BM525_00005 SM00382 ATPases associated with a variety of cellular activities BM525_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BM525_00010 SM00480 DNA polymerase III beta subunit BM525_00020 SM00387 Histidine kinase-like ATPases BM525_00020 SM00433 TopoisomeraseII BM525_00040 SM00836 DALR anticodon binding domain BM525_00080 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BM525_00080 SM00474 3'-5' exonuclease BM525_00080 SM00475 5'-3' exonuclease BM525_00080 SM00482 DNA polymerase A domain BM525_00115 SM00257 Lysin motif BM525_00200 SM00481 DNA polymerase alpha chain like domain BM525_00290 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BM525_00290 SM01232 BM525_00290 BM525_00320 SM00052 Putative diguanylate phosphodiesterase BM525_00320 SM00267 diguanylate cyclase BM525_00330 SM00829 Enoylreductase BM525_00335 SM00450 Rhodanese Homology Domain BM525_00365 SM00530 Helix-turn-helix XRE-family like proteins BM525_00380 SM00052 Putative diguanylate phosphodiesterase BM525_00380 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_00380 SM00267 diguanylate cyclase BM525_00400 SM00530 Helix-turn-helix XRE-family like proteins BM525_00430 SM00849 Metallo-beta-lactamase superfamily BM525_00455 SM00382 ATPases associated with a variety of cellular activities BM525_00460 SM00382 ATPases associated with a variety of cellular activities BM525_00475 SM00450 Rhodanese Homology Domain BM525_00480 SM00849 Metallo-beta-lactamase superfamily BM525_00545 SM00490 helicase superfamily c-terminal domain BM525_00550 SM00487 DEAD-like helicases superfamily BM525_00565 SM00382 ATPases associated with a variety of cellular activities BM525_00600 SM00849 Metallo-beta-lactamase superfamily BM525_00620 SM00876 Biotin and Thiamin Synthesis associated domain BM525_00670 SM00267 diguanylate cyclase BM525_00680 SM00072 Guanylate kinase homologues. BM525_00685 SM01409 BM525_00685 BM525_00690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM525_00690 SM00954 Region found in RelA / SpoT proteins BM525_00705 SM00487 DEAD-like helicases superfamily BM525_00705 SM00490 helicase superfamily c-terminal domain BM525_00735 SM00382 ATPases associated with a variety of cellular activities BM525_00755 SM00052 Putative diguanylate phosphodiesterase BM525_00755 SM01034 Sensors of blue-light using FAD BM525_00780 SM00271 DnaJ molecular chaperone homology domain BM525_00820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_00840 SM00052 Putative diguanylate phosphodiesterase BM525_00840 SM00267 diguanylate cyclase BM525_00855 SM00341 Helicase and RNase D C-terminal BM525_00855 SM00487 DEAD-like helicases superfamily BM525_00855 SM00490 helicase superfamily c-terminal domain BM525_00855 SM00956 BM525_00855 BM525_00860 SM00924 MgtE intracellular N domain BM525_00870 SM00267 diguanylate cyclase BM525_00870 SM00448 cheY-homologous receiver domain BM525_00880 SM00971 Serine acetyltransferase, N-terminal BM525_00920 SM00014 Acid phosphatase homologues BM525_00960 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM525_01010 SM00354 helix_turn _helix lactose operon repressor BM525_01085 SM00420 helix_turn_helix, Deoxyribose operon repressor BM525_01085 SM01134 BM525_01085 BM525_01125 SM00965 Secretin and TonB N terminus short domain BM525_01135 SM00028 Tetratricopeptide repeats BM525_01140 SM00382 ATPases associated with a variety of cellular activities BM525_01210 SM00316 Ribosomal protein S1-like RNA-binding domain BM525_01240 SM00342 helix_turn_helix, arabinose operon control protein BM525_01245 SM01038 Beta galactosidase small chain BM525_01250 SM00448 cheY-homologous receiver domain BM525_01250 SM00862 Transcriptional regulatory protein, C terminal BM525_01255 SM00387 Histidine kinase-like ATPases BM525_01280 SM00478 endonuclease III BM525_01280 SM00525 BM525_01280 BM525_01320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_01325 SM00448 cheY-homologous receiver domain BM525_01330 SM00073 Histidine Phosphotransfer domain BM525_01330 SM00260 Two component signalling adaptor domain BM525_01330 SM00387 Histidine kinase-like ATPases BM525_01330 SM01231 BM525_01330 BM525_01335 SM00260 Two component signalling adaptor domain BM525_01340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_01340 SM00091 PAS domain BM525_01340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_01345 SM00138 Methyltransferase, chemotaxis proteins BM525_01355 SM00448 cheY-homologous receiver domain BM525_01360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_01365 SM00448 cheY-homologous receiver domain BM525_01370 SM00073 Histidine Phosphotransfer domain BM525_01370 SM00260 Two component signalling adaptor domain BM525_01370 SM00387 Histidine kinase-like ATPases BM525_01370 SM01231 BM525_01370 BM525_01375 SM00260 Two component signalling adaptor domain BM525_01380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_01380 SM00091 PAS domain BM525_01380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_01380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_01385 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_01385 SM00091 PAS domain BM525_01385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_01385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_01390 SM00138 Methyltransferase, chemotaxis proteins BM525_01400 SM00448 cheY-homologous receiver domain BM525_01420 SM00354 helix_turn _helix lactose operon repressor BM525_01435 SM00267 diguanylate cyclase BM525_01450 SM00342 helix_turn_helix, arabinose operon control protein BM525_01450 SM00387 Histidine kinase-like ATPases BM525_01450 SM00388 His Kinase A (phosphoacceptor) domain BM525_01450 SM00448 cheY-homologous receiver domain BM525_01465 SM00354 helix_turn _helix lactose operon repressor BM525_01535 SM00855 Phosphoglycerate mutase family BM525_01550 SM00671 Sel1-like repeats. BM525_01555 SM00382 ATPases associated with a variety of cellular activities BM525_01560 SM01403 BM525_01560 BM525_01580 SM01382 BM525_01580 BM525_01580 SM01383 BM525_01580 BM525_01595 SM00322 K homology RNA-binding domain BM525_01645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_01645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_01670 SM00487 DEAD-like helicases superfamily BM525_01670 SM00490 helicase superfamily c-terminal domain BM525_01700 SM00342 helix_turn_helix, arabinose operon control protein BM525_01710 SM00938 Nitrogen regulatory protein P-II BM525_01730 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BM525_01765 SM00073 Histidine Phosphotransfer domain BM525_01765 SM00387 Histidine kinase-like ATPases BM525_01765 SM00388 His Kinase A (phosphoacceptor) domain BM525_01765 SM00448 cheY-homologous receiver domain BM525_01770 SM00434 DNA Topoisomerase IV BM525_01780 SM00052 Putative diguanylate phosphodiesterase BM525_01780 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_01780 SM00091 PAS domain BM525_01780 SM00267 diguanylate cyclase BM525_01785 SM01150 BM525_01785 BM525_01860 SM00965 Secretin and TonB N terminus short domain BM525_01880 SM00842 Cell division protein FtsA BM525_01890 SM00919 Malic enzyme, NAD binding domain BM525_01890 SM01274 BM525_01890 BM525_01910 SM01060 BM525_01910 BM525_01935 SM00052 Putative diguanylate phosphodiesterase BM525_01965 SM00859 Semialdehyde dehydrogenase, NAD binding domain BM525_01970 SM00851 MGS-like domain BM525_01995 SM00448 cheY-homologous receiver domain BM525_01995 SM00862 Transcriptional regulatory protein, C terminal BM525_02000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_02000 SM00387 Histidine kinase-like ATPases BM525_02000 SM00388 His Kinase A (phosphoacceptor) domain BM525_02035 SM00450 Rhodanese Homology Domain BM525_02075 SM00479 BM525_02075 BM525_02145 SM00267 diguanylate cyclase BM525_02150 SM01004 Delta-aminolevulinic acid dehydratase BM525_02160 SM00487 DEAD-like helicases superfamily BM525_02160 SM00490 helicase superfamily c-terminal domain BM525_02170 SM00357 Cold shock protein domain BM525_02170 SM00382 ATPases associated with a variety of cellular activities BM525_02170 SM00959 Rho termination factor, N-terminal domain BM525_02180 SM00387 Histidine kinase-like ATPases BM525_02180 SM00388 His Kinase A (phosphoacceptor) domain BM525_02180 SM00448 cheY-homologous receiver domain BM525_02190 SM01001 AIR carboxylase BM525_02250 SM00788 Adenylosuccinate synthetase BM525_02300 SM01005 Alanine racemase, C-terminal domain BM525_02325 SM00062 Bacterial periplasmic substrate-binding proteins BM525_02355 SM00670 Large family of predicted nucleotide-binding domains BM525_02365 SM00530 Helix-turn-helix XRE-family like proteins BM525_02490 SM00257 Lysin motif BM525_02530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_02530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_02530 SM01049 BM525_02530 BM525_02545 SM00287 Bacterial SH3 domain homologues BM525_02550 SM01118 BM525_02550 BM525_02560 SM00927 DNA mismatch repair enzyme MutH BM525_02570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_02590 SM00448 cheY-homologous receiver domain BM525_02595 SM00267 diguanylate cyclase BM525_02620 SM00487 DEAD-like helicases superfamily BM525_02620 SM00490 helicase superfamily c-terminal domain BM525_02635 SM00670 Large family of predicted nucleotide-binding domains BM525_02650 SM00487 DEAD-like helicases superfamily BM525_02650 SM00490 helicase superfamily c-terminal domain BM525_02655 SM00028 Tetratricopeptide repeats BM525_02690 SM00387 Histidine kinase-like ATPases BM525_02690 SM00433 TopoisomeraseII BM525_02730 SM00841 Elongation factor P, C-terminal BM525_02730 SM01185 BM525_02730 BM525_02775 SM00014 Acid phosphatase homologues BM525_02785 SM01012 BM525_02785 BM525_02815 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BM525_02830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_02830 SM00091 PAS domain BM525_02830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_02845 SM00382 ATPases associated with a variety of cellular activities BM525_02905 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BM525_02910 SM01007 Class II Aldolase and Adducin N-terminal domain BM525_02940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_02940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_02950 SM00400 zinc finger BM525_02950 SM00493 BM525_02950 BM525_02950 SM00766 DNA primase DnaG DnaB-binding BM525_02975 SM01207 BM525_02975 BM525_02980 SM00905 Dihydroneopterin aldolase BM525_03015 SM00530 Helix-turn-helix XRE-family like proteins BM525_03025 SM00387 Histidine kinase-like ATPases BM525_03030 SM00448 cheY-homologous receiver domain BM525_03030 SM00862 Transcriptional regulatory protein, C terminal BM525_03035 SM00387 Histidine kinase-like ATPases BM525_03035 SM00388 His Kinase A (phosphoacceptor) domain BM525_03045 SM00710 Parallel beta-helix repeats BM525_03080 SM00028 Tetratricopeptide repeats BM525_03085 SM00448 cheY-homologous receiver domain BM525_03085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM525_03090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_03090 SM00091 PAS domain BM525_03090 SM00387 Histidine kinase-like ATPases BM525_03090 SM00388 His Kinase A (phosphoacceptor) domain BM525_03090 SM00448 cheY-homologous receiver domain BM525_03120 SM00028 Tetratricopeptide repeats BM525_03150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_03150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_03165 SM00650 Ribosomal RNA adenine dimethylases BM525_03185 SM00271 DnaJ molecular chaperone homology domain BM525_03230 SM00954 Region found in RelA / SpoT proteins BM525_03300 SM00862 Transcriptional regulatory protein, C terminal BM525_03305 SM00116 Domain in cystathionine beta-synthase and other proteins. BM525_03305 SM00924 MgtE intracellular N domain BM525_03335 SM00382 ATPases associated with a variety of cellular activities BM525_03365 SM00382 ATPases associated with a variety of cellular activities BM525_03400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM525_03405 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM525_03435 SM00052 Putative diguanylate phosphodiesterase BM525_03435 SM00267 diguanylate cyclase BM525_03475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_03475 SM00091 PAS domain BM525_03475 SM00387 Histidine kinase-like ATPases BM525_03475 SM00388 His Kinase A (phosphoacceptor) domain BM525_03475 SM00448 cheY-homologous receiver domain BM525_03500 SM00861 Transketolase, pyrimidine binding domain BM525_03505 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM525_03555 SM00382 ATPases associated with a variety of cellular activities BM525_03590 SM00347 helix_turn_helix multiple antibiotic resistance protein BM525_03600 SM01263 BM525_03600 BM525_03620 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_03620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_03645 SM00642 Alpha-amylase domain BM525_03690 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM525_03690 SM00866 BM525_03690 BM525_03725 SM00382 ATPases associated with a variety of cellular activities BM525_03785 SM00320 WD40 repeats BM525_03830 SM00487 DEAD-like helicases superfamily BM525_03875 SM00850 LytTr DNA-binding domain BM525_03890 SM00448 cheY-homologous receiver domain BM525_03895 SM00091 PAS domain BM525_03915 SM00729 Elongator protein 3, MiaB family, Radical SAM BM525_03925 SM00487 DEAD-like helicases superfamily BM525_03925 SM00490 helicase superfamily c-terminal domain BM525_03935 SM00382 ATPases associated with a variety of cellular activities BM525_03945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM525_03960 SM01329 BM525_03960 BM525_03965 SM00917 LeuA allosteric (dimerisation) domain BM525_03980 SM01192 BM525_03980 BM525_03980 SM01193 BM525_03980 BM525_03990 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BM525_03990 SM00534 ATPase domain of DNA mismatch repair MUTS family BM525_04000 SM00382 ATPases associated with a variety of cellular activities BM525_04005 SM00382 ATPases associated with a variety of cellular activities BM525_04015 SM00387 Histidine kinase-like ATPases BM525_04015 SM00388 His Kinase A (phosphoacceptor) domain BM525_04020 SM00448 cheY-homologous receiver domain BM525_04020 SM00862 Transcriptional regulatory protein, C terminal BM525_04050 SM00382 ATPases associated with a variety of cellular activities BM525_04120 SM00382 ATPases associated with a variety of cellular activities BM525_04160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BM525_04165 SM01329 BM525_04165 BM525_04185 SM00267 diguanylate cyclase BM525_04245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM525_04290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM525_04300 SM00935 Outer membrane protein (OmpH-like) BM525_04325 SM00481 DNA polymerase alpha chain like domain BM525_04335 SM00977 TilS substrate C-terminal domain BM525_04340 SM00267 diguanylate cyclase BM525_04360 SM00062 Bacterial periplasmic substrate-binding proteins BM525_04365 SM01211 BM525_04365 BM525_04395 SM00382 ATPases associated with a variety of cellular activities BM525_04405 SM00421 helix_turn_helix, Lux Regulon BM525_04410 SM00052 Putative diguanylate phosphodiesterase BM525_04440 SM00858 BM525_04440 BM525_04445 SM00260 Two component signalling adaptor domain BM525_04445 SM00448 cheY-homologous receiver domain BM525_04450 SM00138 Methyltransferase, chemotaxis proteins BM525_04495 SM00047 Lysozyme subfamily 2 BM525_04610 SM00116 Domain in cystathionine beta-synthase and other proteins. BM525_04630 SM00822 BM525_04630 BM525_04650 SM00858 BM525_04650 BM525_04685 SM00382 ATPases associated with a variety of cellular activities BM525_04690 SM00387 Histidine kinase-like ATPases BM525_04690 SM00388 His Kinase A (phosphoacceptor) domain BM525_04695 SM00382 ATPases associated with a variety of cellular activities BM525_04695 SM00448 cheY-homologous receiver domain BM525_04720 SM00382 ATPases associated with a variety of cellular activities BM525_04780 SM00382 ATPases associated with a variety of cellular activities BM525_04780 SM00962 SRP54-type protein, GTPase domain BM525_04795 SM00448 cheY-homologous receiver domain BM525_04805 SM00073 Histidine Phosphotransfer domain BM525_04805 SM00260 Two component signalling adaptor domain BM525_04805 SM00387 Histidine kinase-like ATPases BM525_04805 SM01231 BM525_04805 BM525_04810 SM00448 cheY-homologous receiver domain BM525_04820 SM00260 Two component signalling adaptor domain BM525_04825 SM00260 Two component signalling adaptor domain BM525_04845 SM01018 B12 binding domain BM525_04860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_04860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_04875 SM00947 Carbonic anhydrase BM525_04910 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BM525_04950 SM00382 ATPases associated with a variety of cellular activities BM525_04955 SM00382 ATPases associated with a variety of cellular activities BM525_04975 SM00382 ATPases associated with a variety of cellular activities BM525_05000 SM00091 PAS domain BM525_05000 SM00382 ATPases associated with a variety of cellular activities BM525_05015 SM00344 helix_turn_helix ASNC type BM525_05020 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM525_05050 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM525_05065 SM00028 Tetratricopeptide repeats BM525_05100 SM00028 Tetratricopeptide repeats BM525_05180 SM00829 Enoylreductase BM525_05185 SM00267 diguanylate cyclase BM525_05195 SM00836 DALR anticodon binding domain BM525_05195 SM01016 Arginyl tRNA synthetase N terminal dom BM525_05255 SM00937 BM525_05255 BM525_05300 SM00463 Small MutS-related domain BM525_05330 SM00763 PrkA AAA domain BM525_05360 SM00965 Secretin and TonB N terminus short domain BM525_05375 SM00479 BM525_05375 BM525_05395 SM00357 Cold shock protein domain BM525_05410 SM00478 endonuclease III BM525_05420 SM00900 BM525_05420 BM525_05460 SM00487 DEAD-like helicases superfamily BM525_05460 SM00490 helicase superfamily c-terminal domain BM525_05540 SM00267 diguanylate cyclase BM525_05565 SM00028 Tetratricopeptide repeats BM525_05570 SM00327 von Willebrand factor (vWF) type A domain BM525_05605 SM00052 Putative diguanylate phosphodiesterase BM525_05605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_05605 SM00091 PAS domain BM525_05605 SM00267 diguanylate cyclase BM525_05615 SM00855 Phosphoglycerate mutase family BM525_05625 SM01091 Transporter associated domain BM525_05635 SM00382 ATPases associated with a variety of cellular activities BM525_05635 SM00962 SRP54-type protein, GTPase domain BM525_05635 SM00963 SRP54-type protein, helical bundle domain BM525_05685 SM00382 ATPases associated with a variety of cellular activities BM525_05735 SM00830 Chorismate mutase type II BM525_05740 SM00830 Chorismate mutase type II BM525_05745 SM00448 cheY-homologous receiver domain BM525_05760 SM00331 Sigma factor PP2C-like phosphatases BM525_05760 SM00448 cheY-homologous receiver domain BM525_05770 SM00052 Putative diguanylate phosphodiesterase BM525_05770 SM00267 diguanylate cyclase BM525_05780 SM00387 Histidine kinase-like ATPases BM525_05780 SM00388 His Kinase A (phosphoacceptor) domain BM525_05790 SM00382 ATPases associated with a variety of cellular activities BM525_05790 SM00448 cheY-homologous receiver domain BM525_05800 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_05825 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BM525_05830 SM00382 ATPases associated with a variety of cellular activities BM525_05915 SM00859 Semialdehyde dehydrogenase, NAD binding domain BM525_05930 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM525_05940 SM00267 diguanylate cyclase BM525_05960 SM00829 Enoylreductase BM525_06005 SM00267 diguanylate cyclase BM525_06040 SM00342 helix_turn_helix, arabinose operon control protein BM525_06085 SM00729 Elongator protein 3, MiaB family, Radical SAM BM525_06085 SM00876 Biotin and Thiamin Synthesis associated domain BM525_06110 SM00226 Low molecular weight phosphatase family BM525_06120 SM00382 ATPases associated with a variety of cellular activities BM525_06140 SM00382 ATPases associated with a variety of cellular activities BM525_06145 SM00729 Elongator protein 3, MiaB family, Radical SAM BM525_06155 SM00028 Tetratricopeptide repeats BM525_06155 SM00448 cheY-homologous receiver domain BM525_06210 SM01321 BM525_06210 BM525_06225 SM00382 ATPases associated with a variety of cellular activities BM525_06240 SM00905 Dihydroneopterin aldolase BM525_06250 SM00387 Histidine kinase-like ATPases BM525_06255 SM00448 cheY-homologous receiver domain BM525_06255 SM00862 Transcriptional regulatory protein, C terminal BM525_06325 SM00363 S4 RNA-binding domain BM525_06335 SM01266 BM525_06335 BM525_06350 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BM525_06360 SM00382 ATPases associated with a variety of cellular activities BM525_06425 SM00421 helix_turn_helix, Lux Regulon BM525_06425 SM00448 cheY-homologous receiver domain BM525_06430 SM00387 Histidine kinase-like ATPases BM525_06430 SM00388 His Kinase A (phosphoacceptor) domain BM525_06435 SM00671 Sel1-like repeats. BM525_06460 SM00271 DnaJ molecular chaperone homology domain BM525_06470 SM00052 Putative diguanylate phosphodiesterase BM525_06470 SM00091 PAS domain BM525_06470 SM00267 diguanylate cyclase BM525_06490 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BM525_06495 SM00851 MGS-like domain BM525_06495 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BM525_06545 SM00116 Domain in cystathionine beta-synthase and other proteins. BM525_06545 SM01091 Transporter associated domain BM525_06560 SM00729 Elongator protein 3, MiaB family, Radical SAM BM525_06600 SM00903 Flavin reductase like domain BM525_06665 SM00829 Enoylreductase BM525_06680 SM01400 BM525_06680 BM525_06705 SM00937 BM525_06705 BM525_06755 SM00838 Elongation factor G C-terminus BM525_06755 SM00889 Elongation factor G, domain IV BM525_06760 SM01116 BM525_06760 BM525_06765 SM00219 Tyrosine kinase, catalytic domain BM525_06765 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BM525_06775 SM00460 Transglutaminase/protease-like homologues BM525_06805 SM00052 Putative diguanylate phosphodiesterase BM525_06805 SM00267 diguanylate cyclase BM525_06875 SM00347 helix_turn_helix multiple antibiotic resistance protein BM525_06890 SM00864 Tubulin/FtsZ family, GTPase domain BM525_06890 SM00865 Tubulin/FtsZ family, C-terminal domain BM525_06900 SM00052 Putative diguanylate phosphodiesterase BM525_06900 SM00091 PAS domain BM525_06900 SM00267 diguanylate cyclase BM525_06905 SM00052 Putative diguanylate phosphodiesterase BM525_06905 SM00267 diguanylate cyclase BM525_06935 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM525_06950 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_06950 SM00091 PAS domain BM525_06950 SM00267 diguanylate cyclase BM525_06980 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM525_06985 SM01092 CO dehydrogenase flavoprotein C-terminal domain BM525_07025 SM00052 Putative diguanylate phosphodiesterase BM525_07025 SM00091 PAS domain BM525_07025 SM00267 diguanylate cyclase BM525_07025 SM00448 cheY-homologous receiver domain BM525_07030 SM00267 diguanylate cyclase BM525_07030 SM00448 cheY-homologous receiver domain BM525_07035 SM00387 Histidine kinase-like ATPases BM525_07035 SM00388 His Kinase A (phosphoacceptor) domain BM525_07035 SM00448 cheY-homologous receiver domain BM525_07115 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BM525_07185 SM00052 Putative diguanylate phosphodiesterase BM525_07185 SM00267 diguanylate cyclase BM525_07245 SM00710 Parallel beta-helix repeats BM525_07280 SM00873 B3/4 domain BM525_07280 SM00874 tRNA synthetase B5 domain BM525_07280 SM00896 Ferredoxin-fold anticodon binding domain BM525_07285 SM00411 bacterial (prokaryotic) histone like domain BM525_07320 SM00487 DEAD-like helicases superfamily BM525_07320 SM00490 helicase superfamily c-terminal domain BM525_07320 SM00982 BM525_07320 BM525_07320 SM01058 CarD-like/TRCF domain BM525_07340 SM00387 Histidine kinase-like ATPases BM525_07345 SM00897 FIST N domain BM525_07345 SM01204 BM525_07345 BM525_07425 SM00878 Biotin carboxylase C-terminal domain BM525_07445 SM00422 helix_turn_helix, mercury resistance BM525_07465 SM00062 Bacterial periplasmic substrate-binding proteins BM525_07465 SM00267 diguanylate cyclase BM525_07480 SM00387 Histidine kinase-like ATPases BM525_07480 SM00388 His Kinase A (phosphoacceptor) domain BM525_07480 SM00448 cheY-homologous receiver domain BM525_07490 SM00116 Domain in cystathionine beta-synthase and other proteins. BM525_07510 SM00267 diguanylate cyclase BM525_07515 SM00342 helix_turn_helix, arabinose operon control protein BM525_07525 SM00382 ATPases associated with a variety of cellular activities BM525_07525 SM00487 DEAD-like helicases superfamily BM525_07525 SM00490 helicase superfamily c-terminal domain BM525_07525 SM00847 Helicase associated domain (HA2) Add an annotation BM525_07540 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BM525_07545 SM00829 Enoylreductase BM525_07555 SM00479 BM525_07555 BM525_07575 SM00052 Putative diguanylate phosphodiesterase BM525_07580 SM00382 ATPases associated with a variety of cellular activities BM525_07595 SM00634 Bacterial Ig-like domain (group 1) BM525_07610 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BM525_07610 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BM525_07610 SM00493 BM525_07610 BM525_07670 SM00587 ZnF_C4 abd HLH domain containing kinases domain BM525_07675 SM00316 Ribosomal protein S1-like RNA-binding domain BM525_07680 SM00363 S4 RNA-binding domain BM525_07715 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BM525_07720 SM00822 BM525_07720 BM525_07730 SM00825 Beta-ketoacyl synthase BM525_07750 SM00382 ATPases associated with a variety of cellular activities BM525_07770 SM00267 diguanylate cyclase BM525_07895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_07895 SM00091 PAS domain BM525_07895 SM00387 Histidine kinase-like ATPases BM525_07895 SM00388 His Kinase A (phosphoacceptor) domain BM525_07895 SM00448 cheY-homologous receiver domain BM525_07900 SM00448 cheY-homologous receiver domain BM525_07900 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM525_07910 SM00316 Ribosomal protein S1-like RNA-binding domain BM525_07935 SM01387 BM525_07935 BM525_07940 SM00091 PAS domain BM525_07940 SM00267 diguanylate cyclase BM525_07945 SM00363 S4 RNA-binding domain BM525_07960 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM525_07965 SM00448 cheY-homologous receiver domain BM525_08030 SM00729 Elongator protein 3, MiaB family, Radical SAM BM525_08070 SM00382 ATPases associated with a variety of cellular activities BM525_08095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_08095 SM00267 diguanylate cyclase BM525_08135 SM00382 ATPases associated with a variety of cellular activities BM525_08165 SM00342 helix_turn_helix, arabinose operon control protein BM525_08180 SM00857 Resolvase, N terminal domain BM525_08235 SM00347 helix_turn_helix multiple antibiotic resistance protein BM525_08250 SM00028 Tetratricopeptide repeats BM525_08275 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM525_08300 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BM525_08305 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BM525_08335 SM00357 Cold shock protein domain BM525_08345 SM00382 ATPases associated with a variety of cellular activities BM525_08345 SM01086 C-terminal, D2-small domain, of ClpB protein BM525_08350 SM00316 Ribosomal protein S1-like RNA-binding domain BM525_08375 SM00731 SprT homologues. BM525_08405 SM00870 BM525_08405 BM525_08410 SM00729 Elongator protein 3, MiaB family, Radical SAM BM525_08425 SM00936 Penicillin-binding protein 5, C-terminal domain BM525_08490 SM00267 diguanylate cyclase BM525_08500 SM01103 BM525_08500 BM525_08510 SM00382 ATPases associated with a variety of cellular activities BM525_08540 SM00052 Putative diguanylate phosphodiesterase BM525_08540 SM00267 diguanylate cyclase BM525_08540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_08555 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM525_08560 SM00046 Diacylglycerol kinase catalytic domain (presumed) BM525_08560 SM00195 Dual specificity phosphatase, catalytic domain BM525_08560 SM00404 Protein tyrosine phosphatase, catalytic domain motif BM525_08610 SM00507 HNH nucleases BM525_08615 SM00316 Ribosomal protein S1-like RNA-binding domain BM525_08615 SM00322 K homology RNA-binding domain BM525_08670 SM01321 BM525_08670 BM525_08780 SM00028 Tetratricopeptide repeats BM525_08800 SM00771 ZipA, C-terminal domain (FtsZ-binding) BM525_08805 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BM525_08805 SM00292 breast cancer carboxy-terminal domain BM525_08805 SM00532 Ligase N family BM525_08815 SM00849 Metallo-beta-lactamase superfamily BM525_08820 SM00382 ATPases associated with a variety of cellular activities BM525_08845 SM00729 Elongator protein 3, MiaB family, Radical SAM BM525_08910 SM00861 Transketolase, pyrimidine binding domain BM525_08925 SM00881 CoA binding domain BM525_08980 SM00642 Alpha-amylase domain BM525_08985 SM00642 Alpha-amylase domain BM525_08995 SM00642 Alpha-amylase domain BM525_09000 SM00354 helix_turn _helix lactose operon repressor BM525_09115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM525_09130 SM00387 Histidine kinase-like ATPases BM525_09135 SM00448 cheY-homologous receiver domain BM525_09135 SM00850 LytTr DNA-binding domain BM525_09150 SM00422 helix_turn_helix, mercury resistance BM525_09200 SM00028 Tetratricopeptide repeats BM525_09200 SM00448 cheY-homologous receiver domain BM525_09210 SM00450 Rhodanese Homology Domain BM525_09215 SM00054 EF-hand, calcium binding motif BM525_09220 SM00487 DEAD-like helicases superfamily BM525_09220 SM00490 helicase superfamily c-terminal domain BM525_09225 SM00882 Coenzyme A transferase BM525_09230 SM00882 Coenzyme A transferase BM525_09245 SM00387 Histidine kinase-like ATPases BM525_09290 SM00861 Transketolase, pyrimidine binding domain BM525_09305 SM00220 Serine/Threonine protein kinases, catalytic domain BM525_09340 SM00945 ProQ/FINO family BM525_09345 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM525_09345 SM00245 tail specific protease BM525_09400 SM00981 BM525_09400 BM525_09410 SM00382 ATPases associated with a variety of cellular activities BM525_09600 SM00100 Cyclic nucleotide-monophosphate binding domain BM525_09600 SM00419 helix_turn_helix, cAMP Regulatory protein BM525_09625 SM00047 Lysozyme subfamily 2 BM525_09645 SM00450 Rhodanese Homology Domain BM525_09655 SM01144 BM525_09655 BM525_09715 SM00382 ATPases associated with a variety of cellular activities BM525_09725 SM00843 BM525_09725 BM525_09730 SM00344 helix_turn_helix ASNC type BM525_09735 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BM525_09735 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BM525_09740 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BM525_09745 SM00028 Tetratricopeptide repeats BM525_09760 SM00411 bacterial (prokaryotic) histone like domain BM525_09765 SM00316 Ribosomal protein S1-like RNA-binding domain BM525_09785 SM00434 DNA Topoisomerase IV BM525_09820 SM00052 Putative diguanylate phosphodiesterase BM525_09820 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_09820 SM00267 diguanylate cyclase BM525_09840 SM01130 BM525_09840 BM525_09920 SM00421 helix_turn_helix, Lux Regulon BM525_09920 SM00448 cheY-homologous receiver domain BM525_09950 SM00642 Alpha-amylase domain BM525_09960 SM00852 Probable molybdopterin binding domain BM525_09980 SM00382 ATPases associated with a variety of cellular activities BM525_10210 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BM525_10220 SM00563 Phosphate acyltransferases BM525_10265 SM00342 helix_turn_helix, arabinose operon control protein BM525_10300 SM00893 Electron transfer flavoprotein domain BM525_10305 SM00893 Electron transfer flavoprotein domain BM525_10315 SM00528 Domain in histone-like proteins of HNS family BM525_10335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_10335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_10350 SM00797 Allophanate hydrolase subunit 2 BM525_10355 SM00796 Allophanate hydrolase subunit 1 BM525_10405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM525_10410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM525_10440 SM00267 diguanylate cyclase BM525_10445 SM00642 Alpha-amylase domain BM525_10455 SM00829 Enoylreductase BM525_10470 SM00855 Phosphoglycerate mutase family BM525_10495 SM00729 Elongator protein 3, MiaB family, Radical SAM BM525_10500 SM00382 ATPases associated with a variety of cellular activities BM525_10530 SM00852 Probable molybdopterin binding domain BM525_10650 SM00052 Putative diguanylate phosphodiesterase BM525_10650 SM00267 diguanylate cyclase BM525_10655 SM00849 Metallo-beta-lactamase superfamily BM525_10685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BM525_10690 SM00450 Rhodanese Homology Domain BM525_10705 SM00382 ATPases associated with a variety of cellular activities BM525_10705 SM00448 cheY-homologous receiver domain BM525_10715 SM00387 Histidine kinase-like ATPases BM525_10715 SM00388 His Kinase A (phosphoacceptor) domain BM525_10720 SM00448 cheY-homologous receiver domain BM525_10725 SM00387 Histidine kinase-like ATPases BM525_10725 SM00388 His Kinase A (phosphoacceptor) domain BM525_10725 SM00448 cheY-homologous receiver domain BM525_10795 SM00631 BM525_10795 BM525_10800 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM525_10815 SM01350 BM525_10815 BM525_10820 SM00642 Alpha-amylase domain BM525_10825 SM00642 Alpha-amylase domain BM525_10835 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM525_10895 SM00749 bacterial OsmY and nodulation domain BM525_10970 SM00354 helix_turn _helix lactose operon repressor BM525_10975 SM00858 BM525_10975 BM525_11015 SM00710 Parallel beta-helix repeats BM525_11020 SM00387 Histidine kinase-like ATPases BM525_11020 SM00388 His Kinase A (phosphoacceptor) domain BM525_11020 SM00448 cheY-homologous receiver domain BM525_11040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_11040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_11065 SM00052 Putative diguanylate phosphodiesterase BM525_11065 SM00267 diguanylate cyclase BM525_11075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM525_11080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_11080 SM00387 Histidine kinase-like ATPases BM525_11125 SM00849 Metallo-beta-lactamase superfamily BM525_11130 SM00257 Lysin motif BM525_11150 SM00840 BM525_11150 BM525_11170 SM00244 prohibitin homologues BM525_11180 SM00642 Alpha-amylase domain BM525_11190 SM00829 Enoylreductase BM525_11205 SM01060 BM525_11205 BM525_11210 SM00829 Enoylreductase BM525_11225 SM00539 Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins. BM525_11285 SM00859 Semialdehyde dehydrogenase, NAD binding domain BM525_11295 SM01007 Class II Aldolase and Adducin N-terminal domain BM525_11300 SM00100 Cyclic nucleotide-monophosphate binding domain BM525_11300 SM00419 helix_turn_helix, cAMP Regulatory protein BM525_11330 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM525_11355 SM00825 Beta-ketoacyl synthase BM525_11405 SM00422 helix_turn_helix, mercury resistance BM525_11410 SM00829 Enoylreductase BM525_11435 SM00382 ATPases associated with a variety of cellular activities BM525_11445 SM00387 Histidine kinase-like ATPases BM525_11445 SM00388 His Kinase A (phosphoacceptor) domain BM525_11445 SM00448 cheY-homologous receiver domain BM525_11560 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM525_11605 SM00341 Helicase and RNase D C-terminal BM525_11605 SM00474 3'-5' exonuclease BM525_11635 SM00487 DEAD-like helicases superfamily BM525_11635 SM00488 BM525_11635 BM525_11635 SM00491 BM525_11635 BM525_11645 SM00014 Acid phosphatase homologues BM525_11660 SM00642 Alpha-amylase domain BM525_11685 SM00849 Metallo-beta-lactamase superfamily BM525_11745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_11745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_11780 SM00387 Histidine kinase-like ATPases BM525_11785 SM00493 BM525_11785 BM525_11795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_11795 SM00448 cheY-homologous receiver domain BM525_11795 SM00911 HWE histidine kinase BM525_11820 SM00487 DEAD-like helicases superfamily BM525_11885 SM00382 ATPases associated with a variety of cellular activities BM525_11910 SM00862 Transcriptional regulatory protein, C terminal BM525_11920 SM00091 PAS domain BM525_11920 SM00267 diguanylate cyclase BM525_11965 SM00028 Tetratricopeptide repeats BM525_11975 SM00382 ATPases associated with a variety of cellular activities BM525_11975 SM01086 C-terminal, D2-small domain, of ClpB protein BM525_11985 SM00363 S4 RNA-binding domain BM525_12055 SM00861 Transketolase, pyrimidine binding domain BM525_12110 SM00382 ATPases associated with a variety of cellular activities BM525_12120 SM00382 ATPases associated with a variety of cellular activities BM525_12155 SM00358 Double-stranded RNA binding motif BM525_12155 SM00535 Ribonuclease III family BM525_12165 SM00838 Elongation factor G C-terminus BM525_12220 SM00938 Nitrogen regulatory protein P-II BM525_12305 SM00904 Riboflavin kinase BM525_12355 SM00563 Phosphate acyltransferases BM525_12370 SM00411 bacterial (prokaryotic) histone like domain BM525_12375 SM00382 ATPases associated with a variety of cellular activities BM525_12375 SM00464 Found in ATP-dependent protease La (LON) BM525_12380 SM00382 ATPases associated with a variety of cellular activities BM525_12380 SM00994 ClpX C4-type zinc finger BM525_12380 SM01086 C-terminal, D2-small domain, of ClpB protein BM525_12470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_12480 SM00116 Domain in cystathionine beta-synthase and other proteins. BM525_12480 SM01240 BM525_12480 BM525_12500 SM00382 ATPases associated with a variety of cellular activities BM525_12505 SM00564 beta-propeller repeat BM525_12510 SM00028 Tetratricopeptide repeats BM525_12530 SM00028 Tetratricopeptide repeats BM525_12530 SM00257 Lysin motif BM525_12540 SM00562 BM525_12540 BM525_12570 SM00382 ATPases associated with a variety of cellular activities BM525_12615 SM00850 LytTr DNA-binding domain BM525_12630 SM01323 BM525_12630 BM525_12695 SM00382 ATPases associated with a variety of cellular activities BM525_12715 SM00098 Alkaline phosphatase homologues BM525_12720 SM00260 Two component signalling adaptor domain BM525_12720 SM00448 cheY-homologous receiver domain BM525_12775 SM00028 Tetratricopeptide repeats BM525_12925 SM00382 ATPases associated with a variety of cellular activities BM525_12990 SM00052 Putative diguanylate phosphodiesterase BM525_12990 SM00267 diguanylate cyclase BM525_13005 SM00354 helix_turn _helix lactose operon repressor BM525_13045 SM00967 RNA 2'-O ribose methyltransferase substrate binding BM525_13090 SM00422 helix_turn_helix, mercury resistance BM525_13140 SM00448 cheY-homologous receiver domain BM525_13140 SM00862 Transcriptional regulatory protein, C terminal BM525_13145 SM00387 Histidine kinase-like ATPases BM525_13145 SM00388 His Kinase A (phosphoacceptor) domain BM525_13195 SM01092 CO dehydrogenase flavoprotein C-terminal domain BM525_13200 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM525_13250 SM01322 BM525_13250 BM525_13295 SM01321 BM525_13295 BM525_13300 SM00487 DEAD-like helicases superfamily BM525_13300 SM00490 helicase superfamily c-terminal domain BM525_13320 SM00028 Tetratricopeptide repeats BM525_13320 SM00387 Histidine kinase-like ATPases BM525_13320 SM00388 His Kinase A (phosphoacceptor) domain BM525_13320 SM00448 cheY-homologous receiver domain BM525_13325 SM00267 diguanylate cyclase BM525_13340 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_13340 SM00387 Histidine kinase-like ATPases BM525_13340 SM00388 His Kinase A (phosphoacceptor) domain BM525_13340 SM00448 cheY-homologous receiver domain BM525_13455 SM01011 Aminopeptidase P, N-terminal domain BM525_13480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_13480 SM00387 Histidine kinase-like ATPases BM525_13480 SM00388 His Kinase A (phosphoacceptor) domain BM525_13480 SM00448 cheY-homologous receiver domain BM525_13565 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM525_13565 SM00895 BM525_13565 BM525_13575 SM00644 BM525_13575 BM525_13630 SM00957 SecA DEAD-like domain BM525_13630 SM00958 SecA preprotein cross-linking domain BM525_13645 SM00864 Tubulin/FtsZ family, GTPase domain BM525_13645 SM00865 Tubulin/FtsZ family, C-terminal domain BM525_13650 SM00842 Cell division protein FtsA BM525_13775 SM00028 Tetratricopeptide repeats BM525_13775 SM00267 diguanylate cyclase BM525_13785 SM00382 ATPases associated with a variety of cellular activities BM525_13785 SM00448 cheY-homologous receiver domain BM525_13790 SM00387 Histidine kinase-like ATPases BM525_13810 SM00710 Parallel beta-helix repeats BM525_13850 SM00732 Likely ribonuclease with RNase H fold. BM525_13860 SM00382 ATPases associated with a variety of cellular activities BM525_13950 SM00360 RNA recognition motif BM525_13975 SM00986 Uracil DNA glycosylase superfamily BM525_13975 SM00987 UreE urease accessory protein, C-terminal domain BM525_14005 SM00829 Enoylreductase BM525_14015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BM525_14020 SM00226 Low molecular weight phosphatase family BM525_14035 SM00448 cheY-homologous receiver domain BM525_14045 SM00448 cheY-homologous receiver domain BM525_14045 SM00862 Transcriptional regulatory protein, C terminal BM525_14050 SM00387 Histidine kinase-like ATPases BM525_14050 SM00388 His Kinase A (phosphoacceptor) domain BM525_14085 SM00342 helix_turn_helix, arabinose operon control protein BM525_14135 SM00749 bacterial OsmY and nodulation domain BM525_14160 SM00421 helix_turn_helix, Lux Regulon BM525_14160 SM00448 cheY-homologous receiver domain BM525_14180 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM525_14180 SM00895 BM525_14180 BM525_14205 SM00267 diguanylate cyclase BM525_14205 SM00448 cheY-homologous receiver domain BM525_14225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_14225 SM00091 PAS domain BM525_14225 SM00387 Histidine kinase-like ATPases BM525_14225 SM00388 His Kinase A (phosphoacceptor) domain BM525_14225 SM00448 cheY-homologous receiver domain BM525_14230 SM00287 Bacterial SH3 domain homologues BM525_14230 SM00644 BM525_14230 BM525_14275 SM00450 Rhodanese Homology Domain BM525_14430 SM00448 cheY-homologous receiver domain BM525_14440 SM01230 BM525_14440 BM525_14450 SM00091 PAS domain BM525_14450 SM00387 Histidine kinase-like ATPases BM525_14450 SM00388 His Kinase A (phosphoacceptor) domain BM525_14455 SM00382 ATPases associated with a variety of cellular activities BM525_14455 SM00448 cheY-homologous receiver domain BM525_14460 SM00073 Histidine Phosphotransfer domain BM525_14465 SM00563 Phosphate acyltransferases BM525_14480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_14480 SM00091 PAS domain BM525_14480 SM00267 diguanylate cyclase BM525_14490 SM00244 prohibitin homologues BM525_14500 SM00387 Histidine kinase-like ATPases BM525_14500 SM00388 His Kinase A (phosphoacceptor) domain BM525_14500 SM00448 cheY-homologous receiver domain BM525_14500 SM01358 BM525_14500 BM525_14580 SM01321 BM525_14580 BM525_14590 SM00831 Cation transporter/ATPase, N-terminus BM525_14595 SM00419 helix_turn_helix, cAMP Regulatory protein BM525_14600 SM01068 Putative carbohydrate binding domain BM525_14610 SM00267 diguanylate cyclase BM525_14645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM525_14645 SM00091 PAS domain BM525_14645 SM00387 Histidine kinase-like ATPases BM525_14645 SM00388 His Kinase A (phosphoacceptor) domain BM525_14645 SM00448 cheY-homologous receiver domain BM525_14655 SM00886 Stress responsive A/B Barrel Domain BM525_14665 SM00382 ATPases associated with a variety of cellular activities BM525_14730 SM00849 Metallo-beta-lactamase superfamily BM525_14730 SM01027 Beta-Casp domain BM525_14745 SM00996 S-adenosyl-L-homocysteine hydrolase BM525_14745 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BM525_14750 SM00267 diguanylate cyclase BM525_14770 SM00382 ATPases associated with a variety of cellular activities BM525_14805 SM00564 beta-propeller repeat BM525_14810 SM00062 Bacterial periplasmic substrate-binding proteins BM525_14825 SM00382 ATPases associated with a variety of cellular activities BM525_14855 SM00729 Elongator protein 3, MiaB family, Radical SAM BM525_14880 SM00421 helix_turn_helix, Lux Regulon BM525_14880 SM00448 cheY-homologous receiver domain BM525_14885 SM00091 PAS domain BM525_14885 SM00387 Histidine kinase-like ATPases BM525_14885 SM00388 His Kinase A (phosphoacceptor) domain BM525_14885 SM00448 cheY-homologous receiver domain BM525_14890 SM00897 FIST N domain BM525_14890 SM01204 BM525_14890 BM525_14895 SM00900 BM525_14895 BM525_14905 SM00421 helix_turn_helix, Lux Regulon BM525_14905 SM00448 cheY-homologous receiver domain BM525_14950 SM00421 helix_turn_helix, Lux Regulon BM525_14980 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BM525_14985 SM00421 helix_turn_helix, Lux Regulon BM525_14985 SM00448 cheY-homologous receiver domain BM525_14995 SM00822 BM525_14995 BM525_15010 SM00487 DEAD-like helicases superfamily BM525_15010 SM00490 helicase superfamily c-terminal domain BM525_15015 SM00052 Putative diguanylate phosphodiesterase BM525_15015 SM00267 diguanylate cyclase BM525_15015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_15035 SM00710 Parallel beta-helix repeats BM525_15040 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM525_15040 SM00895 BM525_15040 BM525_15065 SM00155 Phospholipase D. Active site motifs. BM525_15095 SM00448 cheY-homologous receiver domain BM525_15105 SM00387 Histidine kinase-like ATPases BM525_15110 SM00849 Metallo-beta-lactamase superfamily BM525_15115 SM00486 DNA polymerase type-B family BM525_15150 SM00360 RNA recognition motif BM525_15185 SM00986 Uracil DNA glycosylase superfamily BM525_15185 SM00987 UreE urease accessory protein, C-terminal domain BM525_15190 SM00052 Putative diguanylate phosphodiesterase BM525_15190 SM00267 diguanylate cyclase BM525_15190 SM00448 cheY-homologous receiver domain BM525_15270 SM00640 Glycosyl hydrolases family 32 BM525_15325 SM00173 Ras subfamily of RAS small GTPases BM525_15325 SM00175 Rab subfamily of small GTPases BM525_15330 SM00052 Putative diguanylate phosphodiesterase BM525_15330 SM00267 diguanylate cyclase BM525_15340 SM00563 Phosphate acyltransferases BM525_15345 SM00563 Phosphate acyltransferases BM525_15470 SM00052 Putative diguanylate phosphodiesterase BM525_15470 SM00267 diguanylate cyclase BM525_15490 SM00849 Metallo-beta-lactamase superfamily BM525_15530 SM00530 Helix-turn-helix XRE-family like proteins BM525_15550 SM00903 Flavin reductase like domain BM525_15585 SM00100 Cyclic nucleotide-monophosphate binding domain BM525_15620 SM00354 helix_turn _helix lactose operon repressor BM525_15625 SM00849 Metallo-beta-lactamase superfamily BM525_15675 SM00900 BM525_15675 BM525_15760 SM00028 Tetratricopeptide repeats BM525_15770 SM00267 diguanylate cyclase BM525_15770 SM00448 cheY-homologous receiver domain BM525_15775 SM00479 BM525_15775 BM525_15780 SM00116 Domain in cystathionine beta-synthase and other proteins. BM525_15795 SM00387 Histidine kinase-like ATPases BM525_15795 SM00388 His Kinase A (phosphoacceptor) domain BM525_15795 SM00448 cheY-homologous receiver domain BM525_15825 SM00421 helix_turn_helix, Lux Regulon BM525_15825 SM00448 cheY-homologous receiver domain BM525_15850 SM01358 BM525_15850 BM525_15865 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM525_15865 SM00240 Forkhead associated domain BM525_15870 SM00028 Tetratricopeptide repeats BM525_15870 SM00220 Serine/Threonine protein kinases, catalytic domain BM525_15875 SM00387 Histidine kinase-like ATPases BM525_15880 SM00421 helix_turn_helix, Lux Regulon BM525_15880 SM00448 cheY-homologous receiver domain BM525_15900 SM00887 Ethylbenzene dehydrogenase BM525_15915 SM00248 ankyrin repeats BM525_15920 SM01060 BM525_15920 BM525_15995 SM00984 UDP binding domain BM525_16075 SM00858 BM525_16075 BM525_16125 SM00662 RNA polymerases D BM525_16130 SM00363 S4 RNA-binding domain BM525_16130 SM01390 BM525_16130 BM525_16195 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BM525_16200 SM01374 BM525_16200 BM525_16205 SM00387 Histidine kinase-like ATPases BM525_16205 SM00388 His Kinase A (phosphoacceptor) domain BM525_16205 SM00448 cheY-homologous receiver domain BM525_16220 SM00967 RNA 2'-O ribose methyltransferase substrate binding BM525_16225 SM00316 Ribosomal protein S1-like RNA-binding domain BM525_16225 SM00357 Cold shock protein domain BM525_16225 SM00955 BM525_16225 BM525_16260 SM00671 Sel1-like repeats. BM525_16285 SM00060 Fibronectin type 3 domain BM525_16295 SM00387 Histidine kinase-like ATPases BM525_16295 SM00388 His Kinase A (phosphoacceptor) domain BM525_16295 SM00448 cheY-homologous receiver domain BM525_16325 SM00344 helix_turn_helix ASNC type BM525_16335 SM00357 Cold shock protein domain BM525_16365 SM00448 cheY-homologous receiver domain BM525_16375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_16375 SM00387 Histidine kinase-like ATPases BM525_16375 SM00388 His Kinase A (phosphoacceptor) domain BM525_16380 SM00448 cheY-homologous receiver domain BM525_16390 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BM525_16445 SM00382 ATPases associated with a variety of cellular activities BM525_16450 SM00421 helix_turn_helix, Lux Regulon BM525_16465 SM00640 Glycosyl hydrolases family 32 BM525_16470 SM00354 helix_turn _helix lactose operon repressor BM525_16480 SM00640 Glycosyl hydrolases family 32 BM525_16500 SM00382 ATPases associated with a variety of cellular activities BM525_16500 SM01086 C-terminal, D2-small domain, of ClpB protein BM525_16510 SM00357 Cold shock protein domain BM525_16520 SM00487 DEAD-like helicases superfamily BM525_16520 SM00490 helicase superfamily c-terminal domain BM525_16535 SM00919 Malic enzyme, NAD binding domain BM525_16535 SM01274 BM525_16535 BM525_16585 SM00052 Putative diguanylate phosphodiesterase BM525_16600 SM00382 ATPases associated with a variety of cellular activities BM525_16605 SM00382 ATPases associated with a variety of cellular activities BM525_16605 SM00962 SRP54-type protein, GTPase domain BM525_16605 SM00963 SRP54-type protein, helical bundle domain BM525_16675 SM00052 Putative diguanylate phosphodiesterase BM525_16690 SM00382 ATPases associated with a variety of cellular activities BM525_16695 SM00448 cheY-homologous receiver domain BM525_16695 SM00862 Transcriptional regulatory protein, C terminal BM525_16700 SM00387 Histidine kinase-like ATPases BM525_16700 SM00388 His Kinase A (phosphoacceptor) domain BM525_16710 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM525_16730 SM00116 Domain in cystathionine beta-synthase and other proteins. BM525_16770 SM00838 Elongation factor G C-terminus BM525_16770 SM00889 Elongation factor G, domain IV BM525_16785 SM00663 RNA polymerase I subunit A N-terminus BM525_16810 SM00649 Ribosomal protein L11/L12 BM525_16830 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BM525_16830 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BM525_16845 SM00382 ATPases associated with a variety of cellular activities BM525_16865 SM00487 DEAD-like helicases superfamily BM525_16865 SM00490 helicase superfamily c-terminal domain BM525_16900 SM00642 Alpha-amylase domain BM525_16935 SM00487 DEAD-like helicases superfamily BM525_16935 SM00490 helicase superfamily c-terminal domain BM525_16940 SM00849 Metallo-beta-lactamase superfamily BM525_16950 SM00841 Elongation factor P, C-terminal BM525_16950 SM01185 BM525_16950 BM525_17025 SM00244 prohibitin homologues BM525_17030 SM00244 prohibitin homologues BM525_17050 SM01340 BM525_17050 BM525_17055 SM00257 Lysin motif BM525_17055 SM00646 BM525_17055 BM525_17115 SM00382 ATPases associated with a variety of cellular activities BM525_17150 SM00849 Metallo-beta-lactamase superfamily BM525_17155 SM00448 cheY-homologous receiver domain BM525_17155 SM00862 Transcriptional regulatory protein, C terminal BM525_17160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_17160 SM00387 Histidine kinase-like ATPases BM525_17160 SM00388 His Kinase A (phosphoacceptor) domain BM525_17200 SM00387 Histidine kinase-like ATPases BM525_17200 SM00388 His Kinase A (phosphoacceptor) domain BM525_17210 SM00382 ATPases associated with a variety of cellular activities BM525_17220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_17225 SM00387 Histidine kinase-like ATPases BM525_17230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM525_17260 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM525_17260 SM00866 BM525_17260 BM525_17320 SM00354 helix_turn _helix lactose operon repressor BM525_17330 SM00382 ATPases associated with a variety of cellular activities BM525_17335 SM00382 ATPases associated with a variety of cellular activities BM525_17360 SM00382 ATPases associated with a variety of cellular activities BM525_17485 SM00116 Domain in cystathionine beta-synthase and other proteins. BM525_17500 SM00867 YceI-like domain BM525_17530 SM00829 Enoylreductase BM525_17535 SM00267 diguanylate cyclase BM525_17540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_17540 SM00387 Histidine kinase-like ATPases BM525_17540 SM00388 His Kinase A (phosphoacceptor) domain BM525_17540 SM00448 cheY-homologous receiver domain BM525_17560 SM00420 helix_turn_helix, Deoxyribose operon repressor BM525_17560 SM01134 BM525_17560 BM525_17575 SM00267 diguanylate cyclase BM525_17590 SM00342 helix_turn_helix, arabinose operon control protein BM525_17590 SM01009 AlkA N-terminal domain BM525_17620 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BM525_17620 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BM525_17650 SM00965 Secretin and TonB N terminus short domain BM525_17695 SM00857 Resolvase, N terminal domain BM525_17725 SM00883 Chaperonin 10 Kd subunit BM525_17760 SM00878 Biotin carboxylase C-terminal domain BM525_17780 SM00479 BM525_17780 BM525_17780 SM00990 BM525_17780 BM525_17805 SM00062 Bacterial periplasmic substrate-binding proteins BM525_17825 SM00798 AICARFT/IMPCHase bienzyme BM525_17825 SM00851 MGS-like domain BM525_17835 SM01209 BM525_17835 BM525_17835 SM01210 BM525_17835 BM525_17870 SM00448 cheY-homologous receiver domain BM525_17870 SM00862 Transcriptional regulatory protein, C terminal BM525_17875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM525_17875 SM00387 Histidine kinase-like ATPases BM525_17875 SM00388 His Kinase A (phosphoacceptor) domain BM525_17970 SM00363 S4 RNA-binding domain BM525_17985 SM00382 ATPases associated with a variety of cellular activities BM525_18065 SM00867 YceI-like domain BM525_18100 SM00382 ATPases associated with a variety of cellular activities BM525_18120 SM00320 WD40 repeats BM525_18140 SM00316 Ribosomal protein S1-like RNA-binding domain BM525_18140 SM00732 Likely ribonuclease with RNase H fold. BM525_18170 SM00631 BM525_18170 BM525_18270 SM00563 Phosphate acyltransferases BM525_18290 SM00382 ATPases associated with a variety of cellular activities BM525_18355 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BM525_18470 SM00354 helix_turn _helix lactose operon repressor BM525_18485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM525_18495 SM01144 BM525_18495 BM525_18515 SM00382 ATPases associated with a variety of cellular activities BM525_18555 SM00470 ParB-like nuclease domain BM525_18570 SM01228 BM525_18570 BM525_18635 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BM525_18635 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BM525_18635 SM00493 BM525_18635 BM525_18945 SM00953 BM525_18945 BM525_19640 SM00248 ankyrin repeats BM525_19765 SM00491 BM525_19765 BM525_19770 SM01101 BM525_19770 BM525_19970 SM00480 DNA polymerase III beta subunit BM525_20245 SM00487 DEAD-like helicases superfamily BM525_20280 SM00530 Helix-turn-helix XRE-family like proteins BM525_20295 SM00382 ATPases associated with a variety of cellular activities BM525_20335 SM00481 DNA polymerase alpha chain like domain BM525_20365 SM00267 diguanylate cyclase BM525_20380 SM00422 helix_turn_helix, mercury resistance BM525_20380 SM00857 Resolvase, N terminal domain BM525_20440 SM00411 bacterial (prokaryotic) histone like domain BM525_20470 SM00034 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) BM525_20675 SM00974 BM525_20675 BM525_20740 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BM525_20780 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BM525_20780 SM00475 5'-3' exonuclease BM525_20900 SM00532 Ligase N family BM525_20905 SM00316 Ribosomal protein S1-like RNA-binding domain BM525_20905 SM00955 BM525_20905 BM525_20945 SM00434 DNA Topoisomerase IV BM525_20950 SM00387 Histidine kinase-like ATPases BM525_20950 SM00433 TopoisomeraseII BM525_20970 SM00382 ATPases associated with a variety of cellular activities BM525_21015 SM00382 ATPases associated with a variety of cellular activities BM525_21085 SM00530 Helix-turn-helix XRE-family like proteins BM525_21225 SM00670 Large family of predicted nucleotide-binding domains BM525_21245 SM00984 UDP binding domain BM525_21280 SM00892 DNA/RNA non-specific endonuclease BM525_21285 SM00736 Dystroglycan-type cadherin-like domains. BM525_21315 SM00382 ATPases associated with a variety of cellular activities BM525_21315 SM00448 cheY-homologous receiver domain BM525_21320 SM00387 Histidine kinase-like ATPases BM525_21345 SM00470 ParB-like nuclease domain BM525_21430 SM00028 Tetratricopeptide repeats BM525_21500 SM00267 diguanylate cyclase BM525_21525 SM00382 ATPases associated with a variety of cellular activities BM525_21655 SM00267 diguanylate cyclase BM525_21695 SM00671 Sel1-like repeats.