locus-tag class description BM524_00005 PF00308 Bacterial dnaA protein BM524_00005 PF08299 Bacterial dnaA protein helix-turn-helix BM524_00005 PF11638 DnaA N-terminal domain BM524_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BM524_00010 PF02767 DNA polymerase III beta subunit, central domain BM524_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BM524_00015 PF02463 RecF/RecN/SMC N terminal domain BM524_00020 PF01751 Toprim domain BM524_00020 PF18053 DNA gyrase B subunit insert domain BM524_00020 PF00986 DNA gyrase B subunit, carboxyl terminus BM524_00020 PF00204 DNA gyrase B BM524_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_00040 PF02092 Glycyl-tRNA synthetase beta subunit BM524_00040 PF05746 DALR anticodon binding domain BM524_00045 PF02091 Glycyl-tRNA synthetase alpha subunit BM524_00050 PF03352 Methyladenine glycosylase BM524_00060 PF04220 Der GTPase activator (YihI) BM524_00070 PF00034 Cytochrome c BM524_00075 PF01926 50S ribosome-binding GTPase BM524_00080 PF01367 5'-3' exonuclease, C-terminal SAM fold BM524_00080 PF01612 3'-5' exonuclease BM524_00080 PF00476 DNA polymerase family A BM524_00080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BM524_00090 PF02386 Cation transport protein BM524_00095 PF02080 TrkA-C domain BM524_00095 PF02254 TrkA-N domain BM524_00100 PF01029 NusB family BM524_00100 PF01189 16S rRNA methyltransferase RsmB/F BM524_00105 PF00551 Formyl transferase BM524_00105 PF02911 Formyl transferase, C-terminal domain BM524_00110 PF01327 Polypeptide deformylase BM524_00120 PF17782 DprA winged helix domain BM524_00120 PF02481 DNA recombination-mediator protein A BM524_00125 PF04361 Protein of unknown function (DUF494) BM524_00135 PF01300 Telomere recombination BM524_00140 PF01218 Coproporphyrinogen III oxidase BM524_00145 PF03922 OmpW family BM524_00155 PF01488 Shikimate / quinate 5-dehydrogenase BM524_00155 PF08501 Shikimate dehydrogenase substrate binding domain BM524_00155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BM524_00160 PF00132 Bacterial transferase hexapeptide (six repeats) BM524_00200 PF14579 Helix-hairpin-helix motif BM524_00200 PF02811 PHP domain BM524_00200 PF01336 OB-fold nucleic acid binding domain BM524_00200 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM524_00200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM524_00230 PF02225 PA domain BM524_00230 PF04389 Peptidase family M28 BM524_00235 PF05159 Capsule polysaccharide biosynthesis protein BM524_00240 PF00440 Bacterial regulatory proteins, tetR family BM524_00245 PF04127 DNA / pantothenate metabolism flavoprotein BM524_00245 PF02441 Flavoprotein BM524_00250 PF04002 RadC-like JAB domain BM524_00270 PF06082 Exopolysaccharide biosynthesis protein YbjH BM524_00275 PF00830 Ribosomal L28 family BM524_00280 PF00471 Ribosomal protein L33 BM524_00290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BM524_00290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BM524_00290 PF06827 Zinc finger found in FPG and IleRS BM524_00295 PF01467 Cytidylyltransferase-like BM524_00305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BM524_00320 PF00563 EAL domain BM524_00320 PF03707 Bacterial signalling protein N terminal repeat BM524_00320 PF00990 Diguanylate cyclase, GGDEF domain BM524_00325 PF00155 Aminotransferase class I and II BM524_00330 PF00107 Zinc-binding dehydrogenase BM524_00330 PF08240 Alcohol dehydrogenase GroES-like domain BM524_00335 PF00581 Rhodanese-like domain BM524_00340 PF01694 Rhomboid family BM524_00340 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BM524_00350 PF04345 Chorismate lyase BM524_00355 PF01040 UbiA prenyltransferase family BM524_00370 PF04380 Membrane fusogenic activity BM524_00375 PF13361 UvrD-like helicase C-terminal domain BM524_00375 PF00580 UvrD/REP helicase N-terminal domain BM524_00380 PF00563 EAL domain BM524_00380 PF00990 Diguanylate cyclase, GGDEF domain BM524_00380 PF03707 Bacterial signalling protein N terminal repeat BM524_00385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BM524_00395 PF00593 TonB dependent receptor BM524_00395 PF07715 TonB-dependent Receptor Plug Domain BM524_00400 PF03466 LysR substrate binding domain BM524_00400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_00405 PF07690 Major Facilitator Superfamily BM524_00410 PF01494 FAD binding domain BM524_00420 PF00248 Aldo/keto reductase family BM524_00425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM524_00430 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BM524_00435 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit BM524_00440 PF04909 Amidohydrolase BM524_00445 PF04909 Amidohydrolase BM524_00450 PF04303 PrpF protein BM524_00455 PF03737 Aldolase/RraA BM524_00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_00460 PF03466 LysR substrate binding domain BM524_00485 PF04143 Sulphur transport BM524_00490 PF02082 Transcriptional regulator BM524_00495 PF01925 Sulfite exporter TauE/SafE BM524_00500 PF00753 Metallo-beta-lactamase superfamily BM524_00510 PF07715 TonB-dependent Receptor Plug Domain BM524_00510 PF00593 TonB dependent receptor BM524_00525 PF00664 ABC transporter transmembrane region BM524_00525 PF00005 ABC transporter BM524_00530 PF00664 ABC transporter transmembrane region BM524_00530 PF00005 ABC transporter BM524_00540 PF01654 Cytochrome bd terminal oxidase subunit I BM524_00545 PF00581 Rhodanese-like domain BM524_00545 PF01206 Sulfurtransferase TusA BM524_00550 PF00753 Metallo-beta-lactamase superfamily BM524_00555 PF10417 C-terminal domain of 1-Cys peroxiredoxin BM524_00555 PF00578 AhpC/TSA family BM524_00560 PF02028 BCCT, betaine/carnitine/choline family transporter BM524_00580 PF13391 HNH endonuclease BM524_00590 PF13533 Biotin-lipoyl like BM524_00595 PF00005 ABC transporter BM524_00605 PF00593 TonB dependent receptor BM524_00605 PF07715 TonB-dependent Receptor Plug Domain BM524_00610 PF07715 TonB-dependent Receptor Plug Domain BM524_00610 PF00593 TonB dependent receptor BM524_00625 PF03466 LysR substrate binding domain BM524_00625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_00630 PF00753 Metallo-beta-lactamase superfamily BM524_00635 PF04317 YcjX-like family, DUF463 BM524_00650 PF06968 Biotin and Thiamin Synthesis associated domain BM524_00650 PF04055 Radical SAM superfamily BM524_00655 PF05690 Thiazole biosynthesis protein ThiG BM524_00665 PF00899 ThiF family BM524_00670 PF02581 Thiamine monophosphate synthase BM524_00675 PF13667 ThiC-associated domain BM524_00675 PF01964 Radical SAM ThiC family BM524_00680 PF07219 HemY protein N-terminus BM524_00680 PF07719 Tetratricopeptide repeat BM524_00685 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BM524_00690 PF02602 Uroporphyrinogen-III synthase HemD BM524_00695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BM524_00695 PF03900 Porphobilinogen deaminase, C-terminal domain BM524_00700 PF07694 5TMR of 5TMR-LYT BM524_00700 PF00990 Diguanylate cyclase, GGDEF domain BM524_00710 PF00625 Guanylate kinase BM524_00715 PF01192 RNA polymerase Rpb6 BM524_00720 PF02824 TGS domain BM524_00720 PF13291 ACT domain BM524_00720 PF04607 Region found in RelA / SpoT proteins BM524_00725 PF01042 Endoribonuclease L-PSP BM524_00730 PF12105 SpoU, rRNA methylase, C-terminal BM524_00730 PF00588 SpoU rRNA Methylase family BM524_00735 PF00271 Helicase conserved C-terminal domain BM524_00735 PF17191 RecG wedge domain BM524_00735 PF00270 DEAD/DEAH box helicase BM524_00740 PF04445 Putative SAM-dependent methyltransferase BM524_00745 PF08534 Redoxin BM524_00760 PF00528 Binding-protein-dependent transport system inner membrane component BM524_00765 PF00005 ABC transporter BM524_00765 PF08402 TOBE domain BM524_00770 PF05552 Conserved TM helix BM524_00770 PF00924 Mechanosensitive ion channel BM524_00785 PF00563 EAL domain BM524_00785 PF04940 Sensors of blue-light using FAD BM524_00790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_00790 PF03466 LysR substrate binding domain BM524_00795 PF01810 LysE type translocator BM524_00800 PF00893 Small Multidrug Resistance protein BM524_00815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM524_00815 PF00529 HlyD membrane-fusion protein of T1SS BM524_00820 PF00873 AcrB/AcrD/AcrF family BM524_00830 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BM524_00830 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BM524_00835 PF00850 Histone deacetylase domain BM524_00850 PF02743 Cache domain BM524_00850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_00850 PF00672 HAMP domain BM524_00860 PF11737 Protein of unknown function (DUF3300) BM524_00865 PF00925 GTP cyclohydrolase II BM524_00870 PF00563 EAL domain BM524_00870 PF08448 PAS fold BM524_00870 PF00990 Diguanylate cyclase, GGDEF domain BM524_00885 PF16124 RecQ zinc-binding BM524_00885 PF00270 DEAD/DEAH box helicase BM524_00885 PF00570 HRDC domain BM524_00885 PF09382 RQC domain BM524_00885 PF00271 Helicase conserved C-terminal domain BM524_00890 PF03448 MgtE intracellular N domain BM524_00890 PF00571 CBS domain BM524_00890 PF01769 Divalent cation transporter BM524_00895 PF00892 EamA-like transporter family BM524_00900 PF00072 Response regulator receiver domain BM524_00900 PF00990 Diguanylate cyclase, GGDEF domain BM524_00905 PF13361 UvrD-like helicase C-terminal domain BM524_00905 PF00580 UvrD/REP helicase N-terminal domain BM524_00910 PF00132 Bacterial transferase hexapeptide (six repeats) BM524_00910 PF06426 Serine acetyltransferase, N-terminal BM524_00915 PF13419 Haloacid dehalogenase-like hydrolase BM524_00930 PF01678 Diaminopimelate epimerase BM524_00935 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BM524_00935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BM524_00950 PF01569 PAP2 superfamily BM524_00955 PF03737 Aldolase/RraA BM524_00965 PF02441 Flavoprotein BM524_00970 PF08245 Mur ligase middle domain BM524_00970 PF01225 Mur ligase family, catalytic domain BM524_00970 PF02875 Mur ligase family, glutamate ligase domain BM524_00975 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BM524_00980 PF00719 Inorganic pyrophosphatase BM524_01020 PF17760 UvrA interaction domain BM524_01020 PF17755 UvrA DNA-binding domain BM524_01020 PF00005 ABC transporter BM524_01025 PF07690 Major Facilitator Superfamily BM524_01030 PF13419 Haloacid dehalogenase-like hydrolase BM524_01045 PF00356 Bacterial regulatory proteins, lacI family BM524_01055 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BM524_01055 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BM524_01060 PF00288 GHMP kinases N terminal domain BM524_01060 PF10509 Galactokinase galactose-binding signature BM524_01060 PF08544 GHMP kinases C terminal BM524_01070 PF00474 Sodium:solute symporter family BM524_01075 PF00436 Single-strand binding protein family BM524_01090 PF16874 Glycosyl hydrolase family 36 C-terminal domain BM524_01090 PF16875 Glycosyl hydrolase family 36 N-terminal domain BM524_01100 PF00474 Sodium:solute symporter family BM524_01120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BM524_01120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BM524_01125 PF00455 DeoR C terminal sensor domain BM524_01125 PF08220 DeoR-like helix-turn-helix domain BM524_01130 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BM524_01130 PF01266 FAD dependent oxidoreductase BM524_01165 PF03958 Bacterial type II/III secretion system short domain BM524_01165 PF00263 Bacterial type II and III secretion system protein BM524_01170 PF13401 AAA domain BM524_01170 PF01471 Putative peptidoglycan binding domain BM524_01180 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BM524_01180 PF00437 Type II/IV secretion system protein BM524_01185 PF00482 Type II secretion system (T2SS), protein F BM524_01195 PF00114 Pilin (bacterial filament) BM524_01195 PF07963 Prokaryotic N-terminal methylation motif BM524_01200 PF00114 Pilin (bacterial filament) BM524_01200 PF07963 Prokaryotic N-terminal methylation motif BM524_01205 PF00114 Pilin (bacterial filament) BM524_01205 PF07963 Prokaryotic N-terminal methylation motif BM524_01235 PF04085 rod shape-determining protein MreC BM524_01240 PF04093 rod shape-determining protein MreD BM524_01245 PF02545 Maf-like protein BM524_01250 PF10150 Ribonuclease E/G family BM524_01250 PF00575 S1 RNA binding domain BM524_01260 PF00795 Carbon-nitrogen hydrolase BM524_01265 PF01523 Putative modulator of DNA gyrase BM524_01270 PF04751 Protein of unknown function (DUF615) BM524_01275 PF01523 Putative modulator of DNA gyrase BM524_01285 PF16353 Domain of unknown function(DUF4981) BM524_01285 PF02929 Beta galactosidase small chain BM524_01285 PF02837 Glycosyl hydrolases family 2, sugar binding domain BM524_01285 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BM524_01285 PF00703 Glycosyl hydrolases family 2 BM524_01290 PF00072 Response regulator receiver domain BM524_01290 PF00486 Transcriptional regulatory protein, C terminal BM524_01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_01295 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM524_01295 PF00512 His Kinase A (phospho-acceptor) domain BM524_01300 PF08323 Starch synthase catalytic domain BM524_01300 PF00534 Glycosyl transferases group 1 BM524_01305 PF05175 Methyltransferase small domain BM524_01305 PF08468 Methyltransferase small domain N-terminal BM524_01310 PF02390 Putative methyltransferase BM524_01315 PF00561 alpha/beta hydrolase fold BM524_01320 PF14815 NUDIX domain BM524_01320 PF00730 HhH-GPD superfamily base excision DNA repair protein BM524_01320 PF00633 Helix-hairpin-helix motif BM524_01325 PF04362 Bacterial Fe(2+) trafficking BM524_01355 PF00239 Resolvase, N terminal domain BM524_01355 PF02796 Helix-turn-helix domain of resolvase BM524_01370 PF00145 C-5 cytosine-specific DNA methylase BM524_01385 PF17200 Single Cache domain 2 BM524_01385 PF00672 HAMP domain BM524_01385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_01390 PF00072 Response regulator receiver domain BM524_01395 PF01627 Hpt domain BM524_01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_01395 PF02895 Signal transducing histidine kinase, homodimeric domain BM524_01395 PF09078 CheY binding BM524_01395 PF01584 CheW-like domain BM524_01400 PF01584 CheW-like domain BM524_01405 PF13426 PAS domain BM524_01405 PF08447 PAS fold BM524_01405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_01410 PF03705 CheR methyltransferase, all-alpha domain BM524_01410 PF01739 CheR methyltransferase, SAM binding domain BM524_01415 PF03975 CheD chemotactic sensory transduction BM524_01420 PF00072 Response regulator receiver domain BM524_01420 PF01339 CheB methylesterase BM524_01425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_01425 PF17200 Single Cache domain 2 BM524_01425 PF00672 HAMP domain BM524_01430 PF00072 Response regulator receiver domain BM524_01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_01435 PF02895 Signal transducing histidine kinase, homodimeric domain BM524_01435 PF09078 CheY binding BM524_01435 PF01584 CheW-like domain BM524_01435 PF01627 Hpt domain BM524_01440 PF01584 CheW-like domain BM524_01445 PF08447 PAS fold BM524_01445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_01445 PF13426 PAS domain BM524_01450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_01450 PF13426 PAS domain BM524_01450 PF08447 PAS fold BM524_01455 PF03705 CheR methyltransferase, all-alpha domain BM524_01455 PF01739 CheR methyltransferase, SAM binding domain BM524_01460 PF03975 CheD chemotactic sensory transduction BM524_01465 PF00072 Response regulator receiver domain BM524_01465 PF01339 CheB methylesterase BM524_01485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BM524_01485 PF00356 Bacterial regulatory proteins, lacI family BM524_01495 PF01204 Trehalase BM524_01510 PF13419 Haloacid dehalogenase-like hydrolase BM524_01515 PF13426 PAS domain BM524_01515 PF08448 PAS fold BM524_01515 PF00512 His Kinase A (phospho-acceptor) domain BM524_01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_01515 PF00072 Response regulator receiver domain BM524_01530 PF00356 Bacterial regulatory proteins, lacI family BM524_01535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM524_01535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM524_01545 PF03825 Nucleoside H+ symporter BM524_01550 PF01261 Xylose isomerase-like TIM barrel BM524_01555 PF05199 GMC oxidoreductase BM524_01555 PF00732 GMC oxidoreductase BM524_01570 PF00465 Iron-containing alcohol dehydrogenase BM524_01600 PF01063 Amino-transferase class IV BM524_01605 PF00300 Histidine phosphatase superfamily (branch 1) BM524_01615 PF00330 Aconitase family (aconitate hydratase) BM524_01615 PF00694 Aconitase C-terminal domain BM524_01625 PF00437 Type II/IV secretion system protein BM524_01630 PF00338 Ribosomal protein S10p/S20e BM524_01635 PF00297 Ribosomal protein L3 BM524_01640 PF00573 Ribosomal protein L4/L1 family BM524_01645 PF00276 Ribosomal protein L23 BM524_01650 PF00181 Ribosomal Proteins L2, RNA binding domain BM524_01650 PF03947 Ribosomal Proteins L2, C-terminal domain BM524_01655 PF00203 Ribosomal protein S19 BM524_01660 PF00237 Ribosomal protein L22p/L17e BM524_01665 PF00189 Ribosomal protein S3, C-terminal domain BM524_01665 PF07650 KH domain BM524_01670 PF00252 Ribosomal protein L16p/L10e BM524_01675 PF00831 Ribosomal L29 protein BM524_01680 PF00366 Ribosomal protein S17 BM524_01685 PF00534 Glycosyl transferases group 1 BM524_01685 PF13439 Glycosyltransferase Family 4 BM524_01695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BM524_01695 PF00534 Glycosyl transferases group 1 BM524_01715 PF02743 Cache domain BM524_01715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_01715 PF00672 HAMP domain BM524_01720 PF01432 Peptidase family M3 BM524_01730 PF01842 ACT domain BM524_01730 PF00551 Formyl transferase BM524_01740 PF00271 Helicase conserved C-terminal domain BM524_01740 PF04408 Helicase associated domain (HA2) BM524_01740 PF00270 DEAD/DEAH box helicase BM524_01740 PF08482 ATP-dependent helicase C-terminal BM524_01745 PF13406 Transglycosylase SLT domain BM524_01750 PF14814 Bifunctional transglycosylase second domain BM524_01750 PF00905 Penicillin binding protein transpeptidase domain BM524_01750 PF00912 Transglycosylase BM524_01760 PF05661 Protein of unknown function (DUF808) BM524_01770 PF12833 Helix-turn-helix domain BM524_01780 PF00543 Nitrogen regulatory protein P-II BM524_01785 PF00909 Ammonium Transporter Family BM524_01795 PF04261 Dyp-type peroxidase family BM524_01800 PF00672 HAMP domain BM524_01800 PF00211 Adenylate and Guanylate cyclase catalytic domain BM524_01805 PF00202 Aminotransferase class-III BM524_01810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BM524_01810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BM524_01825 PF00873 AcrB/AcrD/AcrF family BM524_01835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM524_01835 PF01627 Hpt domain BM524_01835 PF00512 His Kinase A (phospho-acceptor) domain BM524_01835 PF00072 Response regulator receiver domain BM524_01835 PF00672 HAMP domain BM524_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_01840 PF00521 DNA gyrase/topoisomerase IV, subunit A BM524_01840 PF03989 DNA gyrase C-terminal domain, beta-propeller BM524_01850 PF03707 Bacterial signalling protein N terminal repeat BM524_01850 PF00990 Diguanylate cyclase, GGDEF domain BM524_01850 PF00563 EAL domain BM524_01850 PF13188 PAS domain BM524_01860 PF00171 Aldehyde dehydrogenase family BM524_01865 PF04958 Arginine N-succinyltransferase beta subunit BM524_01870 PF00202 Aminotransferase class-III BM524_01880 PF00117 Glutamine amidotransferase class-I BM524_01885 PF00579 tRNA synthetases class I (W and Y) BM524_01890 PF00834 Ribulose-phosphate 3 epimerase family BM524_01910 PF02086 D12 class N6 adenine-specific DNA methyltransferase BM524_01920 PF01761 3-dehydroquinate synthase BM524_01925 PF01202 Shikimate kinase BM524_01930 PF07660 Secretin and TonB N terminus short domain BM524_01930 PF11741 AMIN domain BM524_01930 PF00263 Bacterial type II and III secretion system protein BM524_01930 PF03958 Bacterial type II/III secretion system short domain BM524_01955 PF17092 Penicillin-binding protein OB-like domain BM524_01955 PF00912 Transglycosylase BM524_01955 PF00905 Penicillin binding protein transpeptidase domain BM524_01960 PF00390 Malic enzyme, N-terminal domain BM524_01960 PF03949 Malic enzyme, NAD binding domain BM524_01970 PF02798 Glutathione S-transferase, N-terminal domain BM524_01980 PF00199 Catalase BM524_01980 PF06628 Catalase-related immune-responsive BM524_02005 PF03707 Bacterial signalling protein N terminal repeat BM524_02005 PF00990 Diguanylate cyclase, GGDEF domain BM524_02005 PF00563 EAL domain BM524_02010 PF00696 Amino acid kinase family BM524_02010 PF00583 Acetyltransferase (GNAT) family BM524_02015 PF00206 Lyase BM524_02015 PF14698 Argininosuccinate lyase C-terminal BM524_02020 PF00764 Arginosuccinate synthase BM524_02025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BM524_02025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BM524_02030 PF00696 Amino acid kinase family BM524_02035 PF01118 Semialdehyde dehydrogenase, NAD binding domain BM524_02035 PF02774 Semialdehyde dehydrogenase, dimerisation domain BM524_02040 PF02142 MGS-like domain BM524_02050 PF00486 Transcriptional regulatory protein, C terminal BM524_02050 PF00072 Response regulator receiver domain BM524_02055 PF00672 HAMP domain BM524_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_02055 PF00512 His Kinase A (phospho-acceptor) domain BM524_02055 PF16527 Two-component sensor protein CpxA, periplasmic domain BM524_02060 PF12146 Serine aminopeptidase, S33 BM524_02065 PF00588 SpoU rRNA Methylase family BM524_02075 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BM524_02075 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BM524_02080 PF02556 Preprotein translocase subunit SecB BM524_02085 PF00462 Glutaredoxin BM524_02090 PF00581 Rhodanese-like domain BM524_02095 PF01551 Peptidase family M23 BM524_02100 PF04748 Divergent polysaccharide deacetylase BM524_02120 PF02666 Phosphatidylserine decarboxylase BM524_02125 PF03193 RsgA GTPase BM524_02130 PF00929 Exonuclease BM524_02150 PF07715 TonB-dependent Receptor Plug Domain BM524_02150 PF00593 TonB dependent receptor BM524_02155 PF13181 Tetratricopeptide repeat BM524_02170 PF00205 Thiamine pyrophosphate enzyme, central domain BM524_02170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BM524_02170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BM524_02175 PF10369 Small subunit of acetolactate synthase BM524_02185 PF02416 mttA/Hcf106 family BM524_02190 PF02416 mttA/Hcf106 family BM524_02195 PF00902 Sec-independent protein translocase protein (TatC) BM524_02205 PF01026 TatD related DNase BM524_02210 PF00563 EAL domain BM524_02210 PF01590 GAF domain BM524_02210 PF00360 Phytochrome region BM524_02210 PF00990 Diguanylate cyclase, GGDEF domain BM524_02215 PF00490 Delta-aminolevulinic acid dehydratase BM524_02220 PF02541 Ppx/GppA phosphatase family BM524_02225 PF00271 Helicase conserved C-terminal domain BM524_02225 PF00270 DEAD/DEAH box helicase BM524_02230 PF00085 Thioredoxin BM524_02235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM524_02235 PF07497 Rho termination factor, RNA-binding domain BM524_02235 PF07498 Rho termination factor, N-terminal domain BM524_02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_02245 PF00072 Response regulator receiver domain BM524_02245 PF09308 LuxQ, periplasmic BM524_02245 PF00512 His Kinase A (phospho-acceptor) domain BM524_02250 PF06965 Na+/H+ antiporter 1 BM524_02255 PF00731 AIR carboxylase BM524_02260 PF02222 ATP-grasp domain BM524_02260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BM524_02275 PF00210 Ferritin-like domain BM524_02280 PF07995 Glucose / Sorbosone dehydrogenase BM524_02285 PF07676 WD40-like Beta Propeller Repeat BM524_02285 PF00326 Prolyl oligopeptidase family BM524_02295 PF00085 Thioredoxin BM524_02310 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BM524_02315 PF00709 Adenylosuccinate synthetase BM524_02320 PF00171 Aldehyde dehydrogenase family BM524_02345 PF03553 Na+/H+ antiporter family BM524_02350 PF00933 Glycosyl hydrolase family 3 N terminal domain BM524_02360 PF07075 Protein of unknown function (DUF1343) BM524_02365 PF01380 SIS domain BM524_02370 PF00842 Alanine racemase, C-terminal domain BM524_02370 PF01168 Alanine racemase, N-terminal domain BM524_02375 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BM524_02385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM524_02410 PF08274 PhnA Zinc-Ribbon BM524_02410 PF03831 PhnA domain BM524_02415 PF00583 Acetyltransferase (GNAT) family BM524_02445 PF13495 Phage integrase, N-terminal SAM-like domain BM524_02445 PF00589 Phage integrase family BM524_02450 PF00108 Thiolase, N-terminal domain BM524_02450 PF02803 Thiolase, C-terminal domain BM524_02455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM524_02455 PF00378 Enoyl-CoA hydratase/isomerase BM524_02455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM524_02460 PF14718 Soluble lytic murein transglycosylase L domain BM524_02460 PF01464 Transglycosylase SLT domain BM524_02465 PF00557 Metallopeptidase family M24 BM524_02475 PF00348 Polyprenyl synthetase BM524_02480 PF00829 Ribosomal prokaryotic L21 protein BM524_02485 PF01016 Ribosomal L27 protein BM524_02490 PF01018 GTP1/OBG BM524_02490 PF01926 50S ribosome-binding GTPase BM524_02495 PF00186 Dihydrofolate reductase BM524_02500 PF04545 Sigma-70, region 4 BM524_02500 PF04539 Sigma-70 region 3 BM524_02500 PF00140 Sigma-70 factor, region 1.2 BM524_02500 PF04542 Sigma-70 region 2 BM524_02505 PF01551 Peptidase family M23 BM524_02505 PF01476 LysM domain BM524_02510 PF09335 SNARE associated Golgi protein BM524_02520 PF01142 tRNA pseudouridine synthase D (TruD) BM524_02525 PF02542 YgbB family BM524_02530 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BM524_02535 PF04977 Septum formation initiator BM524_02545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_02545 PF17200 Single Cache domain 2 BM524_02545 PF00672 HAMP domain BM524_02555 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BM524_02555 PF14850 DNA-binding domain of Proline dehydrogenase BM524_02555 PF01619 Proline dehydrogenase BM524_02555 PF00171 Aldehyde dehydrogenase family BM524_02575 PF02976 DNA mismatch repair enzyme MutH BM524_02580 PF00293 NUDIX domain BM524_02585 PF01590 GAF domain BM524_02585 PF00391 PEP-utilising enzyme, mobile domain BM524_02585 PF02896 PEP-utilising enzyme, TIM barrel domain BM524_02585 PF05524 PEP-utilising enzyme, N-terminal BM524_02590 PF01925 Sulfite exporter TauE/SafE BM524_02595 PF01790 Prolipoprotein diacylglyceryl transferase BM524_02600 PF00303 Thymidylate synthase BM524_02605 PF00072 Response regulator receiver domain BM524_02610 PF00072 Response regulator receiver domain BM524_02610 PF00990 Diguanylate cyclase, GGDEF domain BM524_02615 PF07690 Major Facilitator Superfamily BM524_02630 PF00849 RNA pseudouridylate synthase BM524_02635 PF18339 RapA N-terminal Tudor like domain 1 BM524_02635 PF00271 Helicase conserved C-terminal domain BM524_02635 PF12137 RNA polymerase recycling family C-terminal BM524_02635 PF00176 SNF2 family N-terminal domain BM524_02635 PF18337 RapA N-terminal Tudor like domain BM524_02645 PF02562 PhoH-like protein BM524_02645 PF13638 PIN domain BM524_02655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BM524_02655 PF10414 Sirohaem synthase dimerisation region BM524_02660 PF03880 DbpA RNA binding domain BM524_02660 PF00270 DEAD/DEAH box helicase BM524_02660 PF00271 Helicase conserved C-terminal domain BM524_02675 PF02321 Outer membrane efflux protein BM524_02680 PF00293 NUDIX domain BM524_02690 PF00149 Calcineurin-like phosphoesterase BM524_02695 PF05728 Uncharacterised protein family (UPF0227) BM524_02700 PF01751 Toprim domain BM524_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_02700 PF00986 DNA gyrase B subunit, carboxyl terminus BM524_02700 PF00204 DNA gyrase B BM524_02710 PF13419 Haloacid dehalogenase-like hydrolase BM524_02735 PF04055 Radical SAM superfamily BM524_02745 PF00152 tRNA synthetases class II (D, K and N) BM524_02750 PF07715 TonB-dependent Receptor Plug Domain BM524_02750 PF00593 TonB dependent receptor BM524_02760 PF13302 Acetyltransferase (GNAT) domain BM524_02765 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BM524_02770 PF05175 Methyltransferase small domain BM524_02780 PF01722 BolA-like protein BM524_02785 PF01569 PAP2 superfamily BM524_02795 PF08376 Nitrate and nitrite sensing BM524_02795 PF03861 ANTAR domain BM524_02810 PF01740 STAS domain BM524_02810 PF00916 Sulfate permease family BM524_02815 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_02815 PF04324 BFD-like [2Fe-2S] binding domain BM524_02815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BM524_02815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BM524_02815 PF18267 Rubredoxin NAD+ reductase C-terminal domain BM524_02825 PF04324 BFD-like [2Fe-2S] binding domain BM524_02825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BM524_02825 PF00384 Molybdopterin oxidoreductase BM524_02825 PF01568 Molydopterin dinucleotide binding domain BM524_02830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BM524_02830 PF14824 Sirohaem biosynthesis protein central BM524_02830 PF10414 Sirohaem synthase dimerisation region BM524_02835 PF02885 Glycosyl transferase family, helical bundle domain BM524_02835 PF00591 Glycosyl transferase family, a/b domain BM524_02840 PF08447 PAS fold BM524_02840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_02840 PF13426 PAS domain BM524_02845 PF00005 ABC transporter BM524_02850 PF00528 Binding-protein-dependent transport system inner membrane component BM524_02855 PF00005 ABC transporter BM524_02870 PF01323 DSBA-like thioredoxin domain BM524_02875 PF00593 TonB dependent receptor BM524_02875 PF07715 TonB-dependent Receptor Plug Domain BM524_02880 PF01636 Phosphotransferase enzyme family BM524_02885 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BM524_02885 PF13746 4Fe-4S dicluster domain BM524_02885 PF12801 4Fe-4S binding domain BM524_02900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM524_02900 PF02770 Acyl-CoA dehydrogenase, middle domain BM524_02900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM524_02900 PF12806 Acetyl-CoA dehydrogenase C-terminal like BM524_02915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BM524_02915 PF13378 Enolase C-terminal domain-like BM524_02920 PF00596 Class II Aldolase and Adducin N-terminal domain BM524_02930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM524_02935 PF00873 AcrB/AcrD/AcrF family BM524_02950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_02950 PF02743 Cache domain BM524_02950 PF00672 HAMP domain BM524_02955 PF04546 Sigma-70, non-essential region BM524_02955 PF03979 Sigma-70 factor, region 1.1 BM524_02955 PF00140 Sigma-70 factor, region 1.2 BM524_02955 PF04542 Sigma-70 region 2 BM524_02955 PF04539 Sigma-70 region 3 BM524_02955 PF04545 Sigma-70, region 4 BM524_02960 PF10410 DnaB-helicase binding domain of primase BM524_02960 PF01807 CHC2 zinc finger BM524_02960 PF08275 DNA primase catalytic core, N-terminal domain BM524_02960 PF08278 DNA primase DnaG DnaB-binding BM524_02965 PF09424 Yqey-like protein BM524_02970 PF01165 Ribosomal protein S21 BM524_02975 PF00814 Glycoprotease family BM524_02985 PF02660 Glycerol-3-phosphate acyltransferase BM524_02990 PF02152 Dihydroneopterin aldolase BM524_03000 PF02673 Bacitracin resistance protein BacA BM524_03005 PF01230 HIT domain BM524_03020 PF03594 Benzoate membrane transport protein BM524_03025 PF07883 Cupin domain BM524_03025 PF01381 Helix-turn-helix BM524_03030 PF04381 Putative exonuclease, RdgC BM524_03035 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM524_03035 PF00512 His Kinase A (phospho-acceptor) domain BM524_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_03040 PF00072 Response regulator receiver domain BM524_03040 PF00486 Transcriptional regulatory protein, C terminal BM524_03045 PF00512 His Kinase A (phospho-acceptor) domain BM524_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_03045 PF00989 PAS fold BM524_03045 PF11808 Phosphate regulon sensor protein PhoR BM524_03050 PF12849 PBP superfamily domain BM524_03070 PF01618 MotA/TolQ/ExbB proton channel family BM524_03075 PF01618 MotA/TolQ/ExbB proton channel family BM524_03080 PF02472 Biopolymer transport protein ExbD/TolR BM524_03085 PF03544 Gram-negative bacterial TonB protein C-terminal BM524_03095 PF00072 Response regulator receiver domain BM524_03100 PF01627 Hpt domain BM524_03100 PF00072 Response regulator receiver domain BM524_03100 PF00672 HAMP domain BM524_03100 PF00512 His Kinase A (phospho-acceptor) domain BM524_03100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM524_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_03105 PF13193 AMP-binding enzyme C-terminal domain BM524_03105 PF00501 AMP-binding enzyme BM524_03115 PF07995 Glucose / Sorbosone dehydrogenase BM524_03120 PF06434 Aconitate hydratase 2 N-terminus BM524_03120 PF11791 Aconitate B N-terminal domain BM524_03120 PF00330 Aconitase family (aconitate hydratase) BM524_03125 PF01048 Phosphorylase superfamily BM524_03145 PF11791 Aconitate B N-terminal domain BM524_03145 PF00330 Aconitase family (aconitate hydratase) BM524_03145 PF06434 Aconitate hydratase 2 N-terminus BM524_03155 PF01842 ACT domain BM524_03155 PF00696 Amino acid kinase family BM524_03160 PF00672 HAMP domain BM524_03160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_03165 PF00149 Calcineurin-like phosphoesterase BM524_03170 PF04379 ApaG domain BM524_03175 PF00398 Ribosomal RNA adenine dimethylase BM524_03180 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BM524_03185 PF00639 PPIC-type PPIASE domain BM524_03185 PF09312 SurA N-terminal domain BM524_03190 PF04453 LPS transport system D BM524_03190 PF03968 OstA-like protein BM524_03195 PF00226 DnaJ domain BM524_03195 PF05099 Tellurite resistance protein TerB BM524_03200 PF02899 Phage integrase, N-terminal SAM-like domain BM524_03200 PF00589 Phage integrase family BM524_03205 PF13098 Thioredoxin-like domain BM524_03205 PF10411 Disulfide bond isomerase protein N-terminus BM524_03210 PF17768 RecJ OB domain BM524_03210 PF02272 DHHA1 domain BM524_03210 PF01368 DHH family BM524_03220 PF11967 Recombination protein O N terminal BM524_03220 PF02565 Recombination protein O C terminal BM524_03225 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BM524_03230 PF01648 4'-phosphopantetheinyl transferase superfamily BM524_03235 PF05958 tRNA (Uracil-5-)-methyltransferase BM524_03240 PF02824 TGS domain BM524_03240 PF13291 ACT domain BM524_03240 PF04607 Region found in RelA / SpoT proteins BM524_03245 PF03819 MazG nucleotide pyrophosphohydrolase domain BM524_03265 PF00572 Ribosomal protein L13 BM524_03270 PF00380 Ribosomal protein S9/S16 BM524_03275 PF00355 Rieske [2Fe-2S] domain BM524_03275 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BM524_03280 PF00033 Cytochrome b/b6/petB BM524_03280 PF00032 Cytochrome b(C-terminal)/b6/petD BM524_03285 PF02167 Cytochrome C1 family BM524_03290 PF00043 Glutathione S-transferase, C-terminal domain BM524_03290 PF02798 Glutathione S-transferase, N-terminal domain BM524_03295 PF04386 Stringent starvation protein B BM524_03310 PF00486 Transcriptional regulatory protein, C terminal BM524_03310 PF00072 Response regulator receiver domain BM524_03315 PF00571 CBS domain BM524_03315 PF03448 MgtE intracellular N domain BM524_03315 PF01769 Divalent cation transporter BM524_03320 PF00381 PTS HPr component phosphorylation site BM524_03325 PF03668 P-loop ATPase protein family BM524_03330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BM524_03335 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BM524_03340 PF00309 Sigma-54 factor, Activator interacting domain (AID) BM524_03340 PF04963 Sigma-54 factor, core binding domain BM524_03340 PF04552 Sigma-54, DNA binding domain BM524_03345 PF00005 ABC transporter BM524_03345 PF12399 Branched-chain amino acid ATP-binding cassette transporter BM524_03350 PF03968 OstA-like protein BM524_03365 PF00571 CBS domain BM524_03365 PF01380 SIS domain BM524_03370 PF01699 Sodium/calcium exchanger protein BM524_03375 PF00005 ABC transporter BM524_03380 PF02405 Permease MlaE BM524_03385 PF02470 MlaD protein BM524_03390 PF05494 MlaC protein BM524_03400 PF01722 BolA-like protein BM524_03405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BM524_03410 PF13180 PDZ domain BM524_03415 PF00595 PDZ domain BM524_03415 PF13180 PDZ domain BM524_03425 PF03969 AFG1-like ATPase BM524_03430 PF01709 Transcriptional regulator BM524_03445 PF00563 EAL domain BM524_03445 PF00990 Diguanylate cyclase, GGDEF domain BM524_03445 PF03707 Bacterial signalling protein N terminal repeat BM524_03450 PF00881 Nitroreductase family BM524_03460 PF07549 SecD/SecF GG Motif BM524_03460 PF02355 Protein export membrane protein BM524_03465 PF02080 TrkA-C domain BM524_03465 PF00999 Sodium/hydrogen exchanger family BM524_03465 PF03471 Transporter associated domain BM524_03475 PF00593 TonB dependent receptor BM524_03475 PF07715 TonB-dependent Receptor Plug Domain BM524_03480 PF00892 EamA-like transporter family BM524_03485 PF00072 Response regulator receiver domain BM524_03485 PF09308 LuxQ, periplasmic BM524_03485 PF00512 His Kinase A (phospho-acceptor) domain BM524_03485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_03490 PF13458 Periplasmic binding protein BM524_03505 PF02773 S-adenosylmethionine synthetase, C-terminal domain BM524_03505 PF02772 S-adenosylmethionine synthetase, central domain BM524_03505 PF00438 S-adenosylmethionine synthetase, N-terminal domain BM524_03510 PF02780 Transketolase, C-terminal domain BM524_03510 PF02779 Transketolase, pyrimidine binding domain BM524_03510 PF00456 Transketolase, thiamine diphosphate binding domain BM524_03515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM524_03515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BM524_03520 PF00162 Phosphoglycerate kinase BM524_03525 PF00274 Fructose-bisphosphate aldolase class-I BM524_03535 PF07676 WD40-like Beta Propeller Repeat BM524_03535 PF00326 Prolyl oligopeptidase family BM524_03540 PF02541 Ppx/GppA phosphatase family BM524_03545 PF17941 Polyphosphate kinase C-terminal domain 1 BM524_03545 PF13090 Polyphosphate kinase C-terminal domain 2 BM524_03545 PF13089 Polyphosphate kinase N-terminal domain BM524_03545 PF02503 Polyphosphate kinase middle domain BM524_03555 PF00528 Binding-protein-dependent transport system inner membrane component BM524_03560 PF00528 Binding-protein-dependent transport system inner membrane component BM524_03565 PF00005 ABC transporter BM524_03570 PF01895 PhoU domain BM524_03575 PF01384 Phosphate transporter family BM524_03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_03585 PF03466 LysR substrate binding domain BM524_03595 PF03006 Haemolysin-III related BM524_03600 PF01047 MarR family BM524_03605 PF02566 OsmC-like protein BM524_03610 PF01433 Peptidase family M1 domain BM524_03620 PF09186 Domain of unknown function (DUF1949) BM524_03620 PF01205 Uncharacterized protein family UPF0029 BM524_03630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_03630 PF03466 LysR substrate binding domain BM524_03635 PF00248 Aldo/keto reductase family BM524_03645 PF00128 Alpha amylase, catalytic domain BM524_03645 PF02806 Alpha amylase, C-terminal all-beta domain BM524_03645 PF03714 Bacterial pullanase-associated domain BM524_03650 PF00149 Calcineurin-like phosphoesterase BM524_03650 PF12320 Type 5 capsule protein repressor C-terminal domain BM524_03655 PF13476 AAA domain BM524_03665 PF00375 Sodium:dicarboxylate symporter family BM524_03680 PF00491 Arginase family BM524_03685 PF01979 Amidohydrolase family BM524_03690 PF00392 Bacterial regulatory proteins, gntR family BM524_03690 PF07702 UTRA domain BM524_03695 PF17391 Urocanase N-terminal domain BM524_03695 PF01175 Urocanase Rossmann-like domain BM524_03695 PF17392 Urocanase C-terminal domain BM524_03700 PF00221 Aromatic amino acid lyase BM524_03725 PF00005 ABC transporter BM524_03725 PF12848 ABC transporter BM524_03750 PF00924 Mechanosensitive ion channel BM524_03765 PF00589 Phage integrase family BM524_03770 PF12894 Anaphase-promoting complex subunit 4 WD40 domain BM524_03770 PF00400 WD domain, G-beta repeat BM524_03810 PF01867 CRISPR associated protein Cas1 BM524_03830 PF09618 CRISPR-associated protein (Cas_Csy4) BM524_03865 PF04172 LrgB-like family BM524_03870 PF00072 Response regulator receiver domain BM524_03895 PF06969 HemN C-terminal domain BM524_03895 PF04055 Radical SAM superfamily BM524_03900 PF01725 Ham1 family BM524_03905 PF00271 Helicase conserved C-terminal domain BM524_03905 PF00270 DEAD/DEAH box helicase BM524_03910 PF01743 Poly A polymerase head domain BM524_03910 PF12627 Probable RNA and SrmB- binding site of polymerase A BM524_03915 PF13401 AAA domain BM524_03915 PF01471 Putative peptidoglycan binding domain BM524_03925 PF01966 HD domain BM524_03925 PF11871 Domain of unknown function (DUF3391) BM524_03930 PF00694 Aconitase C-terminal domain BM524_03935 PF00330 Aconitase family (aconitate hydratase) BM524_03940 PF00180 Isocitrate/isopropylmalate dehydrogenase BM524_03945 PF08502 LeuA allosteric (dimerisation) domain BM524_03945 PF00682 HMGL-like BM524_03960 PF03952 Enolase, N-terminal domain BM524_03960 PF00113 Enolase, C-terminal TIM barrel domain BM524_03965 PF00117 Glutamine amidotransferase class-I BM524_03965 PF06418 CTP synthase N-terminus BM524_03970 PF00488 MutS domain V BM524_03970 PF05190 MutS family domain IV BM524_03970 PF05192 MutS domain III BM524_03970 PF01624 MutS domain I BM524_03970 PF05188 MutS domain II BM524_03975 PF02464 Competence-damaged protein BM524_03980 PF00154 recA bacterial DNA recombination protein BM524_03985 PF00005 ABC transporter BM524_03990 PF12679 ABC-2 family transporter protein BM524_03995 PF00672 HAMP domain BM524_03995 PF00512 His Kinase A (phospho-acceptor) domain BM524_03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_04000 PF00072 Response regulator receiver domain BM524_04000 PF00486 Transcriptional regulatory protein, C terminal BM524_04030 PF00005 ABC transporter BM524_04035 PF03379 CcmB protein BM524_04040 PF01578 Cytochrome C assembly protein BM524_04045 PF04995 Heme exporter protein D (CcmD) BM524_04050 PF03100 CcmE BM524_04055 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BM524_04055 PF01578 Cytochrome C assembly protein BM524_04060 PF08534 Redoxin BM524_04065 PF03918 Cytochrome C biogenesis protein BM524_04075 PF04333 MlaA lipoprotein BM524_04080 PF16363 GDP-mannose 4,6 dehydratase BM524_04090 PF00854 POT family BM524_04100 PF00483 Nucleotidyl transferase BM524_04105 PF10531 SLBB domain BM524_04110 PF00180 Isocitrate/isopropylmalate dehydrogenase BM524_04110 PF18324 Hypothetical protein TT1725 BM524_04125 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BM524_04125 PF11892 Domain of unknown function (DUF3412) BM524_04125 PF03641 Possible lysine decarboxylase BM524_04130 PF00990 Diguanylate cyclase, GGDEF domain BM524_04130 PF00072 Response regulator receiver domain BM524_04135 PF14489 QueF-like protein BM524_04135 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BM524_04140 PF07348 Syd protein (SUKH-2) BM524_04175 PF00849 RNA pseudouridylate synthase BM524_04180 PF00258 Flavodoxin BM524_04185 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BM524_04185 PF00132 Bacterial transferase hexapeptide (six repeats) BM524_04185 PF14602 Hexapeptide repeat of succinyl-transferase BM524_04190 PF01966 HD domain BM524_04190 PF08335 GlnD PII-uridylyltransferase BM524_04190 PF01909 Nucleotidyltransferase domain BM524_04195 PF00557 Metallopeptidase family M24 BM524_04200 PF00318 Ribosomal protein S2 BM524_04205 PF00889 Elongation factor TS BM524_04210 PF00696 Amino acid kinase family BM524_04215 PF01765 Ribosome recycling factor BM524_04220 PF01255 Putative undecaprenyl diphosphate synthase BM524_04230 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BM524_04230 PF13288 DXP reductoisomerase C-terminal domain BM524_04230 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BM524_04235 PF17820 PDZ domain BM524_04235 PF02163 Peptidase family M50 BM524_04240 PF01103 Surface antigen BM524_04240 PF07244 Surface antigen variable number repeat BM524_04245 PF03938 Outer membrane protein (OmpH-like) BM524_04250 PF07977 FabA-like domain BM524_04255 PF00132 Bacterial transferase hexapeptide (six repeats) BM524_04255 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BM524_04260 PF02684 Lipid-A-disaccharide synthetase BM524_04265 PF01351 Ribonuclease HII BM524_04270 PF02811 PHP domain BM524_04270 PF14579 Helix-hairpin-helix motif BM524_04270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM524_04270 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM524_04270 PF01336 OB-fold nucleic acid binding domain BM524_04275 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BM524_04280 PF11734 TilS substrate C-terminal domain BM524_04280 PF01171 PP-loop family BM524_04280 PF09179 TilS substrate binding domain BM524_04285 PF00563 EAL domain BM524_04285 PF00990 Diguanylate cyclase, GGDEF domain BM524_04285 PF03707 Bacterial signalling protein N terminal repeat BM524_04290 PF00999 Sodium/hydrogen exchanger family BM524_04290 PF02080 TrkA-C domain BM524_04290 PF02254 TrkA-N domain BM524_04300 PF14437 MafB19-like deaminase BM524_04305 PF01464 Transglycosylase SLT domain BM524_04305 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM524_04310 PF02769 AIR synthase related protein, C-terminal domain BM524_04310 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BM524_04310 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BM524_04315 PF01713 Smr domain BM524_04335 PF05736 OprF membrane domain BM524_04335 PF00691 OmpA family BM524_04340 PF00664 ABC transporter transmembrane region BM524_04340 PF03412 Peptidase C39 family BM524_04340 PF00005 ABC transporter BM524_04345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM524_04345 PF00529 HlyD membrane-fusion protein of T1SS BM524_04350 PF00072 Response regulator receiver domain BM524_04350 PF00196 Bacterial regulatory proteins, luxR family BM524_04390 PF00072 Response regulator receiver domain BM524_04390 PF01584 CheW-like domain BM524_04395 PF03705 CheR methyltransferase, all-alpha domain BM524_04395 PF01739 CheR methyltransferase, SAM binding domain BM524_04400 PF00460 Flagella basal body rod protein BM524_04405 PF00460 Flagella basal body rod protein BM524_04405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM524_04410 PF13861 FlgD Tudor-like domain BM524_04410 PF13860 FlgD Ig-like domain BM524_04410 PF03963 Flagellar hook capping protein - N-terminal region BM524_04415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM524_04415 PF07559 Flagellar basal body protein FlaE BM524_04415 PF00460 Flagella basal body rod protein BM524_04420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM524_04420 PF00460 Flagella basal body rod protein BM524_04425 PF00460 Flagella basal body rod protein BM524_04425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM524_04430 PF02107 Flagellar L-ring protein BM524_04435 PF02119 Flagellar P-ring protein BM524_04440 PF10135 Rod binding protein BM524_04440 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BM524_04460 PF00669 Bacterial flagellin N-terminal helical region BM524_04460 PF07196 Flagellin hook IN motif BM524_04460 PF00700 Bacterial flagellin C-terminal helical region BM524_04465 PF00700 Bacterial flagellin C-terminal helical region BM524_04465 PF00669 Bacterial flagellin N-terminal helical region BM524_04465 PF07196 Flagellin hook IN motif BM524_04470 PF00700 Bacterial flagellin C-terminal helical region BM524_04470 PF00669 Bacterial flagellin N-terminal helical region BM524_04470 PF07196 Flagellin hook IN motif BM524_04475 PF03646 FlaG protein BM524_04480 PF07196 Flagellin hook IN motif BM524_04480 PF02465 Flagellar hook-associated protein 2 N-terminus BM524_04480 PF07195 Flagellar hook-associated protein 2 C-terminus BM524_04485 PF02561 Flagellar protein FliS BM524_04500 PF00535 Glycosyl transferase family 2 BM524_04530 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM524_04535 PF00551 Formyl transferase BM524_04535 PF02911 Formyl transferase, C-terminal domain BM524_04535 PF01370 NAD dependent epimerase/dehydratase family BM524_04540 PF13439 Glycosyltransferase Family 4 BM524_04540 PF00534 Glycosyl transferases group 1 BM524_04545 PF01370 NAD dependent epimerase/dehydratase family BM524_04550 PF16363 GDP-mannose 4,6 dehydratase BM524_04555 PF01501 Glycosyl transferase family 8 BM524_04565 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM524_04570 PF02719 Polysaccharide biosynthesis protein BM524_04585 PF04991 LicD family BM524_04590 PF03102 NeuB family BM524_04590 PF08666 SAF domain BM524_04600 PF02348 Cytidylyltransferase BM524_04610 PF01467 Cytidylyltransferase-like BM524_04615 PF00669 Bacterial flagellin N-terminal helical region BM524_04615 PF00700 Bacterial flagellin C-terminal helical region BM524_04620 PF02954 Bacterial regulatory protein, Fis family BM524_04620 PF00072 Response regulator receiver domain BM524_04620 PF00158 Sigma-54 interaction domain BM524_04625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_04625 PF00989 PAS fold BM524_04625 PF00512 His Kinase A (phospho-acceptor) domain BM524_04630 PF02954 Bacterial regulatory protein, Fis family BM524_04630 PF00158 Sigma-54 interaction domain BM524_04635 PF02049 Flagellar hook-basal body complex protein FliE BM524_04640 PF01514 Secretory protein of YscJ/FliF family BM524_04640 PF08345 Flagellar M-ring protein C-terminal BM524_04645 PF14841 FliG middle domain BM524_04645 PF14842 FliG N-terminal domain BM524_04645 PF01706 FliG C-terminal domain BM524_04655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM524_04655 PF18269 T3SS EscN ATPase C-terminal domain BM524_04675 PF02154 Flagellar motor switch protein FliM BM524_04675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BM524_04680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BM524_04685 PF04347 Flagellar biosynthesis protein, FliO BM524_04690 PF00813 FliP family BM524_04695 PF01313 Bacterial export proteins, family 3 BM524_04700 PF01311 Bacterial export proteins, family 1 BM524_04705 PF01312 FlhB HrpN YscU SpaS Family BM524_04710 PF00771 FHIPEP family BM524_04715 PF00448 SRP54-type protein, GTPase domain BM524_04720 PF10609 NUBPL iron-transfer P-loop NTPase BM524_04725 PF04542 Sigma-70 region 2 BM524_04725 PF04545 Sigma-70, region 4 BM524_04725 PF04539 Sigma-70 region 3 BM524_04730 PF00072 Response regulator receiver domain BM524_04735 PF04344 Chemotaxis phosphatase, CheZ BM524_04740 PF07194 P2 response regulator binding domain BM524_04740 PF01627 Hpt domain BM524_04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_04740 PF02895 Signal transducing histidine kinase, homodimeric domain BM524_04740 PF01584 CheW-like domain BM524_04745 PF01339 CheB methylesterase BM524_04745 PF00072 Response regulator receiver domain BM524_04750 PF13614 AAA domain BM524_04760 PF01584 CheW-like domain BM524_04770 PF04204 Homoserine O-succinyltransferase BM524_04775 PF02965 Vitamin B12 dependent methionine synthase, activation domain BM524_04775 PF02607 B12 binding domain BM524_04775 PF02310 B12 binding domain BM524_04775 PF00809 Pterin binding enzyme BM524_04775 PF02574 Homocysteine S-methyltransferase BM524_04780 PF02574 Homocysteine S-methyltransferase BM524_04780 PF02310 B12 binding domain BM524_04780 PF02607 B12 binding domain BM524_04780 PF02965 Vitamin B12 dependent methionine synthase, activation domain BM524_04780 PF00809 Pterin binding enzyme BM524_04790 PF06865 Pyrimidine/purine nucleoside phosphorylase BM524_04795 PF00672 HAMP domain BM524_04795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_04795 PF02743 Cache domain BM524_04800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_04800 PF03466 LysR substrate binding domain BM524_04805 PF03466 LysR substrate binding domain BM524_04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_04810 PF00484 Carbonic anhydrase BM524_04815 PF01740 STAS domain BM524_04815 PF00916 Sulfate permease family BM524_04825 PF13977 BetI-type transcriptional repressor, C-terminal BM524_04825 PF00440 Bacterial regulatory proteins, tetR family BM524_04830 PF05649 Peptidase family M13 BM524_04830 PF01431 Peptidase family M13 BM524_04840 PF02631 RecX family BM524_04845 PF01411 tRNA synthetases class II (A) BM524_04845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BM524_04845 PF02272 DHHA1 domain BM524_04850 PF02599 Global regulator protein family BM524_04875 PF02436 Conserved carboxylase domain BM524_04875 PF00364 Biotin-requiring enzyme BM524_04875 PF00682 HMGL-like BM524_04880 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BM524_04885 PF00005 ABC transporter BM524_04890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BM524_04890 PF00005 ABC transporter BM524_04895 PF00528 Binding-protein-dependent transport system inner membrane component BM524_04895 PF12911 N-terminal TM domain of oligopeptide transport permease C BM524_04900 PF00528 Binding-protein-dependent transport system inner membrane component BM524_04905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BM524_04910 PF02954 Bacterial regulatory protein, Fis family BM524_04910 PF00158 Sigma-54 interaction domain BM524_04915 PF04012 PspA/IM30 family BM524_04930 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BM524_04935 PF18024 Helix-turn-helix domain BM524_04935 PF00158 Sigma-54 interaction domain BM524_04945 PF14497 Glutathione S-transferase, C-terminal domain BM524_04945 PF02798 Glutathione S-transferase, N-terminal domain BM524_04950 PF01037 Lrp/AsnC ligand binding domain BM524_04955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM524_04955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BM524_04970 PF03301 Tryptophan 2,3-dioxygenase BM524_04975 PF00593 TonB dependent receptor BM524_04980 PF00593 TonB dependent receptor BM524_04980 PF07715 TonB-dependent Receptor Plug Domain BM524_05015 PF01618 MotA/TolQ/ExbB proton channel family BM524_05020 PF01618 MotA/TolQ/ExbB proton channel family BM524_05025 PF02472 Biopolymer transport protein ExbD/TolR BM524_05030 PF03544 Gram-negative bacterial TonB protein C-terminal BM524_05040 PF08351 Domain of unknown function (DUF1726) BM524_05040 PF13718 GNAT acetyltransferase 2 BM524_05040 PF17176 tRNA-binding domain BM524_05040 PF05127 Helicase BM524_05065 PF01636 Phosphotransferase enzyme family BM524_05080 PF00583 Acetyltransferase (GNAT) family BM524_05095 PF03466 LysR substrate binding domain BM524_05095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_05100 PF07690 Major Facilitator Superfamily BM524_05110 PF00248 Aldo/keto reductase family BM524_05125 PF13533 Biotin-lipoyl like BM524_05130 PF01047 MarR family BM524_05135 PF16658 Class II release factor RF3, C-terminal domain BM524_05135 PF03144 Elongation factor Tu domain 2 BM524_05135 PF00009 Elongation factor Tu GTP binding domain BM524_05140 PF03485 Arginyl tRNA synthetase N terminal domain BM524_05140 PF00750 tRNA synthetases class I (R) BM524_05140 PF05746 DALR anticodon binding domain BM524_05160 PF00291 Pyridoxal-phosphate dependent enzyme BM524_05185 PF00487 Fatty acid desaturase BM524_05190 PF00111 2Fe-2S iron-sulfur cluster binding domain BM524_05190 PF00175 Oxidoreductase NAD-binding domain BM524_05190 PF00970 Oxidoreductase FAD-binding domain BM524_05200 PF03462 PCRF domain BM524_05200 PF00472 RF-1 domain BM524_05205 PF00152 tRNA synthetases class II (D, K and N) BM524_05205 PF01336 OB-fold nucleic acid binding domain BM524_05210 PF02558 Ketopantoate reductase PanE/ApbA BM524_05210 PF08546 Ketopantoate reductase PanE/ApbA C terminal BM524_05215 PF00849 RNA pseudouridylate synthase BM524_05225 PF00675 Insulinase (Peptidase family M16) BM524_05225 PF05193 Peptidase M16 inactive domain BM524_05230 PF04262 Glutamate-cysteine ligase BM524_05250 PF01713 Smr domain BM524_05255 PF05175 Methyltransferase small domain BM524_05260 PF01264 Chorismate synthase BM524_05270 PF04293 SpoVR like protein BM524_05275 PF04285 Protein of unknown function (DUF444) BM524_05280 PF08298 PrkA AAA domain BM524_05280 PF06798 PrkA serine protein kinase C-terminal domain BM524_05290 PF00462 Glutaredoxin BM524_05295 PF07715 TonB-dependent Receptor Plug Domain BM524_05295 PF00593 TonB dependent receptor BM524_05315 PF04324 BFD-like [2Fe-2S] binding domain BM524_05320 PF00578 AhpC/TSA family BM524_05320 PF10417 C-terminal domain of 1-Cys peroxiredoxin BM524_05325 PF00929 Exonuclease BM524_05330 PF00691 OmpA family BM524_05330 PF18393 MotY N-terminal domain BM524_05335 PF03009 Glycerophosphoryl diester phosphodiesterase family BM524_05340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM524_05345 PF00313 'Cold-shock' DNA-binding domain BM524_05355 PF04389 Peptidase family M28 BM524_05355 PF02225 PA domain BM524_05365 PF00633 Helix-hairpin-helix motif BM524_05365 PF00730 HhH-GPD superfamily base excision DNA repair protein BM524_05370 PF02508 Rnf-Nqr subunit, membrane protein BM524_05375 PF04205 FMN-binding domain BM524_05380 PF03116 NQR2, RnfD, RnfE family BM524_05385 PF13375 RnfC Barrel sandwich hybrid domain BM524_05385 PF10531 SLBB domain BM524_05385 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BM524_05385 PF12838 4Fe-4S dicluster domain BM524_05390 PF04060 Putative Fe-S cluster BM524_05410 PF01554 MatE BM524_05415 PF17757 UvrB interaction domain BM524_05415 PF04851 Type III restriction enzyme, res subunit BM524_05415 PF00271 Helicase conserved C-terminal domain BM524_05415 PF12344 Ultra-violet resistance protein B BM524_05415 PF02151 UvrB/uvrC motif BM524_05425 PF06508 Queuosine biosynthesis protein QueC BM524_05430 PF04055 Radical SAM superfamily BM524_05440 PF13537 Glutamine amidotransferase domain BM524_05440 PF00733 Asparagine synthase BM524_05465 PF02080 TrkA-C domain BM524_05465 PF03600 Citrate transporter BM524_05470 PF00009 Elongation factor Tu GTP binding domain BM524_05475 PF00459 Inositol monophosphatase family BM524_05485 PF01507 Phosphoadenosine phosphosulfate reductase family BM524_05490 PF00474 Sodium:solute symporter family BM524_05505 PF04542 Sigma-70 region 2 BM524_05505 PF08281 Sigma-70, region 4 BM524_05520 PF13519 von Willebrand factor type A domain BM524_05520 PF07584 Aerotolerance regulator N-terminal BM524_05525 PF00092 von Willebrand factor type A domain BM524_05535 PF01882 Protein of unknown function DUF58 BM524_05540 PF17863 AAA lid domain BM524_05540 PF07726 ATPase family associated with various cellular activities (AAA) BM524_05545 PF00108 Thiolase, N-terminal domain BM524_05545 PF02803 Thiolase, C-terminal domain BM524_05550 PF00378 Enoyl-CoA hydratase/isomerase BM524_05550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM524_05550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM524_05560 PF00990 Diguanylate cyclase, GGDEF domain BM524_05560 PF03707 Bacterial signalling protein N terminal repeat BM524_05560 PF00563 EAL domain BM524_05565 PF00675 Insulinase (Peptidase family M16) BM524_05565 PF05193 Peptidase M16 inactive domain BM524_05570 PF00300 Histidine phosphatase superfamily (branch 1) BM524_05580 PF00571 CBS domain BM524_05580 PF01595 Cyclin M transmembrane N-terminal domain BM524_05580 PF03471 Transporter associated domain BM524_05585 PF01578 Cytochrome C assembly protein BM524_05590 PF00448 SRP54-type protein, GTPase domain BM524_05590 PF02881 SRP54-type protein, helical bundle domain BM524_05590 PF02978 Signal peptide binding domain BM524_05630 PF00873 AcrB/AcrD/AcrF family BM524_05635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM524_05640 PF00664 ABC transporter transmembrane region BM524_05640 PF00005 ABC transporter BM524_05655 PF00886 Ribosomal protein S16 BM524_05660 PF05239 PRC-barrel domain BM524_05660 PF01782 RimM N-terminal domain BM524_05665 PF01746 tRNA (Guanine-1)-methyltransferase BM524_05670 PF01245 Ribosomal protein L19 BM524_05675 PF03458 UPF0126 domain BM524_05680 PF00378 Enoyl-CoA hydratase/isomerase BM524_05685 PF00793 DAHP synthetase I family BM524_05690 PF01817 Chorismate mutase type II BM524_05690 PF02153 Prephenate dehydrogenase BM524_05695 PF00800 Prephenate dehydratase BM524_05695 PF01817 Chorismate mutase type II BM524_05700 PF00072 Response regulator receiver domain BM524_05705 PF01253 Translation initiation factor SUI1 BM524_05715 PF00486 Transcriptional regulatory protein, C terminal BM524_05715 PF00072 Response regulator receiver domain BM524_05725 PF03707 Bacterial signalling protein N terminal repeat BM524_05725 PF00990 Diguanylate cyclase, GGDEF domain BM524_05725 PF00563 EAL domain BM524_05735 PF00512 His Kinase A (phospho-acceptor) domain BM524_05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_05745 PF00158 Sigma-54 interaction domain BM524_05745 PF00072 Response regulator receiver domain BM524_05750 PF00669 Bacterial flagellin N-terminal helical region BM524_05750 PF00700 Bacterial flagellin C-terminal helical region BM524_05750 PF07196 Flagellin hook IN motif BM524_05765 PF01336 OB-fold nucleic acid binding domain BM524_05765 PF02938 GAD domain BM524_05765 PF00152 tRNA synthetases class II (D, K and N) BM524_05770 PF00293 NUDIX domain BM524_05775 PF02075 Crossover junction endodeoxyribonuclease RuvC BM524_05785 PF05496 Holliday junction DNA helicase RuvB P-loop domain BM524_05785 PF05491 RuvB C-terminal winged helix domain BM524_05785 PF17864 RuvB AAA lid domain BM524_05790 PF03061 Thioesterase superfamily BM524_05795 PF01618 MotA/TolQ/ExbB proton channel family BM524_05800 PF02472 Biopolymer transport protein ExbD/TolR BM524_05810 PF07676 WD40-like Beta Propeller Repeat BM524_05810 PF04052 TolB amino-terminal domain BM524_05815 PF00691 OmpA family BM524_05820 PF16331 TolA binding protein trimerisation BM524_05820 PF13174 Tetratricopeptide repeat BM524_05840 PF02445 Quinolinate synthetase A protein BM524_05855 PF01734 Patatin-like phospholipase BM524_05860 PF08546 Ketopantoate reductase PanE/ApbA C terminal BM524_05860 PF02558 Ketopantoate reductase PanE/ApbA BM524_05870 PF00072 Response regulator receiver domain BM524_05870 PF09308 LuxQ, periplasmic BM524_05870 PF00512 His Kinase A (phospho-acceptor) domain BM524_05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_05880 PF01118 Semialdehyde dehydrogenase, NAD binding domain BM524_05880 PF02774 Semialdehyde dehydrogenase, dimerisation domain BM524_05885 PF00106 short chain dehydrogenase BM524_05890 PF01292 Prokaryotic cytochrome b561 BM524_05905 PF00990 Diguanylate cyclase, GGDEF domain BM524_05905 PF03707 Bacterial signalling protein N terminal repeat BM524_05905 PF00563 EAL domain BM524_05920 PF03466 LysR substrate binding domain BM524_05920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_05925 PF00107 Zinc-binding dehydrogenase BM524_05925 PF08240 Alcohol dehydrogenase GroES-like domain BM524_05930 PF01863 Protein of unknown function DUF45 BM524_05935 PF00571 CBS domain BM524_05940 PF00873 AcrB/AcrD/AcrF family BM524_05950 PF00440 Bacterial regulatory proteins, tetR family BM524_05950 PF08361 MAATS-type transcriptional repressor, C-terminal region BM524_05955 PF07715 TonB-dependent Receptor Plug Domain BM524_05955 PF00593 TonB dependent receptor BM524_05965 PF00873 AcrB/AcrD/AcrF family BM524_05975 PF00990 Diguanylate cyclase, GGDEF domain BM524_05985 PF02470 MlaD protein BM524_05990 PF04403 Paraquat-inducible protein A BM524_06005 PF00106 short chain dehydrogenase BM524_06010 PF06719 AraC-type transcriptional regulator N-terminus BM524_06010 PF12833 Helix-turn-helix domain BM524_06015 PF01336 OB-fold nucleic acid binding domain BM524_06015 PF00152 tRNA synthetases class II (D, K and N) BM524_06025 PF01699 Sodium/calcium exchanger protein BM524_06030 PF08443 RimK-like ATP-grasp domain BM524_06030 PF18030 RimK PreATP-grasp domain BM524_06050 PF00202 Aminotransferase class-III BM524_06055 PF04055 Radical SAM superfamily BM524_06055 PF06968 Biotin and Thiamin Synthesis associated domain BM524_06060 PF00155 Aminotransferase class I and II BM524_06065 PF08241 Methyltransferase domain BM524_06075 PF03575 Peptidase family S51 BM524_06080 PF01451 Low molecular weight phosphotyrosine protein phosphatase BM524_06085 PF01032 FecCD transport family BM524_06090 PF00005 ABC transporter BM524_06095 PF01474 Class-II DAHP synthetase family BM524_06110 PF00005 ABC transporter BM524_06110 PF00664 ABC transporter transmembrane region BM524_06115 PF06463 Molybdenum Cofactor Synthesis C BM524_06115 PF04055 Radical SAM superfamily BM524_06125 PF00486 Transcriptional regulatory protein, C terminal BM524_06125 PF00072 Response regulator receiver domain BM524_06145 PF00749 tRNA synthetases class I (E and Q), catalytic domain BM524_06180 PF01207 Dihydrouridine synthase (Dus) BM524_06195 PF13472 GDSL-like Lipase/Acylhydrolase family BM524_06200 PF00005 ABC transporter BM524_06210 PF08338 Domain of unknown function (DUF1731) BM524_06210 PF01370 NAD dependent epimerase/dehydratase family BM524_06215 PF02152 Dihydroneopterin aldolase BM524_06220 PF01594 AI-2E family transporter BM524_06225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_06225 PF08918 PhoQ Sensor BM524_06230 PF00072 Response regulator receiver domain BM524_06230 PF00486 Transcriptional regulatory protein, C terminal BM524_06245 PF03795 YCII-related domain BM524_06250 PF00290 Tryptophan synthase alpha chain BM524_06255 PF00291 Pyridoxal-phosphate dependent enzyme BM524_06260 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BM524_06260 PF00218 Indole-3-glycerol phosphate synthase BM524_06265 PF02885 Glycosyl transferase family, helical bundle domain BM524_06265 PF00591 Glycosyl transferase family, a/b domain BM524_06270 PF00117 Glutamine amidotransferase class-I BM524_06275 PF04715 Anthranilate synthase component I, N terminal region BM524_06275 PF00425 chorismate binding enzyme BM524_06280 PF02811 PHP domain BM524_06285 PF01300 Telomere recombination BM524_06290 PF02616 Segregation and condensation protein ScpA BM524_06295 PF04079 Segregation and condensation complex subunit ScpB BM524_06300 PF01479 S4 domain BM524_06300 PF00849 RNA pseudouridylate synthase BM524_06305 PF00248 Aldo/keto reductase family BM524_06310 PF12464 Maltose acetyltransferase BM524_06310 PF14602 Hexapeptide repeat of succinyl-transferase BM524_06320 PF04286 Protein of unknown function (DUF445) BM524_06335 PF00664 ABC transporter transmembrane region BM524_06335 PF00005 ABC transporter BM524_06340 PF00529 HlyD membrane-fusion protein of T1SS BM524_06340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM524_06345 PF05724 Thiopurine S-methyltransferase (TPMT) BM524_06350 PF04355 SmpA / OmlA family BM524_06355 PF02463 RecF/RecN/SMC N terminal domain BM524_06360 PF00210 Ferritin-like domain BM524_06370 PF00465 Iron-containing alcohol dehydrogenase BM524_06385 PF00561 alpha/beta hydrolase fold BM524_06395 PF00593 TonB dependent receptor BM524_06395 PF07715 TonB-dependent Receptor Plug Domain BM524_06400 PF00196 Bacterial regulatory proteins, luxR family BM524_06400 PF00072 Response regulator receiver domain BM524_06410 PF00072 Response regulator receiver domain BM524_06410 PF01627 Hpt domain BM524_06410 PF00512 His Kinase A (phospho-acceptor) domain BM524_06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_06410 PF00672 HAMP domain BM524_06430 PF01025 GrpE BM524_06435 PF00012 Hsp70 protein BM524_06440 PF00226 DnaJ domain BM524_06440 PF00684 DnaJ central domain BM524_06440 PF01556 DnaJ C terminal domain BM524_06445 PF01322 Cytochrome C' BM524_06455 PF16177 Acetyl-coenzyme A synthetase N-terminus BM524_06455 PF13193 AMP-binding enzyme C-terminal domain BM524_06455 PF00501 AMP-binding enzyme BM524_06465 PF05173 Dihydrodipicolinate reductase, C-terminus BM524_06465 PF01113 Dihydrodipicolinate reductase, N-terminus BM524_06470 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BM524_06470 PF00117 Glutamine amidotransferase class-I BM524_06475 PF02142 MGS-like domain BM524_06475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BM524_06475 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BM524_06480 PF01272 Transcription elongation factor, GreA/GreB, C-term BM524_06480 PF03449 Transcription elongation factor, N-terminal BM524_06495 PF00011 Hsp20/alpha crystallin family BM524_06500 PF00871 Acetokinase family BM524_06505 PF07085 DRTGG domain BM524_06505 PF01515 Phosphate acetyl/butaryl transferase BM524_06510 PF00795 Carbon-nitrogen hydrolase BM524_06515 PF00571 CBS domain BM524_06515 PF03471 Transporter associated domain BM524_06520 PF02130 Uncharacterized protein family UPF0054 BM524_06525 PF02562 PhoH-like protein BM524_06530 PF01938 TRAM domain BM524_06530 PF04055 Radical SAM superfamily BM524_06530 PF00919 Uncharacterized protein family UPF0004 BM524_06535 PF01494 FAD binding domain BM524_06560 PF07715 TonB-dependent Receptor Plug Domain BM524_06560 PF00593 TonB dependent receptor BM524_06565 PF03061 Thioesterase superfamily BM524_06570 PF01613 Flavin reductase like domain BM524_06580 PF01235 Sodium:alanine symporter family BM524_06625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BM524_06630 PF01926 50S ribosome-binding GTPase BM524_06630 PF06071 Protein of unknown function (DUF933) BM524_06635 PF01195 Peptidyl-tRNA hydrolase BM524_06640 PF14693 Ribosomal protein TL5, C-terminal domain BM524_06640 PF01386 Ribosomal L25p family BM524_06645 PF08240 Alcohol dehydrogenase GroES-like domain BM524_06645 PF00107 Zinc-binding dehydrogenase BM524_06660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BM524_06660 PF14572 Phosphoribosyl synthetase-associated domain BM524_06670 PF00288 GHMP kinases N terminal domain BM524_06670 PF08544 GHMP kinases C terminal BM524_06675 PF03550 Outer membrane lipoprotein LolB BM524_06680 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BM524_06680 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BM524_06680 PF01488 Shikimate / quinate 5-dehydrogenase BM524_06685 PF03462 PCRF domain BM524_06685 PF00472 RF-1 domain BM524_06690 PF17827 PrmC N-terminal domain BM524_06690 PF13847 Methyltransferase domain BM524_06695 PF11849 Domain of unknown function (DUF3369) BM524_06700 PF04247 Invasion gene expression up-regulator, SirB BM524_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_06715 PF03466 LysR substrate binding domain BM524_06725 PF04241 Protein of unknown function (DUF423) BM524_06730 PF01728 FtsJ-like methyltransferase BM524_06730 PF18125 RlmM ferredoxin-like domain BM524_06735 PF03144 Elongation factor Tu domain 2 BM524_06735 PF00009 Elongation factor Tu GTP binding domain BM524_06735 PF03764 Elongation factor G, domain IV BM524_06735 PF14492 Elongation Factor G, domain II BM524_06735 PF00679 Elongation factor G C-terminus BM524_06740 PF02560 Cyanate lyase C-terminal domain BM524_06745 PF00069 Protein kinase domain BM524_06750 PF01226 Formate/nitrite transporter BM524_06755 PF11992 Domain of unknown function (DUF3488) BM524_06755 PF01841 Transglutaminase-like superfamily BM524_06755 PF13559 Domain of unknown function (DUF4129) BM524_06765 PF07726 ATPase family associated with various cellular activities (AAA) BM524_06765 PF17863 AAA lid domain BM524_06770 PF17206 SeqA protein N-terminal domain BM524_06770 PF03925 SeqA protein C-terminal domain BM524_06775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM524_06775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM524_06775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM524_06775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM524_06780 PF00343 Carbohydrate phosphorylase BM524_06785 PF03707 Bacterial signalling protein N terminal repeat BM524_06785 PF00563 EAL domain BM524_06785 PF00990 Diguanylate cyclase, GGDEF domain BM524_06790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BM524_06800 PF01906 Putative heavy-metal-binding BM524_06805 PF00375 Sodium:dicarboxylate symporter family BM524_06820 PF07687 Peptidase dimerisation domain BM524_06820 PF01546 Peptidase family M20/M25/M40 BM524_06825 PF03960 ArsC family BM524_06830 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BM524_06845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM524_06850 PF04209 homogentisate 1,2-dioxygenase BM524_06880 PF00251 Glycosyl hydrolases family 32 N-terminal domain BM524_06880 PF08244 Glycosyl hydrolases family 32 C terminal BM524_06890 PF01306 LacY proton/sugar symporter BM524_06895 PF07715 TonB-dependent Receptor Plug Domain BM524_06895 PF00593 TonB dependent receptor BM524_06900 PF00091 Tubulin/FtsZ family, GTPase domain BM524_06900 PF12327 FtsZ family, C-terminal domain BM524_06930 PF01799 [2Fe-2S] binding domain BM524_06930 PF00111 2Fe-2S iron-sulfur cluster binding domain BM524_06940 PF00390 Malic enzyme, N-terminal domain BM524_06940 PF03949 Malic enzyme, NAD binding domain BM524_06945 PF03707 Bacterial signalling protein N terminal repeat BM524_06945 PF00990 Diguanylate cyclase, GGDEF domain BM524_06945 PF00563 EAL domain BM524_06950 PF00563 EAL domain BM524_06950 PF00990 Diguanylate cyclase, GGDEF domain BM524_06950 PF03707 Bacterial signalling protein N terminal repeat BM524_06955 PF00873 AcrB/AcrD/AcrF family BM524_06965 PF02254 TrkA-N domain BM524_06965 PF00999 Sodium/hydrogen exchanger family BM524_06970 PF02525 Flavodoxin-like fold BM524_06980 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM524_06985 PF01799 [2Fe-2S] binding domain BM524_06985 PF00111 2Fe-2S iron-sulfur cluster binding domain BM524_06990 PF01638 HxlR-like helix-turn-helix BM524_06995 PF13426 PAS domain BM524_06995 PF00990 Diguanylate cyclase, GGDEF domain BM524_06995 PF05231 MASE1 BM524_06995 PF08447 PAS fold BM524_06995 PF00563 EAL domain BM524_06995 PF08448 PAS fold BM524_07005 PF01979 Amidohydrolase family BM524_07010 PF00576 HIUase/Transthyretin family BM524_07025 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM524_07025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM524_07030 PF00111 2Fe-2S iron-sulfur cluster binding domain BM524_07030 PF01799 [2Fe-2S] binding domain BM524_07030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM524_07030 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM524_07040 PF08362 YcdC-like protein, C-terminal region BM524_07040 PF00440 Bacterial regulatory proteins, tetR family BM524_07055 PF00860 Permease family BM524_07060 PF00962 Adenosine/AMP deaminase BM524_07070 PF00563 EAL domain BM524_07070 PF00990 Diguanylate cyclase, GGDEF domain BM524_07070 PF03707 Bacterial signalling protein N terminal repeat BM524_07075 PF00563 EAL domain BM524_07075 PF01590 GAF domain BM524_07075 PF00990 Diguanylate cyclase, GGDEF domain BM524_07075 PF00360 Phytochrome region BM524_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_07080 PF00072 Response regulator receiver domain BM524_07080 PF09308 LuxQ, periplasmic BM524_07080 PF00512 His Kinase A (phospho-acceptor) domain BM524_07090 PF00593 TonB dependent receptor BM524_07090 PF07715 TonB-dependent Receptor Plug Domain BM524_07095 PF00860 Permease family BM524_07105 PF01546 Peptidase family M20/M25/M40 BM524_07105 PF07687 Peptidase dimerisation domain BM524_07110 PF00266 Aminotransferase class-V BM524_07115 PF01925 Sulfite exporter TauE/SafE BM524_07125 PF01425 Amidase BM524_07165 PF03129 Anticodon binding domain BM524_07165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BM524_07165 PF02824 TGS domain BM524_07165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BM524_07170 PF00707 Translation initiation factor IF-3, C-terminal domain BM524_07170 PF05198 Translation initiation factor IF-3, N-terminal domain BM524_07175 PF01632 Ribosomal protein L35 BM524_07180 PF00453 Ribosomal protein L20 BM524_07185 PF00483 Nucleotidyl transferase BM524_07185 PF01050 Mannose-6-phosphate isomerase BM524_07190 PF02397 Bacterial sugar transferase BM524_07200 PF10531 SLBB domain BM524_07200 PF02563 Polysaccharide biosynthesis/export protein BM524_07200 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BM524_07205 PF13614 AAA domain BM524_07235 PF03707 Bacterial signalling protein N terminal repeat BM524_07235 PF00563 EAL domain BM524_07235 PF00990 Diguanylate cyclase, GGDEF domain BM524_07260 PF00535 Glycosyl transferase family 2 BM524_07280 PF00535 Glycosyl transferase family 2 BM524_07285 PF00534 Glycosyl transferases group 1 BM524_07285 PF13439 Glycosyltransferase Family 4 BM524_07295 PF03808 Glycosyl transferase WecB/TagA/CpsF family BM524_07310 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BM524_07310 PF01409 tRNA synthetases class II core domain (F) BM524_07315 PF03483 B3/4 domain BM524_07315 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BM524_07315 PF03484 tRNA synthetase B5 domain BM524_07315 PF03147 Ferredoxin-fold anticodon binding domain BM524_07315 PF01588 Putative tRNA binding domain BM524_07320 PF00216 Bacterial DNA-binding protein BM524_07340 PF04073 Aminoacyl-tRNA editing domain BM524_07345 PF01804 Penicillin amidase BM524_07350 PF00933 Glycosyl hydrolase family 3 N terminal domain BM524_07355 PF01923 Cobalamin adenosyltransferase BM524_07365 PF03461 TRCF domain BM524_07365 PF00270 DEAD/DEAH box helicase BM524_07365 PF02559 CarD-like/TRCF domain BM524_07365 PF17757 UvrB interaction domain BM524_07365 PF00271 Helicase conserved C-terminal domain BM524_07375 PF02687 FtsX-like permease family BM524_07375 PF12704 MacB-like periplasmic core domain BM524_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_07385 PF08448 PAS fold BM524_07385 PF13188 PAS domain BM524_07385 PF00072 Response regulator receiver domain BM524_07385 PF00512 His Kinase A (phospho-acceptor) domain BM524_07400 PF03372 Endonuclease/Exonuclease/phosphatase family BM524_07435 PF07690 Major Facilitator Superfamily BM524_07445 PF00483 Nucleotidyl transferase BM524_07465 PF00682 HMGL-like BM524_07470 PF02785 Biotin carboxylase C-terminal domain BM524_07470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BM524_07470 PF00364 Biotin-requiring enzyme BM524_07470 PF00289 Biotin carboxylase, N-terminal domain BM524_07475 PF00378 Enoyl-CoA hydratase/isomerase BM524_07480 PF01039 Carboxyl transferase domain BM524_07485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM524_07485 PF02770 Acyl-CoA dehydrogenase, middle domain BM524_07485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM524_07490 PF13411 MerR HTH family regulatory protein BM524_07495 PF02803 Thiolase, C-terminal domain BM524_07495 PF00108 Thiolase, N-terminal domain BM524_07505 PF00266 Aminotransferase class-V BM524_07510 PF17151 Periplasmic sensor domain BM524_07510 PF00990 Diguanylate cyclase, GGDEF domain BM524_07520 PF00929 Exonuclease BM524_07520 PF08411 Exonuclease C-terminal BM524_07525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM524_07525 PF00072 Response regulator receiver domain BM524_07525 PF00512 His Kinase A (phospho-acceptor) domain BM524_07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_07525 PF00672 HAMP domain BM524_07525 PF01627 Hpt domain BM524_07530 PF01112 Asparaginase BM524_07540 PF02333 Phytase BM524_07570 PF00271 Helicase conserved C-terminal domain BM524_07570 PF11898 Domain of unknown function (DUF3418) BM524_07570 PF04408 Helicase associated domain (HA2) BM524_07570 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BM524_07570 PF00270 DEAD/DEAH box helicase BM524_07585 PF10672 S-adenosylmethionine-dependent methyltransferase BM524_07585 PF17785 PUA-like domain BM524_07590 PF02801 Beta-ketoacyl synthase, C-terminal domain BM524_07590 PF16197 Ketoacyl-synthetase C-terminal extension BM524_07590 PF08240 Alcohol dehydrogenase GroES-like domain BM524_07590 PF00109 Beta-ketoacyl synthase, N-terminal domain BM524_07590 PF08659 KR domain BM524_07590 PF00698 Acyl transferase domain BM524_07590 PF14765 Polyketide synthase dehydratase BM524_07590 PF00550 Phosphopantetheine attachment site BM524_07595 PF00075 RNase H BM524_07600 PF00929 Exonuclease BM524_07630 PF12792 CSS motif domain associated with EAL BM524_07630 PF00563 EAL domain BM524_07635 PF00005 ABC transporter BM524_07640 PF02687 FtsX-like permease family BM524_07640 PF12704 MacB-like periplasmic core domain BM524_07645 PF00375 Sodium:dicarboxylate symporter family BM524_07655 PF04996 Succinylarginine dihydrolase BM524_07665 PF01751 Toprim domain BM524_07665 PF01131 DNA topoisomerase BM524_07665 PF08272 Topoisomerase I zinc-ribbon-like BM524_07665 PF01396 Topoisomerase DNA binding C4 zinc finger BM524_07680 PF12804 MobA-like NTP transferase domain BM524_07685 PF02634 FdhD/NarQ family BM524_07690 PF00384 Molybdopterin oxidoreductase BM524_07695 PF13673 Acetyltransferase (GNAT) domain BM524_07700 PF13419 Haloacid dehalogenase-like hydrolase BM524_07710 PF00575 S1 RNA binding domain BM524_07710 PF10150 Ribonuclease E/G family BM524_07710 PF12111 Polyribonucleotide phosphorylase C terminal BM524_07715 PF01479 S4 domain BM524_07715 PF00849 RNA pseudouridylate synthase BM524_07720 PF13419 Haloacid dehalogenase-like hydrolase BM524_07725 PF02545 Maf-like protein BM524_07730 PF02620 Large ribosomal RNA subunit accumulation protein YceD BM524_07735 PF01783 Ribosomal L32p protein family BM524_07740 PF02504 Fatty acid synthesis protein BM524_07745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BM524_07745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BM524_07750 PF00698 Acyl transferase domain BM524_07760 PF00550 Phosphopantetheine attachment site BM524_07765 PF02801 Beta-ketoacyl synthase, C-terminal domain BM524_07765 PF00109 Beta-ketoacyl synthase, N-terminal domain BM524_07770 PF01063 Amino-transferase class IV BM524_07775 PF02618 YceG-like family BM524_07780 PF02223 Thymidylate kinase BM524_07785 PF09115 DNA polymerase III, delta subunit, C terminal BM524_07790 PF01026 TatD related DNase BM524_07800 PF13460 NAD(P)H-binding BM524_07805 PF00072 Response regulator receiver domain BM524_07805 PF00990 Diguanylate cyclase, GGDEF domain BM524_07830 PF00561 alpha/beta hydrolase fold BM524_07835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM524_07835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM524_07835 PF00378 Enoyl-CoA hydratase/isomerase BM524_07840 PF00108 Thiolase, N-terminal domain BM524_07840 PF02803 Thiolase, C-terminal domain BM524_07845 PF02770 Acyl-CoA dehydrogenase, middle domain BM524_07845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM524_07845 PF12806 Acetyl-CoA dehydrogenase C-terminal like BM524_07845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM524_07860 PF04198 Putative sugar-binding domain BM524_07865 PF13419 Haloacid dehalogenase-like hydrolase BM524_07875 PF01232 Mannitol dehydrogenase Rossmann domain BM524_07875 PF08125 Mannitol dehydrogenase C-terminal domain BM524_07885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_07885 PF03466 LysR substrate binding domain BM524_07890 PF01575 MaoC like domain BM524_07900 PF00924 Mechanosensitive ion channel BM524_07905 PF07715 TonB-dependent Receptor Plug Domain BM524_07905 PF00593 TonB dependent receptor BM524_07910 PF01329 Pterin 4 alpha carbinolamine dehydratase BM524_07930 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM524_07930 PF00072 Response regulator receiver domain BM524_07930 PF00512 His Kinase A (phospho-acceptor) domain BM524_07930 PF00989 PAS fold BM524_07930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_07930 PF01627 Hpt domain BM524_07935 PF00072 Response regulator receiver domain BM524_07940 PF17384 RimP C-terminal SH3 domain BM524_07940 PF02576 RimP N-terminal domain BM524_07945 PF08529 NusA N-terminal domain BM524_07945 PF13184 NusA-like KH domain BM524_07945 PF00575 S1 RNA binding domain BM524_07950 PF11987 Translation-initiation factor 2 BM524_07950 PF08364 Bacterial translation initiation factor IF-2 associated region BM524_07950 PF00009 Elongation factor Tu GTP binding domain BM524_07950 PF04760 Translation initiation factor IF-2, N-terminal region BM524_07955 PF02033 Ribosome-binding factor A BM524_07960 PF09157 Pseudouridine synthase II TruB, C-terminal BM524_07960 PF16198 tRNA pseudouridylate synthase B C-terminal domain BM524_07960 PF01509 TruB family pseudouridylate synthase (N terminal domain) BM524_07970 PF00312 Ribosomal protein S15 BM524_07975 PF00563 EAL domain BM524_07975 PF00990 Diguanylate cyclase, GGDEF domain BM524_07975 PF03707 Bacterial signalling protein N terminal repeat BM524_07980 PF01479 S4 domain BM524_07980 PF00849 RNA pseudouridylate synthase BM524_07990 PF00795 Carbon-nitrogen hydrolase BM524_07990 PF00583 Acetyltransferase (GNAT) family BM524_08020 PF10417 C-terminal domain of 1-Cys peroxiredoxin BM524_08020 PF00578 AhpC/TSA family BM524_08025 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_08025 PF13192 Thioredoxin domain BM524_08065 PF11842 Domain of unknown function (DUF3362) BM524_08065 PF08497 Radical SAM N-terminal BM524_08065 PF04055 Radical SAM superfamily BM524_08080 PF00593 TonB dependent receptor BM524_08080 PF07715 TonB-dependent Receptor Plug Domain BM524_08085 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_08085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM524_08095 PF13416 Bacterial extracellular solute-binding protein BM524_08105 PF00005 ABC transporter BM524_08110 PF01066 CDP-alcohol phosphatidyltransferase BM524_08130 PF00563 EAL domain BM524_08130 PF00360 Phytochrome region BM524_08130 PF01590 GAF domain BM524_08130 PF00990 Diguanylate cyclase, GGDEF domain BM524_08150 PF03466 LysR substrate binding domain BM524_08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_08170 PF00005 ABC transporter BM524_08180 PF00106 short chain dehydrogenase BM524_08185 PF01370 NAD dependent epimerase/dehydratase family BM524_08190 PF01758 Sodium Bile acid symporter family BM524_08215 PF05930 Prophage CP4-57 regulatory protein (AlpA) BM524_08230 PF02796 Helix-turn-helix domain of resolvase BM524_08230 PF00239 Resolvase, N terminal domain BM524_08245 PF00589 Phage integrase family BM524_08245 PF13356 Arm DNA-binding domain BM524_08255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM524_08260 PF01668 SmpB protein BM524_08265 PF03364 Polyketide cyclase / dehydrase and lipid transport BM524_08270 PF03658 RnfH family Ubiquitin BM524_08280 PF02028 BCCT, betaine/carnitine/choline family transporter BM524_08285 PF07715 TonB-dependent Receptor Plug Domain BM524_08285 PF00593 TonB dependent receptor BM524_08290 PF13181 Tetratricopeptide repeat BM524_08300 PF03618 Kinase/pyrophosphorylase BM524_08305 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BM524_08305 PF02896 PEP-utilising enzyme, TIM barrel domain BM524_08305 PF00391 PEP-utilising enzyme, mobile domain BM524_08315 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM524_08320 PF00111 2Fe-2S iron-sulfur cluster binding domain BM524_08320 PF01799 [2Fe-2S] binding domain BM524_08340 PF08007 Cupin superfamily protein BM524_08350 PF00211 Adenylate and Guanylate cyclase catalytic domain BM524_08355 PF08328 Adenylosuccinate lyase C-terminal BM524_08355 PF00206 Lyase BM524_08360 PF04356 Protein of unknown function (DUF489) BM524_08370 PF00849 RNA pseudouridylate synthase BM524_08375 PF03971 Monomeric isocitrate dehydrogenase BM524_08380 PF00313 'Cold-shock' DNA-binding domain BM524_08385 PF02617 ATP-dependent Clp protease adaptor protein ClpS BM524_08390 PF07724 AAA domain (Cdc48 subfamily) BM524_08390 PF17871 AAA lid domain BM524_08390 PF10431 C-terminal, D2-small domain, of ClpB protein BM524_08390 PF00004 ATPase family associated with various cellular activities (AAA) BM524_08390 PF02861 Clp amino terminal domain, pathogenicity island component BM524_08395 PF01176 Translation initiation factor 1A / IF-1 BM524_08400 PF04376 Arginine-tRNA-protein transferase, N terminus BM524_08400 PF04377 Arginine-tRNA-protein transferase, C terminus BM524_08405 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BM524_08410 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_08415 PF04217 Protein of unknown function, DUF412 BM524_08420 PF10263 SprT-like family BM524_08425 PF01343 Peptidase family S49 BM524_08440 PF00881 Nitroreductase family BM524_08450 PF00710 Asparaginase, N-terminal BM524_08450 PF17763 Glutaminase/Asparaginase C-terminal domain BM524_08455 PF04055 Radical SAM superfamily BM524_08455 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BM524_08460 PF03099 Biotin/lipoate A/B protein ligase family BM524_08465 PF04359 Protein of unknown function (DUF493) BM524_08470 PF00768 D-alanyl-D-alanine carboxypeptidase BM524_08470 PF07943 Penicillin-binding protein 5, C-terminal domain BM524_08475 PF03330 Lytic transglycolase BM524_08475 PF05036 Sporulation related domain BM524_08480 PF01098 Cell cycle protein BM524_08485 PF00905 Penicillin binding protein transpeptidase domain BM524_08485 PF03717 Penicillin-binding Protein dimerisation domain BM524_08490 PF02590 Predicted SPOUT methyltransferase BM524_08500 PF01467 Cytidylyltransferase-like BM524_08505 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BM524_08505 PF06144 DNA polymerase III, delta subunit BM524_08510 PF04390 Lipopolysaccharide-assembly BM524_08515 PF08264 Anticodon-binding domain of tRNA BM524_08515 PF00133 tRNA synthetases class I (I, L, M and V) BM524_08515 PF13603 Leucyl-tRNA synthetase, Domain 2 BM524_08525 PF05362 Lon protease (S16) C-terminal proteolytic domain BM524_08525 PF13654 AAA domain BM524_08530 PF12697 Alpha/beta hydrolase family BM524_08535 PF00990 Diguanylate cyclase, GGDEF domain BM524_08540 PF00106 short chain dehydrogenase BM524_08545 PF01985 CRS1 / YhbY (CRM) domain BM524_08550 PF01728 FtsJ-like methyltransferase BM524_08555 PF17862 AAA+ lid domain BM524_08555 PF06480 FtsH Extracellular BM524_08555 PF01434 Peptidase family M41 BM524_08555 PF00004 ATPase family associated with various cellular activities (AAA) BM524_08560 PF00809 Pterin binding enzyme BM524_08565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM524_08565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM524_08565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM524_08565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM524_08570 PF00121 Triosephosphate isomerase BM524_08575 PF03840 Preprotein translocase SecG subunit BM524_08585 PF03707 Bacterial signalling protein N terminal repeat BM524_08585 PF00563 EAL domain BM524_08585 PF00990 Diguanylate cyclase, GGDEF domain BM524_08590 PF01679 Proteolipid membrane potential modulator BM524_08600 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM524_08600 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BM524_08605 PF02142 MGS-like domain BM524_08605 PF00781 Diacylglycerol kinase catalytic domain BM524_08635 PF00474 Sodium:solute symporter family BM524_08660 PF03725 3' exoribonuclease family, domain 2 BM524_08660 PF01138 3' exoribonuclease family, domain 1 BM524_08660 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BM524_08660 PF00575 S1 RNA binding domain BM524_08660 PF00013 KH domain BM524_08705 PF02567 Phenazine biosynthesis-like protein BM524_08790 PF03544 Gram-negative bacterial TonB protein C-terminal BM524_08810 PF13181 Tetratricopeptide repeat BM524_08810 PF07719 Tetratricopeptide repeat BM524_08825 PF06470 SMC proteins Flexible Hinge Domain BM524_08825 PF02463 RecF/RecN/SMC N terminal domain BM524_08830 PF04354 ZipA, C-terminal FtsZ-binding domain BM524_08835 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BM524_08835 PF12826 Helix-hairpin-helix motif BM524_08835 PF01653 NAD-dependent DNA ligase adenylation domain BM524_08835 PF00533 BRCA1 C Terminus (BRCT) domain BM524_08835 PF03120 NAD-dependent DNA ligase OB-fold domain BM524_08850 PF00664 ABC transporter transmembrane region BM524_08850 PF00005 ABC transporter BM524_08855 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BM524_08860 PF03966 Trm112p-like protein BM524_08865 PF02348 Cytidylyltransferase BM524_08880 PF00919 Uncharacterized protein family UPF0004 BM524_08880 PF04055 Radical SAM superfamily BM524_08880 PF18693 TRAM domain BM524_08895 PF00899 ThiF family BM524_08900 PF13409 Glutathione S-transferase, N-terminal domain BM524_08905 PF05726 Pirin C-terminal cupin domain BM524_08905 PF02678 Pirin BM524_08910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM524_08910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM524_08910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM524_08910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM524_08920 PF00285 Citrate synthase, C-terminal domain BM524_08925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BM524_08930 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BM524_08935 PF02910 Fumarate reductase flavoprotein C-term BM524_08935 PF00890 FAD binding domain BM524_08940 PF13085 2Fe-2S iron-sulfur cluster binding domain BM524_08945 PF00676 Dehydrogenase E1 component BM524_08945 PF16870 2-oxoglutarate dehydrogenase C-terminal BM524_08945 PF02779 Transketolase, pyrimidine binding domain BM524_08945 PF16078 2-oxoglutarate dehydrogenase N-terminus BM524_08950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BM524_08950 PF02817 e3 binding domain BM524_08950 PF00364 Biotin-requiring enzyme BM524_08955 PF08442 ATP-grasp domain BM524_08955 PF00549 CoA-ligase BM524_08960 PF02629 CoA binding domain BM524_08960 PF00549 CoA-ligase BM524_08975 PF04820 Tryptophan halogenase BM524_08985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BM524_08985 PF11852 Domain of unknown function (DUF3372) BM524_08985 PF17967 Pullulanase N2 domain BM524_08985 PF03714 Bacterial pullanase-associated domain BM524_08985 PF18494 Pullulanase Ins domain BM524_08990 PF01734 Patatin-like phospholipase BM524_09005 PF02903 Alpha amylase, N-terminal ig-like domain BM524_09005 PF16657 Maltogenic Amylase, C-terminal domain BM524_09005 PF00128 Alpha amylase, catalytic domain BM524_09010 PF09087 Cyclomaltodextrinase, N-terminal BM524_09010 PF10438 Cyclo-malto-dextrinase C-terminal domain BM524_09010 PF00128 Alpha amylase, catalytic domain BM524_09020 PF02806 Alpha amylase, C-terminal all-beta domain BM524_09020 PF01833 IPT/TIG domain BM524_09020 PF00686 Starch binding domain BM524_09020 PF00128 Alpha amylase, catalytic domain BM524_09025 PF00356 Bacterial regulatory proteins, lacI family BM524_09030 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BM524_09030 PF00749 tRNA synthetases class I (E and Q), catalytic domain BM524_09035 PF00106 short chain dehydrogenase BM524_09040 PF12262 Bacterial virulence factor lipase N-terminal BM524_09045 PF01804 Penicillin amidase BM524_09050 PF01343 Peptidase family S49 BM524_09050 PF08496 Peptidase family S49 N-terminal BM524_09065 PF01784 NIF3 (NGG1p interacting factor 3) BM524_09075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM524_09075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM524_09080 PF00255 Glutathione peroxidase BM524_09085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BM524_09085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM524_09095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM524_09095 PF02770 Acyl-CoA dehydrogenase, middle domain BM524_09095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM524_09100 PF00378 Enoyl-CoA hydratase/isomerase BM524_09105 PF13847 Methyltransferase domain BM524_09115 PF11893 Domain of unknown function (DUF3413) BM524_09115 PF00884 Sulfatase BM524_09120 PF07208 Protein of unknown function (DUF1414) BM524_09125 PF04245 37-kD nucleoid-associated bacterial protein BM524_09155 PF06580 Histidine kinase BM524_09155 PF07694 5TMR of 5TMR-LYT BM524_09160 PF00072 Response regulator receiver domain BM524_09160 PF04397 LytTr DNA-binding domain BM524_09165 PF00365 Phosphofructokinase BM524_09175 PF13411 MerR HTH family regulatory protein BM524_09190 PF16916 Dimerisation domain of Zinc Transporter BM524_09190 PF01545 Cation efflux family BM524_09210 PF00873 AcrB/AcrD/AcrF family BM524_09225 PF00486 Transcriptional regulatory protein, C terminal BM524_09225 PF00072 Response regulator receiver domain BM524_09245 PF00271 Helicase conserved C-terminal domain BM524_09245 PF00270 DEAD/DEAH box helicase BM524_09250 PF01144 Coenzyme A transferase BM524_09255 PF01144 Coenzyme A transferase BM524_09260 PF03466 LysR substrate binding domain BM524_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_09275 PF03466 LysR substrate binding domain BM524_09280 PF03313 Serine dehydratase alpha chain BM524_09280 PF03315 Serine dehydratase beta chain BM524_09285 PF00293 NUDIX domain BM524_09290 PF00425 chorismate binding enzyme BM524_09290 PF04715 Anthranilate synthase component I, N terminal region BM524_09305 PF02646 RmuC family BM524_09310 PF13860 FlgD Ig-like domain BM524_09310 PF05922 Peptidase inhibitor I9 BM524_09310 PF00082 Subtilase family BM524_09310 PF02225 PA domain BM524_09315 PF00676 Dehydrogenase E1 component BM524_09320 PF02779 Transketolase, pyrimidine binding domain BM524_09320 PF02780 Transketolase, C-terminal domain BM524_09325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BM524_09325 PF02817 e3 binding domain BM524_09325 PF00364 Biotin-requiring enzyme BM524_09330 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BM524_09335 PF00069 Protein kinase domain BM524_09345 PF00132 Bacterial transferase hexapeptide (six repeats) BM524_09350 PF00266 Aminotransferase class-V BM524_09360 PF13185 GAF domain BM524_09370 PF04352 ProQ/FINO family BM524_09370 PF17516 ProQ C-terminal domain BM524_09375 PF03572 Peptidase family S41 BM524_09375 PF17804 Tail specific protease N-terminal domain BM524_09375 PF11818 C-terminal domain of tail specific protease (DUF3340) BM524_09375 PF00595 PDZ domain BM524_09380 PF00209 Sodium:neurotransmitter symporter family BM524_09390 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BM524_09390 PF01433 Peptidase family M1 domain BM524_09390 PF11940 Domain of unknown function (DUF3458) Ig-like fold BM524_09405 PF07044 Protein of unknown function (DUF1329) BM524_09420 PF05088 Bacterial NAD-glutamate dehydrogenase BM524_09425 PF01180 Dihydroorotate dehydrogenase BM524_09430 PF10672 S-adenosylmethionine-dependent methyltransferase BM524_09430 PF01170 Putative RNA methylase family UPF0020 BM524_09430 PF02926 THUMP domain BM524_09450 PF04957 Ribosome modulation factor BM524_09455 PF07977 FabA-like domain BM524_09465 PF03441 FAD binding domain of DNA photolyase BM524_09465 PF00875 DNA photolyase BM524_09470 PF03441 FAD binding domain of DNA photolyase BM524_09470 PF00875 DNA photolyase BM524_09475 PF00875 DNA photolyase BM524_09475 PF03441 FAD binding domain of DNA photolyase BM524_09480 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BM524_09490 PF06276 Ferric iron reductase FhuF-like transporter BM524_09490 PF04183 IucA / IucC family BM524_09495 PF04183 IucA / IucC family BM524_09495 PF06276 Ferric iron reductase FhuF-like transporter BM524_09500 PF13193 AMP-binding enzyme C-terminal domain BM524_09500 PF00501 AMP-binding enzyme BM524_09505 PF00550 Phosphopantetheine attachment site BM524_09510 PF01261 Xylose isomerase-like TIM barrel BM524_09540 PF00589 Phage integrase family BM524_09540 PF02899 Phage integrase, N-terminal SAM-like domain BM524_09550 PF01219 Prokaryotic diacylglycerol kinase BM524_09555 PF00582 Universal stress protein family BM524_09565 PF01645 Conserved region in glutamate synthase BM524_09570 PF00999 Sodium/hydrogen exchanger family BM524_09575 PF00210 Ferritin-like domain BM524_09580 PF00210 Ferritin-like domain BM524_09590 PF00115 Cytochrome C and Quinol oxidase polypeptide I BM524_09605 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BM524_09605 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BM524_09615 PF00403 Heavy-metal-associated domain BM524_09630 PF00027 Cyclic nucleotide-binding domain BM524_09630 PF13545 Crp-like helix-turn-helix domain BM524_09635 PF00582 Universal stress protein family BM524_09640 PF01171 PP-loop family BM524_09645 PF01734 Patatin-like phospholipase BM524_09665 PF01810 LysE type translocator BM524_09670 PF02146 Sir2 family BM524_09675 PF00581 Rhodanese-like domain BM524_09680 PF08534 Redoxin BM524_09705 PF01066 CDP-alcohol phosphatidyltransferase BM524_09710 PF02151 UvrB/uvrC motif BM524_09710 PF01541 GIY-YIG catalytic domain BM524_09710 PF08459 UvrC Helix-hairpin-helix N-terminal BM524_09715 PF00072 Response regulator receiver domain BM524_09715 PF00196 Bacterial regulatory proteins, luxR family BM524_09720 PF00155 Aminotransferase class I and II BM524_09725 PF12867 DinB superfamily BM524_09725 PF03781 Sulfatase-modifying factor enzyme 1 BM524_09740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_09740 PF03466 LysR substrate binding domain BM524_09745 PF07681 DoxX BM524_09755 PF01027 Inhibitor of apoptosis-promoting Bax1 BM524_09760 PF02635 DsrE/DsrF-like family BM524_09775 PF04358 DsrC like protein BM524_09805 PF00593 TonB dependent receptor BM524_09805 PF07715 TonB-dependent Receptor Plug Domain BM524_09805 PF00593 TonB dependent receptor BM524_09805 PF07715 TonB-dependent Receptor Plug Domain BM524_09810 PF02403 Seryl-tRNA synthetase N-terminal domain BM524_09810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BM524_09815 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BM524_09820 PF00004 ATPase family associated with various cellular activities (AAA) BM524_09820 PF16193 AAA C-terminal domain BM524_09820 PF12002 MgsA AAA+ ATPase C terminal BM524_09830 PF17854 FtsK alpha domain BM524_09830 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BM524_09830 PF09397 Ftsk gamma domain BM524_09830 PF01580 FtsK/SpoIIIE family BM524_09835 PF01037 Lrp/AsnC ligand binding domain BM524_09840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BM524_09840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BM524_09845 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BM524_09850 PF18073 Rubredoxin metal binding domain BM524_09865 PF00216 Bacterial DNA-binding protein BM524_09870 PF00575 S1 RNA binding domain BM524_09875 PF02224 Cytidylate kinase BM524_09880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BM524_09885 PF00266 Aminotransferase class-V BM524_09890 PF00521 DNA gyrase/topoisomerase IV, subunit A BM524_09890 PF03989 DNA gyrase C-terminal domain, beta-propeller BM524_09900 PF00317 Ribonucleotide reductase, all-alpha domain BM524_09900 PF03477 ATP cone domain BM524_09900 PF02867 Ribonucleotide reductase, barrel domain BM524_09905 PF00268 Ribonucleotide reductase, small chain BM524_09910 PF00111 2Fe-2S iron-sulfur cluster binding domain BM524_09925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM524_09925 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_09930 PF00563 EAL domain BM524_09930 PF00990 Diguanylate cyclase, GGDEF domain BM524_09930 PF03707 Bacterial signalling protein N terminal repeat BM524_09935 PF00892 EamA-like transporter family BM524_09940 PF01259 SAICAR synthetase BM524_09945 PF06804 NlpB/DapX lipoprotein BM524_09950 PF00701 Dihydrodipicolinate synthetase family BM524_09960 PF00578 AhpC/TSA family BM524_09965 PF01594 AI-2E family transporter BM524_09970 PF01435 Peptidase family M48 BM524_09980 PF03960 ArsC family BM524_09985 PF03358 NADPH-dependent FMN reductase BM524_09995 PF00308 Bacterial dnaA protein BM524_10005 PF02769 AIR synthase related protein, C-terminal domain BM524_10005 PF00586 AIR synthase related protein, N-terminal domain BM524_10010 PF00551 Formyl transferase BM524_10020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM524_10020 PF02770 Acyl-CoA dehydrogenase, middle domain BM524_10020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM524_10020 PF09317 Domain of unknown function (DUF1974) BM524_10030 PF00072 Response regulator receiver domain BM524_10030 PF00196 Bacterial regulatory proteins, luxR family BM524_10035 PF13649 Methyltransferase domain BM524_10040 PF08003 Protein of unknown function (DUF1698) BM524_10045 PF00485 Phosphoribulokinase / Uridine kinase family BM524_10060 PF00128 Alpha amylase, catalytic domain BM524_10065 PF13419 Haloacid dehalogenase-like hydrolase BM524_10070 PF00994 Probable molybdopterin binding domain BM524_10070 PF03453 MoeA N-terminal region (domain I and II) BM524_10070 PF03454 MoeA C-terminal region (domain IV) BM524_10075 PF01554 MatE BM524_10090 PF01434 Peptidase family M41 BM524_10090 PF17862 AAA+ lid domain BM524_10090 PF00004 ATPase family associated with various cellular activities (AAA) BM524_10095 PF00291 Pyridoxal-phosphate dependent enzyme BM524_10150 PF02567 Phenazine biosynthesis-like protein BM524_10160 PF00378 Enoyl-CoA hydratase/isomerase BM524_10175 PF00255 Glutathione peroxidase BM524_10180 PF02525 Flavodoxin-like fold BM524_10190 PF01053 Cys/Met metabolism PLP-dependent enzyme BM524_10205 PF00155 Aminotransferase class I and II BM524_10210 PF10459 Peptidase S46 BM524_10220 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BM524_10235 PF02770 Acyl-CoA dehydrogenase, middle domain BM524_10235 PF12806 Acetyl-CoA dehydrogenase C-terminal like BM524_10235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM524_10235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM524_10240 PF07883 Cupin domain BM524_10240 PF12833 Helix-turn-helix domain BM524_10245 PF07715 TonB-dependent Receptor Plug Domain BM524_10245 PF00593 TonB dependent receptor BM524_10255 PF00326 Prolyl oligopeptidase family BM524_10255 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BM524_10260 PF00873 AcrB/AcrD/AcrF family BM524_10265 PF13533 Biotin-lipoyl like BM524_10275 PF01012 Electron transfer flavoprotein domain BM524_10275 PF00766 Electron transfer flavoprotein FAD-binding domain BM524_10280 PF01012 Electron transfer flavoprotein domain BM524_10290 PF00816 H-NS histone family BM524_10295 PF00561 alpha/beta hydrolase fold BM524_10305 PF00258 Flavodoxin BM524_10310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_10310 PF00672 HAMP domain BM524_10315 PF01475 Ferric uptake regulator family BM524_10320 PF01063 Amino-transferase class IV BM524_10325 PF02626 Carboxyltransferase domain, subdomain A and B BM524_10330 PF02682 Carboxyltransferase domain, subdomain C and D BM524_10335 PF03746 LamB/YcsF family BM524_10340 PF13509 S1 domain BM524_10340 PF17783 CvfB-like winged helix domain BM524_10345 PF02566 OsmC-like protein BM524_10350 PF13533 Biotin-lipoyl like BM524_10355 PF00873 AcrB/AcrD/AcrF family BM524_10360 PF00873 AcrB/AcrD/AcrF family BM524_10375 PF00155 Aminotransferase class I and II BM524_10385 PF13286 Phosphohydrolase-associated domain BM524_10385 PF01966 HD domain BM524_10390 PF00174 Oxidoreductase molybdopterin binding domain BM524_10395 PF01794 Ferric reductase like transmembrane component BM524_10410 PF02810 SEC-C motif BM524_10415 PF05231 MASE1 BM524_10415 PF08448 PAS fold BM524_10415 PF08447 PAS fold BM524_10415 PF00990 Diguanylate cyclase, GGDEF domain BM524_10415 PF13426 PAS domain BM524_10415 PF00563 EAL domain BM524_10420 PF00128 Alpha amylase, catalytic domain BM524_10430 PF08240 Alcohol dehydrogenase GroES-like domain BM524_10430 PF00107 Zinc-binding dehydrogenase BM524_10440 PF02770 Acyl-CoA dehydrogenase, middle domain BM524_10440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM524_10440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM524_10450 PF07715 TonB-dependent Receptor Plug Domain BM524_10450 PF00593 TonB dependent receptor BM524_10470 PF06969 HemN C-terminal domain BM524_10470 PF04055 Radical SAM superfamily BM524_10475 PF03459 TOBE domain BM524_10475 PF00005 ABC transporter BM524_10480 PF00528 Binding-protein-dependent transport system inner membrane component BM524_10490 PF02391 MoaE protein BM524_10495 PF02597 ThiS family BM524_10500 PF01967 MoaC family BM524_10505 PF00994 Probable molybdopterin binding domain BM524_10510 PF00899 ThiF family BM524_10520 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BM524_10525 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BM524_10540 PF00155 Aminotransferase class I and II BM524_10545 PF03435 Saccharopine dehydrogenase NADP binding domain BM524_10550 PF00155 Aminotransferase class I and II BM524_10565 PF08267 Cobalamin-independent synthase, N-terminal domain BM524_10565 PF01717 Cobalamin-independent synthase, Catalytic domain BM524_10570 PF07715 TonB-dependent Receptor Plug Domain BM524_10570 PF00593 TonB dependent receptor BM524_10580 PF00892 EamA-like transporter family BM524_10590 PF02245 Methylpurine-DNA glycosylase (MPG) BM524_10605 PF13538 UvrD-like helicase C-terminal domain BM524_10610 PF12705 PD-(D/E)XK nuclease superfamily BM524_10610 PF00580 UvrD/REP helicase N-terminal domain BM524_10610 PF13361 UvrD-like helicase C-terminal domain BM524_10615 PF17946 RecC C-terminal domain BM524_10625 PF00501 AMP-binding enzyme BM524_10630 PF08447 PAS fold BM524_10630 PF00990 Diguanylate cyclase, GGDEF domain BM524_10630 PF08448 PAS fold BM524_10630 PF00563 EAL domain BM524_10635 PF12706 Beta-lactamase superfamily domain BM524_10635 PF17770 Ribonuclease J C-terminal domain BM524_10635 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BM524_10650 PF03466 LysR substrate binding domain BM524_10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_10665 PF01022 Bacterial regulatory protein, arsR family BM524_10675 PF03466 LysR substrate binding domain BM524_10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_10685 PF00072 Response regulator receiver domain BM524_10685 PF00158 Sigma-54 interaction domain BM524_10685 PF02954 Bacterial regulatory protein, Fis family BM524_10695 PF00360 Phytochrome region BM524_10695 PF00512 His Kinase A (phospho-acceptor) domain BM524_10695 PF08446 PAS fold BM524_10695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_10695 PF01590 GAF domain BM524_10700 PF00072 Response regulator receiver domain BM524_10705 PF00512 His Kinase A (phospho-acceptor) domain BM524_10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_10705 PF09308 LuxQ, periplasmic BM524_10705 PF00072 Response regulator receiver domain BM524_10735 PF07043 Protein of unknown function (DUF1328) BM524_10755 PF07023 Protein of unknown function (DUF1315) BM524_10770 PF01235 Sodium:alanine symporter family BM524_10775 PF18027 Cytosolic carboxypeptidase N-terminal domain BM524_10775 PF00246 Zinc carboxypeptidase BM524_10780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM524_10780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BM524_10790 PF01641 SelR domain BM524_10795 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BM524_10795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM524_10800 PF00128 Alpha amylase, catalytic domain BM524_10800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BM524_10805 PF02806 Alpha amylase, C-terminal all-beta domain BM524_10805 PF00128 Alpha amylase, catalytic domain BM524_10805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BM524_10810 PF02446 4-alpha-glucanotransferase BM524_10815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM524_10815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BM524_10820 PF01263 Aldose 1-epimerase BM524_10825 PF01081 KDPG and KHG aldolase BM524_10830 PF02685 Glucokinase BM524_10835 PF00920 Dehydratase family BM524_10840 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BM524_10845 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BM524_10845 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BM524_10850 PF01380 SIS domain BM524_10850 PF01418 Helix-turn-helix domain, rpiR family BM524_10855 PF00224 Pyruvate kinase, barrel domain BM524_10855 PF02887 Pyruvate kinase, alpha/beta domain BM524_10860 PF01048 Phosphorylase superfamily BM524_10870 PF08787 Alginate lyase BM524_10875 PF04972 BON domain BM524_10905 PF09347 Domain of unknown function (DUF1989) BM524_10930 PF04962 KduI/IolB family BM524_10935 PF03480 Bacterial extracellular solute-binding protein, family 7 BM524_10940 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BM524_10945 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BM524_10950 PF00356 Bacterial regulatory proteins, lacI family BM524_10955 PF08666 SAF domain BM524_10955 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BM524_10960 PF02614 Glucuronate isomerase BM524_10965 PF01232 Mannitol dehydrogenase Rossmann domain BM524_10965 PF08125 Mannitol dehydrogenase C-terminal domain BM524_10970 PF01081 KDPG and KHG aldolase BM524_10975 PF00294 pfkB family carbohydrate kinase BM524_10980 PF13472 GDSL-like Lipase/Acylhydrolase family BM524_10990 PF07470 Glycosyl Hydrolase Family 88 BM524_10995 PF00295 Glycosyl hydrolases family 28 BM524_11000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_11000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM524_11000 PF00072 Response regulator receiver domain BM524_11000 PF01627 Hpt domain BM524_11000 PF00512 His Kinase A (phospho-acceptor) domain BM524_11000 PF00672 HAMP domain BM524_11015 PF04231 Endonuclease I BM524_11020 PF00672 HAMP domain BM524_11020 PF02743 Cache domain BM524_11020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_11035 PF03466 LysR substrate binding domain BM524_11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_11040 PF00465 Iron-containing alcohol dehydrogenase BM524_11045 PF08447 PAS fold BM524_11045 PF00563 EAL domain BM524_11045 PF08448 PAS fold BM524_11045 PF00990 Diguanylate cyclase, GGDEF domain BM524_11055 PF11849 Domain of unknown function (DUF3369) BM524_11060 PF00512 His Kinase A (phospho-acceptor) domain BM524_11060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_11060 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM524_11075 PF00939 Sodium:sulfate symporter transmembrane region BM524_11080 PF00692 dUTPase BM524_11085 PF10609 NUBPL iron-transfer P-loop NTPase BM524_11090 PF08264 Anticodon-binding domain of tRNA BM524_11090 PF01588 Putative tRNA binding domain BM524_11090 PF09334 tRNA synthetases class I (M) BM524_11095 PF00924 Mechanosensitive ion channel BM524_11095 PF05552 Conserved TM helix BM524_11100 PF08241 Methyltransferase domain BM524_11105 PF00753 Metallo-beta-lactamase superfamily BM524_11105 PF16123 Hydroxyacylglutathione hydrolase C-terminus BM524_11110 PF01464 Transglycosylase SLT domain BM524_11110 PF01476 LysM domain BM524_11120 PF09190 DALR domain BM524_11120 PF01406 tRNA synthetases class I (C) catalytic domain BM524_11125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BM524_11130 PF00149 Calcineurin-like phosphoesterase BM524_11140 PF01145 SPFH domain / Band 7 family BM524_11140 PF15975 Flotillin BM524_11150 PF00128 Alpha amylase, catalytic domain BM524_11155 PF01638 HxlR-like helix-turn-helix BM524_11160 PF08240 Alcohol dehydrogenase GroES-like domain BM524_11160 PF00107 Zinc-binding dehydrogenase BM524_11165 PF18011 C-terminal domain found in long catalases BM524_11165 PF06628 Catalase-related immune-responsive BM524_11165 PF00199 Catalase BM524_11170 PF08240 Alcohol dehydrogenase GroES-like domain BM524_11170 PF00107 Zinc-binding dehydrogenase BM524_11175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_11175 PF03466 LysR substrate binding domain BM524_11190 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BM524_11200 PF00156 Phosphoribosyl transferase domain BM524_11205 PF02674 Colicin V production protein BM524_11210 PF05036 Sporulation related domain BM524_11215 PF08245 Mur ligase middle domain BM524_11215 PF02875 Mur ligase family, glutamate ligase domain BM524_11220 PF01039 Carboxyl transferase domain BM524_11220 PF17848 Acetyl-coA carboxylase zinc finger domain BM524_11225 PF01416 tRNA pseudouridine synthase BM524_11235 PF01118 Semialdehyde dehydrogenase, NAD binding domain BM524_11235 PF02774 Semialdehyde dehydrogenase, dimerisation domain BM524_11240 PF11890 Domain of unknown function (DUF3410) BM524_11240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM524_11240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM524_11245 PF00596 Class II Aldolase and Adducin N-terminal domain BM524_11260 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BM524_11265 PF00144 Beta-lactamase BM524_11270 PF02801 Beta-ketoacyl synthase, C-terminal domain BM524_11270 PF00109 Beta-ketoacyl synthase, N-terminal domain BM524_11285 PF01266 FAD dependent oxidoreductase BM524_11285 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BM524_11315 PF08240 Alcohol dehydrogenase GroES-like domain BM524_11315 PF00107 Zinc-binding dehydrogenase BM524_11345 PF00005 ABC transporter BM524_11350 PF02667 Short chain fatty acid transporter BM524_11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_11355 PF00512 His Kinase A (phospho-acceptor) domain BM524_11355 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM524_11355 PF00072 Response regulator receiver domain BM524_11355 PF01627 Hpt domain BM524_11355 PF00672 HAMP domain BM524_11360 PF02627 Carboxymuconolactone decarboxylase family BM524_11365 PF05193 Peptidase M16 inactive domain BM524_11365 PF00675 Insulinase (Peptidase family M16) BM524_11380 PF04315 Elongation factor P hydroxylase BM524_11405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM524_11405 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_11410 PF00378 Enoyl-CoA hydratase/isomerase BM524_11415 PF02909 Tetracyclin repressor-like, C-terminal domain BM524_11415 PF00440 Bacterial regulatory proteins, tetR family BM524_11420 PF00732 GMC oxidoreductase BM524_11420 PF05199 GMC oxidoreductase BM524_11430 PF06974 Protein of unknown function (DUF1298) BM524_11430 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BM524_11440 PF04286 Protein of unknown function (DUF445) BM524_11465 PF00326 Prolyl oligopeptidase family BM524_11465 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BM524_11470 PF00392 Bacterial regulatory proteins, gntR family BM524_11470 PF07840 FadR C-terminal domain BM524_11475 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BM524_11480 PF02600 Disulfide bond formation protein DsbB BM524_11485 PF13302 Acetyltransferase (GNAT) domain BM524_11495 PF03692 Putative zinc- or iron-chelating domain BM524_11500 PF01557 Fumarylacetoacetate (FAA) hydrolase family BM524_11510 PF05166 YcgL domain BM524_11515 PF01612 3'-5' exonuclease BM524_11515 PF00570 HRDC domain BM524_11520 PF13193 AMP-binding enzyme C-terminal domain BM524_11520 PF00501 AMP-binding enzyme BM524_11525 PF12697 Alpha/beta hydrolase family BM524_11540 PF00814 Glycoprotease family BM524_11545 PF13307 Helicase C-terminal domain BM524_11545 PF06733 DEAD_2 BM524_11570 PF00128 Alpha amylase, catalytic domain BM524_11605 PF07715 TonB-dependent Receptor Plug Domain BM524_11605 PF00593 TonB dependent receptor BM524_11615 PF01634 ATP phosphoribosyltransferase BM524_11615 PF08029 HisG, C-terminal domain BM524_11620 PF00815 Histidinol dehydrogenase BM524_11625 PF00155 Aminotransferase class I and II BM524_11630 PF00475 Imidazoleglycerol-phosphate dehydratase BM524_11635 PF00117 Glutamine amidotransferase class-I BM524_11640 PF00977 Histidine biosynthesis protein BM524_11645 PF00977 Histidine biosynthesis protein BM524_11650 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BM524_11650 PF01502 Phosphoribosyl-AMP cyclohydrolase BM524_11655 PF01226 Formate/nitrite transporter BM524_11660 PF00672 HAMP domain BM524_11660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_11670 PF07715 TonB-dependent Receptor Plug Domain BM524_11670 PF00593 TonB dependent receptor BM524_11685 PF05191 Adenylate kinase, active site lid BM524_11690 PF00183 Hsp90 protein BM524_11690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_11695 PF13662 Toprim domain BM524_11695 PF02132 RecR protein BM524_11705 PF00512 His Kinase A (phospho-acceptor) domain BM524_11705 PF01590 GAF domain BM524_11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_11705 PF00360 Phytochrome region BM524_11705 PF08446 PAS fold BM524_11710 PF02575 YbaB/EbfC DNA-binding family BM524_11715 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BM524_11715 PF12169 DNA polymerase III subunits gamma and tau domain III BM524_11715 PF12170 DNA polymerase III tau subunit V interacting with alpha BM524_11720 PF00156 Phosphoribosyl transferase domain BM524_11730 PF05114 Protein of unknown function (DUF692) BM524_11750 PF00360 Phytochrome region BM524_11750 PF01590 GAF domain BM524_11750 PF00990 Diguanylate cyclase, GGDEF domain BM524_11750 PF00563 EAL domain BM524_11780 PF01066 CDP-alcohol phosphatidyltransferase BM524_11800 PF01565 FAD binding domain BM524_11800 PF09330 D-lactate dehydrogenase, membrane binding BM524_11805 PF02861 Clp amino terminal domain, pathogenicity island component BM524_11805 PF10431 C-terminal, D2-small domain, of ClpB protein BM524_11805 PF00004 ATPase family associated with various cellular activities (AAA) BM524_11805 PF07724 AAA domain (Cdc48 subfamily) BM524_11805 PF17871 AAA lid domain BM524_11815 PF01479 S4 domain BM524_11815 PF00849 RNA pseudouridylate synthase BM524_11820 PF13525 Outer membrane lipoprotein BM524_11830 PF04545 Sigma-70, region 4 BM524_11830 PF04542 Sigma-70 region 2 BM524_11845 PF00106 short chain dehydrogenase BM524_11865 PF13677 Membrane MotB of proton-channel complex MotA/MotB BM524_11865 PF00691 OmpA family BM524_11870 PF01618 MotA/TolQ/ExbB proton channel family BM524_11875 PF02609 Exonuclease VII small subunit BM524_11880 PF00348 Polyprenyl synthetase BM524_11885 PF02779 Transketolase, pyrimidine binding domain BM524_11885 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BM524_11885 PF02780 Transketolase, C-terminal domain BM524_11890 PF04608 Phosphatidylglycerophosphatase A BM524_11895 PF02769 AIR synthase related protein, C-terminal domain BM524_11895 PF00586 AIR synthase related protein, N-terminal domain BM524_11900 PF01029 NusB family BM524_11905 PF00885 6,7-dimethyl-8-ribityllumazine synthase BM524_11910 PF00925 GTP cyclohydrolase II BM524_11910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BM524_11915 PF00677 Lumazine binding domain BM524_11920 PF01872 RibD C-terminal domain BM524_11920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BM524_11925 PF03477 ATP cone domain BM524_11930 PF00464 Serine hydroxymethyltransferase BM524_11940 PF12848 ABC transporter BM524_11940 PF00005 ABC transporter BM524_11950 PF18073 Rubredoxin metal binding domain BM524_11960 PF18429 Domain of unknown function (DUF5609) BM524_11970 PF01026 TatD related DNase BM524_11975 PF01243 Pyridoxamine 5'-phosphate oxidase BM524_11975 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BM524_11980 PF07650 KH domain BM524_11980 PF01926 50S ribosome-binding GTPase BM524_11985 PF14622 Ribonuclease-III-like BM524_11985 PF00035 Double-stranded RNA binding motif BM524_11990 PF10502 Signal peptidase, peptidase S26 BM524_11995 PF06421 GTP-binding protein LepA C-terminus BM524_11995 PF03144 Elongation factor Tu domain 2 BM524_11995 PF00009 Elongation factor Tu GTP binding domain BM524_11995 PF00679 Elongation factor G C-terminus BM524_12005 PF17188 MucB/RseB C-terminal domain BM524_12005 PF03888 MucB/RseB N-terminal domain BM524_12015 PF04542 Sigma-70 region 2 BM524_12015 PF08281 Sigma-70, region 4 BM524_12020 PF02910 Fumarate reductase flavoprotein C-term BM524_12020 PF00890 FAD binding domain BM524_12035 PF03937 Flavinator of succinate dehydrogenase BM524_12045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM524_12050 PF00543 Nitrogen regulatory protein P-II BM524_12055 PF02540 NAD synthase BM524_12090 PF00114 Pilin (bacterial filament) BM524_12090 PF07963 Prokaryotic N-terminal methylation motif BM524_12115 PF02401 LytB protein BM524_12120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM524_12125 PF01252 Signal peptidase (SPase) II BM524_12130 PF08264 Anticodon-binding domain of tRNA BM524_12130 PF00133 tRNA synthetases class I (I, L, M and V) BM524_12130 PF06827 Zinc finger found in FPG and IleRS BM524_12135 PF06574 FAD synthetase BM524_12135 PF01687 Riboflavin kinase BM524_12140 PF03023 Lipid II flippase MurJ BM524_12145 PF01649 Ribosomal protein S20 BM524_12150 PF00106 short chain dehydrogenase BM524_12165 PF01758 Sodium Bile acid symporter family BM524_12170 PF03466 LysR substrate binding domain BM524_12170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_12190 PF01546 Peptidase family M20/M25/M40 BM524_12190 PF07687 Peptidase dimerisation domain BM524_12200 PF13145 PPIC-type PPIASE domain BM524_12205 PF00216 Bacterial DNA-binding protein BM524_12210 PF02190 ATP-dependent protease La (LON) substrate-binding domain BM524_12210 PF05362 Lon protease (S16) C-terminal proteolytic domain BM524_12210 PF00004 ATPase family associated with various cellular activities (AAA) BM524_12215 PF06689 ClpX C4-type zinc finger BM524_12215 PF07724 AAA domain (Cdc48 subfamily) BM524_12215 PF10431 C-terminal, D2-small domain, of ClpB protein BM524_12220 PF00574 Clp protease BM524_12225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM524_12225 PF05698 Bacterial trigger factor protein (TF) C-terminus BM524_12225 PF05697 Bacterial trigger factor protein (TF) BM524_12255 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BM524_12255 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BM524_12265 PF01980 tRNA-methyltransferase O BM524_12265 PF18389 TrmO C-terminal domain BM524_12270 PF03129 Anticodon binding domain BM524_12270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BM524_12275 PF00753 Metallo-beta-lactamase superfamily BM524_12275 PF12706 Beta-lactamase superfamily domain BM524_12280 PF02253 Phospholipase A1 BM524_12285 PF00850 Histone deacetylase domain BM524_12290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_12290 PF00672 HAMP domain BM524_12290 PF02743 Cache domain BM524_12295 PF02540 NAD synthase BM524_12295 PF00958 GMP synthase C terminal domain BM524_12295 PF00117 Glutamine amidotransferase class-I BM524_12300 PF00478 IMP dehydrogenase / GMP reductase domain BM524_12300 PF00571 CBS domain BM524_12305 PF02601 Exonuclease VII, large subunit BM524_12305 PF13742 OB-fold nucleic acid binding domain BM524_12320 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BM524_12320 PF01926 50S ribosome-binding GTPase BM524_12325 PF13360 PQQ-like domain BM524_12330 PF09976 Tetratricopeptide repeat-like domain BM524_12335 PF03129 Anticodon binding domain BM524_12335 PF13393 Histidyl-tRNA synthetase BM524_12340 PF04551 GcpE protein BM524_12345 PF13464 Domain of unknown function (DUF4115) BM524_12355 PF04055 Radical SAM superfamily BM524_12360 PF00334 Nucleoside diphosphate kinase BM524_12365 PF02657 Fe-S metabolism associated domain BM524_12370 PF01883 Iron-sulfur cluster assembly protein BM524_12375 PF01521 Iron-sulphur cluster biosynthesis BM524_12380 PF00266 Aminotransferase class-V BM524_12385 PF01458 Uncharacterized protein family (UPF0051) BM524_12390 PF00005 ABC transporter BM524_12395 PF01458 Uncharacterized protein family (UPF0051) BM524_12400 PF00266 Aminotransferase class-V BM524_12405 PF02082 Transcriptional regulator BM524_12410 PF00743 Flavin-binding monooxygenase-like BM524_12415 PF06426 Serine acetyltransferase, N-terminal BM524_12415 PF00132 Bacterial transferase hexapeptide (six repeats) BM524_12420 PF00588 SpoU rRNA Methylase family BM524_12425 PF00459 Inositol monophosphatase family BM524_12440 PF02355 Protein export membrane protein BM524_12440 PF07549 SecD/SecF GG Motif BM524_12445 PF07549 SecD/SecF GG Motif BM524_12445 PF13721 SecD export protein N-terminal TM region BM524_12445 PF02355 Protein export membrane protein BM524_12450 PF02699 Preprotein translocase subunit BM524_12455 PF01702 Queuine tRNA-ribosyltransferase BM524_12460 PF02547 Queuosine biosynthesis protein BM524_12475 PF04012 PspA/IM30 family BM524_12480 PF07885 Ion channel BM524_12495 PF06693 Protein of unknown function (DUF1190) BM524_12500 PF03738 Glutathionylspermidine synthase preATP-grasp BM524_12515 PF00005 ABC transporter BM524_12530 PF04960 Glutaminase BM524_12535 PF00245 Alkaline phosphatase BM524_12540 PF00072 Response regulator receiver domain BM524_12545 PF00463 Isocitrate lyase family BM524_12550 PF03466 LysR substrate binding domain BM524_12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_12555 PF01274 Malate synthase BM524_12565 PF01370 NAD dependent epimerase/dehydratase family BM524_12595 PF17820 PDZ domain BM524_12595 PF13180 PDZ domain BM524_12620 PF00534 Glycosyl transferases group 1 BM524_12640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BM524_12640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BM524_12640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BM524_12645 PF02350 UDP-N-acetylglucosamine 2-epimerase BM524_12665 PF00534 Glycosyl transferases group 1 BM524_12665 PF13439 Glycosyltransferase Family 4 BM524_12670 PF00733 Asparagine synthase BM524_12670 PF13537 Glutamine amidotransferase domain BM524_12680 PF00535 Glycosyl transferase family 2 BM524_12690 PF00535 Glycosyl transferase family 2 BM524_12710 PF00733 Asparagine synthase BM524_12710 PF13537 Glutamine amidotransferase domain BM524_12725 PF01522 Polysaccharide deacetylase BM524_12730 PF02397 Bacterial sugar transferase BM524_12745 PF13614 AAA domain BM524_12755 PF13401 AAA domain BM524_12755 PF01471 Putative peptidoglycan binding domain BM524_12760 PF01467 Cytidylyltransferase-like BM524_12760 PF00294 pfkB family carbohydrate kinase BM524_12765 PF01541 GIY-YIG catalytic domain BM524_12780 PF08335 GlnD PII-uridylyltransferase BM524_12780 PF03710 Glutamate-ammonia ligase adenylyltransferase BM524_12790 PF03279 Bacterial lipid A biosynthesis acyltransferase BM524_12805 PF02770 Acyl-CoA dehydrogenase, middle domain BM524_12805 PF09317 Domain of unknown function (DUF1974) BM524_12805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM524_12805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM524_12820 PF13188 PAS domain BM524_12820 PF03707 Bacterial signalling protein N terminal repeat BM524_12820 PF00990 Diguanylate cyclase, GGDEF domain BM524_12820 PF00563 EAL domain BM524_12825 PF00265 Thymidine kinase BM524_12835 PF00356 Bacterial regulatory proteins, lacI family BM524_12870 PF01926 50S ribosome-binding GTPase BM524_12875 PF08032 RNA 2'-O ribose methyltransferase substrate binding BM524_12875 PF00588 SpoU rRNA Methylase family BM524_12880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM524_12880 PF00378 Enoyl-CoA hydratase/isomerase BM524_12880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM524_12895 PF00171 Aldehyde dehydrogenase family BM524_12900 PF00732 GMC oxidoreductase BM524_12900 PF05199 GMC oxidoreductase BM524_12915 PF05971 RNA methyltransferase BM524_12920 PF09278 MerR, DNA binding BM524_12920 PF00376 MerR family regulatory protein BM524_12950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM524_12950 PF02770 Acyl-CoA dehydrogenase, middle domain BM524_12950 PF18158 Adaptive response protein AidB N-terminal domain BM524_12970 PF00072 Response regulator receiver domain BM524_12970 PF00486 Transcriptional regulatory protein, C terminal BM524_12975 PF00672 HAMP domain BM524_12975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_12975 PF16527 Two-component sensor protein CpxA, periplasmic domain BM524_12975 PF00512 His Kinase A (phospho-acceptor) domain BM524_12985 PF03965 Penicillinase repressor BM524_12990 PF03544 Gram-negative bacterial TonB protein C-terminal BM524_13005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM524_13015 PF00111 2Fe-2S iron-sulfur cluster binding domain BM524_13015 PF01799 [2Fe-2S] binding domain BM524_13020 PF03450 CO dehydrogenase flavoprotein C-terminal domain BM524_13020 PF00941 FAD binding domain in molybdopterin dehydrogenase BM524_13025 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM524_13025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM524_13050 PF00106 short chain dehydrogenase BM524_13055 PF01965 DJ-1/PfpI family BM524_13060 PF03631 Virulence factor BrkB BM524_13075 PF07152 YaeQ protein BM524_13105 PF07690 Major Facilitator Superfamily BM524_13125 PF16124 RecQ zinc-binding BM524_13125 PF00570 HRDC domain BM524_13125 PF00270 DEAD/DEAH box helicase BM524_13125 PF00271 Helicase conserved C-terminal domain BM524_13125 PF09382 RQC domain BM524_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_13145 PF00512 His Kinase A (phospho-acceptor) domain BM524_13145 PF01627 Hpt domain BM524_13145 PF00072 Response regulator receiver domain BM524_13145 PF00672 HAMP domain BM524_13145 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM524_13155 PF01590 GAF domain BM524_13155 PF08446 PAS fold BM524_13155 PF00512 His Kinase A (phospho-acceptor) domain BM524_13155 PF00360 Phytochrome region BM524_13155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_13160 PF07995 Glucose / Sorbosone dehydrogenase BM524_13165 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BM524_13175 PF00072 Response regulator receiver domain BM524_13175 PF00486 Transcriptional regulatory protein, C terminal BM524_13180 PF00512 His Kinase A (phospho-acceptor) domain BM524_13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_13180 PF00989 PAS fold BM524_13180 PF11808 Phosphate regulon sensor protein PhoR BM524_13230 PF00665 Integrase core domain BM524_13230 PF13936 Helix-turn-helix domain BM524_13240 PF01597 Glycine cleavage H-protein BM524_13245 PF01571 Aminomethyltransferase folate-binding domain BM524_13245 PF08669 Glycine cleavage T-protein C-terminal barrel domain BM524_13250 PF01979 Amidohydrolase family BM524_13255 PF01869 BadF/BadG/BcrA/BcrD ATPase family BM524_13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_13260 PF03466 LysR substrate binding domain BM524_13265 PF02652 L-lactate permease BM524_13275 PF01321 Creatinase/Prolidase N-terminal domain BM524_13275 PF00557 Metallopeptidase family M24 BM524_13285 PF01494 FAD binding domain BM524_13290 PF01494 FAD binding domain BM524_13295 PF05195 Aminopeptidase P, N-terminal domain BM524_13295 PF00557 Metallopeptidase family M24 BM524_13300 PF03695 Uncharacterised protein family (UPF0149) BM524_13310 PF00294 pfkB family carbohydrate kinase BM524_13315 PF01156 Inosine-uridine preferring nucleoside hydrolase BM524_13320 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM524_13320 PF00989 PAS fold BM524_13320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_13320 PF00512 His Kinase A (phospho-acceptor) domain BM524_13320 PF01627 Hpt domain BM524_13320 PF00072 Response regulator receiver domain BM524_13325 PF01812 5-formyltetrahydrofolate cyclo-ligase family BM524_13330 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BM524_13335 PF01842 ACT domain BM524_13335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM524_13335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM524_13355 PF06945 Protein of unknown function (DUF1289) BM524_13365 PF00873 AcrB/AcrD/AcrF family BM524_13370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM524_13375 PF03466 LysR substrate binding domain BM524_13375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_13390 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_13390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM524_13395 PF02817 e3 binding domain BM524_13395 PF00364 Biotin-requiring enzyme BM524_13395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BM524_13400 PF00456 Transketolase, thiamine diphosphate binding domain BM524_13400 PF17831 Pyruvate dehydrogenase E1 component middle domain BM524_13405 PF07729 FCD domain BM524_13405 PF00392 Bacterial regulatory proteins, gntR family BM524_13415 PF01510 N-acetylmuramoyl-L-alanine amidase BM524_13425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BM524_13425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BM524_13435 PF00482 Type II secretion system (T2SS), protein F BM524_13440 PF06750 Bacterial Peptidase A24 N-terminal domain BM524_13440 PF01478 Type IV leader peptidase family BM524_13445 PF01121 Dephospho-CoA kinase BM524_13450 PF07072 Cell division protein BM524_13460 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BM524_13465 PF00293 NUDIX domain BM524_13470 PF02810 SEC-C motif BM524_13470 PF07517 SecA DEAD-like domain BM524_13470 PF07516 SecA Wing and Scaffold domain BM524_13470 PF01043 SecA preprotein cross-linking domain BM524_13475 PF08525 Opacity-associated protein A N-terminal motif BM524_13475 PF01476 LysM domain BM524_13475 PF01551 Peptidase family M23 BM524_13480 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BM524_13485 PF12327 FtsZ family, C-terminal domain BM524_13485 PF00091 Tubulin/FtsZ family, GTPase domain BM524_13490 PF02491 SHS2 domain inserted in FTSA BM524_13495 PF03799 Cell division protein FtsQ BM524_13495 PF08478 POTRA domain, FtsQ-type BM524_13500 PF07478 D-ala D-ala ligase C-terminus BM524_13500 PF01820 D-ala D-ala ligase N-terminus BM524_13505 PF01225 Mur ligase family, catalytic domain BM524_13505 PF08245 Mur ligase middle domain BM524_13505 PF02875 Mur ligase family, glutamate ligase domain BM524_13510 PF04101 Glycosyltransferase family 28 C-terminal domain BM524_13510 PF03033 Glycosyltransferase family 28 N-terminal domain BM524_13515 PF01098 Cell cycle protein BM524_13520 PF08245 Mur ligase middle domain BM524_13520 PF02875 Mur ligase family, glutamate ligase domain BM524_13525 PF00953 Glycosyl transferase family 4 BM524_13525 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BM524_13530 PF01225 Mur ligase family, catalytic domain BM524_13530 PF02875 Mur ligase family, glutamate ligase domain BM524_13530 PF08245 Mur ligase middle domain BM524_13535 PF01225 Mur ligase family, catalytic domain BM524_13535 PF08245 Mur ligase middle domain BM524_13535 PF02875 Mur ligase family, glutamate ligase domain BM524_13540 PF00905 Penicillin binding protein transpeptidase domain BM524_13540 PF03717 Penicillin-binding Protein dimerisation domain BM524_13545 PF04999 Cell division protein FtsL BM524_13550 PF01795 MraW methylase family BM524_13555 PF02381 MraZ protein, putative antitoxin-like BM524_13575 PF00873 AcrB/AcrD/AcrF family BM524_13580 PF00529 HlyD membrane-fusion protein of T1SS BM524_13580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM524_13600 PF00462 Glutaredoxin BM524_13600 PF08534 Redoxin BM524_13605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BM524_13615 PF17158 Membrane-associated sensor, integral membrane domain BM524_13615 PF00990 Diguanylate cyclase, GGDEF domain BM524_13625 PF00158 Sigma-54 interaction domain BM524_13625 PF00072 Response regulator receiver domain BM524_13625 PF02954 Bacterial regulatory protein, Fis family BM524_13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_13630 PF00512 His Kinase A (phospho-acceptor) domain BM524_13630 PF00072 Response regulator receiver domain BM524_13630 PF09456 RcsC Alpha-Beta-Loop (ABL) BM524_13635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BM524_13635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BM524_13640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BM524_13640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM524_13645 PF07690 Major Facilitator Superfamily BM524_13670 PF05552 Conserved TM helix BM524_13670 PF00924 Mechanosensitive ion channel BM524_13675 PF04452 RNA methyltransferase BM524_13680 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BM524_13680 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BM524_13685 PF02622 Uncharacterized ACR, COG1678 BM524_13690 PF03652 Holliday junction resolvase BM524_13700 PF00437 Type II/IV secretion system protein BM524_13705 PF00437 Type II/IV secretion system protein BM524_13710 PF01168 Alanine racemase, N-terminal domain BM524_13715 PF03807 NADP oxidoreductase coenzyme F420-dependent BM524_13715 PF14748 Pyrroline-5-carboxylate reductase dimerisation BM524_13720 PF02325 YGGT family BM524_13730 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_13730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM524_13745 PF14834 Glutathione S-transferase, C-terminal domain BM524_13745 PF02798 Glutathione S-transferase, N-terminal domain BM524_13750 PF00080 Copper/zinc superoxide dismutase (SODC) BM524_13755 PF02566 OsmC-like protein BM524_13760 PF01625 Peptide methionine sulfoxide reductase BM524_13775 PF03591 AzlC protein BM524_13785 PF07690 Major Facilitator Superfamily BM524_13790 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BM524_13795 PF03883 Peroxide stress protein YaaA BM524_13805 PF00923 Transaldolase/Fructose-6-phosphate aldolase BM524_13810 PF00342 Phosphoglucose isomerase BM524_13815 PF03167 Uracil DNA glycosylase superfamily BM524_13820 PF14821 Threonine synthase N terminus BM524_13820 PF00291 Pyridoxal-phosphate dependent enzyme BM524_13825 PF08544 GHMP kinases C terminal BM524_13825 PF00288 GHMP kinases N terminal domain BM524_13830 PF00742 Homoserine dehydrogenase BM524_13830 PF13840 ACT domain BM524_13830 PF01842 ACT domain BM524_13830 PF03447 Homoserine dehydrogenase, NAD binding domain BM524_13830 PF00696 Amino acid kinase family BM524_13835 PF17755 UvrA DNA-binding domain BM524_13840 PF03466 LysR substrate binding domain BM524_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_13845 PF00107 Zinc-binding dehydrogenase BM524_13845 PF08240 Alcohol dehydrogenase GroES-like domain BM524_13855 PF01022 Bacterial regulatory protein, arsR family BM524_13865 PF03358 NADPH-dependent FMN reductase BM524_13870 PF01758 Sodium Bile acid symporter family BM524_13875 PF00072 Response regulator receiver domain BM524_13875 PF01339 CheB methylesterase BM524_13880 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BM524_13885 PF00072 Response regulator receiver domain BM524_13885 PF00486 Transcriptional regulatory protein, C terminal BM524_13890 PF00672 HAMP domain BM524_13890 PF00512 His Kinase A (phospho-acceptor) domain BM524_13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_13905 PF00291 Pyridoxal-phosphate dependent enzyme BM524_13915 PF04116 Fatty acid hydroxylase superfamily BM524_13935 PF16653 Saccharopine dehydrogenase C-terminal domain BM524_13935 PF03435 Saccharopine dehydrogenase NADP binding domain BM524_13940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BM524_13950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BM524_13955 PF04348 LppC putative lipoprotein BM524_13960 PF02021 Uncharacterised protein family UPF0102 BM524_13965 PF00534 Glycosyl transferases group 1 BM524_13970 PF13580 SIS domain BM524_13975 PF04972 BON domain BM524_13980 PF07690 Major Facilitator Superfamily BM524_13995 PF00593 TonB dependent receptor BM524_13995 PF07715 TonB-dependent Receptor Plug Domain BM524_14010 PF00285 Citrate synthase, C-terminal domain BM524_14015 PF00330 Aconitase family (aconitate hydratase) BM524_14015 PF00694 Aconitase C-terminal domain BM524_14020 PF04303 PrpF protein BM524_14025 PF00990 Diguanylate cyclase, GGDEF domain BM524_14030 PF00474 Sodium:solute symporter family BM524_14045 PF00512 His Kinase A (phospho-acceptor) domain BM524_14045 PF00989 PAS fold BM524_14045 PF00072 Response regulator receiver domain BM524_14045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_14045 PF01627 Hpt domain BM524_14045 PF18415 Histidine kinase receptor ArcB trans-membrane domain BM524_14050 PF01510 N-acetylmuramoyl-L-alanine amidase BM524_14055 PF01493 GXGXG motif BM524_14055 PF01645 Conserved region in glutamate synthase BM524_14055 PF04898 Glutamate synthase central domain BM524_14055 PF00310 Glutamine amidotransferases class-II BM524_14060 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_14060 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BM524_14080 PF01048 Phosphorylase superfamily BM524_14085 PF03186 CobD/Cbib protein BM524_14090 PF01497 Periplasmic binding protein BM524_14095 PF00581 Rhodanese-like domain BM524_14110 PF01266 FAD dependent oxidoreductase BM524_14115 PF07237 Protein of unknown function (DUF1428) BM524_14120 PF00579 tRNA synthetases class I (W and Y) BM524_14125 PF01476 LysM domain BM524_14125 PF01551 Peptidase family M23 BM524_14130 PF03702 Anhydro-N-acetylmuramic acid kinase BM524_14135 PF07690 Major Facilitator Superfamily BM524_14140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM524_14150 PF01053 Cys/Met metabolism PLP-dependent enzyme BM524_14155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM524_14155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM524_14160 PF00043 Glutathione S-transferase, C-terminal domain BM524_14160 PF13417 Glutathione S-transferase, N-terminal domain BM524_14165 PF01521 Iron-sulphur cluster biosynthesis BM524_14175 PF03976 Polyphosphate kinase 2 (PPK2) BM524_14180 PF03776 Septum formation topological specificity factor MinE BM524_14185 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BM524_14190 PF05209 Septum formation inhibitor MinC, N-terminal domain BM524_14190 PF03775 Septum formation inhibitor MinC, C-terminal domain BM524_14195 PF00206 Lyase BM524_14195 PF10415 Fumarase C C-terminus BM524_14200 PF00127 Copper binding proteins, plastocyanin/azurin family BM524_14235 PF01566 Natural resistance-associated macrophage protein BM524_14240 PF00155 Aminotransferase class I and II BM524_14245 PF08448 PAS fold BM524_14245 PF00512 His Kinase A (phospho-acceptor) domain BM524_14245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_14245 PF00072 Response regulator receiver domain BM524_14245 PF13188 PAS domain BM524_14255 PF00120 Glutamine synthetase, catalytic domain BM524_14255 PF03951 Glutamine synthetase, beta-Grasp domain BM524_14265 PF00989 PAS fold BM524_14265 PF00512 His Kinase A (phospho-acceptor) domain BM524_14265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_14270 PF02954 Bacterial regulatory protein, Fis family BM524_14270 PF00072 Response regulator receiver domain BM524_14270 PF00158 Sigma-54 interaction domain BM524_14275 PF00072 Response regulator receiver domain BM524_14280 PF01553 Acyltransferase BM524_14285 PF06877 Regulator of ribonuclease activity B BM524_14295 PF17158 Membrane-associated sensor, integral membrane domain BM524_14295 PF00990 Diguanylate cyclase, GGDEF domain BM524_14315 PF00672 HAMP domain BM524_14315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM524_14315 PF00512 His Kinase A (phospho-acceptor) domain BM524_14315 PF01627 Hpt domain BM524_14315 PF00072 Response regulator receiver domain BM524_14315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_14320 PF10458 Valyl tRNA synthetase tRNA binding arm BM524_14320 PF08264 Anticodon-binding domain of tRNA BM524_14320 PF00133 tRNA synthetases class I (I, L, M and V) BM524_14325 PF04364 DNA polymerase III chi subunit, HolC BM524_14330 PF02789 Cytosol aminopeptidase family, N-terminal domain BM524_14330 PF00883 Cytosol aminopeptidase family, catalytic domain BM524_14335 PF03739 Lipopolysaccharide export system permease LptF/LptG BM524_14340 PF03739 Lipopolysaccharide export system permease LptF/LptG BM524_14355 PF04542 Sigma-70 region 2 BM524_14355 PF04545 Sigma-70, region 4 BM524_14400 PF00689 Cation transporting ATPase, C-terminus BM524_14400 PF00690 Cation transporter/ATPase, N-terminus BM524_14410 PF10091 Putative glucoamylase BM524_14410 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BM524_14410 PF06165 Glycosyltransferase family 36 BM524_14420 PF13185 GAF domain BM524_14420 PF00990 Diguanylate cyclase, GGDEF domain BM524_14450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM524_14450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM524_14455 PF00512 His Kinase A (phospho-acceptor) domain BM524_14455 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM524_14455 PF00072 Response regulator receiver domain BM524_14455 PF01627 Hpt domain BM524_14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_14460 PF01594 AI-2E family transporter BM524_14475 PF00005 ABC transporter BM524_14480 PF01032 FecCD transport family BM524_14485 PF01497 Periplasmic binding protein BM524_14495 PF00593 TonB dependent receptor BM524_14495 PF07715 TonB-dependent Receptor Plug Domain BM524_14505 PF00230 Major intrinsic protein BM524_14510 PF00892 EamA-like transporter family BM524_14525 PF00593 TonB dependent receptor BM524_14525 PF07715 TonB-dependent Receptor Plug Domain BM524_14540 PF00753 Metallo-beta-lactamase superfamily BM524_14540 PF10996 Beta-Casp domain BM524_14540 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BM524_14545 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BM524_14550 PF01321 Creatinase/Prolidase N-terminal domain BM524_14550 PF00557 Metallopeptidase family M24 BM524_14555 PF05221 S-adenosyl-L-homocysteine hydrolase BM524_14555 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BM524_14560 PF00072 Response regulator receiver domain BM524_14560 PF00990 Diguanylate cyclase, GGDEF domain BM524_14565 PF03547 Membrane transport protein BM524_14570 PF07940 Heparinase II/III-like protein BM524_14570 PF05426 Alginate lyase BM524_14575 PF13419 Haloacid dehalogenase-like hydrolase BM524_14580 PF08402 TOBE domain BM524_14580 PF00005 ABC transporter BM524_14585 PF00528 Binding-protein-dependent transport system inner membrane component BM524_14590 PF00528 Binding-protein-dependent transport system inner membrane component BM524_14605 PF12697 Alpha/beta hydrolase family BM524_14610 PF13360 PQQ-like domain BM524_14610 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BM524_14635 PF00005 ABC transporter BM524_14645 PF00883 Cytosol aminopeptidase family, catalytic domain BM524_14645 PF02789 Cytosol aminopeptidase family, N-terminal domain BM524_14650 PF12706 Beta-lactamase superfamily domain BM524_14655 PF03070 TENA/THI-4/PQQC family BM524_14660 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BM524_14665 PF13186 Iron-sulfur cluster-binding domain BM524_14665 PF04055 Radical SAM superfamily BM524_14690 PF00196 Bacterial regulatory proteins, luxR family BM524_14690 PF00072 Response regulator receiver domain BM524_14695 PF00512 His Kinase A (phospho-acceptor) domain BM524_14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_14705 PF12801 4Fe-4S binding domain BM524_14705 PF04205 FMN-binding domain BM524_14710 PF00171 Aldehyde dehydrogenase family BM524_14715 PF00072 Response regulator receiver domain BM524_14715 PF00196 Bacterial regulatory proteins, luxR family BM524_14720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_14720 PF05231 MASE1 BM524_14720 PF07730 Histidine kinase BM524_14725 PF03466 LysR substrate binding domain BM524_14725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_14730 PF00171 Aldehyde dehydrogenase family BM524_14735 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BM524_14735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM524_14740 PF02028 BCCT, betaine/carnitine/choline family transporter BM524_14745 PF01565 FAD binding domain BM524_14745 PF09330 D-lactate dehydrogenase, membrane binding BM524_14750 PF00196 Bacterial regulatory proteins, luxR family BM524_14755 PF03783 Curli production assembly/transport component CsgG BM524_14780 PF00082 Subtilase family BM524_14785 PF00196 Bacterial regulatory proteins, luxR family BM524_14785 PF00072 Response regulator receiver domain BM524_14790 PF07730 Histidine kinase BM524_14790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_14795 PF00106 short chain dehydrogenase BM524_14810 PF00271 Helicase conserved C-terminal domain BM524_14810 PF00270 DEAD/DEAH box helicase BM524_14815 PF00990 Diguanylate cyclase, GGDEF domain BM524_14815 PF00563 EAL domain BM524_14815 PF08448 PAS fold BM524_14815 PF08447 PAS fold BM524_14830 PF01081 KDPG and KHG aldolase BM524_14835 PF00294 pfkB family carbohydrate kinase BM524_14840 PF14592 Chondroitinase B BM524_14845 PF07729 FCD domain BM524_14845 PF00392 Bacterial regulatory proteins, gntR family BM524_14850 PF00924 Mechanosensitive ion channel BM524_14850 PF12795 Mechanosensitive ion channel porin domain BM524_14850 PF12794 Mechanosensitive ion channel inner membrane domain 1 BM524_14860 PF00141 Peroxidase BM524_14880 PF03466 LysR substrate binding domain BM524_14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_14890 PF01925 Sulfite exporter TauE/SafE BM524_14900 PF00072 Response regulator receiver domain BM524_14900 PF08769 Sporulation initiation factor Spo0A C terminal BM524_14910 PF00512 His Kinase A (phospho-acceptor) domain BM524_14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_14920 PF03104 DNA polymerase family B, exonuclease domain BM524_14920 PF00136 DNA polymerase family B BM524_14930 PF13193 AMP-binding enzyme C-terminal domain BM524_14930 PF00501 AMP-binding enzyme BM524_14970 PF05958 tRNA (Uracil-5-)-methyltransferase BM524_14975 PF00440 Bacterial regulatory proteins, tetR family BM524_14985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM524_14985 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_14995 PF03167 Uracil DNA glycosylase superfamily BM524_15000 PF03707 Bacterial signalling protein N terminal repeat BM524_15000 PF00563 EAL domain BM524_15000 PF00990 Diguanylate cyclase, GGDEF domain BM524_15010 PF01507 Phosphoadenosine phosphosulfate reductase family BM524_15015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BM524_15015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BM524_15020 PF00667 FAD binding domain BM524_15020 PF00175 Oxidoreductase NAD-binding domain BM524_15020 PF00258 Flavodoxin BM524_15040 PF04024 PspC domain BM524_15045 PF04012 PspA/IM30 family BM524_15055 PF01207 Dihydrouridine synthase (Dus) BM524_15060 PF00589 Phage integrase family BM524_15065 PF00589 Phage integrase family BM524_15120 PF00271 Helicase conserved C-terminal domain BM524_15120 PF04851 Type III restriction enzyme, res subunit BM524_15120 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BM524_15120 PF08463 EcoEI R protein C-terminal BM524_15125 PF01420 Type I restriction modification DNA specificity domain BM524_15130 PF12161 HsdM N-terminal domain BM524_15130 PF02384 N-6 DNA Methylase BM524_15185 PF02435 Levansucrase/Invertase BM524_15190 PF00251 Glycosyl hydrolases family 32 N-terminal domain BM524_15190 PF08244 Glycosyl hydrolases family 32 C terminal BM524_15200 PF00691 OmpA family BM524_15200 PF01389 OmpA-like transmembrane domain BM524_15205 PF02190 ATP-dependent protease La (LON) substrate-binding domain BM524_15205 PF00004 ATPase family associated with various cellular activities (AAA) BM524_15205 PF05362 Lon protease (S16) C-terminal proteolytic domain BM524_15210 PF00563 EAL domain BM524_15210 PF00990 Diguanylate cyclase, GGDEF domain BM524_15210 PF03707 Bacterial signalling protein N terminal repeat BM524_15215 PF00756 Putative esterase BM524_15220 PF01553 Acyltransferase BM524_15225 PF01553 Acyltransferase BM524_15230 PF00924 Mechanosensitive ion channel BM524_15245 PF01370 NAD dependent epimerase/dehydratase family BM524_15250 PF00209 Sodium:neurotransmitter symporter family BM524_15255 PF00106 short chain dehydrogenase BM524_15265 PF01625 Peptide methionine sulfoxide reductase BM524_15280 PF00258 Flavodoxin BM524_15290 PF02472 Biopolymer transport protein ExbD/TolR BM524_15305 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BM524_15305 PF13181 Tetratricopeptide repeat BM524_15310 PF01270 Glycosyl hydrolases family 8 BM524_15320 PF07238 PilZ domain BM524_15320 PF03552 Cellulose synthase BM524_15320 PF00535 Glycosyl transferase family 2 BM524_15335 PF05175 Methyltransferase small domain BM524_15340 PF13460 NAD(P)H-binding BM524_15345 PF00326 Prolyl oligopeptidase family BM524_15345 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BM524_15355 PF08000 Bacterial PH domain BM524_15360 PF00563 EAL domain BM524_15360 PF08448 PAS fold BM524_15360 PF00990 Diguanylate cyclase, GGDEF domain BM524_15365 PF00291 Pyridoxal-phosphate dependent enzyme BM524_15370 PF07969 Amidohydrolase family BM524_15380 PF00753 Metallo-beta-lactamase superfamily BM524_15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_15390 PF03466 LysR substrate binding domain BM524_15395 PF13230 Glutamine amidotransferases class-II BM524_15405 PF05360 yiaA/B two helix domain BM524_15440 PF09905 DNA-binding protein VF530 BM524_15445 PF00753 Metallo-beta-lactamase superfamily BM524_15445 PF16123 Hydroxyacylglutathione hydrolase C-terminus BM524_15455 PF11798 IMS family HHH motif BM524_15455 PF00817 impB/mucB/samB family BM524_15455 PF11799 impB/mucB/samB family C-terminal domain BM524_15470 PF02424 ApbE family BM524_15475 PF00175 Oxidoreductase NAD-binding domain BM524_15475 PF00111 2Fe-2S iron-sulfur cluster binding domain BM524_15475 PF00970 Oxidoreductase FAD-binding domain BM524_15480 PF02508 Rnf-Nqr subunit, membrane protein BM524_15485 PF02508 Rnf-Nqr subunit, membrane protein BM524_15490 PF04205 FMN-binding domain BM524_15495 PF03116 NQR2, RnfD, RnfE family BM524_15500 PF11973 NQRA C-terminal domain BM524_15500 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BM524_15505 PF12241 Trans-2-enoyl-CoA reductase catalytic region BM524_15505 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BM524_15505 PF07055 Enoyl reductase FAD binding domain BM524_15510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BM524_15510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM524_15515 PF00311 Phosphoenolpyruvate carboxylase BM524_15520 PF00141 Peroxidase BM524_15530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BM524_15530 PF00056 lactate/malate dehydrogenase, NAD binding domain BM524_15535 PF01316 Arginine repressor, DNA binding domain BM524_15535 PF02863 Arginine repressor, C-terminal domain BM524_15560 PF00485 Phosphoribulokinase / Uridine kinase family BM524_15565 PF07670 Nucleoside recognition BM524_15565 PF07662 Na+ dependent nucleoside transporter C-terminus BM524_15565 PF01773 Na+ dependent nucleoside transporter N-terminus BM524_15585 PF00072 Response regulator receiver domain BM524_15585 PF00990 Diguanylate cyclase, GGDEF domain BM524_15590 PF02811 PHP domain BM524_15590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM524_15590 PF14579 Helix-hairpin-helix motif BM524_15590 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM524_15590 PF00929 Exonuclease BM524_15595 PF00571 CBS domain BM524_15600 PF00474 Sodium:solute symporter family BM524_15610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_15610 PF00512 His Kinase A (phospho-acceptor) domain BM524_15610 PF07689 KaiB domain BM524_15620 PF18030 RimK PreATP-grasp domain BM524_15620 PF08443 RimK-like ATP-grasp domain BM524_15630 PF18030 RimK PreATP-grasp domain BM524_15630 PF08443 RimK-like ATP-grasp domain BM524_15640 PF00196 Bacterial regulatory proteins, luxR family BM524_15640 PF00072 Response regulator receiver domain BM524_15655 PF02690 Na+/Pi-cotransporter BM524_15660 PF00248 Aldo/keto reductase family BM524_15670 PF00082 Subtilase family BM524_15685 PF03793 PASTA domain BM524_15685 PF00069 Protein kinase domain BM524_15690 PF17200 Single Cache domain 2 BM524_15690 PF07730 Histidine kinase BM524_15695 PF00196 Bacterial regulatory proteins, luxR family BM524_15695 PF00072 Response regulator receiver domain BM524_15700 PF00082 Subtilase family BM524_15725 PF16655 PhoD-like phosphatase, N-terminal domain BM524_15725 PF09423 PhoD-like phosphatase BM524_15735 PF06628 Catalase-related immune-responsive BM524_15735 PF00199 Catalase BM524_15745 PF03144 Elongation factor Tu domain 2 BM524_15745 PF03143 Elongation factor Tu C-terminal domain BM524_15745 PF00009 Elongation factor Tu GTP binding domain BM524_15770 PF03309 Type III pantothenate kinase BM524_15775 PF08279 HTH domain BM524_15775 PF02237 Biotin protein ligase C terminal domain BM524_15775 PF03099 Biotin/lipoate A/B protein ligase family BM524_15780 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BM524_15780 PF01565 FAD binding domain BM524_15785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_15785 PF13426 PAS domain BM524_15785 PF08447 PAS fold BM524_15825 PF03412 Peptidase C39 family BM524_15825 PF00664 ABC transporter transmembrane region BM524_15825 PF00005 ABC transporter BM524_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_15830 PF03466 LysR substrate binding domain BM524_15850 PF00483 Nucleotidyl transferase BM524_15850 PF01050 Mannose-6-phosphate isomerase BM524_15855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BM524_15855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BM524_15855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BM524_15860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM524_15860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM524_15860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM524_15860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM524_15865 PF01380 SIS domain BM524_15875 PF02719 Polysaccharide biosynthesis protein BM524_15880 PF02397 Bacterial sugar transferase BM524_15885 PF01370 NAD dependent epimerase/dehydratase family BM524_15900 PF00107 Zinc-binding dehydrogenase BM524_15910 PF01757 Acyltransferase family BM524_15930 PF01943 Polysaccharide biosynthesis protein BM524_15935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM524_15940 PF00132 Bacterial transferase hexapeptide (six repeats) BM524_15945 PF05523 WxcM-like, C-terminal BM524_15950 PF00483 Nucleotidyl transferase BM524_15955 PF16363 GDP-mannose 4,6 dehydratase BM524_15960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BM524_15960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BM524_15960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BM524_15965 PF02350 UDP-N-acetylglucosamine 2-epimerase BM524_15980 PF07196 Flagellin hook IN motif BM524_15980 PF00700 Bacterial flagellin C-terminal helical region BM524_15980 PF00669 Bacterial flagellin N-terminal helical region BM524_15990 PF01196 Ribosomal protein L17 BM524_15995 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BM524_15995 PF01000 RNA polymerase Rpb3/RpoA insert domain BM524_15995 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BM524_16000 PF01479 S4 domain BM524_16000 PF00163 Ribosomal protein S4/S9 N-terminal domain BM524_16005 PF00411 Ribosomal protein S11 BM524_16010 PF00416 Ribosomal protein S13/S18 BM524_16015 PF00444 Ribosomal protein L36 BM524_16020 PF00344 SecY translocase BM524_16025 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BM524_16030 PF00327 Ribosomal protein L30p/L7e BM524_16035 PF00333 Ribosomal protein S5, N-terminal domain BM524_16035 PF03719 Ribosomal protein S5, C-terminal domain BM524_16040 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BM524_16045 PF00347 Ribosomal protein L6 BM524_16050 PF00410 Ribosomal protein S8 BM524_16055 PF00253 Ribosomal protein S14p/S29e BM524_16060 PF00281 Ribosomal protein L5 BM524_16060 PF00673 ribosomal L5P family C-terminus BM524_16065 PF00467 KOW motif BM524_16065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BM524_16070 PF00238 Ribosomal protein L14p/L23e BM524_16075 PF00512 His Kinase A (phospho-acceptor) domain BM524_16075 PF09308 LuxQ, periplasmic BM524_16075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_16075 PF00072 Response regulator receiver domain BM524_16090 PF08032 RNA 2'-O ribose methyltransferase substrate binding BM524_16090 PF00588 SpoU rRNA Methylase family BM524_16095 PF00773 RNB domain BM524_16095 PF08461 Ribonuclease R winged-helix domain BM524_16095 PF00575 S1 RNA binding domain BM524_16095 PF17876 Cold shock domain BM524_16095 PF08206 Ribonuclease B OB domain BM524_16110 PF09423 PhoD-like phosphatase BM524_16110 PF16655 PhoD-like phosphatase, N-terminal domain BM524_16130 PF08238 Sel1 repeat BM524_16140 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BM524_16145 PF00970 Oxidoreductase FAD-binding domain BM524_16145 PF00175 Oxidoreductase NAD-binding domain BM524_16155 PF04389 Peptidase family M28 BM524_16165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_16165 PF01590 GAF domain BM524_16165 PF00360 Phytochrome region BM524_16165 PF00512 His Kinase A (phospho-acceptor) domain BM524_16165 PF08446 PAS fold BM524_16175 PF01654 Cytochrome bd terminal oxidase subunit I BM524_16180 PF02322 Cytochrome bd terminal oxidase subunit II BM524_16185 PF13404 AsnC-type helix-turn-helix domain BM524_16185 PF01037 Lrp/AsnC ligand binding domain BM524_16195 PF00313 'Cold-shock' DNA-binding domain BM524_16200 PF03109 ABC1 family BM524_16210 PF01209 ubiE/COQ5 methyltransferase family BM524_16220 PF01432 Peptidase family M3 BM524_16225 PF00072 Response regulator receiver domain BM524_16235 PF00989 PAS fold BM524_16235 PF00512 His Kinase A (phospho-acceptor) domain BM524_16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_16240 PF00072 Response regulator receiver domain BM524_16240 PF02954 Bacterial regulatory protein, Fis family BM524_16240 PF00158 Sigma-54 interaction domain BM524_16245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM524_16245 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_16250 PF00384 Molybdopterin oxidoreductase BM524_16250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BM524_16250 PF01568 Molydopterin dinucleotide binding domain BM524_16255 PF07676 WD40-like Beta Propeller Repeat BM524_16255 PF00326 Prolyl oligopeptidase family BM524_16305 PF03412 Peptidase C39 family BM524_16305 PF00005 ABC transporter BM524_16305 PF00664 ABC transporter transmembrane region BM524_16310 PF00072 Response regulator receiver domain BM524_16310 PF00196 Bacterial regulatory proteins, luxR family BM524_16330 PF00356 Bacterial regulatory proteins, lacI family BM524_16335 PF01306 LacY proton/sugar symporter BM524_16340 PF00251 Glycosyl hydrolases family 32 N-terminal domain BM524_16340 PF08244 Glycosyl hydrolases family 32 C terminal BM524_16345 PF00083 Sugar (and other) transporter BM524_16355 PF00593 TonB dependent receptor BM524_16355 PF07715 TonB-dependent Receptor Plug Domain BM524_16360 PF07724 AAA domain (Cdc48 subfamily) BM524_16360 PF00004 ATPase family associated with various cellular activities (AAA) BM524_16365 PF00227 Proteasome subunit BM524_16370 PF00313 'Cold-shock' DNA-binding domain BM524_16375 PF05036 Sporulation related domain BM524_16380 PF00270 DEAD/DEAH box helicase BM524_16380 PF00271 Helicase conserved C-terminal domain BM524_16380 PF17764 3′ DNA-binding domain (3′BD) BM524_16380 PF18074 Primosomal protein N C-terminal domain BM524_16380 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BM524_16385 PF01197 Ribosomal protein L31 BM524_16395 PF00390 Malic enzyme, N-terminal domain BM524_16395 PF03949 Malic enzyme, NAD binding domain BM524_16400 PF01340 Met Apo-repressor, MetJ BM524_16405 PF02219 Methylenetetrahydrofolate reductase BM524_16410 PF03631 Virulence factor BrkB BM524_16425 PF00561 alpha/beta hydrolase fold BM524_16430 PF02580 D-Tyr-tRNA(Tyr) deacylase BM524_16435 PF00583 Acetyltransferase (GNAT) family BM524_16435 PF09500 Putative thioesterase (yiiD_Cterm) BM524_16440 PF04545 Sigma-70, region 4 BM524_16440 PF04542 Sigma-70 region 2 BM524_16440 PF00140 Sigma-70 factor, region 1.2 BM524_16445 PF08668 HDOD domain BM524_16445 PF00563 EAL domain BM524_16450 PF00563 EAL domain BM524_16450 PF08668 HDOD domain BM524_16455 PF18075 FtsX extracellular domain BM524_16460 PF00005 ABC transporter BM524_16465 PF00448 SRP54-type protein, GTPase domain BM524_16465 PF02881 SRP54-type protein, helical bundle domain BM524_16485 PF01914 MarC family integral membrane protein BM524_16495 PF12404 Peptidase BM524_16495 PF00883 Cytosol aminopeptidase family, catalytic domain BM524_16505 PF17746 SfsA N-terminal OB domain BM524_16505 PF03749 Sugar fermentation stimulation protein RE domain BM524_16510 PF01258 Prokaryotic dksA/traR C4-type zinc finger BM524_16515 PF00749 tRNA synthetases class I (E and Q), catalytic domain BM524_16520 PF12627 Probable RNA and SrmB- binding site of polymerase A BM524_16520 PF12626 Polymerase A arginine-rich C-terminus BM524_16520 PF01743 Poly A polymerase head domain BM524_16525 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BM524_16530 PF02548 Ketopantoate hydroxymethyltransferase BM524_16535 PF02569 Pantoate-beta-alanine ligase BM524_16540 PF00282 Pyridoxal-dependent decarboxylase conserved domain BM524_16555 PF01061 ABC-2 type transporter BM524_16560 PF00005 ABC transporter BM524_16565 PF00486 Transcriptional regulatory protein, C terminal BM524_16565 PF00072 Response regulator receiver domain BM524_16570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_16570 PF00672 HAMP domain BM524_16570 PF00512 His Kinase A (phospho-acceptor) domain BM524_16575 PF00593 TonB dependent receptor BM524_16575 PF07715 TonB-dependent Receptor Plug Domain BM524_16580 PF18331 PKHD-type hydroxylase C-terminal domain BM524_16580 PF13640 2OG-Fe(II) oxygenase superfamily BM524_16595 PF01595 Cyclin M transmembrane N-terminal domain BM524_16595 PF00571 CBS domain BM524_16605 PF02554 Carbon starvation protein CstA BM524_16605 PF13722 5TM C-terminal transporter carbon starvation CstA BM524_16625 PF00009 Elongation factor Tu GTP binding domain BM524_16625 PF03144 Elongation factor Tu domain 2 BM524_16625 PF03143 Elongation factor Tu C-terminal domain BM524_16630 PF03764 Elongation factor G, domain IV BM524_16630 PF14492 Elongation Factor G, domain II BM524_16630 PF00679 Elongation factor G C-terminus BM524_16630 PF03144 Elongation factor Tu domain 2 BM524_16630 PF00009 Elongation factor Tu GTP binding domain BM524_16635 PF00177 Ribosomal protein S7p/S5e BM524_16640 PF00164 Ribosomal protein S12/S23 BM524_16645 PF05000 RNA polymerase Rpb1, domain 4 BM524_16645 PF04983 RNA polymerase Rpb1, domain 3 BM524_16645 PF00623 RNA polymerase Rpb1, domain 2 BM524_16645 PF04997 RNA polymerase Rpb1, domain 1 BM524_16645 PF04998 RNA polymerase Rpb1, domain 5 BM524_16650 PF04560 RNA polymerase Rpb2, domain 7 BM524_16650 PF00562 RNA polymerase Rpb2, domain 6 BM524_16650 PF10385 RNA polymerase beta subunit external 1 domain BM524_16650 PF04565 RNA polymerase Rpb2, domain 3 BM524_16650 PF04561 RNA polymerase Rpb2, domain 2 BM524_16650 PF04563 RNA polymerase beta subunit BM524_16655 PF00542 Ribosomal protein L7/L12 C-terminal domain BM524_16655 PF16320 Ribosomal protein L7/L12 dimerisation domain BM524_16660 PF00466 Ribosomal protein L10 BM524_16665 PF00687 Ribosomal protein L1p/L10e family BM524_16670 PF03946 Ribosomal protein L11, N-terminal domain BM524_16670 PF00298 Ribosomal protein L11, RNA binding domain BM524_16690 PF00467 KOW motif BM524_16690 PF02357 Transcription termination factor nusG BM524_16695 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BM524_16705 PF00005 ABC transporter BM524_16705 PF00664 ABC transporter transmembrane region BM524_16710 PF03737 Aldolase/RraA BM524_16715 PF05649 Peptidase family M13 BM524_16715 PF01431 Peptidase family M13 BM524_16725 PF00271 Helicase conserved C-terminal domain BM524_16725 PF03880 DbpA RNA binding domain BM524_16725 PF00270 DEAD/DEAH box helicase BM524_16730 PF01979 Amidohydrolase family BM524_16735 PF08212 Lipocalin-like domain BM524_16740 PF00248 Aldo/keto reductase family BM524_16745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM524_16750 PF00924 Mechanosensitive ion channel BM524_16750 PF05552 Conserved TM helix BM524_16755 PF07690 Major Facilitator Superfamily BM524_16760 PF00128 Alpha amylase, catalytic domain BM524_16770 PF01227 GTP cyclohydrolase I BM524_16780 PF04371 Porphyromonas-type peptidyl-arginine deiminase BM524_16785 PF00795 Carbon-nitrogen hydrolase BM524_16795 PF00271 Helicase conserved C-terminal domain BM524_16795 PF00270 DEAD/DEAH box helicase BM524_16795 PF08494 DEAD/H associated BM524_16805 PF04679 ATP dependent DNA ligase C terminal region BM524_16805 PF01068 ATP dependent DNA ligase domain BM524_16805 PF04675 DNA ligase N terminus BM524_16810 PF09285 Elongation factor P, C-terminal BM524_16810 PF08207 Elongation factor P (EF-P) KOW-like domain BM524_16810 PF01132 Elongation factor P (EF-P) OB domain BM524_16815 PF00294 pfkB family carbohydrate kinase BM524_16830 PF02798 Glutathione S-transferase, N-terminal domain BM524_16830 PF00043 Glutathione S-transferase, C-terminal domain BM524_16835 PF02798 Glutathione S-transferase, N-terminal domain BM524_16845 PF00561 alpha/beta hydrolase fold BM524_16860 PF00171 Aldehyde dehydrogenase family BM524_16865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BM524_16865 PF00205 Thiamine pyrophosphate enzyme, central domain BM524_16865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BM524_16875 PF00762 Ferrochelatase BM524_16880 PF03806 AbgT putative transporter family BM524_16885 PF01145 SPFH domain / Band 7 family BM524_16890 PF12221 Bacterial membrane protein N terminal BM524_16890 PF01145 SPFH domain / Band 7 family BM524_16895 PF01926 50S ribosome-binding GTPase BM524_16895 PF13167 GTP-binding GTPase N-terminal BM524_16895 PF16360 GTP-binding GTPase Middle Region BM524_16900 PF17209 Hfq protein BM524_16910 PF08676 MutL C terminal dimerisation domain BM524_16910 PF01119 DNA mismatch repair protein, C-terminal domain BM524_16915 PF01520 N-acetylmuramoyl-L-alanine amidase BM524_16920 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BM524_16925 PF01256 Carbohydrate kinase BM524_16925 PF03853 YjeF-related protein N-terminus BM524_16930 PF08331 Domain of unknown function (DUF1730) BM524_16940 PF01208 Uroporphyrinogen decarboxylase (URO-D) BM524_16945 PF09297 NADH pyrophosphatase zinc ribbon domain BM524_16945 PF00293 NUDIX domain BM524_16950 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BM524_16955 PF01475 Ferric uptake regulator family BM524_16965 PF01894 Uncharacterised protein family UPF0047 BM524_16970 PF05736 OprF membrane domain BM524_16970 PF00691 OmpA family BM524_16975 PF03796 DnaB-like helicase C terminal domain BM524_16975 PF00772 DnaB-like helicase N terminal domain BM524_17000 PF03473 MOSC domain BM524_17000 PF03475 3-alpha domain BM524_17015 PF00486 Transcriptional regulatory protein, C terminal BM524_17015 PF00072 Response regulator receiver domain BM524_17020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_17020 PF16750 Sensor domain of 2-component histidine kinase BM524_17020 PF00512 His Kinase A (phospho-acceptor) domain BM524_17020 PF00672 HAMP domain BM524_17040 PF00873 AcrB/AcrD/AcrF family BM524_17045 PF01281 Ribosomal protein L9, N-terminal domain BM524_17045 PF03948 Ribosomal protein L9, C-terminal domain BM524_17050 PF01084 Ribosomal protein S18 BM524_17055 PF01250 Ribosomal protein S6 BM524_17060 PF00672 HAMP domain BM524_17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_17060 PF00512 His Kinase A (phospho-acceptor) domain BM524_17060 PF01627 Hpt domain BM524_17060 PF00072 Response regulator receiver domain BM524_17070 PF00005 ABC transporter BM524_17070 PF12704 MacB-like periplasmic core domain BM524_17070 PF02687 FtsX-like permease family BM524_17080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_17080 PF08447 PAS fold BM524_17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_17085 PF00989 PAS fold BM524_17085 PF00512 His Kinase A (phospho-acceptor) domain BM524_17085 PF13188 PAS domain BM524_17085 PF13426 PAS domain BM524_17090 PF02743 Cache domain BM524_17090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM524_17090 PF00672 HAMP domain BM524_17105 PF03601 Conserved hypothetical protein 698 BM524_17110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BM524_17115 PF00248 Aldo/keto reductase family BM524_17135 PF00474 Sodium:solute symporter family BM524_17140 PF00593 TonB dependent receptor BM524_17140 PF07715 TonB-dependent Receptor Plug Domain BM524_17145 PF16916 Dimerisation domain of Zinc Transporter BM524_17145 PF01545 Cation efflux family BM524_17150 PF00722 Glycosyl hydrolases family 16 BM524_17165 PF01915 Glycosyl hydrolase family 3 C-terminal domain BM524_17165 PF00933 Glycosyl hydrolase family 3 N terminal domain BM524_17165 PF14310 Fibronectin type III-like domain BM524_17170 PF07690 Major Facilitator Superfamily BM524_17175 PF00232 Glycosyl hydrolase family 1 BM524_17180 PF00356 Bacterial regulatory proteins, lacI family BM524_17185 PF00083 Sugar (and other) transporter BM524_17190 PF00664 ABC transporter transmembrane region BM524_17190 PF00005 ABC transporter BM524_17195 PF00664 ABC transporter transmembrane region BM524_17195 PF00005 ABC transporter BM524_17200 PF08173 Membrane bound YbgT-like protein BM524_17205 PF02322 Cytochrome bd terminal oxidase subunit II BM524_17210 PF01654 Cytochrome bd terminal oxidase subunit I BM524_17220 PF02954 Bacterial regulatory protein, Fis family BM524_17220 PF00158 Sigma-54 interaction domain BM524_17220 PF00072 Response regulator receiver domain BM524_17245 PF13474 SnoaL-like domain BM524_17255 PF00990 Diguanylate cyclase, GGDEF domain BM524_17255 PF17151 Periplasmic sensor domain BM524_17265 PF08021 Siderophore-interacting FAD-binding domain BM524_17265 PF04954 Siderophore-interacting protein BM524_17270 PF05532 CsbD-like BM524_17285 PF04542 Sigma-70 region 2 BM524_17285 PF08281 Sigma-70, region 4 BM524_17290 PF05922 Peptidase inhibitor I9 BM524_17290 PF00082 Subtilase family BM524_17310 PF00472 RF-1 domain BM524_17315 PF00561 alpha/beta hydrolase fold BM524_17315 PF00364 Biotin-requiring enzyme BM524_17335 PF01292 Prokaryotic cytochrome b561 BM524_17340 PF04264 YceI-like domain BM524_17345 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM524_17350 PF07715 TonB-dependent Receptor Plug Domain BM524_17350 PF00593 TonB dependent receptor BM524_17360 PF03466 LysR substrate binding domain BM524_17360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_17365 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BM524_17370 PF00107 Zinc-binding dehydrogenase BM524_17370 PF16884 N-terminal domain of oxidoreductase BM524_17375 PF00990 Diguanylate cyclase, GGDEF domain BM524_17375 PF00563 EAL domain BM524_17375 PF00360 Phytochrome region BM524_17375 PF01590 GAF domain BM524_17380 PF09308 LuxQ, periplasmic BM524_17380 PF00512 His Kinase A (phospho-acceptor) domain BM524_17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_17380 PF00072 Response regulator receiver domain BM524_17390 PF00296 Luciferase-like monooxygenase BM524_17395 PF01380 SIS domain BM524_17400 PF00455 DeoR C terminal sensor domain BM524_17400 PF08220 DeoR-like helix-turn-helix domain BM524_17405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM524_17405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM524_17410 PF00132 Bacterial transferase hexapeptide (six repeats) BM524_17410 PF14602 Hexapeptide repeat of succinyl-transferase BM524_17410 PF12804 MobA-like NTP transferase domain BM524_17420 PF00892 EamA-like transporter family BM524_17425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BM524_17425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BM524_17430 PF00730 HhH-GPD superfamily base excision DNA repair protein BM524_17430 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BM524_17435 PF00144 Beta-lactamase BM524_17440 PF17810 Arginine decarboxylase helical bundle domain BM524_17440 PF17944 Arginine decarboxylase C-terminal helical extension BM524_17440 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BM524_17450 PF02233 NAD(P) transhydrogenase beta subunit BM524_17455 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BM524_17460 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BM524_17460 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BM524_17535 PF00544 Pectate lyase BM524_17540 PF00118 TCP-1/cpn60 chaperonin family BM524_17545 PF00166 Chaperonin 10 Kd subunit BM524_17550 PF04186 FxsA cytoplasmic membrane protein BM524_17555 PF03091 CutA1 divalent ion tolerance protein BM524_17560 PF11412 Disulphide bond corrector protein DsbC BM524_17560 PF02683 Cytochrome C biogenesis protein transmembrane region BM524_17565 PF01551 Peptidase family M23 BM524_17570 PF01220 Dehydroquinase class II BM524_17575 PF00364 Biotin-requiring enzyme BM524_17580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BM524_17580 PF02785 Biotin carboxylase C-terminal domain BM524_17580 PF00289 Biotin carboxylase, N-terminal domain BM524_17600 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM524_17600 PF11490 DNA polymerase III polC-type N-terminus II BM524_17600 PF14579 Helix-hairpin-helix motif BM524_17600 PF02811 PHP domain BM524_17600 PF00929 Exonuclease BM524_17600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM524_17620 PF01355 High potential iron-sulfur protein BM524_17625 PF01425 Amidase BM524_17640 PF01207 Dihydrouridine synthase (Dus) BM524_17645 PF02954 Bacterial regulatory protein, Fis family BM524_17650 PF01808 AICARFT/IMPCHase bienzyme BM524_17650 PF02142 MGS-like domain BM524_17660 PF02843 Phosphoribosylglycinamide synthetase, C domain BM524_17660 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BM524_17660 PF02844 Phosphoribosylglycinamide synthetase, N domain BM524_17680 PF00520 Ion transport protein BM524_17680 PF00027 Cyclic nucleotide-binding domain BM524_17685 PF00485 Phosphoribulokinase / Uridine kinase family BM524_17695 PF00072 Response regulator receiver domain BM524_17695 PF00486 Transcriptional regulatory protein, C terminal BM524_17700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_17700 PF00672 HAMP domain BM524_17700 PF00512 His Kinase A (phospho-acceptor) domain BM524_17710 PF13802 Galactose mutarotase-like BM524_17710 PF17137 Domain of unknown function (DUF5110) BM524_17710 PF16338 Domain of unknown function (DUF4968) BM524_17710 PF01055 Glycosyl hydrolases family 31 BM524_17720 PF01430 Hsp33 protein BM524_17725 PF01479 S4 domain BM524_17730 PF11356 Type II secretion system protein C BM524_17735 PF00263 Bacterial type II and III secretion system protein BM524_17735 PF03958 Bacterial type II/III secretion system short domain BM524_17740 PF00437 Type II/IV secretion system protein BM524_17745 PF00482 Type II secretion system (T2SS), protein F BM524_17750 PF07963 Prokaryotic N-terminal methylation motif BM524_17750 PF08334 Type II secretion system (T2SS), protein G BM524_17755 PF12019 Type II transport protein GspH BM524_17760 PF07963 Prokaryotic N-terminal methylation motif BM524_17760 PF02501 Type II secretion system (T2SS), protein I BM524_17765 PF07963 Prokaryotic N-terminal methylation motif BM524_17765 PF11612 Type II secretion system (T2SS), protein J BM524_17775 PF05134 Type II secretion system (T2SS), protein L BM524_17775 PF12693 GspL periplasmic domain BM524_17780 PF04612 Type II secretion system (T2SS), protein M BM524_17800 PF00171 Aldehyde dehydrogenase family BM524_17805 PF01931 Protein of unknown function DUF84 BM524_17810 PF13419 Haloacid dehalogenase-like hydrolase BM524_17815 PF00293 NUDIX domain BM524_17820 PF00459 Inositol monophosphatase family BM524_17835 PF04349 Periplasmic glucan biosynthesis protein, MdoG BM524_17845 PF06794 Uncharacterised protein family (UPF0270) BM524_17850 PF00561 alpha/beta hydrolase fold BM524_17860 PF00005 ABC transporter BM524_17860 PF12848 ABC transporter BM524_17875 PF04102 SlyX BM524_17885 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BM524_17885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM524_17895 PF03449 Transcription elongation factor, N-terminal BM524_17895 PF01272 Transcription elongation factor, GreA/GreB, C-term BM524_17900 PF00575 S1 RNA binding domain BM524_17900 PF09371 Tex-like protein N-terminal domain BM524_17900 PF17674 HHH domain BM524_17900 PF16921 Tex protein YqgF-like domain BM524_17920 PF00561 alpha/beta hydrolase fold BM524_17925 PF00156 Phosphoribosyl transferase domain BM524_17935 PF01521 Iron-sulphur cluster biosynthesis BM524_17935 PF01106 NifU-like domain BM524_17945 PF01177 Asp/Glu/Hydantoin racemase BM524_17960 PF01554 MatE BM524_17965 PF14883 Hypothetical glycosyl hydrolase family 13 BM524_17965 PF01522 Polysaccharide deacetylase BM524_17975 PF02630 SCO1/SenC BM524_17980 PF01040 UbiA prenyltransferase family BM524_17985 PF02628 Cytochrome oxidase assembly protein BM524_18005 PF00510 Cytochrome c oxidase subunit III BM524_18010 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BM524_18015 PF00115 Cytochrome C and Quinol oxidase polypeptide I BM524_18020 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BM524_18020 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BM524_18025 PF00717 Peptidase S24-like BM524_18025 PF01726 LexA DNA binding domain BM524_18030 PF00990 Diguanylate cyclase, GGDEF domain BM524_18030 PF17158 Membrane-associated sensor, integral membrane domain BM524_18035 PF01553 Acyltransferase BM524_18040 PF00291 Pyridoxal-phosphate dependent enzyme BM524_18040 PF00585 C-terminal regulatory domain of Threonine dehydratase BM524_18045 PF00920 Dehydratase family BM524_18050 PF03458 UPF0126 domain BM524_18055 PF13335 Magnesium chelatase, subunit ChlI C-terminal BM524_18055 PF01078 Magnesium chelatase, subunit ChlI BM524_18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM524_18060 PF03466 LysR substrate binding domain BM524_18065 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BM524_18065 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BM524_18070 PF07690 Major Facilitator Superfamily BM524_18075 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) BM524_18080 PF07244 Surface antigen variable number repeat BM524_18080 PF01103 Surface antigen BM524_18080 PF17243 POTRA domain TamA domain 1 BM524_18085 PF04357 TamB, inner membrane protein subunit of TAM complex BM524_18110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM524_18110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM524_18120 PF00696 Amino acid kinase family BM524_18120 PF01472 PUA domain BM524_18140 PF03109 ABC1 family BM524_18165 PF01979 Amidohydrolase family BM524_18190 PF01206 Sulfurtransferase TusA BM524_18195 PF00156 Phosphoribosyl transferase domain BM524_18200 PF01138 3' exoribonuclease family, domain 1 BM524_18200 PF03725 3' exoribonuclease family, domain 2 BM524_18205 PF03755 YicC-like family, N-terminal region BM524_18205 PF08340 Domain of unknown function (DUF1732) BM524_18250 PF04820 Tryptophan halogenase BM524_18265 PF00232 Glycosyl hydrolase family 1 BM524_18275 PF00356 Bacterial regulatory proteins, lacI family BM524_18285 PF05736 OprF membrane domain BM524_18285 PF00691 OmpA family BM524_18290 PF01966 HD domain BM524_18305 PF00043 Glutathione S-transferase, C-terminal domain BM524_18305 PF02798 Glutathione S-transferase, N-terminal domain BM524_18315 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BM524_18315 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BM524_18320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM524_18320 PF02874 ATP synthase alpha/beta family, beta-barrel domain BM524_18325 PF00231 ATP synthase BM524_18330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM524_18330 PF02874 ATP synthase alpha/beta family, beta-barrel domain BM524_18330 PF00306 ATP synthase alpha/beta chain, C terminal domain BM524_18335 PF00213 ATP synthase delta (OSCP) subunit BM524_18340 PF00430 ATP synthase B/B' CF(0) BM524_18345 PF00137 ATP synthase subunit C BM524_18350 PF00119 ATP synthase A chain BM524_18360 PF02195 ParB-like nuclease domain BM524_18360 PF17762 HTH domain found in ParB protein BM524_18365 PF13614 AAA domain BM524_18370 PF02527 rRNA small subunit methyltransferase G BM524_18375 PF01134 Glucose inhibited division protein A BM524_18375 PF13932 GidA associated domain BM524_18390 PF00258 Flavodoxin BM524_18395 PF12631 MnmE helical domain BM524_18395 PF01926 50S ribosome-binding GTPase BM524_18395 PF10396 GTP-binding protein TrmE N-terminus BM524_18400 PF04461 Protein of unknown function (DUF520) BM524_18405 PF14849 YidC periplasmic domain BM524_18405 PF02096 60Kd inner membrane protein BM524_18410 PF00825 Ribonuclease P BM524_18415 PF00468 Ribosomal protein L34 BM524_18440 PF01131 DNA topoisomerase BM524_18440 PF01396 Topoisomerase DNA binding C4 zinc finger BM524_18440 PF01751 Toprim domain BM524_18560 PF04546 Sigma-70, non-essential region BM524_18560 PF04539 Sigma-70 region 3 BM524_18560 PF04542 Sigma-70 region 2 BM524_18560 PF04545 Sigma-70, region 4 BM524_18560 PF03979 Sigma-70 factor, region 1.1 BM524_18560 PF00140 Sigma-70 factor, region 1.2 BM524_18625 PF00437 Type II/IV secretion system protein BM524_18625 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BM524_18655 PF00437 Type II/IV secretion system protein BM524_19160 PF05175 Methyltransferase small domain BM524_19160 PF08468 Methyltransferase small domain N-terminal BM524_19185 PF00145 C-5 cytosine-specific DNA methylase BM524_19250 PF01757 Acyltransferase family BM524_19370 PF01478 Type IV leader peptidase family BM524_19370 PF06750 Bacterial Peptidase A24 N-terminal domain BM524_19660 PF02675 S-adenosylmethionine decarboxylase BM524_19740 PF05736 OprF membrane domain BM524_19740 PF00691 OmpA family BM524_19765 PF05970 PIF1-like helicase BM524_19765 PF14493 Helix-turn-helix domain BM524_19775 PF00712 DNA polymerase III beta subunit, N-terminal domain BM524_19775 PF02767 DNA polymerase III beta subunit, central domain BM524_19775 PF02768 DNA polymerase III beta subunit, C-terminal domain BM524_19820 PF02683 Cytochrome C biogenesis protein transmembrane region BM524_19820 PF11412 Disulphide bond corrector protein DsbC BM524_19855 PF01555 DNA methylase BM524_19870 PF00303 Thymidylate synthase BM524_19900 PF04542 Sigma-70 region 2 BM524_19900 PF04545 Sigma-70, region 4 BM524_19920 PF00266 Aminotransferase class-V BM524_19925 PF02223 Thymidylate kinase BM524_19950 PF02599 Global regulator protein family BM524_19985 PF02867 Ribonucleotide reductase, barrel domain BM524_19985 PF00317 Ribonucleotide reductase, all-alpha domain BM524_19985 PF03477 ATP cone domain BM524_19990 PF00268 Ribonucleotide reductase, small chain BM524_19995 PF00268 Ribonucleotide reductase, small chain BM524_20050 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BM524_20050 PF18766 SWI2/SNF2 ATPase BM524_20050 PF11867 Domain of unknown function (DUF3387) BM524_20065 PF12161 HsdM N-terminal domain BM524_20065 PF02384 N-6 DNA Methylase BM524_20090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BM524_20100 PF14490 Helix-hairpin-helix containing domain BM524_20100 PF13538 UvrD-like helicase C-terminal domain BM524_20100 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BM524_20120 PF02899 Phage integrase, N-terminal SAM-like domain BM524_20120 PF00589 Phage integrase family BM524_20125 PF04542 Sigma-70 region 2 BM524_20125 PF04545 Sigma-70, region 4 BM524_20125 PF00140 Sigma-70 factor, region 1.2 BM524_20125 PF03979 Sigma-70 factor, region 1.1 BM524_20125 PF04539 Sigma-70 region 3 BM524_20140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM524_20140 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM524_20140 PF02811 PHP domain BM524_20140 PF14579 Helix-hairpin-helix motif BM524_20170 PF00990 Diguanylate cyclase, GGDEF domain BM524_20170 PF17151 Periplasmic sensor domain BM524_20190 PF01385 Probable transposase BM524_20190 PF12323 Helix-turn-helix domain BM524_20190 PF07282 Putative transposase DNA-binding domain BM524_20195 PF13361 UvrD-like helicase C-terminal domain BM524_20195 PF00580 UvrD/REP helicase N-terminal domain BM524_20215 PF00436 Single-strand binding protein family BM524_20245 PF00216 Bacterial DNA-binding protein BM524_20450 PF10544 T5orf172 domain BM524_20470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM524_20515 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BM524_20515 PF12826 Helix-hairpin-helix motif BM524_20515 PF00533 BRCA1 C Terminus (BRCT) domain BM524_20515 PF01653 NAD-dependent DNA ligase adenylation domain BM524_20515 PF03120 NAD-dependent DNA ligase OB-fold domain BM524_20555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BM524_20555 PF01612 3'-5' exonuclease BM524_20555 PF01367 5'-3' exonuclease, C-terminal SAM fold BM524_20555 PF00476 DNA polymerase family A BM524_20600 PF01258 Prokaryotic dksA/traR C4-type zinc finger BM524_20625 PF02254 TrkA-N domain BM524_20625 PF00999 Sodium/hydrogen exchanger family BM524_20675 PF00533 BRCA1 C Terminus (BRCT) domain BM524_20675 PF01653 NAD-dependent DNA ligase adenylation domain BM524_20675 PF03120 NAD-dependent DNA ligase OB-fold domain BM524_20675 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BM524_20675 PF12826 Helix-hairpin-helix motif BM524_20680 PF08206 Ribonuclease B OB domain BM524_20680 PF00575 S1 RNA binding domain BM524_20680 PF00773 RNB domain BM524_20680 PF17876 Cold shock domain BM524_20680 PF08461 Ribonuclease R winged-helix domain BM524_20710 PF18073 Rubredoxin metal binding domain BM524_20720 PF03989 DNA gyrase C-terminal domain, beta-propeller BM524_20720 PF00521 DNA gyrase/topoisomerase IV, subunit A BM524_20725 PF00986 DNA gyrase B subunit, carboxyl terminus BM524_20725 PF00204 DNA gyrase B BM524_20725 PF01751 Toprim domain BM524_20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_20740 PF02463 RecF/RecN/SMC N terminal domain BM524_20745 PF00154 recA bacterial DNA recombination protein BM524_20795 PF17284 Spermidine synthase tetramerisation domain BM524_20920 PF04151 Bacterial pre-peptidase C-terminal domain BM524_20920 PF00082 Subtilase family BM524_20995 PF04539 Sigma-70 region 3 BM524_20995 PF00140 Sigma-70 factor, region 1.2 BM524_20995 PF04542 Sigma-70 region 2 BM524_20995 PF04545 Sigma-70, region 4 BM524_21000 PF08668 HDOD domain BM524_21000 PF00563 EAL domain BM524_21005 PF02562 PhoH-like protein BM524_21005 PF13638 PIN domain BM524_21020 PF02350 UDP-N-acetylglucosamine 2-epimerase BM524_21025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BM524_21025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BM524_21025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BM524_21035 PF16363 GDP-mannose 4,6 dehydratase BM524_21040 PF01370 NAD dependent epimerase/dehydratase family BM524_21085 PF02563 Polysaccharide biosynthesis/export protein BM524_21085 PF10531 SLBB domain BM524_21095 PF02954 Bacterial regulatory protein, Fis family BM524_21095 PF00158 Sigma-54 interaction domain BM524_21095 PF00072 Response regulator receiver domain BM524_21100 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM524_21100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM524_21100 PF00512 His Kinase A (phospho-acceptor) domain BM524_21110 PF00733 Asparagine synthase BM524_21110 PF13537 Glutamine amidotransferase domain BM524_21120 PF13614 AAA domain BM524_21125 PF02195 ParB-like nuclease domain BM524_21125 PF17762 HTH domain found in ParB protein BM524_21140 PF01380 SIS domain BM524_21145 PF13614 AAA domain BM524_21155 PF02397 Bacterial sugar transferase BM524_21170 PF00535 Glycosyl transferase family 2 BM524_21175 PF13537 Glutamine amidotransferase domain BM524_21175 PF00733 Asparagine synthase BM524_21185 PF14667 Polysaccharide biosynthesis C-terminal domain BM524_21185 PF01943 Polysaccharide biosynthesis protein BM524_21195 PF02689 Helicase BM524_21195 PF05970 PIF1-like helicase BM524_21220 PF08411 Exonuclease C-terminal BM524_21220 PF00929 Exonuclease BM524_21245 PF02086 D12 class N6 adenine-specific DNA methyltransferase BM524_21280 PF00990 Diguanylate cyclase, GGDEF domain BM524_21305 PF13538 UvrD-like helicase C-terminal domain BM524_21305 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BM524_21305 PF14490 Helix-hairpin-helix containing domain BM524_21340 PF10502 Signal peptidase, peptidase S26 BM524_21380 PF01323 DSBA-like thioredoxin domain BM524_21415 PF00580 UvrD/REP helicase N-terminal domain BM524_21415 PF13361 UvrD-like helicase C-terminal domain BM524_21435 PF00360 Phytochrome region BM524_21435 PF00563 EAL domain BM524_21435 PF01590 GAF domain BM524_21435 PF00990 Diguanylate cyclase, GGDEF domain BM524_21505 PF14579 Helix-hairpin-helix motif BM524_21505 PF01336 OB-fold nucleic acid binding domain BM524_21505 PF02811 PHP domain BM524_21505 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM524_21505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain