eb149 185 SUPERFAMILY SSF54637 9 155 1.79E-42 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_06820 aeb123c81278da6c3b45a009f40eb149 185 Gene3D G3DSA:3.10.129.10 2 163 3.7E-50 T 14-10-2018 AMBLS11_04415 35cd596c1e2561cdacdc5c0a16545288 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 198 217 3.5E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_04415 35cd596c1e2561cdacdc5c0a16545288 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 33 54 3.5E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_04415 35cd596c1e2561cdacdc5c0a16545288 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 178 197 3.5E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_04415 35cd596c1e2561cdacdc5c0a16545288 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 141 165 3.5E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMBLS11_04415 35cd596c1e2561cdacdc5c0a16545288 259 Pfam PF01061 ABC-2 type transporter 15 220 2.5E-15 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMBLS11_16210 d979308ebf6c0138d8b8ae12e172a50e 575 Pfam PF00664 ABC transporter transmembrane region 29 294 4.1E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMBLS11_16210 d979308ebf6c0138d8b8ae12e172a50e 575 SUPERFAMILY SSF52540 338 521 4.58E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_16210 d979308ebf6c0138d8b8ae12e172a50e 575 Gene3D G3DSA:1.20.1560.10 3 324 2.9E-26 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_16210 d979308ebf6c0138d8b8ae12e172a50e 575 Gene3D G3DSA:3.40.50.300 325 546 5.5E-15 T 14-10-2018 AMBLS11_16210 d979308ebf6c0138d8b8ae12e172a50e 575 SUPERFAMILY SSF90123 11 324 6.02E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMBLS11_17865 8277152fae6b9dfca652a2e70a767ade 483 SUPERFAMILY SSF143631 40 322 3.4E-13 T 14-10-2018 IPR003374 ApbE-like superfamily AMBLS11_17865 8277152fae6b9dfca652a2e70a767ade 483 Gene3D G3DSA:3.10.520.20 29 341 3.7E-14 T 14-10-2018 AMBLS11_17865 8277152fae6b9dfca652a2e70a767ade 483 Pfam PF10029 Predicted periplasmic protein (DUF2271) 344 475 3.5E-30 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 AMBLS11_17865 8277152fae6b9dfca652a2e70a767ade 483 Pfam PF02424 ApbE family 40 301 6.0E-12 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AMBLS11_09725 01dcdd4e902fd378a03582500ddf4368 704 Pfam PF13489 Methyltransferase domain 497 632 2.1E-8 T 14-10-2018 AMBLS11_09725 01dcdd4e902fd378a03582500ddf4368 704 Pfam PF12867 DinB superfamily 30 160 2.9E-8 T 14-10-2018 IPR024775 DinB-like domain AMBLS11_09725 01dcdd4e902fd378a03582500ddf4368 704 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 6 446 1.0E-204 T 14-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase AMBLS11_09725 01dcdd4e902fd378a03582500ddf4368 704 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 459 701 4.1E-101 T 14-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain AMBLS11_09725 01dcdd4e902fd378a03582500ddf4368 704 Pfam PF03781 Sulfatase-modifying factor enzyme 1 217 447 1.3E-26 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AMBLS11_09725 01dcdd4e902fd378a03582500ddf4368 704 Gene3D G3DSA:3.90.1580.10 181 457 1.6E-22 T 14-10-2018 AMBLS11_09725 01dcdd4e902fd378a03582500ddf4368 704 SUPERFAMILY SSF56436 194 447 1.02E-52 T 14-10-2018 IPR016187 C-type lectin fold AMBLS11_09725 01dcdd4e902fd378a03582500ddf4368 704 Gene3D G3DSA:3.40.50.150 483 689 4.2E-22 T 14-10-2018 AMBLS11_09725 01dcdd4e902fd378a03582500ddf4368 704 SUPERFAMILY SSF53335 462 649 1.36E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_05775 bad5f58c7a65d1a1f88ca107ae895335 234 Pfam PF04893 Yip1 domain 14 223 8.4E-20 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 AMBLS11_09910 c25e837516985279c2d7ebf6dc9ebd69 376 Gene3D G3DSA:1.10.620.20 2 340 1.5E-144 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AMBLS11_09910 c25e837516985279c2d7ebf6dc9ebd69 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 2.0E-49 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMBLS11_09910 c25e837516985279c2d7ebf6dc9ebd69 376 SUPERFAMILY SSF47240 3 341 1.15E-113 T 14-10-2018 IPR009078 Ferritin-like superfamily AMBLS11_18135 bafb43835f3f81e43aeea1fa58929275 253 SUPERFAMILY SSF53850 22 237 4.45E-33 T 14-10-2018 AMBLS11_18135 bafb43835f3f81e43aeea1fa58929275 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 237 2.3E-23 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_18135 bafb43835f3f81e43aeea1fa58929275 253 Gene3D G3DSA:3.40.190.10 101 202 8.3E-25 T 14-10-2018 AMBLS11_18135 bafb43835f3f81e43aeea1fa58929275 253 SMART SM00062 21 240 8.1E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_18135 bafb43835f3f81e43aeea1fa58929275 253 Gene3D G3DSA:3.40.190.10 31 235 8.3E-25 T 14-10-2018 AMBLS11_13025 c53df7dbfba3bc0f568bc73155115ef2 388 Gene3D G3DSA:3.30.1490.330 264 345 2.1E-21 T 14-10-2018 AMBLS11_13025 c53df7dbfba3bc0f568bc73155115ef2 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 387 5.2E-153 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AMBLS11_13025 c53df7dbfba3bc0f568bc73155115ef2 388 SUPERFAMILY SSF52440 174 280 4.32E-38 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMBLS11_13025 c53df7dbfba3bc0f568bc73155115ef2 388 SUPERFAMILY SSF56059 1 386 4.94E-86 T 14-10-2018 AMBLS11_18585 fb43521d4014249b86e5cd126dcb2c27 404 SUPERFAMILY SSF88713 94 312 1.09E-35 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMBLS11_18585 fb43521d4014249b86e5cd126dcb2c27 404 Gene3D G3DSA:3.20.20.370 71 297 6.7E-56 T 14-10-2018 AMBLS11_18585 fb43521d4014249b86e5cd126dcb2c27 404 Pfam PF01522 Polysaccharide deacetylase 131 262 5.5E-22 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMBLS11_12695 4b19cf1c44f8159d9f2e1ebf2f74c63d 299 Gene3D G3DSA:1.20.1530.20 2 289 4.5E-74 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMBLS11_12695 4b19cf1c44f8159d9f2e1ebf2f74c63d 299 Pfam PF01758 Sodium Bile acid symporter family 12 196 5.8E-32 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AMBLS11_01445 daa58ea861d27a277622941557761f41 441 Pfam PF13520 Amino acid permease 13 398 3.3E-29 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMBLS11_01445 daa58ea861d27a277622941557761f41 441 PIRSF PIRSF006060 1 441 4.6E-63 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMBLS11_01445 daa58ea861d27a277622941557761f41 441 Gene3D G3DSA:1.20.1740.10 7 435 1.8E-79 T 14-10-2018 AMBLS11_18035 5b67ede5107a733797bcfe5b563cdf5c 468 SMART SM00974 345 428 3.7E-31 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding AMBLS11_18035 5b67ede5107a733797bcfe5b563cdf5c 468 Pfam PF13250 Domain of unknown function (DUF4041) 179 234 4.1E-22 T 14-10-2018 IPR025280 Domain of unknown function DUF4041 AMBLS11_18035 5b67ede5107a733797bcfe5b563cdf5c 468 Pfam PF13455 Meiotically up-regulated gene 113 351 422 7.8E-13 T 14-10-2018 AMBLS11_12040 4a6412536eee21f9e310cc3b39703f9e 231 SUPERFAMILY SSF53850 18 205 5.65E-15 T 14-10-2018 AMBLS11_12040 4a6412536eee21f9e310cc3b39703f9e 231 Gene3D G3DSA:3.40.190.10 4 132 3.5E-11 T 14-10-2018 AMBLS11_12040 4a6412536eee21f9e310cc3b39703f9e 231 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 18 123 9.1E-7 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_16075 1418a8529f977bc24e45bfe7934b24a0 144 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 1.1E-31 T 14-10-2018 AMBLS11_16075 1418a8529f977bc24e45bfe7934b24a0 144 SUPERFAMILY SSF50630 6 140 5.44E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_16075 1418a8529f977bc24e45bfe7934b24a0 144 Gene3D G3DSA:2.40.70.10 3 133 2.1E-33 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily AMBLS11_15040 5f3de9bb32236f5d5011ee0c6fe974c1 147 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 139 1.4E-34 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ AMBLS11_17360 adc9403aae0fb47372bd315932ce4117 145 Gene3D G3DSA:2.60.120.460 6 142 1.8E-39 T 14-10-2018 IPR035917 YjbQ-like superfamily AMBLS11_17360 adc9403aae0fb47372bd315932ce4117 145 Pfam PF01894 Uncharacterised protein family UPF0047 23 138 1.3E-36 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMBLS11_17360 adc9403aae0fb47372bd315932ce4117 145 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 18 142 7.3E-43 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMBLS11_17360 adc9403aae0fb47372bd315932ce4117 145 PIRSF PIRSF004681 3 143 1.5E-41 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMBLS11_17360 adc9403aae0fb47372bd315932ce4117 145 SUPERFAMILY SSF111038 6 142 3.4E-45 T 14-10-2018 IPR035917 YjbQ-like superfamily AMBLS11_07120 3be446dcc88d7ead047905c7fd312c23 165 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 98 163 5.7E-7 T 14-10-2018 IPR018550 Lipid A 3-O-deacylase-related AMBLS11_11995 e85582e3df5c3236e367bf836eae86d3 108 SUPERFAMILY SSF82607 10 102 1.57E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMBLS11_11995 e85582e3df5c3236e367bf836eae86d3 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.215 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMBLS11_11995 e85582e3df5c3236e367bf836eae86d3 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 9.5E-36 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMBLS11_11995 e85582e3df5c3236e367bf836eae86d3 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 9.3E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMBLS11_11995 e85582e3df5c3236e367bf836eae86d3 108 PIRSF PIRSF004555 3 108 5.2E-39 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMBLS11_11995 e85582e3df5c3236e367bf836eae86d3 108 Gene3D G3DSA:3.30.1310.10 1 108 4.2E-46 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMBLS11_05745 19825ba55fbfe4d7409be64b22f0ada8 218 Gene3D G3DSA:3.40.50.620 2 215 2.1E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMBLS11_05745 19825ba55fbfe4d7409be64b22f0ada8 218 Pfam PF06508 Queuosine biosynthesis protein QueC 5 209 3.5E-68 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMBLS11_05745 19825ba55fbfe4d7409be64b22f0ada8 218 SUPERFAMILY SSF52402 3 217 3.75E-63 T 14-10-2018 AMBLS11_05745 19825ba55fbfe4d7409be64b22f0ada8 218 PIRSF PIRSF006293 1 218 1.2E-77 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMBLS11_05745 19825ba55fbfe4d7409be64b22f0ada8 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 202 8.7E-65 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMBLS11_05745 19825ba55fbfe4d7409be64b22f0ada8 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 215 50.361 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMBLS11_16840 d7fad15a199c6379a6b00bb6f25fae90 264 PIRSF PIRSF000388 1 264 2.6E-103 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMBLS11_16840 d7fad15a199c6379a6b00bb6f25fae90 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 4.3E-112 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMBLS11_16840 d7fad15a199c6379a6b00bb6f25fae90 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.907 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMBLS11_16840 d7fad15a199c6379a6b00bb6f25fae90 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 4.9E-110 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMBLS11_16840 d7fad15a199c6379a6b00bb6f25fae90 264 SUPERFAMILY SSF51621 3 263 1.97E-107 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMBLS11_16840 d7fad15a199c6379a6b00bb6f25fae90 264 Gene3D G3DSA:3.20.20.60 1 264 3.6E-109 T 14-10-2018 AMBLS11_03610 1cf2a080449b8ad18f6fb6748e27bfc4 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 87 152 2.9E-10 T 14-10-2018 AMBLS11_03610 1cf2a080449b8ad18f6fb6748e27bfc4 182 Gene3D G3DSA:3.40.50.1000 1 182 7.4E-53 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_03610 1cf2a080449b8ad18f6fb6748e27bfc4 182 PIRSF PIRSF006118 8 181 4.0E-63 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMBLS11_03610 1cf2a080449b8ad18f6fb6748e27bfc4 182 SUPERFAMILY SSF56784 16 176 3.68E-39 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_03610 1cf2a080449b8ad18f6fb6748e27bfc4 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 20 171 5.9E-47 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMBLS11_01190 e0b8d602c11eb412a120450cf6bf1375 163 Pfam PF04214 Protein of unknown function, DUF 62 129 4.0E-26 T 14-10-2018 IPR007332 Protein of unknown function DUF411 AMBLS11_08940 17e66eb89a68625843c220245e76a706 1016 Gene3D G3DSA:2.170.130.10 49 172 3.1E-13 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_08940 17e66eb89a68625843c220245e76a706 1016 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 8.1E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_08940 17e66eb89a68625843c220245e76a706 1016 SUPERFAMILY SSF56935 41 1015 8.24E-75 T 14-10-2018 AMBLS11_08940 17e66eb89a68625843c220245e76a706 1016 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 46 1015 1.5E-174 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_08940 17e66eb89a68625843c220245e76a706 1016 Pfam PF00593 TonB dependent receptor 457 1015 1.6E-26 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_09090 d55b48108909171566e2f6df48be0d8e 72 Pfam PF07208 Protein of unknown function (DUF1414) 28 69 3.4E-21 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 AMBLS11_09090 d55b48108909171566e2f6df48be0d8e 72 SUPERFAMILY SSF158651 1 71 1.57E-26 T 14-10-2018 IPR023202 YejL-like superfamily AMBLS11_09090 d55b48108909171566e2f6df48be0d8e 72 PIRSF PIRSF006188 1 72 7.1E-25 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 AMBLS11_09090 d55b48108909171566e2f6df48be0d8e 72 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 4.0E-14 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 AMBLS11_09090 d55b48108909171566e2f6df48be0d8e 72 Gene3D G3DSA:1.10.3390.10 1 72 3.8E-28 T 14-10-2018 IPR023202 YejL-like superfamily AMBLS11_02990 65d94964e302a9d4a83f5ffe90d99abc 505 SUPERFAMILY SSF55816 302 499 4.97E-50 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMBLS11_02990 65d94964e302a9d4a83f5ffe90d99abc 505 SUPERFAMILY SSF56300 41 212 2.78E-25 T 14-10-2018 AMBLS11_02990 65d94964e302a9d4a83f5ffe90d99abc 505 Pfam PF02872 5'-nucleotidase, C-terminal domain 306 461 4.4E-41 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMBLS11_02990 65d94964e302a9d4a83f5ffe90d99abc 505 PRINTS PR01607 Apyrase family signature 362 385 2.1E-8 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMBLS11_02990 65d94964e302a9d4a83f5ffe90d99abc 505 PRINTS PR01607 Apyrase family signature 435 454 2.1E-8 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMBLS11_02990 65d94964e302a9d4a83f5ffe90d99abc 505 Gene3D G3DSA:3.60.21.10 36 234 3.5E-25 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMBLS11_02990 65d94964e302a9d4a83f5ffe90d99abc 505 Gene3D G3DSA:3.90.780.10 305 503 6.3E-51 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 Gene3D G3DSA:3.40.50.200 117 461 3.5E-69 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 198 208 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 Pfam PF00082 Subtilase family 139 439 7.3E-40 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 401 411 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 139 158 5.0E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 194 207 5.0E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 400 416 5.0E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 SUPERFAMILY SSF52743 64 468 1.83E-59 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 Pfam PF00395 S-layer homology domain 752 806 0.0028 T 14-10-2018 IPR001119 S-layer homology domain AMBLS11_16140 137b6ab9ac873ba554e228d0973c7006 815 Pfam PF00395 S-layer homology domain 608 647 1.5E-5 T 14-10-2018 IPR001119 S-layer homology domain AMBLS11_04350 7744d76f10f24c11a149a699da122d4a 262 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 2.8E-79 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04350 7744d76f10f24c11a149a699da122d4a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.5E-60 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04350 7744d76f10f24c11a149a699da122d4a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.5E-60 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04350 7744d76f10f24c11a149a699da122d4a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.5E-60 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04350 7744d76f10f24c11a149a699da122d4a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.5E-60 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04350 7744d76f10f24c11a149a699da122d4a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.5E-60 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04350 7744d76f10f24c11a149a699da122d4a 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.5E-60 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMBLS11_04350 7744d76f10f24c11a149a699da122d4a 262 Pfam PF01578 Cytochrome C assembly protein 25 184 1.5E-30 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMBLS11_17580 d4efad9f0df3f36bc7352c42f64d8092 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 146 2.2E-5 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_17580 d4efad9f0df3f36bc7352c42f64d8092 705 Gene3D G3DSA:2.170.130.10 42 125 5.1E-5 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_17580 d4efad9f0df3f36bc7352c42f64d8092 705 SUPERFAMILY SSF56935 28 705 3.66E-59 T 14-10-2018 AMBLS11_17580 d4efad9f0df3f36bc7352c42f64d8092 705 Gene3D G3DSA:2.40.170.20 156 705 4.2E-51 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_17580 d4efad9f0df3f36bc7352c42f64d8092 705 Pfam PF00593 TonB dependent receptor 222 704 1.0E-25 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_16220 7db116959d8151aee6c17277c9ac4a0d 261 Pfam PF03692 Putative zinc- or iron-chelating domain 56 139 2.5E-7 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AMBLS11_01785 5b7d1248090a7c24fc9b74b91ce0a0b1 283 SUPERFAMILY SSF101898 40 266 5.49E-10 T 14-10-2018 AMBLS11_11655 da3142e3608acdd5591b9eb5f8f9ff8c 486 Gene3D G3DSA:3.40.1090.10 222 363 7.9E-14 T 14-10-2018 AMBLS11_11655 da3142e3608acdd5591b9eb5f8f9ff8c 486 Gene3D G3DSA:3.40.1090.20 146 216 4.9E-8 T 14-10-2018 AMBLS11_11655 da3142e3608acdd5591b9eb5f8f9ff8c 486 Pfam PF11815 Domain of unknown function (DUF3336) 7 141 9.7E-35 T 14-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 AMBLS11_11655 da3142e3608acdd5591b9eb5f8f9ff8c 486 SUPERFAMILY SSF52151 144 468 2.62E-50 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMBLS11_11655 da3142e3608acdd5591b9eb5f8f9ff8c 486 Pfam PF01734 Patatin-like phospholipase 148 330 1.2E-26 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMBLS11_11195 723818432b26f1f265f11062eb851152 400 SUPERFAMILY SSF51126 51 370 3.93E-49 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_11195 723818432b26f1f265f11062eb851152 400 Pfam PF01095 Pectinesterase 55 331 1.5E-29 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AMBLS11_11195 723818432b26f1f265f11062eb851152 400 Gene3D G3DSA:2.160.20.10 41 394 2.1E-99 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_05230 84f331a89eb53e5e8c05dc72f61d50b9 227 Pfam PF04012 PspA/IM30 family 2 215 2.2E-45 T 14-10-2018 IPR007157 PspA/IM30 AMBLS11_05230 84f331a89eb53e5e8c05dc72f61d50b9 227 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 217 5.2E-94 T 14-10-2018 IPR014319 Phage shock protein, PspA AMBLS11_07040 e66d002124b9ef735c14150ffb5fdc10 228 SUPERFAMILY SSF55166 22 183 7.85E-22 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMBLS11_07040 e66d002124b9ef735c14150ffb5fdc10 228 Gene3D G3DSA:3.30.1380.10 3 198 1.7E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMBLS11_07040 e66d002124b9ef735c14150ffb5fdc10 228 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 26 181 5.4E-35 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AMBLS11_02945 250b85a5e7d8e323c5b408e4ac25720d 446 SUPERFAMILY SSF52172 367 436 8.95E-13 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_02945 250b85a5e7d8e323c5b408e4ac25720d 446 SMART SM01012 381 436 8.7E-17 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMBLS11_02945 250b85a5e7d8e323c5b408e4ac25720d 446 Gene3D G3DSA:1.10.10.10 384 442 7.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_02945 250b85a5e7d8e323c5b408e4ac25720d 446 Pfam PF08376 Nitrate and nitrite sensing 46 290 7.1E-43 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein AMBLS11_02945 250b85a5e7d8e323c5b408e4ac25720d 446 Pfam PF03861 ANTAR domain 384 436 2.2E-14 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMBLS11_13015 771a2a7d48051dead77a3a4117a28a9c 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 2.9E-12 T 14-10-2018 IPR007140 Protein of unknown function DUF350 AMBLS11_13015 771a2a7d48051dead77a3a4117a28a9c 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 9.5E-13 T 14-10-2018 IPR007140 Protein of unknown function DUF350 AMBLS11_05375 f3ee193d0ba297ba5d522908af9504d2 280 SUPERFAMILY SSF56112 52 249 2.72E-29 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_05375 f3ee193d0ba297ba5d522908af9504d2 280 Pfam PF01636 Phosphotransferase enzyme family 20 243 1.0E-16 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMBLS11_05375 f3ee193d0ba297ba5d522908af9504d2 280 Gene3D G3DSA:3.90.1200.10 112 279 5.0E-22 T 14-10-2018 AMBLS11_08270 348e05d42c4e938893b78eb910d7e4f1 656 ProSitePatterns PS01303 BCCT family of transporters signature. 314 323 - T 14-10-2018 IPR018093 BCCT transporter, conserved site AMBLS11_08270 348e05d42c4e938893b78eb910d7e4f1 656 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 495 2.1E-159 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AMBLS11_08270 348e05d42c4e938893b78eb910d7e4f1 656 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 495 6.8E-192 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AMBLS11_18220 f8b1a24e528daac07ee73495b8109aa6 134 SMART SM00363 13 80 5.4E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_18220 f8b1a24e528daac07ee73495b8109aa6 134 PIRSF PIRSF016821 10 134 8.9E-41 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AMBLS11_18220 f8b1a24e528daac07ee73495b8109aa6 134 Pfam PF01479 S4 domain 13 59 1.0E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMBLS11_18220 f8b1a24e528daac07ee73495b8109aa6 134 SUPERFAMILY SSF55174 12 108 3.53E-27 T 14-10-2018 AMBLS11_18220 f8b1a24e528daac07ee73495b8109aa6 134 Gene3D G3DSA:3.10.290.10 6 112 9.7E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMBLS11_08140 b066b51f85eb86c66a35e74c4e2c1e2c 187 PIRSF PIRSF000239 1 187 8.9E-52 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_08140 b066b51f85eb86c66a35e74c4e2c1e2c 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 6.3E-103 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMBLS11_08140 b066b51f85eb86c66a35e74c4e2c1e2c 187 SUPERFAMILY SSF52833 1 186 3.34E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_08140 b066b51f85eb86c66a35e74c4e2c1e2c 187 Gene3D G3DSA:3.40.30.10 1 186 1.2E-61 T 14-10-2018 AMBLS11_08140 b066b51f85eb86c66a35e74c4e2c1e2c 187 Pfam PF00578 AhpC/TSA family 9 133 8.3E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_08140 b066b51f85eb86c66a35e74c4e2c1e2c 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_16490 a387a0e16a500be1f29da73d8b1b2ba6 83 Pfam PF06146 Phosphate-starvation-inducible E 10 69 1.2E-11 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like AMBLS11_16490 a387a0e16a500be1f29da73d8b1b2ba6 83 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 3 74 1.2E-27 T 14-10-2018 IPR013468 Conserved hypothetical protein CHP02647 AMBLS11_16975 5788ac8aa734fb6bae93202564bdac0f 366 Gene3D G3DSA:3.20.20.70 12 365 1.4E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_16975 5788ac8aa734fb6bae93202564bdac0f 366 PIRSF PIRSF000138 4 366 3.1E-118 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMBLS11_16975 5788ac8aa734fb6bae93202564bdac0f 366 SUPERFAMILY SSF51395 14 362 3.54E-91 T 14-10-2018 AMBLS11_16975 5788ac8aa734fb6bae93202564bdac0f 366 Pfam PF01070 FMN-dependent dehydrogenase 23 362 2.7E-117 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AMBLS11_13715 7fb69d1b50731ac72e4ffaaaec2fcd25 375 Pfam PF13483 Beta-lactamase superfamily domain 83 318 3.8E-5 T 14-10-2018 AMBLS11_13715 7fb69d1b50731ac72e4ffaaaec2fcd25 375 Gene3D G3DSA:3.60.15.10 58 350 1.6E-21 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_13715 7fb69d1b50731ac72e4ffaaaec2fcd25 375 SUPERFAMILY SSF56281 84 323 1.22E-15 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMBLS11_07255 eae89aaf253ffe8feda3a99379738f16 272 Pfam PF01925 Sulfite exporter TauE/SafE 15 266 5.2E-48 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMBLS11_15865 87bb3c4caaeb6c567b53a2e07fdc297f 301 Pfam PF04116 Fatty acid hydroxylase superfamily 82 231 7.8E-24 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AMBLS11_11920 dfc47abafed83abeab006821cba2d5c2 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 100.345 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMBLS11_11920 dfc47abafed83abeab006821cba2d5c2 199 Pfam PF13662 Toprim domain 83 172 1.1E-23 T 14-10-2018 IPR006171 TOPRIM domain AMBLS11_11920 dfc47abafed83abeab006821cba2d5c2 199 Gene3D G3DSA:3.40.1360.10 77 199 1.2E-41 T 14-10-2018 AMBLS11_11920 dfc47abafed83abeab006821cba2d5c2 199 SMART SM00493 81 166 9.5E-17 T 14-10-2018 IPR006171 TOPRIM domain AMBLS11_11920 dfc47abafed83abeab006821cba2d5c2 199 Pfam PF02132 RecR protein 40 77 1.9E-14 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AMBLS11_11920 dfc47abafed83abeab006821cba2d5c2 199 SUPERFAMILY SSF111304 2 199 1.27E-73 T 14-10-2018 IPR023627 Recombination protein RecR AMBLS11_11920 dfc47abafed83abeab006821cba2d5c2 199 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.4E-76 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMBLS11_11920 dfc47abafed83abeab006821cba2d5c2 199 Gene3D G3DSA:1.10.8.420 1 52 6.7E-17 T 14-10-2018 AMBLS11_09105 844a68d0715ff2068c818cf29e6820e9 306 Gene3D G3DSA:2.70.70.10 148 302 2.2E-41 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_09105 844a68d0715ff2068c818cf29e6820e9 306 SUPERFAMILY SSF51261 95 299 4.97E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif AMBLS11_09105 844a68d0715ff2068c818cf29e6820e9 306 Pfam PF01551 Peptidase family M23 202 296 1.6E-27 T 14-10-2018 IPR016047 Peptidase M23 AMBLS11_10145 f2a080670632d144631fa2de00a09856 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 223 306 1.0E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMBLS11_10145 f2a080670632d144631fa2de00a09856 349 Pfam PF01548 Transposase 12 156 4.0E-17 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_02545 f2a080670632d144631fa2de00a09856 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 223 306 1.0E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMBLS11_02545 f2a080670632d144631fa2de00a09856 349 Pfam PF01548 Transposase 12 156 4.0E-17 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_15805 154a941c0929692c850e3c3475a1caf3 470 PIRSF PIRSF006060 403 468 130.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMBLS11_15805 154a941c0929692c850e3c3475a1caf3 470 PIRSF PIRSF006060 1 382 9.0E-57 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMBLS11_15805 154a941c0929692c850e3c3475a1caf3 470 Pfam PF13520 Amino acid permease 14 378 1.2E-30 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMBLS11_15805 154a941c0929692c850e3c3475a1caf3 470 Gene3D G3DSA:1.20.1740.10 8 390 3.4E-60 T 14-10-2018 AMBLS11_10605 c36b48fc46b1c91be4fb26457a1ce3c2 324 Pfam PF00107 Zinc-binding dehydrogenase 151 282 8.6E-36 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMBLS11_10605 c36b48fc46b1c91be4fb26457a1ce3c2 324 SUPERFAMILY SSF50129 1 140 5.02E-40 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_10605 c36b48fc46b1c91be4fb26457a1ce3c2 324 SMART SM00829 10 322 4.4E-41 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_10605 c36b48fc46b1c91be4fb26457a1ce3c2 324 Gene3D G3DSA:3.40.50.720 123 267 3.4E-103 T 14-10-2018 AMBLS11_10605 c36b48fc46b1c91be4fb26457a1ce3c2 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 2.0E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_10605 c36b48fc46b1c91be4fb26457a1ce3c2 324 Gene3D G3DSA:3.90.180.10 13 318 3.4E-103 T 14-10-2018 AMBLS11_10605 c36b48fc46b1c91be4fb26457a1ce3c2 324 SUPERFAMILY SSF51735 116 288 9.06E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_11250 670d765e3e0a1f3ed5b7d52ead28cc2d 384 Gene3D G3DSA:1.20.1090.10 182 383 3.1E-45 T 14-10-2018 AMBLS11_11250 670d765e3e0a1f3ed5b7d52ead28cc2d 384 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 261 281 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMBLS11_11250 670d765e3e0a1f3ed5b7d52ead28cc2d 384 SUPERFAMILY SSF56796 2 364 1.57E-106 T 14-10-2018 AMBLS11_11250 670d765e3e0a1f3ed5b7d52ead28cc2d 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 357 1.1E-90 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMBLS11_11250 670d765e3e0a1f3ed5b7d52ead28cc2d 384 Gene3D G3DSA:3.40.50.1970 1 181 1.4E-50 T 14-10-2018 AMBLS11_11555 437ba3d9398691b709d4db0c1877dbfc 508 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_11555 437ba3d9398691b709d4db0c1877dbfc 508 Pfam PF00005 ABC transporter 44 175 1.1E-11 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_11555 437ba3d9398691b709d4db0c1877dbfc 508 SUPERFAMILY SSF52540 284 505 1.7E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_11555 437ba3d9398691b709d4db0c1877dbfc 508 Gene3D G3DSA:3.40.50.300 272 508 1.2E-40 T 14-10-2018 AMBLS11_11555 437ba3d9398691b709d4db0c1877dbfc 508 SMART SM00382 314 507 1.1 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_11555 437ba3d9398691b709d4db0c1877dbfc 508 SMART SM00382 40 223 7.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_11555 437ba3d9398691b709d4db0c1877dbfc 508 Gene3D G3DSA:3.40.50.300 39 252 1.3E-20 T 14-10-2018 AMBLS11_11555 437ba3d9398691b709d4db0c1877dbfc 508 SUPERFAMILY SSF52540 36 195 5.08E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_11555 437ba3d9398691b709d4db0c1877dbfc 508 Pfam PF00005 ABC transporter 306 458 1.6E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_01635 b79bfc266b435c8a68b8bbf5d215edd6 107 Pfam PF11872 Protein of unknown function (DUF3392) 2 104 3.4E-35 T 14-10-2018 IPR021813 Protein of unknown function DUF3392 AMBLS11_06735 a1868b1ae7e482fab0f3fc436198bc1f 149 SUPERFAMILY SSF49764 8 142 3.84E-25 T 14-10-2018 IPR008978 HSP20-like chaperone AMBLS11_06735 a1868b1ae7e482fab0f3fc436198bc1f 149 Pfam PF00011 Hsp20/alpha crystallin family 45 142 1.2E-21 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AMBLS11_06735 a1868b1ae7e482fab0f3fc436198bc1f 149 Gene3D G3DSA:2.60.40.790 34 143 1.9E-26 T 14-10-2018 IPR008978 HSP20-like chaperone AMBLS11_10870 b0ac23a843d13e75c146ffecb99cb655 307 Pfam PF03466 LysR substrate binding domain 91 289 3.0E-29 T 14-10-2018 IPR005119 LysR, substrate-binding AMBLS11_10870 b0ac23a843d13e75c146ffecb99cb655 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_10870 b0ac23a843d13e75c146ffecb99cb655 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_10870 b0ac23a843d13e75c146ffecb99cb655 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_10870 b0ac23a843d13e75c146ffecb99cb655 307 Gene3D G3DSA:1.10.10.10 2 85 3.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMBLS11_10870 b0ac23a843d13e75c146ffecb99cb655 307 SUPERFAMILY SSF46785 5 90 2.5E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMBLS11_10870 b0ac23a843d13e75c146ffecb99cb655 307 Gene3D G3DSA:3.40.190.290 95 292 3.0E-26 T 14-10-2018 AMBLS11_10870 b0ac23a843d13e75c146ffecb99cb655 307 SUPERFAMILY SSF53850 92 291 8.49E-32 T 14-10-2018 AMBLS11_10870 b0ac23a843d13e75c146ffecb99cb655 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMBLS11_11110 74da7e14ee072d18995f6a4fee1631b9 618 Pfam PF05787 Bacterial protein of unknown function (DUF839) 237 609 4.9E-27 T 14-10-2018 IPR008557 Protein of unknown function DUF839 AMBLS11_17475 e5154dd1550325739ee048b03870594e 331 Pfam PF03601 Conserved hypothetical protein 698 11 312 1.1E-70 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AMBLS11_09405 c8f687f4f9e55a931c9fe950df46dcd6 585 Pfam PF11949 Protein of unknown function (DUF3466) 6 582 1.9E-75 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 AMBLS11_14795 35115ad7c780b51d921eb50b25fd13ef 538 SUPERFAMILY SSF81340 2 408 4.71E-79 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AMBLS11_14795 35115ad7c780b51d921eb50b25fd13ef 538 Gene3D G3DSA:1.10.3080.10 1 405 2.1E-80 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AMBLS11_14795 35115ad7c780b51d921eb50b25fd13ef 538 Pfam PF00654 Voltage gated chloride channel 67 387 2.8E-67 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMBLS11_14795 35115ad7c780b51d921eb50b25fd13ef 538 PRINTS PR00762 Chloride channel signature 143 162 8.7E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMBLS11_14795 35115ad7c780b51d921eb50b25fd13ef 538 PRINTS PR00762 Chloride channel signature 338 354 8.7E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMBLS11_14795 35115ad7c780b51d921eb50b25fd13ef 538 PRINTS PR00762 Chloride channel signature 92 111 8.7E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AMBLS11_12455 087c4b940767c77d6149e31d2ec933e5 139 Pfam PF08774 VRR-NUC domain 41 123 5.9E-10 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AMBLS11_12455 087c4b940767c77d6149e31d2ec933e5 139 Gene3D G3DSA:3.40.1350.10 5 139 6.9E-43 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMBLS11_12455 087c4b940767c77d6149e31d2ec933e5 139 SMART SM00990 8 125 0.0035 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AMBLS11_02785 aef3873471b08cca81500b39570bc7dc 691 Gene3D G3DSA:3.40.190.10 61 268 9.7E-8 T 14-10-2018 AMBLS11_02785 aef3873471b08cca81500b39570bc7dc 691 Gene3D G3DSA:3.40.190.10 124 227 9.7E-8 T 14-10-2018 AMBLS11_02785 aef3873471b08cca81500b39570bc7dc 691 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 269 4.9E-6 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMBLS11_02785 aef3873471b08cca81500b39570bc7dc 691 SUPERFAMILY SSF53850 297 681 1.86E-48 T 14-10-2018 AMBLS11_02785 aef3873471b08cca81500b39570bc7dc 691 Gene3D G3DSA:3.40.190.10 306 645 2.5E-96 T 14-10-2018 AMBLS11_02785 aef3873471b08cca81500b39570bc7dc 691 Gene3D G3DSA:3.40.190.10 393 674 2.5E-96 T 14-10-2018 AMBLS11_02785 aef3873471b08cca81500b39570bc7dc 691 Pfam PF01547 Bacterial extracellular solute-binding protein 334 580 1.1E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMBLS11_02785 aef3873471b08cca81500b39570bc7dc 691 SUPERFAMILY SSF53850 43 269 1.96E-19 T 14-10-2018 AMBLS11_15660 f33bc86db1249b16c03e9ed12ce29afa 468 Pfam PF00924 Mechanosensitive ion channel 156 405 4.3E-42 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_15660 f33bc86db1249b16c03e9ed12ce29afa 468 SUPERFAMILY SSF50182 193 260 3.92E-11 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_17795 76070935c8fcd63c6b7e31005d6460e7 473 SUPERFAMILY SSF55073 320 468 1.26E-28 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_17795 76070935c8fcd63c6b7e31005d6460e7 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 320 469 6.0E-25 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_17795 76070935c8fcd63c6b7e31005d6460e7 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 320 465 3.4E-27 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_17795 76070935c8fcd63c6b7e31005d6460e7 473 Gene3D G3DSA:3.30.70.270 313 471 3.6E-30 T 14-10-2018 AMBLS11_17795 76070935c8fcd63c6b7e31005d6460e7 473 SMART SM00267 299 470 1.9E-19 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_11350 9d1a062e230356269b0069dbde79a533 343 SUPERFAMILY SSF81324 35 141 8.63E-5 T 14-10-2018 AMBLS11_11350 9d1a062e230356269b0069dbde79a533 343 Gene3D G3DSA:1.20.120.350 36 152 7.9E-7 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily AMBLS11_04950 3a40b76f3743f575f0af13278d17534f 111 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 7 111 15.841 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMBLS11_04950 3a40b76f3743f575f0af13278d17534f 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 96 109 2.0E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMBLS11_04950 3a40b76f3743f575f0af13278d17534f 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 40 56 2.0E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMBLS11_04950 3a40b76f3743f575f0af13278d17534f 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 75 91 2.0E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMBLS11_04950 3a40b76f3743f575f0af13278d17534f 111 Pfam PF02049 Flagellar hook-basal body complex protein FliE 27 111 4.9E-28 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMBLS11_04950 3a40b76f3743f575f0af13278d17534f 111 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 6 110 4.6E-18 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMBLS11_17390 0c1d82faaae7ccab95c481ec46cf254c 333 Pfam PF13349 Putative adhesin 58 270 2.5E-8 T 14-10-2018 IPR025164 Putative adhesin AMBLS11_05235 a5b39d4cb4ed6c035da969ae42884b93 79 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 6 78 9.2E-31 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMBLS11_05235 a5b39d4cb4ed6c035da969ae42884b93 79 Pfam PF06667 Phage shock protein B 7 77 4.6E-34 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMBLS11_09745 8ad9f6bebff20baa4ac7d3181210752c 488 Pfam PF11840 Protein of unknown function (DUF3360) 3 483 1.2E-249 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 AMBLS11_14800 4110680d8493d88818e8371402511cac 142 PIRSF PIRSF004638 1 142 2.3E-49 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 AMBLS11_14800 4110680d8493d88818e8371402511cac 142 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 1.3E-47 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 AMBLS11_00820 81bbf71a39d03b022c2e21dd015fa024 269 Gene3D G3DSA:1.10.575.10 28 269 1.4E-63 T 14-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 AMBLS11_00820 81bbf71a39d03b022c2e21dd015fa024 269 Pfam PF02265 S1/P1 Nuclease 28 264 1.2E-64 T 14-10-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 AMBLS11_00820 81bbf71a39d03b022c2e21dd015fa024 269 SUPERFAMILY SSF48537 28 262 4.47E-58 T 14-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 AMBLS11_17075 cb6de0ba2c732b6d170d04ee36c3e4ee 688 Pfam PF01431 Peptidase family M13 484 685 1.4E-73 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_17075 cb6de0ba2c732b6d170d04ee36c3e4ee 688 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 476 488 1.9E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_17075 cb6de0ba2c732b6d170d04ee36c3e4ee 688 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 515 531 1.9E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_17075 cb6de0ba2c732b6d170d04ee36c3e4ee 688 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 586 597 1.9E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_17075 cb6de0ba2c732b6d170d04ee36c3e4ee 688 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 494 506 1.9E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMBLS11_17075 cb6de0ba2c732b6d170d04ee36c3e4ee 688 Gene3D G3DSA:1.10.1380.10 81 471 8.1E-243 T 14-10-2018 AMBLS11_17075 cb6de0ba2c732b6d170d04ee36c3e4ee 688 Gene3D G3DSA:3.40.390.10 50 688 8.1E-243 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMBLS11_17075 cb6de0ba2c732b6d170d04ee36c3e4ee 688 Pfam PF05649 Peptidase family M13 55 432 2.5E-101 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AMBLS11_17075 cb6de0ba2c732b6d170d04ee36c3e4ee 688 SUPERFAMILY SSF55486 40 688 1.2E-213 T 14-10-2018 AMBLS11_18995 d33ee97f3123b7098d946ce580cdf673 222 Gene3D G3DSA:1.10.8.1180 105 183 1.1E-13 T 14-10-2018 AMBLS11_00985 448e48629919c3704c6384342a13d7cc 194 SUPERFAMILY SSF53254 12 175 1.35E-10 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMBLS11_00985 448e48629919c3704c6384342a13d7cc 194 Gene3D G3DSA:3.40.50.1240 6 191 3.9E-8 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMBLS11_02765 beeec9b58d99e5582eeb3ac94650781c 238 Pfam PF00849 RNA pseudouridylate synthase 25 175 1.5E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_02765 beeec9b58d99e5582eeb3ac94650781c 238 SUPERFAMILY SSF55120 16 227 1.76E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_02765 beeec9b58d99e5582eeb3ac94650781c 238 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 62 76 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMBLS11_02765 beeec9b58d99e5582eeb3ac94650781c 238 Gene3D G3DSA:3.30.2350.10 6 225 5.5E-70 T 14-10-2018 AMBLS11_13855 f4df4b7d9cdc81e1139e3774af1ba2c0 313 SUPERFAMILY SSF53590 1 311 2.22E-93 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like AMBLS11_13855 f4df4b7d9cdc81e1139e3774af1ba2c0 313 Gene3D G3DSA:3.90.245.10 1 312 3.3E-106 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like AMBLS11_13855 f4df4b7d9cdc81e1139e3774af1ba2c0 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 303 3.7E-82 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMBLS11_13880 267c378c9fb3624ba2b1926f06e4884e 247 Pfam PF04338 Protein of unknown function, DUF481 32 246 1.2E-57 T 14-10-2018 IPR007433 Protein of unknown function DUF481 AMBLS11_13735 8e01988f91aae88223a474f1cad57b9d 102 Gene3D G3DSA:1.10.260.40 1 101 1.8E-14 T 14-10-2018 AMBLS11_13735 8e01988f91aae88223a474f1cad57b9d 102 SUPERFAMILY SSF47413 2 66 1.18E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_13735 8e01988f91aae88223a474f1cad57b9d 102 Pfam PF12844 Helix-turn-helix domain 4 60 5.3E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_13735 8e01988f91aae88223a474f1cad57b9d 102 SMART SM00530 5 60 1.6E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMBLS11_06140 58345341377ae5991869e66892369ab6 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 137 2.1E-28 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMBLS11_06140 58345341377ae5991869e66892369ab6 139 Gene3D G3DSA:3.30.420.270 56 128 2.5E-26 T 14-10-2018 AMBLS11_06140 58345341377ae5991869e66892369ab6 139 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 3 136 31.063 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AMBLS11_06140 58345341377ae5991869e66892369ab6 139 TIGRFAM TIGR02801 tolR: protein TolR 10 136 9.8E-46 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AMBLS11_17610 53a8aa7ba58bb64611aa007c354e7f45 77 Pfam PF11127 Protein of unknown function (DUF2892) 4 57 1.2E-13 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 AMBLS11_09060 aa970d7d7d835a876cf07b3e82ee150c 511 Gene3D G3DSA:1.25.40.10 108 288 2.3E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09060 aa970d7d7d835a876cf07b3e82ee150c 511 SUPERFAMILY SSF52172 5 118 6.01E-14 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_09060 aa970d7d7d835a876cf07b3e82ee150c 511 SUPERFAMILY SSF48452 140 455 2.76E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09060 aa970d7d7d835a876cf07b3e82ee150c 511 Gene3D G3DSA:1.25.40.10 315 471 1.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_09060 aa970d7d7d835a876cf07b3e82ee150c 511 Pfam PF00072 Response regulator receiver domain 6 97 3.0E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_09060 aa970d7d7d835a876cf07b3e82ee150c 511 Gene3D G3DSA:3.40.50.2300 1 107 7.3E-13 T 14-10-2018 AMBLS11_14730 23eb98c341877af619b129da539e8326 614 Gene3D G3DSA:3.90.1150.10 426 565 1.3E-18 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_14730 23eb98c341877af619b129da539e8326 614 Gene3D G3DSA:3.40.640.10 146 425 1.6E-48 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_14730 23eb98c341877af619b129da539e8326 614 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 153 561 1.7E-61 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMBLS11_14730 23eb98c341877af619b129da539e8326 614 SUPERFAMILY SSF53383 159 563 5.09E-53 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_17455 ad434586eb6cd3e5540c1c98a317059e 448 Pfam PF02687 FtsX-like permease family 348 434 1.6E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMBLS11_17455 ad434586eb6cd3e5540c1c98a317059e 448 Pfam PF12704 MacB-like periplasmic core domain 18 205 1.0E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMBLS11_00075 118f04745d30ffd67792b35a334f75e1 217 SUPERFAMILY SSF52317 1 216 2.82E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_00075 118f04745d30ffd67792b35a334f75e1 217 Gene3D G3DSA:3.40.50.880 1 217 4.4E-87 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_00075 118f04745d30ffd67792b35a334f75e1 217 PIRSF PIRSF006320 1 217 9.3E-102 T 14-10-2018 IPR026041 Glyoxalase ElbB AMBLS11_14475 60df56a5d8f13ec6bbf2d6c06bd2dd6f 278 Pfam PF11316 Putative rhamnosyl transferase 3 218 9.2E-51 T 14-10-2018 IPR021466 Putative rhamnosyl transferase AMBLS11_14475 60df56a5d8f13ec6bbf2d6c06bd2dd6f 278 SUPERFAMILY SSF53448 42 149 3.66E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_05650 c753f9424f7f84f0b3bddeee4b55f279 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 195 1.5E-9 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_05650 c753f9424f7f84f0b3bddeee4b55f279 201 PIRSF PIRSF000239 1 200 1.5E-57 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_05650 c753f9424f7f84f0b3bddeee4b55f279 201 Gene3D G3DSA:3.40.30.10 1 198 1.1E-72 T 14-10-2018 AMBLS11_05650 c753f9424f7f84f0b3bddeee4b55f279 201 SUPERFAMILY SSF52833 3 195 3.71E-67 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_05650 c753f9424f7f84f0b3bddeee4b55f279 201 Pfam PF00578 AhpC/TSA family 5 140 2.0E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMBLS11_17375 ca2e7c24ed31c773f0526e30c938a045 166 SUPERFAMILY SSF48295 34 115 4.45E-15 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMBLS11_03110 190f3fe396cfb2d7b60df5a6036c3ec9 393 SUPERFAMILY SSF56935 20 393 2.98E-27 T 14-10-2018 AMBLS11_06525 23b01f13966b2128ccc997f4cfaa9961 469 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AMBLS11_06525 23b01f13966b2128ccc997f4cfaa9961 469 SUPERFAMILY SSF51366 259 467 3.14E-52 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMBLS11_06525 23b01f13966b2128ccc997f4cfaa9961 469 Gene3D G3DSA:3.20.20.70 8 258 4.2E-166 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_06525 23b01f13966b2128ccc997f4cfaa9961 469 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 258 469 31.773 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AMBLS11_06525 23b01f13966b2128ccc997f4cfaa9961 469 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 255 1.2E-86 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AMBLS11_06525 23b01f13966b2128ccc997f4cfaa9961 469 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 260 463 1.1E-49 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AMBLS11_06525 23b01f13966b2128ccc997f4cfaa9961 469 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 257 33.5 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AMBLS11_06525 23b01f13966b2128ccc997f4cfaa9961 469 SUPERFAMILY SSF51366 1 256 2.59E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMBLS11_06525 23b01f13966b2128ccc997f4cfaa9961 469 Gene3D G3DSA:3.20.20.70 259 463 4.2E-166 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_05055 1c16a78db10d0e9bb120ddba764e3a50 127 Pfam PF00072 Response regulator receiver domain 7 119 7.0E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_05055 1c16a78db10d0e9bb120ddba764e3a50 127 SUPERFAMILY SSF52172 4 125 3.56E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMBLS11_05055 1c16a78db10d0e9bb120ddba764e3a50 127 Gene3D G3DSA:3.40.50.2300 1 126 7.6E-41 T 14-10-2018 AMBLS11_05055 1c16a78db10d0e9bb120ddba764e3a50 127 SMART SM00448 5 119 2.2E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMBLS11_11320 b0c46cfaa3af785656a929fd385048ac 368 Gene3D G3DSA:3.40.50.300 88 337 3.5E-81 T 14-10-2018 AMBLS11_11320 b0c46cfaa3af785656a929fd385048ac 368 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 95 339 3.8E-98 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMBLS11_11320 b0c46cfaa3af785656a929fd385048ac 368 Hamap MF_02040 Iron-sulfur cluster carrier protein. 91 340 36.182 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AMBLS11_11320 b0c46cfaa3af785656a929fd385048ac 368 SUPERFAMILY SSF52540 98 340 2.61E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_11320 b0c46cfaa3af785656a929fd385048ac 368 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 AMBLS11_18460 6b47ad9cf5ffb8354a81b4431326b500 1055 SUPERFAMILY SSF49313 655 735 6.75E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 AMBLS11_18460 6b47ad9cf5ffb8354a81b4431326b500 1055 Pfam PF00331 Glycosyl hydrolase family 10 342 639 2.2E-43 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMBLS11_18460 6b47ad9cf5ffb8354a81b4431326b500 1055 SMART SM00633 357 643 3.0E-13 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMBLS11_18460 6b47ad9cf5ffb8354a81b4431326b500 1055 Gene3D G3DSA:2.60.120.260 908 1052 6.4E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_18460 6b47ad9cf5ffb8354a81b4431326b500 1055 Gene3D G3DSA:2.60.120.260 751 897 1.4E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMBLS11_18460 6b47ad9cf5ffb8354a81b4431326b500 1055 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 569 579 - T 14-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMBLS11_18460 6b47ad9cf5ffb8354a81b4431326b500 1055 Gene3D G3DSA:3.20.20.80 322 645 3.2E-78 T 14-10-2018 AMBLS11_18460 6b47ad9cf5ffb8354a81b4431326b500 1055 SUPERFAMILY SSF51445 331 645 4.54E-68 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_18460 6b47ad9cf5ffb8354a81b4431326b500 1055 Gene3D G3DSA:2.60.40.60 646 737 4.6E-6 T 14-10-2018 AMBLS11_01110 b16614f7ca2f187138b13818ce9f4e18 77 Pfam PF13986 Domain of unknown function (DUF4224) 4 48 7.0E-19 T 14-10-2018 IPR025319 Domain of unknown function DUF4224 AMBLS11_06795 8cc2406f6415a37604eb70295e4e831d 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 7.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_06795 8cc2406f6415a37604eb70295e4e831d 196 SUPERFAMILY SSF46689 5 77 1.95E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_06795 8cc2406f6415a37604eb70295e4e831d 196 SUPERFAMILY SSF48498 74 187 7.05E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMBLS11_06795 8cc2406f6415a37604eb70295e4e831d 196 Gene3D G3DSA:1.10.357.10 3 192 7.4E-34 T 14-10-2018 AMBLS11_06795 8cc2406f6415a37604eb70295e4e831d 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 4.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_06795 8cc2406f6415a37604eb70295e4e831d 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 4.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_15990 50195048666f8e6de9a3456a0e6a2ae2 298 SUPERFAMILY SSF53850 101 240 9.6E-10 T 14-10-2018 AMBLS11_15990 50195048666f8e6de9a3456a0e6a2ae2 298 Pfam PF09084 NMT1/THI5 like 101 233 2.4E-5 T 14-10-2018 IPR015168 SsuA/THI5-like AMBLS11_15990 50195048666f8e6de9a3456a0e6a2ae2 298 Gene3D G3DSA:3.40.190.10 151 230 9.9E-8 T 14-10-2018 AMBLS11_15990 50195048666f8e6de9a3456a0e6a2ae2 298 Gene3D G3DSA:3.40.190.10 104 150 9.9E-8 T 14-10-2018 AMBLS11_00660 e421cb42c668ee52d3d7df526a6d6f62 381 Gene3D G3DSA:2.40.50.100 64 208 2.2E-71 T 14-10-2018 AMBLS11_00660 e421cb42c668ee52d3d7df526a6d6f62 381 Gene3D G3DSA:2.40.420.20 281 371 2.0E-22 T 14-10-2018 AMBLS11_00660 e421cb42c668ee52d3d7df526a6d6f62 381 Gene3D G3DSA:2.40.30.170 58 280 2.2E-71 T 14-10-2018 AMBLS11_00660 e421cb42c668ee52d3d7df526a6d6f62 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 369 2.6E-74 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_00660 e421cb42c668ee52d3d7df526a6d6f62 381 Gene3D G3DSA:1.10.287.470 99 172 2.2E-71 T 14-10-2018 AMBLS11_00660 e421cb42c668ee52d3d7df526a6d6f62 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 289 2.1E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_00660 e421cb42c668ee52d3d7df526a6d6f62 381 SUPERFAMILY SSF111369 55 293 1.7E-72 T 14-10-2018 AMBLS11_04810 6cf419777b25655d15462f486476b93e 1126 Pfam PF01973 Protein of unknown function DUF115 524 679 3.6E-28 T 14-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like AMBLS11_07915 6cd68ba43fede21f0a9ea271120aa836 339 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 7 339 32.059 T 14-10-2018 IPR003770 Endolytic murein transglycosylase AMBLS11_07915 6cd68ba43fede21f0a9ea271120aa836 339 Gene3D G3DSA:3.30.160.60 309 339 7.1E-13 T 14-10-2018 AMBLS11_07915 6cd68ba43fede21f0a9ea271120aa836 339 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 335 5.5E-83 T 14-10-2018 IPR003770 Endolytic murein transglycosylase AMBLS11_07915 6cd68ba43fede21f0a9ea271120aa836 339 Pfam PF02618 YceG-like family 42 334 4.4E-78 T 14-10-2018 IPR003770 Endolytic murein transglycosylase AMBLS11_15045 21177136415bbb0859dee4832aedd3da 159 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 138 1.6E-33 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ AMBLS11_11785 f0a4873a44176a140cbf411df5f447ac 231 SUPERFAMILY SSF47473 30 220 1.42E-15 T 14-10-2018 IPR011992 EF-hand domain pair AMBLS11_11785 f0a4873a44176a140cbf411df5f447ac 231 Pfam PF13202 EF hand 28 46 0.12 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 AMBLS11_11785 f0a4873a44176a140cbf411df5f447ac 231 Pfam PF13202 EF hand 173 188 5.5E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 AMBLS11_11785 f0a4873a44176a140cbf411df5f447ac 231 Gene3D G3DSA:1.10.238.10 22 84 1.2E-8 T 14-10-2018 AMBLS11_11785 f0a4873a44176a140cbf411df5f447ac 231 Gene3D G3DSA:1.10.238.10 157 226 6.7E-9 T 14-10-2018 AMBLS11_09850 68c54434b037c003bce11168c16d715d 232 SMART SM00934 5 226 9.8E-97 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_09850 68c54434b037c003bce11168c16d715d 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_09850 68c54434b037c003bce11168c16d715d 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 5.1E-54 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_09850 68c54434b037c003bce11168c16d715d 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 8.1E-60 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_09850 68c54434b037c003bce11168c16d715d 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 39.028 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMBLS11_09850 68c54434b037c003bce11168c16d715d 232 Gene3D G3DSA:3.20.20.70 1 231 1.6E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_09850 68c54434b037c003bce11168c16d715d 232 SUPERFAMILY SSF51366 2 230 7.36E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMBLS11_10765 39a33665ed4376497e4ca9a4da655ce6 72 Pfam PF11160 Protein of unknown function (DUF2945) 9 56 5.2E-7 T 14-10-2018 IPR021331 Protein of unknown function DUF2945 AMBLS11_13220 e03e66da193309e2dbd973d33bc0e257 301 Pfam PF03994 Domain of Unknown Function (DUF350) 93 145 1.4E-5 T 14-10-2018 IPR007140 Protein of unknown function DUF350 AMBLS11_10205 f993dfcea56540c2178314a4f936d602 123 Pfam PF06877 Regulator of ribonuclease activity B 24 121 1.3E-13 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain AMBLS11_10205 f993dfcea56540c2178314a4f936d602 123 SUPERFAMILY SSF89946 16 122 4.97E-15 T 14-10-2018 IPR036701 RraB-like superfamily AMBLS11_16025 3a2c1814f6864de6f69b29adcb5f2913 139 SUPERFAMILY SSF161084 9 131 4.97E-20 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMBLS11_16025 3a2c1814f6864de6f69b29adcb5f2913 139 Gene3D G3DSA:1.20.120.550 1 136 5.6E-19 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMBLS11_16025 3a2c1814f6864de6f69b29adcb5f2913 139 Pfam PF01124 MAPEG family 12 134 8.9E-17 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMBLS11_12335 793dcc9c64ce14c938e597fe9731554a 149 Pfam PF07030 Protein of unknown function (DUF1320) 3 114 4.2E-37 T 14-10-2018 IPR009752 Bacteriophage Mu, Gp36 AMBLS11_06585 8bbea3b5853151019d91cc5d9b81c428 428 Pfam PF04286 Protein of unknown function (DUF445) 53 425 2.6E-88 T 14-10-2018 IPR007383 Protein of unknown function DUF445 AMBLS11_09590 5bec2abf66723dc8f24c59566df1734b 241 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 8 237 53.609 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AMBLS11_09590 5bec2abf66723dc8f24c59566df1734b 241 Gene3D G3DSA:3.40.50.1220 10 229 9.4E-80 T 14-10-2018 AMBLS11_09590 5bec2abf66723dc8f24c59566df1734b 241 Gene3D G3DSA:3.30.1600.10 24 159 9.4E-80 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AMBLS11_09590 5bec2abf66723dc8f24c59566df1734b 241 SUPERFAMILY SSF52467 7 235 2.41E-71 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMBLS11_09590 5bec2abf66723dc8f24c59566df1734b 241 Pfam PF02146 Sir2 family 15 187 1.7E-48 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 AMBLS11_09020 2299e9131c59f02172cba2d4a9e9b3b5 344 SUPERFAMILY SSF52096 95 295 1.89E-26 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_09020 2299e9131c59f02172cba2d4a9e9b3b5 344 Pfam PF01343 Peptidase family S49 158 298 1.4E-39 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMBLS11_09020 2299e9131c59f02172cba2d4a9e9b3b5 344 Pfam PF08496 Peptidase family S49 N-terminal 2 154 9.1E-58 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AMBLS11_09020 2299e9131c59f02172cba2d4a9e9b3b5 344 Gene3D G3DSA:3.40.1750.20 198 262 3.4E-38 T 14-10-2018 AMBLS11_09020 2299e9131c59f02172cba2d4a9e9b3b5 344 Gene3D G3DSA:3.90.226.10 102 297 3.4E-38 T 14-10-2018 AMBLS11_16310 3b56844b909bcc9ccca4ee9dcc14826d 520 Pfam PF00535 Glycosyl transferase family 2 263 373 6.5E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_16310 3b56844b909bcc9ccca4ee9dcc14826d 520 Gene3D G3DSA:3.90.550.10 209 463 4.2E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_16310 3b56844b909bcc9ccca4ee9dcc14826d 520 SUPERFAMILY SSF53448 260 459 6.28E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_00865 0ec8b33889f4e6b998876c669521ddd4 139 SUPERFAMILY SSF54637 8 133 1.16E-35 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_00865 0ec8b33889f4e6b998876c669521ddd4 139 Pfam PF13279 Thioesterase-like superfamily 13 128 2.2E-15 T 14-10-2018 AMBLS11_00865 0ec8b33889f4e6b998876c669521ddd4 139 Gene3D G3DSA:3.10.129.10 8 135 4.8E-36 T 14-10-2018 AMBLS11_01185 de87f8fa5ba9960e4c4778c88fda7a1d 180 Pfam PF13508 Acetyltransferase (GNAT) domain 52 145 2.7E-9 T 14-10-2018 IPR000182 GNAT domain AMBLS11_01185 de87f8fa5ba9960e4c4778c88fda7a1d 180 Gene3D G3DSA:3.40.630.30 7 155 3.0E-29 T 14-10-2018 AMBLS11_01185 de87f8fa5ba9960e4c4778c88fda7a1d 180 SUPERFAMILY SSF55729 30 154 8.02E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMBLS11_05335 26a3bc7462d4e1813177078da22bf633 132 Gene3D G3DSA:3.30.420.270 60 128 1.8E-11 T 14-10-2018 AMBLS11_05335 26a3bc7462d4e1813177078da22bf633 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 130 1.0E-30 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMBLS11_18885 1075c799eee4e10e287778dfe9a060bf 155 Gene3D G3DSA:3.10.450.50 8 137 3.9E-13 T 14-10-2018 AMBLS11_18885 1075c799eee4e10e287778dfe9a060bf 155 SUPERFAMILY SSF54427 13 141 6.27E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_18885 1075c799eee4e10e287778dfe9a060bf 155 Pfam PF13474 SnoaL-like domain 26 140 6.5E-32 T 14-10-2018 IPR037401 SnoaL-like domain AMBLS11_02070 9291bf45cbe11a9da01f1c176d344494 192 SUPERFAMILY SSF48498 79 165 1.89E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMBLS11_02070 9291bf45cbe11a9da01f1c176d344494 192 SUPERFAMILY SSF46689 3 72 1.59E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_02070 9291bf45cbe11a9da01f1c176d344494 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 1.7E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_02070 9291bf45cbe11a9da01f1c176d344494 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 9.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_02070 9291bf45cbe11a9da01f1c176d344494 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 9.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMBLS11_02070 9291bf45cbe11a9da01f1c176d344494 192 Gene3D G3DSA:1.10.357.10 1 182 5.5E-32 T 14-10-2018 AMBLS11_02070 9291bf45cbe11a9da01f1c176d344494 192 Pfam PF13305 WHG domain 87 161 4.7E-8 T 14-10-2018 IPR025996 WHG domain AMBLS11_17850 5482351a3cea1795d0b4c99c2b5f32b8 522 Pfam PF04820 Tryptophan halogenase 10 473 3.4E-122 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMBLS11_17850 5482351a3cea1795d0b4c99c2b5f32b8 522 Gene3D G3DSA:3.50.50.60 3 518 5.0E-187 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_17850 5482351a3cea1795d0b4c99c2b5f32b8 522 PIRSF PIRSF011396 2 519 1.0E-168 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AMBLS11_17850 5482351a3cea1795d0b4c99c2b5f32b8 522 SUPERFAMILY SSF51905 5 443 7.34E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMBLS11_07590 e3e353d92263a1c0fa854792fcfbd74f 428 Pfam PF13692 Glycosyl transferases group 1 196 304 1.8E-16 T 14-10-2018 AMBLS11_07590 e3e353d92263a1c0fa854792fcfbd74f 428 SUPERFAMILY SSF53756 5 303 1.81E-15 T 14-10-2018 AMBLS11_07590 e3e353d92263a1c0fa854792fcfbd74f 428 Gene3D G3DSA:3.40.50.2000 190 375 7.9E-9 T 14-10-2018 AMBLS11_11255 89538bce1a9d33282c7d279453212fa2 314 Gene3D G3DSA:3.20.20.70 1 313 2.1E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_11255 89538bce1a9d33282c7d279453212fa2 314 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 267 1.9E-57 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMBLS11_11255 89538bce1a9d33282c7d279453212fa2 314 SUPERFAMILY SSF51395 1 305 1.73E-95 T 14-10-2018 AMBLS11_18050 9b0dbb9169816026088b07687f590948 174 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 6.9E-37 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AMBLS11_14360 42fbcbdc7cf20d92b4061c554324767c 432 Pfam PF07730 Histidine kinase 194 263 8.0E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMBLS11_08565 8a3d92a289881b3a253bcaf48bce3e8d 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AMBLS11_08565 8a3d92a289881b3a253bcaf48bce3e8d 52 Pfam PF01679 Proteolipid membrane potential modulator 2 49 6.2E-24 T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AMBLS11_10385 c9b3ebed50d789eb4a378e9ef1660819 721 Pfam PF10459 Peptidase S46 22 719 2.3E-258 T 14-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 AMBLS11_10385 c9b3ebed50d789eb4a378e9ef1660819 721 SUPERFAMILY SSF50494 48 714 2.04E-21 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMBLS11_00130 f91904739779b3a77c313c7c1e6c29e0 180 SUPERFAMILY SSF57783 22 62 2.38E-10 T 14-10-2018 AMBLS11_00130 f91904739779b3a77c313c7c1e6c29e0 180 SUPERFAMILY SSF57783 67 108 5.61E-12 T 14-10-2018 AMBLS11_00130 f91904739779b3a77c313c7c1e6c29e0 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 57 4.9E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMBLS11_00130 f91904739779b3a77c313c7c1e6c29e0 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 111 147 3.8E-12 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMBLS11_00130 f91904739779b3a77c313c7c1e6c29e0 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 69 105 9.2E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMBLS11_00130 f91904739779b3a77c313c7c1e6c29e0 180 Gene3D G3DSA:3.30.65.10 21 65 4.5E-5 T 14-10-2018 AMBLS11_00130 f91904739779b3a77c313c7c1e6c29e0 180 Gene3D G3DSA:3.30.65.10 66 111 1.4E-5 T 14-10-2018 AMBLS11_00130 f91904739779b3a77c313c7c1e6c29e0 180 SUPERFAMILY SSF57783 111 146 7.99E-5 T 14-10-2018 AMBLS11_16665 b9c28ffbb3360760bae471c2d915f064 109 SUPERFAMILY SSF89447 9 48 3.14E-5 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily AMBLS11_16665 b9c28ffbb3360760bae471c2d915f064 109 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 6 98 2.0E-21 T 14-10-2018 AMBLS11_16665 b9c28ffbb3360760bae471c2d915f064 109 Gene3D G3DSA:2.10.260.10 5 48 2.0E-5 T 14-10-2018 AMBLS11_16665 b9c28ffbb3360760bae471c2d915f064 109 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 9 106 1.6E-33 T 14-10-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 AMBLS11_17225 8e6e5550952d2a034e21aebbf6bfe126 332 Pfam PF03280 Proteobacterial lipase chaperone protein 136 322 7.8E-38 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AMBLS11_17225 8e6e5550952d2a034e21aebbf6bfe126 332 SUPERFAMILY SSF158855 83 330 2.62E-54 T 14-10-2018 AMBLS11_09800 6ff35ce6be36eb6022d8615dd57f234e 208 Pfam PF00326 Prolyl oligopeptidase family 3 207 8.6E-48 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMBLS11_09800 6ff35ce6be36eb6022d8615dd57f234e 208 Gene3D G3DSA:3.40.50.1820 1 208 2.4E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_09800 6ff35ce6be36eb6022d8615dd57f234e 208 SUPERFAMILY SSF53474 5 206 1.56E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_07220 932aa2d7266c72f6c8cad189e230f95f 378 PIRSF PIRSF013171 10 378 2.8E-90 T 14-10-2018 IPR009486 Purine nucleoside permease GO:0055085 AMBLS11_07220 932aa2d7266c72f6c8cad189e230f95f 378 Pfam PF06516 Purine nucleoside permease (NUP) 48 371 2.9E-107 T 14-10-2018 IPR009486 Purine nucleoside permease GO:0055085 AMBLS11_13075 191bb609dc7a07f6255f0e7112fe7467 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 265 2.8E-55 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMBLS11_13075 191bb609dc7a07f6255f0e7112fe7467 338 Gene3D G3DSA:3.90.25.10 183 331 1.3E-96 T 14-10-2018 AMBLS11_13075 191bb609dc7a07f6255f0e7112fe7467 338 Gene3D G3DSA:3.40.50.720 4 319 1.3E-96 T 14-10-2018 AMBLS11_13075 191bb609dc7a07f6255f0e7112fe7467 338 SUPERFAMILY SSF51735 1 337 1.55E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_13075 191bb609dc7a07f6255f0e7112fe7467 338 PRINTS PR01713 Nucleotide sugar epimerase signature 259 274 1.0E-28 T 14-10-2018 AMBLS11_13075 191bb609dc7a07f6255f0e7112fe7467 338 PRINTS PR01713 Nucleotide sugar epimerase signature 219 234 1.0E-28 T 14-10-2018 AMBLS11_13075 191bb609dc7a07f6255f0e7112fe7467 338 PRINTS PR01713 Nucleotide sugar epimerase signature 298 315 1.0E-28 T 14-10-2018 AMBLS11_13075 191bb609dc7a07f6255f0e7112fe7467 338 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.0E-28 T 14-10-2018 AMBLS11_05370 a19ab3a606f671f1b79065c42fe26e13 214 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 16 198 1.3E-14 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMBLS11_05370 a19ab3a606f671f1b79065c42fe26e13 214 Pfam PF04973 Nicotinamide mononucleotide transporter 16 194 8.0E-36 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMBLS11_11810 51b5800cea6aaf8aa63ea2e5b8b97a0c 160 Pfam PF10003 Integral membrane protein (DUF2244) 15 148 1.6E-26 T 14-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane AMBLS11_03635 285abfa742141546bb30cd9ecc2bb42a 157 Pfam PF02470 MlaD protein 38 117 8.7E-20 T 14-10-2018 IPR003399 Mce/MlaD AMBLS11_03635 285abfa742141546bb30cd9ecc2bb42a 157 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 151 3.8E-53 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AMBLS11_04675 6b0e2b45cf3273326d82732aa7a5c786 195 SUPERFAMILY SSF160443 98 179 3.66E-8 T 14-10-2018 IPR036063 Smr domain superfamily AMBLS11_04675 6b0e2b45cf3273326d82732aa7a5c786 195 Gene3D G3DSA:3.30.1370.110 50 185 2.6E-36 T 14-10-2018 AMBLS11_04675 6b0e2b45cf3273326d82732aa7a5c786 195 Pfam PF01713 Smr domain 100 179 1.3E-14 T 14-10-2018 IPR002625 Smr domain AMBLS11_03170 2070ff70887f098f094fdfe82b0968de 123 Pfam PF01230 HIT domain 12 107 6.5E-27 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMBLS11_03170 2070ff70887f098f094fdfe82b0968de 123 SUPERFAMILY SSF54197 2 113 5.72E-37 T 14-10-2018 IPR036265 HIT-like superfamily AMBLS11_03170 2070ff70887f098f094fdfe82b0968de 123 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 14-10-2018 IPR019808 Histidine triad, conserved site AMBLS11_03170 2070ff70887f098f094fdfe82b0968de 123 Gene3D G3DSA:3.30.428.10 1 114 2.7E-37 T 14-10-2018 IPR036265 HIT-like superfamily AMBLS11_03170 2070ff70887f098f094fdfe82b0968de 123 PRINTS PR00332 Histidine triad family signature 26 44 4.8E-21 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMBLS11_03170 2070ff70887f098f094fdfe82b0968de 123 PRINTS PR00332 Histidine triad family signature 5 21 4.8E-21 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMBLS11_03170 2070ff70887f098f094fdfe82b0968de 123 PRINTS PR00332 Histidine triad family signature 94 104 4.8E-21 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMBLS11_01525 033f099529bdaf7c41ac8115592c9c72 209 Gene3D G3DSA:3.30.1330.200 17 177 3.3E-46 T 14-10-2018 IPR038592 CheD-like superfamily AMBLS11_01525 033f099529bdaf7c41ac8115592c9c72 209 Pfam PF03975 CheD chemotactic sensory transduction 62 166 1.2E-26 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMBLS11_01525 033f099529bdaf7c41ac8115592c9c72 209 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 15 170 26.224 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMBLS11_01525 033f099529bdaf7c41ac8115592c9c72 209 SUPERFAMILY SSF64438 20 170 9.15E-46 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMBLS11_05995 215bb6450ce6776ca63df0ad7777796d 238 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 215 1.4E-25 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMBLS11_05995 215bb6450ce6776ca63df0ad7777796d 238 Gene3D G3DSA:3.90.226.10 2 231 2.0E-42 T 14-10-2018 AMBLS11_05995 215bb6450ce6776ca63df0ad7777796d 238 SUPERFAMILY SSF52096 2 208 8.35E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_11685 e82aff368a4e78f7b55bd2ba56d63254 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 510 1.8E-251 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AMBLS11_11685 e82aff368a4e78f7b55bd2ba56d63254 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 510 2.5E-260 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AMBLS11_11685 e82aff368a4e78f7b55bd2ba56d63254 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 349.753 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AMBLS11_02610 491a3694cc4104ce969bfb864f3dee77 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.1E-44 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02610 491a3694cc4104ce969bfb864f3dee77 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.003 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02610 491a3694cc4104ce969bfb864f3dee77 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_02610 491a3694cc4104ce969bfb864f3dee77 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.7E-39 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_02610 491a3694cc4104ce969bfb864f3dee77 103 SUPERFAMILY SSF141091 1 102 1.44E-38 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_15100 fc0abdd2e15a07f6ecbd45a7c9d7ce36 259 SUPERFAMILY SSF52833 126 258 3.46E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_15100 fc0abdd2e15a07f6ecbd45a7c9d7ce36 259 Pfam PF08534 Redoxin 141 246 6.4E-13 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMBLS11_15100 fc0abdd2e15a07f6ecbd45a7c9d7ce36 259 ProSitePatterns PS00194 Thioredoxin family active site. 152 170 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMBLS11_15100 fc0abdd2e15a07f6ecbd45a7c9d7ce36 259 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 7 97 2.3E-11 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMBLS11_15100 fc0abdd2e15a07f6ecbd45a7c9d7ce36 259 Gene3D G3DSA:3.40.30.10 121 259 5.6E-33 T 14-10-2018 AMBLS11_08320 aa505c1f1ae0ddae6539d942249fca4a 138 Pfam PF16108 Domain of unknown function (DUF4826) 13 137 5.8E-49 T 14-10-2018 IPR032251 Protein of unknown function DUF4826 AMBLS11_00045 c80d2f79f3ca6cdb0cdbad1469b89fb2 153 Pfam PF10675 Protein of unknown function (DUF2489) 14 139 3.7E-42 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 AMBLS11_00045 c80d2f79f3ca6cdb0cdbad1469b89fb2 153 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 55 - T 14-10-2018 IPR010916 TonB box, conserved site AMBLS11_04520 caf3fdc8d8a75bdacdf36575e4b4ca59 349 Pfam PF12069 Protein of unknown function (DUF3549) 4 344 3.8E-99 T 14-10-2018 IPR021936 Protein of unknown function DUF3549 AMBLS11_13310 39ee904695cf0f86b133e532ea788048 73 Pfam PF13744 Helix-turn-helix domain 6 62 8.2E-8 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain AMBLS11_13310 39ee904695cf0f86b133e532ea788048 73 SUPERFAMILY SSF47413 5 67 6.57E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_13310 39ee904695cf0f86b133e532ea788048 73 Gene3D G3DSA:1.10.260.40 1 64 7.3E-10 T 14-10-2018 AMBLS11_12885 d334f29a90e77c2d0f66d797bcef18db 136 SUPERFAMILY SSF82649 4 134 2.51E-44 T 14-10-2018 AMBLS11_12885 d334f29a90e77c2d0f66d797bcef18db 136 Pfam PF02657 Fe-S metabolism associated domain 11 130 3.2E-45 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AMBLS11_12885 d334f29a90e77c2d0f66d797bcef18db 136 Gene3D G3DSA:3.90.1010.10 1 136 8.3E-48 T 14-10-2018 AMBLS11_00730 30e45efa99706c6b41c357eeb8e1d618 222 Gene3D G3DSA:1.20.1050.10 85 212 3.9E-25 T 14-10-2018 AMBLS11_00730 30e45efa99706c6b41c357eeb8e1d618 222 SUPERFAMILY SSF52833 1 77 3.2E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_00730 30e45efa99706c6b41c357eeb8e1d618 222 Gene3D G3DSA:3.40.30.10 1 82 3.7E-32 T 14-10-2018 AMBLS11_00730 30e45efa99706c6b41c357eeb8e1d618 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 75 4.0E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_00730 30e45efa99706c6b41c357eeb8e1d618 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 148 207 1.1E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMBLS11_00730 30e45efa99706c6b41c357eeb8e1d618 222 SUPERFAMILY SSF47616 85 217 5.15E-21 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_07470 a98f09a856cb588c60f8216f5030d3ee 283 Pfam PF00535 Glycosyl transferase family 2 6 147 4.2E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_07470 a98f09a856cb588c60f8216f5030d3ee 283 SUPERFAMILY SSF53448 5 214 5.55E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07470 a98f09a856cb588c60f8216f5030d3ee 283 Gene3D G3DSA:3.90.550.10 1 246 4.6E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_03035 3ec736d76c2413d39687de50d3fbea27 650 Pfam PF00593 TonB dependent receptor 201 648 1.1E-43 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_03035 3ec736d76c2413d39687de50d3fbea27 650 SUPERFAMILY SSF56935 40 648 7.98E-105 T 14-10-2018 AMBLS11_03035 3ec736d76c2413d39687de50d3fbea27 650 Gene3D G3DSA:2.170.130.10 36 167 2.1E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_03035 3ec736d76c2413d39687de50d3fbea27 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 162 9.4E-25 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_03035 3ec736d76c2413d39687de50d3fbea27 650 Gene3D G3DSA:2.40.170.20 173 650 7.0E-85 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_10945 c79c3b7e15dab67fc87d346a79a6acd6 980 Pfam PF03993 Domain of Unknown Function (DUF349) 701 750 3.9E-6 T 14-10-2018 IPR007139 Protein of unknown function DUF349 AMBLS11_10945 c79c3b7e15dab67fc87d346a79a6acd6 980 Pfam PF03993 Domain of Unknown Function (DUF349) 610 682 1.3E-9 T 14-10-2018 IPR007139 Protein of unknown function DUF349 AMBLS11_12395 53ceb492139dea7416cea8fdaceea734 142 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 47 142 1.0E-7 T 14-10-2018 IPR004914 Antirestriction protein AMBLS11_12395 53ceb492139dea7416cea8fdaceea734 142 Gene3D G3DSA:1.10.472.120 1 142 7.6E-30 T 14-10-2018 AMBLS11_12395 53ceb492139dea7416cea8fdaceea734 142 Pfam PF03230 Antirestriction protein 47 142 4.9E-15 T 14-10-2018 IPR004914 Antirestriction protein AMBLS11_17585 06063b31c9f718250507ddc45566b94c 260 Pfam PF01925 Sulfite exporter TauE/SafE 23 247 2.1E-16 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMBLS11_13745 bf239be90aef000f2998152b04380eaa 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMBLS11_13745 bf239be90aef000f2998152b04380eaa 129 Pfam PF01597 Glycine cleavage H-protein 8 128 1.4E-47 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AMBLS11_13745 bf239be90aef000f2998152b04380eaa 129 SUPERFAMILY SSF51230 3 128 4.45E-47 T 14-10-2018 IPR011053 Single hybrid motif AMBLS11_13745 bf239be90aef000f2998152b04380eaa 129 Gene3D G3DSA:2.40.50.100 2 129 1.8E-51 T 14-10-2018 AMBLS11_13745 bf239be90aef000f2998152b04380eaa 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 128 5.1E-55 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMBLS11_13745 bf239be90aef000f2998152b04380eaa 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.84 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMBLS11_13185 1b3af24296113ed3ae3317d7b8ecc80b 470 Gene3D G3DSA:3.40.50.720 141 258 1.3E-7 T 14-10-2018 AMBLS11_13185 1b3af24296113ed3ae3317d7b8ecc80b 470 Pfam PF02397 Bacterial sugar transferase 282 465 1.3E-62 T 14-10-2018 IPR003362 Bacterial sugar transferase AMBLS11_13185 1b3af24296113ed3ae3317d7b8ecc80b 470 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 469 8.3E-108 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMBLS11_13185 1b3af24296113ed3ae3317d7b8ecc80b 470 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 26 469 4.7E-161 T 14-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated AMBLS11_18790 78e22fb40c09fcf0006322bfecb7c642 430 SUPERFAMILY SSF51338 21 427 5.47E-16 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_18790 78e22fb40c09fcf0006322bfecb7c642 430 Pfam PF01979 Amidohydrolase family 76 426 1.7E-53 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMBLS11_18790 78e22fb40c09fcf0006322bfecb7c642 430 Gene3D G3DSA:3.20.20.140 82 390 6.2E-141 T 14-10-2018 AMBLS11_18790 78e22fb40c09fcf0006322bfecb7c642 430 SUPERFAMILY SSF51556 80 391 1.8E-110 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_18790 78e22fb40c09fcf0006322bfecb7c642 430 Gene3D G3DSA:2.30.40.10 29 425 6.2E-141 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMBLS11_01050 bb122e4d9d823100f7de4158eef3e077 443 Pfam PF01523 Putative modulator of DNA gyrase 28 320 3.9E-55 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AMBLS11_01050 bb122e4d9d823100f7de4158eef3e077 443 Gene3D G3DSA:3.30.2290.10 2 229 3.5E-84 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AMBLS11_01050 bb122e4d9d823100f7de4158eef3e077 443 SUPERFAMILY SSF111283 8 442 1.12E-122 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AMBLS11_02030 e1411d553636b117aca3dc7da063d025 192 Pfam PF05137 Fimbrial assembly protein (PilN) 101 176 8.2E-19 T 14-10-2018 IPR007813 Fimbrial assembly PilN AMBLS11_15770 cb1ddd29ce590b5e28f3b1db3f25614c 207 SUPERFAMILY SSF51735 1 202 4.83E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15770 cb1ddd29ce590b5e28f3b1db3f25614c 207 Gene3D G3DSA:3.40.50.720 1 205 2.0E-52 T 14-10-2018 AMBLS11_15770 cb1ddd29ce590b5e28f3b1db3f25614c 207 Pfam PF13460 NAD(P)H-binding 8 126 2.5E-8 T 14-10-2018 IPR016040 NAD(P)-binding domain AMBLS11_13215 859fcaea798ffbd76e2ec1ebafb10447 115 SMART SM00465 19 100 1.5E-4 T 14-10-2018 IPR000305 GIY-YIG endonuclease AMBLS11_13215 859fcaea798ffbd76e2ec1ebafb10447 115 SUPERFAMILY SSF82771 21 96 6.41E-9 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMBLS11_13215 859fcaea798ffbd76e2ec1ebafb10447 115 Gene3D G3DSA:3.40.1440.10 16 113 2.0E-22 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMBLS11_13215 859fcaea798ffbd76e2ec1ebafb10447 115 Pfam PF01541 GIY-YIG catalytic domain 21 93 9.2E-13 T 14-10-2018 IPR000305 GIY-YIG endonuclease AMBLS11_12110 23d7dab038381d3a55da6c88fd951fe8 191 SUPERFAMILY SSF88697 5 190 1.89E-44 T 14-10-2018 IPR015947 PUA-like superfamily AMBLS11_12110 23d7dab038381d3a55da6c88fd951fe8 191 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 7 176 4.3E-11 T 14-10-2018 IPR003111 Lon, substrate-binding domain AMBLS11_12110 23d7dab038381d3a55da6c88fd951fe8 191 Gene3D G3DSA:2.30.130.40 3 113 1.1E-27 T 14-10-2018 AMBLS11_10715 411b04e078cd32ace7cacbc1a04e4e30 81 Pfam PF12838 4Fe-4S dicluster domain 8 57 1.4E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMBLS11_10715 411b04e078cd32ace7cacbc1a04e4e30 81 Gene3D G3DSA:3.30.70.20 2 81 5.2E-31 T 14-10-2018 AMBLS11_10715 411b04e078cd32ace7cacbc1a04e4e30 81 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMBLS11_10715 411b04e078cd32ace7cacbc1a04e4e30 81 SUPERFAMILY SSF54862 5 70 4.19E-18 T 14-10-2018 AMBLS11_10730 0781a5a11fccc87916cee1ab9fb8c8f7 393 Pfam PF00155 Aminotransferase class I and II 62 388 8.9E-45 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMBLS11_10730 0781a5a11fccc87916cee1ab9fb8c8f7 393 SUPERFAMILY SSF53383 59 392 1.34E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMBLS11_10730 0781a5a11fccc87916cee1ab9fb8c8f7 393 Gene3D G3DSA:3.90.1150.10 60 380 1.9E-85 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMBLS11_10730 0781a5a11fccc87916cee1ab9fb8c8f7 393 Gene3D G3DSA:3.40.640.10 76 296 1.9E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMBLS11_04535 d08edf13fc21bdd62244fc8834b8158f 149 SUPERFAMILY SSF52218 1 147 5.83E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_04535 d08edf13fc21bdd62244fc8834b8158f 149 Pfam PF00258 Flavodoxin 6 139 8.9E-24 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMBLS11_04535 d08edf13fc21bdd62244fc8834b8158f 149 Gene3D G3DSA:3.40.50.360 1 148 1.6E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_14280 655ff211dca0c93a6e783f63eb2d3142 240 Pfam PF03591 AzlC protein 19 157 3.5E-39 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease AMBLS11_12480 0bde333f53c0c666f60904294b3a91d2 64 SUPERFAMILY SSF47413 1 55 2.31E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_12480 0bde333f53c0c666f60904294b3a91d2 64 Pfam PF14549 DNA-binding transcriptional regulator Cro 2 58 1.7E-10 T 14-10-2018 AMBLS11_12480 0bde333f53c0c666f60904294b3a91d2 64 Gene3D G3DSA:1.10.260.40 1 58 6.9E-14 T 14-10-2018 AMBLS11_03585 ae4f07aea33bf118e189ce1d11ecf77c 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.3E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMBLS11_03585 ae4f07aea33bf118e189ce1d11ecf77c 95 SUPERFAMILY SSF69754 1 95 3.4E-36 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMBLS11_03585 ae4f07aea33bf118e189ce1d11ecf77c 95 Gene3D G3DSA:3.30.160.100 1 95 1.1E-37 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMBLS11_03585 ae4f07aea33bf118e189ce1d11ecf77c 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.4E-34 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMBLS11_09340 7056b14b39b5cd5cd31c9f201eb10227 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 2.2E-11 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_09340 7056b14b39b5cd5cd31c9f201eb10227 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 2.2E-11 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_09340 7056b14b39b5cd5cd31c9f201eb10227 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 318 338 2.2E-11 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_09340 7056b14b39b5cd5cd31c9f201eb10227 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 2.2E-11 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_09340 7056b14b39b5cd5cd31c9f201eb10227 444 Pfam PF00209 Sodium:neurotransmitter symporter family 4 120 3.2E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_09340 7056b14b39b5cd5cd31c9f201eb10227 444 Pfam PF00209 Sodium:neurotransmitter symporter family 141 443 2.4E-23 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMBLS11_09340 7056b14b39b5cd5cd31c9f201eb10227 444 SUPERFAMILY SSF161070 4 443 1.83E-115 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AMBLS11_15470 dd1b80742a6f294f7d508f0aa96c151e 273 Pfam PF01925 Sulfite exporter TauE/SafE 13 267 1.5E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMBLS11_13530 337bb61b78b3cbf51a7c6b1b7fb7b68b 386 Gene3D G3DSA:1.20.1250.20 13 193 8.5E-15 T 14-10-2018 AMBLS11_13530 337bb61b78b3cbf51a7c6b1b7fb7b68b 386 SUPERFAMILY SSF103473 17 382 1.83E-34 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_13530 337bb61b78b3cbf51a7c6b1b7fb7b68b 386 Pfam PF07690 Major Facilitator Superfamily 18 343 9.9E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_13530 337bb61b78b3cbf51a7c6b1b7fb7b68b 386 Gene3D G3DSA:1.20.1250.20 202 382 5.1E-9 T 14-10-2018 AMBLS11_11585 3b87a3a24e1f3cbf3651eacb71aca0d0 387 Pfam PF01513 ATP-NAD kinase 18 381 1.1E-42 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMBLS11_11585 3b87a3a24e1f3cbf3651eacb71aca0d0 387 SUPERFAMILY SSF111331 82 154 1.11E-7 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMBLS11_11585 3b87a3a24e1f3cbf3651eacb71aca0d0 387 PIRSF PIRSF016907 15 387 7.6E-124 T 14-10-2018 IPR011386 Putative ATP-NAD kinase AMBLS11_11585 3b87a3a24e1f3cbf3651eacb71aca0d0 387 Gene3D G3DSA:3.40.50.10330 78 156 2.5E-5 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMBLS11_13845 a90c0f7fe486f29de4c9c265f1cd191e 188 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 174 3.4E-40 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 AMBLS11_13845 a90c0f7fe486f29de4c9c265f1cd191e 188 SUPERFAMILY SSF101327 5 173 8.11E-44 T 14-10-2018 IPR036255 YgfB-like superfamily AMBLS11_13845 a90c0f7fe486f29de4c9c265f1cd191e 188 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 12 153 1.1E-16 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 AMBLS11_13845 a90c0f7fe486f29de4c9c265f1cd191e 188 Gene3D G3DSA:1.20.120.740 2 188 6.5E-55 T 14-10-2018 AMBLS11_15760 521a65338b7bc3d312b18a139135a651 162 Pfam PF10688 Bacterial inner membrane protein 4 159 2.4E-25 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AMBLS11_03535 fa58c171b4d7363f143652f64e0b6b28 244 SUPERFAMILY SSF46626 16 208 4.15E-51 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_03535 fa58c171b4d7363f143652f64e0b6b28 244 PRINTS PR00603 Cytochrome C1 signature 42 61 8.1E-6 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMBLS11_03535 fa58c171b4d7363f143652f64e0b6b28 244 PRINTS PR00603 Cytochrome C1 signature 190 209 8.1E-6 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMBLS11_03535 fa58c171b4d7363f143652f64e0b6b28 244 PRINTS PR00603 Cytochrome C1 signature 209 224 8.1E-6 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMBLS11_03535 fa58c171b4d7363f143652f64e0b6b28 244 PRINTS PR00603 Cytochrome C1 signature 22 41 8.1E-6 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMBLS11_03535 fa58c171b4d7363f143652f64e0b6b28 244 Pfam PF02167 Cytochrome C1 family 30 243 8.9E-21 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMBLS11_03535 fa58c171b4d7363f143652f64e0b6b28 244 Gene3D G3DSA:1.10.760.10 24 209 6.8E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_09360 6abbe1e487818430f478b65311d90e5a 686 Pfam PF06980 Protein of unknown function (DUF1302) 33 685 6.3E-185 T 14-10-2018 IPR010727 Protein of unknown function DUF1302 AMBLS11_14970 ba352eb21f6e21bd097abc95f78cfe75 377 Pfam PF13795 HupE / UreJ protein 189 350 1.8E-42 T 14-10-2018 IPR032809 Putative HupE/UreJ protein AMBLS11_16800 feef1b6c3600ecea1e00a626d4dfe547 200 Pfam PF01914 MarC family integral membrane protein 4 192 5.8E-54 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMBLS11_16800 feef1b6c3600ecea1e00a626d4dfe547 200 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 189 9.8E-31 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMBLS11_05810 ed221703983994d26080dc2054daaadf 655 Gene3D G3DSA:3.30.70.270 494 654 1.5E-41 T 14-10-2018 AMBLS11_05810 ed221703983994d26080dc2054daaadf 655 Pfam PF00990 Diguanylate cyclase, GGDEF domain 496 648 1.6E-34 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05810 ed221703983994d26080dc2054daaadf 655 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 495 651 6.1E-38 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05810 ed221703983994d26080dc2054daaadf 655 SMART SM00267 484 653 9.6E-39 T 14-10-2018 IPR000160 GGDEF domain AMBLS11_05810 ed221703983994d26080dc2054daaadf 655 SUPERFAMILY SSF55073 501 652 1.41E-35 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_09820 8d558ce690e75278a0f1322d45149146 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 8 126 18.498 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMBLS11_09820 8d558ce690e75278a0f1322d45149146 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 10 120 1.1E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMBLS11_09820 8d558ce690e75278a0f1322d45149146 127 TIGRFAM TIGR00494 crcB: protein CrcB 11 123 5.2E-30 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMBLS11_15075 3a1da93e84b43c03bd92ccd5e5e5ecde 387 Pfam PF01594 AI-2E family transporter 29 373 3.3E-43 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like AMBLS11_06975 44ccd8448557f05e4ad7a3ac22b71adb 377 Pfam PF01882 Protein of unknown function DUF58 248 295 1.0E-4 T 14-10-2018 IPR002881 Domain of unknown function DUF58 AMBLS11_11730 102bad04119776e8ee116780937af1dd 279 Gene3D G3DSA:3.40.50.1820 4 272 5.7E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_11730 102bad04119776e8ee116780937af1dd 279 SUPERFAMILY SSF53474 10 278 3.11E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_11730 102bad04119776e8ee116780937af1dd 279 Pfam PF00561 alpha/beta hydrolase fold 24 132 3.6E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_11730 102bad04119776e8ee116780937af1dd 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_11730 102bad04119776e8ee116780937af1dd 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_11730 102bad04119776e8ee116780937af1dd 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 1.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMBLS11_03245 4dd23d3b6897120f431a2e7e0d302f5d 172 Pfam PF01618 MotA/TolQ/ExbB proton channel family 61 165 2.3E-21 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMBLS11_13230 5e01591a1cb37726838a0f655edc0c0c 205 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 115 190 7.5E-16 T 14-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal AMBLS11_15560 e492919504c38775645cb079b5891c2d 278 Pfam PF10987 Protein of unknown function (DUF2806) 51 267 2.9E-73 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 AMBLS11_15560 e492919504c38775645cb079b5891c2d 278 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 28 277 3.3E-93 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 AMBLS11_16805 54e6c6fd44f94702b6e8a4a74a592a1d 60 SUPERFAMILY SSF46955 3 51 8.55E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_16805 54e6c6fd44f94702b6e8a4a74a592a1d 60 Gene3D G3DSA:1.10.1660.10 2 59 3.4E-5 T 14-10-2018 AMBLS11_01030 9e9bb2148f0a9718aa91ae5122bc56cf 272 Pfam PF00795 Carbon-nitrogen hydrolase 7 256 1.1E-45 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMBLS11_01030 9e9bb2148f0a9718aa91ae5122bc56cf 272 Gene3D G3DSA:3.60.110.10 1 270 4.2E-80 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMBLS11_01030 9e9bb2148f0a9718aa91ae5122bc56cf 272 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 152 172 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AMBLS11_01030 9e9bb2148f0a9718aa91ae5122bc56cf 272 SUPERFAMILY SSF56317 2 264 7.98E-68 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMBLS11_05560 21b95adb9f9f5fa84ec80646502c0108 212 SUPERFAMILY SSF53955 25 175 5.96E-26 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMBLS11_05560 21b95adb9f9f5fa84ec80646502c0108 212 Gene3D G3DSA:1.10.530.10 42 198 4.2E-13 T 14-10-2018 AMBLS11_15015 d9fd99f57d141d92855b90e85a370bdd 119 Pfam PF04972 BON domain 51 115 8.5E-9 T 14-10-2018 IPR007055 BON domain AMBLS11_13435 de0b1cf7a00f15bf0569de2e3f1dd1c7 196 Gene3D G3DSA:3.30.160.670 33 194 9.4E-11 T 14-10-2018 AMBLS11_13435 de0b1cf7a00f15bf0569de2e3f1dd1c7 196 Pfam PF13590 Domain of unknown function (DUF4136) 44 193 1.3E-12 T 14-10-2018 IPR025411 Domain of unknown function DUF4136 AMBLS11_15910 cc0e4fdabcdd8289e16b0047aed425ae 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.6E-21 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM AMBLS11_02930 6cc1f7445d0ae69409cb819b3c37c2a5 213 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 25 206 7.1E-36 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AMBLS11_02930 6cc1f7445d0ae69409cb819b3c37c2a5 213 Gene3D G3DSA:2.60.120.590 11 212 2.9E-64 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily AMBLS11_02930 6cc1f7445d0ae69409cb819b3c37c2a5 213 SUPERFAMILY SSF51197 15 208 1.04E-63 T 14-10-2018 AMBLS11_15390 aa3bf1c4c3874689da0015ee5635f598 483 Pfam PF07012 Curlin associated repeat 177 211 1.3E-6 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AMBLS11_15390 aa3bf1c4c3874689da0015ee5635f598 483 Pfam PF07012 Curlin associated repeat 224 255 2.2E-4 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AMBLS11_15390 aa3bf1c4c3874689da0015ee5635f598 483 Pfam PF07012 Curlin associated repeat 292 323 4.3E-5 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 AMBLS11_03025 445816e62594a5850140db8a7dd5250b 196 Pfam PF13023 HD domain 15 178 4.7E-48 T 14-10-2018 IPR006674 HD domain AMBLS11_03025 445816e62594a5850140db8a7dd5250b 196 Gene3D G3DSA:1.10.3210.10 2 196 4.4E-51 T 14-10-2018 AMBLS11_03025 445816e62594a5850140db8a7dd5250b 196 SUPERFAMILY SSF109604 6 186 7.22E-41 T 14-10-2018 AMBLS11_00405 7b282c3feb8d706ce55b6b020db33645 858 Gene3D G3DSA:3.40.50.300 403 586 2.7E-35 T 14-10-2018 AMBLS11_00405 7b282c3feb8d706ce55b6b020db33645 858 Pfam PF04851 Type III restriction enzyme, res subunit 237 383 4.3E-24 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMBLS11_00405 7b282c3feb8d706ce55b6b020db33645 858 Gene3D G3DSA:3.40.50.300 221 398 8.2E-33 T 14-10-2018 AMBLS11_00405 7b282c3feb8d706ce55b6b020db33645 858 SMART SM00487 235 411 8.9E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_00405 7b282c3feb8d706ce55b6b020db33645 858 Pfam PF00271 Helicase conserved C-terminal domain 478 565 7.3E-5 T 14-10-2018 IPR001650 Helicase, C-terminal AMBLS11_00405 7b282c3feb8d706ce55b6b020db33645 858 SUPERFAMILY SSF52540 289 575 1.15E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_03475 e6a9ba053caca71e89775ead3e55ecb5 225 Pfam PF09335 SNARE associated Golgi protein 72 188 1.6E-17 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMBLS11_01905 7449197b6102ffdcfd747bd1cbfaee43 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 283 9.2E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_01905 7449197b6102ffdcfd747bd1cbfaee43 379 Gene3D G3DSA:2.40.50.100 75 221 1.6E-50 T 14-10-2018 AMBLS11_01905 7449197b6102ffdcfd747bd1cbfaee43 379 Gene3D G3DSA:2.40.30.170 63 290 1.6E-50 T 14-10-2018 AMBLS11_01905 7449197b6102ffdcfd747bd1cbfaee43 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 370 3.0E-55 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMBLS11_01905 7449197b6102ffdcfd747bd1cbfaee43 379 Gene3D G3DSA:1.10.287.470 109 177 1.6E-50 T 14-10-2018 AMBLS11_01905 7449197b6102ffdcfd747bd1cbfaee43 379 SUPERFAMILY SSF111369 66 261 4.84E-20 T 14-10-2018 AMBLS11_01905 7449197b6102ffdcfd747bd1cbfaee43 379 Gene3D G3DSA:2.40.420.20 291 368 1.6E-50 T 14-10-2018 AMBLS11_07530 6acdfd0f00dd625a48e1f6cd7ff6bfce 582 Pfam PF10972 Peptidoglycan-binding protein, CsiV 13 575 3.1E-53 T 14-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 3.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 3.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 3 254 5.1E-103 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 253 2.5E-53 T 14-10-2018 AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 SUPERFAMILY SSF51735 3 254 5.51E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 Gene3D G3DSA:3.40.50.720 1 255 1.3E-75 T 14-10-2018 AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_06625 c0fb8cb9714f211e469a9f3bd0fa004a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_04700 62d212f016ef4fab759612475ba8bcc4 109 SUPERFAMILY SSF101498 24 101 3.79E-15 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily AMBLS11_04700 62d212f016ef4fab759612475ba8bcc4 109 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 102 1.3E-19 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AMBLS11_04700 62d212f016ef4fab759612475ba8bcc4 109 Pfam PF04316 Anti-sigma-28 factor, FlgM 47 99 1.1E-15 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AMBLS11_18990 6de5c7db112dd2d3d3a0ea9a182749de 275 Gene3D G3DSA:3.40.50.300 47 237 1.2E-23 T 14-10-2018 AMBLS11_18990 6de5c7db112dd2d3d3a0ea9a182749de 275 Pfam PF01695 IstB-like ATP binding protein 106 226 3.3E-10 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AMBLS11_18990 6de5c7db112dd2d3d3a0ea9a182749de 275 SUPERFAMILY SSF52540 63 228 8.3E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_03630 be63bd8f7b918e649c156c9b7ffbf34d 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 256 3.5E-95 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMBLS11_03630 be63bd8f7b918e649c156c9b7ffbf34d 258 Pfam PF02405 Permease MlaE 41 253 9.2E-76 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 AMBLS11_09370 e504be94a556aba6eff9afe55bd64138 348 Gene3D G3DSA:2.130.10.10 22 284 4.7E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMBLS11_09370 e504be94a556aba6eff9afe55bd64138 348 SUPERFAMILY SSF50939 42 284 7.85E-29 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AMBLS11_09370 e504be94a556aba6eff9afe55bd64138 348 Pfam PF14870 Photosynthesis system II assembly factor YCF48 112 253 3.6E-7 T 14-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain AMBLS11_07860 a36a3402100244ac099714da5b3caba2 235 SUPERFAMILY SSF56784 16 233 5.25E-57 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_07860 a36a3402100244ac099714da5b3caba2 235 Gene3D G3DSA:1.10.150.240 38 104 2.6E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMBLS11_07860 a36a3402100244ac099714da5b3caba2 235 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 147 198 1.7E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_07860 a36a3402100244ac099714da5b3caba2 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 204 1.2E-35 T 14-10-2018 AMBLS11_07860 a36a3402100244ac099714da5b3caba2 235 Gene3D G3DSA:3.40.50.1000 26 225 2.6E-52 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_09625 2f84752d14267dca1d4e72de99f814ae 221 Pfam PF11726 Inovirus Gp2 32 213 1.1E-50 T 14-10-2018 AMBLS11_06055 8bf4ee2353799c50d0fb4549fa01d1bd 101 Pfam PF13466 STAS domain 21 95 2.4E-11 T 14-10-2018 IPR002645 STAS domain AMBLS11_06055 8bf4ee2353799c50d0fb4549fa01d1bd 101 SUPERFAMILY SSF52091 9 100 4.51E-20 T 14-10-2018 IPR036513 STAS domain superfamily AMBLS11_06055 8bf4ee2353799c50d0fb4549fa01d1bd 101 Gene3D G3DSA:3.30.750.24 1 101 7.7E-20 T 14-10-2018 IPR036513 STAS domain superfamily AMBLS11_14455 dfee17e034add79fc8764d945db3cf5f 353 Pfam PF12833 Helix-turn-helix domain 273 348 4.7E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_14455 dfee17e034add79fc8764d945db3cf5f 353 Gene3D G3DSA:1.10.10.60 245 351 6.4E-22 T 14-10-2018 AMBLS11_14455 dfee17e034add79fc8764d945db3cf5f 353 SMART SM00342 267 347 2.6E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMBLS11_14455 dfee17e034add79fc8764d945db3cf5f 353 SUPERFAMILY SSF46689 312 350 3.88E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMBLS11_14455 dfee17e034add79fc8764d945db3cf5f 353 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 48 207 1.2E-22 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AMBLS11_08460 c21804a0eeb19219058237d43893cfdd 371 Pfam PF01098 Cell cycle protein 23 367 1.8E-105 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_08460 c21804a0eeb19219058237d43893cfdd 371 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 366 1.4E-132 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_08460 c21804a0eeb19219058237d43893cfdd 371 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 369 27.779 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMBLS11_16305 566fbc40cd97b54edfaa00ccbc201083 229 SUPERFAMILY SSF53448 5 184 3.37E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07625 577f9955f8321aee5bdd5a941999fa5d 384 Gene3D G3DSA:1.20.1250.20 24 380 3.4E-10 T 14-10-2018 AMBLS11_07625 577f9955f8321aee5bdd5a941999fa5d 384 SUPERFAMILY SSF103473 26 378 1.83E-16 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_07595 ea87139b1fa7657a8107c6a9ed51df9e 281 Gene3D G3DSA:1.10.3210.10 1 269 6.0E-59 T 14-10-2018 AMBLS11_07595 ea87139b1fa7657a8107c6a9ed51df9e 281 Pfam PF08668 HDOD domain 15 205 1.7E-50 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMBLS11_07595 ea87139b1fa7657a8107c6a9ed51df9e 281 SUPERFAMILY SSF109604 3 259 7.07E-56 T 14-10-2018 AMBLS11_09775 dca3e268acf361f96995f308a6d7c280 102 Pfam PF04077 DsrH like protein 19 96 1.8E-5 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AMBLS11_09775 dca3e268acf361f96995f308a6d7c280 102 SUPERFAMILY SSF75169 12 98 2.15E-5 T 14-10-2018 IPR027396 DsrEFH-like AMBLS11_12940 ab28aec4af7cec7fac850d35090545ff 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 3.8E-5 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_12940 ab28aec4af7cec7fac850d35090545ff 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 150 4.9E-6 T 14-10-2018 IPR001451 Hexapeptide repeat AMBLS11_12940 ab28aec4af7cec7fac850d35090545ff 274 SUPERFAMILY SSF51161 3 168 6.1E-54 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMBLS11_12940 ab28aec4af7cec7fac850d35090545ff 274 Gene3D G3DSA:1.10.3130.10 1 66 7.2E-23 T 14-10-2018 AMBLS11_12940 ab28aec4af7cec7fac850d35090545ff 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMBLS11_12940 ab28aec4af7cec7fac850d35090545ff 274 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 166 5.5E-78 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMBLS11_12940 ab28aec4af7cec7fac850d35090545ff 274 Gene3D G3DSA:2.160.10.10 67 190 1.0E-34 T 14-10-2018 AMBLS11_15160 1db5cd40280a735cd5ddf10ea873340a 185 Pfam PF02659 Putative manganese efflux pump 32 179 1.3E-47 T 14-10-2018 IPR003810 Putative manganese efflux pump AMBLS11_15160 1db5cd40280a735cd5ddf10ea873340a 185 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 2 183 23.345 T 14-10-2018 IPR022929 Putative manganese efflux pump MntP AMBLS11_12095 52d10c4a6d7f0deaf01ea6dd190cf0d3 254 Gene3D G3DSA:1.25.40.10 36 253 4.3E-61 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12095 52d10c4a6d7f0deaf01ea6dd190cf0d3 254 Pfam PF13525 Outer membrane lipoprotein 35 239 3.0E-77 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like AMBLS11_12095 52d10c4a6d7f0deaf01ea6dd190cf0d3 254 SUPERFAMILY SSF48452 37 119 9.22E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_12095 52d10c4a6d7f0deaf01ea6dd190cf0d3 254 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 252 1.8E-89 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD AMBLS11_12095 52d10c4a6d7f0deaf01ea6dd190cf0d3 254 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 247 38.323 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD AMBLS11_17160 0c6a7b5b48337ae6eeb12635b2aac912 234 Gene3D G3DSA:3.60.21.10 41 164 1.8E-7 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMBLS11_17160 0c6a7b5b48337ae6eeb12635b2aac912 234 Pfam PF00149 Calcineurin-like phosphoesterase 43 150 9.0E-5 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMBLS11_17160 0c6a7b5b48337ae6eeb12635b2aac912 234 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 22 231 3.4E-61 T 14-10-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated AMBLS11_17160 0c6a7b5b48337ae6eeb12635b2aac912 234 SUPERFAMILY SSF56300 43 176 1.41E-10 T 14-10-2018 AMBLS11_17160 0c6a7b5b48337ae6eeb12635b2aac912 234 PIRSF PIRSF000887 22 233 4.8E-42 T 14-10-2018 IPR024173 Phosphoesterase, MJ0037 AMBLS11_04850 de4aae1379998265e7c47a993bb5f4bd 348 Gene3D G3DSA:3.40.50.150 91 285 3.6E-17 T 14-10-2018 AMBLS11_04850 de4aae1379998265e7c47a993bb5f4bd 348 Pfam PF13489 Methyltransferase domain 134 282 1.1E-14 T 14-10-2018 AMBLS11_04850 de4aae1379998265e7c47a993bb5f4bd 348 SUPERFAMILY SSF53335 138 298 9.21E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_00585 713fdb3b291466406254e75c628c3317 343 Gene3D G3DSA:3.40.50.300 1 214 2.9E-54 T 14-10-2018 AMBLS11_00585 713fdb3b291466406254e75c628c3317 343 Pfam PF08402 TOBE domain 269 331 5.6E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMBLS11_00585 713fdb3b291466406254e75c628c3317 343 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMBLS11_00585 713fdb3b291466406254e75c628c3317 343 SMART SM00382 26 203 3.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMBLS11_00585 713fdb3b291466406254e75c628c3317 343 Gene3D G3DSA:2.40.50.140 276 331 1.9E-8 T 14-10-2018 AMBLS11_00585 713fdb3b291466406254e75c628c3317 343 Gene3D G3DSA:2.40.50.940 215 275 1.9E-8 T 14-10-2018 AMBLS11_00585 713fdb3b291466406254e75c628c3317 343 Pfam PF00005 ABC transporter 18 154 2.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMBLS11_00585 713fdb3b291466406254e75c628c3317 343 SUPERFAMILY SSF50331 245 331 1.79E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMBLS11_00585 713fdb3b291466406254e75c628c3317 343 SUPERFAMILY SSF52540 1 233 4.51E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08000 1d618a4a7d2a5e9bf452173286915003 132 Pfam PF12514 Protein of unknown function (DUF3718) 34 101 4.8E-21 T 14-10-2018 IPR022193 Protein of unknown function DUF3718 AMBLS11_10395 5f10fcd9181ab8925bb3aad48fc1f269 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 1.1E-50 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 AMBLS11_10395 5f10fcd9181ab8925bb3aad48fc1f269 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.315 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 AMBLS11_04270 cd2b6ff5894c45bd63ce73efb138c16a 179 Gene3D G3DSA:3.90.950.20 9 177 3.8E-57 T 14-10-2018 IPR036653 CinA-like, C-terminal AMBLS11_04270 cd2b6ff5894c45bd63ce73efb138c16a 179 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 29 176 3.2E-48 T 14-10-2018 IPR008136 CinA, C-terminal AMBLS11_04270 cd2b6ff5894c45bd63ce73efb138c16a 179 Pfam PF02464 Competence-damaged protein 27 176 4.2E-55 T 14-10-2018 IPR008136 CinA, C-terminal AMBLS11_04270 cd2b6ff5894c45bd63ce73efb138c16a 179 SUPERFAMILY SSF142433 24 176 1.7E-52 T 14-10-2018 IPR036653 CinA-like, C-terminal AMBLS11_10830 bf6254b4bc0c2b83d462f596c5a7f730 77 Gene3D G3DSA:1.10.10.1130 1 77 9.6E-28 T 14-10-2018 AMBLS11_10830 bf6254b4bc0c2b83d462f596c5a7f730 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 4.2E-29 T 14-10-2018 IPR021250 Protein of unknown function DUF2789 AMBLS11_07805 1646b5a00e546cc54a156156e686e4b7 183 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 3 183 3.1E-57 T 14-10-2018 IPR018636 Protein of unknown function DUF2058 AMBLS11_15870 b3914e675ff7558e3f67a0f06ff25445 79 Pfam PF09905 DNA-binding protein VF530 5 67 1.8E-35 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AMBLS11_15870 b3914e675ff7558e3f67a0f06ff25445 79 Gene3D G3DSA:1.10.720.30 13 72 9.5E-31 T 14-10-2018 IPR036361 SAP domain superfamily AMBLS11_15455 6037eebb57d0204731653be6c4048973 237 Gene3D G3DSA:3.60.10.10 2 235 5.3E-43 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_15455 6037eebb57d0204731653be6c4048973 237 SUPERFAMILY SSF56219 3 230 3.27E-35 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_15455 6037eebb57d0204731653be6c4048973 237 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 223 7.8E-16 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMBLS11_09795 03e734642cc88a5c7644beed84a3963f 234 Pfam PF02586 SOS response associated peptidase (SRAP) 85 218 5.7E-9 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) AMBLS11_09795 03e734642cc88a5c7644beed84a3963f 234 SUPERFAMILY SSF143081 37 195 2.35E-18 T 14-10-2018 IPR036590 SOS response associated peptidase-like AMBLS11_09795 03e734642cc88a5c7644beed84a3963f 234 Gene3D G3DSA:3.90.1680.10 26 232 1.3E-10 T 14-10-2018 IPR036590 SOS response associated peptidase-like AMBLS11_05700 a343d1738823e97ba087021e182c14d2 230 PIRSF PIRSF006102 2 218 6.8E-77 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMBLS11_05700 a343d1738823e97ba087021e182c14d2 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.867 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AMBLS11_05700 a343d1738823e97ba087021e182c14d2 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 8.2E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AMBLS11_05700 a343d1738823e97ba087021e182c14d2 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 9 208 3.6E-84 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AMBLS11_11620 83fde4d6073293450eae3b7348628d80 279 Gene3D G3DSA:1.10.12.10 213 270 3.1E-20 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMBLS11_11620 83fde4d6073293450eae3b7348628d80 279 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 262 1.5E-45 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMBLS11_11620 83fde4d6073293450eae3b7348628d80 279 SUPERFAMILY SSF52096 1 268 4.5E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_11620 83fde4d6073293450eae3b7348628d80 279 Gene3D G3DSA:3.90.226.10 1 212 2.0E-63 T 14-10-2018 AMBLS11_11620 83fde4d6073293450eae3b7348628d80 279 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMBLS11_09605 47b95c596de44d169afd17d8783643a4 234 Pfam PF03942 DTW domain 28 210 1.7E-38 T 14-10-2018 IPR005636 DTW AMBLS11_09605 47b95c596de44d169afd17d8783643a4 234 SMART SM01144 25 217 2.6E-61 T 14-10-2018 IPR005636 DTW AMBLS11_10835 157cf442d2406ec80597a00165bf75ad 116 Pfam PF11042 Protein of unknown function (DUF2750) 18 115 6.6E-30 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 AMBLS11_02675 3cfd4f302658ba5c99d0319d0a45a082 571 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 13 521 6.9E-103 T 14-10-2018 IPR019934 Conserved hypothetical protein CHP03545 AMBLS11_04855 029a12e72ce4b9b1a1d25308ea17cb3c 361 Gene3D G3DSA:3.40.50.720 134 277 1.6E-11 T 14-10-2018 AMBLS11_04855 029a12e72ce4b9b1a1d25308ea17cb3c 361 SUPERFAMILY SSF51735 149 274 1.36E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_08130 eaf714ba1cfa660df73dddd9760a62ae 859 Gene3D G3DSA:3.60.10.10 463 817 2.5E-25 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_08130 eaf714ba1cfa660df73dddd9760a62ae 859 SUPERFAMILY SSF56219 453 823 1.58E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMBLS11_18100 d770cd9ef24ffa68451440e481979c70 87 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 77 5.3E-34 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 AMBLS11_18100 d770cd9ef24ffa68451440e481979c70 87 Pfam PF10985 Protein of unknown function (DUF2805) 9 79 2.8E-34 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 AMBLS11_12135 0cb27a0dfd9b2d5f04163f9e3d594793 418 PIRSF PIRSF003085 19 417 6.4E-121 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AMBLS11_12135 0cb27a0dfd9b2d5f04163f9e3d594793 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 133 403 5.9E-85 T 14-10-2018 AMBLS11_12135 0cb27a0dfd9b2d5f04163f9e3d594793 418 SUPERFAMILY SSF53335 22 361 6.52E-90 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_12135 0cb27a0dfd9b2d5f04163f9e3d594793 418 Gene3D G3DSA:3.40.50.150 140 412 2.9E-99 T 14-10-2018 AMBLS11_05215 85e3a4a88a99c2767b91e0aeddc774c2 343 SUPERFAMILY SSF161098 94 321 2.45E-22 T 14-10-2018 IPR035906 MetI-like superfamily AMBLS11_05215 85e3a4a88a99c2767b91e0aeddc774c2 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 335 1.1E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMBLS11_00365 f4a87c20c765d26a4bc0e393a569157b 644 SUPERFAMILY SSF52540 258 477 6.55E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_00200 ca022d76abb7d9006cb1ae63defcd6af 583 Pfam PF05960 Bacterial protein of unknown function (DUF885) 43 573 2.5E-166 T 14-10-2018 IPR010281 Protein of unknown function DUF885 AMBLS11_10745 ae50aa0b5bb24274346199d88e887da2 324 Pfam PF08908 Domain of unknown function (DUF1852) 2 321 1.1E-173 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 AMBLS11_10745 ae50aa0b5bb24274346199d88e887da2 324 PIRSF PIRSF034367 1 324 4.5E-182 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 AMBLS11_11170 9562c686a4489040cabf01948c35da52 323 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 267 280 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMBLS11_11170 9562c686a4489040cabf01948c35da52 323 SUPERFAMILY SSF53613 9 312 6.7E-62 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_11170 9562c686a4489040cabf01948c35da52 323 Pfam PF00294 pfkB family carbohydrate kinase 8 313 2.5E-48 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMBLS11_11170 9562c686a4489040cabf01948c35da52 323 Gene3D G3DSA:3.40.1190.20 5 319 1.2E-66 T 14-10-2018 IPR029056 Ribokinase-like AMBLS11_10885 79f1d1bb5a2f8847d66b241c2006d62a 74 SUPERFAMILY SSF47384 10 64 2.94E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMBLS11_14560 6cd8381d34eef8f6742221b0bf4ab178 291 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 1 288 49.718 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AMBLS11_14560 6cd8381d34eef8f6742221b0bf4ab178 291 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AMBLS11_14560 6cd8381d34eef8f6742221b0bf4ab178 291 Pfam PF13714 Phosphoenolpyruvate phosphomutase 8 251 3.2E-52 T 14-10-2018 AMBLS11_14560 6cd8381d34eef8f6742221b0bf4ab178 291 SUPERFAMILY SSF51621 4 286 2.78E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMBLS11_14560 6cd8381d34eef8f6742221b0bf4ab178 291 Gene3D G3DSA:3.20.20.60 1 291 7.0E-107 T 14-10-2018 AMBLS11_14560 6cd8381d34eef8f6742221b0bf4ab178 291 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 4 287 1.0E-129 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AMBLS11_05815 cba2885238440f3a8ac3096dc41e583a 234 Pfam PF11859 Protein of unknown function (DUF3379) 1 230 3.0E-82 T 14-10-2018 IPR021806 Protein of unknown function DUF3379 AMBLS11_07065 5cd92c4ba4ef5d9213cc210e6fa0b83f 121 SUPERFAMILY SSF54593 5 117 2.95E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_07065 5cd92c4ba4ef5d9213cc210e6fa0b83f 121 Gene3D G3DSA:3.10.180.10 2 120 3.1E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_14275 4f2cddcdf77552ceedcdee1674b8f814 115 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 107 1.2E-10 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AMBLS11_01980 476cb5948ff6b42bdb6213cfc9c05743 273 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 32 265 2.8E-44 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AMBLS11_01980 476cb5948ff6b42bdb6213cfc9c05743 273 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 61 243 5.7E-25 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AMBLS11_00055 2121f882abad5eaeaabfede62aae5af2 233 Pfam PF13489 Methyltransferase domain 98 220 1.2E-14 T 14-10-2018 AMBLS11_00055 2121f882abad5eaeaabfede62aae5af2 233 SUPERFAMILY SSF53335 74 221 1.42E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_00055 2121f882abad5eaeaabfede62aae5af2 233 Gene3D G3DSA:3.40.50.150 97 224 9.7E-11 T 14-10-2018 AMBLS11_15645 cae00383d2c31886ae731b22a3417a6b 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 275 4.8E-122 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AMBLS11_15645 cae00383d2c31886ae731b22a3417a6b 280 Gene3D G3DSA:3.40.50.1820 1 280 3.7E-95 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_15645 cae00383d2c31886ae731b22a3417a6b 280 SUPERFAMILY SSF53474 1 277 1.07E-89 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_15645 cae00383d2c31886ae731b22a3417a6b 280 Pfam PF00756 Putative esterase 22 271 4.8E-61 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMBLS11_11075 6b6ab52e9404079286c4f3c1e7274dfc 199 SMART SM00749 131 194 2.5E-10 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AMBLS11_11075 6b6ab52e9404079286c4f3c1e7274dfc 199 SMART SM00749 39 102 0.073 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AMBLS11_11075 6b6ab52e9404079286c4f3c1e7274dfc 199 Pfam PF04972 BON domain 126 193 4.7E-21 T 14-10-2018 IPR007055 BON domain AMBLS11_11075 6b6ab52e9404079286c4f3c1e7274dfc 199 Pfam PF04972 BON domain 35 101 2.5E-17 T 14-10-2018 IPR007055 BON domain AMBLS11_10695 068507171aa8e21b7309487852bcbde2 372 SUPERFAMILY SSF53187 14 362 6.62E-38 T 14-10-2018 AMBLS11_10695 068507171aa8e21b7309487852bcbde2 372 Gene3D G3DSA:2.40.50.100 294 364 7.4E-131 T 14-10-2018 AMBLS11_10695 068507171aa8e21b7309487852bcbde2 372 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 33 366 9.3E-52 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AMBLS11_10695 068507171aa8e21b7309487852bcbde2 372 Gene3D G3DSA:3.40.630.10 14 293 7.4E-131 T 14-10-2018 AMBLS11_10735 bec35271551d98cc3dece0768aa7053d 87 Pfam PF07498 Rho termination factor, N-terminal domain 58 84 7.4E-8 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMBLS11_10735 bec35271551d98cc3dece0768aa7053d 87 SUPERFAMILY SSF68912 52 84 3.61E-5 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AMBLS11_01620 403dd9d99e43ec4c3f9ee93952a264eb 172 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 166 2.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_01620 403dd9d99e43ec4c3f9ee93952a264eb 172 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 14 172 1.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMBLS11_01620 403dd9d99e43ec4c3f9ee93952a264eb 172 Gene3D G3DSA:1.10.260.80 24 75 6.2E-50 T 14-10-2018 AMBLS11_01620 403dd9d99e43ec4c3f9ee93952a264eb 172 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 171 8.7E-19 T 14-10-2018 AMBLS11_01620 403dd9d99e43ec4c3f9ee93952a264eb 172 Gene3D G3DSA:3.40.50.1000 12 171 6.2E-50 T 14-10-2018 IPR023214 HAD superfamily AMBLS11_01620 403dd9d99e43ec4c3f9ee93952a264eb 172 SUPERFAMILY SSF56784 11 172 2.04E-29 T 14-10-2018 IPR036412 HAD-like superfamily AMBLS11_18860 f9832c839d53cc9e6dac83a104cbbfa3 976 Pfam PF07715 TonB-dependent Receptor Plug Domain 32 139 6.2E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_18860 f9832c839d53cc9e6dac83a104cbbfa3 976 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 15 976 4.9E-194 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor AMBLS11_18860 f9832c839d53cc9e6dac83a104cbbfa3 976 SUPERFAMILY SSF56935 4 976 1.21E-89 T 14-10-2018 AMBLS11_18860 f9832c839d53cc9e6dac83a104cbbfa3 976 Gene3D G3DSA:2.170.130.10 4 149 1.5E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_18860 f9832c839d53cc9e6dac83a104cbbfa3 976 Pfam PF00593 TonB dependent receptor 423 975 5.3E-34 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_03905 223ab77623696291e0fa2591ce4b8cc5 171 SUPERFAMILY SSF52799 19 146 1.55E-11 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMBLS11_03905 223ab77623696291e0fa2591ce4b8cc5 171 Gene3D G3DSA:3.90.190.10 10 158 5.7E-11 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMBLS11_09520 083ea89b08be7165232861a1eb167082 53 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 3 45 5.7E-14 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component AMBLS11_16385 3999b43e24a360d18ced918f6659b0d3 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.08 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16385 3999b43e24a360d18ced918f6659b0d3 117 SUPERFAMILY SSF53137 3 115 8.94E-53 T 14-10-2018 AMBLS11_16385 3999b43e24a360d18ced918f6659b0d3 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.1E-42 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMBLS11_16385 3999b43e24a360d18ced918f6659b0d3 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 3.8E-43 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMBLS11_16385 3999b43e24a360d18ced918f6659b0d3 117 Gene3D G3DSA:3.30.420.100 1 117 6.9E-45 T 14-10-2018 AMBLS11_02000 af4439f6cb2dca561fb079f97468b19b 492 Gene3D G3DSA:3.30.70.1070 391 488 1.2E-15 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMBLS11_12410 0435cfd0d592bd9829dcb33c11ff1635 1206 Pfam PF04233 Phage Mu protein F like protein 59 188 1.9E-22 T 14-10-2018 IPR006528 Phage head morphogenesis domain AMBLS11_12410 0435cfd0d592bd9829dcb33c11ff1635 1206 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 107 189 1.1E-10 T 14-10-2018 IPR006528 Phage head morphogenesis domain AMBLS11_10335 47da5ac4d700e334b3b8e389355708a7 254 Gene3D G3DSA:3.90.226.10 2 196 9.7E-59 T 14-10-2018 AMBLS11_10335 47da5ac4d700e334b3b8e389355708a7 254 Gene3D G3DSA:1.10.12.10 197 251 2.1E-5 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMBLS11_10335 47da5ac4d700e334b3b8e389355708a7 254 SUPERFAMILY SSF52096 2 247 1.46E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_10335 47da5ac4d700e334b3b8e389355708a7 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 248 6.4E-46 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMBLS11_11000 4bb64e66b62eb98dc7afffb7d8737a64 732 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 135 721 2.2E-183 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMBLS11_11000 4bb64e66b62eb98dc7afffb7d8737a64 732 Pfam PF02446 4-alpha-glucanotransferase 184 703 1.5E-121 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMBLS11_11000 4bb64e66b62eb98dc7afffb7d8737a64 732 SUPERFAMILY SSF51445 178 718 1.37E-141 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMBLS11_11000 4bb64e66b62eb98dc7afffb7d8737a64 732 Gene3D G3DSA:3.20.20.80 177 722 1.7E-114 T 14-10-2018 AMBLS11_09395 908d7fbaa0657a93f8bd6fbc170fa32d 77 Gene3D G3DSA:3.40.30.10 1 77 5.5E-17 T 14-10-2018 AMBLS11_09395 908d7fbaa0657a93f8bd6fbc170fa32d 77 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 77 4.3E-13 T 14-10-2018 IPR008554 Glutaredoxin-like AMBLS11_09395 908d7fbaa0657a93f8bd6fbc170fa32d 77 SUPERFAMILY SSF52833 1 77 2.66E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_08040 6c312f1c354b78e5d72e4e31aa2e25e7 54 Pfam PF08085 Entericidin EcnA/B family 30 49 2.2E-9 T 14-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AMBLS11_02440 832bf8ef12000cd538633a9b5c1e5ca1 356 Gene3D G3DSA:2.30.30.60 124 172 3.4E-8 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMBLS11_02440 832bf8ef12000cd538633a9b5c1e5ca1 356 SUPERFAMILY SSF50182 109 171 1.31E-11 T 14-10-2018 IPR010920 LSM domain superfamily AMBLS11_02440 832bf8ef12000cd538633a9b5c1e5ca1 356 Pfam PF00924 Mechanosensitive ion channel 66 259 5.0E-19 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMBLS11_02440 832bf8ef12000cd538633a9b5c1e5ca1 356 SUPERFAMILY SSF82689 180 263 1.07E-6 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMBLS11_12575 0484ced4e484adf543a5a1d99576c194 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 81 1.5E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMBLS11_12575 0484ced4e484adf543a5a1d99576c194 161 Gene3D G3DSA:3.10.50.40 3 153 5.9E-53 T 14-10-2018 AMBLS11_12575 0484ced4e484adf543a5a1d99576c194 161 Gene3D G3DSA:2.40.10.330 71 120 5.9E-53 T 14-10-2018 AMBLS11_12575 0484ced4e484adf543a5a1d99576c194 161 SUPERFAMILY SSF54534 3 139 2.95E-35 T 14-10-2018 AMBLS11_15580 c1cb5e41a6e72d25f43a0f6a8ff7168e 251 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 4 251 8.9E-84 T 14-10-2018 IPR026387 Outer membrane protein AMBLS11_03785 a1aded433ba7aae8124ecd23e9ee29d3 299 SUPERFAMILY SSF51569 7 297 1.99E-94 T 14-10-2018 AMBLS11_03785 a1aded433ba7aae8124ecd23e9ee29d3 299 Gene3D G3DSA:3.20.20.70 2 299 5.0E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_03785 a1aded433ba7aae8124ecd23e9ee29d3 299 Pfam PF00274 Fructose-bisphosphate aldolase class-I 20 204 3.2E-9 T 14-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMBLS11_15265 85a8aa35a17cf47fee369d294da0d656 595 Gene3D G3DSA:3.30.830.10 5 203 1.1E-22 T 14-10-2018 AMBLS11_15265 85a8aa35a17cf47fee369d294da0d656 595 SUPERFAMILY SSF63411 17 183 6.25E-15 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMBLS11_15265 85a8aa35a17cf47fee369d294da0d656 595 Pfam PF00675 Insulinase (Peptidase family M16) 30 127 4.5E-8 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMBLS11_12245 ecc290b32db680cef3e7555cb305671a 287 Gene3D G3DSA:3.20.20.140 1 275 1.6E-66 T 14-10-2018 AMBLS11_12245 ecc290b32db680cef3e7555cb305671a 287 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 1 9 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMBLS11_12245 ecc290b32db680cef3e7555cb305671a 287 PIRSF PIRSF005902 1 277 1.4E-58 T 14-10-2018 IPR001130 TatD family GO:0016788 AMBLS11_12245 ecc290b32db680cef3e7555cb305671a 287 SUPERFAMILY SSF51556 1 275 1.11E-62 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_12245 ecc290b32db680cef3e7555cb305671a 287 Pfam PF01026 TatD related DNase 2 273 1.2E-54 T 14-10-2018 IPR001130 TatD family GO:0016788 AMBLS11_03020 9d6d3a3fcf575340634147895d8cdb1b 406 Pfam PF13372 Alginate export 61 260 2.9E-12 T 14-10-2018 IPR025388 Alginate export domain AMBLS11_14235 7f7818ff9a966ad0ec222a7070e3bc5a 157 Pfam PF14467 Domain of unknown function (DUF4426) 39 156 4.3E-45 T 14-10-2018 IPR025218 Domain of unknown function DUF4426 AMBLS11_14235 7f7818ff9a966ad0ec222a7070e3bc5a 157 Gene3D G3DSA:2.60.40.3340 30 157 4.7E-40 T 14-10-2018 AMBLS11_06110 1a0fe7f28cb1e2a4040274b56cf4e095 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 9.4E-18 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AMBLS11_06110 1a0fe7f28cb1e2a4040274b56cf4e095 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 98 119 9.4E-18 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AMBLS11_06110 1a0fe7f28cb1e2a4040274b56cf4e095 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 125 138 9.4E-18 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AMBLS11_06110 1a0fe7f28cb1e2a4040274b56cf4e095 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 70 89 9.4E-18 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AMBLS11_06110 1a0fe7f28cb1e2a4040274b56cf4e095 146 SUPERFAMILY SSF55811 3 141 2.71E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMBLS11_06110 1a0fe7f28cb1e2a4040274b56cf4e095 146 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMBLS11_06110 1a0fe7f28cb1e2a4040274b56cf4e095 146 Pfam PF00293 NUDIX domain 5 137 1.9E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMBLS11_06110 1a0fe7f28cb1e2a4040274b56cf4e095 146 Gene3D G3DSA:3.90.79.10 1 144 2.2E-36 T 14-10-2018 AMBLS11_09450 891f9127515df5818bee5dc719d61718 430 Pfam PF10011 Predicted membrane protein (DUF2254) 19 379 6.4E-90 T 14-10-2018 IPR018723 Protein of unknown function DUF2254, membrane AMBLS11_13475 cc6afddc6b5eac71454b9237c86e871a 222 Pfam PF07308 Protein of unknown function (DUF1456) 88 154 3.6E-23 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 AMBLS11_13475 cc6afddc6b5eac71454b9237c86e871a 222 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 4.0E-21 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 AMBLS11_04905 af45b7eb467a62e7c7645a303df8709f 302 Gene3D G3DSA:3.40.50.720 1 95 2.1E-7 T 14-10-2018 AMBLS11_04905 af45b7eb467a62e7c7645a303df8709f 302 Pfam PF04991 LicD family 119 177 7.7E-18 T 14-10-2018 IPR007074 LicD family AMBLS11_16795 877300bf0461c4c3dd2b703c65d5cc9d 192 Pfam PF04222 Protein of unknown function (DUF416) 8 191 2.5E-60 T 14-10-2018 IPR007338 Protein of unknown function DUF416 AMBLS11_16795 877300bf0461c4c3dd2b703c65d5cc9d 192 Gene3D G3DSA:1.20.1590.10 2 192 1.1E-65 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily AMBLS11_13940 25ec66f6283622f643ba98ddeed4f13d 300 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 299 6.5E-29 T 14-10-2018 IPR031347 Protein AmpE AMBLS11_03070 1fb538bb5cecf586c02a7a278aeb88e3 291 Gene3D G3DSA:3.20.20.140 6 291 1.7E-53 T 14-10-2018 AMBLS11_03070 1fb538bb5cecf586c02a7a278aeb88e3 291 Pfam PF04909 Amidohydrolase 159 290 4.5E-18 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMBLS11_03070 1fb538bb5cecf586c02a7a278aeb88e3 291 SUPERFAMILY SSF51556 8 290 2.42E-33 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMBLS11_08815 3c9b279ce55cae61e48ddafab5d31cad 343 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 26 319 6.9E-76 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AMBLS11_08815 3c9b279ce55cae61e48ddafab5d31cad 343 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 331 35.878 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AMBLS11_08815 3c9b279ce55cae61e48ddafab5d31cad 343 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 328 3.9E-97 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AMBLS11_08815 3c9b279ce55cae61e48ddafab5d31cad 343 SUPERFAMILY SSF52540 55 167 5.1E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_02700 8bcf7f70334af0371d347b8c34877e2a 359 Gene3D G3DSA:1.10.10.60 261 359 4.0E-7 T 14-10-2018 AMBLS11_18350 31ac0fa27f5f6769af9651679deba4a0 167 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 9 115 3.2E-17 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 AMBLS11_18350 31ac0fa27f5f6769af9651679deba4a0 167 Pfam PF09523 Protein of unknown function (DUF2390) 11 112 2.2E-21 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 AMBLS11_05420 735b145d6e556865445a1c87aa7dff07 343 Pfam PF13515 Fusaric acid resistance protein-like 192 323 1.2E-5 T 14-10-2018 AMBLS11_05420 735b145d6e556865445a1c87aa7dff07 343 PIRSF PIRSF029594 5 342 6.6E-108 T 14-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 AMBLS11_05420 735b145d6e556865445a1c87aa7dff07 343 Pfam PF11168 Protein of unknown function (DUF2955) 12 151 1.1E-35 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 AMBLS11_08485 0a9adedc4feb3b258256a84de334a877 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 327 1.4E-76 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AMBLS11_08485 0a9adedc4feb3b258256a84de334a877 342 SUPERFAMILY SSF52540 1 209 1.91E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_08485 0a9adedc4feb3b258256a84de334a877 342 Gene3D G3DSA:3.40.50.300 1 139 1.4E-46 T 14-10-2018 AMBLS11_08485 0a9adedc4feb3b258256a84de334a877 342 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 1.4E-13 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMBLS11_08485 0a9adedc4feb3b258256a84de334a877 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 1.5E-27 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AMBLS11_08485 0a9adedc4feb3b258256a84de334a877 342 Gene3D G3DSA:1.10.8.60 142 211 5.4E-22 T 14-10-2018 AMBLS11_08485 0a9adedc4feb3b258256a84de334a877 342 Gene3D G3DSA:1.20.272.10 213 339 2.0E-30 T 14-10-2018 AMBLS11_08485 0a9adedc4feb3b258256a84de334a877 342 SUPERFAMILY SSF48019 211 332 2.55E-26 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMBLS11_18175 6659a72efe95edfc6f98e25c8306434f 311 Gene3D G3DSA:1.10.287.70 26 253 1.1E-58 T 14-10-2018 AMBLS11_18175 6659a72efe95edfc6f98e25c8306434f 311 PRINTS PR00169 Potassium channel signature 20 48 7.1E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMBLS11_18175 6659a72efe95edfc6f98e25c8306434f 311 PRINTS PR00169 Potassium channel signature 163 186 7.1E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMBLS11_18175 6659a72efe95edfc6f98e25c8306434f 311 PRINTS PR00169 Potassium channel signature 194 216 7.1E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMBLS11_18175 6659a72efe95edfc6f98e25c8306434f 311 PRINTS PR00169 Potassium channel signature 134 160 7.1E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMBLS11_18175 6659a72efe95edfc6f98e25c8306434f 311 PRINTS PR00169 Potassium channel signature 62 85 7.1E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMBLS11_18175 6659a72efe95edfc6f98e25c8306434f 311 PRINTS PR00169 Potassium channel signature 223 249 7.1E-37 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMBLS11_18175 6659a72efe95edfc6f98e25c8306434f 311 Pfam PF00520 Ion transport protein 27 254 8.6E-33 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AMBLS11_18175 6659a72efe95edfc6f98e25c8306434f 311 SUPERFAMILY SSF81324 21 249 1.31E-50 T 14-10-2018 AMBLS11_03330 64250ccd55b796bbc2d24fc7b6bc7c13 149 Pfam PF02643 Uncharacterized ACR, COG1430 46 148 5.6E-32 T 14-10-2018 IPR003795 Protein of unknown function DUF192 AMBLS11_03330 64250ccd55b796bbc2d24fc7b6bc7c13 149 Gene3D G3DSA:2.60.120.1140 27 149 2.9E-39 T 14-10-2018 IPR038695 Saro_0823-like superfamily AMBLS11_17600 670bcd4ba172099487deca7dbe6f39a5 308 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 11 305 32.182 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AMBLS11_17600 670bcd4ba172099487deca7dbe6f39a5 308 Pfam PF02649 Type I GTP cyclohydrolase folE2 11 300 8.2E-69 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AMBLS11_04290 eec75a6610e2fcb6ad87d1ea676442ec 398 Pfam PF12698 ABC-2 family transporter protein 16 387 4.2E-29 T 14-10-2018 AMBLS11_14250 632528480945148b5bcb6e506d975465 111 Gene3D G3DSA:3.10.180.10 6 110 2.1E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_14250 632528480945148b5bcb6e506d975465 111 SUPERFAMILY SSF54593 5 110 2.48E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMBLS11_06405 636fbc81e2a7a6b03bdab62fb1274e30 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 69 3.0E-21 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AMBLS11_06405 636fbc81e2a7a6b03bdab62fb1274e30 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 67 2.6E-29 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AMBLS11_00545 67c468affcedbe649a3948ead17eaf42 128 Pfam PF01042 Endoribonuclease L-PSP 9 124 2.5E-41 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMBLS11_00545 67c468affcedbe649a3948ead17eaf42 128 Gene3D G3DSA:3.30.1330.40 1 126 6.5E-49 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMBLS11_00545 67c468affcedbe649a3948ead17eaf42 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 9.5E-51 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AMBLS11_00545 67c468affcedbe649a3948ead17eaf42 128 SUPERFAMILY SSF55298 1 127 5.97E-45 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMBLS11_04875 4df68848f4a3e6d857af09418da17d46 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 229 2.3E-69 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMBLS11_04875 4df68848f4a3e6d857af09418da17d46 319 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 45.76 T 14-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 AMBLS11_04875 4df68848f4a3e6d857af09418da17d46 319 SUPERFAMILY SSF51735 3 316 9.46E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_04875 4df68848f4a3e6d857af09418da17d46 319 Gene3D G3DSA:3.40.50.720 6 303 3.0E-103 T 14-10-2018 AMBLS11_04875 4df68848f4a3e6d857af09418da17d46 319 Gene3D G3DSA:3.90.25.10 168 312 3.0E-103 T 14-10-2018 AMBLS11_05770 f13c21a57899593ad509d2a63e9c0d7e 315 Pfam PF11227 Protein of unknown function (DUF3025) 62 302 2.2E-65 T 14-10-2018 IPR021390 Protein of unknown function DUF3025 AMBLS11_13495 44c8c8e259d9951af6ced588ca5ef2e2 178 Pfam PF03929 PepSY-associated TM region 11 169 3.8E-15 T 14-10-2018 IPR005625 PepSY-associated TM protein AMBLS11_15685 6a4ef6b3ca5611f048e2b7d481b0d326 241 Pfam PF00106 short chain dehydrogenase 4 199 4.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_15685 6a4ef6b3ca5611f048e2b7d481b0d326 241 Gene3D G3DSA:3.40.50.720 1 241 2.7E-38 T 14-10-2018 AMBLS11_15685 6a4ef6b3ca5611f048e2b7d481b0d326 241 SUPERFAMILY SSF51735 3 241 2.28E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_15685 6a4ef6b3ca5611f048e2b7d481b0d326 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_15685 6a4ef6b3ca5611f048e2b7d481b0d326 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_15685 6a4ef6b3ca5611f048e2b7d481b0d326 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_15685 6a4ef6b3ca5611f048e2b7d481b0d326 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMBLS11_11930 f8fa6732bf334c0a0deab3c109f48df0 278 Pfam PF14491 Protein of unknown function (DUF4435) 21 236 1.0E-20 T 14-10-2018 IPR029492 Domain of unknown function DUF4435 AMBLS11_14390 d0d4846bb3af70c11b9b88ae1c9a65ae 346 PIRSF PIRSF005508 1 346 4.9E-126 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AMBLS11_14390 d0d4846bb3af70c11b9b88ae1c9a65ae 346 Gene3D G3DSA:1.20.1530.20 2 340 3.6E-30 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMBLS11_14390 d0d4846bb3af70c11b9b88ae1c9a65ae 346 Pfam PF01758 Sodium Bile acid symporter family 47 250 2.2E-44 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AMBLS11_14390 d0d4846bb3af70c11b9b88ae1c9a65ae 346 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 338 8.0E-126 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AMBLS11_00565 29f4179eec41a18a58474a4ed684b6aa 157 SUPERFAMILY SSF52833 1 157 2.31E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_00565 29f4179eec41a18a58474a4ed684b6aa 157 Pfam PF08534 Redoxin 3 154 2.3E-33 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMBLS11_00565 29f4179eec41a18a58474a4ed684b6aa 157 Gene3D G3DSA:3.40.30.10 2 157 6.9E-57 T 14-10-2018 AMBLS11_06615 859fafffe2228303e270f6383312f6e4 785 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 98 783 4.1E-263 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase AMBLS11_17625 cd986dea23346f4a5a09cba8dc504bff 867 SUPERFAMILY SSF82866 646 865 6.93E-32 T 14-10-2018 AMBLS11_17625 cd986dea23346f4a5a09cba8dc504bff 867 Gene3D G3DSA:1.20.1640.10 694 866 1.2E-10 T 14-10-2018 AMBLS11_17625 cd986dea23346f4a5a09cba8dc504bff 867 Gene3D G3DSA:1.20.1640.10 193 398 2.3E-14 T 14-10-2018 AMBLS11_17625 cd986dea23346f4a5a09cba8dc504bff 867 Pfam PF03176 MMPL family 146 391 3.2E-14 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMBLS11_17625 cd986dea23346f4a5a09cba8dc504bff 867 Pfam PF03176 MMPL family 642 863 7.0E-19 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMBLS11_17625 cd986dea23346f4a5a09cba8dc504bff 867 SUPERFAMILY SSF82866 177 387 3.14E-28 T 14-10-2018 AMBLS11_06190 b11bf9ae6c9957e78c83d1f08d8da97d 396 Pfam PF07396 Phosphate-selective porin O and P 75 377 2.2E-11 T 14-10-2018 IPR010870 Phosphate-selective porin O/P AMBLS11_06190 b11bf9ae6c9957e78c83d1f08d8da97d 396 Gene3D G3DSA:2.40.160.10 10 393 9.8E-29 T 14-10-2018 IPR023614 Porin domain superfamily AMBLS11_16160 29a7cb317e6a74b684f32d76ba7f3db8 450 SUPERFAMILY SSF63829 181 432 1.03E-11 T 14-10-2018 AMBLS11_16160 29a7cb317e6a74b684f32d76ba7f3db8 450 Pfam PF05787 Bacterial protein of unknown function (DUF839) 145 437 2.3E-57 T 14-10-2018 IPR008557 Protein of unknown function DUF839 AMBLS11_16160 29a7cb317e6a74b684f32d76ba7f3db8 450 Pfam PF05787 Bacterial protein of unknown function (DUF839) 36 137 3.4E-12 T 14-10-2018 IPR008557 Protein of unknown function DUF839 AMBLS11_08200 f6947c7eca3cf1a10d103334f0123ded 229 SUPERFAMILY SSF55073 25 105 1.35E-5 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_08200 f6947c7eca3cf1a10d103334f0123ded 229 Gene3D G3DSA:3.30.70.1230 3 122 2.7E-6 T 14-10-2018 IPR029787 Nucleotide cyclase AMBLS11_16920 e4d0cd5a248f4ad2ef7bf188f6448865 199 Pfam PF16357 Putative PepSY_TM-like 7 199 5.6E-71 T 14-10-2018 IPR032307 Putative PepSY TM-like protein AMBLS11_03930 8a8c15fff11ff361a15773b20b3cfdb5 178 SUPERFAMILY SSF52833 9 176 3.05E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_03930 8a8c15fff11ff361a15773b20b3cfdb5 178 Gene3D G3DSA:3.40.30.10 1 162 1.8E-19 T 14-10-2018 AMBLS11_03930 8a8c15fff11ff361a15773b20b3cfdb5 178 Pfam PF08534 Redoxin 10 143 1.7E-16 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMBLS11_15940 407539e0a0a391e2a9c2092d9ed27ace 400 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 395 7.4E-174 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AMBLS11_15940 407539e0a0a391e2a9c2092d9ed27ace 400 PIRSF PIRSF016055 1 400 2.9E-193 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AMBLS11_15940 407539e0a0a391e2a9c2092d9ed27ace 400 Pfam PF03116 NQR2, RnfD, RnfE family 42 392 3.9E-106 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AMBLS11_15940 407539e0a0a391e2a9c2092d9ed27ace 400 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 399 35.684 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AMBLS11_05755 1ad99d1803f28c1636c38e01668546bd 297 Gene3D G3DSA:3.40.190.10 49 249 8.1E-6 T 14-10-2018 AMBLS11_05755 1ad99d1803f28c1636c38e01668546bd 297 SUPERFAMILY SSF53850 47 251 4.95E-13 T 14-10-2018 AMBLS11_05755 1ad99d1803f28c1636c38e01668546bd 297 Gene3D G3DSA:3.40.190.10 115 214 8.1E-6 T 14-10-2018 AMBLS11_14965 d91b4ee8f891c0eb76cafb84c7551d08 356 Gene3D G3DSA:1.25.40.10 99 226 2.4E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMBLS11_05415 0b85bd4d00ff00349b58f783307799a7 311 Gene3D G3DSA:3.40.50.720 122 246 3.1E-106 T 14-10-2018 AMBLS11_05415 0b85bd4d00ff00349b58f783307799a7 311 Gene3D G3DSA:3.90.180.10 6 292 3.1E-106 T 14-10-2018 AMBLS11_05415 0b85bd4d00ff00349b58f783307799a7 311 SUPERFAMILY SSF51735 114 257 2.63E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMBLS11_05415 0b85bd4d00ff00349b58f783307799a7 311 SMART SM00829 12 308 9.1E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMBLS11_05415 0b85bd4d00ff00349b58f783307799a7 311 SUPERFAMILY SSF50129 6 148 1.16E-30 T 14-10-2018 IPR011032 GroES-like superfamily AMBLS11_05415 0b85bd4d00ff00349b58f783307799a7 311 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 2.3E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMBLS11_07725 8a8f5b125ba42e8c4c35498a9a9d3664 448 Pfam PF03553 Na+/H+ antiporter family 246 432 5.7E-10 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AMBLS11_07725 8a8f5b125ba42e8c4c35498a9a9d3664 448 Pfam PF03553 Na+/H+ antiporter family 23 221 2.1E-13 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AMBLS11_08630 fcc239d6a68c9d9db753f09b0ccba385 184 Gene3D G3DSA:3.30.40.60 63 158 9.0E-25 T 14-10-2018 AMBLS11_08630 fcc239d6a68c9d9db753f09b0ccba385 184 Pfam PF14279 HNH endonuclease 88 142 6.0E-21 T 14-10-2018 IPR029471 HNH endonuclease 5 AMBLS11_08630 fcc239d6a68c9d9db753f09b0ccba385 184 SMART SM00507 75 128 2.2E-13 T 14-10-2018 IPR003615 HNH nuclease AMBLS11_09665 9f5554a3ba1088a6c983ee393ef72fb1 370 Gene3D G3DSA:3.40.50.300 6 355 1.0E-22 T 14-10-2018 AMBLS11_09665 9f5554a3ba1088a6c983ee393ef72fb1 370 SUPERFAMILY SSF52540 7 356 5.29E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09665 9f5554a3ba1088a6c983ee393ef72fb1 370 PIRSF PIRSF029347 5 91 1.4E-10 T 14-10-2018 IPR014555 RecF-like AMBLS11_09665 9f5554a3ba1088a6c983ee393ef72fb1 370 PIRSF PIRSF029347 125 354 7.0E-29 T 14-10-2018 IPR014555 RecF-like AMBLS11_09665 9f5554a3ba1088a6c983ee393ef72fb1 370 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 29 318 7.6E-23 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMBLS11_09645 4f081d104d8f1053edb7a00909552b65 660 SUPERFAMILY SSF52540 16 171 1.17E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09645 4f081d104d8f1053edb7a00909552b65 660 Gene3D G3DSA:3.40.50.300 11 186 6.1E-8 T 14-10-2018 AMBLS11_00640 3354e5ccb1f46ec283620ac77d2a23ff 200 Pfam PF01810 LysE type translocator 15 198 3.6E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMBLS11_05450 dc7132c5304f9ae4d1406e986d8ecc0e 188 Gene3D G3DSA:3.40.50.360 1 188 1.6E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_05450 dc7132c5304f9ae4d1406e986d8ecc0e 188 Pfam PF03358 NADPH-dependent FMN reductase 2 153 1.4E-40 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMBLS11_05450 dc7132c5304f9ae4d1406e986d8ecc0e 188 SUPERFAMILY SSF52218 3 183 1.38E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMBLS11_10610 39432171327f7017ac909b64ce6370d9 352 SUPERFAMILY SSF56112 13 342 3.06E-63 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMBLS11_10610 39432171327f7017ac909b64ce6370d9 352 Gene3D G3DSA:3.90.1200.10 113 352 3.0E-87 T 14-10-2018 AMBLS11_10610 39432171327f7017ac909b64ce6370d9 352 Pfam PF01636 Phosphotransferase enzyme family 35 259 1.4E-53 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMBLS11_10610 39432171327f7017ac909b64ce6370d9 352 Gene3D G3DSA:3.30.200.20 11 112 2.0E-35 T 14-10-2018 AMBLS11_13820 b15c981f7d9ee32a22e1173c9b51d226 291 SUPERFAMILY SSF103481 48 143 1.7E-5 T 14-10-2018 AMBLS11_13820 b15c981f7d9ee32a22e1173c9b51d226 291 SUPERFAMILY SSF103481 202 290 4.05E-5 T 14-10-2018 AMBLS11_15355 1c68bdac925aaa153fac6f023a9b727a 676 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 495 1.4E-185 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AMBLS11_15355 1c68bdac925aaa153fac6f023a9b727a 676 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 495 2.2E-150 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AMBLS11_04355 b6da97196696ace6deefef844aa01743 69 Pfam PF04995 Heme exporter protein D (CcmD) 13 54 8.2E-14 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AMBLS11_04355 b6da97196696ace6deefef844aa01743 69 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 55 6.2E-17 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AMBLS11_05260 38df78f3201f27e73581ba15dd448104 217 SUPERFAMILY SSF52833 2 90 1.87E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_05260 38df78f3201f27e73581ba15dd448104 217 Gene3D G3DSA:3.40.30.10 5 84 2.3E-27 T 14-10-2018 AMBLS11_05260 38df78f3201f27e73581ba15dd448104 217 Gene3D G3DSA:1.20.1050.10 90 217 3.7E-49 T 14-10-2018 AMBLS11_05260 38df78f3201f27e73581ba15dd448104 217 SUPERFAMILY SSF47616 88 215 1.18E-25 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMBLS11_05260 38df78f3201f27e73581ba15dd448104 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 85 1.4E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMBLS11_05260 38df78f3201f27e73581ba15dd448104 217 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 216 2.2E-86 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 AMBLS11_05465 10918100e2a10ce4f147616f4ef2c937 418 Pfam PF11199 Protein of unknown function (DUF2891) 89 410 1.5E-134 T 14-10-2018 IPR021365 Protein of unknown function DUF2891 AMBLS11_10955 c10b8df9e402dbdb516c58f146e066ea 108 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 62 1.0E-16 T 14-10-2018 AMBLS11_16750 7f6e9e89876b0470ff67bc862a73effa 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 145 8.3E-63 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AMBLS11_16750 7f6e9e89876b0470ff67bc862a73effa 145 SUPERFAMILY SSF69500 4 144 1.31E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AMBLS11_16750 7f6e9e89876b0470ff67bc862a73effa 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.232 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AMBLS11_16750 7f6e9e89876b0470ff67bc862a73effa 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 143 2.0E-53 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AMBLS11_16750 7f6e9e89876b0470ff67bc862a73effa 145 Gene3D G3DSA:3.50.80.10 1 145 4.7E-56 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AMBLS11_06640 b44ce2ec1f705f38504889161ce38b39 431 Pfam PF02447 GntP family permease 5 237 3.2E-8 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMBLS11_03555 773992b6b7b76d97a5e5258c2e4e5478 271 Pfam PF06468 Spondin_N 36 167 2.4E-6 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AMBLS11_03555 773992b6b7b76d97a5e5258c2e4e5478 271 Gene3D G3DSA:2.60.40.2130 17 183 3.0E-10 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AMBLS11_05500 2aa5414bd0f50413758b680947b1f450 145 Pfam PF09945 Predicted membrane protein (DUF2177) 13 133 9.5E-36 T 14-10-2018 IPR018687 Protein of unknown function DUF2177, membrane AMBLS11_17355 95d39e1516e68f4c2d0d7fbd5ceadea3 154 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 5.9E-24 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain AMBLS11_17355 95d39e1516e68f4c2d0d7fbd5ceadea3 154 SUPERFAMILY SSF103039 1 152 3.66E-34 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_17355 95d39e1516e68f4c2d0d7fbd5ceadea3 154 Gene3D G3DSA:3.40.1550.10 1 154 5.6E-45 T 14-10-2018 IPR028976 CheC-like superfamily AMBLS11_10185 50f59495923103153af6142ad9025cf1 264 Pfam PF01548 Transposase 9 157 3.5E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_00425 d90424c7babfe818d4dbe6e6b6363dc5 373 Pfam PF12698 ABC-2 family transporter protein 24 362 9.4E-31 T 14-10-2018 AMBLS11_15415 c7b4a76142d5636dbb19d7f609213543 272 Gene3D G3DSA:3.40.30.10 38 167 8.6E-15 T 14-10-2018 AMBLS11_15415 c7b4a76142d5636dbb19d7f609213543 272 SUPERFAMILY SSF52833 52 164 1.06E-7 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_15415 c7b4a76142d5636dbb19d7f609213543 272 Pfam PF13899 Thioredoxin-like 51 135 1.2E-9 T 14-10-2018 AMBLS11_10190 55558e19ccef44f8d198edde3df43d71 149 Pfam PF14078 Domain of unknown function (DUF4259) 20 137 5.1E-23 T 14-10-2018 IPR025355 Protein of unknown function DUF4259 AMBLS11_10520 5447ee465ef9dac13a97458cfbbe45ae 130 Gene3D G3DSA:2.20.25.10 1 33 7.6E-8 T 14-10-2018 AMBLS11_10520 5447ee465ef9dac13a97458cfbbe45ae 130 Pfam PF02566 OsmC-like protein 27 125 1.0E-19 T 14-10-2018 IPR003718 OsmC/Ohr family AMBLS11_10520 5447ee465ef9dac13a97458cfbbe45ae 130 Gene3D G3DSA:3.30.300.20 34 130 3.2E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMBLS11_10520 5447ee465ef9dac13a97458cfbbe45ae 130 SUPERFAMILY SSF82784 1 129 1.7E-37 T 14-10-2018 IPR036102 OsmC/Ohr superfamily AMBLS11_08845 cb1c4fe7394784f3b06c8dc1b254db82 156 Pfam PF11143 Protein of unknown function (DUF2919) 5 150 1.7E-31 T 14-10-2018 IPR021318 Protein of unknown function DUF2919 AMBLS11_13755 4fdaa4005d4fa935b586b738467f6dc8 450 Gene3D G3DSA:1.20.1250.20 242 448 4.9E-39 T 14-10-2018 AMBLS11_13755 4fdaa4005d4fa935b586b738467f6dc8 450 SUPERFAMILY SSF103473 11 444 2.22E-26 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_13755 4fdaa4005d4fa935b586b738467f6dc8 450 Gene3D G3DSA:1.20.1250.20 17 235 6.3E-48 T 14-10-2018 AMBLS11_13755 4fdaa4005d4fa935b586b738467f6dc8 450 Pfam PF07690 Major Facilitator Superfamily 25 408 2.9E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_06610 937f2fbd16cc2b6352ea1c1d887d1f6a 291 Gene3D G3DSA:3.40.50.10330 22 286 3.4E-93 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMBLS11_06610 937f2fbd16cc2b6352ea1c1d887d1f6a 291 Pfam PF01513 ATP-NAD kinase 5 270 2.0E-68 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMBLS11_06610 937f2fbd16cc2b6352ea1c1d887d1f6a 291 SUPERFAMILY SSF111331 5 288 7.46E-89 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMBLS11_06610 937f2fbd16cc2b6352ea1c1d887d1f6a 291 Gene3D G3DSA:2.60.200.30 126 263 3.4E-93 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMBLS11_06610 937f2fbd16cc2b6352ea1c1d887d1f6a 291 Hamap MF_00361 NAD kinase [nadK]. 4 286 33.153 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMBLS11_11245 5aecb4f40515ce59f741b3092e0aee46 288 Pfam PF01965 DJ-1/PfpI family 61 182 1.1E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMBLS11_11245 5aecb4f40515ce59f741b3092e0aee46 288 Gene3D G3DSA:3.40.50.880 3 288 4.8E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_11245 5aecb4f40515ce59f741b3092e0aee46 288 SUPERFAMILY SSF52317 34 283 6.07E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMBLS11_15670 ae5d23243d9c5b5e5c3f5f60f5014cc7 270 Pfam PF11101 Protein of unknown function (DUF2884) 32 260 4.3E-65 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 AMBLS11_14150 d1935e793e98dda243828a3c5411620d 105 SUPERFAMILY SSF51316 1 82 3.66E-6 T 14-10-2018 IPR011057 Mss4-like superfamily AMBLS11_10090 94d1d15cd6cc91677f77b33284b3d677 224 Gene3D G3DSA:3.90.550.10 1 221 1.6E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_10090 94d1d15cd6cc91677f77b33284b3d677 224 Pfam PF12804 MobA-like NTP transferase domain 2 189 5.9E-26 T 14-10-2018 IPR025877 MobA-like NTP transferase AMBLS11_10090 94d1d15cd6cc91677f77b33284b3d677 224 SUPERFAMILY SSF53448 2 218 7.04E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_07735 d332bd45bb48aa957cde8fdf74cba3fd 100 SUPERFAMILY SSF141371 2 96 3.34E-11 T 14-10-2018 AMBLS11_07735 d332bd45bb48aa957cde8fdf74cba3fd 100 Gene3D G3DSA:2.40.10.220 4 100 1.4E-11 T 14-10-2018 AMBLS11_07735 d332bd45bb48aa957cde8fdf74cba3fd 100 Pfam PF07238 PilZ domain 7 98 2.0E-13 T 14-10-2018 IPR009875 PilZ domain GO:0035438 AMBLS11_16005 3db55ad501552ad243c8ab51595c2881 403 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 2.3E-73 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AMBLS11_16005 3db55ad501552ad243c8ab51595c2881 403 Pfam PF07670 Nucleoside recognition 89 185 3.6E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMBLS11_16005 3db55ad501552ad243c8ab51595c2881 403 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 77 5.5E-21 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AMBLS11_16005 3db55ad501552ad243c8ab51595c2881 403 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 399 2.4E-147 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AMBLS11_00315 1226d7a861312f8a7f535c8624beae0f 137 Pfam PF03748 Flagellar basal body-associated protein FliL 32 135 1.2E-17 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMBLS11_13805 e4b35c71668282af4f250374bc1fd2a2 544 Pfam PF02652 L-lactate permease 8 535 8.2E-105 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AMBLS11_09915 93a47c5f6cdf19ea93a80f272dbb6cec 90 SUPERFAMILY SSF54292 18 88 2.23E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMBLS11_09915 93a47c5f6cdf19ea93a80f272dbb6cec 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMBLS11_09915 93a47c5f6cdf19ea93a80f272dbb6cec 90 Gene3D G3DSA:3.10.20.30 1 89 9.1E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMBLS11_09915 93a47c5f6cdf19ea93a80f272dbb6cec 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 20 80 1.5E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMBLS11_05280 72ce05d0c7102612187585eaa201552f 362 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 3 340 33.198 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMBLS11_05280 72ce05d0c7102612187585eaa201552f 362 Pfam PF03301 Tryptophan 2,3-dioxygenase 9 340 2.0E-100 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMBLS11_05280 72ce05d0c7102612187585eaa201552f 362 SUPERFAMILY SSF140959 10 340 1.18E-76 T 14-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMBLS11_05280 72ce05d0c7102612187585eaa201552f 362 Gene3D G3DSA:1.20.58.480 8 204 8.9E-67 T 14-10-2018 AMBLS11_09570 ad1212cfc2f9c7c9f232193e1983933d 215 Pfam PF11205 Protein of unknown function (DUF2987) 23 167 1.6E-44 T 14-10-2018 IPR021370 Protein of unknown function DUF2987 AMBLS11_08165 785248b348bef511e6fb5d63cb669ec4 356 SUPERFAMILY SSF63829 14 352 1.34E-42 T 14-10-2018 AMBLS11_08165 785248b348bef511e6fb5d63cb669ec4 356 Pfam PF03088 Strictosidine synthase 144 237 2.9E-23 T 14-10-2018 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 AMBLS11_08165 785248b348bef511e6fb5d63cb669ec4 356 Gene3D G3DSA:2.120.10.30 48 356 2.5E-66 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMBLS11_01295 b58e7802a0d54ea8e7189fbd672d0ba7 174 SUPERFAMILY SSF46626 97 173 9.15E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_01295 b58e7802a0d54ea8e7189fbd672d0ba7 174 SUPERFAMILY SSF46626 5 87 1.63E-6 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_01295 b58e7802a0d54ea8e7189fbd672d0ba7 174 Pfam PF00034 Cytochrome c 108 173 1.0E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_01295 b58e7802a0d54ea8e7189fbd672d0ba7 174 Gene3D G3DSA:1.10.760.10 83 174 3.3E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMBLS11_18170 f9c4277261e5796353cda27172dd02ff 253 Gene3D G3DSA:2.60.40.1190 31 252 4.4E-36 T 14-10-2018 AMBLS11_18170 f9c4277261e5796353cda27172dd02ff 253 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 38 119 0.001 T 14-10-2018 AMBLS11_18170 f9c4277261e5796353cda27172dd02ff 253 Pfam PF06452 Carbohydrate family 9 binding domain-like 40 252 7.8E-51 T 14-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMBLS11_18170 f9c4277261e5796353cda27172dd02ff 253 SUPERFAMILY SSF49344 31 252 1.14E-33 T 14-10-2018 AMBLS11_03105 14918a44e7a598ad53420242640d3b52 134 SUPERFAMILY SSF53850 14 132 3.04E-16 T 14-10-2018 AMBLS11_03105 14918a44e7a598ad53420242640d3b52 134 Gene3D G3DSA:3.40.190.10 18 133 5.1E-12 T 14-10-2018 AMBLS11_17970 cb51524b8bf4ae309d576d5b44f0fc13 608 Pfam PF05960 Bacterial protein of unknown function (DUF885) 62 598 2.5E-170 T 14-10-2018 IPR010281 Protein of unknown function DUF885 AMBLS11_00125 ce0847617c813887302a7af104f81acb 158 Pfam PF04361 Protein of unknown function (DUF494) 1 158 6.9E-62 T 14-10-2018 IPR007456 Smg AMBLS11_00125 ce0847617c813887302a7af104f81acb 158 Hamap MF_00598 Protein Smg [smg]. 1 158 32.266 T 14-10-2018 IPR007456 Smg AMBLS11_13460 fe3276ea4f44092d0922f657c4ceae76 196 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 13 189 8.4E-41 T 14-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE AMBLS11_00485 caa67830ae14f78be731a2606f30aa57 264 SUPERFAMILY SSF69572 18 263 1.14E-56 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMBLS11_00485 caa67830ae14f78be731a2606f30aa57 264 Gene3D G3DSA:3.40.50.720 18 264 7.4E-60 T 14-10-2018 AMBLS11_00485 caa67830ae14f78be731a2606f30aa57 264 Pfam PF00899 ThiF family 26 260 8.5E-41 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMBLS11_02645 8af1d2da7dbeaf23cf1673eb71b6dd2b 192 Pfam PF09335 SNARE associated Golgi protein 53 157 3.7E-13 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMBLS11_17875 4e1c96553dc2a0f67c17ef394255b54f 264 Pfam PF10670 Domain of unknown function (DUF4198) 21 241 9.9E-42 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 AMBLS11_14530 0e6b545b43bf5851e08ae6039d596904 413 Gene3D G3DSA:3.30.565.10 280 406 9.5E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMBLS11_14530 0e6b545b43bf5851e08ae6039d596904 413 Pfam PF07730 Histidine kinase 215 280 1.2E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMBLS11_12520 f070bbc255a5ad7e6502bd060cc0234a 73 SUPERFAMILY SSF46955 18 70 4.49E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMBLS11_11135 2916460850eb6179ac281e35c46a6343 161 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 154 7.4E-30 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AMBLS11_07995 47963ac3068f919900af63d30d5e135f 132 Pfam PF12514 Protein of unknown function (DUF3718) 34 101 3.7E-23 T 14-10-2018 IPR022193 Protein of unknown function DUF3718 AMBLS11_12915 9d9ab677aef570221bf28b82f65a6afd 478 Pfam PF01458 Uncharacterized protein family (UPF0051) 217 449 2.7E-66 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMBLS11_12915 9d9ab677aef570221bf28b82f65a6afd 478 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 12 469 3.5E-195 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AMBLS11_12915 9d9ab677aef570221bf28b82f65a6afd 478 SUPERFAMILY SSF101960 33 475 4.97E-140 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AMBLS11_11600 b548c284c3d55f407c472372a7623cb8 149 Gene3D G3DSA:3.10.129.10 7 142 4.8E-29 T 14-10-2018 AMBLS11_11600 b548c284c3d55f407c472372a7623cb8 149 Pfam PF01643 Acyl-ACP thioesterase 41 144 1.0E-7 T 14-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 AMBLS11_11600 b548c284c3d55f407c472372a7623cb8 149 SUPERFAMILY SSF54637 8 144 3.98E-32 T 14-10-2018 IPR029069 HotDog domain superfamily AMBLS11_08170 d613f12064c314c2a8cb7f38e4991888 551 Gene3D G3DSA:2.30.42.10 147 250 2.5E-65 T 14-10-2018 AMBLS11_08170 d613f12064c314c2a8cb7f38e4991888 551 SUPERFAMILY SSF52096 139 470 1.82E-32 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMBLS11_08170 d613f12064c314c2a8cb7f38e4991888 551 Pfam PF03572 Peptidase family S41 266 417 1.1E-14 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMBLS11_08170 d613f12064c314c2a8cb7f38e4991888 551 Gene3D G3DSA:3.90.226.10 251 488 2.5E-65 T 14-10-2018 AMBLS11_08170 d613f12064c314c2a8cb7f38e4991888 551 Gene3D G3DSA:3.30.750.170 96 446 2.5E-65 T 14-10-2018 AMBLS11_08170 d613f12064c314c2a8cb7f38e4991888 551 SUPERFAMILY SSF50156 148 250 3.46E-7 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMBLS11_07630 17c943ba63f2a93fb01915a246fd9178 298 SUPERFAMILY SSF51569 3 292 2.2E-72 T 14-10-2018 AMBLS11_07630 17c943ba63f2a93fb01915a246fd9178 298 Gene3D G3DSA:3.20.20.70 1 298 3.8E-132 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMBLS11_07630 17c943ba63f2a93fb01915a246fd9178 298 Pfam PF00682 HMGL-like 6 279 4.1E-55 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMBLS11_16625 515ad77992ae29956e123afb5392bf38 356 Pfam PF03929 PepSY-associated TM region 6 353 6.8E-53 T 14-10-2018 IPR005625 PepSY-associated TM protein AMBLS11_04830 9a0743f649a34a7a3133e48c1f0d8369 256 Gene3D G3DSA:3.40.50.2000 19 247 8.4E-21 T 14-10-2018 AMBLS11_04830 9a0743f649a34a7a3133e48c1f0d8369 256 SUPERFAMILY SSF53756 4 243 6.8E-25 T 14-10-2018 AMBLS11_04830 9a0743f649a34a7a3133e48c1f0d8369 256 Pfam PF00534 Glycosyl transferases group 1 63 203 2.4E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMBLS11_02475 8d618deaed374cc6c8507a4adba97fa7 372 SUPERFAMILY SSF56935 20 321 3.36E-18 T 14-10-2018 AMBLS11_04510 9036126944fb704570ab9491f1ade56c 165 SUPERFAMILY SSF49764 41 163 1.6E-39 T 14-10-2018 IPR008978 HSP20-like chaperone AMBLS11_04510 9036126944fb704570ab9491f1ade56c 165 Gene3D G3DSA:2.60.40.790 22 164 2.2E-39 T 14-10-2018 IPR008978 HSP20-like chaperone AMBLS11_04510 9036126944fb704570ab9491f1ade56c 165 Pfam PF00011 Hsp20/alpha crystallin family 61 163 2.6E-25 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AMBLS11_02760 2ddea69f756e95a53203058f3394126b 295 Pfam PF12048 Protein of unknown function (DUF3530) 35 263 4.4E-16 T 14-10-2018 IPR022529 Protein of unknown function DUF3530 AMBLS11_16775 9b0f77b04280565ad11cc9d97bbbfeb3 326 PIRSF PIRSF003097 22 322 6.2E-69 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 AMBLS11_06165 49307b71181a5d00813a6c9167277338 397 Pfam PF01610 Transposase 151 383 2.4E-54 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AMBLS11_06165 49307b71181a5d00813a6c9167277338 397 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 34 78 5.0E-6 T 14-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger AMBLS11_13465 2147cd2da966e1f0946bd76c28250fce 1181 SUPERFAMILY SSF103088 944 992 2.22E-5 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_13465 2147cd2da966e1f0946bd76c28250fce 1181 Pfam PF05359 Domain of Unknown Function (DUF748) 239 333 8.5E-9 T 14-10-2018 IPR008023 Protein of unknown function DUF748 AMBLS11_13465 2147cd2da966e1f0946bd76c28250fce 1181 Pfam PF05359 Domain of Unknown Function (DUF748) 735 880 1.8E-34 T 14-10-2018 IPR008023 Protein of unknown function DUF748 AMBLS11_13465 2147cd2da966e1f0946bd76c28250fce 1181 Pfam PF05359 Domain of Unknown Function (DUF748) 488 649 1.6E-19 T 14-10-2018 IPR008023 Protein of unknown function DUF748 AMBLS11_13465 2147cd2da966e1f0946bd76c28250fce 1181 Gene3D G3DSA:3.30.1330.60 939 1004 3.7E-5 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMBLS11_12475 ea2ac669d9765606c0df7779a0cb7fc4 105 SUPERFAMILY SSF47413 8 85 8.92E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMBLS11_07035 3b8c2983540216c46bdb8a8f9d2328ce 64 Pfam PF11446 Protein of unknown function (DUF2897) 3 51 1.4E-16 T 14-10-2018 IPR021550 Protein of unknown function DUF2897 AMBLS11_13985 2cff39d3024bccf791f0b1102c2e9289 75 Gene3D G3DSA:3.30.50.10 1 60 9.1E-22 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 AMBLS11_13985 2cff39d3024bccf791f0b1102c2e9289 75 SUPERFAMILY SSF57716 2 52 5.42E-19 T 14-10-2018 AMBLS11_13985 2cff39d3024bccf791f0b1102c2e9289 75 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 56 15.925 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AMBLS11_13985 2cff39d3024bccf791f0b1102c2e9289 75 Pfam PF03884 DNA gyrase inhibitor YacG 3 51 1.8E-23 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AMBLS11_00330 cbefccaac369e81d132fe06a980ef35a 83 Pfam PF04380 Membrane fusogenic activity 1 78 4.8E-30 T 14-10-2018 IPR007475 Membrane fusogenic activity AMBLS11_15875 6db583c1958d6b362b9357d8dd43ac62 446 PIRSF PIRSF002746 2 446 9.5E-150 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMBLS11_15875 6db583c1958d6b362b9357d8dd43ac62 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 445 1.9E-128 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMBLS11_15875 6db583c1958d6b362b9357d8dd43ac62 446 Pfam PF02447 GntP family permease 7 443 7.6E-138 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMBLS11_11070 eb7e72f147802b416dbd042d05ec3f53 268 Pfam PF13566 Domain of unknown function (DUF4130 80 239 6.1E-39 T 14-10-2018 IPR025404 Domain of unknown function DUF4130 AMBLS11_11070 eb7e72f147802b416dbd042d05ec3f53 268 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 12 240 1.6E-64 T 14-10-2018 IPR023875 DNA metabolism protein, putative AMBLS11_02255 4bbd69a6272ebc8f5d2a6ea029fe6a85 130 Pfam PF04219 Protein of unknown function, DUF 19 105 2.4E-30 T 14-10-2018 IPR007335 Protein of unknown function DUF413 AMBLS11_05990 d81c48a65fba73877b7fe31c3e674eaa 212 Pfam PF03458 UPF0126 domain 8 80 1.6E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 AMBLS11_05990 d81c48a65fba73877b7fe31c3e674eaa 212 Pfam PF03458 UPF0126 domain 94 166 1.8E-17 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 AMBLS11_08585 ca6776aa289d80149674698b793b2f87 176 Pfam PF11086 Protein of unknown function (DUF2878) 9 161 1.5E-37 T 14-10-2018 IPR021306 Protein of unknown function DUF2878 AMBLS11_09195 356a3594035970b6caeb54a7f2b6ae4d 179 Pfam PF14302 Domain of unknown function (DUF4377) 32 102 6.4E-7 T 14-10-2018 IPR025485 Domain of unknown function DUF4377 AMBLS11_00785 82a69457c3dac07c7f850aecb2c3fd64 231 Pfam PF04340 Protein of unknown function, DUF484 20 225 5.7E-43 T 14-10-2018 IPR007435 Protein of unknown function DUF484 AMBLS11_00785 82a69457c3dac07c7f850aecb2c3fd64 231 Gene3D G3DSA:3.30.450.40 58 228 3.2E-34 T 14-10-2018 IPR029016 GAF-like domain superfamily AMBLS11_16915 2090c807e71019f6ccac02d9a6395cdc 176 Pfam PF10029 Predicted periplasmic protein (DUF2271) 29 168 4.5E-42 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 AMBLS11_16915 2090c807e71019f6ccac02d9a6395cdc 176 PIRSF PIRSF014995 3 176 3.6E-51 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 AMBLS11_13725 4f4987611d070d2a302cb5a1583bb2e1 332 SUPERFAMILY SSF53474 113 290 8.59E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_13725 4f4987611d070d2a302cb5a1583bb2e1 332 Gene3D G3DSA:3.40.50.1820 90 311 4.6E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_03495 4e8a52c35161b5f03e9f6ac39c6762a3 121 SUPERFAMILY SSF49503 20 112 7.45E-15 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_03495 4e8a52c35161b5f03e9f6ac39c6762a3 121 Pfam PF13473 Cupredoxin-like domain 20 111 3.2E-22 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain AMBLS11_03495 4e8a52c35161b5f03e9f6ac39c6762a3 121 Gene3D G3DSA:2.60.40.420 19 112 2.1E-19 T 14-10-2018 IPR008972 Cupredoxin AMBLS11_15135 56e067b60f3b3762f491a231af300d58 287 Pfam PF00892 EamA-like transporter family 143 276 1.9E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMBLS11_03690 4a3d12b20503336a65c5990015da9efc 306 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 304 2.1E-83 T 14-10-2018 IPR007296 Domain of unknown function DUF403 AMBLS11_09650 48c97a43c3dca333ca6f8b815ed767ae 618 SUPERFAMILY SSF52540 12 171 7.37E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_09650 48c97a43c3dca333ca6f8b815ed767ae 618 Gene3D G3DSA:3.40.50.300 17 191 5.9E-8 T 14-10-2018 AMBLS11_09650 48c97a43c3dca333ca6f8b815ed767ae 618 SMART SM00487 16 192 0.007 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMBLS11_04165 5d8bf3850a4e1b1a285c2849c244a64e 591 Gene3D G3DSA:2.60.40.10 161 246 5.7E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_04165 5d8bf3850a4e1b1a285c2849c244a64e 591 Pfam PF07603 Protein of unknown function (DUF1566) 432 588 1.6E-28 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 AMBLS11_04165 5d8bf3850a4e1b1a285c2849c244a64e 591 Gene3D G3DSA:2.60.40.10 49 144 4.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_04165 5d8bf3850a4e1b1a285c2849c244a64e 591 Gene3D G3DSA:2.60.40.10 250 358 7.3E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMBLS11_13565 832f022dc78844dd073cbde5467e8e54 428 Gene3D G3DSA:1.10.287.470 168 231 5.0E-41 T 14-10-2018 AMBLS11_13565 832f022dc78844dd073cbde5467e8e54 428 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 119 340 8.1E-34 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMBLS11_13565 832f022dc78844dd073cbde5467e8e54 428 Gene3D G3DSA:2.40.420.20 112 407 5.0E-41 T 14-10-2018 AMBLS11_13565 832f022dc78844dd073cbde5467e8e54 428 SUPERFAMILY SSF111369 131 344 1.96E-9 T 14-10-2018 AMBLS11_13565 832f022dc78844dd073cbde5467e8e54 428 Gene3D G3DSA:2.40.30.170 120 347 5.0E-41 T 14-10-2018 AMBLS11_13565 832f022dc78844dd073cbde5467e8e54 428 Gene3D G3DSA:2.40.50.100 134 269 5.0E-41 T 14-10-2018 AMBLS11_14255 9ffa7f6a3d8f322e652515debfe2a61c 614 Pfam PF05960 Bacterial protein of unknown function (DUF885) 67 605 1.6E-154 T 14-10-2018 IPR010281 Protein of unknown function DUF885 AMBLS11_13360 8dd33b982dab078f05d5f14ea7403beb 172 Pfam PF06127 Protein of unknown function (DUF962) 1 152 1.1E-25 T 14-10-2018 IPR009305 Protein of unknown function DUF962 AMBLS11_00550 90f5e785cf8b2e883735dac7ac331805 235 Pfam PF00588 SpoU rRNA Methylase family 20 158 4.8E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMBLS11_00550 90f5e785cf8b2e883735dac7ac331805 235 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 215 3.1E-20 T 14-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AMBLS11_00550 90f5e785cf8b2e883735dac7ac331805 235 Gene3D G3DSA:3.40.1280.10 1 200 1.8E-61 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMBLS11_00550 90f5e785cf8b2e883735dac7ac331805 235 SUPERFAMILY SSF75217 4 183 1.05E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMBLS11_00550 90f5e785cf8b2e883735dac7ac331805 235 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 194 36.012 T 14-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AMBLS11_14435 1b23f7c49ff5ed1ecb6a988ebbef29ed 188 SUPERFAMILY SSF54626 47 186 7.19E-5 T 14-10-2018 IPR036298 Chalcone isomerase superfamily GO:0016872 AMBLS11_14435 1b23f7c49ff5ed1ecb6a988ebbef29ed 188 Gene3D G3DSA:3.50.70.10 27 170 5.3E-8 T 14-10-2018 IPR016088 Chalcone isomerase, 3-layer sandwich KEGG: 00941+5.5.1.6|MetaCyc: PWY-2002|MetaCyc: PWY-5059|MetaCyc: PWY-6325|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 AMBLS11_14435 1b23f7c49ff5ed1ecb6a988ebbef29ed 188 Pfam PF16036 Chalcone isomerase-like 49 186 5.5E-16 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 AMBLS11_03510 d36a3cdc80817d393998e7a782e08648 299 SUPERFAMILY SSF53850 36 247 3.15E-13 T 14-10-2018 AMBLS11_01255 3cca0afa023550c25dfd8cbb692dd3b2 159 Pfam PF14534 Domain of unknown function (DUF4440) 48 152 4.2E-10 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 AMBLS11_01255 3cca0afa023550c25dfd8cbb692dd3b2 159 SUPERFAMILY SSF54427 48 158 1.64E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMBLS11_01255 3cca0afa023550c25dfd8cbb692dd3b2 159 Gene3D G3DSA:3.10.450.50 35 158 1.0E-36 T 14-10-2018 AMBLS11_16690 59363b63a675e715b2a54a55b1807a38 192 SUPERFAMILY SSF110997 112 191 2.35E-21 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMBLS11_16690 59363b63a675e715b2a54a55b1807a38 192 Pfam PF05036 Sporulation related domain 114 179 1.5E-16 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMBLS11_16690 59363b63a675e715b2a54a55b1807a38 192 Gene3D G3DSA:3.30.70.1070 108 189 7.4E-29 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMBLS11_07580 91cbcbeb420e80e31218631cc0b21209 131 Pfam PF11042 Protein of unknown function (DUF2750) 29 128 7.0E-19 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 AMBLS11_17170 0bc35c96eea35aa8e5618b9f1833f99a 392 Pfam PF04235 Protein of unknown function (DUF418) 219 373 4.6E-21 T 14-10-2018 IPR007349 Domain of unknown function DUF418 AMBLS11_02375 78a30d63bf1134b130e65984e6654b0a 110 Pfam PF06127 Protein of unknown function (DUF962) 11 105 1.9E-38 T 14-10-2018 IPR009305 Protein of unknown function DUF962 AMBLS11_06285 9434b6b23ce319400cabbf30c3110066 351 Pfam PF04403 Paraquat-inducible protein A 191 347 2.1E-57 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like AMBLS11_06285 9434b6b23ce319400cabbf30c3110066 351 Pfam PF04403 Paraquat-inducible protein A 19 166 1.6E-34 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like AMBLS11_09080 0817ff3f966b88fdc732abc6e5c7dceb 304 SUPERFAMILY SSF52833 173 300 8.14E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_09080 0817ff3f966b88fdc732abc6e5c7dceb 304 Gene3D G3DSA:3.40.30.10 170 302 1.4E-13 T 14-10-2018 AMBLS11_08690 8744f73d79f1603067510320f2a051e2 343 Gene3D G3DSA:3.40.710.10 36 340 4.5E-64 T 14-10-2018 AMBLS11_08690 8744f73d79f1603067510320f2a051e2 343 SUPERFAMILY SSF56601 37 325 3.5E-64 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMBLS11_08690 8744f73d79f1603067510320f2a051e2 343 Pfam PF00144 Beta-lactamase 41 276 7.2E-40 T 14-10-2018 IPR001466 Beta-lactamase-related AMBLS11_00670 bd6085bf4850786ca499cf185a60658e 165 Gene3D G3DSA:3.40.50.1820 1 163 2.8E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_00670 bd6085bf4850786ca499cf185a60658e 165 SUPERFAMILY SSF53474 3 162 1.49E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_00670 bd6085bf4850786ca499cf185a60658e 165 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 94 4.7E-7 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AMBLS11_09365 081252af810779ca3fcdbf709bc7d8e0 455 Pfam PF07044 Protein of unknown function (DUF1329) 85 450 2.3E-158 T 14-10-2018 IPR010752 Protein of unknown function DUF1329 AMBLS11_13575 d1d5c472e0bda3ad341365c743c717bb 476 Gene3D G3DSA:2.160.20.10 45 469 2.5E-110 T 14-10-2018 IPR012334 Pectin lyase fold AMBLS11_13575 d1d5c472e0bda3ad341365c743c717bb 476 Pfam PF00295 Glycosyl hydrolases family 28 155 448 4.2E-16 T 14-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 AMBLS11_13575 d1d5c472e0bda3ad341365c743c717bb 476 SUPERFAMILY SSF51126 80 442 1.93E-69 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMBLS11_03470 7071b3e7a81df8397d7e5bd85ac9d76e 603 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 64 224 5.6E-15 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMBLS11_09120 686a349f189be13a93033cffe7eb70f3 153 Pfam PF06127 Protein of unknown function (DUF962) 1 148 1.1E-20 T 14-10-2018 IPR009305 Protein of unknown function DUF962 AMBLS11_10360 34ad4dea0a66c145762bea5155076d8f 822 Pfam PF14344 Domain of unknown function (DUF4397) 352 459 3.9E-12 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 AMBLS11_10360 34ad4dea0a66c145762bea5155076d8f 822 Pfam PF14344 Domain of unknown function (DUF4397) 38 158 2.7E-21 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 AMBLS11_10360 34ad4dea0a66c145762bea5155076d8f 822 Pfam PF14344 Domain of unknown function (DUF4397) 253 369 1.1E-21 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 AMBLS11_10360 34ad4dea0a66c145762bea5155076d8f 822 Pfam PF07452 CHRD domain 587 698 3.1E-24 T 14-10-2018 IPR010895 CHRD AMBLS11_10360 34ad4dea0a66c145762bea5155076d8f 822 Pfam PF07452 CHRD domain 711 816 6.6E-25 T 14-10-2018 IPR010895 CHRD AMBLS11_10360 34ad4dea0a66c145762bea5155076d8f 822 Pfam PF07452 CHRD domain 469 578 1.5E-28 T 14-10-2018 IPR010895 CHRD AMBLS11_10360 34ad4dea0a66c145762bea5155076d8f 822 SMART SM00754 704 818 8.9E-32 T 14-10-2018 IPR010895 CHRD AMBLS11_10360 34ad4dea0a66c145762bea5155076d8f 822 SMART SM00754 466 580 2.5E-23 T 14-10-2018 IPR010895 CHRD AMBLS11_10360 34ad4dea0a66c145762bea5155076d8f 822 SMART SM00754 586 700 3.1E-18 T 14-10-2018 IPR010895 CHRD AMBLS11_07395 0aaa5a9cabb6445f69e028a6e7f44219 440 Pfam PF04932 O-Antigen ligase 210 361 9.5E-9 T 14-10-2018 IPR007016 O-antigen ligase-related AMBLS11_01085 aa881b87321570fe766691e8b068b23d 239 Pfam PF02390 Putative methyltransferase 64 233 5.4E-61 T 14-10-2018 AMBLS11_01085 aa881b87321570fe766691e8b068b23d 239 Gene3D G3DSA:3.40.50.150 30 239 1.7E-70 T 14-10-2018 AMBLS11_01085 aa881b87321570fe766691e8b068b23d 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 51 238 1.4E-69 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AMBLS11_01085 aa881b87321570fe766691e8b068b23d 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.768 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AMBLS11_01085 aa881b87321570fe766691e8b068b23d 239 SUPERFAMILY SSF53335 16 237 1.31E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_15180 18f6efc0ecaa8d673d7e9e27385fd965 567 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 43 530 2.4E-72 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 AMBLS11_09920 c11625401d220941f89ed685265552db 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 1.2E-27 T 14-10-2018 IPR018680 Protein of unknown function DUF2164 AMBLS11_01385 0c54af15fe3e8731b21d0e8884b45e24 105 Pfam PF00665 Integrase core domain 8 94 7.1E-16 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMBLS11_01385 0c54af15fe3e8731b21d0e8884b45e24 105 SUPERFAMILY SSF53098 1 102 5.31E-19 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMBLS11_01385 0c54af15fe3e8731b21d0e8884b45e24 105 Gene3D G3DSA:3.30.420.10 1 105 5.1E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMBLS11_18780 cdb80ff566719275e41c8ae7448c9299 286 Pfam PF11219 Protein of unknown function (DUF3014) 122 277 1.9E-53 T 14-10-2018 IPR021382 Protein of unknown function DUF3014 AMBLS11_06940 640d45c4258f7a4b425762203d46a095 155 Pfam PF04241 Protein of unknown function (DUF423) 29 115 1.0E-30 T 14-10-2018 IPR006696 Protein of unknown function DUF423 AMBLS11_11335 87a4dbf9a0ba7bba02b1b9ba55c49aca 286 SUPERFAMILY SSF53335 114 251 3.01E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_11335 87a4dbf9a0ba7bba02b1b9ba55c49aca 286 Gene3D G3DSA:3.40.50.150 91 231 6.7E-12 T 14-10-2018 AMBLS11_11335 87a4dbf9a0ba7bba02b1b9ba55c49aca 286 Pfam PF08241 Methyltransferase domain 110 162 2.9E-6 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMBLS11_10850 1f65bb78cb96f6438a9f478248bfd196 148 Pfam PF04219 Protein of unknown function, DUF 13 99 6.2E-33 T 14-10-2018 IPR007335 Protein of unknown function DUF413 AMBLS11_11820 54119f9d6921dfd38ba0679a15911bff 190 Pfam PF04366 Las17-binding protein actin regulator 102 190 1.7E-10 T 14-10-2018 IPR007461 Ysc84 actin-binding domain AMBLS11_10690 aaab2df1cfc1e95f744c23b974dad230 256 Gene3D G3DSA:3.40.50.720 5 256 1.5E-78 T 14-10-2018 AMBLS11_10690 aaab2df1cfc1e95f744c23b974dad230 256 Pfam PF00899 ThiF family 13 253 2.7E-55 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMBLS11_10690 aaab2df1cfc1e95f744c23b974dad230 256 SUPERFAMILY SSF69572 5 254 6.41E-75 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMBLS11_18905 509598465a7278638614ff71f5e8c0ff 128 SMART SM01144 4 123 7.1E-4 T 14-10-2018 IPR005636 DTW AMBLS11_18905 509598465a7278638614ff71f5e8c0ff 128 Pfam PF03942 DTW domain 12 117 2.1E-19 T 14-10-2018 IPR005636 DTW AMBLS11_06325 2b8e72cdae2cd2005ba9242c8af1a8d0 173 Pfam PF11157 Protein of unknown function (DUF2937) 2 160 4.3E-42 T 14-10-2018 IPR022584 Protein of unknown function DUF2937 AMBLS11_14640 f45d3f58b006a6b10b6108422bed2c47 314 Pfam PF03186 CobD/Cbib protein 16 287 3.3E-28 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AMBLS11_08275 2702dff145fe58433a3f721c6aef1ead 903 SUPERFAMILY SSF56935 22 902 9.89E-97 T 14-10-2018 AMBLS11_08275 2702dff145fe58433a3f721c6aef1ead 903 Pfam PF00593 TonB dependent receptor 300 900 1.5E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMBLS11_08275 2702dff145fe58433a3f721c6aef1ead 903 Gene3D G3DSA:2.170.130.10 20 166 1.8E-26 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMBLS11_08275 2702dff145fe58433a3f721c6aef1ead 903 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 158 1.9E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain AMBLS11_08275 2702dff145fe58433a3f721c6aef1ead 903 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 14-10-2018 IPR010916 TonB box, conserved site AMBLS11_00190 853e22733a2fab5f1761e693d87f9709 243 Pfam PF00154 recA bacterial DNA recombination protein 19 126 9.4E-5 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMBLS11_00190 853e22733a2fab5f1761e693d87f9709 243 Gene3D G3DSA:3.40.50.300 44 150 2.0E-27 T 14-10-2018 AMBLS11_00190 853e22733a2fab5f1761e693d87f9709 243 SUPERFAMILY SSF52540 51 151 1.39E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMBLS11_10640 63e285aadf5e7f1261f3d7d4ee8595d8 225 SUPERFAMILY SSF52833 17 223 3.49E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMBLS11_10640 63e285aadf5e7f1261f3d7d4ee8595d8 225 Pfam PF01323 DSBA-like thioredoxin domain 18 218 1.5E-41 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMBLS11_10640 63e285aadf5e7f1261f3d7d4ee8595d8 225 Gene3D G3DSA:3.40.30.10 8 221 5.3E-70 T 14-10-2018 AMBLS11_04495 d1e7960a6ed869daed4814dd6902c749 121 Pfam PF11399 Protein of unknown function (DUF3192) 17 118 2.0E-39 T 14-10-2018 IPR021534 Protein of unknown function DUF3192 AMBLS11_11375 8ea0d1076b9d214cd048e297330b065b 204 Pfam PF07290 Protein of unknown function (DUF1449) 10 203 9.7E-62 T 14-10-2018 IPR010840 Protein of unknown function DUF1449 AMBLS11_16885 6b4b6c3dcd86872423dbb063865db87a 392 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 83 160 1.9E-18 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMBLS11_16885 6b4b6c3dcd86872423dbb063865db87a 392 SUPERFAMILY SSF74653 76 152 1.31E-21 T 14-10-2018 AMBLS11_16885 6b4b6c3dcd86872423dbb063865db87a 392 Gene3D G3DSA:3.30.1150.10 60 161 1.1E-24 T 14-10-2018 AMBLS11_16885 6b4b6c3dcd86872423dbb063865db87a 392 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 84 159 3.1E-14 T 14-10-2018 IPR006260 TonB/TolA, C-terminal AMBLS11_10165 dc16ed756e58a5d525aa3e0edb3a4d84 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 288 2.5E-11 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMBLS11_10165 dc16ed756e58a5d525aa3e0edb3a4d84 341 Pfam PF01548 Transposase 6 144 3.1E-12 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_16995 2e2f9119c78e0513038d41d6a9ac21e1 295 Pfam PF01963 TraB family 33 294 4.4E-67 T 14-10-2018 IPR002816 Pheromone shutdown, TraB AMBLS11_04315 33cb3bf212e4a78cce503f1901e198d0 650 Pfam PF09826 Beta propeller domain 92 636 1.5E-103 T 14-10-2018 IPR019198 Beta propeller domain-containing family AMBLS11_14725 baf85b494df5e257e318983195134d6b 148 SUPERFAMILY SSF55961 1 143 2.05E-32 T 14-10-2018 AMBLS11_14725 baf85b494df5e257e318983195134d6b 148 Gene3D G3DSA:3.30.530.20 1 145 1.3E-32 T 14-10-2018 IPR023393 START-like domain superfamily AMBLS11_14725 baf85b494df5e257e318983195134d6b 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 141 2.3E-21 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMBLS11_00705 e2a3478bb5d2dba803bc5cbd99e2e724 497 Pfam PF11737 Protein of unknown function (DUF3300) 39 270 3.1E-77 T 14-10-2018 IPR021728 Protein of unknown function DUF3300 AMBLS11_08315 cf1eec461201973b49924974328c3571 71 Pfam PF09656 Putative transmembrane protein (PGPGW) 2 51 2.4E-8 T 14-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane AMBLS11_03645 a38e58bf962626ccaae9b1488dc68a1d 102 Pfam PF13466 STAS domain 12 94 1.2E-12 T 14-10-2018 IPR002645 STAS domain AMBLS11_03645 a38e58bf962626ccaae9b1488dc68a1d 102 Gene3D G3DSA:3.30.750.24 5 102 1.3E-14 T 14-10-2018 IPR036513 STAS domain superfamily AMBLS11_03645 a38e58bf962626ccaae9b1488dc68a1d 102 SUPERFAMILY SSF52091 5 101 1.33E-13 T 14-10-2018 IPR036513 STAS domain superfamily AMBLS11_04135 f8254f989b984a575bd90bddbae46ea3 108 Pfam PF12514 Protein of unknown function (DUF3718) 40 99 1.1E-19 T 14-10-2018 IPR022193 Protein of unknown function DUF3718 AMBLS11_14810 127cbd66c054258d2513abeb79abb7de 235 Pfam PF03695 Uncharacterised protein family (UPF0149) 26 200 1.4E-9 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 AMBLS11_14810 127cbd66c054258d2513abeb79abb7de 235 SUPERFAMILY SSF101327 16 133 3.53E-5 T 14-10-2018 IPR036255 YgfB-like superfamily AMBLS11_07680 8911c52f39a05c716c8c80d97ffbb19e 551 Pfam PF03961 Flagellar Assembly Protein A 83 544 2.4E-114 T 14-10-2018 IPR005646 Flagellar assembly protein A AMBLS11_06365 e68fc11cd0ae2449e0f2d42482a76b27 315 Gene3D G3DSA:1.10.3470.10 1 314 7.9E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMBLS11_06365 e68fc11cd0ae2449e0f2d42482a76b27 315 Pfam PF01032 FecCD transport family 1 310 6.2E-73 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMBLS11_06365 e68fc11cd0ae2449e0f2d42482a76b27 315 SUPERFAMILY SSF81345 3 310 6.02E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMBLS11_16535 12023212a382532ee53e4032d5e9378f 457 PIRSF PIRSF006446 1 454 7.4E-171 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMBLS11_16535 12023212a382532ee53e4032d5e9378f 457 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 427 1.2E-152 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMBLS11_05515 d5aeff8cb66cdada72701ed5e046efce 325 SMART SM01321 14 188 0.0011 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AMBLS11_05515 d5aeff8cb66cdada72701ed5e046efce 325 SUPERFAMILY SSF143422 16 194 1.31E-21 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 AMBLS11_06470 c2078c808bc0010776f0ee179b2f5154 840 Pfam PF12704 MacB-like periplasmic core domain 23 221 2.1E-6 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMBLS11_06470 c2078c808bc0010776f0ee179b2f5154 840 Pfam PF02687 FtsX-like permease family 743 830 1.9E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMBLS11_06470 c2078c808bc0010776f0ee179b2f5154 840 Pfam PF02687 FtsX-like permease family 289 376 7.9E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMBLS11_13110 855075f8233e46a19dd7c21dd36f4f0d 390 Pfam PF00535 Glycosyl transferase family 2 54 186 1.7E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMBLS11_13110 855075f8233e46a19dd7c21dd36f4f0d 390 Gene3D G3DSA:3.90.550.10 31 260 5.6E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_13110 855075f8233e46a19dd7c21dd36f4f0d 390 SUPERFAMILY SSF53448 46 323 6.56E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMBLS11_00860 db6c35b744fdc444e749117ea1b2e311 232 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 130 220 6.9E-12 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMBLS11_00860 db6c35b744fdc444e749117ea1b2e311 232 SMART SM00702 3 221 2.4E-4 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMBLS11_08425 3f3e8f84d532ceedaa99ec0e2e0ee57f 279 Pfam PF10977 Protein of unknown function (DUF2797) 40 275 2.9E-92 T 14-10-2018 IPR021246 Protein of unknown function DUF2797 AMBLS11_04115 965d99b8d84fd08392c68d2181fefb2d 219 TIGRFAM TIGR04052 AZL_007920_fam: AZL_007920/MXAN_0976 family protein 15 210 2.1E-44 T 14-10-2018 IPR023977 Conserved hypotheical protein CHP04052 AMBLS11_09315 37db458c1149b0de1be4d04f2adc1d3b 243 Pfam PF04402 Protein of unknown function (DUF541) 44 239 1.4E-40 T 14-10-2018 IPR007497 Protein of unknown function DUF541 AMBLS11_09315 37db458c1149b0de1be4d04f2adc1d3b 243 Gene3D G3DSA:3.30.70.2970 56 162 6.9E-44 T 14-10-2018 AMBLS11_09315 37db458c1149b0de1be4d04f2adc1d3b 243 Gene3D G3DSA:3.30.110.170 46 239 6.9E-44 T 14-10-2018 AMBLS11_10095 4b2e22e0a05858f4c511d0d8b7454543 393 Pfam PF05762 VWA domain containing CoxE-like protein 186 273 1.1E-6 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like AMBLS11_15600 6f0d96e8cf3428778c3979cbf8544168 222 Pfam PF04012 PspA/IM30 family 2 221 5.3E-42 T 14-10-2018 IPR007157 PspA/IM30 AMBLS11_15600 6f0d96e8cf3428778c3979cbf8544168 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 220 4.0E-79 T 14-10-2018 IPR014319 Phage shock protein, PspA AMBLS11_08740 61bab025afbc8bb583eb18e776ecc023 571 Pfam PF07690 Major Facilitator Superfamily 245 460 1.0E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_08740 61bab025afbc8bb583eb18e776ecc023 571 Pfam PF07690 Major Facilitator Superfamily 44 188 7.7E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMBLS11_08740 61bab025afbc8bb583eb18e776ecc023 571 SUPERFAMILY SSF103473 21 560 2.75E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMBLS11_18880 81f6a667a717efe6cf2f51887b3f4768 372 Pfam PF07786 Protein of unknown function (DUF1624) 2 229 5.5E-14 T 14-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 AMBLS11_12345 0be1bd0754cbba90a292a9547c6c4ad8 308 Gene3D G3DSA:3.90.1690.10 2 308 4.6E-62 T 14-10-2018 AMBLS11_02540 dc7fedf2e4ffc687cdde82e5c88ce75a 165 Pfam PF01548 Transposase 6 144 4.1E-13 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_15350 9fab0e2e78ebd3074ce25346704f742a 254 Gene3D G3DSA:3.40.390.10 7 187 8.6E-14 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMBLS11_15350 9fab0e2e78ebd3074ce25346704f742a 254 SUPERFAMILY SSF55486 25 221 1.01E-17 T 14-10-2018 AMBLS11_15350 9fab0e2e78ebd3074ce25346704f742a 254 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 45 177 1.2E-19 T 14-10-2018 AMBLS11_03875 aede99659fcb28d6315f1206d6864622 423 Pfam PF01384 Phosphate transporter family 26 409 3.5E-111 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AMBLS11_16265 08740aa7cb5719a3a132b698f019bb9d 438 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 132 287 7.9E-11 T 14-10-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain AMBLS11_18280 a67bd966ad6ae4de76aee22bad998c0a 251 Pfam PF01203 Type II secretion system (T2SS), protein N 37 249 2.0E-49 T 14-10-2018 IPR022792 Type II secretion system, protein N AMBLS11_09445 04b037f11e91548a499c595762dfae9e 48 PIRSF PIRSF037205 1 48 5.3E-25 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 AMBLS11_09445 04b037f11e91548a499c595762dfae9e 48 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 2 39 5.2E-23 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 AMBLS11_03055 8671361820c74ac7e06ea2527e93bf3c 181 Pfam PF11454 Protein of unknown function (DUF3016) 28 170 2.7E-45 T 14-10-2018 IPR021557 Protein of unknown function DUF3016 AMBLS11_01450 51dc87dde70513fa10124e5d7bb62576 248 Pfam PF05275 Copper resistance protein B precursor (CopB) 36 248 9.3E-72 T 14-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AMBLS11_09545 96b2933aa477394f182a6d1e7276f2b4 219 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 212 3.8E-53 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain AMBLS11_02395 77234d9df0bf54e5d8132a996e166c17 60 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 57 4.1E-22 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 AMBLS11_15175 35b615efa70d6203858de46be03f9e8f 557 Pfam PF02690 Na+/Pi-cotransporter 180 256 1.2E-9 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AMBLS11_15175 35b615efa70d6203858de46be03f9e8f 557 Pfam PF02690 Na+/Pi-cotransporter 16 156 8.1E-39 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AMBLS11_09095 811bfc97ac149645b928340bc3ec55c5 368 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 358 2.4E-90 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AMBLS11_04740 a840747529c3751fe9e12721144af159 247 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 8.4E-32 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMBLS11_04740 a840747529c3751fe9e12721144af159 247 SUPERFAMILY SSF117143 77 205 9.02E-21 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMBLS11_04740 a840747529c3751fe9e12721144af159 247 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 4.4E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMBLS11_17110 c6569e7ce11b22c810bdfa9e5b1d592b 316 SUPERFAMILY SSF51430 8 314 4.98E-69 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_17110 c6569e7ce11b22c810bdfa9e5b1d592b 316 Pfam PF00248 Aldo/keto reductase family 11 306 4.9E-55 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMBLS11_17110 c6569e7ce11b22c810bdfa9e5b1d592b 316 Gene3D G3DSA:3.20.20.100 1 316 3.0E-89 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMBLS11_10130 85907798f91c1f77bf4c2c9ce7c53d53 156 Pfam PF01548 Transposase 12 154 1.4E-17 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMBLS11_05090 e1867f715996ed75b114755372de5db8 144 Pfam PF10975 Protein of unknown function (DUF2802) 77 141 1.8E-20 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 AMBLS11_05330 c122591996f5b04d96cb48d95a3e4fe0 174 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 161 5.1E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMBLS11_03195 ea484cad0c843bad95c1e57d96bd096e 303 Pfam PF04381 Putative exonuclease, RdgC 1 297 5.5E-96 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AMBLS11_15595 b7b304c8ce7b16745a7f1d5d7f295bd7 66 Pfam PF04024 PspC domain 7 64 1.1E-16 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMBLS11_01805 aae2b9ab53584c020cb2ce80cc49d909 172 Pfam PF10688 Bacterial inner membrane protein 6 165 8.7E-23 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AMBLS11_00285 c7dff53022d0e0e46157e2ad93ab4666 391 SUPERFAMILY SSF56935 19 391 1.22E-20 T 14-10-2018 AMBLS11_16925 3e1954457d62ebd93f8ecebcbb2f8479 116 Pfam PF11804 Protein of unknown function (DUF3325) 9 107 1.8E-14 T 14-10-2018 IPR021762 Protein of unknown function DUF3325 AMBLS11_16950 0eed26495a430a4124f3cff4f9aeed10 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 133 4.4E-26 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMBLS11_15145 e3a0103c58ed3a60be99fce4216aaa06 628 SUPERFAMILY SSF56935 47 626 4.4E-36 T 14-10-2018 AMBLS11_15145 e3a0103c58ed3a60be99fce4216aaa06 628 Gene3D G3DSA:2.40.170.20 152 628 4.9E-23 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMBLS11_08110 91306617f4d7cc8d2a7eeafcfa81d7ff 269 Gene3D G3DSA:1.20.5.170 208 247 1.8E-5 T 14-10-2018 AMBLS11_08110 91306617f4d7cc8d2a7eeafcfa81d7ff 269 SUPERFAMILY SSF57997 80 249 1.11E-5 T 14-10-2018 AMBLS11_10540 e662307a8ed2a58c19b42c6346a99ee3 114 Pfam PF12514 Protein of unknown function (DUF3718) 48 112 3.9E-6 T 14-10-2018 IPR022193 Protein of unknown function DUF3718 AMBLS11_10475 b1f28981aab8995c0bfbe7c452ffc26a 72 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 8.7E-19 T 14-10-2018 IPR021249 Protein of unknown function DUF2788 AMBLS11_12460 5eb44a7d41121c9cac785604e841d070 115 Pfam PF11686 Protein of unknown function (DUF3283) 4 45 3.4E-7 T 14-10-2018 IPR021700 Protein of unknown function DUF3283 AMBLS11_08230 6916604e70ed6c9d3b18e9ec0771c3f5 304 Pfam PF01758 Sodium Bile acid symporter family 12 196 2.0E-32 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AMBLS11_08230 6916604e70ed6c9d3b18e9ec0771c3f5 304 Gene3D G3DSA:1.20.1530.20 1 287 9.2E-81 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMBLS11_16285 1b563e4af765ee514acfca1cb74fe150 614 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 319 458 5.1E-9 T 14-10-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain AMBLS11_14630 0f0844cc127f0578560dcbaf79f459c6 195 Pfam PF10881 Protein of unknown function (DUF2726) 35 159 9.6E-37 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 AMBLS11_14630 0f0844cc127f0578560dcbaf79f459c6 195 PIRSF PIRSF028063 1 167 8.9E-14 T 14-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger AMBLS11_09995 78e946f6083a855f0a9d8bf9dc82d7b8 139 Pfam PF09842 Predicted membrane protein (DUF2069) 11 113 3.6E-33 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane AMBLS11_01990 8cffdf6163315c72bb4ab91df02a5e8e 66 Pfam PF11174 Protein of unknown function (DUF2970) 7 60 4.2E-20 T 14-10-2018 IPR021344 Protein of unknown function DUF2970 AMBLS11_16570 8b8748e809f2aa5f6199ee6e268db29b 211 Pfam PF02036 SCP-2 sterol transfer family 15 120 4.8E-10 T 14-10-2018 IPR003033 SCP2 sterol-binding domain AMBLS11_08205 a213b5a604ca54f17c1cb6efb86817de 218 Pfam PF11750 Protein of unknown function (DUF3307) 7 118 6.9E-29 T 14-10-2018 IPR021737 Bacteriophage phiKZ, Orf197 AMBLS11_13170 219040460e3478cdc194293150c26986 448 Pfam PF04932 O-Antigen ligase 218 335 2.2E-9 T 14-10-2018 IPR007016 O-antigen ligase-related AMBLS11_14430 53b3f47e3d5d031e1e970777ca1a3818 188 Pfam PF12915 Protein of unknown function (DUF3833) 22 185 2.6E-61 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 AMBLS11_01885 4355aaa095aa038a073c388efe232827 308 SUPERFAMILY SSF54909 1 300 1.79E-87 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMBLS11_01885 4355aaa095aa038a073c388efe232827 308 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 7 297 1.1E-47 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AMBLS11_01885 4355aaa095aa038a073c388efe232827 308 Pfam PF04261 Dyp-type peroxidase family 37 297 1.5E-51 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AMBLS11_11300 d655633fb1ffe629c1f9784d21a68624 59 Pfam PF14145 YrhK-like protein 15 52 2.2E-8 T 14-10-2018 IPR025424 YrhK domain AMBLS11_11210 2496b4cb02d628a0c0b8ab4765b0633a 203 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 178 200 7.7E-4 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain AMBLS11_04305 c1b83320cf8061dd49e66b947818a1f0 125 Pfam PF11456 Protein of unknown function (DUF3019) 26 124 1.5E-13 T 14-10-2018 IPR021559 Protein of unknown function DUF3019 AMBLS11_18115 bd735ca58487619ba3dd25c957aafe02 63 PIRSF PIRSF037225 3 63 4.9E-18 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 AMBLS11_18115 bd735ca58487619ba3dd25c957aafe02 63 Pfam PF14255 Cysteine-rich CPXCG 10 57 6.2E-13 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein AMBLS11_09970 48ad72d62d852394b3c31c4808bae962 357 Pfam PF01594 AI-2E family transporter 20 345 1.9E-65 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like AMBLS11_07085 819b176ccf8a19ae135e1b2e4d328157 358 SUPERFAMILY SSF52151 33 314 4.08E-13 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMBLS11_11455 859cfc449939c41d9fecf594fe3bf4d7 199 Pfam PF06930 Protein of unknown function (DUF1282) 9 180 2.0E-38 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 AMBLS11_11095 620bbe66c6c6d61ad7706448022e4e6a 221 Pfam PF08892 YqcI/YcgG family 13 217 3.9E-62 T 14-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG AMBLS11_13895 c071dd8b93d38bcee80d51c03a83c13d 109 Pfam PF06945 Protein of unknown function (DUF1289) 31 77 6.7E-16 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 AMBLS11_15085 9c1d3315f325bcb8d5efbfcecf1ae543 478 Pfam PF03929 PepSY-associated TM region 15 358 9.9E-47 T 14-10-2018 IPR005625 PepSY-associated TM protein AMBLS11_11015 21c3f26d8655fa44d5de9216a5355cbf 359 Gene3D G3DSA:3.40.50.1820 124 324 6.5E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_11015 21c3f26d8655fa44d5de9216a5355cbf 359 SUPERFAMILY SSF53474 110 294 9.92E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMBLS11_04175 8fc37091f7d46ed8ca8961427332b4f1 219 Pfam PF11101 Protein of unknown function (DUF2884) 2 211 8.8E-58 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 AMBLS11_03465 773aab5daa1330f36a50b4e0591da6d6 247 Pfam PF12261 Thermostable hemolysin 34 204 5.0E-47 T 14-10-2018 IPR022050 Thermostable hemolysin AMBLS11_06395 ec72c103e97982c3af0316bca63c1a46 454 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 44 426 4.4E-108 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AMBLS11_06395 ec72c103e97982c3af0316bca63c1a46 454 Pfam PF02386 Cation transport protein 43 437 5.9E-57 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AMBLS11_14935 dd76d653b8f6780ea6cc285e756e2e04 194 Pfam PF06271 RDD family 39 178 1.4E-15 T 14-10-2018 IPR010432 RDD AMBLS11_12500 86d61c5907806e5c257b7d4f26334875 301 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 43 230 3.0E-27 T 14-10-2018 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain AMBLS11_09760 3eee17b2c5fb3bad1b58fa1dd5c2307c 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.8E-46 T 14-10-2018 IPR006214 Bax inhibitor 1-related AMBLS11_11780 2992cf4b526def9f4c6f034347a198c1 232 Pfam PF09335 SNARE associated Golgi protein 64 182 7.7E-26 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMBLS11_05600 3b358f22a85331841b56d36a11ddf49d 515 Pfam PF04293 SpoVR like protein 26 456 6.6E-174 T 14-10-2018 IPR007390 Sporulation stage V, protein R AMBLS11_16930 95557db2033615adfc98c3a14e57ce7c 531 Pfam PF03929 PepSY-associated TM region 3 362 1.4E-58 T 14-10-2018 IPR005625 PepSY-associated TM protein AMBLS11_15520 70bbc3bc4c2c0f2e7f5badb430da45e5 437 Pfam PF14285 Domain of unknown function (DUF4367) 203 292 3.7E-5 T 14-10-2018 IPR025377 Domain of unknown function DUF4367 AMBLS11_17730 9c310806c0b9aded41545e30bef6ec31 147 Pfam PF11026 Protein of unknown function (DUF2721) 15 141 9.2E-37 T 14-10-2018 IPR021279 Protein of unknown function DUF2721 AMBLS11_15840 1e5a22800ae9a1baf329e91c49012293 156 Pfam PF05360 yiaA/B two helix domain 11 63 1.7E-21 T 14-10-2018 IPR008024 YiaAB two helix AMBLS11_15840 1e5a22800ae9a1baf329e91c49012293 156 Pfam PF05360 yiaA/B two helix domain 74 126 1.3E-17 T 14-10-2018 IPR008024 YiaAB two helix AMBLS11_04985 0aa3d30c5f4ed08460cc74bd13a085fa 179 Pfam PF03748 Flagellar basal body-associated protein FliL 78 179 3.3E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMBLS11_14705 2aaef64b1aab059caad6e53f2ad3e01b 417 Pfam PF03600 Citrate transporter 10 360 6.6E-23 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AMBLS11_11395 b82f010dca4b943f67ef32bab7d90a53 60 Pfam PF09791 Oxidoreductase-like protein, N-terminal 4 45 1.5E-11 T 14-10-2018 IPR019180 Oxidoreductase-like, N-terminal AMBLS11_05830 25721501c92ee449b3e84fd9b3e76a57 606 Pfam PF13584 Oxygen tolerance 19 476 5.2E-102 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD AMBLS11_05485 a4ddae93d9401a2e924fd1d59f79e111 292 Pfam PF04224 Protein of unknown function, DUF417 141 269 1.4E-17 T 14-10-2018 IPR007339 Inner membrane protein RclC-like AMBLS11_15385 5fdf2f3da7274e0cff3a34bb82f6953b 130 Pfam PF10627 Curli assembly protein CsgE 28 129 1.2E-24 T 14-10-2018 IPR018900 Curli assembly protein CsgE AMBLS11_02780 7ef091de9fc3bd194d9fd33d79ba5388 455 SUPERFAMILY SSF55486 217 389 1.07E-5 T 14-10-2018 AMBLS11_17255 68cb42990f88c4c2a56179e8377dce18 133 Pfam PF13430 Domain of unknown function (DUF4112) 11 110 5.9E-33 T 14-10-2018 IPR025187 Protein of unknown function DUF4112 AMBLS11_11955 2cf3a00a53ac8300f6ce7e4b689a695a 279 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 246 268 7.6E-5 T 14-10-2018 IPR013424 PEP-CTERM protein-sorting domain AMBLS11_16315 c40ffb92988c706f88e66612567da926 539 Gene3D G3DSA:3.40.50.150 314 525 5.6E-11 T 14-10-2018 AMBLS11_16315 c40ffb92988c706f88e66612567da926 539 SUPERFAMILY SSF53335 325 428 3.6E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_07340 ccf4a0189df5af9fe57d770661faef01 401 Pfam PF10082 Putative beta-barrel porin 2 24 399 7.0E-34 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 AMBLS11_11100 92657249c5e5b30e006acf0eef7c9310 197 Pfam PF09347 Domain of unknown function (DUF1989) 4 168 2.4E-50 T 14-10-2018 IPR018959 Protein of unknown function DUF1989 AMBLS11_15375 8b4decb34569ba71ce1f276901db400a 253 Gene3D G3DSA:3.40.50.10610 32 124 4.1E-34 T 14-10-2018 AMBLS11_15375 8b4decb34569ba71ce1f276901db400a 253 Gene3D G3DSA:3.40.50.10610 125 253 7.7E-48 T 14-10-2018 AMBLS11_15375 8b4decb34569ba71ce1f276901db400a 253 Pfam PF03783 Curli production assembly/transport component CsgG 44 251 1.9E-78 T 14-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 AMBLS11_11305 b9ac34e40bdcf49cd5b9054020d98b97 153 Pfam PF01610 Transposase 15 139 1.3E-25 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AMBLS11_18615 dc31ccb261d8af665423debff9fa8733 234 Pfam PF02104 SURF1 family 18 216 1.1E-30 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMBLS11_02670 40435b2e9028644b12749f352aaa8847 96 Hamap MF_00599 Cell division protein FtsB [ftsB]. 5 93 34.086 T 14-10-2018 IPR023081 Cell division protein FtsB AMBLS11_02670 40435b2e9028644b12749f352aaa8847 96 Pfam PF04977 Septum formation initiator 14 91 7.0E-25 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AMBLS11_05000 55d8c1e873dfa2804a82a021fae125ce 93 Pfam PF04347 Flagellar biosynthesis protein, FliO 1 73 3.6E-14 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AMBLS11_10300 118d080f6a5b087975179d11a30795a0 150 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 26 132 1.6E-8 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT AMBLS11_14230 59c8b7efc1ee1ffcf6dae2908e6d8e37 178 Pfam PF02325 YGGT family 106 171 3.0E-20 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 AMBLS11_14230 59c8b7efc1ee1ffcf6dae2908e6d8e37 178 Pfam PF02325 YGGT family 10 76 1.3E-17 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 AMBLS11_02430 7413275bda877e0fffeba424d4477e2e 458 Pfam PF03553 Na+/H+ antiporter family 171 452 3.1E-46 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AMBLS11_01330 473722a10a85bbc0250b2016a9a01dbc 363 Gene3D G3DSA:1.20.1740.10 51 361 8.6E-6 T 14-10-2018 AMBLS11_10780 a5d6c9c9dccde77f810e5324a8932fff 206 Pfam PF01810 LysE type translocator 17 201 1.9E-20 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMBLS11_06205 1f69ac8319090c80d8b8f83183cf470c 188 SUPERFAMILY SSF81342 6 183 6.43E-31 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMBLS11_06205 1f69ac8319090c80d8b8f83183cf470c 188 Pfam PF01292 Prokaryotic cytochrome b561 9 183 5.6E-27 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMBLS11_11465 f6f79da7036c1335b111bdb98c4c8283 162 Pfam PF02674 Colicin V production protein 4 141 4.1E-33 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AMBLS11_17855 d6e404fc43b89c3381b32221af522e87 247 Pfam PF07277 SapC 7 227 2.5E-68 T 14-10-2018 IPR010836 SapC AMBLS11_07285 f8f03e5ef16e6c14bf04ba49e4d997c6 208 Pfam PF02517 CAAX protease self-immunity 100 191 5.6E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMBLS11_08025 9593417dae0028dd6a1f8aa5e97d5e28 130 Pfam PF12514 Protein of unknown function (DUF3718) 32 100 6.8E-21 T 14-10-2018 IPR022193 Protein of unknown function DUF3718 AMBLS11_14655 224af2bf9ad1a5cdf282d3e0911f5e14 133 Pfam PF11026 Protein of unknown function (DUF2721) 6 118 9.1E-33 T 14-10-2018 IPR021279 Protein of unknown function DUF2721 AMBLS11_11115 6d290d1376ede24fcc2b0ac75f263e56 409 Pfam PF16153 Domain of unknown function (DUF4861) 73 407 1.5E-57 T 14-10-2018 IPR032342 Protein of unknown function DUF4861 AMBLS11_01360 4f1d13695248f2d59d4b80bf4b12f389 107 Pfam PF11666 Protein of unknown function (DUF2933) 18 68 7.7E-20 T 14-10-2018 IPR021682 Protein of unknown function DUF2933 AMBLS11_00650 406e543252f9b62efb991f6cdf8036d5 238 Pfam PF07386 Protein of unknown function (DUF1499) 96 231 1.8E-29 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 AMBLS11_02835 fb7fe0372cb38196c70376b918c1f9bb 146 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 9.2E-41 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 AMBLS11_07140 e88672e183e79499b2abe14c586907cf 429 Pfam PF06181 Urate oxidase N-terminal 4 296 6.6E-134 T 14-10-2018 IPR010389 Urate oxidase N-terminal AMBLS11_14785 02c4aa67899e620808287f0661a8c5f9 415 Pfam PF11449 Putative, 10TM heavy-metal exporter 59 414 7.1E-122 T 14-10-2018 IPR021552 Putative, 10TM heavy-metal exporter AMBLS11_03670 0f982ab3cf5342f3a3ebb03a0bf15ddd 144 Pfam PF06295 Protein of unknown function (DUF1043) 7 133 3.9E-22 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 AMBLS11_07295 1041fb451a8480f454666a9cb90810d2 397 Pfam PF11279 Protein of unknown function (DUF3080) 46 393 2.9E-85 T 14-10-2018 IPR021431 Protein of unknown function DUF3080 AMBLS11_11805 fab3647d1bfeb4e9b0700b8467257d83 302 Pfam PF01925 Sulfite exporter TauE/SafE 43 296 9.8E-37 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMBLS11_05825 c1e433a2d97b630b8141fad105fa142f 617 Pfam PF05960 Bacterial protein of unknown function (DUF885) 65 607 1.4E-180 T 14-10-2018 IPR010281 Protein of unknown function DUF885 AMBLS11_16095 05ee2b86dc968ea6c6ba1ff2d05a65f6 387 SUPERFAMILY SSF56935 26 387 1.57E-33 T 14-10-2018 AMBLS11_13240 181d4e956fef9d072033049fa8bc2938 85 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 1.3E-31 T 14-10-2018 IPR021432 Protein of unknown function DUF3081 AMBLS11_10375 e0539b0078c03c26076d1d9a4ec85b76 260 Pfam PF05742 Transport and Golgi organisation 2 1 245 1.5E-69 T 14-10-2018 IPR008551 Transport and Golgi organisation protein 2 AMBLS11_11635 b373bda318df0ff9d1a3345eace3fd1d 241 Pfam PF07273 Protein of unknown function (DUF1439) 30 131 6.0E-7 T 14-10-2018 IPR010835 Protein of unknown function DUF1439 AMBLS11_15690 7214ac7e78c5c5ad7a6fc533b047b7ad 131 Pfam PF04134 Protein of unknown function, DUF393 3 110 2.8E-26 T 14-10-2018 IPR007263 Protein of unknown function DUF393 AMBLS11_13020 eee83cae8d5673700b4593be838a1c43 222 Pfam PF06693 Protein of unknown function (DUF1190) 58 212 4.4E-47 T 14-10-2018 IPR009576 Biofilm formation YgiB AMBLS11_12995 be11a1845f49a53faacdff9403d21db4 129 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 12 128 2.8E-38 T 14-10-2018 IPR019231 Protein of unknown function DUF2170 AMBLS11_14955 5c7900b6aa6b94db638af976ab7076aa 530 Pfam PF14224 Domain of unknown function (DUF4331) 27 525 9.4E-140 T 14-10-2018 IPR025566 Protein of unknown function DUF4331