locus-tag class description I633_00005 PF00308 Bacterial dnaA protein I633_00005 PF08299 Bacterial dnaA protein helix-turn-helix I633_00005 PF11638 DnaA N-terminal domain I633_00010 PF02767 DNA polymerase III beta subunit, central domain I633_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain I633_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain I633_00015 PF02463 RecF/RecN/SMC N terminal domain I633_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_00020 PF18053 DNA gyrase B subunit insert domain I633_00020 PF00986 DNA gyrase B subunit, carboxyl terminus I633_00020 PF01751 Toprim domain I633_00020 PF00204 DNA gyrase B I633_00030 PF05746 DALR anticodon binding domain I633_00030 PF02092 Glycyl-tRNA synthetase beta subunit I633_00035 PF02091 Glycyl-tRNA synthetase alpha subunit I633_00040 PF03352 Methyladenine glycosylase I633_00050 PF04220 Der GTPase activator (YihI) I633_00060 PF00034 Cytochrome c I633_00110 PF01029 NusB family I633_00110 PF01189 16S rRNA methyltransferase RsmB/F I633_00115 PF02911 Formyl transferase, C-terminal domain I633_00115 PF00551 Formyl transferase I633_00120 PF01327 Polypeptide deformylase I633_00130 PF02481 DNA recombination-mediator protein A I633_00130 PF17782 DprA winged helix domain I633_00135 PF04361 Protein of unknown function (DUF494) I633_00145 PF01300 Telomere recombination I633_00150 PF01218 Coproporphyrinogen III oxidase I633_00155 PF03922 OmpW family I633_00165 PF01488 Shikimate / quinate 5-dehydrogenase I633_00165 PF18317 Shikimate 5'-dehydrogenase C-terminal domain I633_00165 PF08501 Shikimate dehydrogenase substrate binding domain I633_00170 PF00132 Bacterial transferase hexapeptide (six repeats) I633_00250 PF02225 PA domain I633_00250 PF04389 Peptidase family M28 I633_00255 PF00535 Glycosyl transferase family 2 I633_00260 PF00440 Bacterial regulatory proteins, tetR family I633_00265 PF04127 DNA / pantothenate metabolism flavoprotein I633_00265 PF02441 Flavoprotein I633_00270 PF04002 RadC-like JAB domain I633_00290 PF06082 Exopolysaccharide biosynthesis protein YbjH I633_00295 PF00830 Ribosomal L28 family I633_00300 PF00471 Ribosomal protein L33 I633_00310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain I633_00310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain I633_00310 PF06827 Zinc finger found in FPG and IleRS I633_00315 PF01467 Cytidylyltransferase-like I633_00345 PF00563 EAL domain I633_00345 PF03707 Bacterial signalling protein N terminal repeat I633_00345 PF00990 Diguanylate cyclase, GGDEF domain I633_00350 PF00155 Aminotransferase class I and II I633_00365 PF00581 Rhodanese-like domain I633_00370 PF01694 Rhomboid family I633_00370 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease I633_00380 PF04345 Chorismate lyase I633_00385 PF01040 UbiA prenyltransferase family I633_00390 PF05973 Phage derived protein Gp49-like (DUF891) I633_00400 PF04380 Membrane fusogenic activity I633_00405 PF00580 UvrD/REP helicase N-terminal domain I633_00405 PF13361 UvrD-like helicase C-terminal domain I633_00410 PF00563 EAL domain I633_00410 PF03707 Bacterial signalling protein N terminal repeat I633_00410 PF00990 Diguanylate cyclase, GGDEF domain I633_00415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III I633_00450 PF04143 Sulphur transport I633_00455 PF02082 Transcriptional regulator I633_00460 PF01925 Sulfite exporter TauE/SafE I633_00465 PF00753 Metallo-beta-lactamase superfamily I633_00475 PF07715 TonB-dependent Receptor Plug Domain I633_00475 PF00593 TonB dependent receptor I633_00490 PF00664 ABC transporter transmembrane region I633_00490 PF00005 ABC transporter I633_00495 PF00664 ABC transporter transmembrane region I633_00495 PF00005 ABC transporter I633_00510 PF01654 Cytochrome bd terminal oxidase subunit I I633_00525 PF00753 Metallo-beta-lactamase superfamily I633_00530 PF00578 AhpC/TSA family I633_00530 PF10417 C-terminal domain of 1-Cys peroxiredoxin I633_00540 PF00578 AhpC/TSA family I633_00560 PF00873 AcrB/AcrD/AcrF family I633_00570 PF02028 BCCT, betaine/carnitine/choline family transporter I633_00575 PF13193 AMP-binding enzyme C-terminal domain I633_00575 PF00501 AMP-binding enzyme I633_00605 PF00378 Enoyl-CoA hydratase/isomerase I633_00680 PF13533 Biotin-lipoyl like I633_00685 PF00005 ABC transporter I633_00705 PF01584 CheW-like domain I633_00705 PF02895 Signal transducing histidine kinase, homodimeric domain I633_00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_00705 PF01627 Hpt domain I633_00705 PF07194 P2 response regulator binding domain I633_00740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_00740 PF03466 LysR substrate binding domain I633_00745 PF00753 Metallo-beta-lactamase superfamily I633_00750 PF04317 YcjX-like family, DUF463 I633_00770 PF02661 Fic/DOC family I633_00775 PF04055 Radical SAM superfamily I633_00775 PF06968 Biotin and Thiamin Synthesis associated domain I633_00780 PF05690 Thiazole biosynthesis protein ThiG I633_00790 PF00899 ThiF family I633_00810 PF13667 ThiC-associated domain I633_00810 PF01964 Radical SAM ThiC family I633_00815 PF13667 ThiC-associated domain I633_00815 PF01964 Radical SAM ThiC family I633_00820 PF07719 Tetratricopeptide repeat I633_00820 PF07219 HemY protein N-terminus I633_00835 PF02602 Uroporphyrinogen-III synthase HemD I633_00840 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain I633_00840 PF03900 Porphobilinogen deaminase, C-terminal domain I633_00845 PF17151 Periplasmic sensor domain I633_00845 PF00990 Diguanylate cyclase, GGDEF domain I633_00860 PF00625 Guanylate kinase I633_00865 PF01192 RNA polymerase Rpb6 I633_00870 PF02824 TGS domain I633_00870 PF04607 Region found in RelA / SpoT proteins I633_00870 PF13291 ACT domain I633_00875 PF01042 Endoribonuclease L-PSP I633_00880 PF12105 SpoU, rRNA methylase, C-terminal I633_00880 PF00588 SpoU rRNA Methylase family I633_00885 PF00270 DEAD/DEAH box helicase I633_00885 PF17191 RecG wedge domain I633_00885 PF00271 Helicase conserved C-terminal domain I633_00890 PF04445 Putative SAM-dependent methyltransferase I633_00895 PF08534 Redoxin I633_00910 PF00528 Binding-protein-dependent transport system inner membrane component I633_00915 PF00005 ABC transporter I633_00915 PF08402 TOBE domain I633_00940 PF13683 Integrase core domain I633_00950 PF01527 Transposase I633_00960 PF00873 AcrB/AcrD/AcrF family I633_00970 PF00665 Integrase core domain I633_00970 PF13333 Integrase core domain I633_00970 PF13276 HTH-like domain I633_00985 PF00563 EAL domain I633_00985 PF04940 Sensors of blue-light using FAD I633_00990 PF03466 LysR substrate binding domain I633_00990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_00995 PF01810 LysE type translocator I633_01000 PF00893 Small Multidrug Resistance protein I633_01020 PF00529 HlyD membrane-fusion protein of T1SS I633_01020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I633_01025 PF00873 AcrB/AcrD/AcrF family I633_01045 PF00850 Histone deacetylase domain I633_01060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_01060 PF02743 Cache domain I633_01060 PF00672 HAMP domain I633_01070 PF11737 Protein of unknown function (DUF3300) I633_01075 PF00925 GTP cyclohydrolase II I633_01080 PF08448 PAS fold I633_01080 PF00563 EAL domain I633_01080 PF00990 Diguanylate cyclase, GGDEF domain I633_01105 PF03448 MgtE intracellular N domain I633_01105 PF01769 Divalent cation transporter I633_01105 PF00571 CBS domain I633_01110 PF00892 EamA-like transporter family I633_01115 PF00990 Diguanylate cyclase, GGDEF domain I633_01115 PF00072 Response regulator receiver domain I633_01130 PF06426 Serine acetyltransferase, N-terminal I633_01130 PF00132 Bacterial transferase hexapeptide (six repeats) I633_01135 PF13419 Haloacid dehalogenase-like hydrolase I633_01155 PF01678 Diaminopimelate epimerase I633_01160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain I633_01160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain I633_01175 PF01569 PAP2 superfamily I633_01195 PF02441 Flavoprotein I633_01225 PF00719 Inorganic pyrophosphatase I633_01265 PF07690 Major Facilitator Superfamily I633_01270 PF13419 Haloacid dehalogenase-like hydrolase I633_01290 PF00356 Bacterial regulatory proteins, lacI family I633_01335 PF00436 Single-strand binding protein family I633_01350 PF16363 GDP-mannose 4,6 dehydratase I633_01400 PF16901 C-terminal domain of alpha-glycerophosphate oxidase I633_01400 PF01266 FAD dependent oxidoreductase I633_01445 PF01471 Putative peptidoglycan binding domain I633_01445 PF13401 AAA domain I633_01455 PF00437 Type II/IV secretion system protein I633_01455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain I633_01460 PF00482 Type II secretion system (T2SS), protein F I633_01470 PF00114 Pilin (bacterial filament) I633_01470 PF07963 Prokaryotic N-terminal methylation motif I633_01475 PF00114 Pilin (bacterial filament) I633_01475 PF07963 Prokaryotic N-terminal methylation motif I633_01510 PF04085 rod shape-determining protein MreC I633_01515 PF04093 rod shape-determining protein MreD I633_01520 PF02545 Maf-like protein I633_01525 PF10150 Ribonuclease E/G family I633_01525 PF00575 S1 RNA binding domain I633_01535 PF00795 Carbon-nitrogen hydrolase I633_01555 PF04751 Protein of unknown function (DUF615) I633_01560 PF01523 Putative modulator of DNA gyrase I633_01570 PF16353 Domain of unknown function(DUF4981) I633_01570 PF02836 Glycosyl hydrolases family 2, TIM barrel domain I633_01570 PF02837 Glycosyl hydrolases family 2, sugar binding domain I633_01570 PF00703 Glycosyl hydrolases family 2 I633_01570 PF02929 Beta galactosidase small chain I633_01575 PF00486 Transcriptional regulatory protein, C terminal I633_01575 PF00072 Response regulator receiver domain I633_01580 PF00512 His Kinase A (phospho-acceptor) domain I633_01580 PF00497 Bacterial extracellular solute-binding proteins, family 3 I633_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_01585 PF08323 Starch synthase catalytic domain I633_01585 PF00534 Glycosyl transferases group 1 I633_01600 PF02390 Putative methyltransferase I633_01610 PF00730 HhH-GPD superfamily base excision DNA repair protein I633_01610 PF00633 Helix-hairpin-helix motif I633_01610 PF14815 NUDIX domain I633_01615 PF04362 Bacterial Fe(2+) trafficking I633_01620 PF01609 Transposase DDE domain I633_01620 PF05598 Transposase domain (DUF772) I633_01660 PF13520 Amino acid permease I633_01670 PF07731 Multicopper oxidase I633_01670 PF07732 Multicopper oxidase I633_01670 PF00394 Multicopper oxidase I633_01695 PF17200 Single Cache domain 2 I633_01695 PF00672 HAMP domain I633_01695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_01700 PF00072 Response regulator receiver domain I633_01720 PF01584 CheW-like domain I633_01725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_01725 PF08447 PAS fold I633_01725 PF13426 PAS domain I633_01730 PF03705 CheR methyltransferase, all-alpha domain I633_01730 PF01739 CheR methyltransferase, SAM binding domain I633_01735 PF03975 CheD chemotactic sensory transduction I633_01740 PF01339 CheB methylesterase I633_01740 PF00072 Response regulator receiver domain I633_01745 PF17200 Single Cache domain 2 I633_01745 PF00672 HAMP domain I633_01745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_01750 PF00072 Response regulator receiver domain I633_01755 PF01627 Hpt domain I633_01755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_01755 PF02895 Signal transducing histidine kinase, homodimeric domain I633_01755 PF09078 CheY binding I633_01755 PF01584 CheW-like domain I633_01760 PF01584 CheW-like domain I633_01780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_01780 PF13426 PAS domain I633_01780 PF08447 PAS fold I633_01785 PF01739 CheR methyltransferase, SAM binding domain I633_01785 PF03705 CheR methyltransferase, all-alpha domain I633_01790 PF03975 CheD chemotactic sensory transduction I633_01795 PF01339 CheB methylesterase I633_01795 PF00072 Response regulator receiver domain I633_01815 PF00356 Bacterial regulatory proteins, lacI family I633_01815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family I633_01825 PF01204 Trehalase I633_01840 PF13419 Haloacid dehalogenase-like hydrolase I633_01850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_01850 PF00072 Response regulator receiver domain I633_01850 PF13426 PAS domain I633_01850 PF08448 PAS fold I633_01850 PF00512 His Kinase A (phospho-acceptor) domain I633_01865 PF00356 Bacterial regulatory proteins, lacI family I633_01870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain I633_01870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold I633_01885 PF03825 Nucleoside H+ symporter I633_01890 PF01261 Xylose isomerase-like TIM barrel I633_01895 PF05199 GMC oxidoreductase I633_01895 PF00732 GMC oxidoreductase I633_01910 PF00465 Iron-containing alcohol dehydrogenase I633_01915 PF01063 Amino-transferase class IV I633_01920 PF00300 Histidine phosphatase superfamily (branch 1) I633_01930 PF00330 Aconitase family (aconitate hydratase) I633_01930 PF00694 Aconitase C-terminal domain I633_01940 PF00437 Type II/IV secretion system protein I633_01945 PF00338 Ribosomal protein S10p/S20e I633_01950 PF00297 Ribosomal protein L3 I633_01955 PF00573 Ribosomal protein L4/L1 family I633_01960 PF00276 Ribosomal protein L23 I633_01965 PF00181 Ribosomal Proteins L2, RNA binding domain I633_01965 PF03947 Ribosomal Proteins L2, C-terminal domain I633_01970 PF00203 Ribosomal protein S19 I633_01975 PF00237 Ribosomal protein L22p/L17e I633_01980 PF00189 Ribosomal protein S3, C-terminal domain I633_01980 PF07650 KH domain I633_01985 PF00252 Ribosomal protein L16p/L10e I633_01990 PF00831 Ribosomal L29 protein I633_01995 PF00366 Ribosomal protein S17 I633_02000 PF00534 Glycosyl transferases group 1 I633_02000 PF13439 Glycosyltransferase Family 4 I633_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_02035 PF00672 HAMP domain I633_02035 PF02743 Cache domain I633_02040 PF01432 Peptidase family M3 I633_02055 PF00551 Formyl transferase I633_02055 PF01842 ACT domain I633_02105 PF05661 Protein of unknown function (DUF808) I633_02110 PF12833 Helix-turn-helix domain I633_02120 PF00543 Nitrogen regulatory protein P-II I633_02125 PF00909 Ammonium Transporter Family I633_02140 PF04261 Dyp-type peroxidase family I633_02145 PF00672 HAMP domain I633_02145 PF00211 Adenylate and Guanylate cyclase catalytic domain I633_02150 PF00202 Aminotransferase class-III I633_02155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain I633_02155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain I633_02175 PF00873 AcrB/AcrD/AcrF family I633_02200 PF03989 DNA gyrase C-terminal domain, beta-propeller I633_02200 PF00521 DNA gyrase/topoisomerase IV, subunit A I633_02225 PF00171 Aldehyde dehydrogenase family I633_02230 PF04958 Arginine N-succinyltransferase beta subunit I633_02235 PF00202 Aminotransferase class-III I633_02245 PF00117 Glutamine amidotransferase class-I I633_02250 PF00579 tRNA synthetases class I (W and Y) I633_02255 PF00834 Ribulose-phosphate 3 epimerase family I633_02275 PF02086 D12 class N6 adenine-specific DNA methyltransferase I633_02285 PF01761 3-dehydroquinate synthase I633_02290 PF01202 Shikimate kinase I633_02295 PF11741 AMIN domain I633_02295 PF00263 Bacterial type II and III secretion system protein I633_02295 PF07660 Secretin and TonB N terminus short domain I633_02295 PF03958 Bacterial type II/III secretion system short domain I633_02320 PF00905 Penicillin binding protein transpeptidase domain I633_02320 PF00912 Transglycosylase I633_02320 PF17092 Penicillin-binding protein OB-like domain I633_02325 PF00390 Malic enzyme, N-terminal domain I633_02325 PF03949 Malic enzyme, NAD binding domain I633_02355 PF06628 Catalase-related immune-responsive I633_02355 PF00199 Catalase I633_02370 PF00563 EAL domain I633_02370 PF00990 Diguanylate cyclase, GGDEF domain I633_02370 PF03707 Bacterial signalling protein N terminal repeat I633_02375 PF00696 Amino acid kinase family I633_02375 PF00583 Acetyltransferase (GNAT) family I633_02390 PF00764 Arginosuccinate synthase I633_02395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain I633_02395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain I633_02400 PF00696 Amino acid kinase family I633_02405 PF01118 Semialdehyde dehydrogenase, NAD binding domain I633_02405 PF02774 Semialdehyde dehydrogenase, dimerisation domain I633_02410 PF02142 MGS-like domain I633_02420 PF00072 Response regulator receiver domain I633_02420 PF00486 Transcriptional regulatory protein, C terminal I633_02425 PF00512 His Kinase A (phospho-acceptor) domain I633_02425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_02425 PF00672 HAMP domain I633_02425 PF16527 Two-component sensor protein CpxA, periplasmic domain I633_02430 PF12146 Serine aminopeptidase, S33 I633_02435 PF00588 SpoU rRNA Methylase family I633_02445 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus I633_02445 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus I633_02450 PF02556 Preprotein translocase subunit SecB I633_02455 PF00462 Glutaredoxin I633_02460 PF00581 Rhodanese-like domain I633_02465 PF01551 Peptidase family M23 I633_02470 PF04748 Divergent polysaccharide deacetylase I633_02480 PF03009 Glycerophosphoryl diester phosphodiesterase family I633_02490 PF02666 Phosphatidylserine decarboxylase I633_02495 PF03193 RsgA GTPase I633_02500 PF00929 Exonuclease I633_02510 PF07715 TonB-dependent Receptor Plug Domain I633_02510 PF00593 TonB dependent receptor I633_02525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain I633_02525 PF00205 Thiamine pyrophosphate enzyme, central domain I633_02525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain I633_02530 PF10369 Small subunit of acetolactate synthase I633_02540 PF02416 mttA/Hcf106 family I633_02545 PF02416 mttA/Hcf106 family I633_02550 PF00902 Sec-independent protein translocase protein (TatC) I633_02560 PF01026 TatD related DNase I633_02565 PF00563 EAL domain I633_02565 PF01590 GAF domain I633_02565 PF00990 Diguanylate cyclase, GGDEF domain I633_02565 PF00360 Phytochrome region I633_02570 PF00490 Delta-aminolevulinic acid dehydratase I633_02575 PF02541 Ppx/GppA phosphatase family I633_02580 PF00271 Helicase conserved C-terminal domain I633_02580 PF00270 DEAD/DEAH box helicase I633_02585 PF00085 Thioredoxin I633_02590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I633_02590 PF07498 Rho termination factor, N-terminal domain I633_02590 PF07497 Rho termination factor, RNA-binding domain I633_02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_02600 PF09308 LuxQ, periplasmic I633_02600 PF00512 His Kinase A (phospho-acceptor) domain I633_02600 PF00072 Response regulator receiver domain I633_02605 PF06965 Na+/H+ antiporter 1 I633_02610 PF00731 AIR carboxylase I633_02615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain I633_02615 PF02222 ATP-grasp domain I633_02625 PF00210 Ferritin-like domain I633_02630 PF07995 Glucose / Sorbosone dehydrogenase I633_02650 PF00085 Thioredoxin I633_02665 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) I633_02670 PF00709 Adenylosuccinate synthetase I633_02675 PF00171 Aldehyde dehydrogenase family I633_02730 PF01380 SIS domain I633_02735 PF01168 Alanine racemase, N-terminal domain I633_02735 PF00842 Alanine racemase, C-terminal domain I633_02740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 I633_02750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I633_02775 PF08274 PhnA Zinc-Ribbon I633_02775 PF03831 PhnA domain I633_02780 PF00583 Acetyltransferase (GNAT) family I633_02805 PF01381 Helix-turn-helix I633_02810 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB I633_02820 PF05016 ParE toxin of type II toxin-antitoxin system, parDE I633_02840 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH I633_02850 PF01381 Helix-turn-helix I633_02920 PF00589 Phage integrase family I633_02920 PF13495 Phage integrase, N-terminal SAM-like domain I633_02935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain I633_02935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain I633_02935 PF00378 Enoyl-CoA hydratase/isomerase I633_02940 PF01464 Transglycosylase SLT domain I633_02940 PF14718 Soluble lytic murein transglycosylase L domain I633_02950 PF00557 Metallopeptidase family M24 I633_02960 PF00348 Polyprenyl synthetase I633_02965 PF00829 Ribosomal prokaryotic L21 protein I633_02970 PF01016 Ribosomal L27 protein I633_02975 PF01926 50S ribosome-binding GTPase I633_02975 PF01018 GTP1/OBG I633_02980 PF00186 Dihydrofolate reductase I633_02995 PF01476 LysM domain I633_02995 PF01551 Peptidase family M23 I633_03000 PF09335 SNARE associated Golgi protein I633_03010 PF01142 tRNA pseudouridine synthase D (TruD) I633_03015 PF02542 YgbB family I633_03020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase I633_03025 PF04977 Septum formation initiator I633_03035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_03035 PF17200 Single Cache domain 2 I633_03035 PF00672 HAMP domain I633_03040 PF00672 HAMP domain I633_03040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_03040 PF17200 Single Cache domain 2 I633_03045 PF00171 Aldehyde dehydrogenase family I633_03045 PF18327 Proline utilization A proline dehydrogenase N-terminal domain I633_03045 PF01619 Proline dehydrogenase I633_03045 PF14850 DNA-binding domain of Proline dehydrogenase I633_03070 PF02976 DNA mismatch repair enzyme MutH I633_03095 PF01925 Sulfite exporter TauE/SafE I633_03100 PF01790 Prolipoprotein diacylglyceryl transferase I633_03105 PF00303 Thymidylate synthase I633_03110 PF00072 Response regulator receiver domain I633_03115 PF00072 Response regulator receiver domain I633_03115 PF00990 Diguanylate cyclase, GGDEF domain I633_03120 PF07690 Major Facilitator Superfamily I633_03135 PF00849 RNA pseudouridylate synthase I633_03140 PF00176 SNF2 family N-terminal domain I633_03140 PF18339 RapA N-terminal Tudor like domain 1 I633_03140 PF18337 RapA N-terminal Tudor like domain I633_03140 PF12137 RNA polymerase recycling family C-terminal I633_03140 PF00271 Helicase conserved C-terminal domain I633_03145 PF18339 RapA N-terminal Tudor like domain 1 I633_03145 PF18337 RapA N-terminal Tudor like domain I633_03145 PF00176 SNF2 family N-terminal domain I633_03145 PF00271 Helicase conserved C-terminal domain I633_03145 PF12137 RNA polymerase recycling family C-terminal I633_03160 PF02562 PhoH-like protein I633_03160 PF13638 PIN domain I633_03170 PF10414 Sirohaem synthase dimerisation region I633_03170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases I633_03175 PF00271 Helicase conserved C-terminal domain I633_03175 PF00270 DEAD/DEAH box helicase I633_03175 PF12343 Cold shock protein DEAD box A I633_03175 PF03880 DbpA RNA binding domain I633_03195 PF02321 Outer membrane efflux protein I633_03200 PF00293 NUDIX domain I633_03210 PF00149 Calcineurin-like phosphoesterase I633_03215 PF05728 Uncharacterised protein family (UPF0227) I633_03240 PF13419 Haloacid dehalogenase-like hydrolase I633_03265 PF04055 Radical SAM superfamily I633_03275 PF00152 tRNA synthetases class II (D, K and N) I633_03280 PF07715 TonB-dependent Receptor Plug Domain I633_03280 PF00593 TonB dependent receptor I633_03290 PF13302 Acetyltransferase (GNAT) domain I633_03295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD I633_03300 PF05175 Methyltransferase small domain I633_03310 PF01722 BolA-like protein I633_03315 PF01569 PAP2 superfamily I633_03325 PF03861 ANTAR domain I633_03325 PF08376 Nitrate and nitrite sensing I633_03340 PF01740 STAS domain I633_03340 PF00916 Sulfate permease family I633_03345 PF04324 BFD-like [2Fe-2S] binding domain I633_03345 PF01077 Nitrite and sulphite reductase 4Fe-4S domain I633_03345 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain I633_03345 PF18267 Rubredoxin NAD+ reductase C-terminal domain I633_03345 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_03355 PF00384 Molybdopterin oxidoreductase I633_03355 PF01568 Molydopterin dinucleotide binding domain I633_03355 PF04324 BFD-like [2Fe-2S] binding domain I633_03355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain I633_03360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases I633_03360 PF14824 Sirohaem biosynthesis protein central I633_03360 PF10414 Sirohaem synthase dimerisation region I633_03365 PF00591 Glycosyl transferase family, a/b domain I633_03365 PF02885 Glycosyl transferase family, helical bundle domain I633_03370 PF13426 PAS domain I633_03370 PF08447 PAS fold I633_03370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_03375 PF00005 ABC transporter I633_03380 PF00528 Binding-protein-dependent transport system inner membrane component I633_03405 PF01323 DSBA-like thioredoxin domain I633_03410 PF00593 TonB dependent receptor I633_03410 PF07715 TonB-dependent Receptor Plug Domain I633_03425 PF13746 4Fe-4S dicluster domain I633_03425 PF12801 4Fe-4S binding domain I633_03425 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase I633_03440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I633_03440 PF02770 Acyl-CoA dehydrogenase, middle domain I633_03440 PF12806 Acetyl-CoA dehydrogenase C-terminal like I633_03440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I633_03455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain I633_03455 PF13378 Enolase C-terminal domain-like I633_03460 PF00596 Class II Aldolase and Adducin N-terminal domain I633_03470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I633_03495 PF02743 Cache domain I633_03495 PF00672 HAMP domain I633_03495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_03500 PF04545 Sigma-70, region 4 I633_03500 PF04546 Sigma-70, non-essential region I633_03500 PF00140 Sigma-70 factor, region 1.2 I633_03500 PF03979 Sigma-70 factor, region 1.1 I633_03500 PF04539 Sigma-70 region 3 I633_03500 PF04542 Sigma-70 region 2 I633_03505 PF10410 DnaB-helicase binding domain of primase I633_03505 PF01807 CHC2 zinc finger I633_03505 PF08275 DNA primase catalytic core, N-terminal domain I633_03505 PF08278 DNA primase DnaG DnaB-binding I633_03520 PF01165 Ribosomal protein S21 I633_03525 PF00814 Glycoprotease family I633_03535 PF02660 Glycerol-3-phosphate acyltransferase I633_03540 PF02152 Dihydroneopterin aldolase I633_03550 PF02673 Bacitracin resistance protein BacA I633_03555 PF01230 HIT domain I633_03570 PF03594 Benzoate membrane transport protein I633_03575 PF01381 Helix-turn-helix I633_03575 PF07883 Cupin domain I633_03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_03590 PF00512 His Kinase A (phospho-acceptor) domain I633_03590 PF00497 Bacterial extracellular solute-binding proteins, family 3 I633_03595 PF00072 Response regulator receiver domain I633_03595 PF00486 Transcriptional regulatory protein, C terminal I633_03600 PF00989 PAS fold I633_03600 PF11808 Phosphate regulon sensor protein PhoR I633_03600 PF00512 His Kinase A (phospho-acceptor) domain I633_03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_03605 PF12849 PBP superfamily domain I633_03625 PF01618 MotA/TolQ/ExbB proton channel family I633_03630 PF01618 MotA/TolQ/ExbB proton channel family I633_03635 PF02472 Biopolymer transport protein ExbD/TolR I633_03640 PF03544 Gram-negative bacterial TonB protein C-terminal I633_03650 PF00072 Response regulator receiver domain I633_03655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I633_03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_03655 PF01627 Hpt domain I633_03655 PF00072 Response regulator receiver domain I633_03655 PF00672 HAMP domain I633_03655 PF00512 His Kinase A (phospho-acceptor) domain I633_03660 PF13193 AMP-binding enzyme C-terminal domain I633_03660 PF00501 AMP-binding enzyme I633_03670 PF07995 Glucose / Sorbosone dehydrogenase I633_03675 PF00330 Aconitase family (aconitate hydratase) I633_03675 PF06434 Aconitate hydratase 2 N-terminus I633_03675 PF11791 Aconitate B N-terminal domain I633_03680 PF01048 Phosphorylase superfamily I633_03695 PF00330 Aconitase family (aconitate hydratase) I633_03695 PF11791 Aconitate B N-terminal domain I633_03695 PF06434 Aconitate hydratase 2 N-terminus I633_03720 PF00672 HAMP domain I633_03720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_03725 PF00149 Calcineurin-like phosphoesterase I633_03730 PF04379 ApaG domain I633_03735 PF00398 Ribosomal RNA adenine dimethylase I633_03740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA I633_03745 PF00639 PPIC-type PPIASE domain I633_03745 PF09312 SurA N-terminal domain I633_03750 PF03968 OstA-like protein I633_03750 PF04453 LPS transport system D I633_03755 PF00226 DnaJ domain I633_03755 PF05099 Tellurite resistance protein TerB I633_03760 PF02899 Phage integrase, N-terminal SAM-like domain I633_03760 PF00589 Phage integrase family I633_03765 PF10411 Disulfide bond isomerase protein N-terminus I633_03765 PF13098 Thioredoxin-like domain I633_03770 PF01368 DHH family I633_03770 PF02272 DHHA1 domain I633_03770 PF17768 RecJ OB domain I633_03780 PF11967 Recombination protein O N terminal I633_03780 PF02565 Recombination protein O C terminal I633_03785 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ I633_03790 PF01648 4'-phosphopantetheinyl transferase superfamily I633_03865 PF00501 AMP-binding enzyme I633_03865 PF13193 AMP-binding enzyme C-terminal domain I633_03875 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase I633_03885 PF00535 Glycosyl transferase family 2 I633_03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_03905 PF00512 His Kinase A (phospho-acceptor) domain I633_03905 PF08521 Two-component sensor kinase N-terminal I633_03910 PF00072 Response regulator receiver domain I633_03910 PF00486 Transcriptional regulatory protein, C terminal I633_03920 PF00572 Ribosomal protein L13 I633_03925 PF00380 Ribosomal protein S9/S16 I633_03930 PF00355 Rieske [2Fe-2S] domain I633_03930 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal I633_03935 PF00033 Cytochrome b/b6/petB I633_03935 PF00032 Cytochrome b(C-terminal)/b6/petD I633_03950 PF02798 Glutathione S-transferase, N-terminal domain I633_03950 PF00043 Glutathione S-transferase, C-terminal domain I633_03955 PF04386 Stringent starvation protein B I633_03960 PF00571 CBS domain I633_03960 PF03448 MgtE intracellular N domain I633_03960 PF01769 Divalent cation transporter I633_03965 PF00381 PTS HPr component phosphorylation site I633_03970 PF03668 P-loop ATPase protein family I633_03975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 I633_03980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein I633_03985 PF04963 Sigma-54 factor, core binding domain I633_03985 PF04552 Sigma-54, DNA binding domain I633_03985 PF00309 Sigma-54 factor, Activator interacting domain (AID) I633_03990 PF12399 Branched-chain amino acid ATP-binding cassette transporter I633_03990 PF00005 ABC transporter I633_03995 PF03968 OstA-like protein I633_04010 PF01380 SIS domain I633_04010 PF00571 CBS domain I633_04015 PF01699 Sodium/calcium exchanger protein I633_04030 PF02405 Permease MlaE I633_04035 PF02470 MlaD protein I633_04040 PF05494 MlaC protein I633_04050 PF01722 BolA-like protein I633_04075 PF13180 PDZ domain I633_04075 PF00595 PDZ domain I633_04095 PF01709 Transcriptional regulator I633_04130 PF03471 Transporter associated domain I633_04130 PF02080 TrkA-C domain I633_04130 PF00999 Sodium/hydrogen exchanger family I633_04145 PF00892 EamA-like transporter family I633_04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_04155 PF00512 His Kinase A (phospho-acceptor) domain I633_04155 PF00072 Response regulator receiver domain I633_04155 PF09308 LuxQ, periplasmic I633_04160 PF13458 Periplasmic binding protein I633_04185 PF02780 Transketolase, C-terminal domain I633_04185 PF02779 Transketolase, pyrimidine binding domain I633_04185 PF00456 Transketolase, thiamine diphosphate binding domain I633_04190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain I633_04190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I633_04195 PF00162 Phosphoglycerate kinase I633_04200 PF00274 Fructose-bisphosphate aldolase class-I I633_04210 PF07676 WD40-like Beta Propeller Repeat I633_04210 PF00326 Prolyl oligopeptidase family I633_04225 PF13089 Polyphosphate kinase N-terminal domain I633_04225 PF17941 Polyphosphate kinase C-terminal domain 1 I633_04225 PF13090 Polyphosphate kinase C-terminal domain 2 I633_04225 PF02503 Polyphosphate kinase middle domain I633_04235 PF00528 Binding-protein-dependent transport system inner membrane component I633_04250 PF00005 ABC transporter I633_04255 PF01895 PhoU domain I633_04260 PF01384 Phosphate transporter family I633_04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_04270 PF03466 LysR substrate binding domain I633_04280 PF03006 Haemolysin-III related I633_04285 PF01047 MarR family I633_04290 PF02566 OsmC-like protein I633_04295 PF01433 Peptidase family M1 domain I633_04305 PF01205 Uncharacterized protein family UPF0029 I633_04305 PF09186 Domain of unknown function (DUF1949) I633_04315 PF12320 Type 5 capsule protein repressor C-terminal domain I633_04315 PF00149 Calcineurin-like phosphoesterase I633_04335 PF00375 Sodium:dicarboxylate symporter family I633_04340 PF00491 Arginase family I633_04345 PF01979 Amidohydrolase family I633_04350 PF00392 Bacterial regulatory proteins, gntR family I633_04350 PF07702 UTRA domain I633_04365 PF00221 Aromatic amino acid lyase I633_04400 PF00005 ABC transporter I633_04400 PF12848 ABC transporter I633_04425 PF00924 Mechanosensitive ion channel I633_04455 PF00589 Phage integrase family I633_04520 PF12161 HsdM N-terminal domain I633_04520 PF02384 N-6 DNA Methylase I633_04530 PF11867 Domain of unknown function (DUF3387) I633_04530 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) I633_04530 PF18766 SWI2/SNF2 ATPase I633_04545 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) I633_04575 PF04172 LrgB-like family I633_04580 PF00072 Response regulator receiver domain I633_04615 PF06969 HemN C-terminal domain I633_04615 PF04055 Radical SAM superfamily I633_04620 PF01725 Ham1 family I633_04625 PF00271 Helicase conserved C-terminal domain I633_04625 PF00270 DEAD/DEAH box helicase I633_04630 PF12627 Probable RNA and SrmB- binding site of polymerase A I633_04630 PF01743 Poly A polymerase head domain I633_04650 PF01966 HD domain I633_04650 PF11871 Domain of unknown function (DUF3391) I633_04655 PF00694 Aconitase C-terminal domain I633_04660 PF00330 Aconitase family (aconitate hydratase) I633_04665 PF00180 Isocitrate/isopropylmalate dehydrogenase I633_04670 PF00682 HMGL-like I633_04670 PF08502 LeuA allosteric (dimerisation) domain I633_04680 PF03952 Enolase, N-terminal domain I633_04680 PF00113 Enolase, C-terminal TIM barrel domain I633_04685 PF00117 Glutamine amidotransferase class-I I633_04685 PF06418 CTP synthase N-terminus I633_04690 PF05188 MutS domain II I633_04690 PF01624 MutS domain I I633_04690 PF05190 MutS family domain IV I633_04690 PF05192 MutS domain III I633_04690 PF00488 MutS domain V I633_04695 PF02464 Competence-damaged protein I633_04700 PF00154 recA bacterial DNA recombination protein I633_04705 PF00005 ABC transporter I633_04710 PF12679 ABC-2 family transporter protein I633_04755 PF01578 Cytochrome C assembly protein I633_04760 PF04995 Heme exporter protein D (CcmD) I633_04765 PF03100 CcmE I633_04770 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal I633_04770 PF01578 Cytochrome C assembly protein I633_04775 PF08534 Redoxin I633_04780 PF03918 Cytochrome C biogenesis protein I633_04790 PF04333 MlaA lipoprotein I633_04795 PF16363 GDP-mannose 4,6 dehydratase I633_04805 PF00854 POT family I633_04815 PF00005 ABC transporter I633_04835 PF00953 Glycosyl transferase family 4 I633_04850 PF00483 Nucleotidyl transferase I633_04855 PF10531 SLBB domain I633_04860 PF18324 Hypothetical protein TT1725 I633_04860 PF00180 Isocitrate/isopropylmalate dehydrogenase I633_04875 PF03641 Possible lysine decarboxylase I633_04875 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases I633_04875 PF11892 Domain of unknown function (DUF3412) I633_04880 PF00072 Response regulator receiver domain I633_04880 PF00990 Diguanylate cyclase, GGDEF domain I633_04885 PF14489 QueF-like protein I633_04885 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term I633_04890 PF07348 Syd protein (SUKH-2) I633_04920 PF00072 Response regulator receiver domain I633_04920 PF08448 PAS fold I633_04920 PF00512 His Kinase A (phospho-acceptor) domain I633_04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_04920 PF13188 PAS domain I633_04925 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal I633_04925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit I633_04930 PF00374 Nickel-dependent hydrogenase I633_04935 PF17788 HypF Kae1-like domain I633_04935 PF07503 HypF finger I633_04935 PF01300 Telomere recombination I633_04935 PF00708 Acylphosphatase I633_04940 PF07503 HypF finger I633_04940 PF01300 Telomere recombination I633_04940 PF00708 Acylphosphatase I633_04940 PF17788 HypF Kae1-like domain I633_04945 PF01300 Telomere recombination I633_04945 PF17788 HypF Kae1-like domain I633_04945 PF00708 Acylphosphatase I633_04945 PF07503 HypF finger I633_04950 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit I633_04950 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal I633_04955 PF00374 Nickel-dependent hydrogenase I633_04960 PF01292 Prokaryotic cytochrome b561 I633_04965 PF01381 Helix-turn-helix I633_04970 PF01750 Hydrogenase maturation protease I633_04975 PF01455 HupF/HypC family I633_04980 PF07449 Hydrogenase-1 expression protein HyaE I633_04985 PF04809 HupH hydrogenase expression protein, C-terminal conserved region I633_05005 PF00374 Nickel-dependent hydrogenase I633_05010 PF00374 Nickel-dependent hydrogenase I633_05015 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA I633_05020 PF02492 CobW/HypB/UreG, nucleotide-binding domain I633_05025 PF00072 Response regulator receiver domain I633_05025 PF00158 Sigma-54 interaction domain I633_05025 PF02954 Bacterial regulatory protein, Fis family I633_05030 PF01455 HupF/HypC family I633_05035 PF13580 SIS domain I633_05040 PF01924 Hydrogenase formation hypA family I633_05045 PF00586 AIR synthase related protein, N-terminal domain I633_05045 PF02769 AIR synthase related protein, C-terminal domain I633_05055 PF04955 HupE / UreJ protein I633_05085 PF00849 RNA pseudouridylate synthase I633_05090 PF00258 Flavodoxin I633_05095 PF00132 Bacterial transferase hexapeptide (six repeats) I633_05095 PF14602 Hexapeptide repeat of succinyl-transferase I633_05095 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal I633_05100 PF01909 Nucleotidyltransferase domain I633_05100 PF08335 GlnD PII-uridylyltransferase I633_05100 PF01966 HD domain I633_05105 PF00557 Metallopeptidase family M24 I633_05110 PF00318 Ribosomal protein S2 I633_05115 PF00889 Elongation factor TS I633_05120 PF00696 Amino acid kinase family I633_05125 PF01765 Ribosome recycling factor I633_05130 PF01255 Putative undecaprenyl diphosphate synthase I633_05145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain I633_05145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase I633_05145 PF13288 DXP reductoisomerase C-terminal domain I633_05150 PF17820 PDZ domain I633_05150 PF02163 Peptidase family M50 I633_05165 PF03938 Outer membrane protein (OmpH-like) I633_05170 PF07977 FabA-like domain I633_05175 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 I633_05175 PF00132 Bacterial transferase hexapeptide (six repeats) I633_05190 PF01351 Ribonuclease HII I633_05210 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit I633_05215 PF09179 TilS substrate binding domain I633_05215 PF11734 TilS substrate C-terminal domain I633_05215 PF01171 PP-loop family I633_05220 PF00563 EAL domain I633_05220 PF00990 Diguanylate cyclase, GGDEF domain I633_05220 PF03707 Bacterial signalling protein N terminal repeat I633_05240 PF14437 MafB19-like deaminase I633_05250 PF00497 Bacterial extracellular solute-binding proteins, family 3 I633_05250 PF01464 Transglycosylase SLT domain I633_05270 PF01713 Smr domain I633_05315 PF00691 OmpA family I633_05315 PF05736 OprF membrane domain I633_05320 PF03412 Peptidase C39 family I633_05320 PF00005 ABC transporter I633_05320 PF00664 ABC transporter transmembrane region I633_05325 PF00529 HlyD membrane-fusion protein of T1SS I633_05325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I633_05330 PF00072 Response regulator receiver domain I633_05330 PF00196 Bacterial regulatory proteins, luxR family I633_05370 PF01584 CheW-like domain I633_05370 PF00072 Response regulator receiver domain I633_05375 PF03705 CheR methyltransferase, all-alpha domain I633_05375 PF01739 CheR methyltransferase, SAM binding domain I633_05380 PF00460 Flagella basal body rod protein I633_05385 PF00460 Flagella basal body rod protein I633_05385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I633_05390 PF03963 Flagellar hook capping protein - N-terminal region I633_05390 PF13861 FlgD Tudor-like domain I633_05390 PF13860 FlgD Ig-like domain I633_05395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I633_05395 PF00460 Flagella basal body rod protein I633_05395 PF07559 Flagellar basal body protein FlaE I633_05400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I633_05400 PF00460 Flagella basal body rod protein I633_05405 PF00460 Flagella basal body rod protein I633_05405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I633_05410 PF02107 Flagellar L-ring protein I633_05415 PF02119 Flagellar P-ring protein I633_05420 PF10135 Rod binding protein I633_05420 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase I633_05440 PF00700 Bacterial flagellin C-terminal helical region I633_05440 PF07196 Flagellin hook IN motif I633_05440 PF00669 Bacterial flagellin N-terminal helical region I633_05445 PF00669 Bacterial flagellin N-terminal helical region I633_05445 PF07196 Flagellin hook IN motif I633_05445 PF00700 Bacterial flagellin C-terminal helical region I633_05450 PF00700 Bacterial flagellin C-terminal helical region I633_05450 PF07196 Flagellin hook IN motif I633_05450 PF00669 Bacterial flagellin N-terminal helical region I633_05455 PF03646 FlaG protein I633_05460 PF07195 Flagellar hook-associated protein 2 C-terminus I633_05460 PF07196 Flagellin hook IN motif I633_05460 PF02465 Flagellar hook-associated protein 2 N-terminus I633_05465 PF02561 Flagellar protein FliS I633_05505 PF02348 Cytidylyltransferase I633_05510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family I633_05525 PF00669 Bacterial flagellin N-terminal helical region I633_05525 PF00700 Bacterial flagellin C-terminal helical region I633_05530 PF00158 Sigma-54 interaction domain I633_05530 PF00072 Response regulator receiver domain I633_05530 PF02954 Bacterial regulatory protein, Fis family I633_05535 PF00512 His Kinase A (phospho-acceptor) domain I633_05535 PF00989 PAS fold I633_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_05550 PF02049 Flagellar hook-basal body complex protein FliE I633_05565 PF14841 FliG middle domain I633_05565 PF01706 FliG C-terminal domain I633_05565 PF14842 FliG N-terminal domain I633_05575 PF18269 T3SS EscN ATPase C-terminal domain I633_05575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I633_05600 PF02154 Flagellar motor switch protein FliM I633_05600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term I633_05605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term I633_05610 PF04347 Flagellar biosynthesis protein, FliO I633_05615 PF00813 FliP family I633_05620 PF01313 Bacterial export proteins, family 3 I633_05625 PF01311 Bacterial export proteins, family 1 I633_05630 PF01312 FlhB HrpN YscU SpaS Family I633_05635 PF00771 FHIPEP family I633_05640 PF00448 SRP54-type protein, GTPase domain I633_05645 PF10609 NUBPL iron-transfer P-loop NTPase I633_05650 PF04542 Sigma-70 region 2 I633_05650 PF04539 Sigma-70 region 3 I633_05650 PF04545 Sigma-70, region 4 I633_05655 PF00072 Response regulator receiver domain I633_05660 PF04344 Chemotaxis phosphatase, CheZ I633_05665 PF01584 CheW-like domain I633_05665 PF07194 P2 response regulator binding domain I633_05665 PF01627 Hpt domain I633_05665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_05665 PF02895 Signal transducing histidine kinase, homodimeric domain I633_05670 PF01339 CheB methylesterase I633_05670 PF00072 Response regulator receiver domain I633_05690 PF01584 CheW-like domain I633_05700 PF04204 Homoserine O-succinyltransferase I633_05705 PF02607 B12 binding domain I633_05705 PF02574 Homocysteine S-methyltransferase I633_05705 PF00809 Pterin binding enzyme I633_05705 PF02310 B12 binding domain I633_05705 PF02965 Vitamin B12 dependent methionine synthase, activation domain I633_05710 PF02965 Vitamin B12 dependent methionine synthase, activation domain I633_05710 PF00809 Pterin binding enzyme I633_05710 PF02310 B12 binding domain I633_05710 PF02574 Homocysteine S-methyltransferase I633_05710 PF02607 B12 binding domain I633_05720 PF02743 Cache domain I633_05720 PF00672 HAMP domain I633_05720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_05725 PF03466 LysR substrate binding domain I633_05725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_05730 PF03466 LysR substrate binding domain I633_05730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_05735 PF00484 Carbonic anhydrase I633_05740 PF00916 Sulfate permease family I633_05740 PF01740 STAS domain I633_05750 PF13977 BetI-type transcriptional repressor, C-terminal I633_05750 PF00440 Bacterial regulatory proteins, tetR family I633_05755 PF05649 Peptidase family M13 I633_05755 PF01431 Peptidase family M13 I633_05765 PF02631 RecX family I633_05780 PF02599 Global regulator protein family I633_05800 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit I633_05805 PF00005 ABC transporter I633_05810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region I633_05810 PF00005 ABC transporter I633_05815 PF12911 N-terminal TM domain of oligopeptide transport permease C I633_05815 PF00528 Binding-protein-dependent transport system inner membrane component I633_05820 PF00528 Binding-protein-dependent transport system inner membrane component I633_05835 PF00158 Sigma-54 interaction domain I633_05835 PF02954 Bacterial regulatory protein, Fis family I633_05840 PF04012 PspA/IM30 family I633_05855 PF00351 Biopterin-dependent aromatic amino acid hydroxylase I633_05860 PF00158 Sigma-54 interaction domain I633_05860 PF18024 Helix-turn-helix domain I633_05870 PF02798 Glutathione S-transferase, N-terminal domain I633_05870 PF14497 Glutathione S-transferase, C-terminal domain I633_05875 PF01037 Lrp/AsnC ligand binding domain I633_05880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain I633_05880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I633_05895 PF03301 Tryptophan 2,3-dioxygenase I633_05900 PF00593 TonB dependent receptor I633_05905 PF00593 TonB dependent receptor I633_05905 PF07715 TonB-dependent Receptor Plug Domain I633_05940 PF01618 MotA/TolQ/ExbB proton channel family I633_05945 PF01618 MotA/TolQ/ExbB proton channel family I633_05950 PF02472 Biopolymer transport protein ExbD/TolR I633_05955 PF03544 Gram-negative bacterial TonB protein C-terminal I633_05965 PF13718 GNAT acetyltransferase 2 I633_05965 PF05127 Helicase I633_05965 PF17176 tRNA-binding domain I633_05965 PF08351 Domain of unknown function (DUF1726) I633_06000 PF01636 Phosphotransferase enzyme family I633_06010 PF00583 Acetyltransferase (GNAT) family I633_06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_06025 PF03466 LysR substrate binding domain I633_06040 PF00296 Luciferase-like monooxygenase I633_06045 PF00248 Aldo/keto reductase family I633_06065 PF13533 Biotin-lipoyl like I633_06070 PF01047 MarR family I633_06160 PF00009 Elongation factor Tu GTP binding domain I633_06160 PF03144 Elongation factor Tu domain 2 I633_06160 PF16658 Class II release factor RF3, C-terminal domain I633_06165 PF00750 tRNA synthetases class I (R) I633_06165 PF03485 Arginyl tRNA synthetase N terminal domain I633_06165 PF05746 DALR anticodon binding domain I633_06185 PF00291 Pyridoxal-phosphate dependent enzyme I633_06195 PF17158 Membrane-associated sensor, integral membrane domain I633_06195 PF00990 Diguanylate cyclase, GGDEF domain I633_06220 PF00487 Fatty acid desaturase I633_06225 PF00111 2Fe-2S iron-sulfur cluster binding domain I633_06225 PF00175 Oxidoreductase NAD-binding domain I633_06225 PF00970 Oxidoreductase FAD-binding domain I633_06235 PF03462 PCRF domain I633_06235 PF00472 RF-1 domain I633_06240 PF01336 OB-fold nucleic acid binding domain I633_06240 PF00152 tRNA synthetases class II (D, K and N) I633_06245 PF02558 Ketopantoate reductase PanE/ApbA I633_06245 PF08546 Ketopantoate reductase PanE/ApbA C terminal I633_06250 PF00849 RNA pseudouridylate synthase I633_06260 PF00675 Insulinase (Peptidase family M16) I633_06260 PF05193 Peptidase M16 inactive domain I633_06300 PF01713 Smr domain I633_06305 PF05175 Methyltransferase small domain I633_06310 PF01264 Chorismate synthase I633_06320 PF04293 SpoVR like protein I633_06325 PF04285 Protein of unknown function (DUF444) I633_06345 PF00462 Glutaredoxin I633_06350 PF00593 TonB dependent receptor I633_06350 PF07715 TonB-dependent Receptor Plug Domain I633_06375 PF04324 BFD-like [2Fe-2S] binding domain I633_06380 PF10417 C-terminal domain of 1-Cys peroxiredoxin I633_06380 PF00578 AhpC/TSA family I633_06385 PF00929 Exonuclease I633_06390 PF18393 MotY N-terminal domain I633_06390 PF00691 OmpA family I633_06395 PF03009 Glycerophosphoryl diester phosphodiesterase family I633_06400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I633_06405 PF00313 'Cold-shock' DNA-binding domain I633_06415 PF02225 PA domain I633_06415 PF04389 Peptidase family M28 I633_06420 PF00730 HhH-GPD superfamily base excision DNA repair protein I633_06420 PF00633 Helix-hairpin-helix motif I633_06425 PF02508 Rnf-Nqr subunit, membrane protein I633_06430 PF04205 FMN-binding domain I633_06450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit I633_06450 PF13375 RnfC Barrel sandwich hybrid domain I633_06450 PF10531 SLBB domain I633_06450 PF12838 4Fe-4S dicluster domain I633_06455 PF04060 Putative Fe-S cluster I633_06475 PF00271 Helicase conserved C-terminal domain I633_06475 PF17757 UvrB interaction domain I633_06475 PF12344 Ultra-violet resistance protein B I633_06475 PF02151 UvrB/uvrC motif I633_06475 PF04851 Type III restriction enzyme, res subunit I633_06490 PF06508 Queuosine biosynthesis protein QueC I633_06495 PF04055 Radical SAM superfamily I633_06505 PF13537 Glutamine amidotransferase domain I633_06505 PF00733 Asparagine synthase I633_06530 PF03600 Citrate transporter I633_06530 PF02080 TrkA-C domain I633_06535 PF00009 Elongation factor Tu GTP binding domain I633_06540 PF00459 Inositol monophosphatase family I633_06550 PF01507 Phosphoadenosine phosphosulfate reductase family I633_06555 PF00474 Sodium:solute symporter family I633_06560 PF00990 Diguanylate cyclase, GGDEF domain I633_06570 PF04542 Sigma-70 region 2 I633_06570 PF08281 Sigma-70, region 4 I633_06595 PF13519 von Willebrand factor type A domain I633_06595 PF07584 Aerotolerance regulator N-terminal I633_06600 PF00092 von Willebrand factor type A domain I633_06610 PF01882 Protein of unknown function DUF58 I633_06615 PF17863 AAA lid domain I633_06615 PF07726 ATPase family associated with various cellular activities (AAA) I633_06620 PF02803 Thiolase, C-terminal domain I633_06620 PF00108 Thiolase, N-terminal domain I633_06640 PF03707 Bacterial signalling protein N terminal repeat I633_06640 PF00990 Diguanylate cyclase, GGDEF domain I633_06640 PF00563 EAL domain I633_06645 PF00675 Insulinase (Peptidase family M16) I633_06645 PF05193 Peptidase M16 inactive domain I633_06650 PF00300 Histidine phosphatase superfamily (branch 1) I633_06660 PF01595 Cyclin M transmembrane N-terminal domain I633_06660 PF00571 CBS domain I633_06660 PF03471 Transporter associated domain I633_06665 PF01578 Cytochrome C assembly protein I633_06670 PF02978 Signal peptide binding domain I633_06670 PF00448 SRP54-type protein, GTPase domain I633_06670 PF02881 SRP54-type protein, helical bundle domain I633_06760 PF00886 Ribosomal protein S16 I633_06765 PF01782 RimM N-terminal domain I633_06765 PF05239 PRC-barrel domain I633_06770 PF01746 tRNA (Guanine-1)-methyltransferase I633_06775 PF01245 Ribosomal protein L19 I633_06780 PF03458 UPF0126 domain I633_06785 PF00378 Enoyl-CoA hydratase/isomerase I633_06790 PF00793 DAHP synthetase I family I633_06795 PF02153 Prephenate dehydrogenase I633_06795 PF01817 Chorismate mutase type II I633_06800 PF00800 Prephenate dehydratase I633_06800 PF01817 Chorismate mutase type II I633_06805 PF00072 Response regulator receiver domain I633_06810 PF01253 Translation initiation factor SUI1 I633_06820 PF00072 Response regulator receiver domain I633_06820 PF00486 Transcriptional regulatory protein, C terminal I633_06830 PF00990 Diguanylate cyclase, GGDEF domain I633_06830 PF03707 Bacterial signalling protein N terminal repeat I633_06830 PF00563 EAL domain I633_06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_06840 PF00512 His Kinase A (phospho-acceptor) domain I633_06850 PF00072 Response regulator receiver domain I633_06850 PF00158 Sigma-54 interaction domain I633_06855 PF00669 Bacterial flagellin N-terminal helical region I633_06855 PF07196 Flagellin hook IN motif I633_06855 PF00700 Bacterial flagellin C-terminal helical region I633_06870 PF01336 OB-fold nucleic acid binding domain I633_06870 PF00152 tRNA synthetases class II (D, K and N) I633_06870 PF02938 GAD domain I633_06875 PF00293 NUDIX domain I633_06880 PF02075 Crossover junction endodeoxyribonuclease RuvC I633_06890 PF05491 RuvB C-terminal winged helix domain I633_06890 PF05496 Holliday junction DNA helicase RuvB P-loop domain I633_06890 PF17864 RuvB AAA lid domain I633_06895 PF03061 Thioesterase superfamily I633_06900 PF01618 MotA/TolQ/ExbB proton channel family I633_06905 PF02472 Biopolymer transport protein ExbD/TolR I633_06925 PF00691 OmpA family I633_06930 PF16331 TolA binding protein trimerisation I633_06930 PF13174 Tetratricopeptide repeat I633_06935 PF02445 Quinolinate synthetase A protein I633_06955 PF08546 Ketopantoate reductase PanE/ApbA C terminal I633_06955 PF02558 Ketopantoate reductase PanE/ApbA I633_06965 PF02774 Semialdehyde dehydrogenase, dimerisation domain I633_06965 PF01118 Semialdehyde dehydrogenase, NAD binding domain I633_06970 PF00106 short chain dehydrogenase I633_06975 PF01292 Prokaryotic cytochrome b561 I633_06980 PF00563 EAL domain I633_06980 PF00990 Diguanylate cyclase, GGDEF domain I633_06980 PF03707 Bacterial signalling protein N terminal repeat I633_06995 PF03466 LysR substrate binding domain I633_06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_07000 PF01863 Protein of unknown function DUF45 I633_07010 PF00873 AcrB/AcrD/AcrF family I633_07020 PF00440 Bacterial regulatory proteins, tetR family I633_07020 PF08361 MAATS-type transcriptional repressor, C-terminal region I633_07025 PF07715 TonB-dependent Receptor Plug Domain I633_07025 PF00593 TonB dependent receptor I633_07050 PF00990 Diguanylate cyclase, GGDEF domain I633_07060 PF02470 MlaD protein I633_07090 PF01336 OB-fold nucleic acid binding domain I633_07090 PF00152 tRNA synthetases class II (D, K and N) I633_07100 PF01699 Sodium/calcium exchanger protein I633_07105 PF08443 RimK-like ATP-grasp domain I633_07105 PF18030 RimK PreATP-grasp domain I633_07140 PF06968 Biotin and Thiamin Synthesis associated domain I633_07140 PF04055 Radical SAM superfamily I633_07165 PF03575 Peptidase family S51 I633_07170 PF01451 Low molecular weight phosphotyrosine protein phosphatase I633_07175 PF01032 FecCD transport family I633_07210 PF00005 ABC transporter I633_07210 PF00664 ABC transporter transmembrane region I633_07215 PF06463 Molybdenum Cofactor Synthesis C I633_07215 PF04055 Radical SAM superfamily I633_07225 PF00486 Transcriptional regulatory protein, C terminal I633_07225 PF00072 Response regulator receiver domain I633_07230 PF00749 tRNA synthetases class I (E and Q), catalytic domain I633_07255 PF01207 Dihydrouridine synthase (Dus) I633_07270 PF13472 GDSL-like Lipase/Acylhydrolase family I633_07275 PF00005 ABC transporter I633_07285 PF01370 NAD dependent epimerase/dehydratase family I633_07285 PF08338 Domain of unknown function (DUF1731) I633_07290 PF02152 Dihydroneopterin aldolase I633_07295 PF01594 AI-2E family transporter I633_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_07300 PF08918 PhoQ Sensor I633_07325 PF03795 YCII-related domain I633_07330 PF00290 Tryptophan synthase alpha chain I633_07335 PF00291 Pyridoxal-phosphate dependent enzyme I633_07340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase I633_07340 PF00218 Indole-3-glycerol phosphate synthase I633_07345 PF00591 Glycosyl transferase family, a/b domain I633_07345 PF02885 Glycosyl transferase family, helical bundle domain I633_07350 PF00117 Glutamine amidotransferase class-I I633_07355 PF04715 Anthranilate synthase component I, N terminal region I633_07355 PF00425 chorismate binding enzyme I633_07360 PF02811 PHP domain I633_07365 PF01300 Telomere recombination I633_07370 PF02616 Segregation and condensation protein ScpA I633_07375 PF04079 Segregation and condensation complex subunit ScpB I633_07380 PF01479 S4 domain I633_07380 PF00849 RNA pseudouridylate synthase I633_07385 PF00248 Aldo/keto reductase family I633_07390 PF14602 Hexapeptide repeat of succinyl-transferase I633_07390 PF12464 Maltose acetyltransferase I633_07400 PF04286 Protein of unknown function (DUF445) I633_07440 PF00005 ABC transporter I633_07440 PF00664 ABC transporter transmembrane region I633_07445 PF00529 HlyD membrane-fusion protein of T1SS I633_07445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I633_07450 PF05724 Thiopurine S-methyltransferase (TPMT) I633_07455 PF04355 SmpA / OmlA family I633_07460 PF02463 RecF/RecN/SMC N terminal domain I633_07465 PF00210 Ferritin-like domain I633_07475 PF00465 Iron-containing alcohol dehydrogenase I633_07490 PF00561 alpha/beta hydrolase fold I633_07500 PF00593 TonB dependent receptor I633_07500 PF07715 TonB-dependent Receptor Plug Domain I633_07505 PF00196 Bacterial regulatory proteins, luxR family I633_07505 PF00072 Response regulator receiver domain I633_07510 PF00512 His Kinase A (phospho-acceptor) domain I633_07510 PF01627 Hpt domain I633_07510 PF00072 Response regulator receiver domain I633_07510 PF00672 HAMP domain I633_07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_07515 PF01025 GrpE I633_07520 PF00012 Hsp70 protein I633_07525 PF01556 DnaJ C terminal domain I633_07525 PF00226 DnaJ domain I633_07525 PF00684 DnaJ central domain I633_07530 PF01322 Cytochrome C' I633_07535 PF12792 CSS motif domain associated with EAL I633_07535 PF00563 EAL domain I633_07555 PF05173 Dihydrodipicolinate reductase, C-terminus I633_07555 PF01113 Dihydrodipicolinate reductase, N-terminus I633_07560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain I633_07560 PF00117 Glutamine amidotransferase class-I I633_07575 PF01272 Transcription elongation factor, GreA/GreB, C-term I633_07575 PF03449 Transcription elongation factor, N-terminal I633_07590 PF00011 Hsp20/alpha crystallin family I633_07595 PF00871 Acetokinase family I633_07620 PF00795 Carbon-nitrogen hydrolase I633_07625 PF03471 Transporter associated domain I633_07625 PF00571 CBS domain I633_07630 PF02130 Uncharacterized protein family UPF0054 I633_07635 PF02562 PhoH-like protein I633_07640 PF00919 Uncharacterized protein family UPF0004 I633_07640 PF01938 TRAM domain I633_07640 PF04055 Radical SAM superfamily I633_07685 PF00593 TonB dependent receptor I633_07685 PF07715 TonB-dependent Receptor Plug Domain I633_07690 PF03061 Thioesterase superfamily I633_07695 PF01613 Flavin reductase like domain I633_07705 PF01235 Sodium:alanine symporter family I633_07710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD I633_07715 PF01926 50S ribosome-binding GTPase I633_07715 PF06071 Protein of unknown function (DUF933) I633_07730 PF14693 Ribosomal protein TL5, C-terminal domain I633_07730 PF01386 Ribosomal L25p family I633_07735 PF00107 Zinc-binding dehydrogenase I633_07735 PF08240 Alcohol dehydrogenase GroES-like domain I633_07750 PF14572 Phosphoribosyl synthetase-associated domain I633_07750 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase I633_07755 PF08544 GHMP kinases C terminal I633_07755 PF00288 GHMP kinases N terminal domain I633_07760 PF03550 Outer membrane lipoprotein LolB I633_07775 PF00472 RF-1 domain I633_07775 PF03462 PCRF domain I633_07780 PF13847 Methyltransferase domain I633_07780 PF17827 PrmC N-terminal domain I633_07785 PF11849 Domain of unknown function (DUF3369) I633_07790 PF04247 Invasion gene expression up-regulator, SirB I633_07820 PF04241 Protein of unknown function (DUF423) I633_07835 PF14492 Elongation Factor G, domain II I633_07835 PF00679 Elongation factor G C-terminus I633_07835 PF03144 Elongation factor Tu domain 2 I633_07835 PF00009 Elongation factor Tu GTP binding domain I633_07835 PF03764 Elongation factor G, domain IV I633_07840 PF02560 Cyanate lyase C-terminal domain I633_07845 PF02560 Cyanate lyase C-terminal domain I633_07850 PF00069 Protein kinase domain I633_07865 PF13559 Domain of unknown function (DUF4129) I633_07865 PF11992 Domain of unknown function (DUF3488) I633_07865 PF01841 Transglutaminase-like superfamily I633_07875 PF07726 ATPase family associated with various cellular activities (AAA) I633_07875 PF17863 AAA lid domain I633_07880 PF03925 SeqA protein C-terminal domain I633_07880 PF17206 SeqA protein N-terminal domain I633_07885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III I633_07885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II I633_07885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain I633_07885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I I633_07900 PF00563 EAL domain I633_07900 PF00990 Diguanylate cyclase, GGDEF domain I633_07900 PF03707 Bacterial signalling protein N terminal repeat I633_07925 PF01906 Putative heavy-metal-binding I633_07950 PF01546 Peptidase family M20/M25/M40 I633_07950 PF07687 Peptidase dimerisation domain I633_07955 PF03960 ArsC family I633_07965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 I633_07980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I633_07985 PF04209 homogentisate 1,2-dioxygenase I633_08005 PF12327 FtsZ family, C-terminal domain I633_08005 PF00091 Tubulin/FtsZ family, GTPase domain I633_08020 PF00990 Diguanylate cyclase, GGDEF domain I633_08020 PF03707 Bacterial signalling protein N terminal repeat I633_08020 PF00563 EAL domain I633_08025 PF00563 EAL domain I633_08025 PF03707 Bacterial signalling protein N terminal repeat I633_08025 PF00990 Diguanylate cyclase, GGDEF domain I633_08030 PF00873 AcrB/AcrD/AcrF family I633_08050 PF02525 Flavodoxin-like fold I633_08060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I633_08075 PF01638 HxlR-like helix-turn-helix I633_08080 PF00990 Diguanylate cyclase, GGDEF domain I633_08080 PF05231 MASE1 I633_08080 PF08447 PAS fold I633_08080 PF13426 PAS domain I633_08080 PF00563 EAL domain I633_08080 PF08448 PAS fold I633_08090 PF01979 Amidohydrolase family I633_08095 PF00576 HIUase/Transthyretin family I633_08115 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I633_08115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I633_08120 PF01799 [2Fe-2S] binding domain I633_08120 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I633_08120 PF00111 2Fe-2S iron-sulfur cluster binding domain I633_08120 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I633_08125 PF08362 YcdC-like protein, C-terminal region I633_08125 PF00440 Bacterial regulatory proteins, tetR family I633_08150 PF00962 Adenosine/AMP deaminase I633_08160 PF00072 Response regulator receiver domain I633_08165 PF01590 GAF domain I633_08165 PF00563 EAL domain I633_08165 PF00360 Phytochrome region I633_08165 PF00990 Diguanylate cyclase, GGDEF domain I633_08170 PF00360 Phytochrome region I633_08170 PF00990 Diguanylate cyclase, GGDEF domain I633_08170 PF01590 GAF domain I633_08170 PF00563 EAL domain I633_08175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_08175 PF00512 His Kinase A (phospho-acceptor) domain I633_08175 PF09308 LuxQ, periplasmic I633_08175 PF00072 Response regulator receiver domain I633_08195 PF00860 Permease family I633_08205 PF01546 Peptidase family M20/M25/M40 I633_08205 PF07687 Peptidase dimerisation domain I633_08220 PF01925 Sulfite exporter TauE/SafE I633_08235 PF01425 Amidase I633_08280 PF02824 TGS domain I633_08280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain I633_08280 PF03129 Anticodon binding domain I633_08280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I633_08285 PF05198 Translation initiation factor IF-3, N-terminal domain I633_08285 PF00707 Translation initiation factor IF-3, C-terminal domain I633_08290 PF01632 Ribosomal protein L35 I633_08295 PF00453 Ribosomal protein L20 I633_08320 PF02563 Polysaccharide biosynthesis/export protein I633_08320 PF10531 SLBB domain I633_08320 PF18412 Outer-membrane lipoprotein Wza C-terminal domain I633_08325 PF13614 AAA domain I633_08375 PF01757 Acyltransferase family I633_08395 PF00535 Glycosyl transferase family 2 I633_08445 PF01757 Acyltransferase family I633_08450 PF00535 Glycosyl transferase family 2 I633_08455 PF13439 Glycosyltransferase Family 4 I633_08455 PF00534 Glycosyl transferases group 1 I633_08465 PF03808 Glycosyl transferase WecB/TagA/CpsF family I633_08475 PF01409 tRNA synthetases class II core domain (F) I633_08475 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain I633_08480 PF03483 B3/4 domain I633_08480 PF03484 tRNA synthetase B5 domain I633_08480 PF03147 Ferredoxin-fold anticodon binding domain I633_08480 PF01588 Putative tRNA binding domain I633_08480 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain I633_08485 PF00216 Bacterial DNA-binding protein I633_08495 PF04073 Aminoacyl-tRNA editing domain I633_08500 PF01804 Penicillin amidase I633_08505 PF00933 Glycosyl hydrolase family 3 N terminal domain I633_08510 PF01923 Cobalamin adenosyltransferase I633_08535 PF12704 MacB-like periplasmic core domain I633_08535 PF02687 FtsX-like permease family I633_08580 PF03372 Endonuclease/Exonuclease/phosphatase family I633_08620 PF07690 Major Facilitator Superfamily I633_08635 PF00483 Nucleotidyl transferase I633_08660 PF00682 HMGL-like I633_08665 PF00289 Biotin carboxylase, N-terminal domain I633_08665 PF00364 Biotin-requiring enzyme I633_08665 PF02785 Biotin carboxylase C-terminal domain I633_08665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain I633_08670 PF00378 Enoyl-CoA hydratase/isomerase I633_08675 PF01039 Carboxyl transferase domain I633_08680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I633_08680 PF02770 Acyl-CoA dehydrogenase, middle domain I633_08680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I633_08685 PF13411 MerR HTH family regulatory protein I633_08705 PF00266 Aminotransferase class-V I633_08710 PF17151 Periplasmic sensor domain I633_08710 PF00990 Diguanylate cyclase, GGDEF domain I633_08735 PF00672 HAMP domain I633_08735 PF00512 His Kinase A (phospho-acceptor) domain I633_08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_08735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I633_08735 PF00072 Response regulator receiver domain I633_08735 PF01627 Hpt domain I633_08740 PF01112 Asparaginase I633_08750 PF02333 Phytase I633_08810 PF10672 S-adenosylmethionine-dependent methyltransferase I633_08810 PF17785 PUA-like domain I633_08825 PF00075 RNase H I633_08830 PF00929 Exonuclease I633_08840 PF00563 EAL domain I633_08840 PF12792 CSS motif domain associated with EAL I633_08845 PF00005 ABC transporter I633_08850 PF02687 FtsX-like permease family I633_08850 PF12704 MacB-like periplasmic core domain I633_08870 PF04996 Succinylarginine dihydrolase I633_08900 PF12804 MobA-like NTP transferase domain I633_08915 PF00384 Molybdopterin oxidoreductase I633_08920 PF13673 Acetyltransferase (GNAT) domain I633_08925 PF13419 Haloacid dehalogenase-like hydrolase I633_08935 PF12111 Polyribonucleotide phosphorylase C terminal I633_08935 PF00575 S1 RNA binding domain I633_08935 PF10150 Ribonuclease E/G family I633_08940 PF00849 RNA pseudouridylate synthase I633_08940 PF01479 S4 domain I633_08955 PF02545 Maf-like protein I633_08960 PF02620 Large ribosomal RNA subunit accumulation protein YceD I633_08965 PF01783 Ribosomal L32p protein family I633_08970 PF02504 Fatty acid synthesis protein I633_08985 PF00698 Acyl transferase domain I633_08995 PF00550 Phosphopantetheine attachment site I633_09000 PF02801 Beta-ketoacyl synthase, C-terminal domain I633_09000 PF00109 Beta-ketoacyl synthase, N-terminal domain I633_09005 PF01063 Amino-transferase class IV I633_09010 PF02618 YceG-like family I633_09015 PF02223 Thymidylate kinase I633_09020 PF09115 DNA polymerase III, delta subunit, C terminal I633_09025 PF01026 TatD related DNase I633_09035 PF13460 NAD(P)H-binding I633_09040 PF00072 Response regulator receiver domain I633_09040 PF00990 Diguanylate cyclase, GGDEF domain I633_09070 PF00561 alpha/beta hydrolase fold I633_09075 PF00378 Enoyl-CoA hydratase/isomerase I633_09075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain I633_09075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain I633_09080 PF02803 Thiolase, C-terminal domain I633_09080 PF00108 Thiolase, N-terminal domain I633_09085 PF02770 Acyl-CoA dehydrogenase, middle domain I633_09085 PF12806 Acetyl-CoA dehydrogenase C-terminal like I633_09085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I633_09085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I633_09100 PF04198 Putative sugar-binding domain I633_09105 PF13419 Haloacid dehalogenase-like hydrolase I633_09115 PF01232 Mannitol dehydrogenase Rossmann domain I633_09115 PF08125 Mannitol dehydrogenase C-terminal domain I633_09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_09125 PF03466 LysR substrate binding domain I633_09130 PF01575 MaoC like domain I633_09150 PF07715 TonB-dependent Receptor Plug Domain I633_09150 PF00593 TonB dependent receptor I633_09155 PF01329 Pterin 4 alpha carbinolamine dehydratase I633_09170 PF00072 Response regulator receiver domain I633_09175 PF02576 RimP N-terminal domain I633_09175 PF17384 RimP C-terminal SH3 domain I633_09180 PF08529 NusA N-terminal domain I633_09180 PF13184 NusA-like KH domain I633_09180 PF00575 S1 RNA binding domain I633_09185 PF00009 Elongation factor Tu GTP binding domain I633_09185 PF11987 Translation-initiation factor 2 I633_09185 PF04760 Translation initiation factor IF-2, N-terminal region I633_09185 PF08364 Bacterial translation initiation factor IF-2 associated region I633_09190 PF02033 Ribosome-binding factor A I633_09195 PF01509 TruB family pseudouridylate synthase (N terminal domain) I633_09195 PF16198 tRNA pseudouridylate synthase B C-terminal domain I633_09195 PF09157 Pseudouridine synthase II TruB, C-terminal I633_09200 PF00312 Ribosomal protein S15 I633_09205 PF01479 S4 domain I633_09205 PF00849 RNA pseudouridylate synthase I633_09215 PF00795 Carbon-nitrogen hydrolase I633_09215 PF00583 Acetyltransferase (GNAT) family I633_09255 PF00578 AhpC/TSA family I633_09255 PF10417 C-terminal domain of 1-Cys peroxiredoxin I633_09260 PF13192 Thioredoxin domain I633_09260 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_09340 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_09340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I633_09350 PF13416 Bacterial extracellular solute-binding protein I633_09365 PF00005 ABC transporter I633_09370 PF01066 CDP-alcohol phosphatidyltransferase I633_09390 PF01590 GAF domain I633_09390 PF00990 Diguanylate cyclase, GGDEF domain I633_09390 PF00563 EAL domain I633_09390 PF00360 Phytochrome region I633_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_09410 PF03466 LysR substrate binding domain I633_09435 PF00005 ABC transporter I633_09500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family I633_09500 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_09505 PF01668 SmpB protein I633_09510 PF03364 Polyketide cyclase / dehydrase and lipid transport I633_09515 PF03658 RnfH family Ubiquitin I633_09535 PF07715 TonB-dependent Receptor Plug Domain I633_09535 PF00593 TonB dependent receptor I633_09555 PF03618 Kinase/pyrophosphorylase I633_09560 PF00391 PEP-utilising enzyme, mobile domain I633_09560 PF02896 PEP-utilising enzyme, TIM barrel domain I633_09560 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain I633_09570 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I633_09575 PF01799 [2Fe-2S] binding domain I633_09575 PF00111 2Fe-2S iron-sulfur cluster binding domain I633_09595 PF08007 Cupin superfamily protein I633_09600 PF00211 Adenylate and Guanylate cyclase catalytic domain I633_09615 PF04356 Protein of unknown function (DUF489) I633_09625 PF00849 RNA pseudouridylate synthase I633_09640 PF00313 'Cold-shock' DNA-binding domain I633_09645 PF02617 ATP-dependent Clp protease adaptor protein ClpS I633_09650 PF00004 ATPase family associated with various cellular activities (AAA) I633_09650 PF07724 AAA domain (Cdc48 subfamily) I633_09650 PF17871 AAA lid domain I633_09650 PF10431 C-terminal, D2-small domain, of ClpB protein I633_09650 PF02861 Clp amino terminal domain, pathogenicity island component I633_09655 PF01176 Translation initiation factor 1A / IF-1 I633_09660 PF04376 Arginine-tRNA-protein transferase, N terminus I633_09660 PF04377 Arginine-tRNA-protein transferase, C terminus I633_09665 PF03588 Leucyl/phenylalanyl-tRNA protein transferase I633_09670 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_09675 PF04217 Protein of unknown function, DUF412 I633_09680 PF10263 SprT-like family I633_09685 PF01343 Peptidase family S49 I633_09700 PF00881 Nitroreductase family I633_09710 PF00710 Asparaginase, N-terminal I633_09710 PF17763 Glutaminase/Asparaginase C-terminal domain I633_09715 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family I633_09715 PF04055 Radical SAM superfamily I633_09720 PF03099 Biotin/lipoate A/B protein ligase family I633_09725 PF04359 Protein of unknown function (DUF493) I633_09730 PF07943 Penicillin-binding protein 5, C-terminal domain I633_09730 PF00768 D-alanyl-D-alanine carboxypeptidase I633_09745 PF01098 Cell cycle protein I633_09765 PF02590 Predicted SPOUT methyltransferase I633_09775 PF01467 Cytidylyltransferase-like I633_09780 PF06144 DNA polymerase III, delta subunit I633_09780 PF14840 Processivity clamp loader gamma complex DNA pol III C-term I633_09785 PF04390 Lipopolysaccharide-assembly I633_09790 PF13603 Leucyl-tRNA synthetase, Domain 2 I633_09790 PF00133 tRNA synthetases class I (I, L, M and V) I633_09790 PF08264 Anticodon-binding domain of tRNA I633_09795 PF05362 Lon protease (S16) C-terminal proteolytic domain I633_09795 PF13654 AAA domain I633_09800 PF12697 Alpha/beta hydrolase family I633_09805 PF00990 Diguanylate cyclase, GGDEF domain I633_09810 PF00106 short chain dehydrogenase I633_09815 PF01985 CRS1 / YhbY (CRM) domain I633_09820 PF01728 FtsJ-like methyltransferase I633_09825 PF01434 Peptidase family M41 I633_09825 PF00004 ATPase family associated with various cellular activities (AAA) I633_09825 PF17862 AAA+ lid domain I633_09825 PF06480 FtsH Extracellular I633_09830 PF00809 Pterin binding enzyme I633_09835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III I633_09835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain I633_09835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II I633_09835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I I633_09840 PF00121 Triosephosphate isomerase I633_09845 PF03840 Preprotein translocase SecG subunit I633_09850 PF13188 PAS domain I633_09850 PF03707 Bacterial signalling protein N terminal repeat I633_09850 PF00990 Diguanylate cyclase, GGDEF domain I633_09850 PF00563 EAL domain I633_09855 PF01679 Proteolipid membrane potential modulator I633_09865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain I633_09865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I633_09875 PF00781 Diacylglycerol kinase catalytic domain I633_09875 PF02142 MGS-like domain I633_09905 PF00474 Sodium:solute symporter family I633_09930 PF00575 S1 RNA binding domain I633_09930 PF01138 3' exoribonuclease family, domain 1 I633_09930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain I633_09930 PF00013 KH domain I633_09930 PF03725 3' exoribonuclease family, domain 2 I633_09995 PF01527 Transposase I633_10010 PF02567 Phenazine biosynthesis-like protein I633_10095 PF03544 Gram-negative bacterial TonB protein C-terminal I633_10115 PF07719 Tetratricopeptide repeat I633_10115 PF13181 Tetratricopeptide repeat I633_10135 PF06470 SMC proteins Flexible Hinge Domain I633_10135 PF02463 RecF/RecN/SMC N terminal domain I633_10140 PF04354 ZipA, C-terminal FtsZ-binding domain I633_10145 PF03120 NAD-dependent DNA ligase OB-fold domain I633_10145 PF03119 NAD-dependent DNA ligase C4 zinc finger domain I633_10145 PF00533 BRCA1 C Terminus (BRCT) domain I633_10145 PF12826 Helix-hairpin-helix motif I633_10145 PF01653 NAD-dependent DNA ligase adenylation domain I633_10165 PF00005 ABC transporter I633_10165 PF00664 ABC transporter transmembrane region I633_10170 PF02606 Tetraacyldisaccharide-1-P 4'-kinase I633_10175 PF03966 Trm112p-like protein I633_10180 PF02348 Cytidylyltransferase I633_10190 PF00919 Uncharacterized protein family UPF0004 I633_10190 PF04055 Radical SAM superfamily I633_10190 PF18693 TRAM domain I633_10205 PF00899 ThiF family I633_10210 PF13409 Glutathione S-transferase, N-terminal domain I633_10215 PF02678 Pirin I633_10215 PF05726 Pirin C-terminal cupin domain I633_10220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I I633_10220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain I633_10220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II I633_10220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III I633_10230 PF00285 Citrate synthase, C-terminal domain I633_10235 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit I633_10240 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit I633_10245 PF02910 Fumarate reductase flavoprotein C-term I633_10245 PF00890 FAD binding domain I633_10250 PF13085 2Fe-2S iron-sulfur cluster binding domain I633_10255 PF00676 Dehydrogenase E1 component I633_10255 PF16870 2-oxoglutarate dehydrogenase C-terminal I633_10255 PF02779 Transketolase, pyrimidine binding domain I633_10255 PF16078 2-oxoglutarate dehydrogenase N-terminus I633_10260 PF02817 e3 binding domain I633_10260 PF00364 Biotin-requiring enzyme I633_10260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) I633_10275 PF02629 CoA binding domain I633_10275 PF00549 CoA-ligase I633_10290 PF04820 Tryptophan halogenase I633_10325 PF01434 Peptidase family M41 I633_10325 PF00004 ATPase family associated with various cellular activities (AAA) I633_10325 PF17862 AAA+ lid domain I633_10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_10345 PF00512 His Kinase A (phospho-acceptor) domain I633_10350 PF00512 His Kinase A (phospho-acceptor) domain I633_10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_10350 PF08448 PAS fold I633_10350 PF13188 PAS domain I633_10350 PF00072 Response regulator receiver domain I633_10365 PF07690 Major Facilitator Superfamily I633_10395 PF00128 Alpha amylase, catalytic domain I633_10395 PF10438 Cyclo-malto-dextrinase C-terminal domain I633_10395 PF09087 Cyclomaltodextrinase, N-terminal I633_10405 PF01833 IPT/TIG domain I633_10405 PF02806 Alpha amylase, C-terminal all-beta domain I633_10405 PF00686 Starch binding domain I633_10405 PF00128 Alpha amylase, catalytic domain I633_10410 PF00356 Bacterial regulatory proteins, lacI family I633_10415 PF00749 tRNA synthetases class I (E and Q), catalytic domain I633_10415 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain I633_10420 PF00106 short chain dehydrogenase I633_10425 PF12262 Bacterial virulence factor lipase N-terminal I633_10430 PF01804 Penicillin amidase I633_10435 PF08496 Peptidase family S49 N-terminal I633_10435 PF01343 Peptidase family S49 I633_10450 PF01784 NIF3 (NGG1p interacting factor 3) I633_10460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I633_10460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I633_10465 PF00255 Glutathione peroxidase I633_10470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase I633_10470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase I633_10490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I633_10490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I633_10490 PF02770 Acyl-CoA dehydrogenase, middle domain I633_10495 PF00378 Enoyl-CoA hydratase/isomerase I633_10505 PF13847 Methyltransferase domain I633_10515 PF00884 Sulfatase I633_10515 PF11893 Domain of unknown function (DUF3413) I633_10520 PF07208 Protein of unknown function (DUF1414) I633_10525 PF04245 37-kD nucleoid-associated bacterial protein I633_10555 PF07694 5TMR of 5TMR-LYT I633_10555 PF06580 Histidine kinase I633_10560 PF04397 LytTr DNA-binding domain I633_10560 PF00072 Response regulator receiver domain I633_10565 PF00365 Phosphofructokinase I633_10585 PF16123 Hydroxyacylglutathione hydrolase C-terminus I633_10585 PF00753 Metallo-beta-lactamase superfamily I633_10605 PF00512 His Kinase A (phospho-acceptor) domain I633_10605 PF01627 Hpt domain I633_10605 PF00072 Response regulator receiver domain I633_10605 PF00497 Bacterial extracellular solute-binding proteins, family 3 I633_10605 PF00989 PAS fold I633_10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_10625 PF00271 Helicase conserved C-terminal domain I633_10625 PF00270 DEAD/DEAH box helicase I633_10630 PF01144 Coenzyme A transferase I633_10635 PF01144 Coenzyme A transferase I633_10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_10640 PF03466 LysR substrate binding domain I633_10655 PF03466 LysR substrate binding domain I633_10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_10660 PF03315 Serine dehydratase beta chain I633_10660 PF03313 Serine dehydratase alpha chain I633_10665 PF00293 NUDIX domain I633_10670 PF04715 Anthranilate synthase component I, N terminal region I633_10670 PF00425 chorismate binding enzyme I633_10685 PF02646 RmuC family I633_10700 PF00676 Dehydrogenase E1 component I633_10705 PF02780 Transketolase, C-terminal domain I633_10705 PF02779 Transketolase, pyrimidine binding domain I633_10710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) I633_10710 PF02817 e3 binding domain I633_10710 PF00364 Biotin-requiring enzyme I633_10745 PF00132 Bacterial transferase hexapeptide (six repeats) I633_10765 PF13185 GAF domain I633_10775 PF17516 ProQ C-terminal domain I633_10775 PF04352 ProQ/FINO family I633_10790 PF00209 Sodium:neurotransmitter symporter family I633_10800 PF11940 Domain of unknown function (DUF3458) Ig-like fold I633_10800 PF17432 Domain of unknown function (DUF3458_C) ARM repeats I633_10800 PF01433 Peptidase family M1 domain I633_10815 PF07044 Protein of unknown function (DUF1329) I633_10840 PF01180 Dihydroorotate dehydrogenase I633_10870 PF04957 Ribosome modulation factor I633_10890 PF00875 DNA photolyase I633_10890 PF03441 FAD binding domain of DNA photolyase I633_10905 PF00875 DNA photolyase I633_10905 PF03441 FAD binding domain of DNA photolyase I633_10910 PF04244 Deoxyribodipyrimidine photo-lyase-related protein I633_10930 PF13700 Domain of unknown function (DUF4158) I633_10930 PF01526 Tn3 transposase DDE domain I633_10945 PF13411 MerR HTH family regulatory protein I633_10960 PF00529 HlyD membrane-fusion protein of T1SS I633_10960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I633_10985 PF00753 Metallo-beta-lactamase superfamily I633_10990 PF01925 Sulfite exporter TauE/SafE I633_11025 PF01545 Cation efflux family I633_11025 PF16916 Dimerisation domain of Zinc Transporter I633_11045 PF00873 AcrB/AcrD/AcrF family I633_11050 PF07715 TonB-dependent Receptor Plug Domain I633_11050 PF07660 Secretin and TonB N terminus short domain I633_11050 PF00593 TonB dependent receptor I633_11055 PF00873 AcrB/AcrD/AcrF family I633_11085 PF13411 MerR HTH family regulatory protein I633_11090 PF02411 MerT mercuric transport protein I633_11095 PF00403 Heavy-metal-associated domain I633_11110 PF02899 Phage integrase, N-terminal SAM-like domain I633_11110 PF00589 Phage integrase family I633_11120 PF01219 Prokaryotic diacylglycerol kinase I633_11125 PF00582 Universal stress protein family I633_11135 PF01645 Conserved region in glutamate synthase I633_11140 PF00999 Sodium/hydrogen exchanger family I633_11145 PF00210 Ferritin-like domain I633_11150 PF00210 Ferritin-like domain I633_11180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III I633_11180 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP I633_11210 PF00027 Cyclic nucleotide-binding domain I633_11210 PF13545 Crp-like helix-turn-helix domain I633_11215 PF00582 Universal stress protein family I633_11220 PF01171 PP-loop family I633_11225 PF01734 Patatin-like phospholipase I633_11245 PF01810 LysE type translocator I633_11250 PF02146 Sir2 family I633_11255 PF00581 Rhodanese-like domain I633_11260 PF08534 Redoxin I633_11270 PF01066 CDP-alcohol phosphatidyltransferase I633_11275 PF02151 UvrB/uvrC motif I633_11275 PF08459 UvrC Helix-hairpin-helix N-terminal I633_11275 PF01541 GIY-YIG catalytic domain I633_11290 PF00155 Aminotransferase class I and II I633_11295 PF12867 DinB superfamily I633_11295 PF03781 Sulfatase-modifying factor enzyme 1 I633_11305 PF07681 DoxX I633_11310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_11310 PF03466 LysR substrate binding domain I633_11325 PF01027 Inhibitor of apoptosis-promoting Bax1 I633_11330 PF02635 DsrE/DsrF-like family I633_11345 PF04358 DsrC like protein I633_11365 PF07715 TonB-dependent Receptor Plug Domain I633_11365 PF00593 TonB dependent receptor I633_11365 PF07715 TonB-dependent Receptor Plug Domain I633_11365 PF00593 TonB dependent receptor I633_11370 PF02403 Seryl-tRNA synthetase N-terminal domain I633_11370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I633_11375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) I633_11380 PF16193 AAA C-terminal domain I633_11380 PF00004 ATPase family associated with various cellular activities (AAA) I633_11380 PF12002 MgsA AAA+ ATPase C terminal I633_11400 PF01037 Lrp/AsnC ligand binding domain I633_11405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain I633_11405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain I633_11410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family I633_11415 PF18073 Rubredoxin metal binding domain I633_11430 PF00216 Bacterial DNA-binding protein I633_11435 PF00575 S1 RNA binding domain I633_11440 PF02224 Cytidylate kinase I633_11445 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) I633_11450 PF00266 Aminotransferase class-V I633_11455 PF00521 DNA gyrase/topoisomerase IV, subunit A I633_11455 PF03989 DNA gyrase C-terminal domain, beta-propeller I633_11475 PF00268 Ribonucleotide reductase, small chain I633_11480 PF00111 2Fe-2S iron-sulfur cluster binding domain I633_11520 PF01259 SAICAR synthetase I633_11525 PF06804 NlpB/DapX lipoprotein I633_11530 PF00701 Dihydrodipicolinate synthetase family I633_11540 PF00578 AhpC/TSA family I633_11545 PF01594 AI-2E family transporter I633_11550 PF01435 Peptidase family M48 I633_11560 PF03960 ArsC family I633_11565 PF03358 NADPH-dependent FMN reductase I633_11575 PF00308 Bacterial dnaA protein I633_11585 PF00586 AIR synthase related protein, N-terminal domain I633_11585 PF02769 AIR synthase related protein, C-terminal domain I633_11590 PF00551 Formyl transferase I633_11615 PF00072 Response regulator receiver domain I633_11615 PF00196 Bacterial regulatory proteins, luxR family I633_11620 PF13649 Methyltransferase domain I633_11625 PF08003 Protein of unknown function (DUF1698) I633_11630 PF00485 Phosphoribulokinase / Uridine kinase family I633_11655 PF13419 Haloacid dehalogenase-like hydrolase I633_11660 PF03453 MoeA N-terminal region (domain I and II) I633_11660 PF00994 Probable molybdopterin binding domain I633_11660 PF03454 MoeA C-terminal region (domain IV) I633_11685 PF17862 AAA+ lid domain I633_11685 PF01434 Peptidase family M41 I633_11685 PF00004 ATPase family associated with various cellular activities (AAA) I633_11690 PF00291 Pyridoxal-phosphate dependent enzyme I633_11715 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system I633_11765 PF02567 Phenazine biosynthesis-like protein I633_11780 PF00378 Enoyl-CoA hydratase/isomerase I633_11795 PF00255 Glutathione peroxidase I633_11800 PF02525 Flavodoxin-like fold I633_11810 PF01053 Cys/Met metabolism PLP-dependent enzyme I633_11845 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 I633_11865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I633_11865 PF02770 Acyl-CoA dehydrogenase, middle domain I633_11865 PF12806 Acetyl-CoA dehydrogenase C-terminal like I633_11865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I633_11870 PF07883 Cupin domain I633_11870 PF12833 Helix-turn-helix domain I633_11875 PF00593 TonB dependent receptor I633_11875 PF07715 TonB-dependent Receptor Plug Domain I633_11885 PF00326 Prolyl oligopeptidase family I633_11885 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain I633_11890 PF00873 AcrB/AcrD/AcrF family I633_11895 PF13533 Biotin-lipoyl like I633_11905 PF00766 Electron transfer flavoprotein FAD-binding domain I633_11905 PF01012 Electron transfer flavoprotein domain I633_11910 PF01012 Electron transfer flavoprotein domain I633_11920 PF00816 H-NS histone family I633_11925 PF00561 alpha/beta hydrolase fold I633_11930 PF00258 Flavodoxin I633_11935 PF00672 HAMP domain I633_11935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_11940 PF01475 Ferric uptake regulator family I633_11955 PF02626 Carboxyltransferase domain, subdomain A and B I633_11960 PF02682 Carboxyltransferase domain, subdomain C and D I633_11965 PF03746 LamB/YcsF family I633_11970 PF17783 CvfB-like winged helix domain I633_11970 PF13509 S1 domain I633_11980 PF13533 Biotin-lipoyl like I633_11985 PF00873 AcrB/AcrD/AcrF family I633_11990 PF00873 AcrB/AcrD/AcrF family I633_12005 PF00155 Aminotransferase class I and II I633_12035 PF01799 [2Fe-2S] binding domain I633_12035 PF00111 2Fe-2S iron-sulfur cluster binding domain I633_12060 PF12146 Serine aminopeptidase, S33 I633_12065 PF12833 Helix-turn-helix domain I633_12065 PF06719 AraC-type transcriptional regulator N-terminus I633_12070 PF00665 Integrase core domain I633_12100 PF13286 Phosphohydrolase-associated domain I633_12100 PF01966 HD domain I633_12105 PF00174 Oxidoreductase molybdopterin binding domain I633_12110 PF01794 Ferric reductase like transmembrane component I633_12125 PF02810 SEC-C motif I633_12135 PF00107 Zinc-binding dehydrogenase I633_12135 PF08240 Alcohol dehydrogenase GroES-like domain I633_12145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I633_12145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I633_12145 PF02770 Acyl-CoA dehydrogenase, middle domain I633_12160 PF07715 TonB-dependent Receptor Plug Domain I633_12160 PF00593 TonB dependent receptor I633_12180 PF06969 HemN C-terminal domain I633_12180 PF04055 Radical SAM superfamily I633_12185 PF00005 ABC transporter I633_12185 PF03459 TOBE domain I633_12190 PF00528 Binding-protein-dependent transport system inner membrane component I633_12200 PF02391 MoaE protein I633_12205 PF02597 ThiS family I633_12210 PF01967 MoaC family I633_12215 PF00994 Probable molybdopterin binding domain I633_12220 PF00899 ThiF family I633_12230 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system I633_12235 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system I633_12260 PF03435 Saccharopine dehydrogenase NADP binding domain I633_12285 PF08267 Cobalamin-independent synthase, N-terminal domain I633_12285 PF01717 Cobalamin-independent synthase, Catalytic domain I633_12290 PF07715 TonB-dependent Receptor Plug Domain I633_12290 PF00593 TonB dependent receptor I633_12300 PF00892 EamA-like transporter family I633_12335 PF17946 RecC C-terminal domain I633_12350 PF00501 AMP-binding enzyme I633_12365 PF17770 Ribonuclease J C-terminal domain I633_12365 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain I633_12365 PF12706 Beta-lactamase superfamily domain I633_12380 PF03466 LysR substrate binding domain I633_12380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_12400 PF01022 Bacterial regulatory protein, arsR family I633_12410 PF03466 LysR substrate binding domain I633_12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_12420 PF00072 Response regulator receiver domain I633_12420 PF02954 Bacterial regulatory protein, Fis family I633_12420 PF00158 Sigma-54 interaction domain I633_12430 PF08446 PAS fold I633_12430 PF00360 Phytochrome region I633_12430 PF01590 GAF domain I633_12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_12430 PF00512 His Kinase A (phospho-acceptor) domain I633_12435 PF00072 Response regulator receiver domain I633_12440 PF09308 LuxQ, periplasmic I633_12440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_12440 PF00072 Response regulator receiver domain I633_12440 PF00512 His Kinase A (phospho-acceptor) domain I633_12470 PF07043 Protein of unknown function (DUF1328) I633_12490 PF07023 Protein of unknown function (DUF1315) I633_12505 PF01235 Sodium:alanine symporter family I633_12520 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain I633_12520 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I633_12530 PF01641 SelR domain I633_12535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain I633_12535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase I633_12540 PF00128 Alpha amylase, catalytic domain I633_12540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) I633_12555 PF02446 4-alpha-glucanotransferase I633_12560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain I633_12560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I633_12565 PF01263 Aldose 1-epimerase I633_12570 PF01081 KDPG and KHG aldolase I633_12575 PF02685 Glucokinase I633_12580 PF00920 Dehydratase family I633_12585 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase I633_12590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain I633_12590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain I633_12595 PF01418 Helix-turn-helix domain, rpiR family I633_12595 PF01380 SIS domain I633_12600 PF00224 Pyruvate kinase, barrel domain I633_12600 PF02887 Pyruvate kinase, alpha/beta domain I633_12630 PF04972 BON domain I633_12660 PF09347 Domain of unknown function (DUF1989) I633_12685 PF04962 KduI/IolB family I633_12690 PF03480 Bacterial extracellular solute-binding protein, family 7 I633_12695 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component I633_12700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component I633_12705 PF00356 Bacterial regulatory proteins, lacI family I633_12710 PF08666 SAF domain I633_12710 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus I633_12715 PF02614 Glucuronate isomerase I633_12740 PF00294 pfkB family carbohydrate kinase I633_12745 PF13472 GDSL-like Lipase/Acylhydrolase family I633_12770 PF00295 Glycosyl hydrolases family 28 I633_12785 PF00512 His Kinase A (phospho-acceptor) domain I633_12785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I633_12785 PF00072 Response regulator receiver domain I633_12785 PF00672 HAMP domain I633_12785 PF01627 Hpt domain I633_12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_12810 PF00672 HAMP domain I633_12810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_12810 PF02743 Cache domain I633_12825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_12825 PF03466 LysR substrate binding domain I633_12830 PF00465 Iron-containing alcohol dehydrogenase I633_12835 PF03707 Bacterial signalling protein N terminal repeat I633_12835 PF00563 EAL domain I633_12835 PF00990 Diguanylate cyclase, GGDEF domain I633_12845 PF11849 Domain of unknown function (DUF3369) I633_12850 PF00497 Bacterial extracellular solute-binding proteins, family 3 I633_12850 PF00512 His Kinase A (phospho-acceptor) domain I633_12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_12870 PF00692 dUTPase I633_12875 PF10609 NUBPL iron-transfer P-loop NTPase I633_12880 PF09334 tRNA synthetases class I (M) I633_12880 PF01588 Putative tRNA binding domain I633_12880 PF08264 Anticodon-binding domain of tRNA I633_12885 PF05552 Conserved TM helix I633_12885 PF00924 Mechanosensitive ion channel I633_12890 PF08241 Methyltransferase domain I633_12895 PF16123 Hydroxyacylglutathione hydrolase C-terminus I633_12895 PF00753 Metallo-beta-lactamase superfamily I633_12900 PF01476 LysM domain I633_12900 PF01464 Transglycosylase SLT domain I633_12920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD I633_12925 PF00149 Calcineurin-like phosphoesterase I633_12935 PF01145 SPFH domain / Band 7 family I633_12935 PF15975 Flotillin I633_12945 PF00128 Alpha amylase, catalytic domain I633_12950 PF01638 HxlR-like helix-turn-helix I633_12955 PF08240 Alcohol dehydrogenase GroES-like domain I633_12955 PF00107 Zinc-binding dehydrogenase I633_12960 PF18011 C-terminal domain found in long catalases I633_12960 PF06628 Catalase-related immune-responsive I633_12960 PF00199 Catalase I633_12965 PF08240 Alcohol dehydrogenase GroES-like domain I633_12965 PF00107 Zinc-binding dehydrogenase I633_12990 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) I633_13000 PF00156 Phosphoribosyl transferase domain I633_13005 PF02674 Colicin V production protein I633_13010 PF05036 Sporulation related domain I633_13015 PF02875 Mur ligase family, glutamate ligase domain I633_13015 PF08245 Mur ligase middle domain I633_13020 PF17848 Acetyl-coA carboxylase zinc finger domain I633_13020 PF01039 Carboxyl transferase domain I633_13025 PF01416 tRNA pseudouridine synthase I633_13035 PF02774 Semialdehyde dehydrogenase, dimerisation domain I633_13035 PF01118 Semialdehyde dehydrogenase, NAD binding domain I633_13040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I633_13040 PF11890 Domain of unknown function (DUF3410) I633_13040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I633_13045 PF00596 Class II Aldolase and Adducin N-terminal domain I633_13060 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH I633_13065 PF02801 Beta-ketoacyl synthase, C-terminal domain I633_13065 PF00109 Beta-ketoacyl synthase, N-terminal domain I633_13070 PF00501 AMP-binding enzyme I633_13070 PF13193 AMP-binding enzyme C-terminal domain I633_13080 PF01266 FAD dependent oxidoreductase I633_13080 PF05430 S-adenosyl-L-methionine-dependent methyltransferase I633_13130 PF08240 Alcohol dehydrogenase GroES-like domain I633_13130 PF00107 Zinc-binding dehydrogenase I633_13160 PF02667 Short chain fatty acid transporter I633_13175 PF02627 Carboxymuconolactone decarboxylase family I633_13180 PF00675 Insulinase (Peptidase family M16) I633_13180 PF05193 Peptidase M16 inactive domain I633_13195 PF04315 Elongation factor P hydroxylase I633_13220 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_13220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family I633_13225 PF00378 Enoyl-CoA hydratase/isomerase I633_13230 PF02909 Tetracyclin repressor-like, C-terminal domain I633_13230 PF00440 Bacterial regulatory proteins, tetR family I633_13235 PF00732 GMC oxidoreductase I633_13235 PF05199 GMC oxidoreductase I633_13260 PF04286 Protein of unknown function (DUF445) I633_13285 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain I633_13285 PF00326 Prolyl oligopeptidase family I633_13300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) I633_13305 PF02600 Disulfide bond formation protein DsbB I633_13310 PF13302 Acetyltransferase (GNAT) domain I633_13325 PF03692 Putative zinc- or iron-chelating domain I633_13330 PF01557 Fumarylacetoacetate (FAA) hydrolase family I633_13340 PF05166 YcgL domain I633_13345 PF01612 3'-5' exonuclease I633_13345 PF00570 HRDC domain I633_13350 PF00501 AMP-binding enzyme I633_13350 PF13193 AMP-binding enzyme C-terminal domain I633_13355 PF12697 Alpha/beta hydrolase family I633_13370 PF00814 Glycoprotease family I633_13410 PF00128 Alpha amylase, catalytic domain I633_13455 PF00593 TonB dependent receptor I633_13455 PF07715 TonB-dependent Receptor Plug Domain I633_13465 PF01634 ATP phosphoribosyltransferase I633_13465 PF08029 HisG, C-terminal domain I633_13470 PF00815 Histidinol dehydrogenase I633_13475 PF00155 Aminotransferase class I and II I633_13490 PF00117 Glutamine amidotransferase class-I I633_13495 PF00977 Histidine biosynthesis protein I633_13500 PF00977 Histidine biosynthesis protein I633_13505 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase I633_13505 PF01502 Phosphoribosyl-AMP cyclohydrolase I633_13520 PF00672 HAMP domain I633_13520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_13535 PF07715 TonB-dependent Receptor Plug Domain I633_13535 PF00593 TonB dependent receptor I633_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_13555 PF00183 Hsp90 protein I633_13560 PF02132 RecR protein I633_13560 PF13662 Toprim domain I633_13570 PF00360 Phytochrome region I633_13570 PF08446 PAS fold I633_13570 PF00512 His Kinase A (phospho-acceptor) domain I633_13570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_13570 PF01590 GAF domain I633_13575 PF02575 YbaB/EbfC DNA-binding family I633_13580 PF12169 DNA polymerase III subunits gamma and tau domain III I633_13580 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding I633_13580 PF12170 DNA polymerase III tau subunit V interacting with alpha I633_13585 PF00156 Phosphoribosyl transferase domain I633_13595 PF05114 Protein of unknown function (DUF692) I633_13605 PF00005 ABC transporter I633_13605 PF02687 FtsX-like permease family I633_13605 PF12704 MacB-like periplasmic core domain I633_13615 PF01066 CDP-alcohol phosphatidyltransferase I633_13635 PF09330 D-lactate dehydrogenase, membrane binding I633_13635 PF01565 FAD binding domain I633_13640 PF07724 AAA domain (Cdc48 subfamily) I633_13640 PF02861 Clp amino terminal domain, pathogenicity island component I633_13640 PF17871 AAA lid domain I633_13640 PF00004 ATPase family associated with various cellular activities (AAA) I633_13640 PF10431 C-terminal, D2-small domain, of ClpB protein I633_13650 PF00849 RNA pseudouridylate synthase I633_13650 PF01479 S4 domain I633_13655 PF13525 Outer membrane lipoprotein I633_13665 PF04542 Sigma-70 region 2 I633_13665 PF04545 Sigma-70, region 4 I633_13680 PF00106 short chain dehydrogenase I633_13700 PF13677 Membrane MotB of proton-channel complex MotA/MotB I633_13700 PF00691 OmpA family I633_13705 PF01618 MotA/TolQ/ExbB proton channel family I633_13710 PF02609 Exonuclease VII small subunit I633_13725 PF02780 Transketolase, C-terminal domain I633_13725 PF02779 Transketolase, pyrimidine binding domain I633_13725 PF13292 1-deoxy-D-xylulose-5-phosphate synthase I633_13730 PF04608 Phosphatidylglycerophosphatase A I633_13735 PF00586 AIR synthase related protein, N-terminal domain I633_13735 PF02769 AIR synthase related protein, C-terminal domain I633_13740 PF01029 NusB family I633_13745 PF00885 6,7-dimethyl-8-ribityllumazine synthase I633_13750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase I633_13750 PF00925 GTP cyclohydrolase II I633_13755 PF00677 Lumazine binding domain I633_13760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region I633_13760 PF01872 RibD C-terminal domain I633_13765 PF03477 ATP cone domain I633_13770 PF00464 Serine hydroxymethyltransferase I633_13795 PF18073 Rubredoxin metal binding domain I633_13820 PF01026 TatD related DNase I633_13825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region I633_13825 PF01243 Pyridoxamine 5'-phosphate oxidase I633_13830 PF01926 50S ribosome-binding GTPase I633_13830 PF07650 KH domain I633_13835 PF00035 Double-stranded RNA binding motif I633_13835 PF14622 Ribonuclease-III-like I633_13840 PF10502 Signal peptidase, peptidase S26 I633_13860 PF17188 MucB/RseB C-terminal domain I633_13860 PF03888 MucB/RseB N-terminal domain I633_13870 PF08281 Sigma-70, region 4 I633_13870 PF04542 Sigma-70 region 2 I633_13880 PF00890 FAD binding domain I633_13880 PF02910 Fumarate reductase flavoprotein C-term I633_13895 PF03937 Flavinator of succinate dehydrogenase I633_13910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I633_13915 PF00543 Nitrogen regulatory protein P-II I633_13920 PF02540 NAD synthase I633_13955 PF07963 Prokaryotic N-terminal methylation motif I633_13955 PF00114 Pilin (bacterial filament) I633_13990 PF02401 LytB protein I633_14005 PF01252 Signal peptidase (SPase) II I633_14020 PF06574 FAD synthetase I633_14020 PF01687 Riboflavin kinase I633_14025 PF03023 Lipid II flippase MurJ I633_14030 PF01649 Ribosomal protein S20 I633_14035 PF00106 short chain dehydrogenase I633_14050 PF01758 Sodium Bile acid symporter family I633_14055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_14055 PF03466 LysR substrate binding domain I633_14080 PF07687 Peptidase dimerisation domain I633_14080 PF01546 Peptidase family M20/M25/M40 I633_14090 PF13145 PPIC-type PPIASE domain I633_14095 PF00216 Bacterial DNA-binding protein I633_14100 PF02190 ATP-dependent protease La (LON) substrate-binding domain I633_14100 PF05362 Lon protease (S16) C-terminal proteolytic domain I633_14100 PF00004 ATPase family associated with various cellular activities (AAA) I633_14115 PF00574 Clp protease I633_14120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I633_14120 PF05698 Bacterial trigger factor protein (TF) C-terminus I633_14120 PF05697 Bacterial trigger factor protein (TF) I633_14130 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain I633_14130 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain I633_14140 PF18389 TrmO C-terminal domain I633_14140 PF01980 tRNA-methyltransferase O I633_14145 PF03129 Anticodon binding domain I633_14145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I633_14150 PF12706 Beta-lactamase superfamily domain I633_14150 PF00753 Metallo-beta-lactamase superfamily I633_14155 PF02253 Phospholipase A1 I633_14160 PF00850 Histone deacetylase domain I633_14165 PF02743 Cache domain I633_14165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_14165 PF00672 HAMP domain I633_14170 PF00117 Glutamine amidotransferase class-I I633_14170 PF02540 NAD synthase I633_14170 PF00958 GMP synthase C terminal domain I633_14175 PF00571 CBS domain I633_14175 PF00478 IMP dehydrogenase / GMP reductase domain I633_14180 PF13742 OB-fold nucleic acid binding domain I633_14180 PF02601 Exonuclease VII, large subunit I633_14205 PF13360 PQQ-like domain I633_14210 PF09976 Tetratricopeptide repeat-like domain I633_14215 PF13393 Histidyl-tRNA synthetase I633_14215 PF03129 Anticodon binding domain I633_14220 PF04551 GcpE protein I633_14225 PF13464 Domain of unknown function (DUF4115) I633_14235 PF04055 Radical SAM superfamily I633_14240 PF00334 Nucleoside diphosphate kinase I633_14245 PF02657 Fe-S metabolism associated domain I633_14250 PF01883 Iron-sulfur cluster assembly protein I633_14255 PF01521 Iron-sulphur cluster biosynthesis I633_14270 PF01458 Uncharacterized protein family (UPF0051) I633_14275 PF00005 ABC transporter I633_14280 PF01458 Uncharacterized protein family (UPF0051) I633_14285 PF00266 Aminotransferase class-V I633_14290 PF02082 Transcriptional regulator I633_14295 PF00743 Flavin-binding monooxygenase-like I633_14310 PF00588 SpoU rRNA Methylase family I633_14315 PF00459 Inositol monophosphatase family I633_14335 PF07549 SecD/SecF GG Motif I633_14335 PF02355 Protein export membrane protein I633_14340 PF07549 SecD/SecF GG Motif I633_14340 PF02355 Protein export membrane protein I633_14340 PF13721 SecD export protein N-terminal TM region I633_14345 PF02699 Preprotein translocase subunit I633_14350 PF01702 Queuine tRNA-ribosyltransferase I633_14355 PF02547 Queuosine biosynthesis protein I633_14370 PF04012 PspA/IM30 family I633_14375 PF07885 Ion channel I633_14425 PF00005 ABC transporter I633_14440 PF04960 Glutaminase I633_14445 PF00245 Alkaline phosphatase I633_14450 PF00072 Response regulator receiver domain I633_14455 PF00463 Isocitrate lyase family I633_14460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_14460 PF03466 LysR substrate binding domain I633_14465 PF01274 Malate synthase I633_14475 PF01370 NAD dependent epimerase/dehydratase family I633_14500 PF17820 PDZ domain I633_14500 PF13180 PDZ domain I633_14520 PF00534 Glycosyl transferases group 1 I633_14520 PF13439 Glycosyltransferase Family 4 I633_14540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain I633_14540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain I633_14540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain I633_14545 PF02350 UDP-N-acetylglucosamine 2-epimerase I633_14580 PF00672 HAMP domain I633_14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_14580 PF00512 His Kinase A (phospho-acceptor) domain I633_14585 PF00872 Transposase, Mutator family I633_14595 PF13439 Glycosyltransferase Family 4 I633_14595 PF00534 Glycosyl transferases group 1 I633_14600 PF01757 Acyltransferase family I633_14610 PF13537 Glutamine amidotransferase domain I633_14610 PF00733 Asparagine synthase I633_14625 PF01943 Polysaccharide biosynthesis protein I633_14640 PF00535 Glycosyl transferase family 2 I633_14655 PF13537 Glutamine amidotransferase domain I633_14655 PF00733 Asparagine synthase I633_14670 PF01522 Polysaccharide deacetylase I633_14675 PF02397 Bacterial sugar transferase I633_14690 PF13614 AAA domain I633_14700 PF13401 AAA domain I633_14700 PF01471 Putative peptidoglycan binding domain I633_14715 PF01541 GIY-YIG catalytic domain I633_14730 PF08335 GlnD PII-uridylyltransferase I633_14730 PF03710 Glutamate-ammonia ligase adenylyltransferase I633_14740 PF03279 Bacterial lipid A biosynthesis acyltransferase I633_14765 PF07715 TonB-dependent Receptor Plug Domain I633_14765 PF00593 TonB dependent receptor I633_14765 PF04886 PT repeat I633_14775 PF00990 Diguanylate cyclase, GGDEF domain I633_14775 PF03707 Bacterial signalling protein N terminal repeat I633_14775 PF13188 PAS domain I633_14775 PF00563 EAL domain I633_14780 PF00265 Thymidine kinase I633_14790 PF00356 Bacterial regulatory proteins, lacI family I633_14830 PF01926 50S ribosome-binding GTPase I633_14835 PF00588 SpoU rRNA Methylase family I633_14835 PF08032 RNA 2'-O ribose methyltransferase substrate binding I633_14870 PF05199 GMC oxidoreductase I633_14870 PF00732 GMC oxidoreductase I633_14885 PF05971 RNA methyltransferase I633_14910 PF02770 Acyl-CoA dehydrogenase, middle domain I633_14910 PF18158 Adaptive response protein AidB N-terminal domain I633_14910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I633_14930 PF00072 Response regulator receiver domain I633_14930 PF00486 Transcriptional regulatory protein, C terminal I633_14935 PF00672 HAMP domain I633_14935 PF16527 Two-component sensor protein CpxA, periplasmic domain I633_14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_14935 PF00512 His Kinase A (phospho-acceptor) domain I633_14945 PF03965 Penicillinase repressor I633_14950 PF03544 Gram-negative bacterial TonB protein C-terminal I633_14970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I633_14980 PF01799 [2Fe-2S] binding domain I633_14980 PF00111 2Fe-2S iron-sulfur cluster binding domain I633_14985 PF00941 FAD binding domain in molybdopterin dehydrogenase I633_14985 PF03450 CO dehydrogenase flavoprotein C-terminal domain I633_14990 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I633_14990 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I633_15030 PF01965 DJ-1/PfpI family I633_15035 PF03631 Virulence factor BrkB I633_15045 PF07152 YaeQ protein I633_15080 PF07690 Major Facilitator Superfamily I633_15095 PF09382 RQC domain I633_15095 PF16124 RecQ zinc-binding I633_15095 PF00570 HRDC domain I633_15095 PF00271 Helicase conserved C-terminal domain I633_15095 PF00270 DEAD/DEAH box helicase I633_15115 PF00072 Response regulator receiver domain I633_15115 PF01627 Hpt domain I633_15115 PF00512 His Kinase A (phospho-acceptor) domain I633_15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_15115 PF00672 HAMP domain I633_15115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I633_15130 PF00360 Phytochrome region I633_15130 PF00512 His Kinase A (phospho-acceptor) domain I633_15130 PF01590 GAF domain I633_15130 PF08446 PAS fold I633_15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_15135 PF07995 Glucose / Sorbosone dehydrogenase I633_15140 PF13657 HipA N-terminal domain I633_15140 PF07804 HipA-like C-terminal domain I633_15160 PF13276 HTH-like domain I633_15160 PF13333 Integrase core domain I633_15160 PF00665 Integrase core domain I633_15180 PF00360 Phytochrome region I633_15180 PF01590 GAF domain I633_15180 PF00563 EAL domain I633_15180 PF00990 Diguanylate cyclase, GGDEF domain I633_15210 PF11426 Tn7 transposition regulator TnsC I633_15210 PF13401 AAA domain I633_15240 PF00563 EAL domain I633_15240 PF08448 PAS fold I633_15240 PF00990 Diguanylate cyclase, GGDEF domain I633_15250 PF17191 RecG wedge domain I633_15250 PF00271 Helicase conserved C-terminal domain I633_15250 PF00270 DEAD/DEAH box helicase I633_15315 PF01597 Glycine cleavage H-protein I633_15320 PF01571 Aminomethyltransferase folate-binding domain I633_15320 PF08669 Glycine cleavage T-protein C-terminal barrel domain I633_15325 PF01979 Amidohydrolase family I633_15330 PF01869 BadF/BadG/BcrA/BcrD ATPase family I633_15335 PF03466 LysR substrate binding domain I633_15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_15340 PF02652 L-lactate permease I633_15350 PF00557 Metallopeptidase family M24 I633_15350 PF01321 Creatinase/Prolidase N-terminal domain I633_15370 PF01494 FAD binding domain I633_15375 PF01494 FAD binding domain I633_15380 PF05195 Aminopeptidase P, N-terminal domain I633_15380 PF00557 Metallopeptidase family M24 I633_15385 PF03695 Uncharacterised protein family (UPF0149) I633_15390 PF00294 pfkB family carbohydrate kinase I633_15395 PF01156 Inosine-uridine preferring nucleoside hydrolase I633_15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_15400 PF00512 His Kinase A (phospho-acceptor) domain I633_15400 PF00989 PAS fold I633_15400 PF00072 Response regulator receiver domain I633_15400 PF00497 Bacterial extracellular solute-binding proteins, family 3 I633_15400 PF01627 Hpt domain I633_15405 PF01812 5-formyltetrahydrofolate cyclo-ligase family I633_15410 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) I633_15415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I633_15415 PF01842 ACT domain I633_15415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I633_15435 PF06945 Protein of unknown function (DUF1289) I633_15445 PF00873 AcrB/AcrD/AcrF family I633_15450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I633_15455 PF03466 LysR substrate binding domain I633_15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_15470 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_15470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I633_15475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) I633_15475 PF00364 Biotin-requiring enzyme I633_15475 PF02817 e3 binding domain I633_15480 PF00456 Transketolase, thiamine diphosphate binding domain I633_15480 PF17831 Pyruvate dehydrogenase E1 component middle domain I633_15485 PF00392 Bacterial regulatory proteins, gntR family I633_15485 PF07729 FCD domain I633_15495 PF01510 N-acetylmuramoyl-L-alanine amidase I633_15505 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain I633_15505 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain I633_15525 PF06750 Bacterial Peptidase A24 N-terminal domain I633_15525 PF01478 Type IV leader peptidase family I633_15530 PF01121 Dephospho-CoA kinase I633_15535 PF07072 Cell division protein I633_15555 PF00293 NUDIX domain I633_15570 PF01551 Peptidase family M23 I633_15570 PF01476 LysM domain I633_15570 PF08525 Opacity-associated protein A N-terminal motif I633_15575 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase I633_15580 PF12327 FtsZ family, C-terminal domain I633_15580 PF00091 Tubulin/FtsZ family, GTPase domain I633_15585 PF02491 SHS2 domain inserted in FTSA I633_15590 PF03799 Cell division protein FtsQ I633_15590 PF08478 POTRA domain, FtsQ-type I633_15595 PF07478 D-ala D-ala ligase C-terminus I633_15595 PF01820 D-ala D-ala ligase N-terminus I633_15600 PF08245 Mur ligase middle domain I633_15600 PF02875 Mur ligase family, glutamate ligase domain I633_15600 PF01225 Mur ligase family, catalytic domain I633_15625 PF02875 Mur ligase family, glutamate ligase domain I633_15625 PF08245 Mur ligase middle domain I633_15630 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 I633_15630 PF00953 Glycosyl transferase family 4 I633_15635 PF08245 Mur ligase middle domain I633_15635 PF02875 Mur ligase family, glutamate ligase domain I633_15635 PF01225 Mur ligase family, catalytic domain I633_15640 PF02875 Mur ligase family, glutamate ligase domain I633_15640 PF01225 Mur ligase family, catalytic domain I633_15640 PF08245 Mur ligase middle domain I633_15645 PF00905 Penicillin binding protein transpeptidase domain I633_15645 PF03717 Penicillin-binding Protein dimerisation domain I633_15650 PF04999 Cell division protein FtsL I633_15655 PF01795 MraW methylase family I633_15660 PF02381 MraZ protein, putative antitoxin-like I633_15680 PF00873 AcrB/AcrD/AcrF family I633_15685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I633_15685 PF00529 HlyD membrane-fusion protein of T1SS I633_15710 PF00462 Glutaredoxin I633_15710 PF08534 Redoxin I633_15715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain I633_15725 PF00990 Diguanylate cyclase, GGDEF domain I633_15725 PF17158 Membrane-associated sensor, integral membrane domain I633_15735 PF00158 Sigma-54 interaction domain I633_15735 PF00072 Response regulator receiver domain I633_15735 PF02954 Bacterial regulatory protein, Fis family I633_15740 PF00072 Response regulator receiver domain I633_15740 PF09456 RcsC Alpha-Beta-Loop (ABL) I633_15740 PF00512 His Kinase A (phospho-acceptor) domain I633_15740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_15745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal I633_15745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III I633_15765 PF00924 Mechanosensitive ion channel I633_15765 PF05552 Conserved TM helix I633_15770 PF04452 RNA methyltransferase I633_15775 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain I633_15775 PF02951 Prokaryotic glutathione synthetase, N-terminal domain I633_15780 PF02622 Uncharacterized ACR, COG1678 I633_15785 PF03652 Holliday junction resolvase I633_15795 PF00437 Type II/IV secretion system protein I633_15800 PF00437 Type II/IV secretion system protein I633_15805 PF01168 Alanine racemase, N-terminal domain I633_15810 PF14748 Pyrroline-5-carboxylate reductase dimerisation I633_15810 PF03807 NADP oxidoreductase coenzyme F420-dependent I633_15830 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_15830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family I633_15845 PF02798 Glutathione S-transferase, N-terminal domain I633_15845 PF14834 Glutathione S-transferase, C-terminal domain I633_15850 PF00080 Copper/zinc superoxide dismutase (SODC) I633_15855 PF01625 Peptide methionine sulfoxide reductase I633_15870 PF03591 AzlC protein I633_15880 PF07690 Major Facilitator Superfamily I633_15885 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) I633_15890 PF03883 Peroxide stress protein YaaA I633_15900 PF00923 Transaldolase/Fructose-6-phosphate aldolase I633_15905 PF00342 Phosphoglucose isomerase I633_15925 PF00291 Pyridoxal-phosphate dependent enzyme I633_15925 PF14821 Threonine synthase N terminus I633_15930 PF00288 GHMP kinases N terminal domain I633_15930 PF08544 GHMP kinases C terminal I633_15955 PF03466 LysR substrate binding domain I633_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_15960 PF08240 Alcohol dehydrogenase GroES-like domain I633_15960 PF00107 Zinc-binding dehydrogenase I633_15970 PF01022 Bacterial regulatory protein, arsR family I633_15980 PF03358 NADPH-dependent FMN reductase I633_15985 PF01758 Sodium Bile acid symporter family I633_15990 PF00072 Response regulator receiver domain I633_15990 PF01339 CheB methylesterase I633_15995 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) I633_16000 PF00072 Response regulator receiver domain I633_16000 PF00486 Transcriptional regulatory protein, C terminal I633_16005 PF00672 HAMP domain I633_16005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_16005 PF00512 His Kinase A (phospho-acceptor) domain I633_16035 PF04116 Fatty acid hydroxylase superfamily I633_16055 PF03435 Saccharopine dehydrogenase NADP binding domain I633_16055 PF16653 Saccharopine dehydrogenase C-terminal domain I633_16060 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain I633_16070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases I633_16075 PF04348 LppC putative lipoprotein I633_16080 PF02021 Uncharacterised protein family UPF0102 I633_16085 PF00534 Glycosyl transferases group 1 I633_16090 PF13580 SIS domain I633_16095 PF04972 BON domain I633_16100 PF07690 Major Facilitator Superfamily I633_16110 PF00893 Small Multidrug Resistance protein I633_16125 PF00196 Bacterial regulatory proteins, luxR family I633_16125 PF00072 Response regulator receiver domain I633_16140 PF07715 TonB-dependent Receptor Plug Domain I633_16140 PF00593 TonB dependent receptor I633_16155 PF00285 Citrate synthase, C-terminal domain I633_16160 PF00694 Aconitase C-terminal domain I633_16160 PF00330 Aconitase family (aconitate hydratase) I633_16185 PF00474 Sodium:solute symporter family I633_16210 PF01510 N-acetylmuramoyl-L-alanine amidase I633_16235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster I633_16235 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_16250 PF01048 Phosphorylase superfamily I633_16255 PF03186 CobD/Cbib protein I633_16260 PF01497 Periplasmic binding protein I633_16280 PF01266 FAD dependent oxidoreductase I633_16285 PF00579 tRNA synthetases class I (W and Y) I633_16295 PF01476 LysM domain I633_16295 PF01551 Peptidase family M23 I633_16330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family I633_16350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I633_16350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I633_16355 PF02798 Glutathione S-transferase, N-terminal domain I633_16355 PF00043 Glutathione S-transferase, C-terminal domain I633_16360 PF01521 Iron-sulphur cluster biosynthesis I633_16375 PF03976 Polyphosphate kinase 2 (PPK2) I633_16380 PF03776 Septum formation topological specificity factor MinE I633_16385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain I633_16390 PF05209 Septum formation inhibitor MinC, N-terminal domain I633_16390 PF03775 Septum formation inhibitor MinC, C-terminal domain I633_16395 PF00206 Lyase I633_16395 PF10415 Fumarase C C-terminus I633_16400 PF00127 Copper binding proteins, plastocyanin/azurin family I633_16455 PF08448 PAS fold I633_16455 PF00512 His Kinase A (phospho-acceptor) domain I633_16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_16455 PF00072 Response regulator receiver domain I633_16455 PF13188 PAS domain I633_16470 PF00120 Glutamine synthetase, catalytic domain I633_16470 PF03951 Glutamine synthetase, beta-Grasp domain I633_16480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_16480 PF00989 PAS fold I633_16480 PF00512 His Kinase A (phospho-acceptor) domain I633_16500 PF00072 Response regulator receiver domain I633_16505 PF01553 Acyltransferase I633_16510 PF06877 Regulator of ribonuclease activity B I633_16520 PF17158 Membrane-associated sensor, integral membrane domain I633_16520 PF00990 Diguanylate cyclase, GGDEF domain I633_16550 PF08264 Anticodon-binding domain of tRNA I633_16550 PF00133 tRNA synthetases class I (I, L, M and V) I633_16550 PF10458 Valyl tRNA synthetase tRNA binding arm I633_16555 PF04364 DNA polymerase III chi subunit, HolC I633_16560 PF02789 Cytosol aminopeptidase family, N-terminal domain I633_16560 PF00883 Cytosol aminopeptidase family, catalytic domain I633_16575 PF03739 Lipopolysaccharide export system permease LptF/LptG I633_16590 PF04545 Sigma-70, region 4 I633_16590 PF04542 Sigma-70 region 2 I633_16640 PF01751 Toprim domain I633_16640 PF01396 Topoisomerase DNA binding C4 zinc finger I633_16640 PF01131 DNA topoisomerase I633_16690 PF06114 IrrE N-terminal-like domain I633_16755 PF16355 Domain of unknown function (DUF4982) I633_16755 PF00703 Glycosyl hydrolases family 2 I633_16755 PF02836 Glycosyl hydrolases family 2, TIM barrel domain I633_16755 PF02837 Glycosyl hydrolases family 2, sugar binding domain I633_16755 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 I633_16785 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain I633_16785 PF04616 Glycosyl hydrolases family 43 I633_16795 PF00990 Diguanylate cyclase, GGDEF domain I633_16795 PF13185 GAF domain I633_16820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold I633_16820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain I633_16835 PF01594 AI-2E family transporter I633_16850 PF00005 ABC transporter I633_16855 PF01032 FecCD transport family I633_16890 PF00230 Major intrinsic protein I633_16895 PF00892 EamA-like transporter family I633_16930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain I633_16930 PF00753 Metallo-beta-lactamase superfamily I633_16930 PF10996 Beta-Casp domain I633_16945 PF00557 Metallopeptidase family M24 I633_16945 PF01321 Creatinase/Prolidase N-terminal domain I633_16950 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain I633_16950 PF05221 S-adenosyl-L-homocysteine hydrolase I633_16955 PF00072 Response regulator receiver domain I633_16955 PF00990 Diguanylate cyclase, GGDEF domain I633_16960 PF03547 Membrane transport protein I633_16965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III I633_16965 PF13360 PQQ-like domain I633_16995 PF00005 ABC transporter I633_17005 PF00883 Cytosol aminopeptidase family, catalytic domain I633_17005 PF02789 Cytosol aminopeptidase family, N-terminal domain I633_17010 PF12706 Beta-lactamase superfamily domain I633_17015 PF03070 TENA/THI-4/PQQC family I633_17020 PF05402 Coenzyme PQQ synthesis protein D (PqqD) I633_17025 PF13186 Iron-sulfur cluster-binding domain I633_17025 PF04055 Radical SAM superfamily I633_17050 PF00196 Bacterial regulatory proteins, luxR family I633_17050 PF00072 Response regulator receiver domain I633_17055 PF00512 His Kinase A (phospho-acceptor) domain I633_17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_17070 PF04205 FMN-binding domain I633_17070 PF12801 4Fe-4S binding domain I633_17085 PF00171 Aldehyde dehydrogenase family I633_17090 PF00072 Response regulator receiver domain I633_17090 PF00196 Bacterial regulatory proteins, luxR family I633_17105 PF03466 LysR substrate binding domain I633_17105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_17110 PF00171 Aldehyde dehydrogenase family I633_17115 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase I633_17115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase I633_17130 PF01565 FAD binding domain I633_17130 PF09330 D-lactate dehydrogenase, membrane binding I633_17145 PF03783 Curli production assembly/transport component CsgG I633_17180 PF00072 Response regulator receiver domain I633_17180 PF00196 Bacterial regulatory proteins, luxR family I633_17210 PF01081 KDPG and KHG aldolase I633_17215 PF00294 pfkB family carbohydrate kinase I633_17225 PF07729 FCD domain I633_17225 PF00392 Bacterial regulatory proteins, gntR family I633_17230 PF12794 Mechanosensitive ion channel inner membrane domain 1 I633_17230 PF00924 Mechanosensitive ion channel I633_17230 PF12795 Mechanosensitive ion channel porin domain I633_17240 PF00141 Peroxidase I633_17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_17265 PF03466 LysR substrate binding domain I633_17280 PF01925 Sulfite exporter TauE/SafE I633_17300 PF08769 Sporulation initiation factor Spo0A C terminal I633_17300 PF00072 Response regulator receiver domain I633_17330 PF03104 DNA polymerase family B, exonuclease domain I633_17330 PF00136 DNA polymerase family B I633_17340 PF13193 AMP-binding enzyme C-terminal domain I633_17340 PF00501 AMP-binding enzyme I633_17355 PF05958 tRNA (Uracil-5-)-methyltransferase I633_17360 PF00440 Bacterial regulatory proteins, tetR family I633_17370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I633_17370 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_17380 PF03167 Uracil DNA glycosylase superfamily I633_17385 PF03707 Bacterial signalling protein N terminal repeat I633_17385 PF00990 Diguanylate cyclase, GGDEF domain I633_17385 PF00563 EAL domain I633_17395 PF01507 Phosphoadenosine phosphosulfate reductase family I633_17400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain I633_17400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain I633_17405 PF00175 Oxidoreductase NAD-binding domain I633_17405 PF00667 FAD binding domain I633_17405 PF00258 Flavodoxin I633_17425 PF04024 PspC domain I633_17430 PF04012 PspA/IM30 family I633_17440 PF01207 Dihydrouridine synthase (Dus) I633_17465 PF00691 OmpA family I633_17465 PF01389 OmpA-like transmembrane domain I633_17470 PF02190 ATP-dependent protease La (LON) substrate-binding domain I633_17470 PF05362 Lon protease (S16) C-terminal proteolytic domain I633_17470 PF00004 ATPase family associated with various cellular activities (AAA) I633_17485 PF00756 Putative esterase I633_17490 PF01553 Acyltransferase I633_17495 PF01553 Acyltransferase I633_17500 PF00924 Mechanosensitive ion channel I633_17520 PF01370 NAD dependent epimerase/dehydratase family I633_17550 PF01625 Peptide methionine sulfoxide reductase I633_17565 PF00258 Flavodoxin I633_17575 PF02472 Biopolymer transport protein ExbD/TolR I633_17600 PF01270 Glycosyl hydrolases family 8 I633_17630 PF05175 Methyltransferase small domain I633_17635 PF13460 NAD(P)H-binding I633_17640 PF00326 Prolyl oligopeptidase family I633_17640 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region I633_17645 PF08000 Bacterial PH domain I633_17650 PF08448 PAS fold I633_17650 PF00990 Diguanylate cyclase, GGDEF domain I633_17650 PF00563 EAL domain I633_17665 PF07969 Amidohydrolase family I633_17675 PF00753 Metallo-beta-lactamase superfamily I633_17685 PF03466 LysR substrate binding domain I633_17685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_17690 PF13230 Glutamine amidotransferases class-II I633_17695 PF05360 yiaA/B two helix domain I633_17715 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin I633_17720 PF00593 TonB dependent receptor I633_17720 PF07715 TonB-dependent Receptor Plug Domain I633_17725 PF00171 Aldehyde dehydrogenase family I633_17730 PF01613 Flavin reductase like domain I633_17735 PF00881 Nitroreductase family I633_17740 PF00561 alpha/beta hydrolase fold I633_17745 PF01042 Endoribonuclease L-PSP I633_17760 PF00296 Luciferase-like monooxygenase I633_17785 PF09905 DNA-binding protein VF530 I633_17790 PF16123 Hydroxyacylglutathione hydrolase C-terminus I633_17790 PF00753 Metallo-beta-lactamase superfamily I633_17815 PF02424 ApbE family I633_17820 PF00970 Oxidoreductase FAD-binding domain I633_17820 PF00111 2Fe-2S iron-sulfur cluster binding domain I633_17820 PF00175 Oxidoreductase NAD-binding domain I633_17825 PF02508 Rnf-Nqr subunit, membrane protein I633_17830 PF02508 Rnf-Nqr subunit, membrane protein I633_17835 PF04205 FMN-binding domain I633_17840 PF03116 NQR2, RnfD, RnfE family I633_17845 PF11973 NQRA C-terminal domain I633_17845 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) I633_17850 PF01348 Type II intron maturase I633_17850 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) I633_17865 PF12241 Trans-2-enoyl-CoA reductase catalytic region I633_17865 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase I633_17865 PF07055 Enoyl reductase FAD binding domain I633_17870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I633_17870 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase I633_17875 PF00311 Phosphoenolpyruvate carboxylase I633_17895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain I633_17895 PF00056 lactate/malate dehydrogenase, NAD binding domain I633_17900 PF01316 Arginine repressor, DNA binding domain I633_17900 PF02863 Arginine repressor, C-terminal domain I633_17910 PF00593 TonB dependent receptor I633_17930 PF00485 Phosphoribulokinase / Uridine kinase family I633_17935 PF07670 Nucleoside recognition I633_17935 PF01773 Na+ dependent nucleoside transporter N-terminus I633_17935 PF07662 Na+ dependent nucleoside transporter C-terminus I633_17955 PF00990 Diguanylate cyclase, GGDEF domain I633_17955 PF00072 Response regulator receiver domain I633_17960 PF07733 Bacterial DNA polymerase III alpha NTPase domain I633_17960 PF00929 Exonuclease I633_17960 PF02811 PHP domain I633_17960 PF14579 Helix-hairpin-helix motif I633_17960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain I633_17965 PF00571 CBS domain I633_18005 PF18030 RimK PreATP-grasp domain I633_18005 PF08443 RimK-like ATP-grasp domain I633_18020 PF08443 RimK-like ATP-grasp domain I633_18020 PF18030 RimK PreATP-grasp domain I633_18030 PF00196 Bacterial regulatory proteins, luxR family I633_18030 PF00072 Response regulator receiver domain I633_18045 PF02690 Na+/Pi-cotransporter I633_18050 PF00248 Aldo/keto reductase family I633_18065 PF08448 PAS fold I633_18065 PF00990 Diguanylate cyclase, GGDEF domain I633_18065 PF00563 EAL domain I633_18065 PF08447 PAS fold I633_18080 PF03309 Type III pantothenate kinase I633_18085 PF03099 Biotin/lipoate A/B protein ligase family I633_18085 PF08279 HTH domain I633_18085 PF02237 Biotin protein ligase C terminal domain I633_18090 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain I633_18090 PF01565 FAD binding domain I633_18110 PF03412 Peptidase C39 family I633_18110 PF00664 ABC transporter transmembrane region I633_18110 PF00005 ABC transporter I633_18115 PF03466 LysR substrate binding domain I633_18115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_18150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain I633_18150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain I633_18150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain I633_18165 PF16363 GDP-mannose 4,6 dehydratase I633_18170 PF04321 RmlD substrate binding domain I633_18175 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase I633_18180 PF00483 Nucleotidyl transferase I633_18215 PF00534 Glycosyl transferases group 1 I633_18215 PF13579 Glycosyl transferase 4-like domain I633_18225 PF00293 NUDIX domain I633_18230 PF01370 NAD dependent epimerase/dehydratase family I633_18250 PF01527 Transposase I633_18255 PF13276 HTH-like domain I633_18255 PF00665 Integrase core domain I633_18255 PF13333 Integrase core domain I633_18260 PF16363 GDP-mannose 4,6 dehydratase I633_18275 PF13439 Glycosyltransferase Family 4 I633_18275 PF00534 Glycosyl transferases group 1 I633_18310 PF01050 Mannose-6-phosphate isomerase I633_18310 PF00483 Nucleotidyl transferase I633_18325 PF00700 Bacterial flagellin C-terminal helical region I633_18325 PF00669 Bacterial flagellin N-terminal helical region I633_18335 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system I633_18340 PF01196 Ribosomal protein L17 I633_18345 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain I633_18345 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain I633_18345 PF01000 RNA polymerase Rpb3/RpoA insert domain I633_18350 PF00163 Ribosomal protein S4/S9 N-terminal domain I633_18350 PF01479 S4 domain I633_18355 PF00411 Ribosomal protein S11 I633_18360 PF00416 Ribosomal protein S13/S18 I633_18365 PF00444 Ribosomal protein L36 I633_18385 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A I633_18390 PF00327 Ribosomal protein L30p/L7e I633_18395 PF00333 Ribosomal protein S5, N-terminal domain I633_18395 PF03719 Ribosomal protein S5, C-terminal domain I633_18400 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast I633_18405 PF00347 Ribosomal protein L6 I633_18410 PF00410 Ribosomal protein S8 I633_18415 PF00253 Ribosomal protein S14p/S29e I633_18420 PF00281 Ribosomal protein L5 I633_18420 PF00673 ribosomal L5P family C-terminus I633_18425 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 I633_18425 PF00467 KOW motif I633_18430 PF00238 Ribosomal protein L14p/L23e I633_18435 PF00512 His Kinase A (phospho-acceptor) domain I633_18435 PF09308 LuxQ, periplasmic I633_18435 PF00072 Response regulator receiver domain I633_18435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_18490 PF16655 PhoD-like phosphatase, N-terminal domain I633_18490 PF09423 PhoD-like phosphatase I633_18505 PF00593 TonB dependent receptor I633_18505 PF07715 TonB-dependent Receptor Plug Domain I633_18520 PF08238 Sel1 repeat I633_18530 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase I633_18535 PF00175 Oxidoreductase NAD-binding domain I633_18595 PF02322 Cytochrome bd terminal oxidase subunit II I633_18605 PF01037 Lrp/AsnC ligand binding domain I633_18605 PF13404 AsnC-type helix-turn-helix domain I633_18615 PF00313 'Cold-shock' DNA-binding domain I633_18635 PF01209 ubiE/COQ5 methyltransferase family I633_18650 PF01432 Peptidase family M3 I633_18655 PF00072 Response regulator receiver domain I633_18665 PF00989 PAS fold I633_18665 PF00512 His Kinase A (phospho-acceptor) domain I633_18665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_18670 PF00158 Sigma-54 interaction domain I633_18670 PF02954 Bacterial regulatory protein, Fis family I633_18670 PF00072 Response regulator receiver domain I633_18675 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_18675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I633_18680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain I633_18680 PF00384 Molybdopterin oxidoreductase I633_18680 PF01568 Molydopterin dinucleotide binding domain I633_18680 PF10518 TAT (twin-arginine translocation) pathway signal sequence I633_18685 PF00326 Prolyl oligopeptidase family I633_18685 PF07676 WD40-like Beta Propeller Repeat I633_18740 PF00664 ABC transporter transmembrane region I633_18740 PF03412 Peptidase C39 family I633_18740 PF00005 ABC transporter I633_18745 PF00196 Bacterial regulatory proteins, luxR family I633_18745 PF00072 Response regulator receiver domain I633_18770 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system I633_18775 PF07724 AAA domain (Cdc48 subfamily) I633_18775 PF00004 ATPase family associated with various cellular activities (AAA) I633_18780 PF00227 Proteasome subunit I633_18785 PF05036 Sporulation related domain I633_18790 PF18074 Primosomal protein N C-terminal domain I633_18790 PF18319 PriA DNA helicase Cys-rich region (CRR) domain I633_18790 PF17764 3′ DNA-binding domain (3′BD) I633_18790 PF00270 DEAD/DEAH box helicase I633_18790 PF00271 Helicase conserved C-terminal domain I633_18795 PF01197 Ribosomal protein L31 I633_18805 PF03949 Malic enzyme, NAD binding domain I633_18805 PF00390 Malic enzyme, N-terminal domain I633_18810 PF01340 Met Apo-repressor, MetJ I633_18815 PF02219 Methylenetetrahydrofolate reductase I633_18820 PF03631 Virulence factor BrkB I633_18835 PF00561 alpha/beta hydrolase fold I633_18840 PF02580 D-Tyr-tRNA(Tyr) deacylase I633_18845 PF09500 Putative thioesterase (yiiD_Cterm) I633_18845 PF00583 Acetyltransferase (GNAT) family I633_18850 PF00140 Sigma-70 factor, region 1.2 I633_18850 PF04542 Sigma-70 region 2 I633_18850 PF04545 Sigma-70, region 4 I633_18855 PF00563 EAL domain I633_18855 PF08668 HDOD domain I633_18860 PF08668 HDOD domain I633_18860 PF00563 EAL domain I633_18865 PF18075 FtsX extracellular domain I633_18880 PF02881 SRP54-type protein, helical bundle domain I633_18880 PF00448 SRP54-type protein, GTPase domain I633_18895 PF01914 MarC family integral membrane protein I633_18920 PF03749 Sugar fermentation stimulation protein RE domain I633_18920 PF17746 SfsA N-terminal OB domain I633_18925 PF01258 Prokaryotic dksA/traR C4-type zinc finger I633_18930 PF00749 tRNA synthetases class I (E and Q), catalytic domain I633_18935 PF01743 Poly A polymerase head domain I633_18935 PF12626 Polymerase A arginine-rich C-terminus I633_18935 PF12627 Probable RNA and SrmB- binding site of polymerase A I633_18940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) I633_18945 PF02548 Ketopantoate hydroxymethyltransferase I633_18950 PF02569 Pantoate-beta-alanine ligase I633_18955 PF00282 Pyridoxal-dependent decarboxylase conserved domain I633_18970 PF01061 ABC-2 type transporter I633_18985 PF00486 Transcriptional regulatory protein, C terminal I633_18985 PF00072 Response regulator receiver domain I633_19000 PF07715 TonB-dependent Receptor Plug Domain I633_19000 PF00593 TonB dependent receptor I633_19045 PF13722 5TM C-terminal transporter carbon starvation CstA I633_19045 PF02554 Carbon starvation protein CstA I633_19065 PF03143 Elongation factor Tu C-terminal domain I633_19065 PF03144 Elongation factor Tu domain 2 I633_19065 PF00009 Elongation factor Tu GTP binding domain I633_19070 PF00679 Elongation factor G C-terminus I633_19070 PF03144 Elongation factor Tu domain 2 I633_19070 PF00009 Elongation factor Tu GTP binding domain I633_19070 PF03764 Elongation factor G, domain IV I633_19070 PF14492 Elongation Factor G, domain II I633_19075 PF00177 Ribosomal protein S7p/S5e I633_19080 PF00164 Ribosomal protein S12/S23 I633_19085 PF04998 RNA polymerase Rpb1, domain 5 I633_19085 PF00623 RNA polymerase Rpb1, domain 2 I633_19085 PF04997 RNA polymerase Rpb1, domain 1 I633_19085 PF05000 RNA polymerase Rpb1, domain 4 I633_19085 PF04983 RNA polymerase Rpb1, domain 3 I633_19105 PF00466 Ribosomal protein L10 I633_19110 PF00687 Ribosomal protein L1p/L10e family I633_19115 PF00298 Ribosomal protein L11, RNA binding domain I633_19115 PF03946 Ribosomal protein L11, N-terminal domain I633_19135 PF02357 Transcription termination factor nusG I633_19135 PF00467 KOW motif I633_19140 PF00584 SecE/Sec61-gamma subunits of protein translocation complex I633_19155 PF03737 Aldolase/RraA I633_19175 PF00271 Helicase conserved C-terminal domain I633_19175 PF00270 DEAD/DEAH box helicase I633_19175 PF03880 DbpA RNA binding domain I633_19180 PF01979 Amidohydrolase family I633_19185 PF08212 Lipocalin-like domain I633_19190 PF00248 Aldo/keto reductase family I633_19195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I633_19200 PF00924 Mechanosensitive ion channel I633_19200 PF05552 Conserved TM helix I633_19205 PF07690 Major Facilitator Superfamily I633_19220 PF01227 GTP cyclohydrolase I I633_19240 PF00795 Carbon-nitrogen hydrolase I633_19265 PF04679 ATP dependent DNA ligase C terminal region I633_19265 PF01068 ATP dependent DNA ligase domain I633_19265 PF04675 DNA ligase N terminus I633_19270 PF08207 Elongation factor P (EF-P) KOW-like domain I633_19270 PF01132 Elongation factor P (EF-P) OB domain I633_19270 PF09285 Elongation factor P, C-terminal I633_19275 PF00294 pfkB family carbohydrate kinase I633_19285 PF02310 B12 binding domain I633_19285 PF02607 B12 binding domain I633_19285 PF00809 Pterin binding enzyme I633_19285 PF02574 Homocysteine S-methyltransferase I633_19285 PF02965 Vitamin B12 dependent methionine synthase, activation domain I633_19290 PF02798 Glutathione S-transferase, N-terminal domain I633_19290 PF00043 Glutathione S-transferase, C-terminal domain I633_19310 PF00561 alpha/beta hydrolase fold I633_19325 PF00171 Aldehyde dehydrogenase family I633_19330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain I633_19330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain I633_19330 PF00205 Thiamine pyrophosphate enzyme, central domain I633_19340 PF00762 Ferrochelatase I633_19355 PF01145 SPFH domain / Band 7 family I633_19360 PF01145 SPFH domain / Band 7 family I633_19360 PF12221 Bacterial membrane protein N terminal I633_19365 PF13167 GTP-binding GTPase N-terminal I633_19365 PF01926 50S ribosome-binding GTPase I633_19365 PF16360 GTP-binding GTPase Middle Region I633_19370 PF17209 Hfq protein I633_19380 PF01119 DNA mismatch repair protein, C-terminal domain I633_19380 PF08676 MutL C terminal dimerisation domain I633_19385 PF01520 N-acetylmuramoyl-L-alanine amidase I633_19390 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE I633_19405 PF08331 Domain of unknown function (DUF1730) I633_19425 PF00293 NUDIX domain I633_19425 PF09297 NADH pyrophosphatase zinc ribbon domain I633_19430 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ I633_19435 PF01475 Ferric uptake regulator family I633_19445 PF01894 Uncharacterised protein family UPF0047 I633_19450 PF05736 OprF membrane domain I633_19450 PF00691 OmpA family I633_19455 PF03796 DnaB-like helicase C terminal domain I633_19455 PF00772 DnaB-like helicase N terminal domain I633_19480 PF03475 3-alpha domain I633_19480 PF03473 MOSC domain I633_19495 PF01281 Ribosomal protein L9, N-terminal domain I633_19495 PF03948 Ribosomal protein L9, C-terminal domain I633_19500 PF01084 Ribosomal protein S18 I633_19505 PF01250 Ribosomal protein S6 I633_19510 PF00512 His Kinase A (phospho-acceptor) domain I633_19510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_19510 PF00672 HAMP domain I633_19510 PF00072 Response regulator receiver domain I633_19510 PF01627 Hpt domain I633_19520 PF12704 MacB-like periplasmic core domain I633_19520 PF00005 ABC transporter I633_19520 PF02687 FtsX-like permease family I633_19530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_19530 PF08447 PAS fold I633_19535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_19535 PF00512 His Kinase A (phospho-acceptor) domain I633_19535 PF13426 PAS domain I633_19535 PF13188 PAS domain I633_19535 PF00989 PAS fold I633_19540 PF02743 Cache domain I633_19540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I633_19540 PF00672 HAMP domain I633_19600 PF07690 Major Facilitator Superfamily I633_19605 PF00232 Glycosyl hydrolase family 1 I633_19610 PF00356 Bacterial regulatory proteins, lacI family I633_19615 PF00083 Sugar (and other) transporter I633_19620 PF00005 ABC transporter I633_19620 PF00664 ABC transporter transmembrane region I633_19635 PF08173 Membrane bound YbgT-like protein I633_19640 PF02322 Cytochrome bd terminal oxidase subunit II I633_19645 PF01654 Cytochrome bd terminal oxidase subunit I I633_19655 PF00158 Sigma-54 interaction domain I633_19655 PF00072 Response regulator receiver domain I633_19685 PF13474 SnoaL-like domain I633_19700 PF00990 Diguanylate cyclase, GGDEF domain I633_19700 PF17151 Periplasmic sensor domain I633_19710 PF04954 Siderophore-interacting protein I633_19710 PF08021 Siderophore-interacting FAD-binding domain I633_19715 PF05532 CsbD-like I633_19735 PF00472 RF-1 domain I633_19740 PF00364 Biotin-requiring enzyme I633_19740 PF00561 alpha/beta hydrolase fold I633_19760 PF01292 Prokaryotic cytochrome b561 I633_19765 PF04264 YceI-like domain I633_19770 PF07992 Pyridine nucleotide-disulphide oxidoreductase I633_19790 PF03466 LysR substrate binding domain I633_19790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_19795 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) I633_19800 PF16884 N-terminal domain of oxidoreductase I633_19800 PF00107 Zinc-binding dehydrogenase I633_19805 PF01590 GAF domain I633_19805 PF00990 Diguanylate cyclase, GGDEF domain I633_19805 PF00563 EAL domain I633_19805 PF00360 Phytochrome region I633_19810 PF00512 His Kinase A (phospho-acceptor) domain I633_19810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_19810 PF00072 Response regulator receiver domain I633_19810 PF09308 LuxQ, periplasmic I633_19830 PF13007 Transposase C of IS166 homeodomain I633_19830 PF13817 IS66 C-terminal element I633_19830 PF03050 Transposase IS66 family I633_19830 PF13005 zinc-finger binding domain of transposase IS66 I633_19835 PF00296 Luciferase-like monooxygenase I633_19855 PF02665 Nitrate reductase gamma subunit I633_19860 PF02613 Nitrate reductase delta subunit I633_19865 PF14711 Respiratory nitrate reductase beta C-terminal I633_19865 PF13247 4Fe-4S dicluster domain I633_19870 PF14710 Respiratory nitrate reductase alpha N-terminal I633_19870 PF01568 Molydopterin dinucleotide binding domain I633_19870 PF00384 Molybdopterin oxidoreductase I633_19880 PF00672 HAMP domain I633_19880 PF07730 Histidine kinase I633_19880 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term I633_19880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I633_19890 PF03459 TOBE domain I633_19890 PF00005 ABC transporter I633_19895 PF00528 Binding-protein-dependent transport system inner membrane component I633_19900 PF07690 Major Facilitator Superfamily I633_19905 PF00072 Response regulator receiver domain I633_19905 PF00196 Bacterial regulatory proteins, luxR family I633_19910 PF03454 MoeA C-terminal region (domain IV) I633_19910 PF00994 Probable molybdopterin binding domain I633_19910 PF03453 MoeA N-terminal region (domain I and II) I633_19915 PF04304 Protein of unknown function (DUF454) I633_19925 PF02391 MoaE protein I633_19930 PF02597 ThiS family I633_19935 PF01967 MoaC family I633_19940 PF00994 Probable molybdopterin binding domain I633_19945 PF12804 MobA-like NTP transferase domain I633_19950 PF06463 Molybdenum Cofactor Synthesis C I633_19950 PF04055 Radical SAM superfamily I633_19960 PF00899 ThiF family I633_19975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain I633_19975 PF00205 Thiamine pyrophosphate enzyme, central domain I633_19975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain I633_20000 PF04405 Domain of Unknown function (DUF542) I633_20000 PF01814 Hemerythrin HHE cation binding domain I633_20030 PF07690 Major Facilitator Superfamily I633_20035 PF07690 Major Facilitator Superfamily I633_20040 PF00069 Protein kinase domain I633_20050 PF00005 ABC transporter I633_20080 PF08220 DeoR-like helix-turn-helix domain I633_20080 PF00455 DeoR C terminal sensor domain I633_20085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain I633_20085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold I633_20090 PF00132 Bacterial transferase hexapeptide (six repeats) I633_20090 PF14602 Hexapeptide repeat of succinyl-transferase I633_20090 PF12804 MobA-like NTP transferase domain I633_20100 PF00892 EamA-like transporter family I633_20105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain I633_20105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain I633_20110 PF00730 HhH-GPD superfamily base excision DNA repair protein I633_20110 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain I633_20115 PF00144 Beta-lactamase I633_20120 PF17810 Arginine decarboxylase helical bundle domain I633_20120 PF17944 Arginine decarboxylase C-terminal helical extension I633_20120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain I633_20130 PF02233 NAD(P) transhydrogenase beta subunit I633_20135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch I633_20210 PF01040 UbiA prenyltransferase family I633_20215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV I633_20220 PF00510 Cytochrome c oxidase subunit III I633_20225 PF00115 Cytochrome C and Quinol oxidase polypeptide I I633_20230 PF00116 Cytochrome C oxidase subunit II, periplasmic domain I633_20230 PF06481 COX Aromatic Rich Motif I633_20280 PF00166 Chaperonin 10 Kd subunit I633_20305 PF02683 Cytochrome C biogenesis protein transmembrane region I633_20305 PF11412 Disulphide bond corrector protein DsbC I633_20310 PF01551 Peptidase family M23 I633_20315 PF01220 Dehydroquinase class II I633_20360 PF07733 Bacterial DNA polymerase III alpha NTPase domain I633_20360 PF11490 DNA polymerase III polC-type N-terminus II I633_20360 PF14579 Helix-hairpin-helix motif I633_20360 PF02811 PHP domain I633_20360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain I633_20360 PF00929 Exonuclease I633_20380 PF01355 High potential iron-sulfur protein I633_20405 PF01207 Dihydrouridine synthase (Dus) I633_20410 PF02954 Bacterial regulatory protein, Fis family I633_20440 PF02843 Phosphoribosylglycinamide synthetase, C domain I633_20440 PF02844 Phosphoribosylglycinamide synthetase, N domain I633_20440 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain I633_20465 PF00027 Cyclic nucleotide-binding domain I633_20465 PF00520 Ion transport protein I633_20470 PF00485 Phosphoribulokinase / Uridine kinase family I633_20510 PF17137 Domain of unknown function (DUF5110) I633_20510 PF01055 Glycosyl hydrolases family 31 I633_20510 PF16338 Domain of unknown function (DUF4968) I633_20510 PF13802 Galactose mutarotase-like I633_20535 PF01479 S4 domain I633_20540 PF11356 Type II secretion system protein C I633_20545 PF00263 Bacterial type II and III secretion system protein I633_20545 PF03958 Bacterial type II/III secretion system short domain I633_20550 PF00437 Type II/IV secretion system protein I633_20555 PF00482 Type II secretion system (T2SS), protein F I633_20560 PF08334 Type II secretion system (T2SS), protein G I633_20560 PF07963 Prokaryotic N-terminal methylation motif I633_20565 PF12019 Type II transport protein GspH I633_20570 PF07963 Prokaryotic N-terminal methylation motif I633_20570 PF02501 Type II secretion system (T2SS), protein I I633_20575 PF07963 Prokaryotic N-terminal methylation motif I633_20575 PF11612 Type II secretion system (T2SS), protein J I633_20585 PF05134 Type II secretion system (T2SS), protein L I633_20585 PF12693 GspL periplasmic domain I633_20590 PF04612 Type II secretion system (T2SS), protein M I633_20605 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) I633_20615 PF01734 Patatin-like phospholipase I633_20620 PF00171 Aldehyde dehydrogenase family I633_20625 PF01931 Protein of unknown function DUF84 I633_20630 PF13419 Haloacid dehalogenase-like hydrolase I633_20635 PF00293 NUDIX domain I633_20640 PF00459 Inositol monophosphatase family I633_20655 PF04349 Periplasmic glucan biosynthesis protein, MdoG I633_20665 PF06794 Uncharacterised protein family (UPF0270) I633_20670 PF00561 alpha/beta hydrolase fold I633_20705 PF04102 SlyX I633_20715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase I633_20715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I633_20725 PF01272 Transcription elongation factor, GreA/GreB, C-term I633_20725 PF03449 Transcription elongation factor, N-terminal I633_20730 PF09371 Tex-like protein N-terminal domain I633_20730 PF17674 HHH domain I633_20730 PF00575 S1 RNA binding domain I633_20730 PF16921 Tex protein YqgF-like domain I633_20735 PF04820 Tryptophan halogenase I633_20755 PF12833 Helix-turn-helix domain I633_20765 PF04616 Glycosyl hydrolases family 43 I633_20775 PF00331 Glycosyl hydrolase family 10 I633_20775 PF00553 Cellulose binding domain I633_20775 PF03422 Carbohydrate binding module (family 6) I633_20780 PF00248 Aldo/keto reductase family I633_20785 PF00456 Transketolase, thiamine diphosphate binding domain I633_20785 PF02780 Transketolase, C-terminal domain I633_20785 PF02779 Transketolase, pyrimidine binding domain I633_20795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain I633_20795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain I633_20800 PF00923 Transaldolase/Fructose-6-phosphate aldolase I633_20820 PF00083 Sugar (and other) transporter I633_20835 PF00457 Glycosyl hydrolases family 11 I633_20840 PF06964 Alpha-L-arabinofuranosidase C-terminal domain I633_20865 PF00561 alpha/beta hydrolase fold I633_20870 PF00156 Phosphoribosyl transferase domain I633_20885 PF01521 Iron-sulphur cluster biosynthesis I633_20885 PF01106 NifU-like domain I633_20895 PF01177 Asp/Glu/Hydantoin racemase I633_20915 PF01522 Polysaccharide deacetylase I633_20915 PF14883 Hypothetical glycosyl hydrolase family 13 I633_20925 PF02630 SCO1/SenC I633_20930 PF01040 UbiA prenyltransferase family I633_20935 PF02628 Cytochrome oxidase assembly protein I633_20975 PF00115 Cytochrome C and Quinol oxidase polypeptide I I633_20980 PF00116 Cytochrome C oxidase subunit II, periplasmic domain I633_20980 PF02790 Cytochrome C oxidase subunit II, transmembrane domain I633_20985 PF01726 LexA DNA binding domain I633_20985 PF00717 Peptidase S24-like I633_20990 PF01553 Acyltransferase I633_20995 PF00291 Pyridoxal-phosphate dependent enzyme I633_20995 PF00585 C-terminal regulatory domain of Threonine dehydratase I633_21000 PF00920 Dehydratase family I633_21005 PF03458 UPF0126 domain I633_21010 PF13335 Magnesium chelatase, subunit ChlI C-terminal I633_21010 PF01078 Magnesium chelatase, subunit ChlI I633_21015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_21015 PF03466 LysR substrate binding domain I633_21020 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain I633_21020 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain I633_21080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I633_21080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I633_21090 PF01472 PUA domain I633_21090 PF00696 Amino acid kinase family I633_21115 PF03109 ABC1 family I633_21165 PF01206 Sulfurtransferase TusA I633_21170 PF00156 Phosphoribosyl transferase domain I633_21175 PF03725 3' exoribonuclease family, domain 2 I633_21175 PF01138 3' exoribonuclease family, domain 1 I633_21185 PF08340 Domain of unknown function (DUF1732) I633_21185 PF03755 YicC-like family, N-terminal region I633_21255 PF02384 N-6 DNA Methylase I633_21255 PF12161 HsdM N-terminal domain I633_21345 PF04820 Tryptophan halogenase I633_21360 PF00232 Glycosyl hydrolase family 1 I633_21370 PF00356 Bacterial regulatory proteins, lacI family I633_21380 PF05736 OprF membrane domain I633_21380 PF00691 OmpA family I633_21385 PF01966 HD domain I633_21405 PF02798 Glutathione S-transferase, N-terminal domain I633_21405 PF00043 Glutathione S-transferase, C-terminal domain I633_21415 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain I633_21415 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain I633_21420 PF02874 ATP synthase alpha/beta family, beta-barrel domain I633_21420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I633_21435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I633_21435 PF00306 ATP synthase alpha/beta chain, C terminal domain I633_21435 PF02874 ATP synthase alpha/beta family, beta-barrel domain I633_21440 PF00213 ATP synthase delta (OSCP) subunit I633_21445 PF00430 ATP synthase B/B' CF(0) I633_21450 PF00137 ATP synthase subunit C I633_21455 PF00119 ATP synthase A chain I633_21465 PF02195 ParB-like nuclease domain I633_21465 PF17762 HTH domain found in ParB protein I633_21470 PF13614 AAA domain I633_21475 PF02527 rRNA small subunit methyltransferase G I633_21480 PF01134 Glucose inhibited division protein A I633_21480 PF13932 GidA associated domain I633_21495 PF00258 Flavodoxin I633_21510 PF04461 Protein of unknown function (DUF520) I633_21515 PF02096 60Kd inner membrane protein I633_21515 PF14849 YidC periplasmic domain I633_21520 PF01809 Putative membrane protein insertion efficiency factor I633_21525 PF00825 Ribonuclease P I633_21530 PF00468 Ribosomal protein L34 I633_21701 PF07690 Major Facilitator Superfamily I633_21716 PF00106 short chain dehydrogenase I633_21731 PF00866 Ring hydroxylating beta subunit I633_21761 PF02426 Muconolactone delta-isomerase I633_21776 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I633_21776 PF03466 LysR substrate binding domain I633_21821 PF12697 Alpha/beta hydrolase family I633_21826 PF01609 Transposase DDE domain I633_21826 PF05598 Transposase domain (DUF772) I633_21956 PF13614 AAA domain I633_22021 PF13936 Helix-turn-helix domain I633_22021 PF00665 Integrase core domain I633_22041 PF10411 Disulfide bond isomerase protein N-terminus I633_22041 PF13098 Thioredoxin-like domain I633_22101 PF04307 LexA-binding, inner membrane-associated putative hydrolase I633_22116 PF00436 Single-strand binding protein family I633_22136 PF00270 DEAD/DEAH box helicase I633_22136 PF17191 RecG wedge domain I633_22136 PF00271 Helicase conserved C-terminal domain I633_22206 PF06834 TraU protein I633_22216 PF06986 Type-1V conjugative transfer system mating pair stabilisation I633_22226 PF00580 UvrD/REP helicase N-terminal domain I633_22226 PF13361 UvrD-like helicase C-terminal domain I633_22276 PF00111 2Fe-2S iron-sulfur cluster binding domain I633_22351 PF02899 Phage integrase, N-terminal SAM-like domain I633_22351 PF00589 Phage integrase family I633_22356 PF10544 T5orf172 domain I633_22396 PF01526 Tn3 transposase DDE domain I633_22396 PF13700 Domain of unknown function (DUF4158) I633_22401 PF00239 Resolvase, N terminal domain I633_22401 PF02796 Helix-turn-helix domain of resolvase I633_22431 PF01339 CheB methylesterase I633_22431 PF00072 Response regulator receiver domain I633_22446 PF05656 Protein of unknown function (DUF805) I633_22491 PF00563 EAL domain I633_22491 PF12792 CSS motif domain associated with EAL I633_22626 PF00436 Single-strand binding protein family I633_22831 PF02599 Global regulator protein family I633_22886 PF12399 Branched-chain amino acid ATP-binding cassette transporter I633_22886 PF00005 ABC transporter I633_22941 PF03594 Benzoate membrane transport protein I633_22946 PF00106 short chain dehydrogenase