locus-tag class description BM525_00005 PF08299 Bacterial dnaA protein helix-turn-helix BM525_00005 PF11638 DnaA N-terminal domain BM525_00005 PF00308 Bacterial dnaA protein BM525_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BM525_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BM525_00010 PF02767 DNA polymerase III beta subunit, central domain BM525_00015 PF02463 RecF/RecN/SMC N terminal domain BM525_00020 PF01751 Toprim domain BM525_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_00020 PF18053 DNA gyrase B subunit insert domain BM525_00020 PF00986 DNA gyrase B subunit, carboxyl terminus BM525_00020 PF00204 DNA gyrase B BM525_00040 PF02092 Glycyl-tRNA synthetase beta subunit BM525_00040 PF05746 DALR anticodon binding domain BM525_00045 PF02091 Glycyl-tRNA synthetase alpha subunit BM525_00050 PF03352 Methyladenine glycosylase BM525_00060 PF04220 Der GTPase activator (YihI) BM525_00070 PF00034 Cytochrome c BM525_00075 PF01926 50S ribosome-binding GTPase BM525_00080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BM525_00080 PF00476 DNA polymerase family A BM525_00080 PF01612 3'-5' exonuclease BM525_00080 PF01367 5'-3' exonuclease, C-terminal SAM fold BM525_00090 PF02386 Cation transport protein BM525_00095 PF02080 TrkA-C domain BM525_00095 PF02254 TrkA-N domain BM525_00100 PF01189 16S rRNA methyltransferase RsmB/F BM525_00100 PF01029 NusB family BM525_00105 PF00551 Formyl transferase BM525_00105 PF02911 Formyl transferase, C-terminal domain BM525_00110 PF01327 Polypeptide deformylase BM525_00120 PF17782 DprA winged helix domain BM525_00120 PF02481 DNA recombination-mediator protein A BM525_00125 PF04361 Protein of unknown function (DUF494) BM525_00135 PF01300 Telomere recombination BM525_00140 PF01218 Coproporphyrinogen III oxidase BM525_00145 PF03922 OmpW family BM525_00155 PF08501 Shikimate dehydrogenase substrate binding domain BM525_00155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BM525_00155 PF01488 Shikimate / quinate 5-dehydrogenase BM525_00160 PF00132 Bacterial transferase hexapeptide (six repeats) BM525_00200 PF01336 OB-fold nucleic acid binding domain BM525_00200 PF02811 PHP domain BM525_00200 PF14579 Helix-hairpin-helix motif BM525_00200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM525_00200 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM525_00230 PF02225 PA domain BM525_00230 PF04389 Peptidase family M28 BM525_00235 PF05159 Capsule polysaccharide biosynthesis protein BM525_00240 PF00440 Bacterial regulatory proteins, tetR family BM525_00245 PF02441 Flavoprotein BM525_00245 PF04127 DNA / pantothenate metabolism flavoprotein BM525_00250 PF04002 RadC-like JAB domain BM525_00270 PF06082 Exopolysaccharide biosynthesis protein YbjH BM525_00275 PF00830 Ribosomal L28 family BM525_00280 PF00471 Ribosomal protein L33 BM525_00290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BM525_00290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BM525_00290 PF06827 Zinc finger found in FPG and IleRS BM525_00295 PF01467 Cytidylyltransferase-like BM525_00305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BM525_00320 PF00563 EAL domain BM525_00320 PF03707 Bacterial signalling protein N terminal repeat BM525_00320 PF00990 Diguanylate cyclase, GGDEF domain BM525_00325 PF00155 Aminotransferase class I and II BM525_00330 PF08240 Alcohol dehydrogenase GroES-like domain BM525_00330 PF00107 Zinc-binding dehydrogenase BM525_00335 PF00581 Rhodanese-like domain BM525_00340 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BM525_00340 PF01694 Rhomboid family BM525_00350 PF04345 Chorismate lyase BM525_00355 PF01040 UbiA prenyltransferase family BM525_00370 PF04380 Membrane fusogenic activity BM525_00375 PF13361 UvrD-like helicase C-terminal domain BM525_00375 PF00580 UvrD/REP helicase N-terminal domain BM525_00380 PF00563 EAL domain BM525_00380 PF03707 Bacterial signalling protein N terminal repeat BM525_00380 PF00990 Diguanylate cyclase, GGDEF domain BM525_00385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BM525_00415 PF04143 Sulphur transport BM525_00420 PF02082 Transcriptional regulator BM525_00425 PF01925 Sulfite exporter TauE/SafE BM525_00430 PF00753 Metallo-beta-lactamase superfamily BM525_00440 PF07715 TonB-dependent Receptor Plug Domain BM525_00440 PF00593 TonB dependent receptor BM525_00455 PF00005 ABC transporter BM525_00455 PF00664 ABC transporter transmembrane region BM525_00460 PF00005 ABC transporter BM525_00460 PF00664 ABC transporter transmembrane region BM525_00470 PF01654 Cytochrome bd terminal oxidase subunit I BM525_00475 PF00581 Rhodanese-like domain BM525_00475 PF01206 Sulfurtransferase TusA BM525_00480 PF00753 Metallo-beta-lactamase superfamily BM525_00485 PF10417 C-terminal domain of 1-Cys peroxiredoxin BM525_00485 PF00578 AhpC/TSA family BM525_00490 PF02028 BCCT, betaine/carnitine/choline family transporter BM525_00515 PF00145 C-5 cytosine-specific DNA methylase BM525_00520 PF03852 DNA mismatch endonuclease Vsr BM525_00545 PF17757 UvrB interaction domain BM525_00545 PF02559 CarD-like/TRCF domain BM525_00545 PF03461 TRCF domain BM525_00545 PF00271 Helicase conserved C-terminal domain BM525_00545 PF00270 DEAD/DEAH box helicase BM525_00550 PF02151 UvrB/uvrC motif BM525_00550 PF04851 Type III restriction enzyme, res subunit BM525_00550 PF12344 Ultra-violet resistance protein B BM525_00550 PF17757 UvrB interaction domain BM525_00550 PF00271 Helicase conserved C-terminal domain BM525_00560 PF13533 Biotin-lipoyl like BM525_00565 PF00005 ABC transporter BM525_00575 PF00593 TonB dependent receptor BM525_00575 PF07715 TonB-dependent Receptor Plug Domain BM525_00580 PF00593 TonB dependent receptor BM525_00580 PF07715 TonB-dependent Receptor Plug Domain BM525_00590 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_00590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM525_00590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_00595 PF03466 LysR substrate binding domain BM525_00595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_00600 PF00753 Metallo-beta-lactamase superfamily BM525_00605 PF04317 YcjX-like family, DUF463 BM525_00620 PF06968 Biotin and Thiamin Synthesis associated domain BM525_00620 PF04055 Radical SAM superfamily BM525_00625 PF05690 Thiazole biosynthesis protein ThiG BM525_00635 PF00899 ThiF family BM525_00640 PF02581 Thiamine monophosphate synthase BM525_00645 PF13667 ThiC-associated domain BM525_00645 PF01964 Radical SAM ThiC family BM525_00650 PF07219 HemY protein N-terminus BM525_00650 PF07719 Tetratricopeptide repeat BM525_00655 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BM525_00660 PF02602 Uroporphyrinogen-III synthase HemD BM525_00665 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BM525_00665 PF03900 Porphobilinogen deaminase, C-terminal domain BM525_00670 PF00072 Response regulator receiver domain BM525_00670 PF00990 Diguanylate cyclase, GGDEF domain BM525_00680 PF00625 Guanylate kinase BM525_00685 PF01192 RNA polymerase Rpb6 BM525_00690 PF02824 TGS domain BM525_00690 PF04607 Region found in RelA / SpoT proteins BM525_00690 PF13291 ACT domain BM525_00695 PF01042 Endoribonuclease L-PSP BM525_00700 PF00588 SpoU rRNA Methylase family BM525_00700 PF12105 SpoU, rRNA methylase, C-terminal BM525_00705 PF00270 DEAD/DEAH box helicase BM525_00705 PF00271 Helicase conserved C-terminal domain BM525_00705 PF17191 RecG wedge domain BM525_00710 PF04445 Putative SAM-dependent methyltransferase BM525_00715 PF08534 Redoxin BM525_00730 PF00528 Binding-protein-dependent transport system inner membrane component BM525_00735 PF08402 TOBE domain BM525_00735 PF00005 ABC transporter BM525_00740 PF00924 Mechanosensitive ion channel BM525_00740 PF05552 Conserved TM helix BM525_00755 PF04940 Sensors of blue-light using FAD BM525_00755 PF00563 EAL domain BM525_00760 PF03466 LysR substrate binding domain BM525_00760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_00765 PF01810 LysE type translocator BM525_00770 PF00893 Small Multidrug Resistance protein BM525_00785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM525_00785 PF00529 HlyD membrane-fusion protein of T1SS BM525_00790 PF00873 AcrB/AcrD/AcrF family BM525_00800 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BM525_00800 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BM525_00805 PF00850 Histone deacetylase domain BM525_00820 PF00672 HAMP domain BM525_00820 PF02743 Cache domain BM525_00820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_00830 PF11737 Protein of unknown function (DUF3300) BM525_00835 PF00925 GTP cyclohydrolase II BM525_00840 PF00990 Diguanylate cyclase, GGDEF domain BM525_00840 PF00563 EAL domain BM525_00840 PF08448 PAS fold BM525_00855 PF00270 DEAD/DEAH box helicase BM525_00855 PF09382 RQC domain BM525_00855 PF16124 RecQ zinc-binding BM525_00855 PF00570 HRDC domain BM525_00855 PF00271 Helicase conserved C-terminal domain BM525_00860 PF00571 CBS domain BM525_00860 PF01769 Divalent cation transporter BM525_00860 PF03448 MgtE intracellular N domain BM525_00865 PF00892 EamA-like transporter family BM525_00870 PF00072 Response regulator receiver domain BM525_00870 PF00990 Diguanylate cyclase, GGDEF domain BM525_00875 PF00580 UvrD/REP helicase N-terminal domain BM525_00875 PF13361 UvrD-like helicase C-terminal domain BM525_00880 PF06426 Serine acetyltransferase, N-terminal BM525_00880 PF00132 Bacterial transferase hexapeptide (six repeats) BM525_00885 PF13419 Haloacid dehalogenase-like hydrolase BM525_00900 PF01678 Diaminopimelate epimerase BM525_00905 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BM525_00905 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BM525_00920 PF01569 PAP2 superfamily BM525_00925 PF03737 Aldolase/RraA BM525_00935 PF02441 Flavoprotein BM525_00940 PF02875 Mur ligase family, glutamate ligase domain BM525_00940 PF01225 Mur ligase family, catalytic domain BM525_00940 PF08245 Mur ligase middle domain BM525_00945 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BM525_00950 PF00719 Inorganic pyrophosphatase BM525_00985 PF00005 ABC transporter BM525_00985 PF17755 UvrA DNA-binding domain BM525_00985 PF17760 UvrA interaction domain BM525_00990 PF07690 Major Facilitator Superfamily BM525_00995 PF13419 Haloacid dehalogenase-like hydrolase BM525_01010 PF00356 Bacterial regulatory proteins, lacI family BM525_01020 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BM525_01020 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BM525_01025 PF10509 Galactokinase galactose-binding signature BM525_01025 PF08544 GHMP kinases C terminal BM525_01025 PF00288 GHMP kinases N terminal domain BM525_01030 PF00474 Sodium:solute symporter family BM525_01035 PF00436 Single-strand binding protein family BM525_01050 PF16874 Glycosyl hydrolase family 36 C-terminal domain BM525_01050 PF16875 Glycosyl hydrolase family 36 N-terminal domain BM525_01060 PF00474 Sodium:solute symporter family BM525_01080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BM525_01080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BM525_01085 PF00455 DeoR C terminal sensor domain BM525_01085 PF08220 DeoR-like helix-turn-helix domain BM525_01090 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BM525_01090 PF01266 FAD dependent oxidoreductase BM525_01125 PF03958 Bacterial type II/III secretion system short domain BM525_01125 PF00263 Bacterial type II and III secretion system protein BM525_01130 PF13401 AAA domain BM525_01130 PF01471 Putative peptidoglycan binding domain BM525_01140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BM525_01140 PF00437 Type II/IV secretion system protein BM525_01145 PF00482 Type II secretion system (T2SS), protein F BM525_01155 PF07963 Prokaryotic N-terminal methylation motif BM525_01155 PF00114 Pilin (bacterial filament) BM525_01160 PF00114 Pilin (bacterial filament) BM525_01160 PF07963 Prokaryotic N-terminal methylation motif BM525_01165 PF07963 Prokaryotic N-terminal methylation motif BM525_01165 PF00114 Pilin (bacterial filament) BM525_01195 PF04085 rod shape-determining protein MreC BM525_01200 PF04093 rod shape-determining protein MreD BM525_01205 PF02545 Maf-like protein BM525_01210 PF10150 Ribonuclease E/G family BM525_01210 PF00575 S1 RNA binding domain BM525_01220 PF00795 Carbon-nitrogen hydrolase BM525_01225 PF01523 Putative modulator of DNA gyrase BM525_01230 PF04751 Protein of unknown function (DUF615) BM525_01235 PF01523 Putative modulator of DNA gyrase BM525_01245 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BM525_01245 PF16353 Domain of unknown function(DUF4981) BM525_01245 PF02837 Glycosyl hydrolases family 2, sugar binding domain BM525_01245 PF02929 Beta galactosidase small chain BM525_01245 PF00703 Glycosyl hydrolases family 2 BM525_01250 PF00072 Response regulator receiver domain BM525_01250 PF00486 Transcriptional regulatory protein, C terminal BM525_01255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_01255 PF00512 His Kinase A (phospho-acceptor) domain BM525_01255 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM525_01260 PF08323 Starch synthase catalytic domain BM525_01260 PF00534 Glycosyl transferases group 1 BM525_01265 PF08468 Methyltransferase small domain N-terminal BM525_01265 PF05175 Methyltransferase small domain BM525_01270 PF02390 Putative methyltransferase BM525_01275 PF00561 alpha/beta hydrolase fold BM525_01280 PF14815 NUDIX domain BM525_01280 PF00730 HhH-GPD superfamily base excision DNA repair protein BM525_01280 PF00633 Helix-hairpin-helix motif BM525_01285 PF04362 Bacterial Fe(2+) trafficking BM525_01300 PF08787 Alginate lyase BM525_01310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_01310 PF03466 LysR substrate binding domain BM525_01315 PF07690 Major Facilitator Superfamily BM525_01320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_01320 PF00672 HAMP domain BM525_01320 PF17200 Single Cache domain 2 BM525_01325 PF00072 Response regulator receiver domain BM525_01330 PF01584 CheW-like domain BM525_01330 PF09078 CheY binding BM525_01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_01330 PF01627 Hpt domain BM525_01330 PF02895 Signal transducing histidine kinase, homodimeric domain BM525_01335 PF01584 CheW-like domain BM525_01340 PF13426 PAS domain BM525_01340 PF08447 PAS fold BM525_01340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_01345 PF03705 CheR methyltransferase, all-alpha domain BM525_01345 PF01739 CheR methyltransferase, SAM binding domain BM525_01350 PF03975 CheD chemotactic sensory transduction BM525_01355 PF00072 Response regulator receiver domain BM525_01355 PF01339 CheB methylesterase BM525_01360 PF00672 HAMP domain BM525_01360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_01360 PF17200 Single Cache domain 2 BM525_01365 PF00072 Response regulator receiver domain BM525_01370 PF02895 Signal transducing histidine kinase, homodimeric domain BM525_01370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_01370 PF09078 CheY binding BM525_01370 PF01584 CheW-like domain BM525_01370 PF01627 Hpt domain BM525_01375 PF01584 CheW-like domain BM525_01380 PF13426 PAS domain BM525_01380 PF08447 PAS fold BM525_01380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_01385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_01385 PF08447 PAS fold BM525_01385 PF13426 PAS domain BM525_01390 PF03705 CheR methyltransferase, all-alpha domain BM525_01390 PF01739 CheR methyltransferase, SAM binding domain BM525_01395 PF03975 CheD chemotactic sensory transduction BM525_01400 PF00072 Response regulator receiver domain BM525_01400 PF01339 CheB methylesterase BM525_01420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BM525_01420 PF00356 Bacterial regulatory proteins, lacI family BM525_01430 PF01204 Trehalase BM525_01445 PF13419 Haloacid dehalogenase-like hydrolase BM525_01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_01450 PF00072 Response regulator receiver domain BM525_01450 PF13426 PAS domain BM525_01450 PF08448 PAS fold BM525_01450 PF00512 His Kinase A (phospho-acceptor) domain BM525_01465 PF00356 Bacterial regulatory proteins, lacI family BM525_01470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM525_01470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM525_01480 PF03825 Nucleoside H+ symporter BM525_01485 PF01261 Xylose isomerase-like TIM barrel BM525_01490 PF05199 GMC oxidoreductase BM525_01490 PF00732 GMC oxidoreductase BM525_01505 PF00465 Iron-containing alcohol dehydrogenase BM525_01530 PF01063 Amino-transferase class IV BM525_01535 PF00300 Histidine phosphatase superfamily (branch 1) BM525_01545 PF00694 Aconitase C-terminal domain BM525_01545 PF00330 Aconitase family (aconitate hydratase) BM525_01555 PF00437 Type II/IV secretion system protein BM525_01560 PF00338 Ribosomal protein S10p/S20e BM525_01565 PF00297 Ribosomal protein L3 BM525_01570 PF00573 Ribosomal protein L4/L1 family BM525_01575 PF00276 Ribosomal protein L23 BM525_01580 PF03947 Ribosomal Proteins L2, C-terminal domain BM525_01580 PF00181 Ribosomal Proteins L2, RNA binding domain BM525_01585 PF00203 Ribosomal protein S19 BM525_01590 PF00237 Ribosomal protein L22p/L17e BM525_01595 PF00189 Ribosomal protein S3, C-terminal domain BM525_01595 PF07650 KH domain BM525_01600 PF00252 Ribosomal protein L16p/L10e BM525_01605 PF00831 Ribosomal L29 protein BM525_01610 PF00366 Ribosomal protein S17 BM525_01615 PF13439 Glycosyltransferase Family 4 BM525_01615 PF00534 Glycosyl transferases group 1 BM525_01625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BM525_01625 PF00534 Glycosyl transferases group 1 BM525_01645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_01645 PF00672 HAMP domain BM525_01645 PF02743 Cache domain BM525_01650 PF01432 Peptidase family M3 BM525_01660 PF00551 Formyl transferase BM525_01660 PF01842 ACT domain BM525_01670 PF00271 Helicase conserved C-terminal domain BM525_01670 PF08482 ATP-dependent helicase C-terminal BM525_01670 PF00270 DEAD/DEAH box helicase BM525_01670 PF04408 Helicase associated domain (HA2) BM525_01675 PF13406 Transglycosylase SLT domain BM525_01680 PF00912 Transglycosylase BM525_01680 PF00905 Penicillin binding protein transpeptidase domain BM525_01680 PF14814 Bifunctional transglycosylase second domain BM525_01690 PF05661 Protein of unknown function (DUF808) BM525_01700 PF12833 Helix-turn-helix domain BM525_01710 PF00543 Nitrogen regulatory protein P-II BM525_01715 PF00909 Ammonium Transporter Family BM525_01725 PF04261 Dyp-type peroxidase family BM525_01730 PF00211 Adenylate and Guanylate cyclase catalytic domain BM525_01730 PF00672 HAMP domain BM525_01735 PF00202 Aminotransferase class-III BM525_01740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BM525_01740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BM525_01755 PF00873 AcrB/AcrD/AcrF family BM525_01765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM525_01765 PF00072 Response regulator receiver domain BM525_01765 PF01627 Hpt domain BM525_01765 PF00512 His Kinase A (phospho-acceptor) domain BM525_01765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_01765 PF00672 HAMP domain BM525_01770 PF03989 DNA gyrase C-terminal domain, beta-propeller BM525_01770 PF00521 DNA gyrase/topoisomerase IV, subunit A BM525_01780 PF13188 PAS domain BM525_01780 PF00563 EAL domain BM525_01780 PF03707 Bacterial signalling protein N terminal repeat BM525_01780 PF00990 Diguanylate cyclase, GGDEF domain BM525_01790 PF00171 Aldehyde dehydrogenase family BM525_01795 PF04958 Arginine N-succinyltransferase beta subunit BM525_01800 PF00202 Aminotransferase class-III BM525_01810 PF00117 Glutamine amidotransferase class-I BM525_01815 PF00579 tRNA synthetases class I (W and Y) BM525_01820 PF00834 Ribulose-phosphate 3 epimerase family BM525_01840 PF02086 D12 class N6 adenine-specific DNA methyltransferase BM525_01850 PF01761 3-dehydroquinate synthase BM525_01855 PF01202 Shikimate kinase BM525_01860 PF00263 Bacterial type II and III secretion system protein BM525_01860 PF03958 Bacterial type II/III secretion system short domain BM525_01860 PF07660 Secretin and TonB N terminus short domain BM525_01860 PF11741 AMIN domain BM525_01885 PF00912 Transglycosylase BM525_01885 PF17092 Penicillin-binding protein OB-like domain BM525_01885 PF00905 Penicillin binding protein transpeptidase domain BM525_01890 PF00390 Malic enzyme, N-terminal domain BM525_01890 PF03949 Malic enzyme, NAD binding domain BM525_01900 PF02798 Glutathione S-transferase, N-terminal domain BM525_01910 PF06628 Catalase-related immune-responsive BM525_01910 PF00199 Catalase BM525_01935 PF03707 Bacterial signalling protein N terminal repeat BM525_01935 PF00563 EAL domain BM525_01935 PF00990 Diguanylate cyclase, GGDEF domain BM525_01940 PF00696 Amino acid kinase family BM525_01940 PF00583 Acetyltransferase (GNAT) family BM525_01945 PF00206 Lyase BM525_01945 PF14698 Argininosuccinate lyase C-terminal BM525_01950 PF00764 Arginosuccinate synthase BM525_01955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BM525_01955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BM525_01960 PF00696 Amino acid kinase family BM525_01965 PF01118 Semialdehyde dehydrogenase, NAD binding domain BM525_01965 PF02774 Semialdehyde dehydrogenase, dimerisation domain BM525_01970 PF02142 MGS-like domain BM525_01980 PF02107 Flagellar L-ring protein BM525_01995 PF00072 Response regulator receiver domain BM525_01995 PF00486 Transcriptional regulatory protein, C terminal BM525_02000 PF16527 Two-component sensor protein CpxA, periplasmic domain BM525_02000 PF00672 HAMP domain BM525_02000 PF00512 His Kinase A (phospho-acceptor) domain BM525_02000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_02005 PF12146 Serine aminopeptidase, S33 BM525_02010 PF00588 SpoU rRNA Methylase family BM525_02020 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BM525_02020 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BM525_02025 PF02556 Preprotein translocase subunit SecB BM525_02030 PF00462 Glutaredoxin BM525_02035 PF00581 Rhodanese-like domain BM525_02040 PF01551 Peptidase family M23 BM525_02045 PF04748 Divergent polysaccharide deacetylase BM525_02065 PF02666 Phosphatidylserine decarboxylase BM525_02070 PF03193 RsgA GTPase BM525_02075 PF00929 Exonuclease BM525_02090 PF00593 TonB dependent receptor BM525_02090 PF07715 TonB-dependent Receptor Plug Domain BM525_02105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BM525_02105 PF00205 Thiamine pyrophosphate enzyme, central domain BM525_02105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BM525_02110 PF10369 Small subunit of acetolactate synthase BM525_02120 PF02416 mttA/Hcf106 family BM525_02125 PF02416 mttA/Hcf106 family BM525_02130 PF00902 Sec-independent protein translocase protein (TatC) BM525_02140 PF01026 TatD related DNase BM525_02145 PF00990 Diguanylate cyclase, GGDEF domain BM525_02145 PF00360 Phytochrome region BM525_02145 PF01590 GAF domain BM525_02145 PF00563 EAL domain BM525_02150 PF00490 Delta-aminolevulinic acid dehydratase BM525_02155 PF02541 Ppx/GppA phosphatase family BM525_02160 PF00270 DEAD/DEAH box helicase BM525_02160 PF00271 Helicase conserved C-terminal domain BM525_02165 PF00085 Thioredoxin BM525_02170 PF07497 Rho termination factor, RNA-binding domain BM525_02170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM525_02170 PF07498 Rho termination factor, N-terminal domain BM525_02180 PF09308 LuxQ, periplasmic BM525_02180 PF00512 His Kinase A (phospho-acceptor) domain BM525_02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_02180 PF00072 Response regulator receiver domain BM525_02185 PF06965 Na+/H+ antiporter 1 BM525_02190 PF00731 AIR carboxylase BM525_02195 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BM525_02195 PF02222 ATP-grasp domain BM525_02210 PF00210 Ferritin-like domain BM525_02215 PF07995 Glucose / Sorbosone dehydrogenase BM525_02220 PF00326 Prolyl oligopeptidase family BM525_02220 PF07676 WD40-like Beta Propeller Repeat BM525_02230 PF00085 Thioredoxin BM525_02245 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BM525_02250 PF00709 Adenylosuccinate synthetase BM525_02255 PF00171 Aldehyde dehydrogenase family BM525_02275 PF03553 Na+/H+ antiporter family BM525_02280 PF00933 Glycosyl hydrolase family 3 N terminal domain BM525_02290 PF07075 Protein of unknown function (DUF1343) BM525_02295 PF01380 SIS domain BM525_02300 PF00842 Alanine racemase, C-terminal domain BM525_02300 PF01168 Alanine racemase, N-terminal domain BM525_02305 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BM525_02315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM525_02340 PF08274 PhnA Zinc-Ribbon BM525_02340 PF03831 PhnA domain BM525_02345 PF00583 Acetyltransferase (GNAT) family BM525_02365 PF01381 Helix-turn-helix BM525_02370 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BM525_02430 PF13495 Phage integrase, N-terminal SAM-like domain BM525_02430 PF00589 Phage integrase family BM525_02435 PF02803 Thiolase, C-terminal domain BM525_02435 PF00108 Thiolase, N-terminal domain BM525_02440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM525_02440 PF00378 Enoyl-CoA hydratase/isomerase BM525_02440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM525_02445 PF01464 Transglycosylase SLT domain BM525_02445 PF14718 Soluble lytic murein transglycosylase L domain BM525_02450 PF00557 Metallopeptidase family M24 BM525_02460 PF00348 Polyprenyl synthetase BM525_02465 PF00829 Ribosomal prokaryotic L21 protein BM525_02470 PF01016 Ribosomal L27 protein BM525_02475 PF01018 GTP1/OBG BM525_02475 PF01926 50S ribosome-binding GTPase BM525_02480 PF00186 Dihydrofolate reductase BM525_02485 PF04539 Sigma-70 region 3 BM525_02485 PF04542 Sigma-70 region 2 BM525_02485 PF04545 Sigma-70, region 4 BM525_02485 PF00140 Sigma-70 factor, region 1.2 BM525_02490 PF01551 Peptidase family M23 BM525_02490 PF01476 LysM domain BM525_02495 PF09335 SNARE associated Golgi protein BM525_02505 PF01142 tRNA pseudouridine synthase D (TruD) BM525_02510 PF02542 YgbB family BM525_02515 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BM525_02520 PF04977 Septum formation initiator BM525_02530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_02530 PF00672 HAMP domain BM525_02530 PF17200 Single Cache domain 2 BM525_02540 PF00171 Aldehyde dehydrogenase family BM525_02540 PF01619 Proline dehydrogenase BM525_02540 PF14850 DNA-binding domain of Proline dehydrogenase BM525_02540 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BM525_02560 PF02976 DNA mismatch repair enzyme MutH BM525_02565 PF00293 NUDIX domain BM525_02570 PF05524 PEP-utilising enzyme, N-terminal BM525_02570 PF02896 PEP-utilising enzyme, TIM barrel domain BM525_02570 PF00391 PEP-utilising enzyme, mobile domain BM525_02570 PF01590 GAF domain BM525_02575 PF01925 Sulfite exporter TauE/SafE BM525_02580 PF01790 Prolipoprotein diacylglyceryl transferase BM525_02585 PF00303 Thymidylate synthase BM525_02590 PF01339 CheB methylesterase BM525_02590 PF00072 Response regulator receiver domain BM525_02595 PF00072 Response regulator receiver domain BM525_02595 PF00990 Diguanylate cyclase, GGDEF domain BM525_02600 PF07690 Major Facilitator Superfamily BM525_02615 PF00849 RNA pseudouridylate synthase BM525_02620 PF18337 RapA N-terminal Tudor like domain BM525_02620 PF18339 RapA N-terminal Tudor like domain 1 BM525_02620 PF00176 SNF2 family N-terminal domain BM525_02620 PF12137 RNA polymerase recycling family C-terminal BM525_02620 PF00271 Helicase conserved C-terminal domain BM525_02635 PF13638 PIN domain BM525_02635 PF02562 PhoH-like protein BM525_02645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BM525_02645 PF10414 Sirohaem synthase dimerisation region BM525_02650 PF00270 DEAD/DEAH box helicase BM525_02650 PF00271 Helicase conserved C-terminal domain BM525_02650 PF03880 DbpA RNA binding domain BM525_02665 PF02321 Outer membrane efflux protein BM525_02670 PF00293 NUDIX domain BM525_02680 PF00149 Calcineurin-like phosphoesterase BM525_02685 PF05728 Uncharacterised protein family (UPF0227) BM525_02690 PF00204 DNA gyrase B BM525_02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_02690 PF01751 Toprim domain BM525_02690 PF00986 DNA gyrase B subunit, carboxyl terminus BM525_02700 PF13419 Haloacid dehalogenase-like hydrolase BM525_02725 PF04055 Radical SAM superfamily BM525_02735 PF00152 tRNA synthetases class II (D, K and N) BM525_02740 PF00593 TonB dependent receptor BM525_02740 PF07715 TonB-dependent Receptor Plug Domain BM525_02750 PF13302 Acetyltransferase (GNAT) domain BM525_02755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BM525_02760 PF05175 Methyltransferase small domain BM525_02770 PF01722 BolA-like protein BM525_02775 PF01569 PAP2 superfamily BM525_02785 PF08376 Nitrate and nitrite sensing BM525_02785 PF03861 ANTAR domain BM525_02800 PF00916 Sulfate permease family BM525_02800 PF01740 STAS domain BM525_02805 PF04324 BFD-like [2Fe-2S] binding domain BM525_02805 PF18267 Rubredoxin NAD+ reductase C-terminal domain BM525_02805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BM525_02805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BM525_02805 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_02815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BM525_02815 PF04324 BFD-like [2Fe-2S] binding domain BM525_02815 PF01568 Molydopterin dinucleotide binding domain BM525_02815 PF00384 Molybdopterin oxidoreductase BM525_02820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BM525_02820 PF14824 Sirohaem biosynthesis protein central BM525_02820 PF10414 Sirohaem synthase dimerisation region BM525_02825 PF02885 Glycosyl transferase family, helical bundle domain BM525_02825 PF00591 Glycosyl transferase family, a/b domain BM525_02830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_02830 PF08447 PAS fold BM525_02830 PF13426 PAS domain BM525_02835 PF00005 ABC transporter BM525_02840 PF00528 Binding-protein-dependent transport system inner membrane component BM525_02845 PF00005 ABC transporter BM525_02860 PF01323 DSBA-like thioredoxin domain BM525_02865 PF07715 TonB-dependent Receptor Plug Domain BM525_02865 PF00593 TonB dependent receptor BM525_02870 PF01636 Phosphotransferase enzyme family BM525_02875 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BM525_02875 PF12801 4Fe-4S binding domain BM525_02875 PF13746 4Fe-4S dicluster domain BM525_02890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM525_02890 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_02890 PF12806 Acetyl-CoA dehydrogenase C-terminal like BM525_02890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_02905 PF13378 Enolase C-terminal domain-like BM525_02905 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BM525_02910 PF00596 Class II Aldolase and Adducin N-terminal domain BM525_02920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM525_02925 PF00873 AcrB/AcrD/AcrF family BM525_02940 PF00672 HAMP domain BM525_02940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_02940 PF02743 Cache domain BM525_02945 PF00140 Sigma-70 factor, region 1.2 BM525_02945 PF04542 Sigma-70 region 2 BM525_02945 PF04546 Sigma-70, non-essential region BM525_02945 PF04539 Sigma-70 region 3 BM525_02945 PF04545 Sigma-70, region 4 BM525_02945 PF03979 Sigma-70 factor, region 1.1 BM525_02950 PF01807 CHC2 zinc finger BM525_02950 PF08275 DNA primase catalytic core, N-terminal domain BM525_02950 PF08278 DNA primase DnaG DnaB-binding BM525_02950 PF10410 DnaB-helicase binding domain of primase BM525_02955 PF09424 Yqey-like protein BM525_02960 PF01165 Ribosomal protein S21 BM525_02965 PF00814 Glycoprotease family BM525_02975 PF02660 Glycerol-3-phosphate acyltransferase BM525_02980 PF02152 Dihydroneopterin aldolase BM525_02990 PF02673 Bacitracin resistance protein BacA BM525_02995 PF01230 HIT domain BM525_03010 PF03594 Benzoate membrane transport protein BM525_03015 PF01381 Helix-turn-helix BM525_03015 PF07883 Cupin domain BM525_03020 PF04381 Putative exonuclease, RdgC BM525_03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_03025 PF00512 His Kinase A (phospho-acceptor) domain BM525_03025 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM525_03030 PF00072 Response regulator receiver domain BM525_03030 PF00486 Transcriptional regulatory protein, C terminal BM525_03035 PF00512 His Kinase A (phospho-acceptor) domain BM525_03035 PF00989 PAS fold BM525_03035 PF11808 Phosphate regulon sensor protein PhoR BM525_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_03040 PF12849 PBP superfamily domain BM525_03060 PF01618 MotA/TolQ/ExbB proton channel family BM525_03065 PF01618 MotA/TolQ/ExbB proton channel family BM525_03070 PF02472 Biopolymer transport protein ExbD/TolR BM525_03075 PF03544 Gram-negative bacterial TonB protein C-terminal BM525_03085 PF00072 Response regulator receiver domain BM525_03090 PF00672 HAMP domain BM525_03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_03090 PF00512 His Kinase A (phospho-acceptor) domain BM525_03090 PF01627 Hpt domain BM525_03090 PF00072 Response regulator receiver domain BM525_03090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM525_03095 PF13193 AMP-binding enzyme C-terminal domain BM525_03095 PF00501 AMP-binding enzyme BM525_03105 PF07995 Glucose / Sorbosone dehydrogenase BM525_03110 PF00330 Aconitase family (aconitate hydratase) BM525_03110 PF06434 Aconitate hydratase 2 N-terminus BM525_03110 PF11791 Aconitate B N-terminal domain BM525_03115 PF01048 Phosphorylase superfamily BM525_03135 PF11791 Aconitate B N-terminal domain BM525_03135 PF00330 Aconitase family (aconitate hydratase) BM525_03135 PF06434 Aconitate hydratase 2 N-terminus BM525_03145 PF00696 Amino acid kinase family BM525_03145 PF01842 ACT domain BM525_03150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_03150 PF00672 HAMP domain BM525_03155 PF00149 Calcineurin-like phosphoesterase BM525_03160 PF04379 ApaG domain BM525_03165 PF00398 Ribosomal RNA adenine dimethylase BM525_03170 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BM525_03175 PF09312 SurA N-terminal domain BM525_03175 PF00639 PPIC-type PPIASE domain BM525_03180 PF03968 OstA-like protein BM525_03180 PF04453 LPS transport system D BM525_03185 PF05099 Tellurite resistance protein TerB BM525_03185 PF00226 DnaJ domain BM525_03190 PF00589 Phage integrase family BM525_03190 PF02899 Phage integrase, N-terminal SAM-like domain BM525_03195 PF10411 Disulfide bond isomerase protein N-terminus BM525_03195 PF13098 Thioredoxin-like domain BM525_03200 PF17768 RecJ OB domain BM525_03200 PF01368 DHH family BM525_03200 PF02272 DHHA1 domain BM525_03210 PF02565 Recombination protein O C terminal BM525_03210 PF11967 Recombination protein O N terminal BM525_03215 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BM525_03220 PF01648 4'-phosphopantetheinyl transferase superfamily BM525_03225 PF05958 tRNA (Uracil-5-)-methyltransferase BM525_03230 PF04607 Region found in RelA / SpoT proteins BM525_03230 PF13291 ACT domain BM525_03230 PF02824 TGS domain BM525_03235 PF03819 MazG nucleotide pyrophosphohydrolase domain BM525_03255 PF00572 Ribosomal protein L13 BM525_03260 PF00380 Ribosomal protein S9/S16 BM525_03265 PF00355 Rieske [2Fe-2S] domain BM525_03265 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BM525_03270 PF00033 Cytochrome b/b6/petB BM525_03270 PF00032 Cytochrome b(C-terminal)/b6/petD BM525_03275 PF02167 Cytochrome C1 family BM525_03280 PF02798 Glutathione S-transferase, N-terminal domain BM525_03280 PF00043 Glutathione S-transferase, C-terminal domain BM525_03285 PF04386 Stringent starvation protein B BM525_03300 PF00072 Response regulator receiver domain BM525_03300 PF00486 Transcriptional regulatory protein, C terminal BM525_03305 PF01769 Divalent cation transporter BM525_03305 PF00571 CBS domain BM525_03305 PF03448 MgtE intracellular N domain BM525_03310 PF00381 PTS HPr component phosphorylation site BM525_03315 PF03668 P-loop ATPase protein family BM525_03320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BM525_03325 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BM525_03330 PF04552 Sigma-54, DNA binding domain BM525_03330 PF04963 Sigma-54 factor, core binding domain BM525_03330 PF00309 Sigma-54 factor, Activator interacting domain (AID) BM525_03335 PF12399 Branched-chain amino acid ATP-binding cassette transporter BM525_03335 PF00005 ABC transporter BM525_03340 PF03968 OstA-like protein BM525_03355 PF00571 CBS domain BM525_03355 PF01380 SIS domain BM525_03360 PF01699 Sodium/calcium exchanger protein BM525_03365 PF00005 ABC transporter BM525_03370 PF02405 Permease MlaE BM525_03375 PF02470 MlaD protein BM525_03380 PF05494 MlaC protein BM525_03390 PF01722 BolA-like protein BM525_03395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BM525_03400 PF13180 PDZ domain BM525_03405 PF13180 PDZ domain BM525_03405 PF00595 PDZ domain BM525_03415 PF03969 AFG1-like ATPase BM525_03420 PF01709 Transcriptional regulator BM525_03435 PF00990 Diguanylate cyclase, GGDEF domain BM525_03435 PF00563 EAL domain BM525_03435 PF03707 Bacterial signalling protein N terminal repeat BM525_03440 PF00881 Nitroreductase family BM525_03450 PF02355 Protein export membrane protein BM525_03450 PF07549 SecD/SecF GG Motif BM525_03455 PF02080 TrkA-C domain BM525_03455 PF00999 Sodium/hydrogen exchanger family BM525_03455 PF03471 Transporter associated domain BM525_03465 PF00593 TonB dependent receptor BM525_03465 PF07715 TonB-dependent Receptor Plug Domain BM525_03470 PF00892 EamA-like transporter family BM525_03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_03475 PF00072 Response regulator receiver domain BM525_03475 PF00512 His Kinase A (phospho-acceptor) domain BM525_03475 PF09308 LuxQ, periplasmic BM525_03480 PF13458 Periplasmic binding protein BM525_03495 PF00438 S-adenosylmethionine synthetase, N-terminal domain BM525_03495 PF02772 S-adenosylmethionine synthetase, central domain BM525_03495 PF02773 S-adenosylmethionine synthetase, C-terminal domain BM525_03500 PF00456 Transketolase, thiamine diphosphate binding domain BM525_03500 PF02780 Transketolase, C-terminal domain BM525_03500 PF02779 Transketolase, pyrimidine binding domain BM525_03505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM525_03505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BM525_03510 PF00162 Phosphoglycerate kinase BM525_03515 PF00274 Fructose-bisphosphate aldolase class-I BM525_03525 PF07676 WD40-like Beta Propeller Repeat BM525_03525 PF00326 Prolyl oligopeptidase family BM525_03530 PF02541 Ppx/GppA phosphatase family BM525_03535 PF17941 Polyphosphate kinase C-terminal domain 1 BM525_03535 PF13090 Polyphosphate kinase C-terminal domain 2 BM525_03535 PF02503 Polyphosphate kinase middle domain BM525_03535 PF13089 Polyphosphate kinase N-terminal domain BM525_03545 PF00528 Binding-protein-dependent transport system inner membrane component BM525_03550 PF00528 Binding-protein-dependent transport system inner membrane component BM525_03555 PF00005 ABC transporter BM525_03560 PF01895 PhoU domain BM525_03565 PF01384 Phosphate transporter family BM525_03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_03575 PF03466 LysR substrate binding domain BM525_03585 PF03006 Haemolysin-III related BM525_03590 PF01047 MarR family BM525_03595 PF02566 OsmC-like protein BM525_03600 PF01433 Peptidase family M1 domain BM525_03610 PF01205 Uncharacterized protein family UPF0029 BM525_03610 PF09186 Domain of unknown function (DUF1949) BM525_03620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_03620 PF08447 PAS fold BM525_03620 PF13426 PAS domain BM525_03630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_03630 PF03466 LysR substrate binding domain BM525_03635 PF00248 Aldo/keto reductase family BM525_03645 PF03714 Bacterial pullanase-associated domain BM525_03645 PF02806 Alpha amylase, C-terminal all-beta domain BM525_03645 PF00128 Alpha amylase, catalytic domain BM525_03650 PF00149 Calcineurin-like phosphoesterase BM525_03650 PF12320 Type 5 capsule protein repressor C-terminal domain BM525_03655 PF13476 AAA domain BM525_03665 PF00375 Sodium:dicarboxylate symporter family BM525_03680 PF00491 Arginase family BM525_03685 PF01979 Amidohydrolase family BM525_03690 PF00392 Bacterial regulatory proteins, gntR family BM525_03690 PF07702 UTRA domain BM525_03700 PF00221 Aromatic amino acid lyase BM525_03725 PF12848 ABC transporter BM525_03725 PF00005 ABC transporter BM525_03750 PF00924 Mechanosensitive ion channel BM525_03775 PF09722 Protein of unknown function (DUF2384) BM525_03775 PF01936 NYN domain BM525_03780 PF00589 Phage integrase family BM525_03785 PF12894 Anaphase-promoting complex subunit 4 WD40 domain BM525_03785 PF00400 WD domain, G-beta repeat BM525_03825 PF01867 CRISPR associated protein Cas1 BM525_03845 PF09618 CRISPR-associated protein (Cas_Csy4) BM525_03885 PF04172 LrgB-like family BM525_03890 PF00072 Response regulator receiver domain BM525_03915 PF06969 HemN C-terminal domain BM525_03915 PF04055 Radical SAM superfamily BM525_03920 PF01725 Ham1 family BM525_03925 PF00271 Helicase conserved C-terminal domain BM525_03925 PF00270 DEAD/DEAH box helicase BM525_03930 PF12627 Probable RNA and SrmB- binding site of polymerase A BM525_03930 PF01743 Poly A polymerase head domain BM525_03935 PF01471 Putative peptidoglycan binding domain BM525_03935 PF13401 AAA domain BM525_03945 PF11871 Domain of unknown function (DUF3391) BM525_03945 PF01966 HD domain BM525_03950 PF00694 Aconitase C-terminal domain BM525_03955 PF00330 Aconitase family (aconitate hydratase) BM525_03960 PF00180 Isocitrate/isopropylmalate dehydrogenase BM525_03965 PF00682 HMGL-like BM525_03965 PF08502 LeuA allosteric (dimerisation) domain BM525_03980 PF03952 Enolase, N-terminal domain BM525_03980 PF00113 Enolase, C-terminal TIM barrel domain BM525_03985 PF00117 Glutamine amidotransferase class-I BM525_03985 PF06418 CTP synthase N-terminus BM525_03990 PF05190 MutS family domain IV BM525_03990 PF05188 MutS domain II BM525_03990 PF00488 MutS domain V BM525_03990 PF01624 MutS domain I BM525_03990 PF05192 MutS domain III BM525_03995 PF02464 Competence-damaged protein BM525_04000 PF00154 recA bacterial DNA recombination protein BM525_04005 PF00005 ABC transporter BM525_04010 PF12679 ABC-2 family transporter protein BM525_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_04015 PF00512 His Kinase A (phospho-acceptor) domain BM525_04015 PF00672 HAMP domain BM525_04020 PF00072 Response regulator receiver domain BM525_04020 PF00486 Transcriptional regulatory protein, C terminal BM525_04050 PF00005 ABC transporter BM525_04055 PF03379 CcmB protein BM525_04060 PF01578 Cytochrome C assembly protein BM525_04065 PF04995 Heme exporter protein D (CcmD) BM525_04070 PF03100 CcmE BM525_04075 PF01578 Cytochrome C assembly protein BM525_04075 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BM525_04080 PF08534 Redoxin BM525_04085 PF03918 Cytochrome C biogenesis protein BM525_04095 PF04333 MlaA lipoprotein BM525_04100 PF16363 GDP-mannose 4,6 dehydratase BM525_04110 PF00854 POT family BM525_04120 PF00005 ABC transporter BM525_04140 PF00953 Glycosyl transferase family 4 BM525_04155 PF00483 Nucleotidyl transferase BM525_04160 PF10531 SLBB domain BM525_04165 PF00180 Isocitrate/isopropylmalate dehydrogenase BM525_04165 PF18324 Hypothetical protein TT1725 BM525_04180 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BM525_04180 PF03641 Possible lysine decarboxylase BM525_04180 PF11892 Domain of unknown function (DUF3412) BM525_04185 PF00072 Response regulator receiver domain BM525_04185 PF00990 Diguanylate cyclase, GGDEF domain BM525_04190 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BM525_04190 PF14489 QueF-like protein BM525_04195 PF07348 Syd protein (SUKH-2) BM525_04230 PF00849 RNA pseudouridylate synthase BM525_04235 PF00258 Flavodoxin BM525_04240 PF14602 Hexapeptide repeat of succinyl-transferase BM525_04240 PF00132 Bacterial transferase hexapeptide (six repeats) BM525_04240 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BM525_04245 PF01909 Nucleotidyltransferase domain BM525_04245 PF01966 HD domain BM525_04245 PF01842 ACT domain BM525_04245 PF08335 GlnD PII-uridylyltransferase BM525_04250 PF00557 Metallopeptidase family M24 BM525_04255 PF00318 Ribosomal protein S2 BM525_04260 PF00889 Elongation factor TS BM525_04265 PF00696 Amino acid kinase family BM525_04270 PF01765 Ribosome recycling factor BM525_04275 PF01255 Putative undecaprenyl diphosphate synthase BM525_04285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BM525_04285 PF13288 DXP reductoisomerase C-terminal domain BM525_04285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BM525_04290 PF02163 Peptidase family M50 BM525_04290 PF17820 PDZ domain BM525_04295 PF01103 Surface antigen BM525_04295 PF07244 Surface antigen variable number repeat BM525_04300 PF03938 Outer membrane protein (OmpH-like) BM525_04305 PF07977 FabA-like domain BM525_04310 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BM525_04310 PF00132 Bacterial transferase hexapeptide (six repeats) BM525_04315 PF02684 Lipid-A-disaccharide synthetase BM525_04320 PF01351 Ribonuclease HII BM525_04325 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM525_04325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM525_04325 PF02811 PHP domain BM525_04325 PF01336 OB-fold nucleic acid binding domain BM525_04325 PF14579 Helix-hairpin-helix motif BM525_04330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BM525_04335 PF01171 PP-loop family BM525_04335 PF09179 TilS substrate binding domain BM525_04335 PF11734 TilS substrate C-terminal domain BM525_04340 PF00990 Diguanylate cyclase, GGDEF domain BM525_04340 PF00563 EAL domain BM525_04340 PF03707 Bacterial signalling protein N terminal repeat BM525_04345 PF00999 Sodium/hydrogen exchanger family BM525_04345 PF02080 TrkA-C domain BM525_04345 PF02254 TrkA-N domain BM525_04355 PF14437 MafB19-like deaminase BM525_04360 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM525_04360 PF01464 Transglycosylase SLT domain BM525_04365 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BM525_04365 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BM525_04365 PF02769 AIR synthase related protein, C-terminal domain BM525_04370 PF01713 Smr domain BM525_04390 PF00691 OmpA family BM525_04390 PF05736 OprF membrane domain BM525_04395 PF03412 Peptidase C39 family BM525_04395 PF00664 ABC transporter transmembrane region BM525_04395 PF00005 ABC transporter BM525_04400 PF00529 HlyD membrane-fusion protein of T1SS BM525_04400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM525_04405 PF00072 Response regulator receiver domain BM525_04405 PF00196 Bacterial regulatory proteins, luxR family BM525_04445 PF00072 Response regulator receiver domain BM525_04445 PF01584 CheW-like domain BM525_04450 PF03705 CheR methyltransferase, all-alpha domain BM525_04450 PF01739 CheR methyltransferase, SAM binding domain BM525_04455 PF00460 Flagella basal body rod protein BM525_04460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM525_04460 PF00460 Flagella basal body rod protein BM525_04465 PF03963 Flagellar hook capping protein - N-terminal region BM525_04465 PF13861 FlgD Tudor-like domain BM525_04465 PF13860 FlgD Ig-like domain BM525_04470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM525_04470 PF07559 Flagellar basal body protein FlaE BM525_04470 PF00460 Flagella basal body rod protein BM525_04475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM525_04475 PF00460 Flagella basal body rod protein BM525_04480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM525_04480 PF00460 Flagella basal body rod protein BM525_04485 PF02107 Flagellar L-ring protein BM525_04490 PF02119 Flagellar P-ring protein BM525_04495 PF10135 Rod binding protein BM525_04495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BM525_04515 PF00700 Bacterial flagellin C-terminal helical region BM525_04515 PF07196 Flagellin hook IN motif BM525_04515 PF00669 Bacterial flagellin N-terminal helical region BM525_04520 PF07196 Flagellin hook IN motif BM525_04520 PF00700 Bacterial flagellin C-terminal helical region BM525_04520 PF00669 Bacterial flagellin N-terminal helical region BM525_04525 PF00700 Bacterial flagellin C-terminal helical region BM525_04525 PF07196 Flagellin hook IN motif BM525_04525 PF00669 Bacterial flagellin N-terminal helical region BM525_04530 PF03646 FlaG protein BM525_04535 PF07196 Flagellin hook IN motif BM525_04535 PF07195 Flagellar hook-associated protein 2 C-terminus BM525_04535 PF02465 Flagellar hook-associated protein 2 N-terminus BM525_04540 PF02561 Flagellar protein FliS BM525_04555 PF01370 NAD dependent epimerase/dehydratase family BM525_04560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM525_04565 PF08889 WbqC-like protein family BM525_04575 PF02350 UDP-N-acetylglucosamine 2-epimerase BM525_04590 PF02585 GlcNAc-PI de-N-acetylase BM525_04600 PF08666 SAF domain BM525_04600 PF03102 NeuB family BM525_04610 PF00483 Nucleotidyl transferase BM525_04615 PF02348 Cytidylyltransferase BM525_04625 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BM525_04635 PF13193 AMP-binding enzyme C-terminal domain BM525_04635 PF00501 AMP-binding enzyme BM525_04635 PF16177 Acetyl-coenzyme A synthetase N-terminus BM525_04650 PF08666 SAF domain BM525_04650 PF03102 NeuB family BM525_04660 PF02348 Cytidylyltransferase BM525_04665 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM525_04670 PF02719 Polysaccharide biosynthesis protein BM525_04675 PF01467 Cytidylyltransferase-like BM525_04680 PF00669 Bacterial flagellin N-terminal helical region BM525_04680 PF00700 Bacterial flagellin C-terminal helical region BM525_04685 PF00158 Sigma-54 interaction domain BM525_04685 PF02954 Bacterial regulatory protein, Fis family BM525_04685 PF00072 Response regulator receiver domain BM525_04690 PF00989 PAS fold BM525_04690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_04690 PF00512 His Kinase A (phospho-acceptor) domain BM525_04695 PF00158 Sigma-54 interaction domain BM525_04695 PF00072 Response regulator receiver domain BM525_04695 PF02954 Bacterial regulatory protein, Fis family BM525_04700 PF02049 Flagellar hook-basal body complex protein FliE BM525_04705 PF08345 Flagellar M-ring protein C-terminal BM525_04705 PF01514 Secretory protein of YscJ/FliF family BM525_04710 PF14841 FliG middle domain BM525_04710 PF01706 FliG C-terminal domain BM525_04710 PF14842 FliG N-terminal domain BM525_04720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM525_04720 PF18269 T3SS EscN ATPase C-terminal domain BM525_04740 PF02154 Flagellar motor switch protein FliM BM525_04740 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BM525_04745 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BM525_04750 PF04347 Flagellar biosynthesis protein, FliO BM525_04755 PF00813 FliP family BM525_04760 PF01313 Bacterial export proteins, family 3 BM525_04765 PF01311 Bacterial export proteins, family 1 BM525_04770 PF01312 FlhB HrpN YscU SpaS Family BM525_04775 PF00771 FHIPEP family BM525_04780 PF00448 SRP54-type protein, GTPase domain BM525_04785 PF10609 NUBPL iron-transfer P-loop NTPase BM525_04790 PF04545 Sigma-70, region 4 BM525_04790 PF04542 Sigma-70 region 2 BM525_04790 PF04539 Sigma-70 region 3 BM525_04795 PF00072 Response regulator receiver domain BM525_04800 PF04344 Chemotaxis phosphatase, CheZ BM525_04805 PF02895 Signal transducing histidine kinase, homodimeric domain BM525_04805 PF01584 CheW-like domain BM525_04805 PF07194 P2 response regulator binding domain BM525_04805 PF01627 Hpt domain BM525_04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_04810 PF01339 CheB methylesterase BM525_04810 PF00072 Response regulator receiver domain BM525_04815 PF13614 AAA domain BM525_04825 PF01584 CheW-like domain BM525_04835 PF04204 Homoserine O-succinyltransferase BM525_04840 PF02607 B12 binding domain BM525_04840 PF02310 B12 binding domain BM525_04840 PF02574 Homocysteine S-methyltransferase BM525_04840 PF00809 Pterin binding enzyme BM525_04840 PF02965 Vitamin B12 dependent methionine synthase, activation domain BM525_04845 PF02574 Homocysteine S-methyltransferase BM525_04845 PF02607 B12 binding domain BM525_04845 PF02310 B12 binding domain BM525_04845 PF02965 Vitamin B12 dependent methionine synthase, activation domain BM525_04845 PF00809 Pterin binding enzyme BM525_04855 PF06865 Pyrimidine/purine nucleoside phosphorylase BM525_04860 PF00672 HAMP domain BM525_04860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_04860 PF02743 Cache domain BM525_04865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_04865 PF03466 LysR substrate binding domain BM525_04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_04870 PF03466 LysR substrate binding domain BM525_04875 PF00484 Carbonic anhydrase BM525_04880 PF01740 STAS domain BM525_04880 PF00916 Sulfate permease family BM525_04890 PF00440 Bacterial regulatory proteins, tetR family BM525_04890 PF13977 BetI-type transcriptional repressor, C-terminal BM525_04895 PF01431 Peptidase family M13 BM525_04895 PF05649 Peptidase family M13 BM525_04905 PF02631 RecX family BM525_04910 PF02272 DHHA1 domain BM525_04910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BM525_04910 PF01411 tRNA synthetases class II (A) BM525_04915 PF02599 Global regulator protein family BM525_04940 PF00364 Biotin-requiring enzyme BM525_04940 PF02436 Conserved carboxylase domain BM525_04940 PF00682 HMGL-like BM525_04945 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BM525_04950 PF00005 ABC transporter BM525_04955 PF00005 ABC transporter BM525_04955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BM525_04960 PF12911 N-terminal TM domain of oligopeptide transport permease C BM525_04960 PF00528 Binding-protein-dependent transport system inner membrane component BM525_04965 PF00528 Binding-protein-dependent transport system inner membrane component BM525_04970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BM525_04975 PF02954 Bacterial regulatory protein, Fis family BM525_04975 PF00158 Sigma-54 interaction domain BM525_04980 PF04012 PspA/IM30 family BM525_04995 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BM525_05000 PF18024 Helix-turn-helix domain BM525_05000 PF00158 Sigma-54 interaction domain BM525_05010 PF02798 Glutathione S-transferase, N-terminal domain BM525_05010 PF14497 Glutathione S-transferase, C-terminal domain BM525_05015 PF01037 Lrp/AsnC ligand binding domain BM525_05020 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM525_05020 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BM525_05035 PF03301 Tryptophan 2,3-dioxygenase BM525_05040 PF00593 TonB dependent receptor BM525_05045 PF07715 TonB-dependent Receptor Plug Domain BM525_05045 PF00593 TonB dependent receptor BM525_05080 PF01618 MotA/TolQ/ExbB proton channel family BM525_05085 PF01618 MotA/TolQ/ExbB proton channel family BM525_05090 PF02472 Biopolymer transport protein ExbD/TolR BM525_05095 PF03544 Gram-negative bacterial TonB protein C-terminal BM525_05105 PF17176 tRNA-binding domain BM525_05105 PF05127 Helicase BM525_05105 PF13718 GNAT acetyltransferase 2 BM525_05105 PF08351 Domain of unknown function (DUF1726) BM525_05130 PF01636 Phosphotransferase enzyme family BM525_05145 PF00583 Acetyltransferase (GNAT) family BM525_05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_05160 PF03466 LysR substrate binding domain BM525_05165 PF07690 Major Facilitator Superfamily BM525_05170 PF00296 Luciferase-like monooxygenase BM525_05175 PF00248 Aldo/keto reductase family BM525_05185 PF00072 Response regulator receiver domain BM525_05185 PF00990 Diguanylate cyclase, GGDEF domain BM525_05190 PF03144 Elongation factor Tu domain 2 BM525_05190 PF00009 Elongation factor Tu GTP binding domain BM525_05190 PF16658 Class II release factor RF3, C-terminal domain BM525_05195 PF00750 tRNA synthetases class I (R) BM525_05195 PF03485 Arginyl tRNA synthetase N terminal domain BM525_05195 PF05746 DALR anticodon binding domain BM525_05215 PF00291 Pyridoxal-phosphate dependent enzyme BM525_05240 PF00487 Fatty acid desaturase BM525_05245 PF00970 Oxidoreductase FAD-binding domain BM525_05245 PF00175 Oxidoreductase NAD-binding domain BM525_05245 PF00042 Globin BM525_05255 PF00472 RF-1 domain BM525_05255 PF03462 PCRF domain BM525_05260 PF00152 tRNA synthetases class II (D, K and N) BM525_05260 PF01336 OB-fold nucleic acid binding domain BM525_05265 PF08546 Ketopantoate reductase PanE/ApbA C terminal BM525_05265 PF02558 Ketopantoate reductase PanE/ApbA BM525_05270 PF00849 RNA pseudouridylate synthase BM525_05280 PF05193 Peptidase M16 inactive domain BM525_05280 PF00675 Insulinase (Peptidase family M16) BM525_05285 PF04262 Glutamate-cysteine ligase BM525_05300 PF01713 Smr domain BM525_05305 PF05175 Methyltransferase small domain BM525_05310 PF01264 Chorismate synthase BM525_05320 PF04293 SpoVR like protein BM525_05325 PF04285 Protein of unknown function (DUF444) BM525_05330 PF06798 PrkA serine protein kinase C-terminal domain BM525_05330 PF08298 PrkA AAA domain BM525_05340 PF00462 Glutaredoxin BM525_05345 PF07715 TonB-dependent Receptor Plug Domain BM525_05345 PF00593 TonB dependent receptor BM525_05365 PF04324 BFD-like [2Fe-2S] binding domain BM525_05370 PF00578 AhpC/TSA family BM525_05370 PF10417 C-terminal domain of 1-Cys peroxiredoxin BM525_05375 PF00929 Exonuclease BM525_05380 PF00691 OmpA family BM525_05380 PF18393 MotY N-terminal domain BM525_05385 PF03009 Glycerophosphoryl diester phosphodiesterase family BM525_05390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM525_05395 PF00313 'Cold-shock' DNA-binding domain BM525_05405 PF04389 Peptidase family M28 BM525_05405 PF02225 PA domain BM525_05410 PF00730 HhH-GPD superfamily base excision DNA repair protein BM525_05410 PF00633 Helix-hairpin-helix motif BM525_05415 PF02508 Rnf-Nqr subunit, membrane protein BM525_05420 PF04205 FMN-binding domain BM525_05425 PF03116 NQR2, RnfD, RnfE family BM525_05430 PF12838 4Fe-4S dicluster domain BM525_05430 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BM525_05430 PF13375 RnfC Barrel sandwich hybrid domain BM525_05430 PF10531 SLBB domain BM525_05435 PF04060 Putative Fe-S cluster BM525_05455 PF01554 MatE BM525_05460 PF00271 Helicase conserved C-terminal domain BM525_05460 PF17757 UvrB interaction domain BM525_05460 PF12344 Ultra-violet resistance protein B BM525_05460 PF02151 UvrB/uvrC motif BM525_05460 PF04851 Type III restriction enzyme, res subunit BM525_05470 PF06508 Queuosine biosynthesis protein QueC BM525_05475 PF04055 Radical SAM superfamily BM525_05485 PF13537 Glutamine amidotransferase domain BM525_05485 PF00733 Asparagine synthase BM525_05510 PF03600 Citrate transporter BM525_05510 PF02080 TrkA-C domain BM525_05515 PF00009 Elongation factor Tu GTP binding domain BM525_05520 PF00459 Inositol monophosphatase family BM525_05530 PF01507 Phosphoadenosine phosphosulfate reductase family BM525_05535 PF00474 Sodium:solute symporter family BM525_05540 PF00990 Diguanylate cyclase, GGDEF domain BM525_05540 PF17158 Membrane-associated sensor, integral membrane domain BM525_05550 PF08281 Sigma-70, region 4 BM525_05550 PF04542 Sigma-70 region 2 BM525_05565 PF07584 Aerotolerance regulator N-terminal BM525_05565 PF13519 von Willebrand factor type A domain BM525_05570 PF00092 von Willebrand factor type A domain BM525_05580 PF01882 Protein of unknown function DUF58 BM525_05585 PF07726 ATPase family associated with various cellular activities (AAA) BM525_05585 PF17863 AAA lid domain BM525_05590 PF00108 Thiolase, N-terminal domain BM525_05590 PF02803 Thiolase, C-terminal domain BM525_05595 PF00378 Enoyl-CoA hydratase/isomerase BM525_05595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM525_05595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM525_05605 PF00990 Diguanylate cyclase, GGDEF domain BM525_05605 PF00563 EAL domain BM525_05605 PF03707 Bacterial signalling protein N terminal repeat BM525_05610 PF00675 Insulinase (Peptidase family M16) BM525_05610 PF05193 Peptidase M16 inactive domain BM525_05615 PF00300 Histidine phosphatase superfamily (branch 1) BM525_05625 PF01595 Cyclin M transmembrane N-terminal domain BM525_05625 PF00571 CBS domain BM525_05625 PF03471 Transporter associated domain BM525_05630 PF01578 Cytochrome C assembly protein BM525_05635 PF02881 SRP54-type protein, helical bundle domain BM525_05635 PF00448 SRP54-type protein, GTPase domain BM525_05635 PF02978 Signal peptide binding domain BM525_05675 PF00873 AcrB/AcrD/AcrF family BM525_05680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM525_05685 PF00005 ABC transporter BM525_05685 PF00664 ABC transporter transmembrane region BM525_05700 PF00886 Ribosomal protein S16 BM525_05705 PF01782 RimM N-terminal domain BM525_05705 PF05239 PRC-barrel domain BM525_05710 PF01746 tRNA (Guanine-1)-methyltransferase BM525_05715 PF01245 Ribosomal protein L19 BM525_05720 PF03458 UPF0126 domain BM525_05725 PF00378 Enoyl-CoA hydratase/isomerase BM525_05730 PF00793 DAHP synthetase I family BM525_05735 PF02153 Prephenate dehydrogenase BM525_05735 PF01817 Chorismate mutase type II BM525_05740 PF01817 Chorismate mutase type II BM525_05740 PF00800 Prephenate dehydratase BM525_05745 PF00072 Response regulator receiver domain BM525_05750 PF01253 Translation initiation factor SUI1 BM525_05760 PF00072 Response regulator receiver domain BM525_05760 PF00486 Transcriptional regulatory protein, C terminal BM525_05770 PF00990 Diguanylate cyclase, GGDEF domain BM525_05770 PF03707 Bacterial signalling protein N terminal repeat BM525_05770 PF00563 EAL domain BM525_05780 PF00512 His Kinase A (phospho-acceptor) domain BM525_05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_05790 PF00158 Sigma-54 interaction domain BM525_05790 PF00072 Response regulator receiver domain BM525_05795 PF07196 Flagellin hook IN motif BM525_05795 PF00669 Bacterial flagellin N-terminal helical region BM525_05795 PF00700 Bacterial flagellin C-terminal helical region BM525_05810 PF00152 tRNA synthetases class II (D, K and N) BM525_05810 PF01336 OB-fold nucleic acid binding domain BM525_05810 PF02938 GAD domain BM525_05815 PF00293 NUDIX domain BM525_05820 PF02075 Crossover junction endodeoxyribonuclease RuvC BM525_05830 PF05496 Holliday junction DNA helicase RuvB P-loop domain BM525_05830 PF05491 RuvB C-terminal winged helix domain BM525_05830 PF17864 RuvB AAA lid domain BM525_05835 PF03061 Thioesterase superfamily BM525_05840 PF01618 MotA/TolQ/ExbB proton channel family BM525_05845 PF02472 Biopolymer transport protein ExbD/TolR BM525_05855 PF04052 TolB amino-terminal domain BM525_05855 PF07676 WD40-like Beta Propeller Repeat BM525_05860 PF00691 OmpA family BM525_05865 PF13174 Tetratricopeptide repeat BM525_05865 PF16331 TolA binding protein trimerisation BM525_05885 PF02445 Quinolinate synthetase A protein BM525_05900 PF01734 Patatin-like phospholipase BM525_05905 PF08546 Ketopantoate reductase PanE/ApbA C terminal BM525_05905 PF02558 Ketopantoate reductase PanE/ApbA BM525_05915 PF01118 Semialdehyde dehydrogenase, NAD binding domain BM525_05915 PF02774 Semialdehyde dehydrogenase, dimerisation domain BM525_05920 PF00106 short chain dehydrogenase BM525_05925 PF01292 Prokaryotic cytochrome b561 BM525_05940 PF00990 Diguanylate cyclase, GGDEF domain BM525_05940 PF03707 Bacterial signalling protein N terminal repeat BM525_05940 PF00563 EAL domain BM525_05955 PF03466 LysR substrate binding domain BM525_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_05960 PF00107 Zinc-binding dehydrogenase BM525_05960 PF08240 Alcohol dehydrogenase GroES-like domain BM525_05965 PF01863 Protein of unknown function DUF45 BM525_05970 PF00873 AcrB/AcrD/AcrF family BM525_05980 PF08361 MAATS-type transcriptional repressor, C-terminal region BM525_05980 PF00440 Bacterial regulatory proteins, tetR family BM525_05985 PF00593 TonB dependent receptor BM525_05985 PF07715 TonB-dependent Receptor Plug Domain BM525_05995 PF00873 AcrB/AcrD/AcrF family BM525_06005 PF00990 Diguanylate cyclase, GGDEF domain BM525_06015 PF02470 MlaD protein BM525_06020 PF04403 Paraquat-inducible protein A BM525_06035 PF00106 short chain dehydrogenase BM525_06040 PF12833 Helix-turn-helix domain BM525_06040 PF06719 AraC-type transcriptional regulator N-terminus BM525_06045 PF01336 OB-fold nucleic acid binding domain BM525_06045 PF00152 tRNA synthetases class II (D, K and N) BM525_06055 PF01699 Sodium/calcium exchanger protein BM525_06060 PF18030 RimK PreATP-grasp domain BM525_06060 PF08443 RimK-like ATP-grasp domain BM525_06080 PF00202 Aminotransferase class-III BM525_06085 PF06968 Biotin and Thiamin Synthesis associated domain BM525_06085 PF04055 Radical SAM superfamily BM525_06090 PF00155 Aminotransferase class I and II BM525_06095 PF08241 Methyltransferase domain BM525_06105 PF03575 Peptidase family S51 BM525_06110 PF01451 Low molecular weight phosphotyrosine protein phosphatase BM525_06115 PF01032 FecCD transport family BM525_06120 PF00005 ABC transporter BM525_06125 PF01474 Class-II DAHP synthetase family BM525_06140 PF00005 ABC transporter BM525_06140 PF00664 ABC transporter transmembrane region BM525_06145 PF06463 Molybdenum Cofactor Synthesis C BM525_06145 PF04055 Radical SAM superfamily BM525_06155 PF00072 Response regulator receiver domain BM525_06155 PF00486 Transcriptional regulatory protein, C terminal BM525_06175 PF00749 tRNA synthetases class I (E and Q), catalytic domain BM525_06205 PF01207 Dihydrouridine synthase (Dus) BM525_06220 PF13472 GDSL-like Lipase/Acylhydrolase family BM525_06225 PF00005 ABC transporter BM525_06235 PF01370 NAD dependent epimerase/dehydratase family BM525_06235 PF08338 Domain of unknown function (DUF1731) BM525_06240 PF02152 Dihydroneopterin aldolase BM525_06245 PF01594 AI-2E family transporter BM525_06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_06250 PF08918 PhoQ Sensor BM525_06255 PF00072 Response regulator receiver domain BM525_06255 PF00486 Transcriptional regulatory protein, C terminal BM525_06270 PF03795 YCII-related domain BM525_06275 PF00290 Tryptophan synthase alpha chain BM525_06280 PF00291 Pyridoxal-phosphate dependent enzyme BM525_06285 PF00218 Indole-3-glycerol phosphate synthase BM525_06285 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BM525_06290 PF02885 Glycosyl transferase family, helical bundle domain BM525_06290 PF00591 Glycosyl transferase family, a/b domain BM525_06295 PF00117 Glutamine amidotransferase class-I BM525_06300 PF04715 Anthranilate synthase component I, N terminal region BM525_06300 PF00425 chorismate binding enzyme BM525_06305 PF02811 PHP domain BM525_06310 PF01300 Telomere recombination BM525_06315 PF02616 Segregation and condensation protein ScpA BM525_06320 PF04079 Segregation and condensation complex subunit ScpB BM525_06325 PF01479 S4 domain BM525_06325 PF00849 RNA pseudouridylate synthase BM525_06330 PF00248 Aldo/keto reductase family BM525_06335 PF12464 Maltose acetyltransferase BM525_06335 PF14602 Hexapeptide repeat of succinyl-transferase BM525_06345 PF04286 Protein of unknown function (DUF445) BM525_06360 PF00664 ABC transporter transmembrane region BM525_06360 PF00005 ABC transporter BM525_06365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM525_06365 PF00529 HlyD membrane-fusion protein of T1SS BM525_06370 PF05724 Thiopurine S-methyltransferase (TPMT) BM525_06375 PF04355 SmpA / OmlA family BM525_06380 PF02463 RecF/RecN/SMC N terminal domain BM525_06385 PF00210 Ferritin-like domain BM525_06395 PF00465 Iron-containing alcohol dehydrogenase BM525_06410 PF00561 alpha/beta hydrolase fold BM525_06420 PF00593 TonB dependent receptor BM525_06420 PF07715 TonB-dependent Receptor Plug Domain BM525_06425 PF00196 Bacterial regulatory proteins, luxR family BM525_06425 PF00072 Response regulator receiver domain BM525_06430 PF00512 His Kinase A (phospho-acceptor) domain BM525_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_06430 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM525_06430 PF00072 Response regulator receiver domain BM525_06430 PF01627 Hpt domain BM525_06450 PF01025 GrpE BM525_06455 PF00012 Hsp70 protein BM525_06460 PF00226 DnaJ domain BM525_06460 PF00684 DnaJ central domain BM525_06460 PF01556 DnaJ C terminal domain BM525_06465 PF01322 Cytochrome C' BM525_06475 PF16177 Acetyl-coenzyme A synthetase N-terminus BM525_06475 PF13193 AMP-binding enzyme C-terminal domain BM525_06475 PF00501 AMP-binding enzyme BM525_06485 PF01113 Dihydrodipicolinate reductase, N-terminus BM525_06485 PF05173 Dihydrodipicolinate reductase, C-terminus BM525_06490 PF00117 Glutamine amidotransferase class-I BM525_06490 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BM525_06495 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BM525_06495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BM525_06495 PF02142 MGS-like domain BM525_06500 PF03449 Transcription elongation factor, N-terminal BM525_06500 PF01272 Transcription elongation factor, GreA/GreB, C-term BM525_06515 PF00011 Hsp20/alpha crystallin family BM525_06520 PF00871 Acetokinase family BM525_06525 PF01515 Phosphate acetyl/butaryl transferase BM525_06525 PF07085 DRTGG domain BM525_06540 PF00795 Carbon-nitrogen hydrolase BM525_06545 PF03471 Transporter associated domain BM525_06545 PF00571 CBS domain BM525_06550 PF02130 Uncharacterized protein family UPF0054 BM525_06555 PF02562 PhoH-like protein BM525_06560 PF01938 TRAM domain BM525_06560 PF04055 Radical SAM superfamily BM525_06560 PF00919 Uncharacterized protein family UPF0004 BM525_06565 PF01494 FAD binding domain BM525_06590 PF00593 TonB dependent receptor BM525_06590 PF07715 TonB-dependent Receptor Plug Domain BM525_06595 PF03061 Thioesterase superfamily BM525_06600 PF01613 Flavin reductase like domain BM525_06610 PF01235 Sodium:alanine symporter family BM525_06645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BM525_06650 PF06071 Protein of unknown function (DUF933) BM525_06650 PF01926 50S ribosome-binding GTPase BM525_06655 PF01195 Peptidyl-tRNA hydrolase BM525_06660 PF01386 Ribosomal L25p family BM525_06660 PF14693 Ribosomal protein TL5, C-terminal domain BM525_06665 PF00107 Zinc-binding dehydrogenase BM525_06665 PF08240 Alcohol dehydrogenase GroES-like domain BM525_06680 PF14572 Phosphoribosyl synthetase-associated domain BM525_06680 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BM525_06690 PF08544 GHMP kinases C terminal BM525_06690 PF00288 GHMP kinases N terminal domain BM525_06695 PF03550 Outer membrane lipoprotein LolB BM525_06700 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BM525_06700 PF01488 Shikimate / quinate 5-dehydrogenase BM525_06700 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BM525_06705 PF03462 PCRF domain BM525_06705 PF00472 RF-1 domain BM525_06710 PF13847 Methyltransferase domain BM525_06710 PF17827 PrmC N-terminal domain BM525_06715 PF11849 Domain of unknown function (DUF3369) BM525_06720 PF04247 Invasion gene expression up-regulator, SirB BM525_06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_06735 PF03466 LysR substrate binding domain BM525_06745 PF04241 Protein of unknown function (DUF423) BM525_06750 PF01728 FtsJ-like methyltransferase BM525_06750 PF18125 RlmM ferredoxin-like domain BM525_06755 PF03144 Elongation factor Tu domain 2 BM525_06755 PF00009 Elongation factor Tu GTP binding domain BM525_06755 PF03764 Elongation factor G, domain IV BM525_06755 PF14492 Elongation Factor G, domain II BM525_06755 PF00679 Elongation factor G C-terminus BM525_06760 PF02560 Cyanate lyase C-terminal domain BM525_06765 PF00069 Protein kinase domain BM525_06770 PF01226 Formate/nitrite transporter BM525_06775 PF13559 Domain of unknown function (DUF4129) BM525_06775 PF01841 Transglutaminase-like superfamily BM525_06775 PF11992 Domain of unknown function (DUF3488) BM525_06785 PF07726 ATPase family associated with various cellular activities (AAA) BM525_06785 PF17863 AAA lid domain BM525_06790 PF17206 SeqA protein N-terminal domain BM525_06790 PF03925 SeqA protein C-terminal domain BM525_06795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM525_06795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM525_06795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM525_06795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM525_06800 PF00343 Carbohydrate phosphorylase BM525_06805 PF00990 Diguanylate cyclase, GGDEF domain BM525_06805 PF03707 Bacterial signalling protein N terminal repeat BM525_06805 PF00563 EAL domain BM525_06810 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BM525_06820 PF01906 Putative heavy-metal-binding BM525_06825 PF00375 Sodium:dicarboxylate symporter family BM525_06840 PF07687 Peptidase dimerisation domain BM525_06840 PF01546 Peptidase family M20/M25/M40 BM525_06845 PF03960 ArsC family BM525_06850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BM525_06865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM525_06870 PF04209 homogentisate 1,2-dioxygenase BM525_06890 PF00091 Tubulin/FtsZ family, GTPase domain BM525_06890 PF12327 FtsZ family, C-terminal domain BM525_06900 PF00990 Diguanylate cyclase, GGDEF domain BM525_06900 PF03707 Bacterial signalling protein N terminal repeat BM525_06900 PF00563 EAL domain BM525_06905 PF00563 EAL domain BM525_06905 PF00990 Diguanylate cyclase, GGDEF domain BM525_06905 PF03707 Bacterial signalling protein N terminal repeat BM525_06910 PF00873 AcrB/AcrD/AcrF family BM525_06920 PF00999 Sodium/hydrogen exchanger family BM525_06920 PF02254 TrkA-N domain BM525_06925 PF02525 Flavodoxin-like fold BM525_06935 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM525_06940 PF00111 2Fe-2S iron-sulfur cluster binding domain BM525_06940 PF01799 [2Fe-2S] binding domain BM525_06945 PF01638 HxlR-like helix-turn-helix BM525_06950 PF00990 Diguanylate cyclase, GGDEF domain BM525_06950 PF05231 MASE1 BM525_06950 PF08447 PAS fold BM525_06950 PF00563 EAL domain BM525_06950 PF13426 PAS domain BM525_06950 PF08448 PAS fold BM525_06960 PF01979 Amidohydrolase family BM525_06965 PF00576 HIUase/Transthyretin family BM525_06980 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM525_06980 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM525_06985 PF01799 [2Fe-2S] binding domain BM525_06985 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM525_06985 PF00111 2Fe-2S iron-sulfur cluster binding domain BM525_06985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM525_06995 PF00440 Bacterial regulatory proteins, tetR family BM525_06995 PF08362 YcdC-like protein, C-terminal region BM525_07010 PF00860 Permease family BM525_07015 PF00962 Adenosine/AMP deaminase BM525_07025 PF00563 EAL domain BM525_07025 PF00990 Diguanylate cyclase, GGDEF domain BM525_07025 PF03707 Bacterial signalling protein N terminal repeat BM525_07030 PF00563 EAL domain BM525_07030 PF01590 GAF domain BM525_07030 PF00360 Phytochrome region BM525_07030 PF00990 Diguanylate cyclase, GGDEF domain BM525_07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_07035 PF00512 His Kinase A (phospho-acceptor) domain BM525_07035 PF00072 Response regulator receiver domain BM525_07035 PF09308 LuxQ, periplasmic BM525_07040 PF00593 TonB dependent receptor BM525_07040 PF07715 TonB-dependent Receptor Plug Domain BM525_07045 PF00860 Permease family BM525_07055 PF07687 Peptidase dimerisation domain BM525_07055 PF01546 Peptidase family M20/M25/M40 BM525_07060 PF00266 Aminotransferase class-V BM525_07065 PF01925 Sulfite exporter TauE/SafE BM525_07075 PF01425 Amidase BM525_07115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BM525_07115 PF03129 Anticodon binding domain BM525_07115 PF02824 TGS domain BM525_07115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BM525_07120 PF05198 Translation initiation factor IF-3, N-terminal domain BM525_07120 PF00707 Translation initiation factor IF-3, C-terminal domain BM525_07125 PF01632 Ribosomal protein L35 BM525_07130 PF00453 Ribosomal protein L20 BM525_07140 PF02397 Bacterial sugar transferase BM525_07150 PF02563 Polysaccharide biosynthesis/export protein BM525_07150 PF10531 SLBB domain BM525_07150 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BM525_07155 PF13614 AAA domain BM525_07185 PF03707 Bacterial signalling protein N terminal repeat BM525_07185 PF00563 EAL domain BM525_07185 PF00990 Diguanylate cyclase, GGDEF domain BM525_07195 PF00534 Glycosyl transferases group 1 BM525_07195 PF13439 Glycosyltransferase Family 4 BM525_07205 PF13477 Glycosyl transferase 4-like BM525_07205 PF00534 Glycosyl transferases group 1 BM525_07210 PF00535 Glycosyl transferase family 2 BM525_07215 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BM525_07215 PF00535 Glycosyl transferase family 2 BM525_07225 PF00534 Glycosyl transferases group 1 BM525_07225 PF13439 Glycosyltransferase Family 4 BM525_07230 PF04230 Polysaccharide pyruvyl transferase BM525_07250 PF13579 Glycosyl transferase 4-like domain BM525_07250 PF00534 Glycosyl transferases group 1 BM525_07255 PF00535 Glycosyl transferase family 2 BM525_07260 PF01757 Acyltransferase family BM525_07275 PF01409 tRNA synthetases class II core domain (F) BM525_07275 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BM525_07280 PF01588 Putative tRNA binding domain BM525_07280 PF03484 tRNA synthetase B5 domain BM525_07280 PF03483 B3/4 domain BM525_07280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BM525_07280 PF03147 Ferredoxin-fold anticodon binding domain BM525_07285 PF00216 Bacterial DNA-binding protein BM525_07295 PF04073 Aminoacyl-tRNA editing domain BM525_07300 PF01804 Penicillin amidase BM525_07305 PF00933 Glycosyl hydrolase family 3 N terminal domain BM525_07310 PF01923 Cobalamin adenosyltransferase BM525_07320 PF00270 DEAD/DEAH box helicase BM525_07320 PF02559 CarD-like/TRCF domain BM525_07320 PF03461 TRCF domain BM525_07320 PF17757 UvrB interaction domain BM525_07320 PF00271 Helicase conserved C-terminal domain BM525_07330 PF12704 MacB-like periplasmic core domain BM525_07330 PF02687 FtsX-like permease family BM525_07340 PF00072 Response regulator receiver domain BM525_07340 PF13188 PAS domain BM525_07340 PF08448 PAS fold BM525_07340 PF00512 His Kinase A (phospho-acceptor) domain BM525_07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_07355 PF03372 Endonuclease/Exonuclease/phosphatase family BM525_07390 PF07690 Major Facilitator Superfamily BM525_07400 PF00483 Nucleotidyl transferase BM525_07420 PF00682 HMGL-like BM525_07425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BM525_07425 PF00289 Biotin carboxylase, N-terminal domain BM525_07425 PF02785 Biotin carboxylase C-terminal domain BM525_07425 PF00364 Biotin-requiring enzyme BM525_07430 PF00378 Enoyl-CoA hydratase/isomerase BM525_07435 PF01039 Carboxyl transferase domain BM525_07440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_07440 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_07440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM525_07445 PF13411 MerR HTH family regulatory protein BM525_07450 PF02803 Thiolase, C-terminal domain BM525_07450 PF00108 Thiolase, N-terminal domain BM525_07460 PF00266 Aminotransferase class-V BM525_07465 PF17151 Periplasmic sensor domain BM525_07465 PF00990 Diguanylate cyclase, GGDEF domain BM525_07475 PF08411 Exonuclease C-terminal BM525_07475 PF00929 Exonuclease BM525_07480 PF01627 Hpt domain BM525_07480 PF00672 HAMP domain BM525_07480 PF00072 Response regulator receiver domain BM525_07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_07480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM525_07480 PF00512 His Kinase A (phospho-acceptor) domain BM525_07485 PF01112 Asparaginase BM525_07495 PF02333 Phytase BM525_07525 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BM525_07525 PF00271 Helicase conserved C-terminal domain BM525_07525 PF04408 Helicase associated domain (HA2) BM525_07525 PF11898 Domain of unknown function (DUF3418) BM525_07525 PF00270 DEAD/DEAH box helicase BM525_07540 PF10672 S-adenosylmethionine-dependent methyltransferase BM525_07540 PF17785 PUA-like domain BM525_07545 PF02801 Beta-ketoacyl synthase, C-terminal domain BM525_07545 PF08659 KR domain BM525_07545 PF16197 Ketoacyl-synthetase C-terminal extension BM525_07545 PF00550 Phosphopantetheine attachment site BM525_07545 PF00109 Beta-ketoacyl synthase, N-terminal domain BM525_07545 PF14765 Polyketide synthase dehydratase BM525_07545 PF00698 Acyl transferase domain BM525_07545 PF08240 Alcohol dehydrogenase GroES-like domain BM525_07550 PF00075 RNase H BM525_07555 PF00929 Exonuclease BM525_07575 PF12792 CSS motif domain associated with EAL BM525_07575 PF00563 EAL domain BM525_07580 PF00005 ABC transporter BM525_07585 PF12704 MacB-like periplasmic core domain BM525_07585 PF02687 FtsX-like permease family BM525_07590 PF00375 Sodium:dicarboxylate symporter family BM525_07600 PF04996 Succinylarginine dihydrolase BM525_07610 PF01396 Topoisomerase DNA binding C4 zinc finger BM525_07610 PF01751 Toprim domain BM525_07610 PF08272 Topoisomerase I zinc-ribbon-like BM525_07610 PF01131 DNA topoisomerase BM525_07625 PF12804 MobA-like NTP transferase domain BM525_07630 PF02634 FdhD/NarQ family BM525_07635 PF00384 Molybdopterin oxidoreductase BM525_07645 PF02798 Glutathione S-transferase, N-terminal domain BM525_07655 PF03466 LysR substrate binding domain BM525_07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_07660 PF13673 Acetyltransferase (GNAT) domain BM525_07665 PF13419 Haloacid dehalogenase-like hydrolase BM525_07675 PF12111 Polyribonucleotide phosphorylase C terminal BM525_07675 PF10150 Ribonuclease E/G family BM525_07675 PF00575 S1 RNA binding domain BM525_07680 PF01479 S4 domain BM525_07680 PF00849 RNA pseudouridylate synthase BM525_07685 PF13419 Haloacid dehalogenase-like hydrolase BM525_07690 PF02545 Maf-like protein BM525_07695 PF02620 Large ribosomal RNA subunit accumulation protein YceD BM525_07700 PF01783 Ribosomal L32p protein family BM525_07705 PF02504 Fatty acid synthesis protein BM525_07710 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BM525_07710 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BM525_07715 PF00698 Acyl transferase domain BM525_07725 PF00550 Phosphopantetheine attachment site BM525_07730 PF00109 Beta-ketoacyl synthase, N-terminal domain BM525_07730 PF02801 Beta-ketoacyl synthase, C-terminal domain BM525_07735 PF01063 Amino-transferase class IV BM525_07740 PF02618 YceG-like family BM525_07745 PF02223 Thymidylate kinase BM525_07750 PF09115 DNA polymerase III, delta subunit, C terminal BM525_07755 PF01026 TatD related DNase BM525_07765 PF13460 NAD(P)H-binding BM525_07770 PF00990 Diguanylate cyclase, GGDEF domain BM525_07770 PF00072 Response regulator receiver domain BM525_07795 PF00561 alpha/beta hydrolase fold BM525_07800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM525_07800 PF00378 Enoyl-CoA hydratase/isomerase BM525_07800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM525_07805 PF00108 Thiolase, N-terminal domain BM525_07805 PF02803 Thiolase, C-terminal domain BM525_07810 PF12806 Acetyl-CoA dehydrogenase C-terminal like BM525_07810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM525_07810 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_07810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_07825 PF04198 Putative sugar-binding domain BM525_07830 PF13419 Haloacid dehalogenase-like hydrolase BM525_07840 PF01232 Mannitol dehydrogenase Rossmann domain BM525_07840 PF08125 Mannitol dehydrogenase C-terminal domain BM525_07850 PF03466 LysR substrate binding domain BM525_07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_07855 PF01575 MaoC like domain BM525_07865 PF00924 Mechanosensitive ion channel BM525_07870 PF00593 TonB dependent receptor BM525_07870 PF07715 TonB-dependent Receptor Plug Domain BM525_07875 PF01329 Pterin 4 alpha carbinolamine dehydratase BM525_07895 PF00072 Response regulator receiver domain BM525_07895 PF01627 Hpt domain BM525_07895 PF00512 His Kinase A (phospho-acceptor) domain BM525_07895 PF17149 Periplasmic sensor domain found in signal transduction proteins BM525_07895 PF00672 HAMP domain BM525_07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_07900 PF00072 Response regulator receiver domain BM525_07905 PF02576 RimP N-terminal domain BM525_07905 PF17384 RimP C-terminal SH3 domain BM525_07910 PF00575 S1 RNA binding domain BM525_07910 PF13184 NusA-like KH domain BM525_07910 PF08529 NusA N-terminal domain BM525_07915 PF11987 Translation-initiation factor 2 BM525_07915 PF08364 Bacterial translation initiation factor IF-2 associated region BM525_07915 PF00009 Elongation factor Tu GTP binding domain BM525_07915 PF04760 Translation initiation factor IF-2, N-terminal region BM525_07920 PF02033 Ribosome-binding factor A BM525_07925 PF09157 Pseudouridine synthase II TruB, C-terminal BM525_07925 PF01509 TruB family pseudouridylate synthase (N terminal domain) BM525_07925 PF16198 tRNA pseudouridylate synthase B C-terminal domain BM525_07935 PF00312 Ribosomal protein S15 BM525_07940 PF03707 Bacterial signalling protein N terminal repeat BM525_07940 PF00990 Diguanylate cyclase, GGDEF domain BM525_07940 PF00563 EAL domain BM525_07945 PF00849 RNA pseudouridylate synthase BM525_07945 PF01479 S4 domain BM525_07955 PF00583 Acetyltransferase (GNAT) family BM525_07955 PF00795 Carbon-nitrogen hydrolase BM525_07985 PF10417 C-terminal domain of 1-Cys peroxiredoxin BM525_07985 PF00578 AhpC/TSA family BM525_07990 PF13192 Thioredoxin domain BM525_07990 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_08030 PF08497 Radical SAM N-terminal BM525_08030 PF11842 Domain of unknown function (DUF3362) BM525_08030 PF04055 Radical SAM superfamily BM525_08045 PF07715 TonB-dependent Receptor Plug Domain BM525_08045 PF00593 TonB dependent receptor BM525_08050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM525_08050 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_08060 PF13416 Bacterial extracellular solute-binding protein BM525_08070 PF00005 ABC transporter BM525_08075 PF01066 CDP-alcohol phosphatidyltransferase BM525_08095 PF00990 Diguanylate cyclase, GGDEF domain BM525_08095 PF00563 EAL domain BM525_08095 PF00360 Phytochrome region BM525_08095 PF01590 GAF domain BM525_08115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_08115 PF03466 LysR substrate binding domain BM525_08135 PF00005 ABC transporter BM525_08145 PF00106 short chain dehydrogenase BM525_08150 PF01370 NAD dependent epimerase/dehydratase family BM525_08155 PF01758 Sodium Bile acid symporter family BM525_08215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM525_08220 PF01668 SmpB protein BM525_08225 PF03364 Polyketide cyclase / dehydrase and lipid transport BM525_08230 PF03658 RnfH family Ubiquitin BM525_08240 PF02028 BCCT, betaine/carnitine/choline family transporter BM525_08245 PF00593 TonB dependent receptor BM525_08245 PF07715 TonB-dependent Receptor Plug Domain BM525_08250 PF13181 Tetratricopeptide repeat BM525_08260 PF03618 Kinase/pyrophosphorylase BM525_08265 PF00391 PEP-utilising enzyme, mobile domain BM525_08265 PF02896 PEP-utilising enzyme, TIM barrel domain BM525_08265 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BM525_08275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM525_08280 PF01799 [2Fe-2S] binding domain BM525_08280 PF00111 2Fe-2S iron-sulfur cluster binding domain BM525_08300 PF08007 Cupin superfamily protein BM525_08305 PF00211 Adenylate and Guanylate cyclase catalytic domain BM525_08310 PF08328 Adenylosuccinate lyase C-terminal BM525_08310 PF00206 Lyase BM525_08315 PF04356 Protein of unknown function (DUF489) BM525_08325 PF00849 RNA pseudouridylate synthase BM525_08330 PF03971 Monomeric isocitrate dehydrogenase BM525_08335 PF00313 'Cold-shock' DNA-binding domain BM525_08340 PF02617 ATP-dependent Clp protease adaptor protein ClpS BM525_08345 PF17871 AAA lid domain BM525_08345 PF07724 AAA domain (Cdc48 subfamily) BM525_08345 PF00004 ATPase family associated with various cellular activities (AAA) BM525_08345 PF02861 Clp amino terminal domain, pathogenicity island component BM525_08345 PF10431 C-terminal, D2-small domain, of ClpB protein BM525_08350 PF01176 Translation initiation factor 1A / IF-1 BM525_08355 PF04377 Arginine-tRNA-protein transferase, C terminus BM525_08355 PF04376 Arginine-tRNA-protein transferase, N terminus BM525_08360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BM525_08365 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_08370 PF04217 Protein of unknown function, DUF412 BM525_08375 PF10263 SprT-like family BM525_08375 PF17283 SprT-like zinc ribbon domain BM525_08380 PF01343 Peptidase family S49 BM525_08395 PF00881 Nitroreductase family BM525_08405 PF17763 Glutaminase/Asparaginase C-terminal domain BM525_08405 PF00710 Asparaginase, N-terminal BM525_08410 PF04055 Radical SAM superfamily BM525_08410 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BM525_08415 PF03099 Biotin/lipoate A/B protein ligase family BM525_08420 PF04359 Protein of unknown function (DUF493) BM525_08425 PF00768 D-alanyl-D-alanine carboxypeptidase BM525_08425 PF07943 Penicillin-binding protein 5, C-terminal domain BM525_08430 PF05036 Sporulation related domain BM525_08430 PF03330 Lytic transglycolase BM525_08435 PF01098 Cell cycle protein BM525_08440 PF03717 Penicillin-binding Protein dimerisation domain BM525_08440 PF00905 Penicillin binding protein transpeptidase domain BM525_08445 PF02590 Predicted SPOUT methyltransferase BM525_08455 PF01467 Cytidylyltransferase-like BM525_08460 PF06144 DNA polymerase III, delta subunit BM525_08460 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BM525_08465 PF04390 Lipopolysaccharide-assembly BM525_08470 PF08264 Anticodon-binding domain of tRNA BM525_08470 PF00133 tRNA synthetases class I (I, L, M and V) BM525_08470 PF13603 Leucyl-tRNA synthetase, Domain 2 BM525_08480 PF13654 AAA domain BM525_08480 PF05362 Lon protease (S16) C-terminal proteolytic domain BM525_08485 PF12697 Alpha/beta hydrolase family BM525_08490 PF00990 Diguanylate cyclase, GGDEF domain BM525_08495 PF00106 short chain dehydrogenase BM525_08500 PF01985 CRS1 / YhbY (CRM) domain BM525_08505 PF01728 FtsJ-like methyltransferase BM525_08510 PF00004 ATPase family associated with various cellular activities (AAA) BM525_08510 PF06480 FtsH Extracellular BM525_08510 PF17862 AAA+ lid domain BM525_08510 PF01434 Peptidase family M41 BM525_08515 PF00809 Pterin binding enzyme BM525_08520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM525_08520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM525_08520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM525_08520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM525_08525 PF00121 Triosephosphate isomerase BM525_08530 PF03840 Preprotein translocase SecG subunit BM525_08540 PF00563 EAL domain BM525_08540 PF00990 Diguanylate cyclase, GGDEF domain BM525_08540 PF03707 Bacterial signalling protein N terminal repeat BM525_08545 PF01679 Proteolipid membrane potential modulator BM525_08555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BM525_08555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM525_08560 PF00781 Diacylglycerol kinase catalytic domain BM525_08560 PF02142 MGS-like domain BM525_08590 PF00474 Sodium:solute symporter family BM525_08615 PF00575 S1 RNA binding domain BM525_08615 PF03725 3' exoribonuclease family, domain 2 BM525_08615 PF01138 3' exoribonuclease family, domain 1 BM525_08615 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BM525_08615 PF00013 KH domain BM525_08675 PF02567 Phenazine biosynthesis-like protein BM525_08760 PF03544 Gram-negative bacterial TonB protein C-terminal BM525_08780 PF13181 Tetratricopeptide repeat BM525_08780 PF07719 Tetratricopeptide repeat BM525_08795 PF02463 RecF/RecN/SMC N terminal domain BM525_08795 PF06470 SMC proteins Flexible Hinge Domain BM525_08800 PF04354 ZipA, C-terminal FtsZ-binding domain BM525_08805 PF03120 NAD-dependent DNA ligase OB-fold domain BM525_08805 PF00533 BRCA1 C Terminus (BRCT) domain BM525_08805 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BM525_08805 PF12826 Helix-hairpin-helix motif BM525_08805 PF01653 NAD-dependent DNA ligase adenylation domain BM525_08820 PF00005 ABC transporter BM525_08820 PF00664 ABC transporter transmembrane region BM525_08825 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BM525_08830 PF03966 Trm112p-like protein BM525_08835 PF02348 Cytidylyltransferase BM525_08845 PF04055 Radical SAM superfamily BM525_08845 PF18693 TRAM domain BM525_08845 PF00919 Uncharacterized protein family UPF0004 BM525_08860 PF00899 ThiF family BM525_08865 PF13409 Glutathione S-transferase, N-terminal domain BM525_08870 PF05726 Pirin C-terminal cupin domain BM525_08870 PF02678 Pirin BM525_08875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM525_08875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM525_08875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM525_08875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM525_08885 PF00285 Citrate synthase, C-terminal domain BM525_08890 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BM525_08895 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BM525_08900 PF02910 Fumarate reductase flavoprotein C-term BM525_08900 PF00890 FAD binding domain BM525_08905 PF13085 2Fe-2S iron-sulfur cluster binding domain BM525_08910 PF16078 2-oxoglutarate dehydrogenase N-terminus BM525_08910 PF00676 Dehydrogenase E1 component BM525_08910 PF16870 2-oxoglutarate dehydrogenase C-terminal BM525_08910 PF02779 Transketolase, pyrimidine binding domain BM525_08915 PF02817 e3 binding domain BM525_08915 PF00364 Biotin-requiring enzyme BM525_08915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BM525_08920 PF08442 ATP-grasp domain BM525_08920 PF00549 CoA-ligase BM525_08925 PF02629 CoA binding domain BM525_08925 PF00549 CoA-ligase BM525_08950 PF04820 Tryptophan halogenase BM525_08960 PF03714 Bacterial pullanase-associated domain BM525_08960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BM525_08960 PF11852 Domain of unknown function (DUF3372) BM525_08960 PF18494 Pullulanase Ins domain BM525_08960 PF17967 Pullulanase N2 domain BM525_08965 PF01734 Patatin-like phospholipase BM525_08980 PF16657 Maltogenic Amylase, C-terminal domain BM525_08980 PF02903 Alpha amylase, N-terminal ig-like domain BM525_08980 PF00128 Alpha amylase, catalytic domain BM525_08985 PF00128 Alpha amylase, catalytic domain BM525_08985 PF09087 Cyclomaltodextrinase, N-terminal BM525_08985 PF10438 Cyclo-malto-dextrinase C-terminal domain BM525_08995 PF01833 IPT/TIG domain BM525_08995 PF00686 Starch binding domain BM525_08995 PF00128 Alpha amylase, catalytic domain BM525_08995 PF02806 Alpha amylase, C-terminal all-beta domain BM525_09000 PF00356 Bacterial regulatory proteins, lacI family BM525_09005 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BM525_09005 PF00749 tRNA synthetases class I (E and Q), catalytic domain BM525_09010 PF00106 short chain dehydrogenase BM525_09015 PF12262 Bacterial virulence factor lipase N-terminal BM525_09020 PF01804 Penicillin amidase BM525_09025 PF08496 Peptidase family S49 N-terminal BM525_09025 PF01343 Peptidase family S49 BM525_09040 PF01784 NIF3 (NGG1p interacting factor 3) BM525_09050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM525_09050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM525_09055 PF00255 Glutathione peroxidase BM525_09060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BM525_09060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM525_09070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_09070 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_09070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM525_09075 PF00378 Enoyl-CoA hydratase/isomerase BM525_09080 PF13847 Methyltransferase domain BM525_09090 PF00884 Sulfatase BM525_09090 PF11893 Domain of unknown function (DUF3413) BM525_09095 PF07208 Protein of unknown function (DUF1414) BM525_09100 PF04245 37-kD nucleoid-associated bacterial protein BM525_09130 PF07694 5TMR of 5TMR-LYT BM525_09130 PF06580 Histidine kinase BM525_09135 PF00072 Response regulator receiver domain BM525_09135 PF04397 LytTr DNA-binding domain BM525_09140 PF00365 Phosphofructokinase BM525_09150 PF13411 MerR HTH family regulatory protein BM525_09165 PF01545 Cation efflux family BM525_09165 PF16916 Dimerisation domain of Zinc Transporter BM525_09185 PF00873 AcrB/AcrD/AcrF family BM525_09200 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM525_09200 PF00072 Response regulator receiver domain BM525_09200 PF00512 His Kinase A (phospho-acceptor) domain BM525_09200 PF01627 Hpt domain BM525_09200 PF00989 PAS fold BM525_09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_09220 PF00270 DEAD/DEAH box helicase BM525_09220 PF00271 Helicase conserved C-terminal domain BM525_09225 PF01144 Coenzyme A transferase BM525_09230 PF01144 Coenzyme A transferase BM525_09235 PF03466 LysR substrate binding domain BM525_09235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_09250 PF03466 LysR substrate binding domain BM525_09255 PF03313 Serine dehydratase alpha chain BM525_09255 PF03315 Serine dehydratase beta chain BM525_09260 PF00293 NUDIX domain BM525_09265 PF04715 Anthranilate synthase component I, N terminal region BM525_09265 PF00425 chorismate binding enzyme BM525_09275 PF02646 RmuC family BM525_09280 PF00082 Subtilase family BM525_09280 PF05922 Peptidase inhibitor I9 BM525_09280 PF02225 PA domain BM525_09280 PF13860 FlgD Ig-like domain BM525_09285 PF00676 Dehydrogenase E1 component BM525_09290 PF02779 Transketolase, pyrimidine binding domain BM525_09290 PF02780 Transketolase, C-terminal domain BM525_09295 PF00364 Biotin-requiring enzyme BM525_09295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BM525_09295 PF02817 e3 binding domain BM525_09300 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BM525_09305 PF00069 Protein kinase domain BM525_09315 PF00132 Bacterial transferase hexapeptide (six repeats) BM525_09320 PF00266 Aminotransferase class-V BM525_09330 PF13185 GAF domain BM525_09340 PF17516 ProQ C-terminal domain BM525_09340 PF04352 ProQ/FINO family BM525_09345 PF00595 PDZ domain BM525_09345 PF11818 C-terminal domain of tail specific protease (DUF3340) BM525_09345 PF03572 Peptidase family S41 BM525_09345 PF17804 Tail specific protease N-terminal domain BM525_09350 PF00209 Sodium:neurotransmitter symporter family BM525_09360 PF11940 Domain of unknown function (DUF3458) Ig-like fold BM525_09360 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BM525_09360 PF01433 Peptidase family M1 domain BM525_09375 PF07044 Protein of unknown function (DUF1329) BM525_09390 PF05088 Bacterial NAD-glutamate dehydrogenase BM525_09395 PF01180 Dihydroorotate dehydrogenase BM525_09400 PF10672 S-adenosylmethionine-dependent methyltransferase BM525_09400 PF01170 Putative RNA methylase family UPF0020 BM525_09400 PF02926 THUMP domain BM525_09420 PF04957 Ribosome modulation factor BM525_09425 PF07977 FabA-like domain BM525_09435 PF00875 DNA photolyase BM525_09435 PF03441 FAD binding domain of DNA photolyase BM525_09440 PF00875 DNA photolyase BM525_09440 PF03441 FAD binding domain of DNA photolyase BM525_09445 PF00875 DNA photolyase BM525_09445 PF03441 FAD binding domain of DNA photolyase BM525_09450 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BM525_09460 PF04183 IucA / IucC family BM525_09460 PF06276 Ferric iron reductase FhuF-like transporter BM525_09465 PF04183 IucA / IucC family BM525_09465 PF06276 Ferric iron reductase FhuF-like transporter BM525_09470 PF13193 AMP-binding enzyme C-terminal domain BM525_09470 PF00501 AMP-binding enzyme BM525_09475 PF00550 Phosphopantetheine attachment site BM525_09480 PF01261 Xylose isomerase-like TIM barrel BM525_09510 PF02899 Phage integrase, N-terminal SAM-like domain BM525_09510 PF00589 Phage integrase family BM525_09520 PF01219 Prokaryotic diacylglycerol kinase BM525_09525 PF00582 Universal stress protein family BM525_09535 PF01645 Conserved region in glutamate synthase BM525_09540 PF00999 Sodium/hydrogen exchanger family BM525_09545 PF00210 Ferritin-like domain BM525_09550 PF00210 Ferritin-like domain BM525_09560 PF00115 Cytochrome C and Quinol oxidase polypeptide I BM525_09575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BM525_09575 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BM525_09585 PF00403 Heavy-metal-associated domain BM525_09600 PF00027 Cyclic nucleotide-binding domain BM525_09600 PF13545 Crp-like helix-turn-helix domain BM525_09605 PF00582 Universal stress protein family BM525_09610 PF01171 PP-loop family BM525_09615 PF01734 Patatin-like phospholipase BM525_09635 PF01810 LysE type translocator BM525_09640 PF02146 Sir2 family BM525_09645 PF00581 Rhodanese-like domain BM525_09650 PF08534 Redoxin BM525_09665 PF01027 Inhibitor of apoptosis-promoting Bax1 BM525_09670 PF02635 DsrE/DsrF-like family BM525_09685 PF04358 DsrC like protein BM525_09700 PF07715 TonB-dependent Receptor Plug Domain BM525_09700 PF00593 TonB dependent receptor BM525_09705 PF02403 Seryl-tRNA synthetase N-terminal domain BM525_09705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BM525_09710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BM525_09715 PF16193 AAA C-terminal domain BM525_09715 PF00004 ATPase family associated with various cellular activities (AAA) BM525_09715 PF12002 MgsA AAA+ ATPase C terminal BM525_09725 PF01580 FtsK/SpoIIIE family BM525_09725 PF17854 FtsK alpha domain BM525_09725 PF09397 Ftsk gamma domain BM525_09725 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BM525_09730 PF01037 Lrp/AsnC ligand binding domain BM525_09735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BM525_09735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BM525_09740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BM525_09745 PF18073 Rubredoxin metal binding domain BM525_09760 PF00216 Bacterial DNA-binding protein BM525_09765 PF00575 S1 RNA binding domain BM525_09770 PF02224 Cytidylate kinase BM525_09775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BM525_09780 PF00266 Aminotransferase class-V BM525_09785 PF00521 DNA gyrase/topoisomerase IV, subunit A BM525_09785 PF03989 DNA gyrase C-terminal domain, beta-propeller BM525_09795 PF03477 ATP cone domain BM525_09795 PF02867 Ribonucleotide reductase, barrel domain BM525_09795 PF00317 Ribonucleotide reductase, all-alpha domain BM525_09800 PF00268 Ribonucleotide reductase, small chain BM525_09805 PF00111 2Fe-2S iron-sulfur cluster binding domain BM525_09815 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_09815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM525_09820 PF00563 EAL domain BM525_09820 PF00990 Diguanylate cyclase, GGDEF domain BM525_09820 PF03707 Bacterial signalling protein N terminal repeat BM525_09825 PF00892 EamA-like transporter family BM525_09830 PF01259 SAICAR synthetase BM525_09835 PF06804 NlpB/DapX lipoprotein BM525_09840 PF00701 Dihydrodipicolinate synthetase family BM525_09850 PF00578 AhpC/TSA family BM525_09855 PF01594 AI-2E family transporter BM525_09860 PF01435 Peptidase family M48 BM525_09870 PF03960 ArsC family BM525_09875 PF03358 NADPH-dependent FMN reductase BM525_09885 PF00308 Bacterial dnaA protein BM525_09895 PF02769 AIR synthase related protein, C-terminal domain BM525_09895 PF00586 AIR synthase related protein, N-terminal domain BM525_09900 PF00551 Formyl transferase BM525_09910 PF09317 Domain of unknown function (DUF1974) BM525_09910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_09910 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_09910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM525_09920 PF00072 Response regulator receiver domain BM525_09920 PF00196 Bacterial regulatory proteins, luxR family BM525_09925 PF13649 Methyltransferase domain BM525_09930 PF08003 Protein of unknown function (DUF1698) BM525_09935 PF00485 Phosphoribulokinase / Uridine kinase family BM525_09950 PF00128 Alpha amylase, catalytic domain BM525_09955 PF13419 Haloacid dehalogenase-like hydrolase BM525_09960 PF03453 MoeA N-terminal region (domain I and II) BM525_09960 PF00994 Probable molybdopterin binding domain BM525_09960 PF03454 MoeA C-terminal region (domain IV) BM525_09965 PF01554 MatE BM525_09980 PF01434 Peptidase family M41 BM525_09980 PF00004 ATPase family associated with various cellular activities (AAA) BM525_09980 PF17862 AAA+ lid domain BM525_09985 PF00291 Pyridoxal-phosphate dependent enzyme BM525_10045 PF00144 Beta-lactamase BM525_10045 PF11954 Domain of unknown function (DUF3471) BM525_10055 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BM525_10170 PF02567 Phenazine biosynthesis-like protein BM525_10185 PF00378 Enoyl-CoA hydratase/isomerase BM525_10200 PF00255 Glutathione peroxidase BM525_10205 PF02525 Flavodoxin-like fold BM525_10215 PF01053 Cys/Met metabolism PLP-dependent enzyme BM525_10230 PF00155 Aminotransferase class I and II BM525_10235 PF10459 Peptidase S46 BM525_10245 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BM525_10260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM525_10260 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_10260 PF12806 Acetyl-CoA dehydrogenase C-terminal like BM525_10260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_10265 PF12833 Helix-turn-helix domain BM525_10265 PF07883 Cupin domain BM525_10270 PF07715 TonB-dependent Receptor Plug Domain BM525_10270 PF00593 TonB dependent receptor BM525_10280 PF00326 Prolyl oligopeptidase family BM525_10280 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BM525_10285 PF00873 AcrB/AcrD/AcrF family BM525_10290 PF13533 Biotin-lipoyl like BM525_10300 PF00766 Electron transfer flavoprotein FAD-binding domain BM525_10300 PF01012 Electron transfer flavoprotein domain BM525_10305 PF01012 Electron transfer flavoprotein domain BM525_10315 PF00816 H-NS histone family BM525_10320 PF00561 alpha/beta hydrolase fold BM525_10330 PF00258 Flavodoxin BM525_10335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_10335 PF00672 HAMP domain BM525_10340 PF01475 Ferric uptake regulator family BM525_10345 PF01063 Amino-transferase class IV BM525_10350 PF02626 Carboxyltransferase domain, subdomain A and B BM525_10355 PF02682 Carboxyltransferase domain, subdomain C and D BM525_10360 PF03746 LamB/YcsF family BM525_10365 PF13509 S1 domain BM525_10365 PF17783 CvfB-like winged helix domain BM525_10370 PF02566 OsmC-like protein BM525_10375 PF13533 Biotin-lipoyl like BM525_10380 PF00873 AcrB/AcrD/AcrF family BM525_10385 PF00873 AcrB/AcrD/AcrF family BM525_10400 PF00155 Aminotransferase class I and II BM525_10410 PF13286 Phosphohydrolase-associated domain BM525_10410 PF01966 HD domain BM525_10415 PF00174 Oxidoreductase molybdopterin binding domain BM525_10420 PF01794 Ferric reductase like transmembrane component BM525_10435 PF02810 SEC-C motif BM525_10440 PF08448 PAS fold BM525_10440 PF08447 PAS fold BM525_10440 PF13426 PAS domain BM525_10440 PF00990 Diguanylate cyclase, GGDEF domain BM525_10440 PF00563 EAL domain BM525_10440 PF05231 MASE1 BM525_10445 PF00128 Alpha amylase, catalytic domain BM525_10455 PF08240 Alcohol dehydrogenase GroES-like domain BM525_10455 PF00107 Zinc-binding dehydrogenase BM525_10465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_10465 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_10465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM525_10475 PF07715 TonB-dependent Receptor Plug Domain BM525_10475 PF00593 TonB dependent receptor BM525_10495 PF04055 Radical SAM superfamily BM525_10495 PF06969 HemN C-terminal domain BM525_10500 PF03459 TOBE domain BM525_10500 PF00005 ABC transporter BM525_10505 PF00528 Binding-protein-dependent transport system inner membrane component BM525_10515 PF02391 MoaE protein BM525_10520 PF02597 ThiS family BM525_10525 PF01967 MoaC family BM525_10530 PF00994 Probable molybdopterin binding domain BM525_10535 PF00899 ThiF family BM525_10545 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BM525_10550 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BM525_10570 PF03435 Saccharopine dehydrogenase NADP binding domain BM525_10575 PF00155 Aminotransferase class I and II BM525_10595 PF08267 Cobalamin-independent synthase, N-terminal domain BM525_10595 PF01717 Cobalamin-independent synthase, Catalytic domain BM525_10600 PF07715 TonB-dependent Receptor Plug Domain BM525_10600 PF00593 TonB dependent receptor BM525_10610 PF00892 EamA-like transporter family BM525_10625 PF13538 UvrD-like helicase C-terminal domain BM525_10630 PF00580 UvrD/REP helicase N-terminal domain BM525_10630 PF13361 UvrD-like helicase C-terminal domain BM525_10630 PF12705 PD-(D/E)XK nuclease superfamily BM525_10635 PF17946 RecC C-terminal domain BM525_10645 PF00501 AMP-binding enzyme BM525_10650 PF08447 PAS fold BM525_10650 PF00563 EAL domain BM525_10650 PF08448 PAS fold BM525_10650 PF00990 Diguanylate cyclase, GGDEF domain BM525_10655 PF12706 Beta-lactamase superfamily domain BM525_10655 PF17770 Ribonuclease J C-terminal domain BM525_10655 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BM525_10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_10670 PF03466 LysR substrate binding domain BM525_10685 PF01022 Bacterial regulatory protein, arsR family BM525_10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_10695 PF03466 LysR substrate binding domain BM525_10705 PF02954 Bacterial regulatory protein, Fis family BM525_10705 PF00158 Sigma-54 interaction domain BM525_10705 PF00072 Response regulator receiver domain BM525_10715 PF01590 GAF domain BM525_10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_10715 PF00512 His Kinase A (phospho-acceptor) domain BM525_10715 PF08446 PAS fold BM525_10715 PF00360 Phytochrome region BM525_10720 PF00072 Response regulator receiver domain BM525_10725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_10725 PF00072 Response regulator receiver domain BM525_10725 PF09308 LuxQ, periplasmic BM525_10725 PF00512 His Kinase A (phospho-acceptor) domain BM525_10755 PF07043 Protein of unknown function (DUF1328) BM525_10775 PF07023 Protein of unknown function (DUF1315) BM525_10790 PF01235 Sodium:alanine symporter family BM525_10795 PF00246 Zinc carboxypeptidase BM525_10795 PF18027 Cytosolic carboxypeptidase N-terminal domain BM525_10800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BM525_10800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM525_10810 PF01641 SelR domain BM525_10815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BM525_10815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM525_10820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BM525_10820 PF00128 Alpha amylase, catalytic domain BM525_10825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BM525_10825 PF02806 Alpha amylase, C-terminal all-beta domain BM525_10825 PF00128 Alpha amylase, catalytic domain BM525_10830 PF02446 4-alpha-glucanotransferase BM525_10835 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BM525_10835 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM525_10840 PF01263 Aldose 1-epimerase BM525_10845 PF01081 KDPG and KHG aldolase BM525_10850 PF02685 Glucokinase BM525_10855 PF00920 Dehydratase family BM525_10860 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BM525_10865 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BM525_10865 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BM525_10870 PF01418 Helix-turn-helix domain, rpiR family BM525_10870 PF01380 SIS domain BM525_10875 PF02887 Pyruvate kinase, alpha/beta domain BM525_10875 PF00224 Pyruvate kinase, barrel domain BM525_10880 PF01048 Phosphorylase superfamily BM525_10890 PF08787 Alginate lyase BM525_10895 PF04972 BON domain BM525_10925 PF09347 Domain of unknown function (DUF1989) BM525_10950 PF04962 KduI/IolB family BM525_10955 PF03480 Bacterial extracellular solute-binding protein, family 7 BM525_10960 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BM525_10965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BM525_10970 PF00356 Bacterial regulatory proteins, lacI family BM525_10975 PF08666 SAF domain BM525_10975 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BM525_10980 PF02614 Glucuronate isomerase BM525_10985 PF01232 Mannitol dehydrogenase Rossmann domain BM525_10985 PF08125 Mannitol dehydrogenase C-terminal domain BM525_10990 PF01081 KDPG and KHG aldolase BM525_10995 PF00294 pfkB family carbohydrate kinase BM525_11010 PF07470 Glycosyl Hydrolase Family 88 BM525_11015 PF00295 Glycosyl hydrolases family 28 BM525_11020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_11020 PF00512 His Kinase A (phospho-acceptor) domain BM525_11020 PF01627 Hpt domain BM525_11020 PF00072 Response regulator receiver domain BM525_11020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM525_11020 PF00672 HAMP domain BM525_11035 PF04231 Endonuclease I BM525_11040 PF00672 HAMP domain BM525_11040 PF02743 Cache domain BM525_11040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_11055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_11055 PF03466 LysR substrate binding domain BM525_11060 PF00465 Iron-containing alcohol dehydrogenase BM525_11065 PF08448 PAS fold BM525_11065 PF08447 PAS fold BM525_11065 PF00990 Diguanylate cyclase, GGDEF domain BM525_11065 PF00563 EAL domain BM525_11075 PF11849 Domain of unknown function (DUF3369) BM525_11080 PF00512 His Kinase A (phospho-acceptor) domain BM525_11080 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM525_11080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_11095 PF00939 Sodium:sulfate symporter transmembrane region BM525_11100 PF00692 dUTPase BM525_11105 PF10609 NUBPL iron-transfer P-loop NTPase BM525_11110 PF08264 Anticodon-binding domain of tRNA BM525_11110 PF09334 tRNA synthetases class I (M) BM525_11110 PF01588 Putative tRNA binding domain BM525_11115 PF00924 Mechanosensitive ion channel BM525_11115 PF05552 Conserved TM helix BM525_11120 PF08241 Methyltransferase domain BM525_11125 PF16123 Hydroxyacylglutathione hydrolase C-terminus BM525_11125 PF00753 Metallo-beta-lactamase superfamily BM525_11130 PF01464 Transglycosylase SLT domain BM525_11130 PF01476 LysM domain BM525_11150 PF09190 DALR domain BM525_11150 PF01406 tRNA synthetases class I (C) catalytic domain BM525_11155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BM525_11160 PF00149 Calcineurin-like phosphoesterase BM525_11170 PF15975 Flotillin BM525_11170 PF01145 SPFH domain / Band 7 family BM525_11180 PF00128 Alpha amylase, catalytic domain BM525_11185 PF01638 HxlR-like helix-turn-helix BM525_11190 PF00107 Zinc-binding dehydrogenase BM525_11190 PF08240 Alcohol dehydrogenase GroES-like domain BM525_11205 PF18011 C-terminal domain found in long catalases BM525_11205 PF06628 Catalase-related immune-responsive BM525_11205 PF00199 Catalase BM525_11210 PF08240 Alcohol dehydrogenase GroES-like domain BM525_11210 PF00107 Zinc-binding dehydrogenase BM525_11215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_11215 PF03466 LysR substrate binding domain BM525_11240 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BM525_11250 PF00156 Phosphoribosyl transferase domain BM525_11255 PF02674 Colicin V production protein BM525_11260 PF05036 Sporulation related domain BM525_11265 PF02875 Mur ligase family, glutamate ligase domain BM525_11265 PF08245 Mur ligase middle domain BM525_11270 PF17848 Acetyl-coA carboxylase zinc finger domain BM525_11270 PF01039 Carboxyl transferase domain BM525_11275 PF01416 tRNA pseudouridine synthase BM525_11285 PF01118 Semialdehyde dehydrogenase, NAD binding domain BM525_11285 PF02774 Semialdehyde dehydrogenase, dimerisation domain BM525_11290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM525_11290 PF11890 Domain of unknown function (DUF3410) BM525_11290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM525_11295 PF00596 Class II Aldolase and Adducin N-terminal domain BM525_11310 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BM525_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_11315 PF03466 LysR substrate binding domain BM525_11320 PF00892 EamA-like transporter family BM525_11335 PF00111 2Fe-2S iron-sulfur cluster binding domain BM525_11335 PF01799 [2Fe-2S] binding domain BM525_11350 PF00144 Beta-lactamase BM525_11355 PF00109 Beta-ketoacyl synthase, N-terminal domain BM525_11355 PF02801 Beta-ketoacyl synthase, C-terminal domain BM525_11360 PF13193 AMP-binding enzyme C-terminal domain BM525_11360 PF00501 AMP-binding enzyme BM525_11370 PF01266 FAD dependent oxidoreductase BM525_11370 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BM525_11405 PF13411 MerR HTH family regulatory protein BM525_11410 PF00107 Zinc-binding dehydrogenase BM525_11410 PF08240 Alcohol dehydrogenase GroES-like domain BM525_11435 PF00005 ABC transporter BM525_11440 PF02667 Short chain fatty acid transporter BM525_11445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM525_11445 PF00072 Response regulator receiver domain BM525_11445 PF00672 HAMP domain BM525_11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_11445 PF00512 His Kinase A (phospho-acceptor) domain BM525_11445 PF01627 Hpt domain BM525_11450 PF02627 Carboxymuconolactone decarboxylase family BM525_11455 PF00675 Insulinase (Peptidase family M16) BM525_11455 PF05193 Peptidase M16 inactive domain BM525_11470 PF04315 Elongation factor P hydroxylase BM525_11495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM525_11495 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_11500 PF00378 Enoyl-CoA hydratase/isomerase BM525_11505 PF00440 Bacterial regulatory proteins, tetR family BM525_11505 PF02909 Tetracyclin repressor-like, C-terminal domain BM525_11510 PF05199 GMC oxidoreductase BM525_11510 PF00732 GMC oxidoreductase BM525_11520 PF06974 Protein of unknown function (DUF1298) BM525_11520 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BM525_11530 PF04286 Protein of unknown function (DUF445) BM525_11555 PF00326 Prolyl oligopeptidase family BM525_11555 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BM525_11560 PF07840 FadR C-terminal domain BM525_11560 PF00392 Bacterial regulatory proteins, gntR family BM525_11565 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BM525_11570 PF02600 Disulfide bond formation protein DsbB BM525_11575 PF13302 Acetyltransferase (GNAT) domain BM525_11585 PF03692 Putative zinc- or iron-chelating domain BM525_11590 PF01557 Fumarylacetoacetate (FAA) hydrolase family BM525_11600 PF05166 YcgL domain BM525_11605 PF01612 3'-5' exonuclease BM525_11605 PF00570 HRDC domain BM525_11610 PF00501 AMP-binding enzyme BM525_11610 PF13193 AMP-binding enzyme C-terminal domain BM525_11615 PF12697 Alpha/beta hydrolase family BM525_11630 PF00814 Glycoprotease family BM525_11635 PF06733 DEAD_2 BM525_11635 PF13307 Helicase C-terminal domain BM525_11660 PF00128 Alpha amylase, catalytic domain BM525_11690 PF00593 TonB dependent receptor BM525_11690 PF07715 TonB-dependent Receptor Plug Domain BM525_11700 PF08029 HisG, C-terminal domain BM525_11700 PF01634 ATP phosphoribosyltransferase BM525_11705 PF00815 Histidinol dehydrogenase BM525_11710 PF00155 Aminotransferase class I and II BM525_11715 PF00475 Imidazoleglycerol-phosphate dehydratase BM525_11720 PF00117 Glutamine amidotransferase class-I BM525_11725 PF00977 Histidine biosynthesis protein BM525_11730 PF00977 Histidine biosynthesis protein BM525_11735 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BM525_11735 PF01502 Phosphoribosyl-AMP cyclohydrolase BM525_11740 PF01226 Formate/nitrite transporter BM525_11745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_11745 PF00672 HAMP domain BM525_11755 PF07715 TonB-dependent Receptor Plug Domain BM525_11755 PF00593 TonB dependent receptor BM525_11775 PF05191 Adenylate kinase, active site lid BM525_11780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_11780 PF00183 Hsp90 protein BM525_11785 PF13662 Toprim domain BM525_11785 PF02132 RecR protein BM525_11795 PF00360 Phytochrome region BM525_11795 PF01590 GAF domain BM525_11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_11795 PF00512 His Kinase A (phospho-acceptor) domain BM525_11795 PF08446 PAS fold BM525_11810 PF01420 Type I restriction modification DNA specificity domain BM525_11815 PF02384 N-6 DNA Methylase BM525_11815 PF12161 HsdM N-terminal domain BM525_11820 PF04851 Type III restriction enzyme, res subunit BM525_11820 PF08463 EcoEI R protein C-terminal BM525_11820 PF00271 Helicase conserved C-terminal domain BM525_11820 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BM525_11865 PF12167 Arm DNA-binding domain BM525_11865 PF00589 Phage integrase family BM525_11880 PF02575 YbaB/EbfC DNA-binding family BM525_11885 PF12169 DNA polymerase III subunits gamma and tau domain III BM525_11885 PF12170 DNA polymerase III tau subunit V interacting with alpha BM525_11885 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BM525_11890 PF00156 Phosphoribosyl transferase domain BM525_11900 PF05114 Protein of unknown function (DUF692) BM525_11910 PF02687 FtsX-like permease family BM525_11910 PF12704 MacB-like periplasmic core domain BM525_11910 PF00005 ABC transporter BM525_11920 PF01590 GAF domain BM525_11920 PF00360 Phytochrome region BM525_11920 PF00563 EAL domain BM525_11920 PF00990 Diguanylate cyclase, GGDEF domain BM525_11950 PF01066 CDP-alcohol phosphatidyltransferase BM525_11970 PF09330 D-lactate dehydrogenase, membrane binding BM525_11970 PF01565 FAD binding domain BM525_11975 PF00004 ATPase family associated with various cellular activities (AAA) BM525_11975 PF17871 AAA lid domain BM525_11975 PF10431 C-terminal, D2-small domain, of ClpB protein BM525_11975 PF07724 AAA domain (Cdc48 subfamily) BM525_11975 PF02861 Clp amino terminal domain, pathogenicity island component BM525_11985 PF00849 RNA pseudouridylate synthase BM525_11985 PF01479 S4 domain BM525_11990 PF13525 Outer membrane lipoprotein BM525_12000 PF04542 Sigma-70 region 2 BM525_12000 PF04545 Sigma-70, region 4 BM525_12015 PF00106 short chain dehydrogenase BM525_12035 PF00691 OmpA family BM525_12035 PF13677 Membrane MotB of proton-channel complex MotA/MotB BM525_12040 PF01618 MotA/TolQ/ExbB proton channel family BM525_12045 PF02609 Exonuclease VII small subunit BM525_12050 PF00348 Polyprenyl synthetase BM525_12055 PF02779 Transketolase, pyrimidine binding domain BM525_12055 PF02780 Transketolase, C-terminal domain BM525_12055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BM525_12060 PF04608 Phosphatidylglycerophosphatase A BM525_12065 PF02769 AIR synthase related protein, C-terminal domain BM525_12065 PF00586 AIR synthase related protein, N-terminal domain BM525_12070 PF01029 NusB family BM525_12075 PF00885 6,7-dimethyl-8-ribityllumazine synthase BM525_12080 PF00925 GTP cyclohydrolase II BM525_12080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BM525_12085 PF00677 Lumazine binding domain BM525_12090 PF01872 RibD C-terminal domain BM525_12090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BM525_12095 PF03477 ATP cone domain BM525_12100 PF00464 Serine hydroxymethyltransferase BM525_12110 PF12848 ABC transporter BM525_12110 PF00005 ABC transporter BM525_12120 PF18073 Rubredoxin metal binding domain BM525_12130 PF18429 Domain of unknown function (DUF5609) BM525_12140 PF01026 TatD related DNase BM525_12145 PF01243 Pyridoxamine 5'-phosphate oxidase BM525_12145 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BM525_12150 PF07650 KH domain BM525_12150 PF01926 50S ribosome-binding GTPase BM525_12155 PF14622 Ribonuclease-III-like BM525_12155 PF00035 Double-stranded RNA binding motif BM525_12160 PF10502 Signal peptidase, peptidase S26 BM525_12165 PF00009 Elongation factor Tu GTP binding domain BM525_12165 PF06421 GTP-binding protein LepA C-terminus BM525_12165 PF00679 Elongation factor G C-terminus BM525_12165 PF03144 Elongation factor Tu domain 2 BM525_12175 PF03888 MucB/RseB N-terminal domain BM525_12175 PF17188 MucB/RseB C-terminal domain BM525_12185 PF08281 Sigma-70, region 4 BM525_12185 PF04542 Sigma-70 region 2 BM525_12190 PF02910 Fumarate reductase flavoprotein C-term BM525_12190 PF00890 FAD binding domain BM525_12205 PF03937 Flavinator of succinate dehydrogenase BM525_12215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM525_12220 PF00543 Nitrogen regulatory protein P-II BM525_12225 PF02540 NAD synthase BM525_12260 PF07963 Prokaryotic N-terminal methylation motif BM525_12260 PF00114 Pilin (bacterial filament) BM525_12285 PF02401 LytB protein BM525_12290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM525_12295 PF01252 Signal peptidase (SPase) II BM525_12300 PF00133 tRNA synthetases class I (I, L, M and V) BM525_12300 PF08264 Anticodon-binding domain of tRNA BM525_12300 PF06827 Zinc finger found in FPG and IleRS BM525_12305 PF01687 Riboflavin kinase BM525_12305 PF06574 FAD synthetase BM525_12310 PF03023 Lipid II flippase MurJ BM525_12315 PF01649 Ribosomal protein S20 BM525_12320 PF00106 short chain dehydrogenase BM525_12335 PF01758 Sodium Bile acid symporter family BM525_12340 PF03466 LysR substrate binding domain BM525_12340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_12360 PF07687 Peptidase dimerisation domain BM525_12360 PF01546 Peptidase family M20/M25/M40 BM525_12365 PF13145 PPIC-type PPIASE domain BM525_12370 PF00216 Bacterial DNA-binding protein BM525_12375 PF00004 ATPase family associated with various cellular activities (AAA) BM525_12375 PF02190 ATP-dependent protease La (LON) substrate-binding domain BM525_12375 PF05362 Lon protease (S16) C-terminal proteolytic domain BM525_12380 PF06689 ClpX C4-type zinc finger BM525_12380 PF10431 C-terminal, D2-small domain, of ClpB protein BM525_12380 PF07724 AAA domain (Cdc48 subfamily) BM525_12385 PF00574 Clp protease BM525_12390 PF05697 Bacterial trigger factor protein (TF) BM525_12390 PF05698 Bacterial trigger factor protein (TF) C-terminus BM525_12390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM525_12435 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BM525_12435 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BM525_12445 PF01980 tRNA-methyltransferase O BM525_12445 PF18389 TrmO C-terminal domain BM525_12450 PF03129 Anticodon binding domain BM525_12450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BM525_12455 PF00753 Metallo-beta-lactamase superfamily BM525_12455 PF12706 Beta-lactamase superfamily domain BM525_12460 PF02253 Phospholipase A1 BM525_12465 PF00850 Histone deacetylase domain BM525_12470 PF00672 HAMP domain BM525_12470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_12470 PF02743 Cache domain BM525_12475 PF02540 NAD synthase BM525_12475 PF00117 Glutamine amidotransferase class-I BM525_12475 PF00958 GMP synthase C terminal domain BM525_12480 PF00571 CBS domain BM525_12480 PF00478 IMP dehydrogenase / GMP reductase domain BM525_12485 PF13742 OB-fold nucleic acid binding domain BM525_12485 PF02601 Exonuclease VII, large subunit BM525_12500 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BM525_12500 PF01926 50S ribosome-binding GTPase BM525_12505 PF13360 PQQ-like domain BM525_12510 PF09976 Tetratricopeptide repeat-like domain BM525_12515 PF03129 Anticodon binding domain BM525_12515 PF13393 Histidyl-tRNA synthetase BM525_12520 PF04551 GcpE protein BM525_12525 PF13464 Domain of unknown function (DUF4115) BM525_12535 PF04055 Radical SAM superfamily BM525_12540 PF00334 Nucleoside diphosphate kinase BM525_12545 PF02657 Fe-S metabolism associated domain BM525_12550 PF01883 Iron-sulfur cluster assembly protein BM525_12555 PF01521 Iron-sulphur cluster biosynthesis BM525_12560 PF00266 Aminotransferase class-V BM525_12565 PF01458 Uncharacterized protein family (UPF0051) BM525_12570 PF00005 ABC transporter BM525_12575 PF01458 Uncharacterized protein family (UPF0051) BM525_12580 PF00266 Aminotransferase class-V BM525_12585 PF02082 Transcriptional regulator BM525_12590 PF00743 Flavin-binding monooxygenase-like BM525_12595 PF00132 Bacterial transferase hexapeptide (six repeats) BM525_12595 PF06426 Serine acetyltransferase, N-terminal BM525_12600 PF00588 SpoU rRNA Methylase family BM525_12605 PF00459 Inositol monophosphatase family BM525_12620 PF02355 Protein export membrane protein BM525_12620 PF07549 SecD/SecF GG Motif BM525_12625 PF02355 Protein export membrane protein BM525_12625 PF13721 SecD export protein N-terminal TM region BM525_12625 PF07549 SecD/SecF GG Motif BM525_12630 PF02699 Preprotein translocase subunit BM525_12635 PF01702 Queuine tRNA-ribosyltransferase BM525_12640 PF02547 Queuosine biosynthesis protein BM525_12655 PF04012 PspA/IM30 family BM525_12660 PF07885 Ion channel BM525_12675 PF06693 Protein of unknown function (DUF1190) BM525_12680 PF03738 Glutathionylspermidine synthase preATP-grasp BM525_12695 PF00005 ABC transporter BM525_12710 PF04960 Glutaminase BM525_12715 PF00245 Alkaline phosphatase BM525_12720 PF00072 Response regulator receiver domain BM525_12725 PF00463 Isocitrate lyase family BM525_12730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_12730 PF03466 LysR substrate binding domain BM525_12735 PF01274 Malate synthase BM525_12745 PF01370 NAD dependent epimerase/dehydratase family BM525_12750 PF17820 PDZ domain BM525_12750 PF13180 PDZ domain BM525_12785 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BM525_12785 PF14602 Hexapeptide repeat of succinyl-transferase BM525_12785 PF00132 Bacterial transferase hexapeptide (six repeats) BM525_12805 PF00534 Glycosyl transferases group 1 BM525_12805 PF13439 Glycosyltransferase Family 4 BM525_12820 PF13537 Glutamine amidotransferase domain BM525_12820 PF00733 Asparagine synthase BM525_12825 PF01757 Acyltransferase family BM525_12830 PF00534 Glycosyl transferases group 1 BM525_12830 PF13439 Glycosyltransferase Family 4 BM525_12840 PF00535 Glycosyl transferase family 2 BM525_12855 PF01943 Polysaccharide biosynthesis protein BM525_12875 PF01757 Acyltransferase family BM525_12895 PF01522 Polysaccharide deacetylase BM525_12900 PF02397 Bacterial sugar transferase BM525_12915 PF13614 AAA domain BM525_12925 PF13401 AAA domain BM525_12925 PF01471 Putative peptidoglycan binding domain BM525_12930 PF01467 Cytidylyltransferase-like BM525_12930 PF00294 pfkB family carbohydrate kinase BM525_12935 PF01541 GIY-YIG catalytic domain BM525_12950 PF08335 GlnD PII-uridylyltransferase BM525_12950 PF03710 Glutamate-ammonia ligase adenylyltransferase BM525_12960 PF03279 Bacterial lipid A biosynthesis acyltransferase BM525_12975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_12975 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_12975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM525_12975 PF09317 Domain of unknown function (DUF1974) BM525_12990 PF00990 Diguanylate cyclase, GGDEF domain BM525_12990 PF00563 EAL domain BM525_12990 PF03707 Bacterial signalling protein N terminal repeat BM525_12990 PF13188 PAS domain BM525_12995 PF00265 Thymidine kinase BM525_13005 PF00356 Bacterial regulatory proteins, lacI family BM525_13040 PF01926 50S ribosome-binding GTPase BM525_13045 PF00588 SpoU rRNA Methylase family BM525_13045 PF08032 RNA 2'-O ribose methyltransferase substrate binding BM525_13050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM525_13050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM525_13050 PF00378 Enoyl-CoA hydratase/isomerase BM525_13065 PF00171 Aldehyde dehydrogenase family BM525_13070 PF05199 GMC oxidoreductase BM525_13070 PF00732 GMC oxidoreductase BM525_13085 PF05971 RNA methyltransferase BM525_13090 PF00376 MerR family regulatory protein BM525_13090 PF09278 MerR, DNA binding BM525_13120 PF18158 Adaptive response protein AidB N-terminal domain BM525_13120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM525_13120 PF02770 Acyl-CoA dehydrogenase, middle domain BM525_13140 PF00072 Response regulator receiver domain BM525_13140 PF00486 Transcriptional regulatory protein, C terminal BM525_13145 PF16527 Two-component sensor protein CpxA, periplasmic domain BM525_13145 PF00672 HAMP domain BM525_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_13145 PF00512 His Kinase A (phospho-acceptor) domain BM525_13155 PF03965 Penicillinase repressor BM525_13160 PF03544 Gram-negative bacterial TonB protein C-terminal BM525_13175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM525_13190 PF00111 2Fe-2S iron-sulfur cluster binding domain BM525_13190 PF01799 [2Fe-2S] binding domain BM525_13195 PF00941 FAD binding domain in molybdopterin dehydrogenase BM525_13195 PF03450 CO dehydrogenase flavoprotein C-terminal domain BM525_13200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM525_13200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM525_13225 PF00106 short chain dehydrogenase BM525_13230 PF01965 DJ-1/PfpI family BM525_13235 PF03631 Virulence factor BrkB BM525_13250 PF07152 YaeQ protein BM525_13280 PF07690 Major Facilitator Superfamily BM525_13300 PF09382 RQC domain BM525_13300 PF00570 HRDC domain BM525_13300 PF00271 Helicase conserved C-terminal domain BM525_13300 PF16124 RecQ zinc-binding BM525_13300 PF00270 DEAD/DEAH box helicase BM525_13320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM525_13320 PF00072 Response regulator receiver domain BM525_13320 PF01627 Hpt domain BM525_13320 PF00512 His Kinase A (phospho-acceptor) domain BM525_13320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_13320 PF00672 HAMP domain BM525_13325 PF00990 Diguanylate cyclase, GGDEF domain BM525_13340 PF01590 GAF domain BM525_13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_13340 PF00512 His Kinase A (phospho-acceptor) domain BM525_13340 PF08446 PAS fold BM525_13340 PF00360 Phytochrome region BM525_13345 PF07995 Glucose / Sorbosone dehydrogenase BM525_13370 PF12728 Helix-turn-helix domain BM525_13370 PF02661 Fic/DOC family BM525_13395 PF01597 Glycine cleavage H-protein BM525_13400 PF08669 Glycine cleavage T-protein C-terminal barrel domain BM525_13400 PF01571 Aminomethyltransferase folate-binding domain BM525_13405 PF01979 Amidohydrolase family BM525_13410 PF01869 BadF/BadG/BcrA/BcrD ATPase family BM525_13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_13415 PF03466 LysR substrate binding domain BM525_13420 PF02652 L-lactate permease BM525_13430 PF00557 Metallopeptidase family M24 BM525_13430 PF01321 Creatinase/Prolidase N-terminal domain BM525_13445 PF01494 FAD binding domain BM525_13450 PF01494 FAD binding domain BM525_13455 PF05195 Aminopeptidase P, N-terminal domain BM525_13455 PF00557 Metallopeptidase family M24 BM525_13460 PF03695 Uncharacterised protein family (UPF0149) BM525_13470 PF00294 pfkB family carbohydrate kinase BM525_13475 PF01156 Inosine-uridine preferring nucleoside hydrolase BM525_13480 PF01627 Hpt domain BM525_13480 PF00989 PAS fold BM525_13480 PF00072 Response regulator receiver domain BM525_13480 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM525_13480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_13480 PF00512 His Kinase A (phospho-acceptor) domain BM525_13485 PF01812 5-formyltetrahydrofolate cyclo-ligase family BM525_13490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BM525_13495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM525_13495 PF01842 ACT domain BM525_13495 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM525_13515 PF06945 Protein of unknown function (DUF1289) BM525_13525 PF00873 AcrB/AcrD/AcrF family BM525_13530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM525_13535 PF03466 LysR substrate binding domain BM525_13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_13550 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_13550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM525_13555 PF00364 Biotin-requiring enzyme BM525_13555 PF02817 e3 binding domain BM525_13555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BM525_13560 PF00456 Transketolase, thiamine diphosphate binding domain BM525_13560 PF17831 Pyruvate dehydrogenase E1 component middle domain BM525_13565 PF07729 FCD domain BM525_13565 PF00392 Bacterial regulatory proteins, gntR family BM525_13575 PF01510 N-acetylmuramoyl-L-alanine amidase BM525_13585 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BM525_13585 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BM525_13590 PF07963 Prokaryotic N-terminal methylation motif BM525_13595 PF00482 Type II secretion system (T2SS), protein F BM525_13600 PF01478 Type IV leader peptidase family BM525_13600 PF06750 Bacterial Peptidase A24 N-terminal domain BM525_13605 PF01121 Dephospho-CoA kinase BM525_13610 PF07072 Cell division protein BM525_13620 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BM525_13625 PF00293 NUDIX domain BM525_13630 PF01043 SecA preprotein cross-linking domain BM525_13630 PF02810 SEC-C motif BM525_13630 PF07517 SecA DEAD-like domain BM525_13630 PF07516 SecA Wing and Scaffold domain BM525_13635 PF01476 LysM domain BM525_13635 PF01551 Peptidase family M23 BM525_13635 PF08525 Opacity-associated protein A N-terminal motif BM525_13640 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BM525_13645 PF12327 FtsZ family, C-terminal domain BM525_13645 PF00091 Tubulin/FtsZ family, GTPase domain BM525_13650 PF02491 SHS2 domain inserted in FTSA BM525_13655 PF08478 POTRA domain, FtsQ-type BM525_13655 PF03799 Cell division protein FtsQ BM525_13660 PF01820 D-ala D-ala ligase N-terminus BM525_13660 PF07478 D-ala D-ala ligase C-terminus BM525_13665 PF02875 Mur ligase family, glutamate ligase domain BM525_13665 PF08245 Mur ligase middle domain BM525_13665 PF01225 Mur ligase family, catalytic domain BM525_13670 PF04101 Glycosyltransferase family 28 C-terminal domain BM525_13670 PF03033 Glycosyltransferase family 28 N-terminal domain BM525_13675 PF01098 Cell cycle protein BM525_13680 PF02875 Mur ligase family, glutamate ligase domain BM525_13680 PF08245 Mur ligase middle domain BM525_13685 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BM525_13685 PF00953 Glycosyl transferase family 4 BM525_13690 PF01225 Mur ligase family, catalytic domain BM525_13690 PF02875 Mur ligase family, glutamate ligase domain BM525_13690 PF08245 Mur ligase middle domain BM525_13695 PF08245 Mur ligase middle domain BM525_13695 PF02875 Mur ligase family, glutamate ligase domain BM525_13695 PF01225 Mur ligase family, catalytic domain BM525_13700 PF03717 Penicillin-binding Protein dimerisation domain BM525_13700 PF00905 Penicillin binding protein transpeptidase domain BM525_13705 PF04999 Cell division protein FtsL BM525_13710 PF01795 MraW methylase family BM525_13715 PF02381 MraZ protein, putative antitoxin-like BM525_13735 PF00873 AcrB/AcrD/AcrF family BM525_13740 PF00529 HlyD membrane-fusion protein of T1SS BM525_13740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM525_13760 PF00462 Glutaredoxin BM525_13760 PF08534 Redoxin BM525_13765 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BM525_13775 PF17158 Membrane-associated sensor, integral membrane domain BM525_13775 PF00990 Diguanylate cyclase, GGDEF domain BM525_13785 PF02954 Bacterial regulatory protein, Fis family BM525_13785 PF00158 Sigma-54 interaction domain BM525_13785 PF00072 Response regulator receiver domain BM525_13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_13790 PF00512 His Kinase A (phospho-acceptor) domain BM525_13790 PF09456 RcsC Alpha-Beta-Loop (ABL) BM525_13790 PF00072 Response regulator receiver domain BM525_13795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BM525_13795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BM525_13800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BM525_13800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM525_13805 PF07690 Major Facilitator Superfamily BM525_13830 PF05552 Conserved TM helix BM525_13830 PF00924 Mechanosensitive ion channel BM525_13835 PF04452 RNA methyltransferase BM525_13840 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BM525_13840 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BM525_13845 PF02622 Uncharacterized ACR, COG1678 BM525_13850 PF03652 Holliday junction resolvase BM525_13860 PF00437 Type II/IV secretion system protein BM525_13865 PF00437 Type II/IV secretion system protein BM525_13870 PF01168 Alanine racemase, N-terminal domain BM525_13875 PF03807 NADP oxidoreductase coenzyme F420-dependent BM525_13875 PF14748 Pyrroline-5-carboxylate reductase dimerisation BM525_13880 PF02325 YGGT family BM525_13890 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_13890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM525_13905 PF14834 Glutathione S-transferase, C-terminal domain BM525_13905 PF02798 Glutathione S-transferase, N-terminal domain BM525_13910 PF00080 Copper/zinc superoxide dismutase (SODC) BM525_13915 PF02566 OsmC-like protein BM525_13920 PF01625 Peptide methionine sulfoxide reductase BM525_13935 PF03591 AzlC protein BM525_13945 PF07690 Major Facilitator Superfamily BM525_13950 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BM525_13955 PF03883 Peroxide stress protein YaaA BM525_13965 PF00923 Transaldolase/Fructose-6-phosphate aldolase BM525_13970 PF00342 Phosphoglucose isomerase BM525_13975 PF03167 Uracil DNA glycosylase superfamily BM525_13980 PF14821 Threonine synthase N terminus BM525_13980 PF00291 Pyridoxal-phosphate dependent enzyme BM525_13985 PF08544 GHMP kinases C terminal BM525_13985 PF00288 GHMP kinases N terminal domain BM525_13990 PF00696 Amino acid kinase family BM525_13990 PF03447 Homoserine dehydrogenase, NAD binding domain BM525_13990 PF13840 ACT domain BM525_13990 PF01842 ACT domain BM525_13990 PF00742 Homoserine dehydrogenase BM525_13995 PF17755 UvrA DNA-binding domain BM525_14000 PF03466 LysR substrate binding domain BM525_14000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_14005 PF00107 Zinc-binding dehydrogenase BM525_14005 PF08240 Alcohol dehydrogenase GroES-like domain BM525_14015 PF01022 Bacterial regulatory protein, arsR family BM525_14025 PF03358 NADPH-dependent FMN reductase BM525_14030 PF01758 Sodium Bile acid symporter family BM525_14035 PF01339 CheB methylesterase BM525_14035 PF00072 Response regulator receiver domain BM525_14040 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BM525_14045 PF00072 Response regulator receiver domain BM525_14045 PF00486 Transcriptional regulatory protein, C terminal BM525_14050 PF00672 HAMP domain BM525_14050 PF00512 His Kinase A (phospho-acceptor) domain BM525_14050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_14065 PF00291 Pyridoxal-phosphate dependent enzyme BM525_14075 PF04116 Fatty acid hydroxylase superfamily BM525_14095 PF16653 Saccharopine dehydrogenase C-terminal domain BM525_14095 PF03435 Saccharopine dehydrogenase NADP binding domain BM525_14100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BM525_14110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BM525_14115 PF04348 LppC putative lipoprotein BM525_14120 PF02021 Uncharacterised protein family UPF0102 BM525_14125 PF00534 Glycosyl transferases group 1 BM525_14130 PF13580 SIS domain BM525_14135 PF04972 BON domain BM525_14140 PF07690 Major Facilitator Superfamily BM525_14150 PF00893 Small Multidrug Resistance protein BM525_14155 PF07730 Histidine kinase BM525_14160 PF00196 Bacterial regulatory proteins, luxR family BM525_14160 PF00072 Response regulator receiver domain BM525_14175 PF07715 TonB-dependent Receptor Plug Domain BM525_14175 PF00593 TonB dependent receptor BM525_14190 PF00285 Citrate synthase, C-terminal domain BM525_14195 PF00694 Aconitase C-terminal domain BM525_14195 PF00330 Aconitase family (aconitate hydratase) BM525_14200 PF04303 PrpF protein BM525_14205 PF00990 Diguanylate cyclase, GGDEF domain BM525_14210 PF00474 Sodium:solute symporter family BM525_14225 PF00512 His Kinase A (phospho-acceptor) domain BM525_14225 PF18415 Histidine kinase receptor ArcB trans-membrane domain BM525_14225 PF01627 Hpt domain BM525_14225 PF00989 PAS fold BM525_14225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_14225 PF00072 Response regulator receiver domain BM525_14230 PF01510 N-acetylmuramoyl-L-alanine amidase BM525_14235 PF01645 Conserved region in glutamate synthase BM525_14235 PF01493 GXGXG motif BM525_14235 PF00310 Glutamine amidotransferases class-II BM525_14235 PF04898 Glutamate synthase central domain BM525_14240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BM525_14240 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_14260 PF01048 Phosphorylase superfamily BM525_14265 PF03186 CobD/Cbib protein BM525_14270 PF01497 Periplasmic binding protein BM525_14275 PF00581 Rhodanese-like domain BM525_14290 PF01266 FAD dependent oxidoreductase BM525_14295 PF07237 Protein of unknown function (DUF1428) BM525_14300 PF00579 tRNA synthetases class I (W and Y) BM525_14305 PF01551 Peptidase family M23 BM525_14305 PF01476 LysM domain BM525_14310 PF03702 Anhydro-N-acetylmuramic acid kinase BM525_14315 PF07690 Major Facilitator Superfamily BM525_14325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM525_14335 PF01053 Cys/Met metabolism PLP-dependent enzyme BM525_14340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM525_14340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM525_14345 PF13417 Glutathione S-transferase, N-terminal domain BM525_14345 PF00043 Glutathione S-transferase, C-terminal domain BM525_14350 PF01521 Iron-sulphur cluster biosynthesis BM525_14360 PF03976 Polyphosphate kinase 2 (PPK2) BM525_14365 PF03776 Septum formation topological specificity factor MinE BM525_14370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BM525_14375 PF05209 Septum formation inhibitor MinC, N-terminal domain BM525_14375 PF03775 Septum formation inhibitor MinC, C-terminal domain BM525_14380 PF10415 Fumarase C C-terminus BM525_14380 PF00206 Lyase BM525_14385 PF00127 Copper binding proteins, plastocyanin/azurin family BM525_14420 PF01566 Natural resistance-associated macrophage protein BM525_14425 PF00155 Aminotransferase class I and II BM525_14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_14430 PF13188 PAS domain BM525_14430 PF08448 PAS fold BM525_14430 PF00512 His Kinase A (phospho-acceptor) domain BM525_14430 PF00072 Response regulator receiver domain BM525_14440 PF03951 Glutamine synthetase, beta-Grasp domain BM525_14440 PF00120 Glutamine synthetase, catalytic domain BM525_14450 PF00989 PAS fold BM525_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_14450 PF00512 His Kinase A (phospho-acceptor) domain BM525_14455 PF02954 Bacterial regulatory protein, Fis family BM525_14455 PF00072 Response regulator receiver domain BM525_14455 PF00158 Sigma-54 interaction domain BM525_14460 PF00072 Response regulator receiver domain BM525_14465 PF01553 Acyltransferase BM525_14470 PF06877 Regulator of ribonuclease activity B BM525_14480 PF17158 Membrane-associated sensor, integral membrane domain BM525_14480 PF00990 Diguanylate cyclase, GGDEF domain BM525_14500 PF00512 His Kinase A (phospho-acceptor) domain BM525_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_14500 PF00672 HAMP domain BM525_14500 PF00072 Response regulator receiver domain BM525_14500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM525_14500 PF01627 Hpt domain BM525_14505 PF08264 Anticodon-binding domain of tRNA BM525_14505 PF00133 tRNA synthetases class I (I, L, M and V) BM525_14505 PF10458 Valyl tRNA synthetase tRNA binding arm BM525_14510 PF04364 DNA polymerase III chi subunit, HolC BM525_14515 PF02789 Cytosol aminopeptidase family, N-terminal domain BM525_14515 PF00883 Cytosol aminopeptidase family, catalytic domain BM525_14520 PF03739 Lipopolysaccharide export system permease LptF/LptG BM525_14525 PF03739 Lipopolysaccharide export system permease LptF/LptG BM525_14540 PF04545 Sigma-70, region 4 BM525_14540 PF04542 Sigma-70 region 2 BM525_14590 PF00690 Cation transporter/ATPase, N-terminus BM525_14590 PF00689 Cation transporting ATPase, C-terminus BM525_14600 PF06165 Glycosyltransferase family 36 BM525_14600 PF10091 Putative glucoamylase BM525_14600 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BM525_14610 PF13185 GAF domain BM525_14610 PF00990 Diguanylate cyclase, GGDEF domain BM525_14640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM525_14640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM525_14645 PF00512 His Kinase A (phospho-acceptor) domain BM525_14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_14645 PF00672 HAMP domain BM525_14645 PF14827 Double sensory domain of two-component sensor kinase BM525_14645 PF13426 PAS domain BM525_14650 PF01594 AI-2E family transporter BM525_14665 PF00005 ABC transporter BM525_14670 PF01032 FecCD transport family BM525_14675 PF01497 Periplasmic binding protein BM525_14685 PF00593 TonB dependent receptor BM525_14685 PF07715 TonB-dependent Receptor Plug Domain BM525_14695 PF00230 Major intrinsic protein BM525_14700 PF00892 EamA-like transporter family BM525_14715 PF07715 TonB-dependent Receptor Plug Domain BM525_14715 PF00593 TonB dependent receptor BM525_14730 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BM525_14730 PF00753 Metallo-beta-lactamase superfamily BM525_14730 PF10996 Beta-Casp domain BM525_14735 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BM525_14740 PF01321 Creatinase/Prolidase N-terminal domain BM525_14740 PF00557 Metallopeptidase family M24 BM525_14745 PF05221 S-adenosyl-L-homocysteine hydrolase BM525_14745 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BM525_14750 PF00990 Diguanylate cyclase, GGDEF domain BM525_14750 PF00072 Response regulator receiver domain BM525_14755 PF03547 Membrane transport protein BM525_14760 PF05426 Alginate lyase BM525_14760 PF07940 Heparinase II/III-like protein BM525_14765 PF13419 Haloacid dehalogenase-like hydrolase BM525_14770 PF00005 ABC transporter BM525_14770 PF08402 TOBE domain BM525_14775 PF00528 Binding-protein-dependent transport system inner membrane component BM525_14780 PF00528 Binding-protein-dependent transport system inner membrane component BM525_14795 PF12697 Alpha/beta hydrolase family BM525_14800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BM525_14800 PF13360 PQQ-like domain BM525_14825 PF00005 ABC transporter BM525_14835 PF00883 Cytosol aminopeptidase family, catalytic domain BM525_14835 PF02789 Cytosol aminopeptidase family, N-terminal domain BM525_14840 PF12706 Beta-lactamase superfamily domain BM525_14845 PF03070 TENA/THI-4/PQQC family BM525_14850 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BM525_14855 PF13186 Iron-sulfur cluster-binding domain BM525_14855 PF04055 Radical SAM superfamily BM525_14880 PF00196 Bacterial regulatory proteins, luxR family BM525_14880 PF00072 Response regulator receiver domain BM525_14885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_14885 PF00512 His Kinase A (phospho-acceptor) domain BM525_14895 PF04205 FMN-binding domain BM525_14895 PF12801 4Fe-4S binding domain BM525_14900 PF00171 Aldehyde dehydrogenase family BM525_14905 PF00072 Response regulator receiver domain BM525_14905 PF00196 Bacterial regulatory proteins, luxR family BM525_14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_14910 PF07730 Histidine kinase BM525_14910 PF05231 MASE1 BM525_14915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_14915 PF03466 LysR substrate binding domain BM525_14920 PF00171 Aldehyde dehydrogenase family BM525_14925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BM525_14925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM525_14940 PF02028 BCCT, betaine/carnitine/choline family transporter BM525_14945 PF09330 D-lactate dehydrogenase, membrane binding BM525_14945 PF01565 FAD binding domain BM525_14950 PF00196 Bacterial regulatory proteins, luxR family BM525_14955 PF03783 Curli production assembly/transport component CsgG BM525_14980 PF00082 Subtilase family BM525_14985 PF00072 Response regulator receiver domain BM525_14985 PF00196 Bacterial regulatory proteins, luxR family BM525_14995 PF00106 short chain dehydrogenase BM525_15010 PF00270 DEAD/DEAH box helicase BM525_15010 PF00271 Helicase conserved C-terminal domain BM525_15015 PF08447 PAS fold BM525_15015 PF08448 PAS fold BM525_15015 PF00990 Diguanylate cyclase, GGDEF domain BM525_15015 PF00563 EAL domain BM525_15025 PF01081 KDPG and KHG aldolase BM525_15030 PF00294 pfkB family carbohydrate kinase BM525_15035 PF14592 Chondroitinase B BM525_15040 PF07729 FCD domain BM525_15040 PF00392 Bacterial regulatory proteins, gntR family BM525_15045 PF12794 Mechanosensitive ion channel inner membrane domain 1 BM525_15045 PF12795 Mechanosensitive ion channel porin domain BM525_15045 PF00924 Mechanosensitive ion channel BM525_15055 PF00141 Peroxidase BM525_15075 PF03466 LysR substrate binding domain BM525_15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_15085 PF01925 Sulfite exporter TauE/SafE BM525_15095 PF08769 Sporulation initiation factor Spo0A C terminal BM525_15095 PF00072 Response regulator receiver domain BM525_15105 PF00512 His Kinase A (phospho-acceptor) domain BM525_15105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_15115 PF03104 DNA polymerase family B, exonuclease domain BM525_15115 PF00136 DNA polymerase family B BM525_15125 PF00501 AMP-binding enzyme BM525_15125 PF13193 AMP-binding enzyme C-terminal domain BM525_15160 PF05958 tRNA (Uracil-5-)-methyltransferase BM525_15165 PF00440 Bacterial regulatory proteins, tetR family BM525_15175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM525_15175 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_15185 PF03167 Uracil DNA glycosylase superfamily BM525_15190 PF03707 Bacterial signalling protein N terminal repeat BM525_15190 PF00563 EAL domain BM525_15190 PF00990 Diguanylate cyclase, GGDEF domain BM525_15200 PF01507 Phosphoadenosine phosphosulfate reductase family BM525_15205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BM525_15205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BM525_15210 PF00667 FAD binding domain BM525_15210 PF00258 Flavodoxin BM525_15210 PF00175 Oxidoreductase NAD-binding domain BM525_15230 PF04024 PspC domain BM525_15235 PF04012 PspA/IM30 family BM525_15245 PF01207 Dihydrouridine synthase (Dus) BM525_15265 PF02435 Levansucrase/Invertase BM525_15270 PF00251 Glycosyl hydrolases family 32 N-terminal domain BM525_15270 PF08244 Glycosyl hydrolases family 32 C terminal BM525_15295 PF00534 Glycosyl transferases group 1 BM525_15310 PF00535 Glycosyl transferase family 2 BM525_15310 PF02709 N-terminal domain of galactosyltransferase BM525_15325 PF05362 Lon protease (S16) C-terminal proteolytic domain BM525_15325 PF00004 ATPase family associated with various cellular activities (AAA) BM525_15325 PF02190 ATP-dependent protease La (LON) substrate-binding domain BM525_15330 PF00563 EAL domain BM525_15330 PF03707 Bacterial signalling protein N terminal repeat BM525_15330 PF00990 Diguanylate cyclase, GGDEF domain BM525_15335 PF00756 Putative esterase BM525_15340 PF01553 Acyltransferase BM525_15345 PF01553 Acyltransferase BM525_15350 PF00924 Mechanosensitive ion channel BM525_15365 PF01370 NAD dependent epimerase/dehydratase family BM525_15370 PF00209 Sodium:neurotransmitter symporter family BM525_15375 PF00106 short chain dehydrogenase BM525_15385 PF01625 Peptide methionine sulfoxide reductase BM525_15400 PF00258 Flavodoxin BM525_15410 PF02472 Biopolymer transport protein ExbD/TolR BM525_15420 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BM525_15420 PF13181 Tetratricopeptide repeat BM525_15425 PF01270 Glycosyl hydrolases family 8 BM525_15435 PF00535 Glycosyl transferase family 2 BM525_15435 PF03552 Cellulose synthase BM525_15435 PF07238 PilZ domain BM525_15450 PF05175 Methyltransferase small domain BM525_15455 PF13460 NAD(P)H-binding BM525_15460 PF00326 Prolyl oligopeptidase family BM525_15460 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BM525_15465 PF08000 Bacterial PH domain BM525_15470 PF00563 EAL domain BM525_15470 PF00990 Diguanylate cyclase, GGDEF domain BM525_15470 PF08448 PAS fold BM525_15475 PF00291 Pyridoxal-phosphate dependent enzyme BM525_15480 PF07969 Amidohydrolase family BM525_15490 PF00753 Metallo-beta-lactamase superfamily BM525_15500 PF03466 LysR substrate binding domain BM525_15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_15505 PF13230 Glutamine amidotransferases class-II BM525_15515 PF05360 yiaA/B two helix domain BM525_15535 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BM525_15540 PF00593 TonB dependent receptor BM525_15540 PF07715 TonB-dependent Receptor Plug Domain BM525_15545 PF00171 Aldehyde dehydrogenase family BM525_15550 PF01613 Flavin reductase like domain BM525_15555 PF00881 Nitroreductase family BM525_15560 PF00561 alpha/beta hydrolase fold BM525_15565 PF01042 Endoribonuclease L-PSP BM525_15570 PF00857 Isochorismatase family BM525_15575 PF00296 Luciferase-like monooxygenase BM525_15580 PF00440 Bacterial regulatory proteins, tetR family BM525_15580 PF08362 YcdC-like protein, C-terminal region BM525_15595 PF09905 DNA-binding protein VF530 BM525_15605 PF01204 Trehalase BM525_15610 PF02447 GntP family permease BM525_15615 PF01202 Shikimate kinase BM525_15620 PF00356 Bacterial regulatory proteins, lacI family BM525_15625 PF00753 Metallo-beta-lactamase superfamily BM525_15625 PF16123 Hydroxyacylglutathione hydrolase C-terminus BM525_15635 PF00817 impB/mucB/samB family BM525_15635 PF11798 IMS family HHH motif BM525_15635 PF11799 impB/mucB/samB family C-terminal domain BM525_15640 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BM525_15645 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BM525_15655 PF02424 ApbE family BM525_15660 PF00111 2Fe-2S iron-sulfur cluster binding domain BM525_15660 PF00175 Oxidoreductase NAD-binding domain BM525_15660 PF00970 Oxidoreductase FAD-binding domain BM525_15665 PF02508 Rnf-Nqr subunit, membrane protein BM525_15670 PF02508 Rnf-Nqr subunit, membrane protein BM525_15675 PF04205 FMN-binding domain BM525_15680 PF03116 NQR2, RnfD, RnfE family BM525_15685 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BM525_15685 PF11973 NQRA C-terminal domain BM525_15690 PF07055 Enoyl reductase FAD binding domain BM525_15690 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BM525_15690 PF12241 Trans-2-enoyl-CoA reductase catalytic region BM525_15695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BM525_15695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM525_15700 PF00311 Phosphoenolpyruvate carboxylase BM525_15705 PF00141 Peroxidase BM525_15715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BM525_15715 PF00056 lactate/malate dehydrogenase, NAD binding domain BM525_15720 PF02863 Arginine repressor, C-terminal domain BM525_15720 PF01316 Arginine repressor, DNA binding domain BM525_15745 PF00485 Phosphoribulokinase / Uridine kinase family BM525_15750 PF07662 Na+ dependent nucleoside transporter C-terminus BM525_15750 PF07670 Nucleoside recognition BM525_15750 PF01773 Na+ dependent nucleoside transporter N-terminus BM525_15770 PF00072 Response regulator receiver domain BM525_15770 PF00990 Diguanylate cyclase, GGDEF domain BM525_15775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM525_15775 PF14579 Helix-hairpin-helix motif BM525_15775 PF00929 Exonuclease BM525_15775 PF02811 PHP domain BM525_15775 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM525_15780 PF00571 CBS domain BM525_15785 PF00474 Sodium:solute symporter family BM525_15795 PF00512 His Kinase A (phospho-acceptor) domain BM525_15795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_15795 PF07689 KaiB domain BM525_15805 PF18030 RimK PreATP-grasp domain BM525_15805 PF08443 RimK-like ATP-grasp domain BM525_15815 PF08443 RimK-like ATP-grasp domain BM525_15815 PF18030 RimK PreATP-grasp domain BM525_15825 PF00072 Response regulator receiver domain BM525_15825 PF00196 Bacterial regulatory proteins, luxR family BM525_15840 PF02690 Na+/Pi-cotransporter BM525_15845 PF00248 Aldo/keto reductase family BM525_15855 PF00082 Subtilase family BM525_15870 PF03793 PASTA domain BM525_15870 PF00069 Protein kinase domain BM525_15875 PF07730 Histidine kinase BM525_15875 PF17200 Single Cache domain 2 BM525_15880 PF00072 Response regulator receiver domain BM525_15880 PF00196 Bacterial regulatory proteins, luxR family BM525_15885 PF00082 Subtilase family BM525_15910 PF16655 PhoD-like phosphatase, N-terminal domain BM525_15910 PF09423 PhoD-like phosphatase BM525_15920 PF06628 Catalase-related immune-responsive BM525_15920 PF00199 Catalase BM525_15960 PF00005 ABC transporter BM525_15960 PF00664 ABC transporter transmembrane region BM525_15960 PF03412 Peptidase C39 family BM525_15965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_15965 PF03466 LysR substrate binding domain BM525_15990 PF00483 Nucleotidyl transferase BM525_15990 PF01050 Mannose-6-phosphate isomerase BM525_15995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BM525_15995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BM525_15995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BM525_16000 PF00535 Glycosyl transferase family 2 BM525_16005 PF16363 GDP-mannose 4,6 dehydratase BM525_16010 PF04321 RmlD substrate binding domain BM525_16015 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BM525_16020 PF00483 Nucleotidyl transferase BM525_16025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM525_16025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM525_16025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM525_16025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM525_16030 PF01380 SIS domain BM525_16070 PF00535 Glycosyl transferase family 2 BM525_16075 PF08666 SAF domain BM525_16075 PF03102 NeuB family BM525_16090 PF02348 Cytidylyltransferase BM525_16095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM525_16100 PF02719 Polysaccharide biosynthesis protein BM525_16120 PF01196 Ribosomal protein L17 BM525_16125 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BM525_16125 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BM525_16125 PF01000 RNA polymerase Rpb3/RpoA insert domain BM525_16130 PF00163 Ribosomal protein S4/S9 N-terminal domain BM525_16130 PF01479 S4 domain BM525_16135 PF00411 Ribosomal protein S11 BM525_16140 PF00416 Ribosomal protein S13/S18 BM525_16145 PF00444 Ribosomal protein L36 BM525_16150 PF00344 SecY translocase BM525_16155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BM525_16160 PF00327 Ribosomal protein L30p/L7e BM525_16165 PF03719 Ribosomal protein S5, C-terminal domain BM525_16165 PF00333 Ribosomal protein S5, N-terminal domain BM525_16170 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BM525_16175 PF00347 Ribosomal protein L6 BM525_16180 PF00410 Ribosomal protein S8 BM525_16185 PF00253 Ribosomal protein S14p/S29e BM525_16190 PF00281 Ribosomal protein L5 BM525_16190 PF00673 ribosomal L5P family C-terminus BM525_16195 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BM525_16195 PF00467 KOW motif BM525_16200 PF00238 Ribosomal protein L14p/L23e BM525_16205 PF09308 LuxQ, periplasmic BM525_16205 PF00512 His Kinase A (phospho-acceptor) domain BM525_16205 PF00072 Response regulator receiver domain BM525_16205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_16220 PF08032 RNA 2'-O ribose methyltransferase substrate binding BM525_16220 PF00588 SpoU rRNA Methylase family BM525_16225 PF17876 Cold shock domain BM525_16225 PF08461 Ribonuclease R winged-helix domain BM525_16225 PF00575 S1 RNA binding domain BM525_16225 PF00773 RNB domain BM525_16225 PF08206 Ribonuclease B OB domain BM525_16240 PF09423 PhoD-like phosphatase BM525_16240 PF16655 PhoD-like phosphatase, N-terminal domain BM525_16245 PF00593 TonB dependent receptor BM525_16245 PF07715 TonB-dependent Receptor Plug Domain BM525_16260 PF08238 Sel1 repeat BM525_16270 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BM525_16275 PF00175 Oxidoreductase NAD-binding domain BM525_16285 PF04389 Peptidase family M28 BM525_16295 PF00360 Phytochrome region BM525_16295 PF08446 PAS fold BM525_16295 PF00512 His Kinase A (phospho-acceptor) domain BM525_16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_16295 PF01590 GAF domain BM525_16315 PF01654 Cytochrome bd terminal oxidase subunit I BM525_16320 PF02322 Cytochrome bd terminal oxidase subunit II BM525_16325 PF01037 Lrp/AsnC ligand binding domain BM525_16325 PF13404 AsnC-type helix-turn-helix domain BM525_16335 PF00313 'Cold-shock' DNA-binding domain BM525_16340 PF03109 ABC1 family BM525_16350 PF01209 ubiE/COQ5 methyltransferase family BM525_16360 PF01432 Peptidase family M3 BM525_16365 PF00072 Response regulator receiver domain BM525_16375 PF00512 His Kinase A (phospho-acceptor) domain BM525_16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_16375 PF00989 PAS fold BM525_16380 PF00158 Sigma-54 interaction domain BM525_16380 PF02954 Bacterial regulatory protein, Fis family BM525_16380 PF00072 Response regulator receiver domain BM525_16385 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_16385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM525_16390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BM525_16390 PF00384 Molybdopterin oxidoreductase BM525_16390 PF01568 Molydopterin dinucleotide binding domain BM525_16395 PF00326 Prolyl oligopeptidase family BM525_16395 PF07676 WD40-like Beta Propeller Repeat BM525_16445 PF00664 ABC transporter transmembrane region BM525_16445 PF03412 Peptidase C39 family BM525_16445 PF00005 ABC transporter BM525_16450 PF00196 Bacterial regulatory proteins, luxR family BM525_16450 PF00072 Response regulator receiver domain BM525_16470 PF00356 Bacterial regulatory proteins, lacI family BM525_16475 PF01306 LacY proton/sugar symporter BM525_16480 PF00251 Glycosyl hydrolases family 32 N-terminal domain BM525_16480 PF08244 Glycosyl hydrolases family 32 C terminal BM525_16485 PF00083 Sugar (and other) transporter BM525_16495 PF00593 TonB dependent receptor BM525_16495 PF07715 TonB-dependent Receptor Plug Domain BM525_16500 PF07724 AAA domain (Cdc48 subfamily) BM525_16500 PF00004 ATPase family associated with various cellular activities (AAA) BM525_16505 PF00227 Proteasome subunit BM525_16510 PF00313 'Cold-shock' DNA-binding domain BM525_16515 PF05036 Sporulation related domain BM525_16520 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BM525_16520 PF18074 Primosomal protein N C-terminal domain BM525_16520 PF17764 3′ DNA-binding domain (3′BD) BM525_16520 PF00271 Helicase conserved C-terminal domain BM525_16520 PF00270 DEAD/DEAH box helicase BM525_16525 PF01197 Ribosomal protein L31 BM525_16535 PF03949 Malic enzyme, NAD binding domain BM525_16535 PF00390 Malic enzyme, N-terminal domain BM525_16540 PF01340 Met Apo-repressor, MetJ BM525_16545 PF02219 Methylenetetrahydrofolate reductase BM525_16550 PF03631 Virulence factor BrkB BM525_16565 PF00561 alpha/beta hydrolase fold BM525_16570 PF02580 D-Tyr-tRNA(Tyr) deacylase BM525_16575 PF00583 Acetyltransferase (GNAT) family BM525_16575 PF09500 Putative thioesterase (yiiD_Cterm) BM525_16580 PF04545 Sigma-70, region 4 BM525_16580 PF00140 Sigma-70 factor, region 1.2 BM525_16580 PF04542 Sigma-70 region 2 BM525_16585 PF08668 HDOD domain BM525_16585 PF00563 EAL domain BM525_16590 PF08668 HDOD domain BM525_16590 PF00563 EAL domain BM525_16595 PF18075 FtsX extracellular domain BM525_16600 PF00005 ABC transporter BM525_16605 PF02881 SRP54-type protein, helical bundle domain BM525_16605 PF00448 SRP54-type protein, GTPase domain BM525_16620 PF01914 MarC family integral membrane protein BM525_16630 PF00883 Cytosol aminopeptidase family, catalytic domain BM525_16630 PF12404 Peptidase BM525_16635 PF03749 Sugar fermentation stimulation protein RE domain BM525_16635 PF17746 SfsA N-terminal OB domain BM525_16640 PF01258 Prokaryotic dksA/traR C4-type zinc finger BM525_16645 PF00749 tRNA synthetases class I (E and Q), catalytic domain BM525_16650 PF12626 Polymerase A arginine-rich C-terminus BM525_16650 PF12627 Probable RNA and SrmB- binding site of polymerase A BM525_16650 PF01743 Poly A polymerase head domain BM525_16655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BM525_16660 PF02548 Ketopantoate hydroxymethyltransferase BM525_16665 PF02569 Pantoate-beta-alanine ligase BM525_16670 PF00282 Pyridoxal-dependent decarboxylase conserved domain BM525_16685 PF01061 ABC-2 type transporter BM525_16690 PF00005 ABC transporter BM525_16695 PF00486 Transcriptional regulatory protein, C terminal BM525_16695 PF00072 Response regulator receiver domain BM525_16700 PF00512 His Kinase A (phospho-acceptor) domain BM525_16700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_16700 PF00672 HAMP domain BM525_16705 PF07715 TonB-dependent Receptor Plug Domain BM525_16705 PF00593 TonB dependent receptor BM525_16710 PF18331 PKHD-type hydroxylase C-terminal domain BM525_16710 PF13640 2OG-Fe(II) oxygenase superfamily BM525_16730 PF01595 Cyclin M transmembrane N-terminal domain BM525_16730 PF00571 CBS domain BM525_16740 PF13722 5TM C-terminal transporter carbon starvation CstA BM525_16740 PF02554 Carbon starvation protein CstA BM525_16760 PF07963 Prokaryotic N-terminal methylation motif BM525_16760 PF00114 Pilin (bacterial filament) BM525_16765 PF00009 Elongation factor Tu GTP binding domain BM525_16765 PF03144 Elongation factor Tu domain 2 BM525_16765 PF03143 Elongation factor Tu C-terminal domain BM525_16770 PF03144 Elongation factor Tu domain 2 BM525_16770 PF03764 Elongation factor G, domain IV BM525_16770 PF14492 Elongation Factor G, domain II BM525_16770 PF00009 Elongation factor Tu GTP binding domain BM525_16770 PF00679 Elongation factor G C-terminus BM525_16775 PF00177 Ribosomal protein S7p/S5e BM525_16780 PF00164 Ribosomal protein S12/S23 BM525_16785 PF05000 RNA polymerase Rpb1, domain 4 BM525_16785 PF04983 RNA polymerase Rpb1, domain 3 BM525_16785 PF04998 RNA polymerase Rpb1, domain 5 BM525_16785 PF00623 RNA polymerase Rpb1, domain 2 BM525_16785 PF04997 RNA polymerase Rpb1, domain 1 BM525_16790 PF04563 RNA polymerase beta subunit BM525_16790 PF04560 RNA polymerase Rpb2, domain 7 BM525_16790 PF00562 RNA polymerase Rpb2, domain 6 BM525_16790 PF04565 RNA polymerase Rpb2, domain 3 BM525_16790 PF10385 RNA polymerase beta subunit external 1 domain BM525_16790 PF04561 RNA polymerase Rpb2, domain 2 BM525_16795 PF16320 Ribosomal protein L7/L12 dimerisation domain BM525_16795 PF00542 Ribosomal protein L7/L12 C-terminal domain BM525_16800 PF00466 Ribosomal protein L10 BM525_16805 PF00687 Ribosomal protein L1p/L10e family BM525_16810 PF03946 Ribosomal protein L11, N-terminal domain BM525_16810 PF00298 Ribosomal protein L11, RNA binding domain BM525_16830 PF00467 KOW motif BM525_16830 PF02357 Transcription termination factor nusG BM525_16835 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BM525_16845 PF00664 ABC transporter transmembrane region BM525_16845 PF00005 ABC transporter BM525_16850 PF03737 Aldolase/RraA BM525_16855 PF05649 Peptidase family M13 BM525_16855 PF01431 Peptidase family M13 BM525_16865 PF00271 Helicase conserved C-terminal domain BM525_16865 PF00270 DEAD/DEAH box helicase BM525_16865 PF03880 DbpA RNA binding domain BM525_16870 PF01979 Amidohydrolase family BM525_16875 PF08212 Lipocalin-like domain BM525_16880 PF00248 Aldo/keto reductase family BM525_16885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM525_16890 PF00924 Mechanosensitive ion channel BM525_16890 PF05552 Conserved TM helix BM525_16895 PF07690 Major Facilitator Superfamily BM525_16900 PF00128 Alpha amylase, catalytic domain BM525_16910 PF01227 GTP cyclohydrolase I BM525_16920 PF04371 Porphyromonas-type peptidyl-arginine deiminase BM525_16925 PF00795 Carbon-nitrogen hydrolase BM525_16935 PF08494 DEAD/H associated BM525_16935 PF00271 Helicase conserved C-terminal domain BM525_16935 PF00270 DEAD/DEAH box helicase BM525_16945 PF04679 ATP dependent DNA ligase C terminal region BM525_16945 PF04675 DNA ligase N terminus BM525_16945 PF01068 ATP dependent DNA ligase domain BM525_16950 PF01132 Elongation factor P (EF-P) OB domain BM525_16950 PF09285 Elongation factor P, C-terminal BM525_16950 PF08207 Elongation factor P (EF-P) KOW-like domain BM525_16955 PF00294 pfkB family carbohydrate kinase BM525_16970 PF00043 Glutathione S-transferase, C-terminal domain BM525_16970 PF02798 Glutathione S-transferase, N-terminal domain BM525_16975 PF02798 Glutathione S-transferase, N-terminal domain BM525_16985 PF00561 alpha/beta hydrolase fold BM525_17000 PF00171 Aldehyde dehydrogenase family BM525_17005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BM525_17005 PF00205 Thiamine pyrophosphate enzyme, central domain BM525_17005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BM525_17015 PF00762 Ferrochelatase BM525_17020 PF03806 AbgT putative transporter family BM525_17025 PF01145 SPFH domain / Band 7 family BM525_17030 PF12221 Bacterial membrane protein N terminal BM525_17030 PF01145 SPFH domain / Band 7 family BM525_17035 PF01926 50S ribosome-binding GTPase BM525_17035 PF16360 GTP-binding GTPase Middle Region BM525_17035 PF13167 GTP-binding GTPase N-terminal BM525_17040 PF17209 Hfq protein BM525_17050 PF01119 DNA mismatch repair protein, C-terminal domain BM525_17050 PF08676 MutL C terminal dimerisation domain BM525_17055 PF01520 N-acetylmuramoyl-L-alanine amidase BM525_17060 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BM525_17065 PF01256 Carbohydrate kinase BM525_17065 PF03853 YjeF-related protein N-terminus BM525_17070 PF08331 Domain of unknown function (DUF1730) BM525_17080 PF01208 Uroporphyrinogen decarboxylase (URO-D) BM525_17085 PF09297 NADH pyrophosphatase zinc ribbon domain BM525_17085 PF00293 NUDIX domain BM525_17090 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BM525_17095 PF01475 Ferric uptake regulator family BM525_17105 PF01894 Uncharacterised protein family UPF0047 BM525_17110 PF05736 OprF membrane domain BM525_17110 PF00691 OmpA family BM525_17115 PF03796 DnaB-like helicase C terminal domain BM525_17115 PF00772 DnaB-like helicase N terminal domain BM525_17140 PF03475 3-alpha domain BM525_17140 PF03473 MOSC domain BM525_17155 PF00072 Response regulator receiver domain BM525_17155 PF00486 Transcriptional regulatory protein, C terminal BM525_17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_17160 PF00512 His Kinase A (phospho-acceptor) domain BM525_17160 PF16750 Sensor domain of 2-component histidine kinase BM525_17160 PF00672 HAMP domain BM525_17180 PF00873 AcrB/AcrD/AcrF family BM525_17185 PF01281 Ribosomal protein L9, N-terminal domain BM525_17185 PF03948 Ribosomal protein L9, C-terminal domain BM525_17190 PF01084 Ribosomal protein S18 BM525_17195 PF01250 Ribosomal protein S6 BM525_17200 PF00512 His Kinase A (phospho-acceptor) domain BM525_17200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_17200 PF01627 Hpt domain BM525_17200 PF00072 Response regulator receiver domain BM525_17200 PF00672 HAMP domain BM525_17210 PF02687 FtsX-like permease family BM525_17210 PF00005 ABC transporter BM525_17210 PF12704 MacB-like periplasmic core domain BM525_17220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_17220 PF08447 PAS fold BM525_17225 PF00512 His Kinase A (phospho-acceptor) domain BM525_17225 PF00989 PAS fold BM525_17225 PF13188 PAS domain BM525_17225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_17225 PF13426 PAS domain BM525_17230 PF02743 Cache domain BM525_17230 PF00672 HAMP domain BM525_17230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM525_17245 PF03601 Conserved hypothetical protein 698 BM525_17250 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BM525_17255 PF00248 Aldo/keto reductase family BM525_17270 PF17137 Domain of unknown function (DUF5110) BM525_17270 PF16338 Domain of unknown function (DUF4968) BM525_17270 PF13802 Galactose mutarotase-like BM525_17270 PF01055 Glycosyl hydrolases family 31 BM525_17275 PF00474 Sodium:solute symporter family BM525_17280 PF07715 TonB-dependent Receptor Plug Domain BM525_17280 PF00593 TonB dependent receptor BM525_17285 PF01545 Cation efflux family BM525_17285 PF16916 Dimerisation domain of Zinc Transporter BM525_17290 PF00722 Glycosyl hydrolases family 16 BM525_17305 PF00933 Glycosyl hydrolase family 3 N terminal domain BM525_17305 PF01915 Glycosyl hydrolase family 3 C-terminal domain BM525_17305 PF14310 Fibronectin type III-like domain BM525_17310 PF07690 Major Facilitator Superfamily BM525_17315 PF00232 Glycosyl hydrolase family 1 BM525_17320 PF00356 Bacterial regulatory proteins, lacI family BM525_17325 PF00083 Sugar (and other) transporter BM525_17330 PF00664 ABC transporter transmembrane region BM525_17330 PF00005 ABC transporter BM525_17335 PF00005 ABC transporter BM525_17335 PF00664 ABC transporter transmembrane region BM525_17340 PF08173 Membrane bound YbgT-like protein BM525_17345 PF02322 Cytochrome bd terminal oxidase subunit II BM525_17350 PF01654 Cytochrome bd terminal oxidase subunit I BM525_17360 PF02954 Bacterial regulatory protein, Fis family BM525_17360 PF00072 Response regulator receiver domain BM525_17360 PF00158 Sigma-54 interaction domain BM525_17385 PF13474 SnoaL-like domain BM525_17395 PF07715 TonB-dependent Receptor Plug Domain BM525_17395 PF00593 TonB dependent receptor BM525_17410 PF02649 Type I GTP cyclohydrolase folE2 BM525_17425 PF08021 Siderophore-interacting FAD-binding domain BM525_17425 PF04954 Siderophore-interacting protein BM525_17430 PF05532 CsbD-like BM525_17445 PF04542 Sigma-70 region 2 BM525_17445 PF08281 Sigma-70, region 4 BM525_17450 PF05922 Peptidase inhibitor I9 BM525_17450 PF00082 Subtilase family BM525_17470 PF00472 RF-1 domain BM525_17475 PF00561 alpha/beta hydrolase fold BM525_17475 PF00364 Biotin-requiring enzyme BM525_17495 PF01292 Prokaryotic cytochrome b561 BM525_17500 PF04264 YceI-like domain BM525_17505 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM525_17510 PF07715 TonB-dependent Receptor Plug Domain BM525_17510 PF00593 TonB dependent receptor BM525_17520 PF03466 LysR substrate binding domain BM525_17520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_17525 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BM525_17530 PF00107 Zinc-binding dehydrogenase BM525_17530 PF16884 N-terminal domain of oxidoreductase BM525_17535 PF01590 GAF domain BM525_17535 PF00990 Diguanylate cyclase, GGDEF domain BM525_17535 PF00360 Phytochrome region BM525_17535 PF00563 EAL domain BM525_17540 PF00512 His Kinase A (phospho-acceptor) domain BM525_17540 PF00072 Response regulator receiver domain BM525_17540 PF09308 LuxQ, periplasmic BM525_17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_17550 PF00296 Luciferase-like monooxygenase BM525_17555 PF01380 SIS domain BM525_17560 PF00455 DeoR C terminal sensor domain BM525_17560 PF08220 DeoR-like helix-turn-helix domain BM525_17565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM525_17565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM525_17570 PF12804 MobA-like NTP transferase domain BM525_17570 PF14602 Hexapeptide repeat of succinyl-transferase BM525_17570 PF00132 Bacterial transferase hexapeptide (six repeats) BM525_17580 PF00892 EamA-like transporter family BM525_17585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BM525_17585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BM525_17590 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BM525_17590 PF00730 HhH-GPD superfamily base excision DNA repair protein BM525_17595 PF00144 Beta-lactamase BM525_17600 PF17810 Arginine decarboxylase helical bundle domain BM525_17600 PF17944 Arginine decarboxylase C-terminal helical extension BM525_17600 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BM525_17610 PF02233 NAD(P) transhydrogenase beta subunit BM525_17615 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BM525_17620 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BM525_17620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BM525_17695 PF02796 Helix-turn-helix domain of resolvase BM525_17695 PF00239 Resolvase, N terminal domain BM525_17705 PF00075 RNase H BM525_17720 PF00118 TCP-1/cpn60 chaperonin family BM525_17725 PF00166 Chaperonin 10 Kd subunit BM525_17730 PF04186 FxsA cytoplasmic membrane protein BM525_17735 PF03091 CutA1 divalent ion tolerance protein BM525_17740 PF02683 Cytochrome C biogenesis protein transmembrane region BM525_17740 PF11412 Disulphide bond corrector protein DsbC BM525_17745 PF01551 Peptidase family M23 BM525_17750 PF01220 Dehydroquinase class II BM525_17755 PF00364 Biotin-requiring enzyme BM525_17760 PF02785 Biotin carboxylase C-terminal domain BM525_17760 PF00289 Biotin carboxylase, N-terminal domain BM525_17760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BM525_17780 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM525_17780 PF00929 Exonuclease BM525_17780 PF02811 PHP domain BM525_17780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM525_17780 PF11490 DNA polymerase III polC-type N-terminus II BM525_17780 PF14579 Helix-hairpin-helix motif BM525_17795 PF01355 High potential iron-sulfur protein BM525_17800 PF01425 Amidase BM525_17815 PF01207 Dihydrouridine synthase (Dus) BM525_17820 PF02954 Bacterial regulatory protein, Fis family BM525_17825 PF01808 AICARFT/IMPCHase bienzyme BM525_17825 PF02142 MGS-like domain BM525_17835 PF02844 Phosphoribosylglycinamide synthetase, N domain BM525_17835 PF02843 Phosphoribosylglycinamide synthetase, C domain BM525_17835 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BM525_17855 PF00520 Ion transport protein BM525_17855 PF00027 Cyclic nucleotide-binding domain BM525_17860 PF00485 Phosphoribulokinase / Uridine kinase family BM525_17870 PF00486 Transcriptional regulatory protein, C terminal BM525_17870 PF00072 Response regulator receiver domain BM525_17875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_17875 PF00512 His Kinase A (phospho-acceptor) domain BM525_17875 PF00672 HAMP domain BM525_17885 PF16338 Domain of unknown function (DUF4968) BM525_17885 PF01055 Glycosyl hydrolases family 31 BM525_17885 PF13802 Galactose mutarotase-like BM525_17885 PF17137 Domain of unknown function (DUF5110) BM525_17965 PF01430 Hsp33 protein BM525_17970 PF01479 S4 domain BM525_17975 PF11356 Type II secretion system protein C BM525_17980 PF00263 Bacterial type II and III secretion system protein BM525_17980 PF03958 Bacterial type II/III secretion system short domain BM525_17985 PF00437 Type II/IV secretion system protein BM525_17990 PF00482 Type II secretion system (T2SS), protein F BM525_17995 PF07963 Prokaryotic N-terminal methylation motif BM525_17995 PF08334 Type II secretion system (T2SS), protein G BM525_18000 PF12019 Type II transport protein GspH BM525_18005 PF02501 Type II secretion system (T2SS), protein I BM525_18005 PF07963 Prokaryotic N-terminal methylation motif BM525_18010 PF07963 Prokaryotic N-terminal methylation motif BM525_18010 PF11612 Type II secretion system (T2SS), protein J BM525_18020 PF05134 Type II secretion system (T2SS), protein L BM525_18020 PF12693 GspL periplasmic domain BM525_18025 PF04612 Type II secretion system (T2SS), protein M BM525_18040 PF00171 Aldehyde dehydrogenase family BM525_18045 PF01931 Protein of unknown function DUF84 BM525_18050 PF13419 Haloacid dehalogenase-like hydrolase BM525_18055 PF00293 NUDIX domain BM525_18060 PF00459 Inositol monophosphatase family BM525_18075 PF04349 Periplasmic glucan biosynthesis protein, MdoG BM525_18085 PF06794 Uncharacterised protein family (UPF0270) BM525_18090 PF00561 alpha/beta hydrolase fold BM525_18100 PF00005 ABC transporter BM525_18100 PF12848 ABC transporter BM525_18115 PF04102 SlyX BM525_18125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM525_18125 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BM525_18135 PF01272 Transcription elongation factor, GreA/GreB, C-term BM525_18135 PF03449 Transcription elongation factor, N-terminal BM525_18140 PF09371 Tex-like protein N-terminal domain BM525_18140 PF17674 HHH domain BM525_18140 PF16921 Tex protein YqgF-like domain BM525_18140 PF00575 S1 RNA binding domain BM525_18160 PF00561 alpha/beta hydrolase fold BM525_18165 PF00156 Phosphoribosyl transferase domain BM525_18175 PF01521 Iron-sulphur cluster biosynthesis BM525_18175 PF01106 NifU-like domain BM525_18185 PF01177 Asp/Glu/Hydantoin racemase BM525_18200 PF01554 MatE BM525_18205 PF01522 Polysaccharide deacetylase BM525_18205 PF14883 Hypothetical glycosyl hydrolase family 13 BM525_18215 PF02630 SCO1/SenC BM525_18220 PF01040 UbiA prenyltransferase family BM525_18225 PF02628 Cytochrome oxidase assembly protein BM525_18245 PF00510 Cytochrome c oxidase subunit III BM525_18250 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BM525_18255 PF00115 Cytochrome C and Quinol oxidase polypeptide I BM525_18260 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BM525_18260 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BM525_18265 PF00717 Peptidase S24-like BM525_18265 PF01726 LexA DNA binding domain BM525_18270 PF01553 Acyltransferase BM525_18275 PF00585 C-terminal regulatory domain of Threonine dehydratase BM525_18275 PF00291 Pyridoxal-phosphate dependent enzyme BM525_18280 PF00920 Dehydratase family BM525_18285 PF03458 UPF0126 domain BM525_18290 PF01078 Magnesium chelatase, subunit ChlI BM525_18290 PF13335 Magnesium chelatase, subunit ChlI C-terminal BM525_18295 PF03466 LysR substrate binding domain BM525_18295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM525_18300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BM525_18300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BM525_18305 PF07690 Major Facilitator Superfamily BM525_18310 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) BM525_18315 PF07244 Surface antigen variable number repeat BM525_18315 PF01103 Surface antigen BM525_18315 PF17243 POTRA domain TamA domain 1 BM525_18320 PF04357 TamB, inner membrane protein subunit of TAM complex BM525_18345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM525_18345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM525_18355 PF00696 Amino acid kinase family BM525_18355 PF01472 PUA domain BM525_18375 PF03109 ABC1 family BM525_18400 PF01979 Amidohydrolase family BM525_18425 PF01206 Sulfurtransferase TusA BM525_18430 PF00156 Phosphoribosyl transferase domain BM525_18435 PF03725 3' exoribonuclease family, domain 2 BM525_18435 PF01138 3' exoribonuclease family, domain 1 BM525_18440 PF03755 YicC-like family, N-terminal region BM525_18440 PF08340 Domain of unknown function (DUF1732) BM525_18445 PF04820 Tryptophan halogenase BM525_18460 PF00232 Glycosyl hydrolase family 1 BM525_18470 PF00356 Bacterial regulatory proteins, lacI family BM525_18480 PF00691 OmpA family BM525_18480 PF05736 OprF membrane domain BM525_18485 PF01966 HD domain BM525_18500 PF00043 Glutathione S-transferase, C-terminal domain BM525_18500 PF02798 Glutathione S-transferase, N-terminal domain BM525_18510 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BM525_18510 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BM525_18515 PF02874 ATP synthase alpha/beta family, beta-barrel domain BM525_18515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM525_18520 PF00231 ATP synthase BM525_18525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM525_18525 PF00306 ATP synthase alpha/beta chain, C terminal domain BM525_18525 PF02874 ATP synthase alpha/beta family, beta-barrel domain BM525_18530 PF00213 ATP synthase delta (OSCP) subunit BM525_18535 PF00430 ATP synthase B/B' CF(0) BM525_18540 PF00137 ATP synthase subunit C BM525_18545 PF00119 ATP synthase A chain BM525_18555 PF02195 ParB-like nuclease domain BM525_18555 PF17762 HTH domain found in ParB protein BM525_18560 PF13614 AAA domain BM525_18565 PF02527 rRNA small subunit methyltransferase G BM525_18570 PF01134 Glucose inhibited division protein A BM525_18570 PF13932 GidA associated domain BM525_18585 PF00258 Flavodoxin BM525_18590 PF12631 MnmE helical domain BM525_18590 PF10396 GTP-binding protein TrmE N-terminus BM525_18590 PF01926 50S ribosome-binding GTPase BM525_18595 PF04461 Protein of unknown function (DUF520) BM525_18600 PF14849 YidC periplasmic domain BM525_18600 PF02096 60Kd inner membrane protein BM525_18605 PF00825 Ribonuclease P BM525_18635 PF01396 Topoisomerase DNA binding C4 zinc finger BM525_18635 PF01751 Toprim domain BM525_18635 PF01131 DNA topoisomerase BM525_18755 PF04546 Sigma-70, non-essential region BM525_18755 PF03979 Sigma-70 factor, region 1.1 BM525_18755 PF00140 Sigma-70 factor, region 1.2 BM525_18755 PF04542 Sigma-70 region 2 BM525_18755 PF04545 Sigma-70, region 4 BM525_18755 PF04539 Sigma-70 region 3 BM525_18820 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BM525_18820 PF00437 Type II/IV secretion system protein BM525_18850 PF00437 Type II/IV secretion system protein BM525_19355 PF05175 Methyltransferase small domain BM525_19355 PF08468 Methyltransferase small domain N-terminal BM525_19380 PF00145 C-5 cytosine-specific DNA methylase BM525_19445 PF01757 Acyltransferase family BM525_19565 PF06750 Bacterial Peptidase A24 N-terminal domain BM525_19565 PF01478 Type IV leader peptidase family BM525_19855 PF02675 S-adenosylmethionine decarboxylase BM525_19935 PF00691 OmpA family BM525_19935 PF05736 OprF membrane domain BM525_19960 PF14493 Helix-turn-helix domain BM525_19960 PF05970 PIF1-like helicase BM525_19970 PF00712 DNA polymerase III beta subunit, N-terminal domain BM525_19970 PF02767 DNA polymerase III beta subunit, central domain BM525_19970 PF02768 DNA polymerase III beta subunit, C-terminal domain BM525_20015 PF11412 Disulphide bond corrector protein DsbC BM525_20015 PF02683 Cytochrome C biogenesis protein transmembrane region BM525_20050 PF01555 DNA methylase BM525_20065 PF00303 Thymidylate synthase BM525_20095 PF04545 Sigma-70, region 4 BM525_20095 PF04542 Sigma-70 region 2 BM525_20115 PF00266 Aminotransferase class-V BM525_20120 PF02223 Thymidylate kinase BM525_20145 PF02599 Global regulator protein family BM525_20180 PF00317 Ribonucleotide reductase, all-alpha domain BM525_20180 PF02867 Ribonucleotide reductase, barrel domain BM525_20180 PF03477 ATP cone domain BM525_20185 PF00268 Ribonucleotide reductase, small chain BM525_20190 PF00268 Ribonucleotide reductase, small chain BM525_20245 PF11867 Domain of unknown function (DUF3387) BM525_20245 PF18766 SWI2/SNF2 ATPase BM525_20245 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BM525_20260 PF12161 HsdM N-terminal domain BM525_20260 PF02384 N-6 DNA Methylase BM525_20285 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BM525_20295 PF14490 Helix-hairpin-helix containing domain BM525_20295 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BM525_20295 PF13538 UvrD-like helicase C-terminal domain BM525_20315 PF02899 Phage integrase, N-terminal SAM-like domain BM525_20315 PF00589 Phage integrase family BM525_20320 PF00140 Sigma-70 factor, region 1.2 BM525_20320 PF03979 Sigma-70 factor, region 1.1 BM525_20320 PF04539 Sigma-70 region 3 BM525_20320 PF04545 Sigma-70, region 4 BM525_20320 PF04542 Sigma-70 region 2 BM525_20335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM525_20335 PF02811 PHP domain BM525_20335 PF14579 Helix-hairpin-helix motif BM525_20335 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM525_20365 PF17151 Periplasmic sensor domain BM525_20365 PF00990 Diguanylate cyclase, GGDEF domain BM525_20385 PF07282 Putative transposase DNA-binding domain BM525_20385 PF01385 Probable transposase BM525_20385 PF12323 Helix-turn-helix domain BM525_20390 PF00580 UvrD/REP helicase N-terminal domain BM525_20390 PF13361 UvrD-like helicase C-terminal domain BM525_20410 PF00436 Single-strand binding protein family BM525_20440 PF00216 Bacterial DNA-binding protein BM525_20675 PF10544 T5orf172 domain BM525_20695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM525_20740 PF01653 NAD-dependent DNA ligase adenylation domain BM525_20740 PF03120 NAD-dependent DNA ligase OB-fold domain BM525_20740 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BM525_20740 PF12826 Helix-hairpin-helix motif BM525_20740 PF00533 BRCA1 C Terminus (BRCT) domain BM525_20780 PF00476 DNA polymerase family A BM525_20780 PF01612 3'-5' exonuclease BM525_20780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BM525_20780 PF01367 5'-3' exonuclease, C-terminal SAM fold BM525_20825 PF01258 Prokaryotic dksA/traR C4-type zinc finger BM525_20850 PF00999 Sodium/hydrogen exchanger family BM525_20850 PF02254 TrkA-N domain BM525_20900 PF12826 Helix-hairpin-helix motif BM525_20900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BM525_20900 PF03120 NAD-dependent DNA ligase OB-fold domain BM525_20900 PF01653 NAD-dependent DNA ligase adenylation domain BM525_20900 PF00533 BRCA1 C Terminus (BRCT) domain BM525_20905 PF00575 S1 RNA binding domain BM525_20905 PF00773 RNB domain BM525_20905 PF08461 Ribonuclease R winged-helix domain BM525_20905 PF17876 Cold shock domain BM525_20905 PF08206 Ribonuclease B OB domain BM525_20935 PF18073 Rubredoxin metal binding domain BM525_20945 PF03989 DNA gyrase C-terminal domain, beta-propeller BM525_20945 PF00521 DNA gyrase/topoisomerase IV, subunit A BM525_20950 PF00986 DNA gyrase B subunit, carboxyl terminus BM525_20950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_20950 PF01751 Toprim domain BM525_20950 PF00204 DNA gyrase B BM525_20965 PF02463 RecF/RecN/SMC N terminal domain BM525_20970 PF00154 recA bacterial DNA recombination protein BM525_21020 PF17284 Spermidine synthase tetramerisation domain BM525_21140 PF00082 Subtilase family BM525_21140 PF04151 Bacterial pre-peptidase C-terminal domain BM525_21215 PF00140 Sigma-70 factor, region 1.2 BM525_21215 PF04545 Sigma-70, region 4 BM525_21215 PF04539 Sigma-70 region 3 BM525_21215 PF04542 Sigma-70 region 2 BM525_21220 PF00563 EAL domain BM525_21220 PF08668 HDOD domain BM525_21225 PF13638 PIN domain BM525_21225 PF02562 PhoH-like protein BM525_21240 PF02350 UDP-N-acetylglucosamine 2-epimerase BM525_21245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BM525_21245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BM525_21245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BM525_21255 PF16363 GDP-mannose 4,6 dehydratase BM525_21260 PF01370 NAD dependent epimerase/dehydratase family BM525_21305 PF10531 SLBB domain BM525_21305 PF02563 Polysaccharide biosynthesis/export protein BM525_21315 PF02954 Bacterial regulatory protein, Fis family BM525_21315 PF00072 Response regulator receiver domain BM525_21315 PF00158 Sigma-54 interaction domain BM525_21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM525_21320 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM525_21320 PF00512 His Kinase A (phospho-acceptor) domain BM525_21330 PF00733 Asparagine synthase BM525_21330 PF13537 Glutamine amidotransferase domain BM525_21340 PF13614 AAA domain BM525_21345 PF02195 ParB-like nuclease domain BM525_21345 PF17762 HTH domain found in ParB protein BM525_21360 PF01380 SIS domain BM525_21365 PF13614 AAA domain BM525_21375 PF02397 Bacterial sugar transferase BM525_21390 PF00535 Glycosyl transferase family 2 BM525_21395 PF13537 Glutamine amidotransferase domain BM525_21395 PF00733 Asparagine synthase BM525_21405 PF14667 Polysaccharide biosynthesis C-terminal domain BM525_21405 PF01943 Polysaccharide biosynthesis protein BM525_21415 PF02689 Helicase BM525_21415 PF05970 PIF1-like helicase BM525_21440 PF08411 Exonuclease C-terminal BM525_21440 PF00929 Exonuclease BM525_21465 PF02086 D12 class N6 adenine-specific DNA methyltransferase BM525_21500 PF00990 Diguanylate cyclase, GGDEF domain BM525_21525 PF13538 UvrD-like helicase C-terminal domain BM525_21525 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BM525_21525 PF14490 Helix-hairpin-helix containing domain BM525_21560 PF10502 Signal peptidase, peptidase S26 BM525_21600 PF01323 DSBA-like thioredoxin domain BM525_21635 PF00580 UvrD/REP helicase N-terminal domain BM525_21635 PF13361 UvrD-like helicase C-terminal domain BM525_21655 PF00360 Phytochrome region BM525_21655 PF01590 GAF domain BM525_21655 PF00563 EAL domain BM525_21655 PF00990 Diguanylate cyclase, GGDEF domain BM525_21725 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM525_21725 PF14579 Helix-hairpin-helix motif BM525_21725 PF02811 PHP domain BM525_21725 PF01336 OB-fold nucleic acid binding domain BM525_21725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain