locus-tag	class	description
AMEC673_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AMEC673_00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMEC673_00020	COG0187	DNA topoisomerase II activity
AMEC673_00050	COG2818	Glycosylase
AMEC673_00060	COG3078	GTPase activator activity
AMEC673_00080	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMEC673_00080	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMEC673_00085	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AMEC673_00090	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AMEC673_00095	COG0569	domain protein
AMEC673_00100	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMEC673_00100	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMEC673_00120	COG0758	DNA mediated transformation
AMEC673_00135	COG0009	L-threonylcarbamoyladenylate synthase
AMEC673_00140	COG0408	coproporphyrinogen oxidase activity
AMEC673_00145	COG3047	cAMP biosynthetic process
AMEC673_00160	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AMEC673_00215	COG2234	aminopeptidase activity
AMEC673_00225	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMEC673_00250	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMEC673_00280	COG3642	lipopolysaccharide core region biosynthetic process
AMEC673_00310	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMEC673_00325	COG3161	chorismate lyase activity
AMEC673_00330	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AMEC673_00340	COG0210	DNA helicase
AMEC673_00360	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AMEC673_00445	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AMEC673_00470	COG0583	DNA-binding transcription factor activity
AMEC673_00480	COG3106	COG3106 Predicted ATPase
AMEC673_00495	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AMEC673_00510	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AMEC673_00515	COG0352	thiamine-phosphate diphosphorylase activity
AMEC673_00525	COG3071	HemY protein
AMEC673_00530	COG2959	enzyme of heme biosynthesis
AMEC673_00540	COG0181	hydroxymethylbilane synthase activity
AMEC673_00545	COG0745	RESPONSE REGULATOR receiver
AMEC673_00545	COG3706	GGDEF domain
AMEC673_00555	COG0194	GDP metabolic process
AMEC673_00565	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMEC673_00575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMEC673_00580	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AMEC673_00590	COG0678	peroxiredoxin activity
AMEC673_00605	COG1178	ABC-type Fe3 transport system permease component
AMEC673_00610	COG3842	ATPase activity
AMEC673_00615	COG2081	HI0933 family
AMEC673_00620	COG3047	cAMP biosynthetic process
AMEC673_00635	COG2200	EAL domain
AMEC673_00640	COG3706	GGDEF domain
AMEC673_00645	COG0583	DNA-binding transcription factor activity
AMEC673_00655	COG2076	Multidrug Resistance protein
AMEC673_00670	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMEC673_00685	COG0427	acetyl-CoA hydrolase
AMEC673_00690	COG0123	including yeast histone deacetylase and acetoin utilization protein
AMEC673_00705	COG0840	transmembrane signaling receptor activity
AMEC673_00715	COG3064	Membrane
AMEC673_00725	COG5001	Diguanylate cyclase
AMEC673_00725	COG5002	protein histidine kinase activity
AMEC673_00740	COG0514	ATP-dependent DNA helicase (RecQ)
AMEC673_00745	COG2050	protein possibly involved in aromatic compounds catabolism
AMEC673_00750	COG2239	Acts as a magnesium transporter
AMEC673_00755	COG2962	Rard protein
AMEC673_00760	COG3706	GGDEF domain
AMEC673_00765	COG0210	DNA helicase
AMEC673_00775	COG3706	GGDEF domain
AMEC673_00780	COG1011	Hydrolase
AMEC673_00795	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AMEC673_00800	COG0019	diaminopimelate decarboxylase activity
AMEC673_00835	COG0163	prenyltransferase activity
AMEC673_00840	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AMEC673_00850	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AMEC673_00885	COG1077	Cell shape determining protein MreB Mrl
AMEC673_00895	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AMEC673_00900	COG2814	Major facilitator Superfamily
AMEC673_00905	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMEC673_00925	COG3385	transposase activity
AMEC673_00945	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AMEC673_00955	COG0629	single-stranded DNA binding
AMEC673_00975	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMEC673_00990	COG1349	DNA-binding transcription factor activity
AMEC673_01035	COG3409	Peptidoglycan-binding domain 1 protein
AMEC673_01035	COG3267	Type II secretory pathway component ExeA
AMEC673_01045	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AMEC673_01050	COG1459	type II secretion system
AMEC673_01095	COG1077	Cell shape determining protein MreB Mrl
AMEC673_01100	COG1792	Involved in formation and maintenance of cell shape
AMEC673_01105	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AMEC673_01115	COG1530	ribonuclease E activity
AMEC673_01125	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AMEC673_01130	COG0312	modulator of DNA gyrase
AMEC673_01140	COG3028	Belongs to the UPF0307 family
AMEC673_01145	COG0312	modulator of DNA gyrase
AMEC673_01160	COG0745	RESPONSE REGULATOR receiver
AMEC673_01165	COG4191	Histidine kinase
AMEC673_01165	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMEC673_01170	COG0297	glycogen (starch) synthase activity
AMEC673_01180	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AMEC673_01190	COG1194	a g-specific adenine glycosylase
AMEC673_01235	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AMEC673_01240	COG0745	RESPONSE REGULATOR receiver
AMEC673_01245	COG0643	Histidine kinase
AMEC673_01245	COG2198	Histidine kinase
AMEC673_01250	COG0835	chemotaxis
AMEC673_01265	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AMEC673_01280	COG0745	RESPONSE REGULATOR receiver
AMEC673_01285	COG0643	Histidine kinase
AMEC673_01285	COG2198	Histidine kinase
AMEC673_01290	COG0835	chemotaxis
AMEC673_01310	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AMEC673_01360	COG0546	phosphoglycolate phosphatase activity
AMEC673_01370	COG2205	protein histidine kinase activity
AMEC673_01370	COG0784	Response regulator, receiver
AMEC673_01385	COG1609	Transcriptional regulator
AMEC673_01390	COG0673	inositol 2-dehydrogenase activity
AMEC673_01400	COG2211	Major facilitator Superfamily
AMEC673_01425	COG1454	alcohol dehydrogenase
AMEC673_01475	COG0089	rRNA binding
AMEC673_01485	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AMEC673_01495	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AMEC673_01510	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AMEC673_01520	COG1519	Transferase
AMEC673_01565	COG0788	formyltetrahydrofolate deformylase activity
AMEC673_01575	COG1643	Atp-dependent helicase
AMEC673_01585	COG2951	lytic endotransglycosylase activity
AMEC673_01590	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AMEC673_01605	COG2354	Protein conserved in bacteria
AMEC673_01615	COG4977	sequence-specific DNA binding
AMEC673_01630	COG0004	ammonium transporteR
AMEC673_01635	COG0405	Gamma-glutamyltransferase
AMEC673_01640	COG2837	iron assimilation
AMEC673_01655	COG0540	Belongs to the ATCase OTCase family
AMEC673_01680	COG5002	protein histidine kinase activity
AMEC673_01680	COG2205	protein histidine kinase activity
AMEC673_01680	COG0784	Response regulator, receiver
AMEC673_01695	COG5001	Diguanylate cyclase
AMEC673_01695	COG3300	MHYT domain
AMEC673_01705	COG1012	belongs to the aldehyde dehydrogenase family
AMEC673_01715	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AMEC673_01725	COG0512	Glutamine amidotransferase of anthranilate synthase
AMEC673_01730	COG0180	Tryptophanyl-tRNA synthetase
AMEC673_01735	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AMEC673_01755	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AMEC673_01765	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AMEC673_01800	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AMEC673_01805	COG0281	malic enzyme
AMEC673_01815	COG0625	glutathione transferase activity
AMEC673_01825	COG0753	catalase activity
AMEC673_01850	COG3300	MHYT domain
AMEC673_01850	COG5001	Diguanylate cyclase
AMEC673_01855	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AMEC673_01855	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AMEC673_01865	COG0137	argininosuccinate synthase activity
AMEC673_01890	COG1803	Methylglyoxal synthase
AMEC673_01900	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
AMEC673_01915	COG0745	RESPONSE REGULATOR receiver
AMEC673_01920	COG2205	protein histidine kinase activity
AMEC673_01925	COG2267	carboxylic ester hydrolase activity
AMEC673_01930	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AMEC673_01935	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMEC673_01940	COG0577	efflux transmembrane transporter activity
AMEC673_01940	COG1136	(ABC) transporter
AMEC673_01955	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AMEC673_01965	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AMEC673_01970	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMEC673_01975	COG4942	peptidase
AMEC673_01980	COG2861	carbohydrate metabolic process
AMEC673_01990	COG0584	glycerophosphoryl diester phosphodiesterase
AMEC673_02005	COG1162	GTPase activity
AMEC673_02010	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AMEC673_02035	COG0028	Belongs to the TPP enzyme family
AMEC673_02045	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMEC673_02050	COG1288	antiporter activity
AMEC673_02055	COG4206	TonB-dependent receptor
AMEC673_02075	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AMEC673_02080	COG0805	protein transport
AMEC673_02090	COG0084	hydrolase, TatD family'
AMEC673_02095	COG5001	Diguanylate cyclase
AMEC673_02095	COG4251	negative regulation of phosphorylation
AMEC673_02095	COG3706	GGDEF domain
AMEC673_02095	COG2203	Gaf domain
AMEC673_02105	COG0248	Ppx GppA phosphatase
AMEC673_02110	COG0513	Belongs to the DEAD box helicase family
AMEC673_02115	COG3118	belongs to the thioredoxin family
AMEC673_02120	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AMEC673_02135	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AMEC673_02140	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AMEC673_02145	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AMEC673_02155	COG0783	Belongs to the Dps family
AMEC673_02160	COG2133	pyrroloquinoline quinone binding
AMEC673_02165	COG0823	Involved in the tonB-independent uptake of proteins
AMEC673_02165	COG1506	peptidase
AMEC673_02165	COG4946	Tricorn protease homolog
AMEC673_02175	COG3118	belongs to the thioredoxin family
AMEC673_02190	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AMEC673_02200	COG1012	belongs to the aldehyde dehydrogenase family
AMEC673_02225	COG1757	Na H antiporter
AMEC673_02240	COG3876	Protein conserved in bacteria
AMEC673_02245	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AMEC673_02265	COG0346	lactoylglutathione lyase activity
AMEC673_02300	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMEC673_02310	COG2824	Alkylphosphonate utilization operon protein PhnA
AMEC673_02315	COG0454	-acetyltransferase
AMEC673_02325	COG1742	UPF0060 membrane protein
AMEC673_02390	COG0183	Belongs to the thiolase family
AMEC673_02395	COG1024	Enoyl-CoA hydratase
AMEC673_02395	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMEC673_02400	COG1196	nuclear chromosome segregation
AMEC673_02400	COG0739	heme binding
AMEC673_02400	COG0741	lytic transglycosylase activity
AMEC673_02405	COG0006	proline dipeptidase activity
AMEC673_02415	COG0142	geranyltranstransferase activity
AMEC673_02595	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AMEC673_02600	COG4942	peptidase
AMEC673_02600	COG1388	LysM domain
AMEC673_02605	COG1238	metal cluster binding
AMEC673_02615	COG0585	pseudouridine synthase activity
AMEC673_02620	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AMEC673_02630	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AMEC673_02640	COG0840	transmembrane signaling receptor activity
AMEC673_02650	COG0506	proline dehydrogenase activity
AMEC673_02650	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AMEC673_02650	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AMEC673_02665	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMEC673_02670	COG0745	RESPONSE REGULATOR receiver
AMEC673_02675	COG5002	protein histidine kinase activity
AMEC673_02700	COG0494	nUDIX hydrolase
AMEC673_02705	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
AMEC673_02710	COG0730	response to heat
AMEC673_02715	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMEC673_02720	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AMEC673_02730	COG3706	GGDEF domain
AMEC673_02735	COG2205	protein histidine kinase activity
AMEC673_02735	COG3850	Histidine kinase
AMEC673_02735	COG4999	Histidine kinase
AMEC673_02735	COG3437	response regulator, receiver
AMEC673_02740	COG2211	Major facilitator Superfamily
AMEC673_02760	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMEC673_02775	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AMEC673_02780	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMEC673_02800	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AMEC673_02800	COG1648	precorrin-2 dehydrogenase activity
AMEC673_02805	COG0513	Belongs to the DEAD box helicase family
AMEC673_02825	COG1538	Outer membrane efflux protein
AMEC673_02830	COG0494	nUDIX hydrolase
AMEC673_02840	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AMEC673_02845	COG3150	esterase
AMEC673_02850	COG0187	DNA topoisomerase II activity
AMEC673_02895	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMEC673_02915	COG1509	lysine 2,3-aminomutase activity
AMEC673_02945	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMEC673_02965	COG0271	Belongs to the BolA IbaG family
AMEC673_02980	COG3707	response regulator
AMEC673_02990	COG0659	secondary active sulfate transmembrane transporter activity
AMEC673_03000	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AMEC673_03005	COG2146	nitrite reductase [NAD(P)H] activity
AMEC673_03010	COG0243	molybdopterin cofactor binding
AMEC673_03015	COG1648	precorrin-2 dehydrogenase activity
AMEC673_03015	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AMEC673_03020	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AMEC673_03025	COG0737	Belongs to the 5'-nucleotidase family
AMEC673_03030	COG5001	Diguanylate cyclase
AMEC673_03030	COG2203	Gaf domain
AMEC673_03030	COG3706	GGDEF domain
AMEC673_03030	COG4251	negative regulation of phosphorylation
AMEC673_03040	COG1116	anion transmembrane transporter activity
AMEC673_03040	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AMEC673_03050	COG1116	anion transmembrane transporter activity
AMEC673_03065	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AMEC673_03070	COG4206	TonB-dependent receptor
AMEC673_03075	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AMEC673_03080	COG0348	domain, Protein
AMEC673_03095	COG1960	acyl-CoA dehydrogenase activity
AMEC673_03100	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_03110	COG4948	Mandelate Racemase Muconate Lactonizing
AMEC673_03125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMEC673_03130	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMEC673_03160	COG0358	DNA primase activity
AMEC673_03185	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AMEC673_03190	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AMEC673_03205	COG0537	adenosine 5'-monophosphoramidase activity
AMEC673_03220	COG3135	benzoate transporter
AMEC673_03225	COG1396	sequence-specific DNA binding
AMEC673_03230	COG2974	May be involved in recombination
AMEC673_03235	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMEC673_03235	COG4191	Histidine kinase
AMEC673_03240	COG0745	RESPONSE REGULATOR receiver
AMEC673_03245	COG5002	protein histidine kinase activity
AMEC673_03275	COG0811	peptide transport
AMEC673_03280	COG0811	peptide transport
AMEC673_03285	COG0848	biopolymer transport protein
AMEC673_03290	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AMEC673_03300	COG3437	response regulator, receiver
AMEC673_03310	COG0318	PFAM AMP-dependent synthetase and ligase
AMEC673_03320	COG2133	pyrroloquinoline quinone binding
AMEC673_03325	COG1049	propionate catabolic process, 2-methylcitrate cycle
AMEC673_03360	COG0527	aspartate kinase activity
AMEC673_03385	COG2967	ApaG domain
AMEC673_03395	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AMEC673_03400	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMEC673_03405	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AMEC673_03410	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AMEC673_03420	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AMEC673_03425	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AMEC673_03440	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AMEC673_03455	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMEC673_03460	COG3956	TIGRFAM MazG family protein
AMEC673_03485	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_03495	COG0318	PFAM AMP-dependent synthetase and ligase
AMEC673_03505	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMEC673_03535	COG0642	Histidine kinase
AMEC673_03540	COG0745	RESPONSE REGULATOR receiver
AMEC673_03555	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AMEC673_03560	COG0723	plastoquinol--plastocyanin reductase activity
AMEC673_03565	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AMEC673_03570	COG2857	Cytochrome c1
AMEC673_03575	COG0625	glutathione transferase activity
AMEC673_03580	COG2969	positive regulation of protein catabolic process
AMEC673_03595	COG0745	RESPONSE REGULATOR receiver
AMEC673_03600	COG2239	Acts as a magnesium transporter
AMEC673_03605	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMEC673_03615	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMEC673_03625	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AMEC673_03630	COG1137	ATPase activity
AMEC673_03635	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AMEC673_03645	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AMEC673_03660	COG1127	ABC transporter
AMEC673_03665	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AMEC673_03670	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AMEC673_03675	COG2854	intermembrane phospholipid transfer
AMEC673_03685	COG5007	Belongs to the BolA IbaG family
AMEC673_03695	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMEC673_03700	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMEC673_03710	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AMEC673_03740	COG2308	Evidence 4 Homologs of previously reported genes of
AMEC673_03745	COG1305	Transglutaminase-like
AMEC673_03765	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AMEC673_03775	COG4771	TonB-dependent receptor
AMEC673_03780	COG0697	spore germination
AMEC673_03790	COG2205	protein histidine kinase activity
AMEC673_03790	COG0784	Response regulator, receiver
AMEC673_03815	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AMEC673_03825	COG0126	phosphoglycerate kinase activity
AMEC673_03830	COG3588	fructose-bisphosphate aldolase
AMEC673_03835	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AMEC673_03845	COG0745	RESPONSE REGULATOR receiver
AMEC673_03850	COG5002	protein histidine kinase activity
AMEC673_03870	COG1538	Outer membrane efflux protein
AMEC673_03880	COG0823	Involved in the tonB-independent uptake of proteins
AMEC673_03880	COG1506	peptidase
AMEC673_03880	COG4946	Tricorn protease homolog
AMEC673_03885	COG0248	Ppx GppA phosphatase
AMEC673_03890	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AMEC673_03900	COG0573	inorganic phosphate transmembrane transporter activity
AMEC673_03910	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AMEC673_03920	COG0306	phosphate transporter
AMEC673_03930	COG0583	DNA-binding transcription factor activity
AMEC673_03955	COG1272	protein, Hemolysin III
AMEC673_03965	COG1846	Transcriptional regulator
AMEC673_03970	COG1764	response to oxidative stress
AMEC673_03985	COG1739	Uncharacterized protein family UPF0029
AMEC673_04005	COG0583	DNA-binding transcription factor activity
AMEC673_04010	COG4989	oxidoreductase activity
AMEC673_04025	COG0420	3'-5' exonuclease activity
AMEC673_04030	COG0419	ATPase involved in DNA repair
AMEC673_04050	COG0463	Glycosyl transferase, family 2
AMEC673_04055	COG0745	RESPONSE REGULATOR receiver
AMEC673_04060	COG3850	Histidine kinase
AMEC673_04060	COG5002	protein histidine kinase activity
AMEC673_04065	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
AMEC673_04080	COG2188	Transcriptional regulator
AMEC673_04090	COG2986	histidine ammonia-lyase
AMEC673_04105	COG2971	BadF BadG BcrA BcrD
AMEC673_04110	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMEC673_04120	COG0488	(ABC) transporter
AMEC673_04150	COG0668	transmembrane transport
AMEC673_04155	COG3866	Pectate lyase
AMEC673_04240	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AMEC673_04245	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AMEC673_04250	COG0513	Belongs to the DEAD box helicase family
AMEC673_04270	COG3409	Peptidoglycan-binding domain 1 protein
AMEC673_04270	COG3267	Type II secretory pathway component ExeA
AMEC673_04295	COG0473	3-isopropylmalate dehydrogenase activity
AMEC673_04300	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMEC673_04320	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AMEC673_04335	COG4555	ABC transporter
AMEC673_04340	COG1668	transmembrane transport
AMEC673_04360	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMEC673_04365	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMEC673_04370	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMEC673_04380	COG1138	Cytochrome C-type biogenesis protein
AMEC673_04400	COG2853	Lipoprotein
AMEC673_04405	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AMEC673_04415	COG3104	oligopeptide transport
AMEC673_04445	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMEC673_04460	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AMEC673_04465	COG1596	polysaccharide export
AMEC673_04465	COG1555	photosystem II stabilization
AMEC673_04470	COG0473	3-isopropylmalate dehydrogenase activity
AMEC673_04485	COG1611	Belongs to the LOG family
AMEC673_04490	COG0745	RESPONSE REGULATOR receiver
AMEC673_04490	COG3706	GGDEF domain
AMEC673_04535	COG0564	pseudouridine synthase activity
AMEC673_04550	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AMEC673_04555	COG0024	Methionine aminopeptidase
AMEC673_04560	COG0052	Belongs to the universal ribosomal protein uS2 family
AMEC673_04570	COG0528	UMP kinase activity
AMEC673_04580	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMEC673_04585	COG0575	Belongs to the CDS family
AMEC673_04595	COG0750	zinc metalloprotease
AMEC673_04610	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AMEC673_04630	COG0587	DNA-directed DNA polymerase activity
AMEC673_04635	COG0825	malonyl-CoA metabolic process
AMEC673_04640	COG0037	tRNA processing
AMEC673_04660	COG0590	tRNA wobble adenosine to inosine editing
AMEC673_04675	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMEC673_04675	COG0047	phosphoribosylformylglycinamidine synthase activity
AMEC673_04680	COG2840	Smr protein MutS2
AMEC673_04705	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMEC673_04710	COG2197	response regulator
AMEC673_04750	COG0835	chemotaxis
AMEC673_04750	COG0784	Response regulator, receiver
AMEC673_04755	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AMEC673_04760	COG1815	bacterial-type flagellum-dependent cell motility
AMEC673_04765	COG1558	bacterial-type flagellum-dependent cell motility
AMEC673_04770	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AMEC673_04775	COG1749	Flagellar hook protein flgE
AMEC673_04780	COG4787	bacterial-type flagellum-dependent cell motility
AMEC673_04785	COG4786	Flagellar basal body rod
AMEC673_04800	COG1705	Flagellar rod assembly protein muramidase FlgJ
AMEC673_04800	COG3951	Flagellar rod assembly protein muramidase FlgJ
AMEC673_04805	COG1256	bacterial-type flagellum assembly
AMEC673_04825	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AMEC673_04830	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AMEC673_04860	COG1083	cytidylyl-transferase
AMEC673_04880	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMEC673_04885	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMEC673_04890	COG2089	acid synthase
AMEC673_04895	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AMEC673_04900	COG1086	Polysaccharide biosynthesis protein
AMEC673_04910	COG2204	response regulator
AMEC673_04915	COG3852	Histidine kinase
AMEC673_04920	COG2204	response regulator
AMEC673_04925	COG1677	Flagellar hook-basal body complex protein FliE
AMEC673_04930	COG1766	The M ring may be actively involved in energy transduction
AMEC673_04935	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AMEC673_04985	COG1987	bacterial-type flagellum assembly
AMEC673_05005	COG2989	Protein conserved in bacteria
AMEC673_05010	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AMEC673_05020	COG0455	bacterial-type flagellum organization
AMEC673_05035	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
AMEC673_05040	COG2198	Histidine kinase
AMEC673_05040	COG0643	Histidine kinase
AMEC673_05050	COG1192	Involved in chromosome partitioning
AMEC673_05060	COG0835	chemotaxis
AMEC673_05075	COG1410	methionine synthase
AMEC673_05075	COG0646	methionine synthase
AMEC673_05080	COG0646	methionine synthase
AMEC673_05080	COG1410	methionine synthase
AMEC673_05090	COG3123	guanosine phosphorylase activity
AMEC673_05100	COG0583	DNA-binding transcription factor activity
AMEC673_05105	COG0583	DNA-binding transcription factor activity
AMEC673_05110	COG0288	reversible hydration of carbon dioxide
AMEC673_05115	COG0659	secondary active sulfate transmembrane transporter activity
AMEC673_05125	COG1309	transcriptional regulator
AMEC673_05130	COG3590	peptidase
AMEC673_05140	COG2137	regulation of response to DNA damage stimulus
AMEC673_05145	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMEC673_05155	COG1607	acyl-coa hydrolase
AMEC673_05165	COG5016	pyruvate
AMEC673_05165	COG0511	ligase activity, forming carbon-carbon bonds
AMEC673_05170	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
AMEC673_05175	COG4172	Belongs to the ABC transporter superfamily
AMEC673_05185	COG4171	peptide transport system, permease
AMEC673_05190	COG4168	peptide transport system, permease
AMEC673_05195	COG0747	negative chemotaxis
AMEC673_05200	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AMEC673_05205	COG1842	Phage shock protein A
AMEC673_05235	COG0625	glutathione transferase activity
AMEC673_05240	COG1522	sequence-specific DNA binding
AMEC673_05245	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AMEC673_05300	COG0811	peptide transport
AMEC673_05305	COG0811	peptide transport
AMEC673_05310	COG0848	biopolymer transport protein
AMEC673_05325	COG1444	tRNA N-acetyltransferase activity
AMEC673_05360	COG0456	acetyltransferase
AMEC673_05375	COG0583	DNA-binding transcription factor activity
AMEC673_05380	COG2814	Major facilitator Superfamily
AMEC673_05385	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMEC673_05390	COG0656	L-ascorbic acid biosynthetic process
AMEC673_05410	COG1846	Transcriptional regulator
AMEC673_05420	COG3275	phosphorelay sensor kinase activity
AMEC673_05425	COG1966	Carbon starvation protein
AMEC673_05445	COG0457	Tetratricopeptide repeat
AMEC673_05460	COG2197	response regulator
AMEC673_05470	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMEC673_05480	COG3706	GGDEF domain
AMEC673_05500	COG0583	DNA-binding transcription factor activity
AMEC673_05505	COG0702	epimerase
AMEC673_05525	COG1902	pentaerythritol trinitrate reductase activity
AMEC673_05535	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMEC673_05540	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AMEC673_05545	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AMEC673_05550	COG0564	pseudouridine synthase activity
AMEC673_05560	COG0612	Peptidase, M16
AMEC673_05565	COG2918	glutathione biosynthetic process
AMEC673_05590	COG2840	Smr protein MutS2
AMEC673_05595	COG2890	protein-(glutamine-N5) methyltransferase activity
AMEC673_05610	COG2719	SpoVR family
AMEC673_05615	COG2718	Belongs to the UPF0229 family
AMEC673_05620	COG2766	serine protein kinase
AMEC673_05630	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AMEC673_05635	COG4771	TonB-dependent receptor
AMEC673_05660	COG0450	alkyl hydroperoxide reductase
AMEC673_05665	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AMEC673_05670	COG2885	chlorophyll binding
AMEC673_05675	COG0584	glycerophosphoryl diester phosphodiesterase
AMEC673_05680	COG0346	lactoylglutathione lyase activity
AMEC673_05685	COG4221	oxidoreductase activity
AMEC673_05690	COG1278	Cold shock
AMEC673_05705	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AMEC673_05710	COG4660	Part of a membrane complex involved in electron transport
AMEC673_05715	COG4659	FMN binding
AMEC673_05720	COG4658	electron transport chain
AMEC673_05725	COG4656	Part of a membrane complex involved in electron transport
AMEC673_05730	COG2878	Part of a membrane complex involved in electron transport
AMEC673_05740	COG0534	Mate efflux family protein
AMEC673_05745	COG0556	nucleotide-excision repair
AMEC673_05760	COG0602	queuosine metabolic process
AMEC673_05770	COG0367	asparagine synthase
AMEC673_05790	COG3273	potassium ion transport
AMEC673_05790	COG0471	metal ion transport
AMEC673_05805	COG0529	Catalyzes the synthesis of activated sulfate
AMEC673_05810	COG0175	sulfate reduction
AMEC673_05815	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMEC673_05820	COG3706	GGDEF domain
AMEC673_05820	COG0745	RESPONSE REGULATOR receiver
AMEC673_05845	COG2304	oxidoreductase activity
AMEC673_05865	COG0714	Associated with various cellular activities
AMEC673_05875	COG1024	Enoyl-CoA hydratase
AMEC673_05875	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMEC673_05890	COG1025	Belongs to the peptidase M16 family
AMEC673_05895	COG2062	phosphohistidine phosphatase, SixA
AMEC673_05905	COG4536	flavin adenine dinucleotide binding
AMEC673_05910	COG4137	Cytochrome C assembly protein
AMEC673_05915	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AMEC673_05955	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMEC673_05960	COG1132	(ABC) transporter
AMEC673_05975	COG0228	four-way junction DNA binding
AMEC673_05980	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMEC673_05985	COG0336	Belongs to the RNA methyltransferase TrmD family
AMEC673_05990	COG0335	large ribosomal subunit rRNA binding
AMEC673_05995	COG2860	membrane
AMEC673_06005	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AMEC673_06010	COG1605	Chorismate mutase
AMEC673_06010	COG0287	Prephenate dehydrogenase
AMEC673_06040	COG0077	Prephenate dehydratase
AMEC673_06040	COG1605	Chorismate mutase
AMEC673_06045	COG0745	RESPONSE REGULATOR receiver
AMEC673_06050	COG0023	Translation Initiation Factor
AMEC673_06080	COG2205	protein histidine kinase activity
AMEC673_06090	COG2204	response regulator
AMEC673_06105	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AMEC673_06110	COG0494	nUDIX hydrolase
AMEC673_06115	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AMEC673_06125	COG2255	four-way junction helicase activity
AMEC673_06130	COG0824	Thioesterase
AMEC673_06135	COG0811	peptide transport
AMEC673_06150	COG0823	Involved in the tonB-independent uptake of proteins
AMEC673_06155	COG2885	chlorophyll binding
AMEC673_06160	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AMEC673_06165	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AMEC673_06175	COG4667	esterase of the alpha-beta hydrolase superfamily
AMEC673_06180	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AMEC673_06190	COG2205	protein histidine kinase activity
AMEC673_06190	COG0784	Response regulator, receiver
AMEC673_06205	COG3038	cytochrome b561
AMEC673_06225	COG1451	nucleotide metabolic process
AMEC673_06235	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMEC673_06245	COG1309	transcriptional regulator
AMEC673_06250	COG4774	siderophore transport
AMEC673_06275	COG3706	GGDEF domain
AMEC673_06285	COG3008	intermembrane lipid transfer
AMEC673_06285	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AMEC673_06290	COG2995	paraquat-inducible protein a
AMEC673_06300	COG0017	Asparaginyl-tRNA synthetase
AMEC673_06315	COG0189	ligase activity
AMEC673_06350	COG2226	methyltransferase
AMEC673_06365	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMEC673_06370	COG4139	cobalamin transport
AMEC673_06380	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
AMEC673_06385	COG2205	protein histidine kinase activity
AMEC673_06390	COG0745	RESPONSE REGULATOR receiver
AMEC673_06395	COG0569	domain protein
AMEC673_06400	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AMEC673_06415	COG5265	(ABC) transporter
AMEC673_06420	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMEC673_06430	COG0745	RESPONSE REGULATOR receiver
AMEC673_06435	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMEC673_06455	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMEC673_06470	COG4181	ATPase activity
AMEC673_06475	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AMEC673_06480	COG1090	epimerase
AMEC673_06485	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AMEC673_06490	COG0628	permease
AMEC673_06500	COG0745	RESPONSE REGULATOR receiver
AMEC673_06515	COG2350	Protein conserved in bacteria
AMEC673_06520	COG0159	tryptophan synthase activity
AMEC673_06530	COG0134	indole-3-glycerol-phosphate synthase activity
AMEC673_06530	COG0135	phosphoribosylanthranilate isomerase activity
AMEC673_06535	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AMEC673_06545	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AMEC673_06550	COG0613	PHP domain protein
AMEC673_06555	COG0009	L-threonylcarbamoyladenylate synthase
AMEC673_06565	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AMEC673_06575	COG0656	L-ascorbic acid biosynthetic process
AMEC673_06580	COG0110	maltose O-acetyltransferase activity
AMEC673_06595	COG2733	membrane
AMEC673_06600	COG0500	methyltransferase
AMEC673_06605	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMEC673_06610	COG0497	DNA recombination
AMEC673_06615	COG0783	Belongs to the Dps family
AMEC673_06630	COG1454	alcohol dehydrogenase
AMEC673_06635	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_06645	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AMEC673_06650	COG2610	gluconate transmembrane transporter activity
AMEC673_06655	COG4771	TonB-dependent receptor
AMEC673_06670	COG0784	Response regulator, receiver
AMEC673_06670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMEC673_06670	COG2198	Histidine kinase
AMEC673_06670	COG2205	protein histidine kinase activity
AMEC673_06680	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMEC673_06690	COG0484	heat shock protein binding
AMEC673_06695	COG3909	cytochrome
AMEC673_06705	COG2200	EAL domain
AMEC673_06705	COG2202	Pas domain
AMEC673_06705	COG2199	diguanylate cyclase activity
AMEC673_06720	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AMEC673_06730	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AMEC673_06735	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMEC673_06765	COG0071	Belongs to the small heat shock protein (HSP20) family
AMEC673_06770	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMEC673_06775	COG0280	phosphate acetyltransferase
AMEC673_06775	COG0857	belongs to the CobB CobQ family
AMEC673_06780	COG1228	amidohydrolase
AMEC673_06785	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AMEC673_06790	COG4535	Mg2 and Co2 transporter CorC
AMEC673_06800	COG1702	phosphate starvation-inducible protein PhoH
AMEC673_06810	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMEC673_06855	COG1607	acyl-coa hydrolase
AMEC673_06860	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AMEC673_06870	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_06880	COG1115	amino acid carrier protein
AMEC673_06890	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMEC673_06895	COG0012	GTP binding
AMEC673_06910	COG1064	alcohol dehydrogenase
AMEC673_06920	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMEC673_06925	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AMEC673_06930	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AMEC673_06935	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AMEC673_06945	COG2890	protein-(glutamine-N5) methyltransferase activity
AMEC673_06950	COG0784	Response regulator, receiver
AMEC673_06950	COG3437	response regulator, receiver
AMEC673_06955	COG3094	Invasion gene expression up-regulator, SirB
AMEC673_06970	COG0583	DNA-binding transcription factor activity
AMEC673_06980	COG2363	Small membrane protein
AMEC673_06995	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
AMEC673_07000	COG0515	serine threonine protein kinase
AMEC673_07005	COG2116	formate transmembrane transporter activity
AMEC673_07020	COG0714	Associated with various cellular activities
AMEC673_07030	COG0033	Phosphoglucomutase
AMEC673_07035	COG0058	SHG alpha-glucan phosphorylase activity
AMEC673_07045	COG2988	succinylglutamate desuccinylase activity
AMEC673_07060	COG1301	dicarboxylic acid transport
AMEC673_07080	COG1393	Belongs to the ArsC family
AMEC673_07105	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
AMEC673_07120	COG5001	Diguanylate cyclase
AMEC673_07120	COG3300	MHYT domain
AMEC673_07135	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMEC673_07150	COG2249	NAD(P)H dehydrogenase (quinone) activity
AMEC673_07175	COG1733	regulation of RNA biosynthetic process
AMEC673_07185	COG5001	Diguanylate cyclase
AMEC673_07185	COG5002	protein histidine kinase activity
AMEC673_07185	COG3447	MASE1 domain protein
AMEC673_07195	COG0402	S-adenosylhomocysteine deaminase activity
AMEC673_07200	COG2351	hydroxyisourate hydrolase activity
AMEC673_07215	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMEC673_07225	COG1309	transcriptional regulator
AMEC673_07240	COG2252	PERMEase
AMEC673_07245	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMEC673_07260	COG0745	RESPONSE REGULATOR receiver
AMEC673_07260	COG3706	GGDEF domain
AMEC673_07265	COG0784	Response regulator, receiver
AMEC673_07265	COG2205	protein histidine kinase activity
AMEC673_07280	COG2233	PERMEase
AMEC673_07285	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMEC673_07300	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AMEC673_07305	COG0730	response to heat
AMEC673_07315	COG0154	amidase activity
AMEC673_07350	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_07365	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AMEC673_07385	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AMEC673_07395	COG1596	polysaccharide export
AMEC673_07400	COG0489	protein tyrosine kinase activity
AMEC673_07405	COG4464	protein tyrosine phosphatase activity
AMEC673_07440	COG0438	transferase activity, transferring glycosyl groups
AMEC673_07480	COG2327	Polysaccharide pyruvyl transferase
AMEC673_07490	COG0438	transferase activity, transferring glycosyl groups
AMEC673_07505	COG1215	transferase activity, transferring glycosyl groups
AMEC673_07525	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMEC673_07525	COG0072	phenylalanine-tRNA ligase activity
AMEC673_07550	COG1472	Belongs to the glycosyl hydrolase 3 family
AMEC673_07555	COG2096	Adenosyltransferase
AMEC673_07565	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AMEC673_07575	COG4591	ABC-type transport system involved in lipoprotein release permease component
AMEC673_07600	COG0708	Exodeoxyribonuclease III
AMEC673_07635	COG2814	Major facilitator Superfamily
AMEC673_07675	COG1024	Enoyl-CoA hydratase
AMEC673_07680	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AMEC673_07685	COG1960	acyl-CoA dehydrogenase activity
AMEC673_07690	COG0789	Transcriptional regulator
AMEC673_07695	COG0183	Belongs to the thiolase family
AMEC673_07720	COG2925	Exonuclease
AMEC673_07725	COG5002	protein histidine kinase activity
AMEC673_07725	COG2205	protein histidine kinase activity
AMEC673_07725	COG0784	Response regulator, receiver
AMEC673_07805	COG1643	Atp-dependent helicase
AMEC673_07825	COG3321	synthase
AMEC673_07825	COG0604	alcohol dehydrogenase
AMEC673_07830	COG0328	RNA-DNA hybrid ribonuclease activity
AMEC673_07835	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AMEC673_07845	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AMEC673_07850	COG1136	(ABC) transporter
AMEC673_07855	COG4591	ABC-type transport system involved in lipoprotein release permease component
AMEC673_07860	COG1301	dicarboxylic acid transport
AMEC673_07870	COG3724	N-succinylarginine dihydrolase activity
AMEC673_07875	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMEC673_07880	COG3122	Protein conserved in bacteria
AMEC673_07890	COG0583	DNA-binding transcription factor activity
AMEC673_07895	COG0746	molybdenum cofactor guanylyltransferase activity
AMEC673_07900	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AMEC673_07905	COG0243	molybdopterin cofactor binding
AMEC673_07915	COG0625	glutathione transferase activity
AMEC673_07930	COG2153	protein acetylation
AMEC673_07945	COG5002	protein histidine kinase activity
AMEC673_07955	COG1530	ribonuclease E activity
AMEC673_07960	COG0564	pseudouridine synthase activity
AMEC673_07965	COG0546	phosphoglycolate phosphatase activity
AMEC673_07970	COG0424	maF-like protein
AMEC673_07975	COG1399	metal-binding, possibly nucleic acid-binding protein
AMEC673_07985	COG0416	fatty acid biosynthetic process
AMEC673_07990	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMEC673_07995	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AMEC673_08005	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMEC673_08010	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMEC673_08015	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AMEC673_08020	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AMEC673_08035	COG0084	hydrolase, TatD family'
AMEC673_08040	COG0259	pyridoxamine-phosphate oxidase activity
AMEC673_08045	COG0702	epimerase
AMEC673_08050	COG3706	GGDEF domain
AMEC673_08075	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_08080	COG0596	Alpha beta hydrolase
AMEC673_08085	COG1024	Enoyl-CoA hydratase
AMEC673_08085	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMEC673_08090	COG0183	Belongs to the thiolase family
AMEC673_08095	COG1960	acyl-CoA dehydrogenase activity
AMEC673_08100	COG0596	Alpha beta hydrolase
AMEC673_08115	COG2390	Transcriptional regulator
AMEC673_08120	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMEC673_08130	COG0246	Mannitol dehydrogenase
AMEC673_08145	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AMEC673_08150	COG0523	cobalamin synthesis protein
AMEC673_08155	COG0247	lactate metabolic process
AMEC673_08155	COG0277	FAD linked oxidase domain protein
AMEC673_08180	COG0668	transmembrane transport
AMEC673_08185	COG4771	TonB-dependent receptor
AMEC673_08195	COG0784	Response regulator, receiver
AMEC673_08195	COG2198	Histidine kinase
AMEC673_08195	COG2205	protein histidine kinase activity
AMEC673_08200	COG3437	response regulator, receiver
AMEC673_08210	COG0195	Participates in both transcription termination and antitermination
AMEC673_08225	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMEC673_08245	COG1187	pseudouridine synthase activity
AMEC673_08255	COG3153	acetyltransferase
AMEC673_08255	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AMEC673_08285	COG0450	alkyl hydroperoxide reductase
AMEC673_08330	COG1032	radical SAM domain protein
AMEC673_08345	COG4771	TonB-dependent receptor
AMEC673_08350	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMEC673_08360	COG4134	Bacterial extracellular solute-binding protein
AMEC673_08370	COG4136	ATPase activity
AMEC673_08375	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMEC673_08415	COG0583	DNA-binding transcription factor activity
AMEC673_08440	COG1131	(ABC) transporter
AMEC673_08445	COG1902	pentaerythritol trinitrate reductase activity
AMEC673_08455	COG2867	negative regulation of translational initiation
AMEC673_08460	COG2914	Belongs to the UPF0125 (RnfH) family
AMEC673_08470	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AMEC673_08475	COG4771	TonB-dependent receptor
AMEC673_08480	COG0457	Tetratricopeptide repeat
AMEC673_08505	COG0574	Belongs to the PEP-utilizing enzyme family
AMEC673_08505	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMEC673_08540	COG2850	peptidyl-arginine hydroxylation
AMEC673_08550	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AMEC673_08555	COG2915	High frequency lysogenization protein hflD homolog
AMEC673_08560	COG0482	sulfurtransferase activity
AMEC673_08565	COG1187	pseudouridine synthase activity
AMEC673_08575	COG1278	Cold shock
AMEC673_08580	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AMEC673_08585	COG0542	response to heat
AMEC673_08590	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMEC673_08595	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
AMEC673_08600	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AMEC673_08605	COG0492	ferredoxin-NADP+ reductase activity
AMEC673_08610	COG3092	negative regulation of chromosome organization
AMEC673_08615	COG0616	signal peptide processing
AMEC673_08630	COG0778	Nitroreductase
AMEC673_08640	COG0252	asparaginase activity
AMEC673_08645	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AMEC673_08650	COG0321	lipoyl(octanoyl) transferase activity
AMEC673_08655	COG2921	Belongs to the UPF0250 family
AMEC673_08660	COG1686	Belongs to the peptidase S11 family
AMEC673_08665	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AMEC673_08670	COG0772	Belongs to the SEDS family
AMEC673_08675	COG0768	penicillin binding
AMEC673_08680	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AMEC673_08685	COG0799	negative regulation of ribosome biogenesis
AMEC673_08695	COG1466	dna polymerase III delta subunit
AMEC673_08700	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
AMEC673_08705	COG0495	leucyl-tRNA aminoacylation
AMEC673_08715	COG1067	ATP-dependent peptidase activity
AMEC673_08730	COG2801	Transposase and inactivated derivatives
AMEC673_08735	COG2963	transposase activity
AMEC673_08745	COG1534	Rna-binding protein
AMEC673_08750	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AMEC673_08755	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMEC673_08760	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AMEC673_08765	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMEC673_08770	COG0149	triose-phosphate isomerase activity
AMEC673_08775	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AMEC673_08850	COG4387	Mu-like prophage protein GP36
AMEC673_08860	COG4397	Mu-like prophage major head subunit gpT
AMEC673_08865	COG4388	Caudovirus prohead serine protease
AMEC673_08890	COG4383	Mu-like prophage protein gp29
AMEC673_08895	COG4373	Mu-like prophage FluMu protein gp28
AMEC673_09000	COG3423	Transcriptional regulator
AMEC673_09030	COG1803	Methylglyoxal synthase
AMEC673_09030	COG1597	lipid kinase activity
AMEC673_09040	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_09045	COG0561	phosphatase activity
AMEC673_09060	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMEC673_09085	COG1185	polyribonucleotide nucleotidyltransferase activity
AMEC673_09300	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
AMEC673_09305	COG1196	nuclear chromosome segregation
AMEC673_09315	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMEC673_09330	COG1132	(ABC) transporter
AMEC673_09335	COG1663	tetraacyldisaccharide 4'-kinase activity
AMEC673_09375	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AMEC673_09380	COG0435	Glutathione S-transferase
AMEC673_09385	COG1741	Belongs to the pirin family
AMEC673_09410	COG0372	Belongs to the citrate synthase family
AMEC673_09415	COG2009	succinate dehydrogenase
AMEC673_09420	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AMEC673_09425	COG1053	succinate dehydrogenase
AMEC673_09430	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AMEC673_09435	COG0567	Dehydrogenase, E1 component
AMEC673_09440	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMEC673_09475	COG4667	esterase of the alpha-beta hydrolase superfamily
AMEC673_09495	COG0366	Alpha amylase catalytic
AMEC673_09510	COG1609	Transcriptional regulator
AMEC673_09520	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_09525	COG2267	carboxylic ester hydrolase activity
AMEC673_09535	COG0616	signal peptide processing
AMEC673_09550	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AMEC673_09555	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMEC673_09560	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMEC673_09565	COG0386	Belongs to the glutathione peroxidase family
AMEC673_09570	COG2084	Dehydrogenase
AMEC673_09580	COG1960	acyl-CoA dehydrogenase activity
AMEC673_09585	COG1024	Enoyl-CoA hydratase
AMEC673_09590	COG2226	methyltransferase
AMEC673_09595	COG3083	sulfuric ester hydrolase activity
AMEC673_09600	COG3082	Protein of unknown function (DUF1414)
AMEC673_09605	COG3081	Nucleoid-associated protein
AMEC673_09615	COG1196	nuclear chromosome segregation
AMEC673_09615	COG0739	heme binding
AMEC673_09615	COG0741	lytic transglycosylase activity
AMEC673_09635	COG3275	phosphorelay sensor kinase activity
AMEC673_09640	COG3279	Response regulator of the LytR AlgR family
AMEC673_09645	COG0205	6-phosphofructokinase activity
AMEC673_09660	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMEC673_09660	COG2205	protein histidine kinase activity
AMEC673_09695	COG4221	oxidoreductase activity
AMEC673_09700	COG0583	DNA-binding transcription factor activity
AMEC673_09710	COG0513	Belongs to the DEAD box helicase family
AMEC673_09720	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AMEC673_09725	COG0583	DNA-binding transcription factor activity
AMEC673_09745	COG1760	l-serine dehydratase
AMEC673_09765	COG1322	Protein conserved in bacteria
AMEC673_09770	COG1404	Belongs to the peptidase S8 family
AMEC673_09775	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AMEC673_09780	COG0022	dehydrogenase e1 component
AMEC673_09790	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AMEC673_09795	COG0515	serine threonine protein kinase
AMEC673_09800	COG1946	Acyl-CoA thioesterase
AMEC673_09810	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AMEC673_09820	COG1956	GAF domain-containing protein
AMEC673_09835	COG0793	Belongs to the peptidase S41A family
AMEC673_09840	COG0733	neurotransmitter:sodium symporter activity
AMEC673_09850	COG0308	aminopeptidase N
AMEC673_09885	COG0167	dihydroorotate dehydrogenase activity
AMEC673_09910	COG3130	regulation of translation
AMEC673_09915	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AMEC673_09925	COG0415	Belongs to the DNA photolyase family
AMEC673_09930	COG0415	Belongs to the DNA photolyase family
AMEC673_09935	COG0415	Belongs to the DNA photolyase family
AMEC673_09940	COG3046	protein related to deoxyribodipyrimidine photolyase
AMEC673_09965	COG0318	PFAM AMP-dependent synthetase and ligase
AMEC673_09975	COG1082	Xylose isomerase domain protein TIM barrel
AMEC673_10025	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AMEC673_10030	COG0589	response to stress
AMEC673_10040	COG0069	glutamate synthase activity
AMEC673_10055	COG2193	ferroxidase activity
AMEC673_10065	COG3278	Belongs to the heme-copper respiratory oxidase family
AMEC673_10080	COG2010	Cytochrome c
AMEC673_10105	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AMEC673_10110	COG0589	response to stress
AMEC673_10120	COG1752	Esterase of the alpha-beta hydrolase superfamily
AMEC673_10140	COG1280	lysine exporter protein (LysE YggA)
AMEC673_10145	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AMEC673_10150	COG2897	thiosulfate sulfurtransferase activity
AMEC673_10155	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AMEC673_10200	COG0582	viral genome integration into host DNA
AMEC673_10205	COG2003	Belongs to the UPF0758 family
AMEC673_10210	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMEC673_10230	COG0582	viral genome integration into host DNA
AMEC673_10235	COG0582	viral genome integration into host DNA
AMEC673_10245	COG0322	excinuclease ABC activity
AMEC673_10250	COG2197	response regulator
AMEC673_10255	COG1741	Belongs to the pirin family
AMEC673_10265	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AMEC673_10275	COG3384	dioxygenase
AMEC673_10280	COG2259	Doxx family
AMEC673_10285	COG0583	DNA-binding transcription factor activity
AMEC673_10295	COG0670	Belongs to the BI1 family
AMEC673_10300	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AMEC673_10315	COG2920	part of a sulfur-relay system
AMEC673_10345	COG4771	TonB-dependent receptor
AMEC673_10360	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AMEC673_10365	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AMEC673_10370	COG0531	amino acid
AMEC673_10370	COG1674	ftsk spoiiie
AMEC673_10380	COG0686	Belongs to the AlaDH PNT family
AMEC673_10385	COG0284	orotidine-5'-phosphate decarboxylase activity
AMEC673_10390	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AMEC673_10405	COG0776	regulation of translation
AMEC673_10410	COG0539	negative regulation of cytoplasmic translation
AMEC673_10415	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AMEC673_10420	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AMEC673_10425	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AMEC673_10440	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMEC673_10445	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMEC673_10450	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMEC673_10455	COG0633	Ferredoxin
AMEC673_10460	COG4221	oxidoreductase activity
AMEC673_10485	COG0745	RESPONSE REGULATOR receiver
AMEC673_10485	COG3706	GGDEF domain
AMEC673_10500	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AMEC673_10505	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMEC673_10515	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AMEC673_10525	COG4783	chaperone-mediated protein folding
AMEC673_10530	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AMEC673_10535	COG1393	Belongs to the ArsC family
AMEC673_10570	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AMEC673_10580	COG1960	acyl-CoA dehydrogenase activity
AMEC673_10605	COG0572	uridine kinase
AMEC673_10610	COG3769	mannosylglycerate metabolic process
AMEC673_10615	COG1215	transferase activity, transferring glycosyl groups
AMEC673_10640	COG0534	Mate efflux family protein
AMEC673_10660	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMEC673_10730	COG3011	Protein conserved in bacteria
AMEC673_10780	COG0405	Gamma-glutamyltransferase
AMEC673_10785	COG1024	Enoyl-CoA hydratase
AMEC673_10845	COG1671	Belongs to the UPF0178 family
AMEC673_10850	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_10855	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_10860	COG1960	acyl-CoA dehydrogenase activity
AMEC673_10865	COG0662	Cupin 2, conserved barrel domain protein
AMEC673_10865	COG2207	Transcriptional regulator
AMEC673_10880	COG1505	serine-type exopeptidase activity
AMEC673_10920	COG0596	Alpha beta hydrolase
AMEC673_10930	COG0716	FMN binding
AMEC673_10935	COG2801	Transposase and inactivated derivatives
AMEC673_10940	COG2963	transposase activity
AMEC673_10950	COG0735	belongs to the Fur family
AMEC673_10960	COG1984	allophanate hydrolase subunit 2
AMEC673_10965	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AMEC673_10970	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AMEC673_10975	COG2996	Protein conserved in bacteria
AMEC673_10980	COG1765	OsmC-like protein
AMEC673_10985	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMEC673_10995	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMEC673_11010	COG0436	Aminotransferase
AMEC673_11015	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AMEC673_11020	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AMEC673_11045	COG3012	SEC-C Motif Domain Protein
AMEC673_11050	COG0366	Alpha amylase catalytic
AMEC673_11055	COG0604	alcohol dehydrogenase
AMEC673_11065	COG1960	acyl-CoA dehydrogenase activity
AMEC673_11075	COG4771	TonB-dependent receptor
AMEC673_11095	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AMEC673_11100	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AMEC673_11120	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AMEC673_11125	COG0315	cyclic pyranopterin monophosphate synthase activity
AMEC673_11130	COG0521	Mo-molybdopterin cofactor biosynthetic process
AMEC673_11135	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AMEC673_11145	COG2423	ornithine cyclodeaminase activity
AMEC673_11150	COG0436	Aminotransferase
AMEC673_11160	COG1522	sequence-specific DNA binding
AMEC673_11185	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AMEC673_11195	COG3268	Saccharopine dehydrogenase
AMEC673_11200	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMEC673_11215	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AMEC673_11220	COG4771	TonB-dependent receptor
AMEC673_11230	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMEC673_11290	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AMEC673_11295	COG1074	ATP-dependent DNA helicase activity
AMEC673_11300	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AMEC673_11310	COG1022	Amp-dependent synthetase and ligase
AMEC673_11340	COG0583	DNA-binding transcription factor activity
AMEC673_11360	COG0640	Transcriptional regulator
AMEC673_11380	COG2204	response regulator
AMEC673_11390	COG4251	negative regulation of phosphorylation
AMEC673_11395	COG0784	Response regulator, receiver
AMEC673_11400	COG0784	Response regulator, receiver
AMEC673_11400	COG2205	protein histidine kinase activity
AMEC673_11460	COG3139	Protein of unknown function (DUF1315)
AMEC673_11470	COG1115	amino acid carrier protein
AMEC673_11475	COG2866	Carboxypeptidase
AMEC673_11495	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMEC673_11505	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMEC673_11510	COG1640	4-alpha-glucanotransferase
AMEC673_11520	COG0676	glucose-6-phosphate 1-epimerase activity
AMEC673_11525	COG0800	Aldolase
AMEC673_11535	COG0129	dihydroxy-acid dehydratase activity
AMEC673_11545	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMEC673_11550	COG1737	Transcriptional regulator
AMEC673_11555	COG0469	pyruvate kinase activity
AMEC673_11560	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMEC673_11580	COG2823	Periplasmic or secreted lipoprotein
AMEC673_11605	COG3665	Urea carboxylase-associated protein
AMEC673_11625	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_11630	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
AMEC673_11640	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AMEC673_11655	COG2721	sulfolactate sulfo-lyase activity
AMEC673_11660	COG1904	glucuronate isomerase
AMEC673_11665	COG0246	Mannitol dehydrogenase
AMEC673_11670	COG0800	Aldolase
AMEC673_11675	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMEC673_11680	COG2755	lipolytic protein G-D-S-L family
AMEC673_11690	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AMEC673_11700	COG4677	pectinesterase activity
AMEC673_11720	COG2356	endonuclease I
AMEC673_11745	COG0583	DNA-binding transcription factor activity
AMEC673_11755	COG1979	alcohol dehydrogenase
AMEC673_11760	COG1902	pentaerythritol trinitrate reductase activity
AMEC673_11765	COG2203	Gaf domain
AMEC673_11765	COG3706	GGDEF domain
AMEC673_11765	COG4251	negative regulation of phosphorylation
AMEC673_11765	COG5001	Diguanylate cyclase
AMEC673_11775	COG0753	catalase activity
AMEC673_11780	COG0784	Response regulator, receiver
AMEC673_11780	COG3437	response regulator, receiver
AMEC673_11785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMEC673_11785	COG4191	Histidine kinase
AMEC673_11820	COG0471	metal ion transport
AMEC673_11835	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMEC673_11835	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMEC673_11840	COG0668	transmembrane transport
AMEC673_11845	COG2226	methyltransferase
AMEC673_11850	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMEC673_11855	COG1388	LysM domain
AMEC673_11855	COG0741	lytic transglycosylase activity
AMEC673_11865	COG0215	cysteine-tRNA ligase activity
AMEC673_11870	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMEC673_11875	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AMEC673_11885	COG2268	Band 7 protein
AMEC673_11890	COG0583	DNA-binding transcription factor activity
AMEC673_11895	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_11910	COG1733	regulation of RNA biosynthetic process
AMEC673_11915	COG0604	alcohol dehydrogenase
AMEC673_11920	COG0861	Integral membrane protein TerC family
AMEC673_11925	COG1063	alcohol dehydrogenase
AMEC673_11930	COG0583	DNA-binding transcription factor activity
AMEC673_11965	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AMEC673_11970	COG1286	toxin biosynthetic process
AMEC673_11975	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AMEC673_11980	COG0285	dihydrofolate synthase activity
AMEC673_12005	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMEC673_12025	COG3609	addiction module antidote protein, CC2985 family
AMEC673_12030	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMEC673_12035	COG0318	PFAM AMP-dependent synthetase and ligase
AMEC673_12045	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AMEC673_12045	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMEC673_12085	COG0789	Transcriptional regulator
AMEC673_12095	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_12100	COG1119	ATPase activity
AMEC673_12110	COG0523	cobalamin synthesis protein
AMEC673_12115	COG1917	Cupin 2, conserved barrel domain protein
AMEC673_12115	COG4977	sequence-specific DNA binding
AMEC673_12120	COG1335	isochorismatase
AMEC673_12130	COG2031	fatty acid transporter
AMEC673_12135	COG5002	protein histidine kinase activity
AMEC673_12135	COG2205	protein histidine kinase activity
AMEC673_12135	COG0784	Response regulator, receiver
AMEC673_12140	COG0612	Peptidase, M16
AMEC673_12155	COG3101	peptidyl-lysine hydroxylation
AMEC673_12180	COG0446	pyridine nucleotide-disulphide oxidoreductase
AMEC673_12180	COG1902	pentaerythritol trinitrate reductase activity
AMEC673_12205	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AMEC673_12215	COG4399	Belongs to the UPF0754 family
AMEC673_12250	COG2186	Transcriptional regulator
AMEC673_12260	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AMEC673_12265	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMEC673_12270	COG2983	Belongs to the UPF0260 family
AMEC673_12275	COG0179	Fumarylacetoacetate (FAA) hydrolase
AMEC673_12290	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AMEC673_12295	COG0318	PFAM AMP-dependent synthetase and ligase
AMEC673_12300	COG2267	carboxylic ester hydrolase activity
AMEC673_12315	COG1214	PFAM Peptidase M22, glycoprotease
AMEC673_12320	COG1199	ATP-dependent helicase activity
AMEC673_12410	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AMEC673_12415	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AMEC673_12420	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMEC673_12425	COG0131	Imidazoleglycerol-phosphate dehydratase
AMEC673_12425	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AMEC673_12430	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AMEC673_12445	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AMEC673_12445	COG0140	phosphoribosyl-ATP diphosphatase activity
AMEC673_12455	COG2116	formate transmembrane transporter activity
AMEC673_12465	COG0612	Peptidase, M16
AMEC673_12490	COG3385	transposase activity
AMEC673_12535	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMEC673_12540	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMEC673_12550	COG3220	belongs to the UPF0276 family
AMEC673_12560	COG3710	Transcriptional regulator
AMEC673_12570	COG4251	negative regulation of phosphorylation
AMEC673_12570	COG3706	GGDEF domain
AMEC673_12570	COG2203	Gaf domain
AMEC673_12570	COG5001	Diguanylate cyclase
AMEC673_12580	COG1183	phosphatidylcholine synthase activity
AMEC673_12600	COG0277	FAD linked oxidase domain protein
AMEC673_12605	COG1620	l-lactate permease
AMEC673_12625	COG0542	response to heat
AMEC673_12640	COG0564	pseudouridine synthase activity
AMEC673_12655	COG1595	DNA-templated transcription, initiation
AMEC673_12670	COG4221	oxidoreductase activity
AMEC673_12685	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AMEC673_12695	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AMEC673_12705	COG0142	geranyltranstransferase activity
AMEC673_12715	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AMEC673_12720	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AMEC673_12730	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AMEC673_12745	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMEC673_12745	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMEC673_12765	COG0488	(ABC) transporter
AMEC673_12775	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AMEC673_12785	COG0560	Phosphoserine phosphatase
AMEC673_12795	COG0084	hydrolase, TatD family'
AMEC673_12810	COG0571	ribonuclease III activity
AMEC673_12815	COG0681	Belongs to the peptidase S26 family
AMEC673_12840	COG1595	DNA-templated transcription, initiation
AMEC673_12845	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AMEC673_12860	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AMEC673_12940	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AMEC673_12945	COG1047	Peptidyl-prolyl cis-trans
AMEC673_12955	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AMEC673_12960	COG0196	riboflavin kinase activity
AMEC673_12965	COG0728	peptidoglycan biosynthetic process
AMEC673_12970	COG0268	Binds directly to 16S ribosomal RNA
AMEC673_12985	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_12990	COG0385	Bile acid
AMEC673_13020	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMEC673_13025	COG0776	regulation of translation
AMEC673_13030	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AMEC673_13035	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMEC673_13040	COG0740	serine-type endopeptidase activity
AMEC673_13045	COG0544	peptidyl-prolyl cis-trans isomerase activity
AMEC673_13060	COG1720	tRNA m6t6A37 methyltransferase activity
AMEC673_13070	COG1234	tRNA 3'-trailer cleavage
AMEC673_13080	COG0123	including yeast histone deacetylase and acetoin utilization protein
AMEC673_13095	COG0517	IMP dehydrogenase activity
AMEC673_13095	COG0516	GMP reductase activity
AMEC673_13100	COG1570	exodeoxyribonuclease VII activity
AMEC673_13120	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMEC673_13125	COG2976	Protein conserved in bacteria
AMEC673_13145	COG3063	Type IV pilus biogenesis stability protein PilW
AMEC673_13150	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AMEC673_13160	COG2166	iron-sulfur cluster assembly
AMEC673_13175	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMEC673_13180	COG0719	Fe-S assembly protein
AMEC673_13185	COG0396	ATPase activity
AMEC673_13190	COG0719	Fe-S assembly protein
AMEC673_13195	COG1104	cysteine desulfurase activity
AMEC673_13200	COG1959	2 iron, 2 sulfur cluster binding
AMEC673_13210	COG2072	flavoprotein involved in K transport
AMEC673_13215	COG1045	serine acetyltransferase
AMEC673_13220	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AMEC673_13225	COG0483	inositol monophosphate 1-phosphatase activity
AMEC673_13235	COG3279	Response regulator of the LytR AlgR family
AMEC673_13240	COG2963	transposase activity
AMEC673_13245	COG2801	Transposase and inactivated derivatives
AMEC673_13250	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AMEC673_13255	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AMEC673_13260	COG1862	Preprotein translocase
AMEC673_13265	COG0343	queuine tRNA-ribosyltransferase activity
AMEC673_13285	COG1842	Phage shock protein A
AMEC673_13290	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AMEC673_13310	COG0754	glutathionylspermidine amidase activity
AMEC673_13340	COG2066	Belongs to the glutaminase family
AMEC673_13345	COG1785	Belongs to the alkaline phosphatase family
AMEC673_13405	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMEC673_13435	COG2171	N-acyltransferase activity
AMEC673_13455	COG0438	transferase activity, transferring glycosyl groups
AMEC673_13470	COG0367	asparagine synthase
AMEC673_13475	COG0438	transferase activity, transferring glycosyl groups
AMEC673_13495	COG0110	maltose O-acetyltransferase activity
AMEC673_13500	COG2244	polysaccharide biosynthetic process
AMEC673_13525	COG2327	Polysaccharide pyruvyl transferase
AMEC673_13565	COG0489	protein tyrosine kinase activity
AMEC673_13575	COG3409	Peptidoglycan-binding domain 1 protein
AMEC673_13575	COG3267	Type II secretory pathway component ExeA
AMEC673_13580	COG2827	Endonuclease containing a URI domain
AMEC673_13600	COG1560	Kdo2-lipid A biosynthetic process
AMEC673_13615	COG1960	acyl-CoA dehydrogenase activity
AMEC673_13635	COG1435	thymidine kinase activity
AMEC673_13650	COG1609	Transcriptional regulator
AMEC673_13655	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AMEC673_13675	COG1082	Xylose isomerase domain protein TIM barrel
AMEC673_13680	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AMEC673_13685	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMEC673_13730	COG1012	belongs to the aldehyde dehydrogenase family
AMEC673_13750	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
AMEC673_13755	COG0789	Transcriptional regulator
AMEC673_13785	COG1960	acyl-CoA dehydrogenase activity
AMEC673_13845	COG2080	2 iron, 2 sulfur cluster binding
AMEC673_13850	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AMEC673_13855	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMEC673_13905	COG0601	transmembrane transport
AMEC673_13915	COG4172	Belongs to the ABC transporter superfamily
AMEC673_13920	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_13935	COG0693	protein deglycase activity
AMEC673_13940	COG1295	ribonuclease BN
AMEC673_13960	COG3279	Response regulator of the LytR AlgR family
AMEC673_14020	COG4681	YaeQ
AMEC673_14055	COG0339	signal peptide processing
AMEC673_14065	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AMEC673_14095	COG0514	ATP-dependent DNA helicase (RecQ)
AMEC673_14120	COG4251	negative regulation of phosphorylation
AMEC673_14125	COG2133	pyrroloquinoline quinone binding
AMEC673_14170	COG0738	Major facilitator superfamily
AMEC673_14175	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMEC673_14185	COG2971	BadF BadG BcrA BcrD
AMEC673_14210	COG0583	DNA-binding transcription factor activity
AMEC673_14235	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMEC673_14240	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMEC673_14245	COG0006	proline dipeptidase activity
AMEC673_14255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMEC673_14265	COG2205	protein histidine kinase activity
AMEC673_14275	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AMEC673_14280	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AMEC673_14285	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMEC673_14305	COG3313	Fe-S protein
AMEC673_14330	COG2801	Transposase and inactivated derivatives
AMEC673_14335	COG2963	transposase activity
AMEC673_14340	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMEC673_14345	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMEC673_14350	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AMEC673_14355	COG2186	Transcriptional regulator
AMEC673_14370	COG3577	Aspartyl protease
AMEC673_14375	COG0157	Belongs to the NadC ModD family
AMEC673_14380	COG4969	Belongs to the N-Me-Phe pilin family
AMEC673_14385	COG1459	type II secretion system
AMEC673_14390	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AMEC673_14410	COG3608	succinylglutamate desuccinylase aspartoacylase
AMEC673_14415	COG0840	transmembrane signaling receptor activity
AMEC673_14420	COG4566	intracellular signal transduction
AMEC673_14425	COG1192	Involved in chromosome partitioning
AMEC673_14435	COG2198	Histidine kinase
AMEC673_14435	COG0643	Histidine kinase
AMEC673_14440	COG0745	RESPONSE REGULATOR receiver
AMEC673_14445	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AMEC673_14455	COG2201	protein-glutamate methylesterase activity
AMEC673_14460	COG0835	chemotaxis
AMEC673_14465	COG0840	transmembrane signaling receptor activity
AMEC673_14470	COG0494	nUDIX hydrolase
AMEC673_14480	COG0739	heme binding
AMEC673_14485	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
AMEC673_14490	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMEC673_14495	COG0849	cell division
AMEC673_14500	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AMEC673_14505	COG1181	Belongs to the D-alanine--D-alanine ligase family
AMEC673_14520	COG0772	Belongs to the SEDS family
AMEC673_14525	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMEC673_14535	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AMEC673_14540	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMEC673_14545	COG0768	penicillin binding
AMEC673_14550	COG3116	cell division
AMEC673_14560	COG2001	Belongs to the MraZ family
AMEC673_14580	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMEC673_14585	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMEC673_14605	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AMEC673_14605	COG0678	peroxiredoxin activity
AMEC673_14620	COG3706	GGDEF domain
AMEC673_14630	COG2204	response regulator
AMEC673_14655	COG0668	transmembrane transport
AMEC673_14660	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AMEC673_14665	COG0189	ligase activity
AMEC673_14670	COG1678	Uncharacterized ACR, COG1678
AMEC673_14675	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMEC673_14700	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AMEC673_14705	COG0762	integral membrane protein
AMEC673_14715	COG0446	pyridine nucleotide-disulphide oxidoreductase
AMEC673_14715	COG1902	pentaerythritol trinitrate reductase activity
AMEC673_14740	COG1764	response to oxidative stress
AMEC673_14745	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMEC673_14755	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AMEC673_14765	COG2814	Major facilitator Superfamily
AMEC673_14800	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AMEC673_14810	COG0083	homoserine kinase activity
AMEC673_14825	COG0583	DNA-binding transcription factor activity
AMEC673_14840	COG2197	response regulator
AMEC673_14845	COG4585	Histidine kinase
AMEC673_14860	COG0640	Transcriptional regulator
AMEC673_14870	COG0431	NADPH-dependent FMN reductase
AMEC673_14875	COG0798	PFAM Bile acid sodium symporter
AMEC673_14880	COG2201	protein-glutamate methylesterase activity
AMEC673_14885	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
AMEC673_14895	COG5002	protein histidine kinase activity
AMEC673_14895	COG3850	Histidine kinase
AMEC673_14915	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AMEC673_14925	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMEC673_14950	COG1748	Saccharopine dehydrogenase
AMEC673_14970	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AMEC673_14975	COG3107	peptidoglycan biosynthetic process
AMEC673_14985	COG0438	transferase activity, transferring glycosyl groups
AMEC673_14995	COG2823	Periplasmic or secreted lipoprotein
AMEC673_15015	COG4585	Histidine kinase
AMEC673_15020	COG2197	response regulator
AMEC673_15035	COG4771	TonB-dependent receptor
AMEC673_15045	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AMEC673_15050	COG0372	Belongs to the citrate synthase family
AMEC673_15055	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AMEC673_15060	COG2828	Protein conserved in bacteria
AMEC673_15065	COG2203	Gaf domain
AMEC673_15065	COG2199	diguanylate cyclase activity
AMEC673_15085	COG0784	Response regulator, receiver
AMEC673_15085	COG2198	Histidine kinase
AMEC673_15085	COG5002	protein histidine kinase activity
AMEC673_15095	COG0069	glutamate synthase activity
AMEC673_15095	COG0070	glutamate synthase
AMEC673_15095	COG0067	glutamate synthase
AMEC673_15100	COG0493	'glutamate synthase
AMEC673_15120	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMEC673_15125	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
AMEC673_15130	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AMEC673_15150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMEC673_15155	COG5507	3-demethylubiquinone-9 3-methyltransferase
AMEC673_15180	COG1196	nuclear chromosome segregation
AMEC673_15180	COG0739	heme binding
AMEC673_15180	COG0741	lytic transglycosylase activity
AMEC673_15185	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AMEC673_15195	COG0738	Major facilitator superfamily
AMEC673_15205	COG1902	pentaerythritol trinitrate reductase activity
AMEC673_15220	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMEC673_15225	COG0625	glutathione transferase activity
AMEC673_15245	COG2894	cell division
AMEC673_15250	COG0850	regulation of cytokinetic process
AMEC673_15300	COG1914	H( )-stimulated, divalent metal cation uptake system
AMEC673_15305	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AMEC673_15320	COG0174	glutamine synthetase
AMEC673_15330	COG3852	Histidine kinase
AMEC673_15335	COG2204	response regulator
AMEC673_15340	COG3437	response regulator, receiver
AMEC673_15345	COG0204	Acyl-transferase
AMEC673_15360	COG3706	GGDEF domain
AMEC673_15385	COG0525	valine-tRNA ligase activity
AMEC673_15390	COG2927	DNA polymerase III (CHI subunit)
AMEC673_15395	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AMEC673_15400	COG0795	lipopolysaccharide-transporting ATPase activity
AMEC673_15405	COG0795	lipopolysaccharide-transporting ATPase activity
AMEC673_15485	COG3385	transposase activity
AMEC673_15490	COG3135	benzoate transporter
AMEC673_15495	COG2814	Major facilitator Superfamily
AMEC673_15500	COG1028	Short-chain dehydrogenase reductase Sdr
AMEC673_15520	COG3485	protocatechuate 3,4-dioxygenase
AMEC673_15530	COG4948	Mandelate Racemase Muconate Lactonizing
AMEC673_15535	COG0583	DNA-binding transcription factor activity
AMEC673_15540	COG1414	Transcriptional regulator
AMEC673_15545	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AMEC673_15550	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AMEC673_15555	COG0183	Belongs to the thiolase family
AMEC673_15560	COG0596	Alpha beta hydrolase
AMEC673_15570	COG1401	restriction endodeoxyribonuclease activity
AMEC673_15570	COG1401	restriction endodeoxyribonuclease activity
AMEC673_15610	COG0673	inositol 2-dehydrogenase activity
AMEC673_15620	COG0628	permease
AMEC673_15650	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AMEC673_15660	COG0642	Histidine kinase
AMEC673_15690	COG0697	spore germination
AMEC673_15710	COG1971	Probably functions as a manganese efflux pump
AMEC673_15735	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AMEC673_15740	COG3706	GGDEF domain
AMEC673_15745	COG0679	Auxin Efflux Carrier
AMEC673_15750	COG2267	carboxylic ester hydrolase activity
AMEC673_15785	COG1131	(ABC) transporter
AMEC673_15795	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AMEC673_15845	COG2205	protein histidine kinase activity
AMEC673_15855	COG0348	domain, Protein
AMEC673_15855	COG3901	Regulator of nitric oxide reductase transcription
AMEC673_15865	COG2197	response regulator
AMEC673_15905	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AMEC673_15910	COG0583	DNA-binding transcription factor activity
AMEC673_15915	COG1304	FMN binding
AMEC673_15920	COG0277	FAD linked oxidase domain protein
AMEC673_15930	COG1462	curli production assembly transport component CsgG
AMEC673_15960	COG2197	response regulator
AMEC673_15975	COG0513	Belongs to the DEAD box helicase family
AMEC673_15980	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AMEC673_15980	COG3264	Mechanosensitive ion channel
AMEC673_16000	COG2199	diguanylate cyclase activity
AMEC673_16000	COG2202	Pas domain
AMEC673_16000	COG2200	EAL domain
AMEC673_16025	COG0730	response to heat
AMEC673_16045	COG4191	Histidine kinase
AMEC673_16055	COG0417	DNA replication proofreading
AMEC673_16065	COG0318	PFAM AMP-dependent synthetase and ligase
AMEC673_16095	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMEC673_16105	COG1573	uracil-dna glycosylase
AMEC673_16110	COG3300	MHYT domain
AMEC673_16110	COG5001	Diguanylate cyclase
AMEC673_16130	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AMEC673_16150	COG1983	PspC domain protein
AMEC673_16155	COG1842	Phage shock protein A
AMEC673_16165	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMEC673_16175	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AMEC673_16175	COG2885	chlorophyll binding
AMEC673_16180	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AMEC673_16190	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
AMEC673_16195	COG0204	Acyl-transferase
AMEC673_16200	COG0204	Acyl-transferase
AMEC673_16205	COG0668	transmembrane transport
AMEC673_16220	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMEC673_16225	COG0733	neurotransmitter:sodium symporter activity
AMEC673_16240	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMEC673_16255	COG0716	FMN binding
AMEC673_16265	COG0848	biopolymer transport protein
AMEC673_16275	COG0457	Tetratricopeptide repeat
AMEC673_16280	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AMEC673_16305	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AMEC673_16310	COG0702	epimerase
AMEC673_16325	COG5001	Diguanylate cyclase
AMEC673_16325	COG5002	protein histidine kinase activity
AMEC673_16335	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AMEC673_16345	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMEC673_16355	COG0583	DNA-binding transcription factor activity
AMEC673_16360	COG0121	glutamine amidotransferase
AMEC673_16375	COG4682	membrane
AMEC673_16395	COG1953	Uracil, thiamine, allantoin
AMEC673_16400	COG4771	TonB-dependent receptor
AMEC673_16410	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AMEC673_16415	COG0778	Nitroreductase
AMEC673_16420	COG0596	Alpha beta hydrolase
AMEC673_16425	COG0251	oxidation-reduction process
AMEC673_16430	COG1335	isochorismatase
AMEC673_16435	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMEC673_16440	COG1309	transcriptional regulator
AMEC673_16455	COG4628	conserved protein (DUF2132)
AMEC673_16460	COG2610	gluconate transmembrane transporter activity
AMEC673_16465	COG3265	gluconokinase activity
AMEC673_16470	COG1609	Transcriptional regulator
AMEC673_16475	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMEC673_16485	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMEC673_16505	COG1477	protein flavinylation
AMEC673_16510	COG2871	sodium ion transport
AMEC673_16515	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AMEC673_16520	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AMEC673_16525	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AMEC673_16530	COG1805	sodium ion transport
AMEC673_16535	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AMEC673_16540	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AMEC673_16545	COG0545	Peptidyl-prolyl cis-trans isomerase
AMEC673_16550	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AMEC673_16555	COG0039	L-malate dehydrogenase activity
AMEC673_16560	COG1438	arginine binding
AMEC673_16585	COG0572	uridine kinase
AMEC673_16590	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AMEC673_16605	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
AMEC673_16615	COG3706	GGDEF domain
AMEC673_16615	COG0745	RESPONSE REGULATOR receiver
AMEC673_16630	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMEC673_16650	COG0189	ligase activity
AMEC673_16660	COG4067	protein conserved in archaea
AMEC673_16660	COG0189	ligase activity
AMEC673_16675	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMEC673_16685	COG1283	sodium-dependent phosphate transmembrane transporter activity
AMEC673_16690	COG0667	Aldo Keto reductase
AMEC673_16745	COG0753	catalase activity
AMEC673_16760	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
AMEC673_16770	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AMEC673_16810	COG0583	DNA-binding transcription factor activity
AMEC673_16835	COG1216	Glycosyl transferase, family 2
AMEC673_16835	COG0438	transferase activity, transferring glycosyl groups
AMEC673_16855	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AMEC673_16905	COG0202	RNA polymerase activity
AMEC673_16930	COG0201	protein transport
AMEC673_16950	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMEC673_16985	COG5002	protein histidine kinase activity
AMEC673_16985	COG0784	Response regulator, receiver
AMEC673_17005	COG0557	exoribonuclease II activity
AMEC673_17025	COG4771	TonB-dependent receptor
AMEC673_17040	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AMEC673_17065	COG2234	aminopeptidase activity
AMEC673_17075	COG4251	negative regulation of phosphorylation
AMEC673_17090	COG5433	transposase activity
AMEC673_17095	COG5433	transposase activity
AMEC673_17105	COG1271	oxidase subunit
AMEC673_17110	COG1294	oxidase, subunit
AMEC673_17130	COG1522	sequence-specific DNA binding
AMEC673_17140	COG1278	Cold shock
AMEC673_17145	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AMEC673_17155	COG2226	methyltransferase
AMEC673_17165	COG0339	signal peptide processing
AMEC673_17170	COG2201	protein-glutamate methylesterase activity
AMEC673_17190	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMEC673_17195	COG0243	molybdopterin cofactor binding
AMEC673_17210	COG4946	Tricorn protease homolog
AMEC673_17210	COG0823	Involved in the tonB-independent uptake of proteins
AMEC673_17210	COG1506	peptidase
AMEC673_17260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMEC673_17270	COG2197	response regulator
AMEC673_17300	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AMEC673_17305	COG1278	Cold shock
AMEC673_17315	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AMEC673_17320	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AMEC673_17340	COG0281	malic enzyme
AMEC673_17350	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AMEC673_17380	COG0456	acetyltransferase
AMEC673_17400	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
AMEC673_17405	COG2177	Part of the ABC transporter FtsEX involved in
AMEC673_17410	COG2884	Cell division ATP-binding protein ftsE
AMEC673_17415	COG0552	protein localization to endoplasmic reticulum
AMEC673_17420	COG0742	ribosomal rna small subunit methyltransferase
AMEC673_17430	COG2095	MarC family integral membrane protein
AMEC673_17450	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AMEC673_17455	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMEC673_17460	COG0617	tRNA 3'-terminal CCA addition
AMEC673_17465	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AMEC673_17480	COG0076	glutamate decarboxylase activity
AMEC673_17495	COG0842	Transport permease protein
AMEC673_17500	COG1131	(ABC) transporter
AMEC673_17505	COG0745	RESPONSE REGULATOR receiver
AMEC673_17510	COG2205	protein histidine kinase activity
AMEC673_17530	COG1253	flavin adenine dinucleotide binding
AMEC673_17535	COG0701	Predicted permease
AMEC673_17540	COG1966	Carbon starvation protein
AMEC673_17590	COG0848	biopolymer transport protein
AMEC673_17600	COG0811	peptide transport
AMEC673_17620	COG3128	pkhd-type hydroxylase
AMEC673_17645	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMEC673_17650	COG0049	tRNA binding
AMEC673_17655	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMEC673_17660	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMEC673_17665	COG0085	RNA polymerase activity
AMEC673_17675	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AMEC673_17680	COG0081	regulation of translation
AMEC673_17685	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMEC673_17700	COG0250	Participates in transcription elongation, termination and antitermination
AMEC673_17705	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AMEC673_17710	COG1132	(ABC) transporter
AMEC673_17715	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AMEC673_17720	COG3590	peptidase
AMEC673_17735	COG0513	Belongs to the DEAD box helicase family
AMEC673_17745	COG0418	dihydroorotase activity
AMEC673_17750	COG3040	lipid binding
AMEC673_17755	COG4989	oxidoreductase activity
AMEC673_17760	COG0346	lactoylglutathione lyase activity
AMEC673_17765	COG0668	transmembrane transport
AMEC673_17785	COG0302	gtp cyclohydrolase
AMEC673_17795	COG2957	Belongs to the agmatine deiminase family
AMEC673_17815	COG1201	RNA secondary structure unwinding
AMEC673_17820	COG2311	Membrane
AMEC673_17835	COG1793	dna ligase
AMEC673_17840	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMEC673_17845	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMEC673_17860	COG0625	glutathione transferase activity
AMEC673_17865	COG0625	glutathione transferase activity
AMEC673_17875	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AMEC673_17880	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMEC673_17890	COG1012	belongs to the aldehyde dehydrogenase family
AMEC673_17895	COG0028	Belongs to the TPP enzyme family
AMEC673_17910	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AMEC673_17915	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AMEC673_17920	COG0330	HflC and HflK could
AMEC673_17925	COG0330	HflC and HflK could
AMEC673_17930	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMEC673_17935	COG1923	regulation of RNA biosynthetic process
AMEC673_17940	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMEC673_17955	COG0802	atpase or kinase
AMEC673_17960	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AMEC673_17960	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AMEC673_17965	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AMEC673_17975	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AMEC673_17985	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AMEC673_17990	COG0735	belongs to the Fur family
AMEC673_18000	COG0432	Pfam Uncharacterised protein family UPF0047
AMEC673_18010	COG0305	Participates in initiation and elongation during chromosome replication
AMEC673_18035	COG2258	MOSC domain
AMEC673_18105	COG0840	transmembrane signaling receptor activity
AMEC673_18110	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMEC673_18110	COG4191	Histidine kinase
AMEC673_18115	COG0840	transmembrane signaling receptor activity
AMEC673_18130	COG2855	membrane
AMEC673_18135	COG2175	clavaminate synthase activity
AMEC673_18140	COG0656	L-ascorbic acid biosynthetic process
AMEC673_18160	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMEC673_18165	COG4771	TonB-dependent receptor
AMEC673_18190	COG3706	GGDEF domain
AMEC673_18200	COG1472	Belongs to the glycosyl hydrolase 3 family
AMEC673_18210	COG2723	6-phospho-beta-galactosidase activity
AMEC673_18215	COG1609	Transcriptional regulator
AMEC673_18220	COG2814	Major facilitator Superfamily
AMEC673_18220	COG0477	Major facilitator Superfamily
AMEC673_18225	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AMEC673_18230	COG4988	ABC transporter
AMEC673_18235	COG4890	Cyd operon protein YbgT
AMEC673_18240	COG1294	oxidase, subunit
AMEC673_18280	COG4319	ketosteroid isomerase
AMEC673_18285	COG1335	isochorismatase
AMEC673_18290	COG2863	cytochrome
AMEC673_18295	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AMEC673_18300	COG1741	Belongs to the pirin family
AMEC673_18310	COG4771	TonB-dependent receptor
AMEC673_18325	COG1469	GTP cyclohydrolase I activity
AMEC673_18380	COG3237	CsbD-like
AMEC673_18395	COG1595	DNA-templated transcription, initiation
AMEC673_18425	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMEC673_18425	COG0596	Alpha beta hydrolase
AMEC673_18450	COG3038	cytochrome b561
AMEC673_18460	COG1252	NADH dehydrogenase
AMEC673_18465	COG4206	TonB-dependent receptor
AMEC673_18480	COG0583	DNA-binding transcription factor activity
AMEC673_18485	COG2067	long-chain fatty acid transport protein
AMEC673_18490	COG2130	NADP-dependent
AMEC673_18495	COG5001	Diguanylate cyclase
AMEC673_18495	COG4251	negative regulation of phosphorylation
AMEC673_18495	COG3706	GGDEF domain
AMEC673_18495	COG2203	Gaf domain
AMEC673_18500	COG2205	protein histidine kinase activity
AMEC673_18500	COG0784	Response regulator, receiver
AMEC673_18510	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMEC673_18515	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AMEC673_18520	COG1349	DNA-binding transcription factor activity
AMEC673_18525	COG0673	inositol 2-dehydrogenase activity
AMEC673_18540	COG0697	spore germination
AMEC673_18545	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AMEC673_18550	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AMEC673_18555	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AMEC673_18560	COG1166	arginine decarboxylase activity
AMEC673_18570	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AMEC673_18575	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AMEC673_18580	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AMEC673_18650	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMEC673_18660	COG0109	protoheme IX farnesyltransferase activity
AMEC673_18680	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AMEC673_18705	COG3866	Pectate lyase
AMEC673_18760	COG1324	tolerance protein
AMEC673_18765	COG4232	protein-disulfide reductase activity
AMEC673_18770	COG0739	heme binding
AMEC673_18780	COG0511	ligase activity, forming carbon-carbon bonds
AMEC673_18785	COG0439	Biotin carboxylase
AMEC673_18830	COG0154	amidase activity
AMEC673_18845	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMEC673_18850	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AMEC673_18865	COG0151	Belongs to the GarS family
AMEC673_18880	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AMEC673_18885	COG3954	Phosphoribulokinase
AMEC673_18895	COG0745	RESPONSE REGULATOR receiver
AMEC673_18910	COG1501	Belongs to the glycosyl hydrolase 31 family
AMEC673_18920	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AMEC673_18930	COG3031	protein transport across the cell outer membrane
AMEC673_18940	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AMEC673_18945	COG1459	type II secretion system
AMEC673_18950	COG2165	general secretion pathway protein
AMEC673_18955	COG2165	general secretion pathway protein
AMEC673_18960	COG2165	general secretion pathway protein
AMEC673_18965	COG4795	General secretion pathway protein
AMEC673_18980	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AMEC673_19000	COG1012	belongs to the aldehyde dehydrogenase family
AMEC673_19010	COG1011	Hydrolase
AMEC673_19015	COG0494	nUDIX hydrolase
AMEC673_19020	COG1218	3'(2'),5'-bisphosphate nucleotidase
AMEC673_19035	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
AMEC673_19045	COG3089	Belongs to the UPF0270 family
AMEC673_19050	COG0429	hydrolase of the alpha beta-hydrolase fold
AMEC673_19060	COG0488	(ABC) transporter
AMEC673_19080	COG2900	Belongs to the SlyX family
AMEC673_19090	COG0545	Peptidyl-prolyl cis-trans isomerase
AMEC673_19100	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMEC673_19105	COG2183	response to ionizing radiation
AMEC673_19125	COG0596	Alpha beta hydrolase
AMEC673_19130	COG1040	competence protein
AMEC673_19150	COG1794	racemase activity, acting on amino acids and derivatives
AMEC673_19165	COG0534	Mate efflux family protein
AMEC673_19180	COG1999	signal sequence binding
AMEC673_19185	COG0109	protoheme IX farnesyltransferase activity
AMEC673_19190	COG1612	heme a metabolic process
AMEC673_19215	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
AMEC673_19220	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AMEC673_19225	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AMEC673_19240	COG3706	GGDEF domain
AMEC673_19255	COG0129	dihydroxy-acid dehydratase activity
AMEC673_19260	COG2860	membrane
AMEC673_19265	COG0606	chelatase, subunit chli
AMEC673_19270	COG0583	DNA-binding transcription factor activity
AMEC673_19280	COG2814	Major facilitator Superfamily
AMEC673_19290	COG0729	surface antigen
AMEC673_19295	COG2911	Protein conserved in bacteria
AMEC673_19320	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMEC673_19330	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AMEC673_19350	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AMEC673_19375	COG1228	amidohydrolase
AMEC673_19395	COG0425	Belongs to the sulfur carrier protein TusA family
AMEC673_19410	COG1561	YicC-like family, N-terminal region
AMEC673_19435	COG2211	Major facilitator Superfamily
AMEC673_19440	COG1609	Transcriptional regulator
AMEC673_19460	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AMEC673_19460	COG2199	diguanylate cyclase activity
AMEC673_19485	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AMEC673_19505	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMEC673_19510	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AMEC673_19530	COG1475	DNA binding
AMEC673_19535	COG1192	Involved in chromosome partitioning
AMEC673_19560	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AMEC673_19565	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AMEC673_19575	COG0706	membrane insertase activity
AMEC673_19580	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AMEC673_19585	COG0594	ribonuclease P activity
AMEC673_19590	COG0230	Belongs to the bacterial ribosomal protein bL34 family